Psyllid ID: psy10063

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890----
Protein Sequence
MKRPILSSPLSVDRLNSMSPAARKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQPS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccHHHHHcccccccEEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccccEEccccccccccccccccccccccHHHcccccccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEcccccccccccccccccEEEcccccccEEEEcccccccEEEEEEEEEHHHHcccccccccccEEEEEccccccccccccccEEEEEEccccccccccccccccccccccEEcccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEccccccccccccHHHHHHHHccEEEEEEcccEEEEccccccccccccccccccccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccEEEccccccEEEEcccccccEEEEEEEEEHHHHcccccccccccEEEEEccccccccccccccEEEEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHEccccccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEcccccccccEEEccccccEEEEEccccEEEEEcccccEEEEEEEcccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEcccccEEcccccccEEEEccccccEEEEEEccccccEEEEEcccccEEEEEccccEEEEEEccccEEEEEccccccEEEEEcccccEEEEEccccEEEEEEEccccEEEEEcccccccEEcccccccEEEEccccEEEEEEEEcccEEEEEcccccccccccccEEEccccccEEEEccccccEEEcccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccccEEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccccEEEEEEccccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEcccccEEEEEEcccccEEEcccccEEEEEEEEEEcccccEEEEEccccccEEEEEccccccEEEEEEccccccEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEEEcccccccccccEEEEEcccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEccccEEEEEEcccccEEEccc
Coil and Loop (DISEMBL)
mkrpilssplsvdrlnsmspAARKLATVVVKARAFFslrdtntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntstststststnnqhqHQHQQQQLIHflssspilssplsvdrlnsmspaarklatnaepvvkMQVTDQSAKITSLLWGNLDQYIITGHakgdictwdlrmgrelesisghakepindmqfskdATMFITAshsqavepindmqfskDATMFITASKDHTAKLFTTHDRQLLKtytterpvnsaalspilphvvlgggqearevtttstkvgkfdarFYHLIFEEEFARIkghfgpinslafhpdgksyasggedgFLISNTlsngldisegsftssstqqpdglvypsqgghihslsshstsstdtggvfsgsrvddsgveltkDEQIEMARNRMSinhsgtrlhvnpfdeqqsvelTKDEQIEMARNRMSinhsgtrlhvnpfdeqqsvdasplmtwghiegtpfkldgsdtpilagpvdigfkmpeppkREKLALALADKVSERYRDRknkatagfllscpdflfdfdttrevtttstkvgkfdarFYHLIFEEEFARIkghfgpinslafhpdgksyasggedgfvRLHTFdqayfdytfdiseefhcqps
Flexible Loop (DISEMBL)
mkrpilssplsvdrlnsmspAARKLATVVVKARAffslrdtntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTttstkvgkfDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFsgsrvddsgveLTKDEQIEMARNRMSInhsgtrlhvnpfdeqqsvELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRknkatagfllscpDFLFDFDTTREvtttstkvgkfdaRFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQPS
Low Complexity Region (SEG)
MKRPILSSPLSVDRLNSMSPAARKLATVVVKARAFFSLRDtntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntntstststststnnqhqhqhqqqqLIHFlssspilssplsVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPsqgghihslsshstsstdtggVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDttrevtttstKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQPS
Disordered region (IsUnstruct)
************************LATVVVKARAFFSL*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL********************TMFITA***********MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA***EDGFLISN**************************************************************************************************************************************LMTWGHIEGTPFKLDGSDTPILAGPVDIGF***************************NKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEF*****
Disordered Region (DISOPRED)
****************************************************************************************************************************************************************************************************************************************************************************************************************TNTNTN*********************NTNTNTNTNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV****DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS********
Disordered Region (DISEMBL)
MKRPILSSPLSVDRLNSMSPAARKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN**************************IHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH****************VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQPS
Disordered Region (DISPRO)
**********SVDRLNSMSPAARKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQ*S
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRPILSSPLSVDRLNSMSPAARKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	894	2.2.26 [Sep-21-2011]
Q1HPW4	329	Eukaryotic translation in	N/A	N/A	0.192	0.522	0.608	3e-70
Q16K15	326	Eukaryotic translation in	N/A	N/A	0.197	0.542	0.600	8e-66
B3MVL6	322	Eukaryotic translation in	N/A	N/A	0.193	0.537	0.608	9e-66
B3N4C7	326	Eukaryotic translation in	N/A	N/A	0.194	0.533	0.615	1e-65
B4NW98	322	Eukaryotic translation in	N/A	N/A	0.194	0.540	0.615	1e-65
B4I195	326	Eukaryotic translation in	N/A	N/A	0.194	0.533	0.615	1e-65
O02195	326	Eukaryotic translation in	yes	N/A	0.194	0.533	0.615	1e-65
B4KGX9	322	Eukaryotic translation in	N/A	N/A	0.193	0.537	0.603	3e-65
B4Q354	326	Eukaryotic translation in	N/A	N/A	0.194	0.533	0.61	3e-65
B4LUA5	322	Eukaryotic translation in	N/A	N/A	0.194	0.540	0.595	3e-65

>sp|Q1HPW4|EIF3I_BOMMO Eukaryotic translation initiation factor 3 subunit I OS=Bombyx mori PE=2 SV=1

 Score =  267 bits (682), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 148/199 (74%), Gaps = 27/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P++K ++TD  +K+TS++WG+LD+ IITGH  GD+  WDLR G+++ S+  H  +     
Sbjct: 139 PILKWEITD--SKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQ----- 191

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                               I DMQ S+D TMF+TASKDHTAKLF T+  +LLK Y TER
Sbjct: 192 --------------------ITDMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTER 231

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAALSPIL HVVLGGGQ+A EVTTTST+ GKFDARF+HL+FEEEF R+KGHFGPINS
Sbjct: 232 PVNSAALSPILDHVVLGGGQDAMEVTTTSTRQGKFDARFFHLVFEEEFGRVKGHFGPINS 291

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDG++
Sbjct: 292 LAFHPDGKSYASGGEDGYV 310

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.
Bombyx mori (taxid: 7091)

>sp|Q16K15|EIF3I_AEDAE Eukaryotic translation initiation factor 3 subunit I OS=Aedes aegypti GN=AAEL013144 PE=3 SV=1

 Score =  252 bits (644), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 122/203 (60%), Positives = 144/203 (70%), Gaps = 26/203 (12%)

Query: 395 TNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEP 454
           +N  PV+K+ +  QS KITS+LWG LD+ +ITGH  G I  WDLR  +EL S++ H    
Sbjct: 135 SNQSPVLKLTMNQQS-KITSMLWGALDETVITGHENGSIRIWDLRAAKELNSVNDHT--- 190

Query: 455 INDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY 514
           +N                      INDMQ S D TM ++ASKD TAKLF +     LKTY
Sbjct: 191 LN----------------------INDMQLSSDGTMLVSASKDATAKLFDSESLMCLKTY 228

Query: 515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG 574
            TERPVNSAA+SPI  HVVLGGGQEA EVTTTSTK GKFD+RF+HL++EEEFAR+KGHFG
Sbjct: 229 KTERPVNSAAISPIHEHVVLGGGQEAMEVTTTSTKAGKFDSRFFHLVYEEEFARVKGHFG 288

Query: 575 PINSLAFHPDGKSYASGGEDGFL 597
           PINSLAFHPDGKSYA+GGEDGF+
Sbjct: 289 PINSLAFHPDGKSYATGGEDGFV 311

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Aedes aegypti (taxid: 7159)

>sp|B3MVL6|EIF3I_DROAN Eukaryotic translation initiation factor 3 subunit I OS=Drosophila ananassae GN=Trip1 PE=3 SV=2

 Score =  252 bits (644), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 143/199 (71%), Gaps = 26/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G++               
Sbjct: 135 PTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQK--------------- 177

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                    +  S S     INDMQ SKD TMF+TASKD TAKLF +     LKTY TER
Sbjct: 178 ---------VVDSGSDHTAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTER 228

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPINS
Sbjct: 229 PVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINS 288

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDGF+
Sbjct: 289 LAFHPDGKSYASGGEDGFV 307

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila ananassae (taxid: 7217)

>sp|B3N4C7|EIF3I_DROER Eukaryotic translation initiation factor 3 subunit I OS=Drosophila erecta GN=Trip1 PE=3 SV=1

 Score =  252 bits (643), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 146/200 (73%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G+++   SG        
Sbjct: 138 EPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVD-SG-------- 186

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HS     INDMQ SKD TMF+TASKD TAKLF +     LKTY TE
Sbjct: 187 ------------TDHSAG---INDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTE 231

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPI+ HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 232 RPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 291

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 292 SLAFHPDGKSYASGGEDGFV 311

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila erecta (taxid: 7220)

>sp|B4NW98|EIF3I_DROYA Eukaryotic translation initiation factor 3 subunit I OS=Drosophila yakuba GN=Trip1 PE=3 SV=2

 Score =  252 bits (643), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 146/200 (73%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G+++   SG        
Sbjct: 134 EPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVD-SG-------- 182

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HS     INDMQ SKD TMF+TASKD TAKLF +     LK+Y TE
Sbjct: 183 ------------TDHSAG---INDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKSYKTE 227

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 228 RPVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 287

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 288 SLAFHPDGKSYASGGEDGFV 307

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila yakuba (taxid: 7245)

>sp|B4I195|EIF3I_DROSE Eukaryotic translation initiation factor 3 subunit I OS=Drosophila sechellia GN=Trip1 PE=3 SV=1

 Score =  251 bits (642), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 146/200 (73%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G+++   SG        
Sbjct: 138 EPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVD-SG-------- 186

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HS     INDMQ SKD TMF+TASKD TAKLF +     LKTY TE
Sbjct: 187 ------------TDHSAG---INDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTE 231

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPI+ HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 232 RPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 291

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 292 SLAFHPDGKSYASGGEDGFV 311

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila sechellia (taxid: 7238)

>sp|O02195|EIF3I_DROME Eukaryotic translation initiation factor 3 subunit I OS=Drosophila melanogaster GN=Trip1 PE=1 SV=1

 Score =  251 bits (642), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 146/200 (73%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G+++   SG        
Sbjct: 138 EPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVD-SG-------- 186

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HS     INDMQ SKD TMF+TASKD TAKLF +     LKTY TE
Sbjct: 187 ------------TDHSAG---INDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTE 231

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPI+ HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 232 RPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 291

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 292 SLAFHPDGKSYASGGEDGFV 311

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila melanogaster (taxid: 7227)

>sp|B4KGX9|EIF3I_DROMO Eukaryotic translation initiation factor 3 subunit I OS=Drosophila mojavensis GN=Trip1 PE=3 SV=1

 Score =  251 bits (640), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/199 (60%), Positives = 142/199 (71%), Gaps = 26/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P +++ + +  +KITS+LWG LD+ IITGH  G+I  WD+R G++               
Sbjct: 135 PTLRIPMVE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQK--------------- 177

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                    +  S S     INDMQ SKD TMF+TASKD TAKLF +     LKTY TER
Sbjct: 178 ---------VVDSGSDHTAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTER 228

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPINS
Sbjct: 229 PVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINS 288

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDGF+
Sbjct: 289 LAFHPDGKSYASGGEDGFV 307

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila mojavensis (taxid: 7230)

>sp|B4Q354|EIF3I_DROSI Eukaryotic translation initiation factor 3 subunit I OS=Drosophila simulans GN=Trip1 PE=3 SV=1

 Score =  250 bits (639), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 122/200 (61%), Positives = 146/200 (73%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G+++   SG        
Sbjct: 138 EPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVD-SG-------- 186

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HS     INDMQ SKD TMF+TAS+D TAKLF +     LKTY TE
Sbjct: 187 ------------TDHSAG---INDMQLSKDGTMFVTASRDTTAKLFDSESLMCLKTYKTE 231

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPI+ HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 232 RPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 291

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 292 SLAFHPDGKSYASGGEDGFV 311

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila simulans (taxid: 7240)

>sp|B4LUA5|EIF3I_DROVI Eukaryotic translation initiation factor 3 subunit I OS=Drosophila virilis GN=Trip1 PE=3 SV=2

 Score =  250 bits (639), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/200 (59%), Positives = 143/200 (71%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ + +  +KITS+LWG LD+ IITGH  G+I  WD+R G++              
Sbjct: 134 EPTLRIPMVE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQK-------------- 177

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                     +  S +     INDMQ SKD TMF+TAS+D TAKLF +     LKTY TE
Sbjct: 178 ----------VVDSGTDHTAGINDMQLSKDGTMFVTASRDTTAKLFDSESLMCLKTYKTE 227

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 228 RPVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 287

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 288 SLAFHPDGKSYASGGEDGFV 307

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.

Drosophila virilis (taxid: 7244)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	894
114051800	329	eukaryotic translation initiation factor	0.192	0.522	0.608	2e-68
389608955	329	eukaryotic translation initiation factor	0.192	0.522	0.618	4e-68
357603675	325	eukaryotic translation initiation factor	0.192	0.529	0.608	7e-68
332374828	326	unknown [Dendroctonus ponderosae]	0.193	0.530	0.59	1e-65
91080113	326	PREDICTED: similar to eukaryotic transla	0.196	0.539	0.556	3e-64
157134639	326	eukaryotic translation initiation factor	0.197	0.542	0.600	5e-64
289743371	325	eukaryotic translation initiation factor	0.203	0.56	0.592	6e-64
224488069	322	RecName: Full=Eukaryotic translation ini	0.193	0.537	0.608	6e-64
194856381	326	GG24335 [Drosophila erecta] gi|224488054	0.194	0.533	0.615	8e-64
194766069	332	GF23646 [Drosophila ananassae] gi|190617	0.193	0.521	0.608	8e-64

>gi|114051800|ref|NP_001040433.1| eukaryotic translation initiation factor 3 subunit I [Bombyx mori] gi|121958921|sp|Q1HPW4.1|EIF3I_BOMMO RecName: Full=Eukaryotic translation initiation factor 3 subunit I; Short=eIF3i gi|95102872|gb|ABF51377.1| eukaryotic translation initiation factor 3 subunit 2 beta [Bombyx mori]

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 148/199 (74%), Gaps = 27/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P++K ++TD  +K+TS++WG+LD+ IITGH  GD+  WDLR G+++ S+  H  +     
Sbjct: 139 PILKWEITD--SKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQ----- 191

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                               I DMQ S+D TMF+TASKDHTAKLF T+  +LLK Y TER
Sbjct: 192 --------------------ITDMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKTER 231

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAALSPIL HVVLGGGQ+A EVTTTST+ GKFDARF+HL+FEEEF R+KGHFGPINS
Sbjct: 232 PVNSAALSPILDHVVLGGGQDAMEVTTTSTRQGKFDARFFHLVFEEEFGRVKGHFGPINS 291

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDG++
Sbjct: 292 LAFHPDGKSYASGGEDGYV 310

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608955|dbj|BAM18089.1| eukaryotic translation initiation factor 3 subunit I [Papilio xuthus]

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 123/199 (61%), Positives = 146/199 (73%), Gaps = 27/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P++K ++TD  +K+TS++WG LD+ IITGH  GD+  WDLR G+++ SI  H  +     
Sbjct: 139 PILKWEITD--SKVTSMVWGTLDETIITGHEAGDLIQWDLRTGKKVHSIKEHNHQ----- 191

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                               INDMQ S+D TMFITASKD TAKLF T   +LLK Y TER
Sbjct: 192 --------------------INDMQLSRDGTMFITASKDQTAKLFDTSSLELLKEYKTER 231

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAALSPIL HVVLGGGQ+A EVTTTST+ GKFDARF+HL+FEEEF R+KGHFGPINS
Sbjct: 232 PVNSAALSPILDHVVLGGGQDAMEVTTTSTRQGKFDARFFHLVFEEEFGRVKGHFGPINS 291

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDG++
Sbjct: 292 LAFHPDGKSYASGGEDGYV 310

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357603675|gb|EHJ63876.1| eukaryotic translation initiation factor 3 subunit I [Danaus plexippus]

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 146/199 (73%), Gaps = 27/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P++K ++TD  +K+TS++WG LD+ IITGH  GD+  WDLR G+++ S+  H  +     
Sbjct: 135 PILKWEITD--SKVTSMVWGTLDETIITGHEAGDLIQWDLRTGKKVHSVKEHTHQ----- 187

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                               INDMQ S+D TMFITASKD TAKLF T   +LLK Y TER
Sbjct: 188 --------------------INDMQLSRDGTMFITASKDQTAKLFDTSSLELLKEYKTER 227

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAALSPIL HVVLGGGQ+A EVTTTST+ GKFDARF+HL+FEEEF R+KGHFGPINS
Sbjct: 228 PVNSAALSPILDHVVLGGGQDAMEVTTTSTRQGKFDARFFHLVFEEEFGRVKGHFGPINS 287

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKS+ASGGEDG++
Sbjct: 288 LAFHPDGKSFASGGEDGYI 306

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374828|gb|AEE62555.1| unknown [Dendroctonus ponderosae]

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 118/200 (59%), Positives = 148/200 (74%), Gaps = 27/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP++++ ++   ++++S+LW NLD+ +I+GH  G+I  WDL+ G++L SI+         
Sbjct: 138 EPILRIPIS--GSRVSSILWDNLDETLISGHENGEIIQWDLKTGKKLNSIT--------- 186

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HSQ    INDMQ++KD TMFITASKDHTAKLF      LLKTY TE
Sbjct: 187 -------------EHSQL---INDMQWNKDCTMFITASKDHTAKLFDAQKLMLLKTYKTE 230

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPI  HVVLGGGQEA EVTTTST+ GKFD+RF+HL+FEEEF R+KGHFGPIN
Sbjct: 231 RPVNSAAISPIAEHVVLGGGQEAMEVTTTSTRAGKFDSRFFHLVFEEEFGRVKGHFGPIN 290

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           S+AFHPDGKSYASGGEDG++
Sbjct: 291 SVAFHPDGKSYASGGEDGYV 310

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080113|ref|XP_967415.1| PREDICTED: similar to eukaryotic translation initiation factor 3 subunit 2 beta [Tribolium castaneum] gi|270003188|gb|EEZ99635.1| hypothetical protein TcasGA2_TC002391 [Tribolium castaneum]

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 113/203 (55%), Positives = 149/203 (73%), Gaps = 27/203 (13%)

Query: 395 TNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEP 454
           ++A+P++++ +  + ++++S+LW NLD+ IITGH  GD+  WDL+ G+E+ S        
Sbjct: 135 SHADPILRIPI--KGSRVSSILWDNLDETIITGHENGDLIKWDLKSGKEISS-------- 184

Query: 455 INDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY 514
                         T  H      INDMQ++KD TMF+TASKDHTAKLF   D  LLKTY
Sbjct: 185 --------------TREHEHL---INDMQWNKDGTMFVTASKDHTAKLFDAADLMLLKTY 227

Query: 515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG 574
            TERPVNSAA+SPI  HVV+GGGQ+A +VTTTS +VGKFD+RF+H++FEEEF R+KGHFG
Sbjct: 228 KTERPVNSAAISPIFEHVVVGGGQDAMDVTTTSARVGKFDSRFFHMVFEEEFGRVKGHFG 287

Query: 575 PINSLAFHPDGKSYASGGEDGFL 597
           PINS+AFHPDGKSY+SGGEDG++
Sbjct: 288 PINSVAFHPDGKSYSSGGEDGYV 310

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157134639|ref|XP_001656392.1| eukaryotic translation initiation factor 3 subunit [Aedes aegypti] gi|122104887|sp|Q16K15.1|EIF3I_AEDAE RecName: Full=Eukaryotic translation initiation factor 3 subunit I; Short=eIF3i gi|108870412|gb|EAT34637.1| AAEL013144-PA [Aedes aegypti]

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 122/203 (60%), Positives = 144/203 (70%), Gaps = 26/203 (12%)

Query: 395 TNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEP 454
           +N  PV+K+ +  QS KITS+LWG LD+ +ITGH  G I  WDLR  +EL S++ H    
Sbjct: 135 SNQSPVLKLTMNQQS-KITSMLWGALDETVITGHENGSIRIWDLRAAKELNSVNDHT--- 190

Query: 455 INDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY 514
           +N                      INDMQ S D TM ++ASKD TAKLF +     LKTY
Sbjct: 191 LN----------------------INDMQLSSDGTMLVSASKDATAKLFDSESLMCLKTY 228

Query: 515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG 574
            TERPVNSAA+SPI  HVVLGGGQEA EVTTTSTK GKFD+RF+HL++EEEFAR+KGHFG
Sbjct: 229 KTERPVNSAAISPIHEHVVLGGGQEAMEVTTTSTKAGKFDSRFFHLVYEEEFARVKGHFG 288

Query: 575 PINSLAFHPDGKSYASGGEDGFL 597
           PINSLAFHPDGKSYA+GGEDGF+
Sbjct: 289 PINSLAFHPDGKSYATGGEDGFV 311

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289743371|gb|ADD20433.1| eukaryotic translation initiation factor 3 subunit 2 beta [Glossina morsitans morsitans]

 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 125/211 (59%), Positives = 150/211 (71%), Gaps = 29/211 (13%)

Query: 394 ATNAE--PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA 451
           AT A+  P++++ +    +KITS+LWG LD+ IITGH  G +  WD+R GRE+ S++ H 
Sbjct: 132 ATTADQSPILRLPML--QSKITSMLWGPLDETIITGHDNGQLSIWDVRKGREVNSVNDH- 188

Query: 452 KEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL 511
                            TA        INDMQ  KD TMF+TASKD +AKLF +     L
Sbjct: 189 -----------------TAG-------INDMQMYKDGTMFVTASKDTSAKLFDSETLMCL 224

Query: 512 KTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG 571
           KTY TERPVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KG
Sbjct: 225 KTYKTERPVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKG 284

Query: 572 HFGPINSLAFHPDGKSYASGGEDGFLISNTL 602
           HFGPINSLAFHPDGKS+ASGGEDGF+  NT 
Sbjct: 285 HFGPINSLAFHPDGKSFASGGEDGFVRVNTF 315

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|224488069|sp|B3MVL6.2|EIF3I_DROAN RecName: Full=Eukaryotic translation initiation factor 3 subunit I; Short=eIF3i; AltName: Full=Eukaryotic translation initiation factor 3 subunit 2; AltName: Full=TRIP-1 homolog

 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 143/199 (71%), Gaps = 26/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G++               
Sbjct: 135 PTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQK--------------- 177

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                    +  S S     INDMQ SKD TMF+TASKD TAKLF +     LKTY TER
Sbjct: 178 ---------VVDSGSDHTAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTER 228

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPINS
Sbjct: 229 PVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINS 288

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDGF+
Sbjct: 289 LAFHPDGKSYASGGEDGFV 307

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194856381|ref|XP_001968738.1| GG24335 [Drosophila erecta] gi|224488054|sp|B3N4C7.1|EIF3I_DROER RecName: Full=Eukaryotic translation initiation factor 3 subunit I; Short=eIF3i; AltName: Full=Eukaryotic translation initiation factor 3 subunit 2; AltName: Full=TRIP-1 homolog gi|190660605|gb|EDV57797.1| GG24335 [Drosophila erecta]

 Score =  252 bits (643), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 146/200 (73%), Gaps = 26/200 (13%)

Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIND 457
           EP +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G+++   SG        
Sbjct: 138 EPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVD-SG-------- 186

Query: 458 MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE 517
                         HS     INDMQ SKD TMF+TASKD TAKLF +     LKTY TE
Sbjct: 187 ------------TDHSAG---INDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTE 231

Query: 518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN 577
           RPVNSAA+SPI+ HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPIN
Sbjct: 232 RPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPIN 291

Query: 578 SLAFHPDGKSYASGGEDGFL 597
           SLAFHPDGKSYASGGEDGF+
Sbjct: 292 SLAFHPDGKSYASGGEDGFV 311

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194766069|ref|XP_001965147.1| GF23646 [Drosophila ananassae] gi|190617757|gb|EDV33281.1| GF23646 [Drosophila ananassae]

 Score =  252 bits (643), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 121/199 (60%), Positives = 143/199 (71%), Gaps = 26/199 (13%)

Query: 399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM 458
           P +++ +T+  +KITS+LWG LD+ IITGH  G+I  WD+R G++               
Sbjct: 145 PTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQK--------------- 187

Query: 459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER 518
                    +  S S     INDMQ SKD TMF+TASKD TAKLF +     LKTY TER
Sbjct: 188 ---------VVDSGSDHTAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTER 238

Query: 519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS 578
           PVNSAA+SPIL HVVLGGGQ+A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPINS
Sbjct: 239 PVNSAAISPILDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINS 298

Query: 579 LAFHPDGKSYASGGEDGFL 597
           LAFHPDGKSYASGGEDGF+
Sbjct: 299 LAFHPDGKSYASGGEDGFV 317

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	894
FB|FBgn0015834	326	Trip1 "Trip1" [Drosophila mela	0.140	0.386	0.769	9.8e-68
UNIPROTKB|B5FZ19	325	EIF3I "Eukaryotic translation	0.165	0.455	0.642	3.3e-47
UNIPROTKB|E1C6T8	325	EIF3I "Uncharacterized protein	0.165	0.455	0.642	3.3e-47
RGD|1560498	325	Eif3i-ps1 "eukaryotic translat	0.165	0.455	0.615	1.8e-46
UNIPROTKB|Q13347	325	EIF3I "Eukaryotic translation	0.165	0.455	0.615	2.3e-46
MGI|MGI:1860763	325	Eif3i "eukaryotic translation	0.165	0.455	0.615	2.3e-46
UNIPROTKB|F1SV90	325	EIF3I "Uncharacterized protein	0.165	0.455	0.615	3.8e-46
UNIPROTKB|F1PPR0	325	EIF3I "Uncharacterized protein	0.165	0.455	0.615	3.8e-46
UNIPROTKB|Q5E966	325	EIF3I "Eukaryotic translation	0.165	0.455	0.615	3.8e-46
UNIPROTKB|Q5EBE8	325	eif3i "Eukaryotic translation	0.165	0.455	0.609	7.9e-46

FB|FBgn0015834 Trip1 "Trip1" [Drosophila melanogaster (taxid:7227)]

 Score = 514 (186.0 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
 Identities = 97/126 (76%), Positives = 108/126 (85%)

Query:   479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ 538
             INDMQ SKD TMF+TASKD TAKLF +     LKTY TERPVNSAA+SPI+ HVVLGGGQ
Sbjct:   193 INDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQ 252

Query:   539 EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLI 598
             +A EVTTTSTK GKFD+RF+HLI+EEEFAR+KGHFGPINSLAFHPDGKSYASGGEDGF+ 
Sbjct:   253 DAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVR 312

Query:   599 SNTLSN 604
               T  +
Sbjct:   313 VQTFDS 318

GO:0003743 "translation initiation factor activity" evidence=ISS;NAS

GO:0006412 "translation" evidence=ISS;NAS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS;NAS

GO:0005829 "cytosol" evidence=NAS

GO:0006413 "translational initiation" evidence=ISS

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|B5FZ19 EIF3I "Eukaryotic translation initiation factor 3 subunit I" [Taeniopygia guttata (taxid:59729)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 97/151 (64%), Positives = 120/151 (79%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N  QFS  +   ++ +  +  + IND+Q S+D TMFITASKD+TAKLF   
Sbjct:   162 IAGHENGELN--QFSAKSGEQLS-NIKEHTKQINDIQTSRDMTMFITASKDNTAKLFDCT 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               + LKT+ TERPVNSAALSPI  HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 SLKHLKTFRTERPVNSAALSPIFDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

UNIPROTKB|E1C6T8 EIF3I "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 97/151 (64%), Positives = 120/151 (79%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N  QFS  +   ++ +  +  + IND+Q S+D TMFITASKD+TAKLF   
Sbjct:   162 IAGHESGELN--QFSAKSGEQLS-NIKEHTKQINDIQTSRDMTMFITASKDNTAKLFDCT 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               + LKT+ TERPVNSAALSPI  HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 TLEHLKTFRTERPVNSAALSPIFDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IEA

GO:0006413 "translational initiation" evidence=IEA

RGD|1560498 Eif3i-ps1 "eukaryotic translation initiation factor 3, subunit I, pseudogene 1" [Rattus norvegicus (taxid:10116)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 93/151 (61%), Positives = 114/151 (75%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N         +     HS+    IND+Q S+D TMF+TASKD+TAKLF + 
Sbjct:   162 IAGHESGELNQYSAKSGEVLVNVKEHSRQ---INDIQLSRDMTMFVTASKDNTAKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAALSP   HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 SLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

UNIPROTKB|Q13347 EIF3I "Eukaryotic translation initiation factor 3 subunit I" [Homo sapiens (taxid:9606)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 93/151 (61%), Positives = 114/151 (75%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N         +     HS+    IND+Q S+D TMF+TASKD+TAKLF + 
Sbjct:   162 IAGHESGELNQYSAKSGEVLVNVKEHSRQ---INDIQLSRDMTMFVTASKDNTAKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAALSP   HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 TLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0006413 "translational initiation" evidence=IC;IDA;TAS

GO:0003743 "translation initiation factor activity" evidence=IC;IDA

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0006412 "translation" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1860763 Eif3i "eukaryotic translation initiation factor 3, subunit I" [Mus musculus (taxid:10090)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 93/151 (61%), Positives = 114/151 (75%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N         +     HS+    IND+Q S+D TMF+TASKD+TAKLF + 
Sbjct:   162 IAGHESGELNQYSAKSGEVLVNVKEHSRQ---INDIQLSRDMTMFVTASKDNTAKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAALSP   HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 TLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0003743 "translation initiation factor activity" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISO;IDA

GO:0006412 "translation" evidence=IEA

GO:0006413 "translational initiation" evidence=ISO;IDA

UNIPROTKB|F1SV90 EIF3I "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 93/151 (61%), Positives = 114/151 (75%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N         +     HS+    IND+Q S+D TMF+TASKD+TAKLF + 
Sbjct:   162 IAGHEGGELNQYSAKSGEVLVNVKEHSRQ---INDIQLSRDMTMFVTASKDNTAKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAALSP   HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 TLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0006413 "translational initiation" evidence=IEA

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IEA

UNIPROTKB|F1PPR0 EIF3I "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 93/151 (61%), Positives = 114/151 (75%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N         +     HS+    IND+Q S+D TMF+TASKD+TAKLF + 
Sbjct:   162 IAGHEGGELNQYSAKSGEVLVNVKEHSRQ---INDIQLSRDMTMFVTASKDNTAKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAALSP   HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 TLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0006413 "translational initiation" evidence=IEA

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=IEA

UNIPROTKB|Q5E966 EIF3I "Eukaryotic translation initiation factor 3 subunit I" [Bos taurus (taxid:9913)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 93/151 (61%), Positives = 114/151 (75%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N         +     HS+    IND+Q S+D TMF+TASKD+TAKLF + 
Sbjct:   162 IAGHEGGELNQYSAKSGEVLVNVKEHSRQ---INDIQLSRDMTMFVTASKDNTAKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAALSP   HVVLGGGQEA +VTTTST++GKF+ARF+HL FEEEF
Sbjct:   219 TLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINS+AFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSVAFHPDGKSYSSGGEDGYV 309

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

UNIPROTKB|Q5EBE8 eif3i "Eukaryotic translation initiation factor 3 subunit I" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 92/151 (60%), Positives = 118/151 (78%)

Query:   447 ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH 506
             I+GH    +N  Q+S  +   + +    + + IND+Q S+D TMF+TASKD T+KLF + 
Sbjct:   162 IAGHENGELN--QYSAKSGEIVNSIKEHSKQ-INDIQTSRDMTMFVTASKDCTSKLFDST 218

Query:   507 DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
               +  KT+ TERPVNSAA+SPI  HVVLGGGQEA +VTTTST++GKF+ARF+H+ FEEEF
Sbjct:   219 SLEHQKTFRTERPVNSAAISPIYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHVAFEEEF 278

Query:   567 ARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
              R+KGHFGPINSLAFHPDGKSY+SGGEDG++
Sbjct:   279 GRVKGHFGPINSLAFHPDGKSYSSGGEDGYV 309

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7PP77	EIF3I_ANOGA	No assigned EC number	0.5517	0.1991	0.5443	yes	N/A
Q5EBE8	EIF3I_XENTR	No assigned EC number	0.53	0.1935	0.5323	yes	N/A
B0BNA7	EIF3I_RAT	No assigned EC number	0.53	0.1935	0.5323	yes	N/A
Q5R7R2	EIF3I_PONAB	No assigned EC number	0.5346	0.1912	0.5261	yes	N/A
B5FZ19	EIF3I_TAEGU	No assigned EC number	0.555	0.1935	0.5323	yes	N/A
O02195	EIF3I_DROME	No assigned EC number	0.615	0.1946	0.5337	yes	N/A
Q9QZD9	EIF3I_MOUSE	No assigned EC number	0.5346	0.1912	0.5261	yes	N/A
Q13347	EIF3I_HUMAN	No assigned EC number	0.5396	0.1912	0.5261	yes	N/A
Q5IH81	EIF3I_RABIT	No assigned EC number	0.5099	0.1912	0.5135	yes	N/A
Q5E966	EIF3I_BOVIN	No assigned EC number	0.5346	0.1912	0.5261	yes	N/A
Q29L19	EIF3I_DROPS	No assigned EC number	0.605	0.1923	0.5276	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	894
pfam09751	390	pfam09751, Es2, Nuclear protein Es2	2e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-15
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-15
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	5e-12
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	8e-12
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	1e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	7e-11
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	1e-10
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	1e-10
PHA02584	1229	PHA02584, 34, long tail fiber, proximal subunit; P	1e-10
PHA02584	1229	PHA02584, 34, long tail fiber, proximal subunit; P	4e-10
PRK08581	619	PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami	5e-10
PHA02584	1229	PHA02584, 34, long tail fiber, proximal subunit; P	6e-10
PHA02584	1229	PHA02584, 34, long tail fiber, proximal subunit; P	7e-10
PHA02584	1229	PHA02584, 34, long tail fiber, proximal subunit; P	1e-08
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	9e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	1e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	2e-06
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	3e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	4e-06
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	4e-06
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	4e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	5e-06
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	5e-06
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	6e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	6e-06
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	9e-06
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	9e-06
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	1e-05
smart00320	40	smart00320, WD40, WD40 repeats	1e-05
COG3468	592	COG3468, AidA, Type V secretory pathway, adhesin A	1e-05
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	3e-05
COG3468	592	COG3468, AidA, Type V secretory pathway, adhesin A	3e-05
PRK08026	529	PRK08026, PRK08026, flagellin; Validated	4e-05
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	5e-05
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	5e-05
PRK08026	529	PRK08026, PRK08026, flagellin; Validated	5e-05
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	6e-05
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	6e-05
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	6e-05
TIGR04056	982	TIGR04056, OMP_RagA_SusC, TonB-linked outer membra	6e-05
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	7e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-05
PTZ00112	1164	PTZ00112, PTZ00112, origin recognition complex 1 p	1e-04
COG3468	592	COG3468, AidA, Type V secretory pathway, adhesin A	1e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-04
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	2e-04
COG5295	715	COG5295, Hia, Autotransporter adhesin [Intracellul	2e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-04
COG3468	592	COG3468, AidA, Type V secretory pathway, adhesin A	2e-04
COG3468	592	COG3468, AidA, Type V secretory pathway, adhesin A	2e-04
TIGR04056	982	TIGR04056, OMP_RagA_SusC, TonB-linked outer membra	2e-04
pfam02956	525	pfam02956, TT_ORF1, TT viral orf 1	2e-04
pfam06873	407	pfam06873, SerH, Cell surface immobilisation antig	2e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-04
PRK13914	481	PRK13914, PRK13914, invasion associated secreted e	3e-04
smart00320	40	smart00320, WD40, WD40 repeats	3e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-04
COG3468	592	COG3468, AidA, Type V secretory pathway, adhesin A	5e-04
PRK07133	725	PRK07133, PRK07133, DNA polymerase III subunits ga	5e-04
PRK06347	592	PRK06347, PRK06347, autolysin; Reviewed	6e-04
pfam06873	407	pfam06873, SerH, Cell surface immobilisation antig	7e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.001
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.002
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.002
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.002
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.003
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG1749	423	COG1749, FlgE, Flagellar hook protein FlgE [Cell m	0.004
COG3889	872	COG3889, COG3889, Predicted solute binding protein	0.004

>gnl|CDD|220380 pfam09751, Es2, Nuclear protein Es2

 Score = 94.5 bits (235), Expect = 2e-20
 Identities = 52/151 (34%), Positives = 69/151 (45%), Gaps = 16/151 (10%)

Query: 658 SGVELTKDEQIEMARNRMSINHSGTRLH--VNPFDEQQSVELTKDEQIEMARNRMSINHS 715
            GVE +  E I+ A     I H  TR     NPF +  S    ++     AR +      
Sbjct: 217 DGVEDSPLETIQAAARAPEIVHKNTRFSQEYNPFPKSPSKSAIQEAIAGKARAKDGEVGE 276

Query: 716 GTRLH----------VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFK 765
             +            V+       VD SPLMTWG I+GTP +LDGSDT    GP    FK
Sbjct: 277 DGKGSETPRVNGYAFVDTPSPAPGVDESPLMTWGEIDGTPLRLDGSDTGSTTGP---SFK 333

Query: 766 MPEPPKREKLALALADKVSE-RYRDRKNKAT 795
           +PEP +REKLA  L +K +  + R++   A 
Sbjct: 334 IPEPSRREKLAHKLVEKAARAKRREKAKGAL 364

This entry is of a family of proteins of approximately 500 residues with alternating regions of low complexity and conservation where the domain similarities are strong. Apart from a predicted coiled-coil domain, no other known functional domains have been characterized. The protein appears to be expressed in the nucleus and particularly highly in the pons sub-region of the brain. The protein is clearly necessary for normal development of the nervous system. Length = 390

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 77.0 bits (190), Expect = 3e-15
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 34/203 (16%)

Query: 412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS 471
           ++S+ +    + + +      I  WD+  G+ L ++ GH  + +N + FS D T   ++S
Sbjct: 96  VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH-TDWVNSVAFSPDGTFVASSS 154

Query: 472 HSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT 513
               +                    +N + FS D    +++S D T KL+     + L T
Sbjct: 155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGT 214

Query: 514 YTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH 572
               E  VNS A SP   +++  G ++           G    R + L   E    + GH
Sbjct: 215 LRGHENGVNSVAFSPD-GYLLASGSED-----------GTI--RVWDLRTGECVQTLSGH 260

Query: 573 FGPINSLAFHPDGKSYASGGEDG 595
              + SLA+ PDGK  ASG  DG
Sbjct: 261 TNSVTSLAWSPDGKRLASGSADG 283

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 75.4 bits (186), Expect = 8e-15
 Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 40/209 (19%)

Query: 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI 468
           +  +T + +    + + TG   G I  WDL  G  L ++ GH   P+ D+  S D T   
Sbjct: 9   TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGH-TGPVRDVAASADGTYLA 67

Query: 469 TAS---------------------HSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHD 507
           + S                     H+  V   + + FS D  +  ++S+D T K++    
Sbjct: 68  SGSSDKTIRLWDLETGECVRTLTGHTSYV---SSVAFSPDGRILSSSSRDKTIKVWDVET 124

Query: 508 RQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF 566
            + L T       VNS A SP     V    Q+       + K+  +D R    +     
Sbjct: 125 GKCLTTLRGHTDWVNSVAFSPD-GTFVASSSQD------GTIKL--WDLRTGKCV----- 170

Query: 567 ARIKGHFGPINSLAFHPDGKSYASGGEDG 595
           A + GH G +NS+AF PDG+   S   DG
Sbjct: 171 ATLTGHTGEVNSVAFSPDGEKLLSSSSDG 199

Length = 289

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 69.0 bits (169), Expect = 5e-12
 Identities = 34/260 (13%), Positives = 102/260 (39%), Gaps = 2/260 (0%)

Query: 105 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 164
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 165 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 224
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 225 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 283
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 284 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTST 343
            +N+   ++   N  +++  N + + +   +     + +         + +    T TS 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 344 STSTSTSTNNQHQHQHQQQQ 363
           + +    T ++ +H+ +  Q
Sbjct: 261 TKNPQLPTQDELKHKSKPAQ 280

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 68.7 bits (168), Expect = 8e-12
 Identities = 37/276 (13%), Positives = 103/276 (37%), Gaps = 2/276 (0%)

Query: 75  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 134
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 135 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 194
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 195 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 253
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 254 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 313
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 314 NTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTST 349
             N    T       +    +   + N S + STS 
Sbjct: 261 TKNPQLPTQDELKHKSKPAQSFENDVNQSNTRSTSL 296

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 67.9 bits (166), Expect = 1e-11
 Identities = 37/277 (13%), Positives = 103/277 (37%), Gaps = 2/277 (0%)

Query: 69  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 128
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 129 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 188
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 189 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 248
            +  +  ++N N++++   +T+T ++   +   N    ++ NT  +T+     +      
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQ-DKADNQKAPSSNNTKPSTSNKQPNSPKPTQP 199

Query: 249 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 308
             +N+   ++   N  +++  N + + +   +     + +         + +    T T+
Sbjct: 200 NQSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETS 259

Query: 309 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTST 345
              N    T       +    +   + N +   STS 
Sbjct: 260 NTKNPQLPTQDELKHKSKPAQSFENDVNQSNTRSTSL 296

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 41  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 100
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 101 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 160
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 161 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 219
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 220 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 279
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 280 NTN 282
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 43  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 102
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 103 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 162
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 163 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 221
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 222 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 281
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 282 NTN 284
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 45  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 104
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 105 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 164
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 165 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 223
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 224 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 283
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 284 NTN 286
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 47  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 106
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 107 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 166
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 167 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 225
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 226 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 285
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 286 NTN 288
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 49  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 108
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 109 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 168
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 169 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 227
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 228 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 287
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 288 NTN 290
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 51  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 110
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 111 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 170
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 171 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 229
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 230 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 289
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 290 NTN 292
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 53  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 112
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 113 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 172
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 173 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 231
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 232 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 291
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 292 NTN 294
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 55  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 114
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 115 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 174
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 175 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 233
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 234 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 293
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 294 NTN 296
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 57  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 116
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 117 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 176
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 177 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 235
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 236 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 295
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 296 NTN 298
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 65.6 bits (160), Expect = 7e-11
 Identities = 31/243 (12%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 59  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 118
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI 81

Query: 119 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 178
            ++ +++N   +        TN N     N   + N +  T      N N++ +      
Sbjct: 82  DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 179 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 237
            +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +       
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 238 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 297
            +N+   ++   N  +++  N + + +   +     + +         + +    T T+ 
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 298 NTN 300
             N
Sbjct: 261 TKN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 64.8 bits (158), Expect = 1e-10
 Identities = 31/242 (12%), Positives = 92/242 (38%), Gaps = 2/242 (0%)

Query: 40  DTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 99
            T    +   ++   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T  
Sbjct: 23  PTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTID 82

Query: 100 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 159
           ++ +++N   +        TN N     N   + N +  T      N N++ +       
Sbjct: 83  SSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPRN 141

Query: 160 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTN 218
           +  +  ++N N++++   +T+T ++     +     ++ NT  +T+     +        
Sbjct: 142 SEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQ 201

Query: 219 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 278
           +N+   ++   N  +++  N + + +   +     + +         + +    T T+  
Sbjct: 202 SNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSNT 261

Query: 279 TN 280
            N
Sbjct: 262 KN 263

Length = 619

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 64.4 bits (157), Expect = 1e-10
 Identities = 31/235 (13%), Positives = 91/235 (38%), Gaps = 2/235 (0%)

Query: 37  SLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 96
             +D+   T ++ +  +N +  +   ++ +T+   N NT+   N +   +T  ++ +++N
Sbjct: 30  PQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTIDSSTSDSN 89

Query: 97  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 156
              +        TN N     N   + N +  T      N N++ +       +  +  +
Sbjct: 90  NIIDFIYKNLPQTNINQLLTKNKYDD-NYSLTTLIQNLFNLNSDISDYEQPRNSEKSTND 148

Query: 157 TNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 215
           +N N++++   +T+T ++     +     ++ NT  +T+     +        +N+   +
Sbjct: 149 SNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPAS 208

Query: 216 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 270
           +   N  +++  N + + +   +     + +         + +    T T+   N
Sbjct: 209 DDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSNTKN 263

Length = 619

>gnl|CDD|222890 PHA02584, 34, long tail fiber, proximal subunit; Provisional

 Score = 65.2 bits (159), Expect = 1e-10
 Identities = 42/276 (15%), Positives = 70/276 (25%), Gaps = 2/276 (0%)

Query: 36   FSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 95
            F  RD +   N +     NTN +    +++      +   N+   T   +N        T
Sbjct: 898  FIRRDIDQTVNGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVVVVDET 957

Query: 96   NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 155
            +    +  NT  N   N +   +        T   T   TN              TN   
Sbjct: 958  SIAFYSQNNTTGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVY-AEGGGIARTNNAA 1016

Query: 156  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 215
               T   T  N  + T        +     N    +    N N     N N   N     
Sbjct: 1017 RAITGGFTIRNDGSTTVFLLTAAGDQTGGFN-GLKSLIINNANGQVTINDNYIINAGGTI 1075

Query: 216  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 275
             +   T  +   +  T  +       +T    + + N +   N             +  T
Sbjct: 1076 MSGGLTVNSRIRSQGTKASYTRAPTADTVGFWSVDINDSATYNQFPGYFQMVTKTKSPGT 1135

Query: 276  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 311
             T      ++     +     T        N N  T
Sbjct: 1136 LTQFGNTLDSLYQDWSPDGRTTRYTRTWQKNKNAWT 1171

Length = 1229

>gnl|CDD|222890 PHA02584, 34, long tail fiber, proximal subunit; Provisional

 Score = 63.6 bits (155), Expect = 4e-10
 Identities = 37/265 (13%), Positives = 64/265 (24%)

Query: 80   NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 139
            N +     NTN +    +++      +   N+   T   +N        T+    +  NT
Sbjct: 908  NGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVVVVDETSIAFYSQNNT 967

Query: 140  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 199
              N   N +   +        T   T   TN               N             
Sbjct: 968  TGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVYAEGGGIARTNNAARAITGGFTIRN 1027

Query: 200  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 259
            + +T     T     T       +    N N     N N   N      +   T  +   
Sbjct: 1028 DGSTTVFLLTAAGDQTGGFNGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNSRIR 1087

Query: 260  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 319
            +  T  +       +T    + + N +   N             +  T T      ++  
Sbjct: 1088 SQGTKASYTRAPTADTVGFWSVDINDSATYNQFPGYFQMVTKTKSPGTLTQFGNTLDSLY 1147

Query: 320  NTNTNTNTNTNTNTNTNTNTNTSTS 344
               +     T        N N  TS
Sbjct: 1148 QDWSPDGRTTRYTRTWQKNKNAWTS 1172

Length = 1229

>gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated

 Score = 62.9 bits (153), Expect = 5e-10
 Identities = 31/254 (12%), Positives = 101/254 (39%), Gaps = 1/254 (0%)

Query: 113 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 172
           + T    +   ++   T ++ +  +N +  +   ++ +T+   N N  +N + N    + 
Sbjct: 22  SPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNN-TSNQDNNDKKFST 80

Query: 173 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 232
            +++T+ + N       N          T    + N +  T      N N++ +      
Sbjct: 81  IDSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPR 140

Query: 233 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 292
            +  +  ++N N++++   +T+T ++     +     ++N    + +N   N+   T  N
Sbjct: 141 NSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPN 200

Query: 293 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTN 352
            + +   + +T    +++ +  + +++  ++  +  +     T  +  + +    + ++N
Sbjct: 201 QSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSN 260

Query: 353 NQHQHQHQQQQLIH 366
            ++     Q +L H
Sbjct: 261 TKNPQLPTQDELKH 274

Length = 619

>gnl|CDD|222890 PHA02584, 34, long tail fiber, proximal subunit; Provisional

 Score = 62.9 bits (153), Expect = 6e-10
 Identities = 35/266 (13%), Positives = 64/266 (24%)

Query: 102  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 161
            N +     NTN +    +++      +   N+   T   +N        T+    +  NT
Sbjct: 908  NGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVVVVDETSIAFYSQNNT 967

Query: 162  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 221
              N   N +   +        T   T   TN               N             
Sbjct: 968  TGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVYAEGGGIARTNNAARAITGGFTIRN 1027

Query: 222  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 281
            + +T     T     T       +    N N     N N   N      +   T  +   
Sbjct: 1028 DGSTTVFLLTAAGDQTGGFNGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNSRIR 1087

Query: 282  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 341
            +  T  +       +T    + + N +   N             +  T T      ++  
Sbjct: 1088 SQGTKASYTRAPTADTVGFWSVDINDSATYNQFPGYFQMVTKTKSPGTLTQFGNTLDSLY 1147

Query: 342  STSTSTSTSTNNQHQHQHQQQQLIHF 367
               +    +T      Q  +     F
Sbjct: 1148 QDWSPDGRTTRYTRTWQKNKNAWTSF 1173

Length = 1229

>gnl|CDD|222890 PHA02584, 34, long tail fiber, proximal subunit; Provisional

 Score = 62.9 bits (153), Expect = 7e-10
 Identities = 36/264 (13%), Positives = 63/264 (23%)

Query: 60   NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 119
            N +     NTN +    +++      +   N+   T   +N        T+    +  NT
Sbjct: 908  NGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVVVVDETSIAFYSQNNT 967

Query: 120  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 179
              N   N +   +        T   T   TN               N             
Sbjct: 968  TGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVYAEGGGIARTNNAARAITGGFTIRN 1027

Query: 180  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 239
            + +T     T     T       +    N N     N N   N      +   T  +   
Sbjct: 1028 DGSTTVFLLTAAGDQTGGFNGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNSRIR 1087

Query: 240  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 299
            +  T  +       +T    + + N +   N             +  T T      ++  
Sbjct: 1088 SQGTKASYTRAPTADTVGFWSVDINDSATYNQFPGYFQMVTKTKSPGTLTQFGNTLDSLY 1147

Query: 300  NTNTNTNTNTNTNTNTNTNTNTNT 323
               +     T        N N  T
Sbjct: 1148 QDWSPDGRTTRYTRTWQKNKNAWT 1171

Length = 1229

>gnl|CDD|222890 PHA02584, 34, long tail fiber, proximal subunit; Provisional

 Score = 58.6 bits (142), Expect = 1e-08
 Identities = 34/256 (13%), Positives = 57/256 (22%)

Query: 26   ATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 85
             T +       S      +   N+   T   +N        T+    +  NT  N   N 
Sbjct: 916  NTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVVVVDETSIAFYSQNNTTGNIVFNI 975

Query: 86   NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 145
            +   +        T   T   TN               N             + +T    
Sbjct: 976  DGTVDPINVNANGTLNATGVATNGRAVYAEGGGIARTNNAARAITGGFTIRNDGSTTVFL 1035

Query: 146  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 205
             T     T       +    N N     N N   N      +   T  +   +  T  + 
Sbjct: 1036 LTAAGDQTGGFNGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNSRIRSQGTKASY 1095

Query: 206  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 265
                  +T    + + N +   N             +  T T      ++     +    
Sbjct: 1096 TRAPTADTVGFWSVDINDSATYNQFPGYFQMVTKTKSPGTLTQFGNTLDSLYQDWSPDGR 1155

Query: 266  NTNTNTNTNTNTNTNT 281
             T        N N  T
Sbjct: 1156 TTRYTRTWQKNKNAWT 1171

Length = 1229

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 52.1 bits (124), Expect = 9e-07
 Identities = 40/94 (42%), Positives = 50/94 (53%)

Query: 258 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 317
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 318 NTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTST 351
           + NTNTNTN+NTNTN+NTN N  +S + S S+++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSSAS 367

Length = 481

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 50.8 bits (122), Expect = 1e-06
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 19/98 (19%)

Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------- 476
           +++  + G I  WDL  G+ L ++ GH +  +N + FS D  +  + S    +       
Sbjct: 192 LLSSSSDGTIKLWDLSTGKCLGTLRGH-ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT 250

Query: 477 -----------EPINDMQFSKDATMFITASKDHTAKLF 503
                        +  + +S D     + S D T +++
Sbjct: 251 GECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 51.7 bits (123), Expect = 1e-06
 Identities = 39/95 (41%), Positives = 51/95 (53%)

Query: 252 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 311
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 312 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTS 346
           + NTNTNTN+NTNTN+NTN N  ++ N + S++++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSSASA 368

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 51.0 bits (121), Expect = 2e-06
 Identities = 42/95 (44%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 250 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 309
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 310 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTS 344
           + NTNTNTN+NTNTN+NTN N  + +N N+N+S S
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGS-SNNNSNSSAS 367

Length = 481

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 51.0 bits (122), Expect = 3e-06
 Identities = 47/349 (13%), Positives = 100/349 (28%), Gaps = 10/349 (2%)

Query: 15  LNSMSPAARKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 74
           LN+ +    K  T +  A    ++     +   +   + +TN + +     +T    + +
Sbjct: 42  LNAKALGGGKEVTALGGALNSGAVSLGTLSVVGDGGKDGSTNGDNSLGLTQDTGAAVSAS 101

Query: 75  TNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTN 132
                        N +T     +   N+ T   + ++T     T     T  T   +  +
Sbjct: 102 KGEVITNVAAGLKNVDTMNVIVSIILNSGTGAASASSTLAAGTTIRAVATGKTAVLSTAS 161

Query: 133 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNT 191
            +      T++                               TN   ++ T+  N +T  
Sbjct: 162 ASGVQAKATDSALGFENTAVDQQAGAAGLGNAAENADTNEARTNDLGDSLTDDGNQSTIA 221

Query: 192 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTN 250
             +      TN+  N   N+      +   +  T  T   +   +  N  T      NT 
Sbjct: 222 VGSVGLKAGTNSVANAAGNSTDAAIGSGLQSVLTAATAQGSAALSGGNNGTAVIGKNNTL 281

Query: 251 TNTNTNTNTN-----TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 305
           + T+   +               + +  +  T+    T   T      +  + T T  + 
Sbjct: 282 SGTSGANSIAAAAGSNGDTAIVASGSLASATTDVALQTAAGTTVTNGVSLGSATETAADV 341

Query: 306 NTNTNTNTNTNTNTNTN-TNTNTNTNTNTNTNTNTNTSTSTSTSTSTNN 353
              TN   N          N NT     +N+  N N+ ++   +   + 
Sbjct: 342 KDVTNDGLNAGAIVKVGLANGNTVVGDLSNSKDNLNSISAGGNNKVFHA 390

Length = 715

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 4e-06
 Identities = 41/110 (37%), Positives = 53/110 (48%)

Query: 30  VKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 89
           VK  A  + +        NTNTNT T     T T   T     T         +      
Sbjct: 256 VKTEAPAAEKQAAPVVKENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNAN 315

Query: 90  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 139
            TNTNTNTNTN    +  + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 316 KTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 50.4 bits (120), Expect = 4e-06
 Identities = 40/291 (13%), Positives = 104/291 (35%), Gaps = 1/291 (0%)

Query: 60  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTN 118
           N  + T    N N  T    N     N +++++++ +++    +  ++ T+  +  +N+ 
Sbjct: 95  NERSKTPIKNNDNVTTPIKANKKEKHNLDSSSSSSISSSLTNISFFSSPTSIYSCLSNSL 154

Query: 119 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 178
           ++ ++      N +T+ N +++ +      +N      TN    T  +    +  NT+T 
Sbjct: 155 SSKHSPKVIKENQSTHVNISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTI 214

Query: 179 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 238
            N   + N   N   + N   + + +  T  N+  +   N++ +     +       +  
Sbjct: 215 KNNTNDKNKEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKDEK 274

Query: 239 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 298
              +   ++      +     ++   +N      T    N     N ++N+N +  +++N
Sbjct: 275 NVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDTSSSN 334

Query: 299 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTST 349
              +   +    ++      T  +TN   N   N    T          +T
Sbjct: 335 HLGSNRISNRNPSSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHAT 385

Length = 1164

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 50.2 bits (119), Expect = 4e-06
 Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 1/277 (0%)

Query: 69  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 128
           T  N   +  T   T T TN  T T+          T +     T  +   +  T   T 
Sbjct: 393 TVANPVADAKTLIITRTATNATTTTHKVVFHKAPDTTKSVIFVYTLVHVEPHKTTAVPTT 452

Query: 129 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 188
            +    +   T +  +  + T T T ++T     + T+  T+   N  + T   T  N  
Sbjct: 453 PSLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSPTSRTTSATPNATSPTPAVTTPNAT 512

Query: 189 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 248
           + T   T ++T   T+        T T T+  T T +  N  +   T  +   NTNT   
Sbjct: 513 SPTTQKT-SDTPNATSPTPIVIGVTTTATSPPTGTTSVPNATSPQVTEESPVNNTNTPVV 571

Query: 249 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 308
           T+  +   +   T  +   ++ T+      +++++   +N+ + T   T+ +     N  
Sbjct: 572 TSAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSSHSTPRSNSTSTTPLLTSAHPTGGENIT 631

Query: 309 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTST 345
             T +  +T   +  +      T +  +   N+STS 
Sbjct: 632 EETPSVPSTTHVSTLSPGPGPGTTSQVSGPGNSSTSR 668

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 58  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 117
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 118 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 149
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 60  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 119
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 120 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 151
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 62  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 121
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 122 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 153
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 64  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 123
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 124 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 155
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 66  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 125
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 126 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 157
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 68  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 127
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 128 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 159
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 70  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 129
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 130 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 161
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 72  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 131
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 132 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 163
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 74  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 133
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 134 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 165
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 76  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 135
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 136 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 167
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 78  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 137
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 138 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 169
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 80  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 139
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 140 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 171
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 82  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 141
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 142 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 173
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 84  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 143
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 144 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 175
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 86  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 145
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 146 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 177
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 88  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 147
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 148 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 179
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 90  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 149
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 150 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 181
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 92  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 151
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 152 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 183
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 94  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 153
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 154 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 185
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 96  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 155
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 156 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 187
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 98  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 157
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 158 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 189
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 100 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 159
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 160 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 191
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 102 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 161
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 162 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 193
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 104 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 163
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 164 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 195
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 106 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 165
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 166 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 197
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 108 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 167
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 168 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 199
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 110 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 169
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 170 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 201
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 112 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 171
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 172 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 203
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 114 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 173
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 174 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 205
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 116 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 175
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 176 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 207
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 118 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 177
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 178 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 209
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 120 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 179
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 180 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 211
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 122 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 181
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 182 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 213
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 124 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 183
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 184 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 215
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 126 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 185
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 186 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 217
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 128 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 187
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 188 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 219
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 130 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 189
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 190 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 221
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 132 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 191
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 192 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 223
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 134 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 193
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 194 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 225
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 136 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 195
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 196 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 227
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 138 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 197
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 198 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 229
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 140 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 199
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 200 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 231
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 142 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 201
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 202 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 233
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 144 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 203
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 204 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 235
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 146 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 205
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 206 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 237
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 148 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 207
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 208 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 239
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 150 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 209
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 210 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 241
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 152 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 211
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 212 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 243
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 154 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 213
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 214 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 245
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 156 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 215
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 216 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 247
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 158 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 217
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 218 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 249
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 160 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 219
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 220 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 251
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 162 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 221
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 222 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 253
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 164 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 223
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 224 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 255
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 166 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 225
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 226 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 257
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 168 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 227
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 228 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 259
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 170 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 229
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 230 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 261
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 172 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 231
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 232 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 263
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 174 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 233
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 234 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 265
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 176 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 235
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 236 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 267
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 178 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 237
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 238 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 269
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 180 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 239
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 240 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 271
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 182 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 241
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 242 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 273
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 184 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 243
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 244 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 275
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 186 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 245
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 246 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 277
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 188 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 247
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 248 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 279
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 190 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 249
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 250 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 281
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 192 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 251
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 252 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 283
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 194 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 253
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 254 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 285
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 196 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 255
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 256 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 287
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 198 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 257
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 258 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 289
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 200 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 259
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 260 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 291
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 202 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 261
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 262 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 293
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 204 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 263
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 264 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 295
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 206 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 265
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 266 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 297
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 208 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 267
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 268 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 299
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 210 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 269
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 270 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 301
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 212 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 271
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 272 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 303
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 214 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 273
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 274 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 305
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 216 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 275
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 276 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 307
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 218 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 277
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 278 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 309
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 220 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 279
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 280 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 311
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 222 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 281
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 282 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 313
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 224 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 283
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 284 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 315
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 226 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 285
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 286 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 317
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 228 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 287
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 288 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 319
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 230 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 289
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 290 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 321
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 232 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 291
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 292 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 323
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 234 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 293
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 294 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 325
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 236 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 295
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 296 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 327
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 238 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 297
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 298 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 329
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 49.8 bits (118), Expect = 5e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%)

Query: 240 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 299
           NTNTNT T     T T   T     T         +       TNTNTNTNTN    +  
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTP 333

Query: 300 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 331
           + NTNTNTN+NTNTN+NTN N  ++ N + ++
Sbjct: 334 SKNTNTNTNSNTNTNSNTNANQGSSNNNSNSS 365

Length = 481

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 50.4 bits (120), Expect = 5e-06
 Identities = 42/304 (13%), Positives = 109/304 (35%), Gaps = 1/304 (0%)

Query: 52  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTN 110
           N  + T    N N  T    N     N +++++++ +++    +  ++ T+  +  +N+ 
Sbjct: 95  NERSKTPIKNNDNVTTPIKANKKEKHNLDSSSSSSISSSLTNISFFSSPTSIYSCLSNSL 154

Query: 111 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 170
           ++ ++      N +T+ N +++ +      +N      TN    T  +    +  NT+T 
Sbjct: 155 SSKHSPKVIKENQSTHVNISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTI 214

Query: 171 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 230
            N   + N   N   + N   + + +  T  N+  +   N++ +     +       +  
Sbjct: 215 KNNTNDKNKEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKDEK 274

Query: 231 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 290
              +   ++      +     ++   +N      T    N     N ++N+N +  +++N
Sbjct: 275 NVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDTSSSN 334

Query: 291 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTS 350
              +   +    ++      T  +TN   N   N    T    +   +  T    S+   
Sbjct: 335 HLGSNRISNRNPSSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHATINKRSSMLP 394

Query: 351 TNNQ 354
            + Q
Sbjct: 395 MSEQ 398

Length = 1164

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 49.8 bits (118), Expect = 6e-06
 Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 1/277 (0%)

Query: 75  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 134
           T  N   +  T   T T TN  T T+          T +     T  +   +  T   T 
Sbjct: 393 TVANPVADAKTLIITRTATNATTTTHKVVFHKAPDTTKSVIFVYTLVHVEPHKTTAVPTT 452

Query: 135 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 194
            +    +   T +  +  + T T T ++T     + T+  T+   N  + T   T  N  
Sbjct: 453 PSLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSPTSRTTSATPNATSPTPAVTTPNAT 512

Query: 195 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 254
           + T   T ++T   T+        T T T+  T T +  N  +   T  +   NTNT   
Sbjct: 513 SPTTQKT-SDTPNATSPTPIVIGVTTTATSPPTGTTSVPNATSPQVTEESPVNNTNTPVV 571

Query: 255 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 314
           T+  +   +   T  +   ++ T+      +++++   +N+ + T   T+ +     N  
Sbjct: 572 TSAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSSHSTPRSNSTSTTPLLTSAHPTGGENIT 631

Query: 315 TNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTST 351
             T +  +T   +  +      T +  S   ++STS 
Sbjct: 632 EETPSVPSTTHVSTLSPGPGPGTTSQVSGPGNSSTSR 668

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.5 bits (103), Expect = 6e-06
 Identities = 18/31 (58%), Positives = 23/31 (74%)

Query: 841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRL 871
           +KGH GP+ S+AF PDG   ASG +DG VR+
Sbjct: 7   LKGHTGPVTSVAFSPDGNLLASGSDDGTVRV 37

Length = 39

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 49.6 bits (118), Expect = 9e-06
 Identities = 43/321 (13%), Positives = 112/321 (34%), Gaps = 1/321 (0%)

Query: 50  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTN 108
           N  + T    N N  T    N     N +++++++ +++    +  ++ T+  +  +N+ 
Sbjct: 95  NERSKTPIKNNDNVTTPIKANKKEKHNLDSSSSSSISSSLTNISFFSSPTSIYSCLSNSL 154

Query: 109 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 168
           ++ ++      N +T+ N +++ +      +N      TN    T  +    +  NT+T 
Sbjct: 155 SSKHSPKVIKENQSTHVNISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTI 214

Query: 169 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 228
            N   + N   N   + N   + + +  T  N+  +   N++ +     +       +  
Sbjct: 215 KNNTNDKNKEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKDEK 274

Query: 229 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 288
              +   ++      +     ++   +N      T    N     N ++N+N +  +++N
Sbjct: 275 NVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDTSSSN 334

Query: 289 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTS 348
              +   +    ++      T  +TN   N   N    T    +   +  T    S+   
Sbjct: 335 HLGSNRISNRNPSSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHATINKRSSMLP 394

Query: 349 TSTNNQHQHQHQQQQLIHFLS 369
            S         + + +  F  
Sbjct: 395 MSEQKGRGASEKSEYIKEFTM 415

Length = 1164

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 49.2 bits (117), Expect = 9e-06
 Identities = 37/295 (12%), Positives = 105/295 (35%)

Query: 35  FFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 94
           +  L + +     N +  T          +   ++++++ +++ TN +  ++  +  +  
Sbjct: 91  YIDLNERSKTPIKNNDNVTTPIKANKKEKHNLDSSSSSSISSSLTNISFFSSPTSIYSCL 150

Query: 95  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 154
           +N+ ++ ++      N +T+ N +++ +      +N      TN    T  +    +  N
Sbjct: 151 SNSLSSKHSPKVIKENQSTHVNISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRN 210

Query: 155 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 214
           T+T  N   + N   N   + N   + + +  T  N+  +   N++ +     +      
Sbjct: 211 TSTIKNNTNDKNKEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENK 270

Query: 215 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 274
            +     +   ++      +     ++   +N      T    N     N ++N+N +  
Sbjct: 271 KDEKNVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDT 330

Query: 275 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 329
           +++N   +   +    ++      T  +TN   N   N    T    +   +  T
Sbjct: 331 SSSNHLGSNRISNRNPSSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHAT 385

Length = 1164

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 48.3 bits (115), Expect = 1e-05
 Identities = 39/295 (13%), Positives = 82/295 (27%), Gaps = 4/295 (1%)

Query: 50  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 109
           ++  N NT  +T   T+    T +   +  N +      +  N          T      
Sbjct: 1   SSLANDNTTGSTGIGTDAAAGTLSTVASGANVDAKGVGASALNAKALGGGKEVTALGGAL 60

Query: 110 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 169
           N+   +    +   +   + +TN + N+   T       + +     TN           
Sbjct: 61  NSGAVSLGTLSVVGDGGKDGSTNGD-NSLGLTQDTGAAVSASKGEVITNVAAGLKNVDTM 119

Query: 170 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTN 228
           N   +   N+ T   + ++T     T     T  T   +  + +      T++       
Sbjct: 120 NVIVSIILNSGTGAASASSTLAAGTTIRAVATGKTAVLSTASASGVQAKATDSALGFENT 179

Query: 229 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 287
                                   TN   ++ T+  N +T    +      TN+  N   
Sbjct: 180 AVDQQAGAAGLGNAAENADTNEARTNDLGDSLTDDGNQSTIAVGSVGLKAGTNSVANAAG 239

Query: 288 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTS 342
           N+      +   +      T   +   +  N  T      NT + T+   +   +
Sbjct: 240 NSTDAAIGSGLQSV-LTAATAQGSAALSGGNNGTAVIGKNNTLSGTSGANSIAAA 293

Length = 715

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 836 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLH 872
           E    +KGH GP+ S+AF PDGK  ASG +DG ++L 
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225999 COG3468, AidA, Type V secretory pathway, adhesin AidA [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]

 Score = 48.7 bits (116), Expect = 1e-05
 Identities = 42/319 (13%), Positives = 76/319 (23%), Gaps = 2/319 (0%)

Query: 37  SLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 96
             +  +     +       N +   N N           + N N  T T   T       
Sbjct: 63  KKQAFSQVGIVSGRGTVVLNGDQQINPNNLYFGFRGGRLDANGNNLTFTAIRTLDEGGNY 122

Query: 97  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 156
              N +      T T  ++ T+   + + NTN NT+   N    T   T       T   
Sbjct: 123 VGHNGSQADTV-TLTGDDSITDPLNSISGNTNGNTDVQVNNGGGTGDTTVNGGGLQTVGG 181

Query: 157 TNTNTNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 215
             +  NT      T  N +          T   T        N   N+    + +  T T
Sbjct: 182 GASAGNTTLAGGFTQVNGDGTVEAGAYDYTGRQTVHAGGLAGNWYLNSGGTLDGDWATRT 241

Query: 216 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 275
                      T            N     N   N            ++           
Sbjct: 242 FQAPGGAIVPGTAATVRPEAELGGNFTAENNALNNLGLENGGTLCVRSDATKTLVDAGGL 301

Query: 276 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 335
            +  +  TN     N+  + N +       +   +  +      +   N + +   +   
Sbjct: 302 LSVNDGGTNGLWLRNSGGHLNVSGGAALGGSGTNSNGSVFQLGGDQAQNLSLDGGLHLGV 361

Query: 336 NTNTNTSTSTSTSTSTNNQ 354
                 + +  TS   +  
Sbjct: 362 MAGYAKADTDVTSGLADGL 380

Length = 592

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 47.5 bits (112), Expect = 3e-05
 Identities = 54/305 (17%), Positives = 92/305 (30%)

Query: 97  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 156
           T  ++ TNT  N            T ++        T+         +     +  T   
Sbjct: 333 TMADSETNTAPNVTVTAFWAWGNVTQSDFKCKWVLATHGQNPEGCERSLGFFNSNRTFEV 392

Query: 157 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 216
           T  N   +  T   T T TN  T T+          T +     T  +   +  T   T 
Sbjct: 393 TVANPVADAKTLIITRTATNATTTTHKVVFHKAPDTTKSVIFVYTLVHVEPHKTTAVPTT 452

Query: 217 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 276
            +    +   T +  +  + T T T ++T     + T+  T+   N  + T   T  N  
Sbjct: 453 PSLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSPTSRTTSATPNATSPTPAVTTPNAT 512

Query: 277 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 336
           + T   T+   N  + T       T   +     T+    T+      +  N        
Sbjct: 513 SPTTQKTSDTPNATSPTPIVIGVTTTATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVT 572

Query: 337 TNTNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATN 396
           +  +  TS  T+           QQ  +     S+P  +S  +   L S  P   +  T 
Sbjct: 573 SAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITE 632

Query: 397 AEPVV 401
             P V
Sbjct: 633 ETPSV 637

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|225999 COG3468, AidA, Type V secretory pathway, adhesin AidA [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]

 Score = 47.1 bits (112), Expect = 3e-05
 Identities = 47/333 (14%), Positives = 80/333 (24%), Gaps = 3/333 (0%)

Query: 25  LATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 84
            A    K +AF  +   +       N +   N N           + N N  T T   T 
Sbjct: 57  QADENGKKQAFSQVGIVSGRGTVVLNGDQQINPNNLYFGFRGGRLDANGNNLTFTAIRTL 116

Query: 85  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 144
                    N +      T T  ++ T+   + + NTN NT+   N    T   T     
Sbjct: 117 DEGGNYVGHNGSQADTV-TLTGDDSITDPLNSISGNTNGNTDVQVNNGGGTGDTTVNGGG 175

Query: 145 TNTNTNTNTNTNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 203
             T     +  NT      T  N +          T   T        N   N+    + 
Sbjct: 176 LQTVGGGASAGNTTLAGGFTQVNGDGTVEAGAYDYTGRQTVHAGGLAGNWYLNSGGTLDG 235

Query: 204 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 263
           +  T T           T            N     N   N            ++     
Sbjct: 236 DWATRTFQAPGGAIVPGTAATVRPEAELGGNFTAENNALNNLGLENGGTLCVRSDATKTL 295

Query: 264 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNTNTN 322
                  +  +  TN     N+  + N +       + TN+N +            +   
Sbjct: 296 VDAGGLLSVNDGGTNGLWLRNSGGHLNVSGGAALGGSGTNSNGSVFQLGGDQAQNLSLDG 355

Query: 323 TNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQH 355
                        +T+  +  +          +
Sbjct: 356 GLHLGVMAGYAKADTDVTSGLADGLGADKTTGY 388

Length = 592

>gnl|CDD|236140 PRK08026, PRK08026, flagellin; Validated

 Score = 46.7 bits (111), Expect = 4e-05
 Identities = 27/215 (12%), Positives = 49/215 (22%), Gaps = 1/215 (0%)

Query: 139 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT- 197
           T ++      T   T        N    T        + +  T T T  +   N  +   
Sbjct: 187 TVSDLTAAGATLDTTGLYDVKTKNAALTTADALAKLGDGDKVTATATGGDYTYNAKSGKY 246

Query: 198 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 257
                  T T     T   + T  +     N +++       +      T   T  N   
Sbjct: 247 QAADLAATLTPDVGGTAGASYTIKDGTYEVNVDSDGKITLGGSALYIDATGNLTTNNAGA 306

Query: 258 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 317
            T    +    T +               T  +  T      +         +      T
Sbjct: 307 ATKATLDALKKTASEGAATAKAALAAAGVTVADGVTAKTVKMSYTDKNGKVIDGGYAVKT 366

Query: 318 NTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTN 352
             +             +  T   T+   +T T+ N
Sbjct: 367 GDDYYAADYDEITGAISATTTYYTAKDGTTKTAAN 401

Length = 529

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 46.8 bits (111), Expect = 5e-05
 Identities = 42/290 (14%), Positives = 83/290 (28%), Gaps = 4/290 (1%)

Query: 62  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 121
           ++  N NT  +T   T+    T +   +  N +      +  N          T      
Sbjct: 1   SSLANDNTTGSTGIGTDAAAGTLSTVASGANVDAKGVGASALNAKALGGGKEVTALGGAL 60

Query: 122 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 181
           N+   +    +   +   + +TN + N+   T       + +     TN           
Sbjct: 61  NSGAVSLGTLSVVGDGGKDGSTNGD-NSLGLTQDTGAAVSASKGEVITNVAAGLKNVDTM 119

Query: 182 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTN 240
           N   +   N+ T   + ++T     T     T  T   +  + +      T++       
Sbjct: 120 NVIVSIILNSGTGAASASSTLAAGTTIRAVATGKTAVLSTASASGVQAKATDSALGFENT 179

Query: 241 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 299
                                   TN   ++ T+  N +T    +      TN+  N   
Sbjct: 180 AVDQQAGAAGLGNAAENADTNEARTNDLGDSLTDDGNQSTIAVGSVGLKAGTNSVANAAG 239

Query: 300 NTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTS 348
           N+      +   +  T  T   +   +  N  T      NT + TS + S
Sbjct: 240 NSTDAAIGSGLQSVLTAATAQGSAALSGGNNGTAVIGKNNTLSGTSGANS 289

Length = 715

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 46.9 bits (111), Expect = 5e-05
 Identities = 35/279 (12%), Positives = 100/279 (35%)

Query: 23  RKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 82
                +    +   +L  +++++ +++ TN +  ++  +  +  +N+ ++ ++      N
Sbjct: 107 NVTTPIKANKKEKHNLDSSSSSSISSSLTNISFFSSPTSIYSCLSNSLSSKHSPKVIKEN 166

Query: 83  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 142
            +T+ N +++ +      +N      TN    T  +    +  NT+T  N   + N   N
Sbjct: 167 QSTHVNISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTIKNNTNDKNKEKN 226

Query: 143 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 202
              + N   + + +  T  N+  +   N++ +     +       +     +   ++   
Sbjct: 227 KEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKDEKNVVSGIRSSVLL 286

Query: 203 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 262
              +     ++   +N      T    N     N ++N+N +  +++N   +   +    
Sbjct: 287 KRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDTSSSNHLGSNRISNRNP 346

Query: 263 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 301
           ++      T  +TN   N   N    T    +   +  T
Sbjct: 347 SSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHAT 385

Length = 1164

>gnl|CDD|236140 PRK08026, PRK08026, flagellin; Validated

 Score = 46.7 bits (111), Expect = 5e-05
 Identities = 26/212 (12%), Positives = 47/212 (22%), Gaps = 1/212 (0%)

Query: 135 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT- 193
           T ++      T   T        N    T        + +  T T T  +   N  +   
Sbjct: 187 TVSDLTAAGATLDTTGLYDVKTKNAALTTADALAKLGDGDKVTATATGGDYTYNAKSGKY 246

Query: 194 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 253
                  T T     T   + T  +     N +++       +      T   T  N   
Sbjct: 247 QAADLAATLTPDVGGTAGASYTIKDGTYEVNVDSDGKITLGGSALYIDATGNLTTNNAGA 306

Query: 254 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 313
            T    +    T +               T  +  T      +         +      T
Sbjct: 307 ATKATLDALKKTASEGAATAKAALAAAGVTVADGVTAKTVKMSYTDKNGKVIDGGYAVKT 366

Query: 314 NTNTNTNTNTNTNTNTNTNTNTNTNTNTSTST 345
             +             +  T   T  + +T T
Sbjct: 367 GDDYYAADYDEITGAISATTTYYTAKDGTTKT 398

Length = 529

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 46.4 bits (110), Expect = 6e-05
 Identities = 37/273 (13%), Positives = 75/273 (27%), Gaps = 3/273 (1%)

Query: 84  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 143
           ++  N NT  +T   T+    T +   +  N +      +  N          T      
Sbjct: 1   SSLANDNTTGSTGIGTDAAAGTLSTVASGANVDAKGVGASALNAKALGGGKEVTALGGAL 60

Query: 144 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 203
           N+   +    +   +   + +TN + N+   T       + +     TN           
Sbjct: 61  NSGAVSLGTLSVVGDGGKDGSTNGD-NSLGLTQDTGAAVSASKGEVITNVAAGLKNVDTM 119

Query: 204 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTN 262
           N   +   N+ T   + ++T     T     T  T   +  + +      T++       
Sbjct: 120 NVIVSIILNSGTGAASASSTLAAGTTIRAVATGKTAVLSTASASGVQAKATDSALGFENT 179

Query: 263 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 321
                                   TN   ++ T+  N +T    +      TN+  N   
Sbjct: 180 AVDQQAGAAGLGNAAENADTNEARTNDLGDSLTDDGNQSTIAVGSVGLKAGTNSVANAAG 239

Query: 322 NTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQ 354
           N+      +   +  T      S + S   N  
Sbjct: 240 NSTDAAIGSGLQSVLTAATAQGSAALSGGNNGT 272

Length = 715

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 46.4 bits (110), Expect = 6e-05
 Identities = 41/302 (13%), Positives = 83/302 (27%), Gaps = 3/302 (0%)

Query: 42  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 101
           N +T    +      TN+  N   N+      +   +      T   +   +  N  T  
Sbjct: 216 NQSTIAVGSVGLKAGTNSVANAAGNSTDAAIGSGLQSV-LTAATAQGSAALSGGNNGTAV 274

Query: 102 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 161
               NT + T+   +      +N        + +  +  T+    T   T      +  +
Sbjct: 275 IGKNNTLSGTSGANSIAAAAGSN-GDTAIVASGSLASATTDVALQTAAGTTVTNGVSLGS 333

Query: 162 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 221
            T T  +    TN   N                 + + + +   + +   N         
Sbjct: 334 ATETAADVKDVTNDGLNAGAIVKVGLANGNTVVGDLSNSKDNLNSISAGGNNKVFHANTA 393

Query: 222 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 281
             N +T T++      +  +     +  +    + + T    N    +      N     
Sbjct: 394 ADNGSTGTDSIALGKNSVVSGEGKLSVGSGAGASGSGTVAIGNGAAASADADAVNLGQLK 453

Query: 282 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTN 340
            T+T   T +   T    N  +   + T T  +    NT   +N       N  +    N
Sbjct: 454 VTDTVAGTGSVQGTGATYNGASGNTSGTVTVGDAVKGNTRKISNVADGDAVNAGSTDAVN 513

Query: 341 TS 342
            S
Sbjct: 514 GS 515

Length = 715

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 46.3 bits (109), Expect = 6e-05
 Identities = 52/306 (16%), Positives = 95/306 (31%)

Query: 67  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 126
           T  ++ TNT  N            T ++        T+         +     +  T   
Sbjct: 333 TMADSETNTAPNVTVTAFWAWGNVTQSDFKCKWVLATHGQNPEGCERSLGFFNSNRTFEV 392

Query: 127 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 186
           T  N   +  T   T T TN  T T+          T +     T  +   +  T   T 
Sbjct: 393 TVANPVADAKTLIITRTATNATTTTHKVVFHKAPDTTKSVIFVYTLVHVEPHKTTAVPTT 452

Query: 187 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 246
            +    +   T +  +  + T T T ++T     + T+  T+   N  + T   T  N  
Sbjct: 453 PSLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSPTSRTTSATPNATSPTPAVTTPNAT 512

Query: 247 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 306
           + T   T+   N  + T       T   +     T+    T+      +  N        
Sbjct: 513 SPTTQKTSDTPNATSPTPIVIGVTTTATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVT 572

Query: 307 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQHQHQHQQQQLIH 366
           +  +  T+  T     T ++  +      +++ +T  S STST+      H    + +  
Sbjct: 573 SAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITE 632

Query: 367 FLSSSP 372
              S P
Sbjct: 633 ETPSVP 638

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|234450 TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family

 Score = 46.8 bits (112), Expect = 6e-05
 Identities = 30/232 (12%), Positives = 62/232 (26%), Gaps = 5/232 (2%)

Query: 31  KARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 90
           KAR + SL   N       +     N   N +         + N + + +   N   +T+
Sbjct: 301 KARYYVSLGYYNEEGILKNSDYKRYNFRANIDAKLTKTLKLSLNVSGSLSKYNNPGGSTS 360

Query: 91  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN----TNTNTNTNTNTNTNTNTN 146
              N        T  +T    +        +   +  N     N   N N     N N +
Sbjct: 361 NIWNALMLFPRGTPYSTPPYYSDGYYPAYGSGNTSLQNPYALLNRGYNENERNRLNANAS 420

Query: 147 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 206
                          + + +   N            T    N   + + + + N      
Sbjct: 421 LEQKITKGLKLKGTFSYDYSNYKNEKYYPKPYYYNATGGANNGYYSESNSRSRNYYLEAT 480

Query: 207 TNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 257
            N N      N +         N +++     +   N +  T   + + +++
Sbjct: 481 LNYNRTFGKHNVSALLGYEQQENKSSSYGGLLDDLPNLDAGTAAASVSGSDS 532

This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores [Transport and binding proteins, Unknown substrate]. Length = 982

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 46.5 bits (110), Expect = 7e-05
 Identities = 44/333 (13%), Positives = 123/333 (36%), Gaps = 1/333 (0%)

Query: 84  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTN 142
           N  + T    N N  T    N     N +++++++ +++    +  ++ T+  +  +N+ 
Sbjct: 95  NERSKTPIKNNDNVTTPIKANKKEKHNLDSSSSSSISSSLTNISFFSSPTSIYSCLSNSL 154

Query: 143 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 202
           ++ ++      N +T+ N +++ +      +N      TN    T  +    +  NT+T 
Sbjct: 155 SSKHSPKVIKENQSTHVNISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTI 214

Query: 203 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 262
            N   + N   N   + N   + + +  T  N+  +   N++ +     +       +  
Sbjct: 215 KNNTNDKNKEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKDEK 274

Query: 263 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 322
              +   ++      +     ++   +N      T    N     N ++N+N +  +++N
Sbjct: 275 NVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDTSSSN 334

Query: 323 TNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDR 382
              +   +    ++     +T+  T+ + NN++      Q+  H L     ++   S+  
Sbjct: 335 HLGSNRISNRNPSSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHATINKRSSMLP 394

Query: 383 LNSMSPAARKLATNAEPVVKMQVTDQSAKITSL 415
           ++          +       M+   +  K T++
Sbjct: 395 MSEQKGRGASEKSEYIKEFTMEEVAKLTKDTTI 427

Length = 1164

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 49/224 (21%), Positives = 72/224 (32%), Gaps = 35/224 (15%)

Query: 416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA 475
            +      + +G + G I  WDLR    L          +  + FS D  +  + S    
Sbjct: 248 SFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGT 307

Query: 476 VE--------------------PINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTY 514
           V                     P++ + FS D ++ ++  S D T +L+     + LKT 
Sbjct: 308 VRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTL 367

Query: 515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG 574
                V S + SP    V  G                    R + L        + GH  
Sbjct: 368 EGHSNVLSVSFSPDGRVVSSGSTDGT--------------VRLWDLSTGSLLRNLDGHTS 413

Query: 575 PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSST 618
            + SL F PDGKS ASG  D  +    L   L     S      
Sbjct: 414 RVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVL 457

Length = 466

>gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional

 Score = 45.4 bits (107), Expect = 1e-04
 Identities = 35/247 (14%), Positives = 83/247 (33%)

Query: 5   ILSSPLSVDRLNSMSPAARKLATVVVKARAFFSLRDTNTNTNTNTNTNTNTNTNTNTNTN 64
             SSP S+    S S +++    V+ + ++      ++ +      +N      TN    
Sbjct: 139 FFSSPTSIYSCLSNSLSSKHSPKVIKENQSTHVNISSDNSPRNKEISNKQLKKQTNVTHT 198

Query: 65  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 124
           T  +    +  NT+T  N   + N   N   + N   + + +  T  N+  +   N++ +
Sbjct: 199 TCYDKMRRSPRNTSTIKNNTNDKNKEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFD 258

Query: 125 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 184
                +       +     +   ++      +     ++   +N      T    N    
Sbjct: 259 VRILRSYTKENKKDEKNVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHR 318

Query: 185 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 244
            N ++N+N +  +++N   +   +    ++      T  +TN   N   N    T    +
Sbjct: 319 NNGSSNSNNDDTSSSNHLGSNRISNRNPSSPYKKQTTTKHTNNTKNNKYNKTKTTQKFNH 378

Query: 245 TNTNTNT 251
              +  T
Sbjct: 379 PLRHHAT 385

Length = 1164

>gnl|CDD|225999 COG3468, AidA, Type V secretory pathway, adhesin AidA [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]

 Score = 45.6 bits (108), Expect = 1e-04
 Identities = 40/306 (13%), Positives = 74/306 (24%), Gaps = 2/306 (0%)

Query: 55  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 114
            + N N  T T   T          N +      T T  ++ T+   + + NTN NT+  
Sbjct: 101 LDANGNNLTFTAIRTLDEGGNYVGHNGSQADTV-TLTGDDSITDPLNSISGNTNGNTDVQ 159

Query: 115 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNT 173
            N    T   T       T     +  NT      T  N +          T   T    
Sbjct: 160 VNNGGGTGDTTVNGGGLQTVGGGASAGNTTLAGGFTQVNGDGTVEAGAYDYTGRQTVHAG 219

Query: 174 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 233
               N   N+    + +  T T           T            N     N   N   
Sbjct: 220 GLAGNWYLNSGGTLDGDWATRTFQAPGGAIVPGTAATVRPEAELGGNFTAENNALNNLGL 279

Query: 234 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 293
                    ++            +  +  TN     N+  + N +       +   +  +
Sbjct: 280 ENGGTLCVRSDATKTLVDAGGLLSVNDGGTNGLWLRNSGGHLNVSGGAALGGSGTNSNGS 339

Query: 294 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNN 353
                 +   N + +   +              T+   +      T   +  + +T   +
Sbjct: 340 VFQLGGDQAQNLSLDGGLHLGVMAGYAKADTDVTSGLADGLGADKTTGYSLGAYATWYAS 399

Query: 354 QHQHQH 359
             +   
Sbjct: 400 SAKATG 405

Length = 592

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 44.2 bits (105), Expect = 2e-04
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 828 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL 871
           R + L   E    + GH   + SLA+ PDGK  ASG  DG +R+
Sbjct: 244 RVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRI 287

Length = 289

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 45.2 bits (107), Expect = 2e-04
 Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 4/280 (1%)

Query: 76  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 135
           ++  N NT  +T   T+    T +   +  N +      +  N          T      
Sbjct: 1   SSLANDNTTGSTGIGTDAAAGTLSTVASGANVDAKGVGASALNAKALGGGKEVTALGGAL 60

Query: 136 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 195
           N+   +    +   +   + +TN + N+   T       + +     TN           
Sbjct: 61  NSGAVSLGTLSVVGDGGKDGSTNGD-NSLGLTQDTGAAVSASKGEVITNVAAGLKNVDTM 119

Query: 196 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTN 254
           N   +   N+ T   + ++T     T     T  T   +  + +      T++       
Sbjct: 120 NVIVSIILNSGTGAASASSTLAAGTTIRAVATGKTAVLSTASASGVQAKATDSALGFENT 179

Query: 255 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 313
                                   TN   ++ T+  N +T    +      TN+  N   
Sbjct: 180 AVDQQAGAAGLGNAAENADTNEARTNDLGDSLTDDGNQSTIAVGSVGLKAGTNSVANAAG 239

Query: 314 NTNTNTNTNTNTNTNT-NTNTNTNTNTNTSTSTSTSTSTN 352
           N+      +   +  T  T   +   +  +  T+     N
Sbjct: 240 NSTDAAIGSGLQSVLTAATAQGSAALSGGNNGTAVIGKNN 279

Length = 715

>gnl|CDD|227614 COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]

 Score = 45.2 bits (107), Expect = 2e-04
 Identities = 35/281 (12%), Positives = 76/281 (27%), Gaps = 3/281 (1%)

Query: 78  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 137
           ++  N NT  +T   T+    T +   +  N +      +  N          T      
Sbjct: 1   SSLANDNTTGSTGIGTDAAAGTLSTVASGANVDAKGVGASALNAKALGGGKEVTALGGAL 60

Query: 138 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 197
           N+   +    +   +   + +TN + N+   T       + +     TN           
Sbjct: 61  NSGAVSLGTLSVVGDGGKDGSTNGD-NSLGLTQDTGAAVSASKGEVITNVAAGLKNVDTM 119

Query: 198 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTN 256
           N   +   N+ T   + ++T     T     T  T   +  + +      T++       
Sbjct: 120 NVIVSIILNSGTGAASASSTLAAGTTIRAVATGKTAVLSTASASGVQAKATDSALGFENT 179

Query: 257 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNT 315
                                   TN   ++ T+  N +T    +      TN+  N   
Sbjct: 180 AVDQQAGAAGLGNAAENADTNEARTNDLGDSLTDDGNQSTIAVGSVGLKAGTNSVANAAG 239

Query: 316 NTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQHQ 356
           N+      +   +  T      +   S   + +      + 
Sbjct: 240 NSTDAAIGSGLQSVLTAATAQGSAALSGGNNGTAVIGKNNT 280

Length = 715

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 569 IKGHFGPINSLAFHPDGKSYASGGEDG 595
           +KGH GP+ S+AF PDG   ASG +DG
Sbjct: 7   LKGHTGPVTSVAFSPDGNLLASGSDDG 33

Length = 39

>gnl|CDD|225999 COG3468, AidA, Type V secretory pathway, adhesin AidA [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]

 Score = 45.2 bits (107), Expect = 2e-04
 Identities = 42/314 (13%), Positives = 68/314 (21%), Gaps = 2/314 (0%)

Query: 40  DTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 99
               N              T                +     +       N +   N N 
Sbjct: 32  TLVDNGKGENQGGLEVGDGTVILNQQADENGKKQAFSQVGIVSGRGTVVLNGDQQINPNN 91

Query: 100 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 159
                     + N N  T T   T          N +      T T  ++ T+   + + 
Sbjct: 92  LYFGFRGGRLDANGNNLTFTAIRTLDEGGNYVGHNGSQADTV-TLTGDDSITDPLNSISG 150

Query: 160 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTNTNTNTNTNTNTN 218
           NTN NT+   N    T   T       T     +  NT      T  N +          
Sbjct: 151 NTNGNTDVQVNNGGGTGDTTVNGGGLQTVGGGASAGNTTLAGGFTQVNGDGTVEAGAYDY 210

Query: 219 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 278
           T   T        N   N+    + +  T T           T            N    
Sbjct: 211 TGRQTVHAGGLAGNWYLNSGGTLDGDWATRTFQAPGGAIVPGTAATVRPEAELGGNFTAE 270

Query: 279 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 338
            N   N            ++            +  +  TN     N+  + N +      
Sbjct: 271 NNALNNLGLENGGTLCVRSDATKTLVDAGGLLSVNDGGTNGLWLRNSGGHLNVSGGAALG 330

Query: 339 TNTSTSTSTSTSTN 352
            + + S  +     
Sbjct: 331 GSGTNSNGSVFQLG 344

Length = 592

>gnl|CDD|225999 COG3468, AidA, Type V secretory pathway, adhesin AidA [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]

 Score = 44.8 bits (106), Expect = 2e-04
 Identities = 50/307 (16%), Positives = 73/307 (23%), Gaps = 6/307 (1%)

Query: 53  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 112
            N   N          T  N +  +     T  +     N       +  T         
Sbjct: 2   NNNGKNITVAGAGTLVTGPNNDRLSKIGKGTLVDNGKGENQGGLEVGDG-TVILNQQADE 60

Query: 113 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 172
                  +     +       N +   N N           + N N  T T   T     
Sbjct: 61  NGKKQAFSQVGIVSGRGTVVLNGDQQINPNNLYFGFRGGRLDANGNNLTFTAIRTLDEGG 120

Query: 173 TNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 231
                N +  +T T T  ++ T+   + + NTN NT+   N    T   T       T  
Sbjct: 121 NYVGHNGSQADTVTLTGDDSITDPLNSISGNTNGNTDVQVNNGGGTGDTTVNGGGLQTVG 180

Query: 232 NTNTNTNTNTN---TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 288
              +  NT      T  N +          T   T        N   N+    + +  T 
Sbjct: 181 GGASAGNTTLAGGFTQVNGDGTVEAGAYDYTGRQTVHAGGLAGNWYLNSGGTLDGDWATR 240

Query: 289 TNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTST 347
           T           T  T           T  N   N     N  T    +  T T      
Sbjct: 241 TFQAPGGAIVPGTAATVRPEAELGGNFTAENNALNNLGLENGGTLCVRSDATKTLVDAGG 300

Query: 348 STSTNNQ 354
             S N+ 
Sbjct: 301 LLSVNDG 307

Length = 592

>gnl|CDD|234450 TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family

 Score = 45.3 bits (108), Expect = 2e-04
 Identities = 31/294 (10%), Positives = 65/294 (22%), Gaps = 41/294 (13%)

Query: 102 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 161
             N   +                 + +   NT+        T  N   N + +  T    
Sbjct: 244 RLNRGLSPPDLYTDEEIEAYRNGLDPDLYPNTDWQDEIFKRTAFNQRHNLSVSGGTEKAR 303

Query: 162 ------NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 215
                   N       +     N   N +         + N + + +   N   +T+   
Sbjct: 304 YYVSLGYYNEEGILKNSDYKRYNFRANIDAKLTKTLKLSLNVSGSLSKYNNPGGSTSNIW 363

Query: 216 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN----TNTNTNTNTNTNTNTNTNTNT 271
           N        T  +T    +        +   +  N     N   N N     N N +   
Sbjct: 364 NALMLFPRGTPYSTPPYYSDGYYPAYGSGNTSLQNPYALLNRGYNENERNRLNANASLEQ 423

Query: 272 N-------------TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT--- 315
                           +N             N     N    + +N+ +       T   
Sbjct: 424 KITKGLKLKGTFSYDYSNYKNEKYYPKPYYYNATGGANNGYYSESNSRSRNYYLEATLNY 483

Query: 316 ---------------NTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQ 354
                              N +++     +   N +  T  ++ + + +    Q
Sbjct: 484 NRTFGKHNVSALLGYEQQENKSSSYGGLLDDLPNLDAGTAAASVSGSDSEYRLQ 537

This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores [Transport and binding proteins, Unknown substrate]. Length = 982

>gnl|CDD|217301 pfam02956, TT_ORF1, TT viral orf 1

 Score = 44.6 bits (106), Expect = 2e-04
 Identities = 19/77 (24%), Positives = 25/77 (32%)

Query: 35  FFSLRDTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 94
           F  L     N     +T T +   T   T   T T  NT            N N  TN  
Sbjct: 258 FQVLNPGFYNNALWISTTTTSKGKTLLITLYKTVTYYNTFETPAQLKPKTKNKNKTTNKT 317

Query: 95  TNTNTNTNTNTNTNTNT 111
            N +T+   ++    NT
Sbjct: 318 PNDSTSKYWDSPYGDNT 334

TT virus (TTV), isolated initially from a Japanese patient with hepatitis of unknown aetiology, has since been found to infect both healthy and diseased individuals and numerous prevalence studies have raised questions about its role in unexplained hepatitis. ORF1 is a large 750 residue protein. The N-terminal half of this protein corresponds to the capsid protein. Length = 525

>gnl|CDD|219210 pfam06873, SerH, Cell surface immobilisation antigen SerH

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 39/284 (13%), Positives = 108/284 (38%), Gaps = 2/284 (0%)

Query: 73  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 132
           +N      T+++      T     +      ++ T+  T++N N    T +  N+N   N
Sbjct: 110 SNRRRGAWTDSDCTLCNPTTPAAVSGACQACSSITSGWTDSNCNACATTASPKNSNVFAN 169

Query: 133 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 192
           +  +    ++ +  + +   T          N  T       ++   ++    +++T+  
Sbjct: 170 SAGSACVASSASCGSTSRGTTAWTDADCLLCNPTTPYLVGDKSSCAASSCAACSSSTSGW 229

Query: 193 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 252
           T+++ N    T + +  N   N   ++   ++ +  +++   T       T    +T   
Sbjct: 230 TDSDCNACNTTASPSTKNIFANAAGSSCVASSASCGSSSRGTTAWTDGDCTLCTPSTPAV 289

Query: 253 TNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTNTNTNTN 310
             ++  ++    ++ T+  T+ N N+   T +    N   N + +     + +   +   
Sbjct: 290 YASSDGSSCVACSSITSGWTDANCNSCAMTASPNTKNVFANADGSACVASSYSCNQSRRG 349

Query: 311 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNNQ 354
           +N  T+ +      T +N N   + + ++  +TS S+S++ +  
Sbjct: 350 SNKWTDADCALCNGTASNANQYASADGSSCQATSASSSSTFSGS 393

This family consists of several cell surface immobilisation antigen SerH proteins which seem to be specific to Tetrahymena thermophila. The SerH locus of Tetrahymena thermophila is one of several paralogous loci with genes encoding variants of the major cell surface protein known as the immobilisation antigen (i-ag). Length = 407

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 43.5 bits (103), Expect = 3e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 839 ARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEF 889
           A + GH G +NS+AF PDG+   S   DG ++L          T    E  
Sbjct: 171 ATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG 221

Length = 289

>gnl|CDD|237555 PRK13914, PRK13914, invasion associated secreted endopeptidase; Provisional

 Score = 44.0 bits (103), Expect = 3e-04
 Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 268 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 327
           NTNTNT T     T T   T     T         + TNTN N           NTNT+T
Sbjct: 274 NTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPS-TNTNANKTNTNTNTNTNNTNTST 332

Query: 328 ---NTNTNTNTNTNTNTSTSTSTSTSTNN 353
              NTNTNTN+NTNTN++T+ +  +S NN
Sbjct: 333 PSKNTNTNTNSNTNTNSNTNANQGSSNNN 361

Length = 481

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
           E    +KGH GP+ S+AF PDGK  ASG +DG +
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTI 36

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 42.7 bits (101), Expect = 5e-04
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query: 841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRL 871
           +KGH G +  +AF PDGK  A+G  DG +++
Sbjct: 5   LKGHTGGVTCVAFSPDGKLLATGSGDGTIKV 35

Length = 289

>gnl|CDD|225999 COG3468, AidA, Type V secretory pathway, adhesin AidA [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]

 Score = 43.3 bits (102), Expect = 5e-04
 Identities = 47/325 (14%), Positives = 80/325 (24%), Gaps = 3/325 (0%)

Query: 41  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNT 99
           T  N +  +     T  +     N       +     N   + N      +     +   
Sbjct: 18  TGPNNDRLSKIGKGTLVDNGKGENQGGLEVGDGTVILNQQADENGKKQAFSQVGIVSGRG 77

Query: 100 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTNTNTN 158
               N +   N N           + N N  T T   T          N +  +T T T 
Sbjct: 78  TVVLNGDQQINPNNLYFGFRGGRLDANGNNLTFTAIRTLDEGGNYVGHNGSQADTVTLTG 137

Query: 159 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNT 217
            ++ T+   + + NTN NT+   N    T   T       T     +  NT      T  
Sbjct: 138 DDSITDPLNSISGNTNGNTDVQVNNGGGTGDTTVNGGGLQTVGGGASAGNTTLAGGFTQV 197

Query: 218 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 277
           N +          T   T        N   N+    + +  T T           T    
Sbjct: 198 NGDGTVEAGAYDYTGRQTVHAGGLAGNWYLNSGGTLDGDWATRTFQAPGGAIVPGTAATV 257

Query: 278 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 337
                   N     N   N            ++            +  +  TN     N+
Sbjct: 258 RPEAELGGNFTAENNALNNLGLENGGTLCVRSDATKTLVDAGGLLSVNDGGTNGLWLRNS 317

Query: 338 NTNTSTSTSTSTSTNNQHQHQHQQQ 362
             + + S   +   +  + +    Q
Sbjct: 318 GGHLNVSGGAALGGSGTNSNGSVFQ 342

Length = 592

>gnl|CDD|235943 PRK07133, PRK07133, DNA polymerase III subunits gamma and tau; Validated

 Score = 43.7 bits (103), Expect = 5e-04
 Identities = 33/187 (17%), Positives = 55/187 (29%), Gaps = 2/187 (1%)

Query: 44  NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 103
           N +       N N     +   N      T  N N N++   N   N  TN+        
Sbjct: 378 NLDIKEKKIENENDIEGKSDTKNLEEGFETKDNKNKNSSFI-NKTENILTNSPLKDELLE 436

Query: 104 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 163
            T    N   N           +  +      + N N       +   N + + N     
Sbjct: 437 KTTEIIN-IENPQEFEFGQIGNDIISTEIAQLDENQNLIDTGEFDLENNFSNSFNPENGN 495

Query: 164 NTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT 223
             + N N   +T+T +   +   TN   + N       N+    +   +T T  N+  N 
Sbjct: 496 KIDENINETFDTSTISANLSENKTNFAQSFNNKDTNLINSEIPIDLIKDTITINNSQKNV 555

Query: 224 NTNTNTN 230
             N N +
Sbjct: 556 KKNGNKD 562

Length = 725

>gnl|CDD|180536 PRK06347, PRK06347, autolysin; Reviewed

 Score = 43.1 bits (101), Expect = 6e-04
 Identities = 50/309 (16%), Positives = 101/309 (32%), Gaps = 1/309 (0%)

Query: 45  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 104
           +NT +  +          T+T   T  N   +    T  ++   T  N+ +  N++ ++N
Sbjct: 264 SNTTSYKDATKALTGTYATDTAYATKLNDLISRYNLTQYDSGKTTGGNSGSTGNSSNSSN 323

Query: 105 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 164
           T   +N    T    ++      N           N   +           +  + T+  
Sbjct: 324 TGNTSNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKVSAGSTTSDT 383

Query: 165 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 224
             +  +T T+T+  + T T+TN    T    ++      N         + N   +    
Sbjct: 384 NTSKPSTGTSTSKPS-TGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKSWNNLKSDFIY 442

Query: 225 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 284
                  +  + +NTNT+  +     +  +TNTNTN    T    ++      N      
Sbjct: 443 PGQKLKVSAGSTSNTNTSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIA 502

Query: 285 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTS 344
              + N   +           +  + TN       +TN  +N+   T T    ++  + S
Sbjct: 503 NLKSWNNLKSDFIYPGQKLKVSAGSTTNNTNTAKPSTNKPSNSTVKTYTVKKGDSLWAIS 562

Query: 345 TSTSTSTNN 353
               T+ +N
Sbjct: 563 RQYKTTVDN 571

Length = 592

>gnl|CDD|219210 pfam06873, SerH, Cell surface immobilisation antigen SerH

 Score = 42.6 bits (100), Expect = 7e-04
 Identities = 40/287 (13%), Positives = 108/287 (37%), Gaps = 2/287 (0%)

Query: 69  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 128
           +N      T+++      T     +      ++ T+  T++N N    T +  N+N   N
Sbjct: 110 SNRRRGAWTDSDCTLCNPTTPAAVSGACQACSSITSGWTDSNCNACATTASPKNSNVFAN 169

Query: 129 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 188
           +  +    ++ +  + +   T          N  T       ++   ++    +++T+  
Sbjct: 170 SAGSACVASSASCGSTSRGTTAWTDADCLLCNPTTPYLVGDKSSCAASSCAACSSSTSGW 229

Query: 189 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 248
           T+++ N    T + +  N   N   ++   ++ +  +++   T       T    +T   
Sbjct: 230 TDSDCNACNTTASPSTKNIFANAAGSSCVASSASCGSSSRGTTAWTDGDCTLCTPSTPAV 289

Query: 249 TNTNTNTN-TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN-TNTNTNTNTN 306
             ++  ++    ++ T+  T+ N N+   T +    N   N + +     + +   +   
Sbjct: 290 YASSDGSSCVACSSITSGWTDANCNSCAMTASPNTKNVFANADGSACVASSYSCNQSRRG 349

Query: 307 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNN 353
           +N  T+ +      T +N N   + + ++   T+ S+S++ S S   
Sbjct: 350 SNKWTDADCALCNGTASNANQYASADGSSCQATSASSSSTFSGSIFV 396

This family consists of several cell surface immobilisation antigen SerH proteins which seem to be specific to Tetrahymena thermophila. The SerH locus of Tetrahymena thermophila is one of several paralogous loci with genes encoding variants of the major cell surface protein known as the immobilisation antigen (i-ag). Length = 407

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.6 bits (98), Expect = 0.001
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 828 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTF 883
           R + L   E    + GH   ++S+AF PDG+  +S   D  +++   +      T 
Sbjct: 76  RLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTL 131

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.2 bits (97), Expect = 0.002
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 827 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL 871
            + + +   +    ++GH   +NS+AF PDG   AS  +DG ++L
Sbjct: 117 IKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL 161

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.2 bits (97), Expect = 0.002
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLI 598
           +KGH G +  +AF PDGK  A+G  DG + 
Sbjct: 5   LKGHTGGVTCVAFSPDGKLLATGSGDGTIK 34

Length = 289

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 41.2 bits (97), Expect = 0.002
 Identities = 27/184 (14%), Positives = 51/184 (27%)

Query: 169 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 228
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 229 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 288
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 289 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTS 348
           T T      +      +     T                  + +   +T  +T  S + +
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 349 TSTN 352
           ++ +
Sbjct: 298 STQD 301

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.003
 Identities = 26/188 (13%), Positives = 48/188 (25%)

Query: 155 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 214
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 215 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 274
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 275 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 334
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 335 TNTNTNTS 342
           +  +    
Sbjct: 298 STQDGYAP 305

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 41  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 100
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 101 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 160
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 161 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 220
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 221 TNTNTNT 227
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 45  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 104
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 105 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 164
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 165 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 224
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 225 TNTNTNT 231
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 61  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 120
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 121 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 180
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 181 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 240
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 241 TNTNTNT 247
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 71  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 130
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 131 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 190
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 191 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 250
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 251 TNTNTNT 257
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 73  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 132
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 133 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 192
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 193 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 252
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 253 TNTNTNT 259
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 75  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 134
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 135 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 194
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 195 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 254
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 255 TNTNTNT 261
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 77  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 136
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 137 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 196
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 197 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 256
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 257 TNTNTNT 263
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 79  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 138
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 139 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 198
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 199 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 258
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 259 TNTNTNT 265
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 81  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 140
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 141 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 200
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 201 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 260
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 261 TNTNTNT 267
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 83  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 142
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 143 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 202
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 203 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 262
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 263 TNTNTNT 269
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 85  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 144
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 145 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 204
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 205 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 264
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 265 TNTNTNT 271
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 87  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 146
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 147 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 206
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 207 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 266
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 267 TNTNTNT 273
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 89  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 148
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 149 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 208
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 209 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 268
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 269 TNTNTNT 275
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 91  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 150
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 151 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 210
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 211 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 270
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 271 TNTNTNT 277
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 101 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 160
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 161 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 220
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 221 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 280
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 281 TNTNTNT 287
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 109 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 168
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 169 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 228
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 229 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 288
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 289 TNTNTNT 295
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 113 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 172
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 173 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 232
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 233 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 292
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 293 TNTNTNT 299
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 115 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 174
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 175 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 234
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 235 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 294
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 295 TNTNTNT 301
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 117 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 176
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 177 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 236
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 237 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 296
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 297 TNTNTNT 303
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 119 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 178
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 179 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 238
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 239 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 298
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 299 TNTNTNT 305
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 121 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 180
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 181 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 240
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 241 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 300
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 301 TNTNTNT 307
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 123 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 182
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 183 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 242
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 243 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 302
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 303 TNTNTNT 309
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 125 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 184
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 185 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 244
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 245 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 304
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 305 TNTNTNT 311
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 127 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 186
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 187 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 246
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 247 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 306
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 307 TNTNTNT 313
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 129 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 188
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 189 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 248
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 249 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 308
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 309 TNTNTNT 315
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 131 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 190
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 191 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 250
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 251 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 310
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 311 TNTNTNT 317
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 133 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 192
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 193 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 252
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 253 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 312
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 313 TNTNTNT 319
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 135 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 194
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 195 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 254
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 255 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 314
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 315 TNTNTNT 321
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 137 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 196
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 197 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 256
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 257 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 316
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 317 TNTNTNT 323
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 139 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 198
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 199 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 258
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 259 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 318
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 319 TNTNTNT 325
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 141 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 200
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 201 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 260
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 261 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 320
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 321 TNTNTNT 327
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 143 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 202
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 203 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 262
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 263 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 322
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 323 TNTNTNT 329
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 145 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 204
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 205 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 264
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 265 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 324
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 325 TNTNTNT 331
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 147 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 206
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 207 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 266
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 267 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 326
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 327 TNTNTNT 333
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 149 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 208
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 209 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 268
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 269 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 328
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 329 TNTNTNT 335
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 151 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 210
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 211 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 270
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 271 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 330
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 331 TNTNTNT 337
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|224663 COG1749, FlgE, Flagellar hook protein FlgE [Cell motility and secretion]

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 26/187 (13%), Positives = 48/187 (25%)

Query: 153 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 212
            N           N  T       T  N     N        TN + + N N+     + 
Sbjct: 118 VNPAGLYLQGYPANGVTGGINGGTTLLNIQIPNNNGLPAKATTNVSFSANLNSGAIVPSI 177

Query: 213 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 272
           T     T+T T     + T  ++  N +T       T TNT        +   + +   +
Sbjct: 178 TAPFNPTDTATYNYKTSLTVYDSLGNKHTLDVYFVKTGTNTWQVYVLVKSQTGDPDGTAD 237

Query: 273 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 332
           T T      +      +     T                  + +   +T  +T  +    
Sbjct: 238 TGTTFTLEFDPAGALTSGEPGPTEIVGPNVAVNGATLAQGISLDLTGSTQQSTGFSLTVA 297

Query: 333 TNTNTNT 339
           +  +   
Sbjct: 298 STQDGYA 304

Length = 423

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 40.6 bits (95), Expect = 0.004
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 269 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNT-NTNTNTNTNTNTNTNTNTNTNTNTNTNT 327
           T T+  T+         +      T + +   NT+    T +   T T T T T T++ +
Sbjct: 762 TGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSSPS 821

Query: 328 NTNTNTNTNTNTNTSTSTSTSTST 351
            T T + T T+T+T+T+TS S +T
Sbjct: 822 PTQTTSPTQTSTSTTTTTSPSQTT 845

Length = 872

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	894
KOG0271|consensus	480		100.0
KOG0318|consensus	603		100.0
KOG0291|consensus	893		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0318|consensus	603		100.0
KOG0319|consensus	775		100.0
KOG0286|consensus	343		100.0
KOG0306|consensus	888		100.0
KOG0279|consensus	315		100.0
KOG0291|consensus	893		100.0
KOG0319|consensus	775		100.0
KOG0643|consensus	327		100.0
KOG0296|consensus	399		100.0
KOG0272|consensus	459		100.0
KOG0315|consensus	311		100.0
KOG0282|consensus	503		100.0
KOG0645|consensus	312		100.0
KOG0295|consensus	406		100.0
KOG0293|consensus	519		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0265|consensus	338		100.0
KOG0263|consensus	707		100.0
KOG0285|consensus	460		100.0
KOG0266|consensus	456		100.0
KOG1408|consensus	1080		100.0
KOG0273|consensus	524		100.0
KOG0279|consensus	315		99.98
KOG0306|consensus	888		99.98
KOG0284|consensus	464		99.98
KOG0278|consensus	334		99.97
KOG0286|consensus	343		99.97
KOG0273|consensus	524		99.97
KOG0276|consensus	794		99.97
KOG1539|consensus	910		99.97
KOG0292|consensus	1202		99.97
KOG0263|consensus	707		99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG0316|consensus	307		99.96
KOG0295|consensus	406		99.96
KOG0315|consensus	311		99.96
KOG1063|consensus	764		99.96
KOG0281|consensus	499		99.96
KOG0640|consensus	430		99.96
KOG0275|consensus	508		99.96
KOG0284|consensus	464		99.96
KOG0285|consensus	460		99.96
KOG0316|consensus	307		99.96
KOG0265|consensus	338		99.96
KOG2048|consensus	691		99.96
KOG0645|consensus	312		99.96
KOG0276|consensus	794		99.96
KOG0266|consensus	456		99.95
KOG2096|consensus	420		99.95
KOG1407|consensus	313		99.95
KOG0305|consensus	484		99.95
KOG0296|consensus	399		99.95
KOG0293|consensus	519		99.95
KOG2106|consensus	626		99.95
KOG0313|consensus	423		99.95
KOG0281|consensus	499		99.95
KOG0292|consensus	1202		99.94
KOG0274|consensus	537		99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.94
KOG0283|consensus	712		99.94
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.94
KOG0973|consensus	942		99.94
KOG1446|consensus	311		99.94
KOG0268|consensus	433		99.94
KOG0289|consensus	506		99.94
KOG0772|consensus	641		99.94
KOG0300|consensus	481		99.93
KOG1063|consensus	764		99.93
PTZ00421	493	coronin; Provisional	99.93
KOG0278|consensus	334		99.93
KOG0288|consensus	459		99.93
KOG0282|consensus	503		99.93
KOG4283|consensus	397		99.93
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.93
KOG0274|consensus	537		99.93
KOG0639|consensus	705		99.92
KOG1539|consensus	910		99.92
KOG0294|consensus	362		99.92
PTZ00421	493	coronin; Provisional	99.92
KOG2106|consensus	626		99.92
PTZ00420	568	coronin; Provisional	99.92
KOG0277|consensus	311		99.92
KOG1407|consensus	313		99.92
KOG0275|consensus	508		99.92
KOG1446|consensus	311		99.92
KOG0641|consensus	350		99.92
KOG0299|consensus	479		99.92
KOG0313|consensus	423		99.91
KOG0310|consensus	487		99.91
KOG0310|consensus	487		99.91
KOG0305|consensus	484		99.91
KOG0650|consensus	733		99.91
KOG0643|consensus	327		99.91
KOG1408|consensus	1080		99.91
KOG0646|consensus	476		99.91
KOG1273|consensus	405		99.91
KOG0301|consensus	745		99.9
KOG0308|consensus	735		99.9
PTZ00420	568	coronin; Provisional	99.9
KOG2055|consensus	514		99.9
KOG0973|consensus	942		99.9
KOG0647|consensus	347		99.9
KOG0640|consensus	430		99.89
KOG0277|consensus	311		99.89
KOG0289|consensus	506		99.89
KOG2048|consensus	691		99.89
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG1332|consensus	299		99.89
KOG1445|consensus	1012		99.89
KOG1036|consensus	323		99.88
KOG0283|consensus	712		99.88
KOG0299|consensus	479		99.88
KOG0641|consensus	350		99.88
KOG2445|consensus	361		99.87
KOG0288|consensus	459		99.87
KOG0264|consensus	422		99.87
KOG0308|consensus	735		99.87
KOG1009|consensus	434		99.87
KOG0772|consensus	641		99.87
KOG0321|consensus	720		99.86
KOG1274|consensus	933		99.86
KOG0647|consensus	347		99.86
KOG1274|consensus	933		99.85
KOG0294|consensus	362		99.85
KOG0267|consensus	825		99.85
KOG1963|consensus	792		99.84
KOG0646|consensus	476		99.84
KOG0301|consensus	745		99.84
KOG0267|consensus	825		99.84
KOG1036|consensus	323		99.83
KOG4328|consensus	498		99.83
KOG0639|consensus	705		99.83
KOG0300|consensus	481		99.82
KOG1538|consensus	1081		99.82
KOG0269|consensus	839		99.82
KOG2096|consensus	420		99.81
KOG2055|consensus	514		99.8
KOG0269|consensus	839		99.8
KOG4497|consensus	447		99.8
KOG0321|consensus	720		99.8
KOG1538|consensus	1081		99.8
KOG1188|consensus	376		99.8
KOG0264|consensus	422		99.79
KOG0268|consensus	433		99.79
KOG1332|consensus	299		99.79
COG2319	466	FOG: WD40 repeat [General function prediction only	99.79
KOG2919|consensus	406		99.79
KOG0322|consensus	323		99.78
KOG1034|consensus	385		99.78
KOG1445|consensus	1012		99.78
KOG0302|consensus	440		99.77
KOG4227|consensus	609		99.77
KOG4378|consensus	673		99.76
KOG4283|consensus	397		99.76
PRK11028	330	6-phosphogluconolactonase; Provisional	99.76
KOG2445|consensus	361		99.76
KOG0650|consensus	733		99.76
KOG1524|consensus	737		99.73
KOG1034|consensus	385		99.73
KOG1273|consensus	405		99.72
KOG0642|consensus	577		99.71
KOG2919|consensus	406		99.71
KOG0302|consensus	440		99.71
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.7
KOG1007|consensus	370		99.7
KOG0303|consensus	472		99.7
KOG0307|consensus	1049		99.7
KOG4497|consensus	447		99.7
KOG0307|consensus	1049		99.69
PRK01742	429	tolB translocation protein TolB; Provisional	99.69
KOG0270|consensus	463		99.68
KOG0270|consensus	463		99.68
KOG0649|consensus	325		99.68
KOG2110|consensus	391		99.67
KOG1524|consensus	737		99.67
KOG1517|consensus	1387		99.67
KOG1334|consensus	559		99.66
KOG0644|consensus	1113		99.66
KOG2394|consensus	636		99.65
KOG1523|consensus	361		99.65
COG2319	466	FOG: WD40 repeat [General function prediction only	99.65
KOG1240|consensus	1431		99.65
PRK11028	330	6-phosphogluconolactonase; Provisional	99.65
KOG4378|consensus	673		99.65
KOG1009|consensus	434		99.65
KOG1310|consensus	758		99.64
KOG1963|consensus	792		99.63
KOG4328|consensus	498		99.63
KOG0771|consensus	398		99.62
PRK03629	429	tolB translocation protein TolB; Provisional	99.62
KOG2315|consensus	566		99.61
KOG0303|consensus	472		99.61
PRK01742	429	tolB translocation protein TolB; Provisional	99.6
KOG1007|consensus	370		99.6
KOG2394|consensus	636		99.59
PRK02889	427	tolB translocation protein TolB; Provisional	99.58
KOG0290|consensus	364		99.57
PRK04922	433	tolB translocation protein TolB; Provisional	99.56
PRK05137	435	tolB translocation protein TolB; Provisional	99.55
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.55
KOG0644|consensus	1113		99.53
KOG0771|consensus	398		99.53
KOG0649|consensus	325		99.53
KOG1272|consensus	545		99.53
PRK05137	435	tolB translocation protein TolB; Provisional	99.51
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.51
KOG1409|consensus	404		99.51
PRK03629	429	tolB translocation protein TolB; Provisional	99.51
KOG2139|consensus	445		99.5
KOG1523|consensus	361		99.5
KOG0290|consensus	364		99.49
KOG1188|consensus	376		99.49
KOG2110|consensus	391		99.49
KOG0642|consensus	577		99.48
KOG1587|consensus	555		99.48
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.47
PRK02889	427	tolB translocation protein TolB; Provisional	99.47
KOG1587|consensus	555		99.47
KOG4227|consensus	609		99.46
COG4946	668	Uncharacterized protein related to the periplasmic	99.46
KOG2321|consensus	703		99.45
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.45
KOG2314|consensus	698		99.44
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.43
KOG1310|consensus	758		99.42
KOG3881|consensus	412		99.42
KOG2315|consensus	566		99.42
PRK04922	433	tolB translocation protein TolB; Provisional	99.41
PRK00178	430	tolB translocation protein TolB; Provisional	99.41
KOG0974|consensus	967		99.41
KOG2139|consensus	445		99.4
PRK04792	448	tolB translocation protein TolB; Provisional	99.4
KOG2111|consensus	346		99.4
PRK01029	428	tolB translocation protein TolB; Provisional	99.39
KOG1912|consensus	1062		99.38
KOG1240|consensus	1431		99.38
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.37
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.37
KOG1517|consensus	1387		99.37
KOG1272|consensus	545		99.36
KOG0322|consensus	323		99.35
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.34
PRK01029	428	tolB translocation protein TolB; Provisional	99.34
KOG1334|consensus	559		99.33
KOG0974|consensus	967		99.31
KOG2111|consensus	346		99.31
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.31
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.3
KOG3881|consensus	412		99.3
KOG1354|consensus	433		99.29
KOG2041|consensus	1189		99.29
PRK00178	430	tolB translocation protein TolB; Provisional	99.29
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.29
KOG2314|consensus	698		99.27
KOG2041|consensus	1189		99.25
PRK04792	448	tolB translocation protein TolB; Provisional	99.24
COG4946	668	Uncharacterized protein related to the periplasmic	99.24
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.22
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.19
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.17
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.15
KOG4547|consensus	541		99.12
KOG4547|consensus	541		99.11
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.1
PRK04043	419	tolB translocation protein TolB; Provisional	99.08
KOG2321|consensus	703		99.08
PRK04043	419	tolB translocation protein TolB; Provisional	99.06
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.04
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.0
KOG1912|consensus	1062		98.99
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.96
KOG1409|consensus	404		98.94
KOG0280|consensus	339		98.93
KOG0280|consensus	339		98.87
KOG0309|consensus	1081		98.87
KOG1064|consensus	2439		98.85
KOG3914|consensus	390		98.83
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.78
KOG3914|consensus	390		98.77
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.77
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.77
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.76
KOG0882|consensus	558		98.75
PRK02888	635	nitrous-oxide reductase; Validated	98.7
KOG1064|consensus	2439		98.7
KOG1354|consensus	433		98.68
KOG1897|consensus	1096		98.67
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.63
KOG4649|consensus	354		98.63
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.57
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.56
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.56
KOG4190|consensus	1034		98.56
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.55
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.55
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.49
KOG2066|consensus	846		98.48
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.48
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.47
KOG4532|consensus	344		98.45
KOG0309|consensus	1081		98.44
KOG1920|consensus	1265		98.44
KOG4649|consensus	354		98.42
KOG2695|consensus	425		98.42
KOG4532|consensus	344		98.41
KOG1832|consensus	1516		98.37
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.35
PRK02888	635	nitrous-oxide reductase; Validated	98.31
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.31
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.3
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.3
KOG1645|consensus	463		98.28
KOG4190|consensus	1034		98.28
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.26
KOG2695|consensus	425		98.26
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.25
KOG4714|consensus	319		98.25
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.24
KOG2066|consensus	846		98.24
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.22
KOG3621|consensus	726		98.21
KOG4714|consensus	319		98.21
KOG1920|consensus	1265		98.16
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.11
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.1
KOG1275|consensus	1118		98.1
KOG3617|consensus	1416		98.08
KOG1645|consensus	463		98.05
KOG3617|consensus	1416		98.05
KOG1275|consensus	1118		98.0
KOG0882|consensus	558		97.98
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.97
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.95
KOG3621|consensus	726		97.93
KOG2114|consensus	933		97.9
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.84
KOG2114|consensus	933		97.83
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.82
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.76
PRK13616	591	lipoprotein LpqB; Provisional	97.75
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.73
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.72
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.68
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.67
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.66
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.62
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.62
COG3391	381	Uncharacterized conserved protein [Function unknow	97.58
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.53
KOG1897|consensus	1096		97.5
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.44
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.44
KOG1832|consensus	1516		97.37
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.36
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.34
KOG4640|consensus	665		97.29
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.28
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.25
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.25
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.25
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.23
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	97.19
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.17
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.16
COG3391	381	Uncharacterized conserved protein [Function unknow	97.14
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.09
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.08
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.0
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.97
KOG1898|consensus	1205		96.93
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.93
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.88
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.85
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.81
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.81
PRK13616	591	lipoprotein LpqB; Provisional	96.76
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	96.57
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.54
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.52
KOG1008|consensus	783		96.5
PRK10115	686	protease 2; Provisional	96.5
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.42
KOG4640|consensus	665		96.4
KOG1008|consensus	783		96.4
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	96.33
KOG2395|consensus	644		96.28
COG5276	370	Uncharacterized conserved protein [Function unknow	96.23
COG3292	671	Predicted periplasmic ligand-binding sensor domain	96.21
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.14
KOG2395|consensus	644		96.11
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.97
KOG2079|consensus	1206		95.96
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	95.94
KOG1916|consensus	1283		95.91
PRK13684	334	Ycf48-like protein; Provisional	95.77
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.76
KOG4499|consensus	310		95.67
KOG2444|consensus	238		95.57
KOG4659|consensus	1899		95.55
KOG2444|consensus	238		95.54
PF14727	418	PHTB1_N: PTHB1 N-terminus	95.54
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.53
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.47
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	95.45
KOG2280|consensus	829		95.43
KOG2079|consensus	1206		95.4
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	95.31
PRK10115	686	protease 2; Provisional	95.23
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.12
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.07
PF11725	1774	AvrE: Pathogenicity factor; InterPro: IPR021085 Th	95.05
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	94.78
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	94.64
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	94.6
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.54
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	94.53
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	94.53
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.51
KOG3630|consensus	1405		94.38
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.32
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	94.3
KOG1916|consensus	1283		94.27
KOG4659|consensus	1899		94.25
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	94.22
PF13449	326	Phytase-like: Esterase-like activity of phytase	94.19
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.08
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	94.01
KOG1983|consensus	993		93.82
KOG1898|consensus	1205		93.79
PHA02713	557	hypothetical protein; Provisional	93.79
PF11725	1774	AvrE: Pathogenicity factor; InterPro: IPR021085 Th	93.42
PHA02713	557	hypothetical protein; Provisional	93.36
PRK13684	334	Ycf48-like protein; Provisional	93.08
KOG4499|consensus	310		92.98
KOG4460|consensus	741		92.86
PHA03098	534	kelch-like protein; Provisional	92.85
KOG4441|consensus	571		92.48
COG4247	364	Phy 3-phytase (myo-inositol-hexaphosphate 3-phosph	92.38
PF13449	326	Phytase-like: Esterase-like activity of phytase	92.3
PHA02790	480	Kelch-like protein; Provisional	91.76
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	91.62
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	91.61
PLN00033	398	photosystem II stability/assembly factor; Provisio	91.6
KOG2247|consensus	615		91.51
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	91.46
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	91.44
PRK13615	557	lipoprotein LpqB; Provisional	91.22
KOG4441|consensus	571		91.17
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	91.16
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	90.58
KOG2377|consensus	657		90.49
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	90.47
COG5167	776	VID27 Protein involved in vacuole import and degra	90.4
COG1770	682	PtrB Protease II [Amino acid transport and metabol	90.38
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	90.31
KOG3616|consensus	1636		90.24
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	90.12
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	90.08
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	89.76
PRK13614	573	lipoprotein LpqB; Provisional	89.59
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	89.46
COG3292	671	Predicted periplasmic ligand-binding sensor domain	89.34
KOG2280|consensus	829		89.1
PF09826	521	Beta_propel: Beta propeller domain; InterPro: IPR0	89.06
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	89.01
PRK05560	805	DNA gyrase subunit A; Validated	88.95
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	88.85
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	88.65
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	88.52
KOG4460|consensus	741		88.5
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	88.36
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	88.22
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	88.2
PRK13613	599	lipoprotein LpqB; Provisional	87.91
TIGR01063	800	gyrA DNA gyrase, A subunit. This model describes t	87.85
KOG3630|consensus	1405		87.84
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	87.4
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	87.35
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	87.33
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	87.18
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	87.09
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	86.57
TIGR01063	800	gyrA DNA gyrase, A subunit. This model describes t	86.44
KOG1900|consensus	1311		86.42
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	86.27
PLN02153	341	epithiospecifier protein	85.89
KOG1896|consensus	1366		85.85
PHA03098	534	kelch-like protein; Provisional	85.56
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	85.44
COG1520	370	FOG: WD40-like repeat [Function unknown]	85.16
KOG2377|consensus	657		85.02
COG5276	370	Uncharacterized conserved protein [Function unknow	84.86
KOG2109|consensus	788		83.52
PF12768	281	Rax2: Cortical protein marker for cell polarity	82.36
PLN00033	398	photosystem II stability/assembly factor; Provisio	82.17

>KOG0271|consensus

Probab=100.00  E-value=1.2e-46  Score=381.75  Aligned_cols=355  Identities=17%  Similarity=0.273  Sum_probs=277.1

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.||.+.|.|++|+|+|++|++|+.|-++|+||+.+..++...++|..                         .|.||+
T Consensus       110 S~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~-------------------------WVlcva  164 (480)
T KOG0271|consen  110 SIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKN-------------------------WVLCVA  164 (480)
T ss_pred             ccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCcc-------------------------EEEEEE
Confidence            6779999999999999999999999999999999999999999999998                         788888


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEE-EEe-CCCCeeEEEEcC-----CCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLK-TYT-TERPVNSAALSP-----ILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~-~~~-~~~~v~~l~~sp-----dg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      |+|||+.||+|+.||.|++||.++|+++. .+. |...|.+|+|.|     .+++|++++.|+.              |+
T Consensus       165 wsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~--------------vr  230 (480)
T KOG0271|consen  165 WSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGS--------------VR  230 (480)
T ss_pred             ECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCC--------------EE
Confidence            99999999999999999999999988764 455 468999999975     5789999999997              99


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc----cCCCceeeeEECcCCcEEEecCCe
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI----SEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~----~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                      |||+..+.++..+.||...|.||.|-.+| +|++|+.|++|++|+...+..+    .+.+++..++.+-|-.+-      
T Consensus       231 IWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LR------  303 (480)
T KOG0271|consen  231 IWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLR------  303 (480)
T ss_pred             EEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhh------
Confidence            99999999999999999999999997554 8999999999999999887644    245566666555432211      


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceE-EechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVE-LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~-l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                           ...|..       .+     ..+. +.+..+..+.+....                                   
T Consensus       304 -----tgaf~~-------t~-----~~~~~~se~~~~Al~rY~~~-----------------------------------  331 (480)
T KOG0271|consen  304 -----TGAFDH-------TG-----RKPKSFSEEQKKALERYEAV-----------------------------------  331 (480)
T ss_pred             -----cccccc-------cc-----ccCCChHHHHHHHHHHHHHh-----------------------------------
Confidence                 000000       00     0000 001111111111000                                   


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                      ....|++++.++       +...+++|....      ..+.+....+|...|..+.||||+++||+++.|+.|++|+.++
T Consensus       332 ~~~~~erlVSgs-------Dd~tlflW~p~~------~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~t  398 (480)
T KOG0271|consen  332 LKDSGERLVSGS-------DDFTLFLWNPFK------SKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRT  398 (480)
T ss_pred             hccCcceeEEec-------CCceEEEecccc------cccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCC
Confidence            011112222221       222355553211      1123335678999999999999999999999999999999999


Q ss_pred             Cceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCc
Q psy10063        792 NKATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF  868 (894)
Q Consensus       792 ~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~  868 (894)
                      ++.+..   +...+..++|+.|.+.|++++.|.    +|+|||+++.++...|.||.++|.++.|+|||+.+++|+.|+.
T Consensus       399 Gk~lasfRGHv~~VYqvawsaDsRLlVS~SkDs----TLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv  474 (480)
T KOG0271|consen  399 GKFLASFRGHVAAVYQVAWSADSRLLVSGSKDS----TLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKV  474 (480)
T ss_pred             cchhhhhhhccceeEEEEeccCccEEEEcCCCc----eEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceE
Confidence            998654   556677889999999999999998    6999999999999999999999999999999999999999999


Q ss_pred             EEEEe
Q psy10063        869 VRLHT  873 (894)
Q Consensus       869 V~vWd  873 (894)
                      ++||.
T Consensus       475 ~~lw~  479 (480)
T KOG0271|consen  475 LRLWR  479 (480)
T ss_pred             EEeec
Confidence            99996

>KOG0318|consensus

Probab=100.00  E-value=9.4e-38  Score=329.11  Aligned_cols=448  Identities=17%  Similarity=0.193  Sum_probs=319.0

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAV---  476 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---  476 (894)
                      ..++.+|...|+-..|||.|.|||+|...|.|||||....+.  ..+|+.-.+ +|..|+|+.|+++|+..++...-   
T Consensus        52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG-~I~Di~Wd~ds~RI~avGEGrerfg~  130 (603)
T KOG0318|consen   52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAG-PIKDISWDFDSKRIAAVGEGRERFGH  130 (603)
T ss_pred             eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeeccc-ccccceeCCCCcEEEEEecCccceeE
Confidence            347789999999999999999999999999999999876433  234555555 99999999999999887764322   


Q ss_pred             -----------------cceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEEC
Q psy10063        477 -----------------EPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       477 -----------------~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~  537 (894)
                                       +.|.+++|-|.. -++++|++|..|.+|+-.-.+....+.. ..-|.|+.|+|||.++++++.
T Consensus       131 ~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs  210 (603)
T KOG0318|consen  131 VFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS  210 (603)
T ss_pred             EEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC
Confidence                             688999998844 4799999999999998666666666654 567999999999999999999


Q ss_pred             CCCeEEEeccCccceeeEEEEeccccceEEEcc---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC----
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIFEEEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE----  610 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~----  610 (894)
                      |+.              +.+||-.+|+.+..|.   +|++.|.+|+|+||+..|++++.|..++|||+...+.+..    
T Consensus       211 Dgk--------------i~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~  276 (603)
T KOG0318|consen  211 DGK--------------IYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMG  276 (603)
T ss_pred             Ccc--------------EEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecC
Confidence            997              8899999999999997   8999999999999999999999999999999998764421    


Q ss_pred             ---CCceeeeEECcCCcEEEecCCeEEEEecccCC-----------------CCCCCeeeeccccCCCceEEechhhHHH
Q psy10063        611 ---GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS-----------------STDTGGVFSGSRVDDSGVELTKDEQIEM  670 (894)
Q Consensus       611 ---~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~-----------------~~d~~~i~sgs~~~d~~i~l~~~~~~~~  670 (894)
                         +.+...+.|..+..+.++.+|.+..+......                 .+++..+++|+  .|+.|.-|+.+.+..
T Consensus       277 ~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgs--yDG~I~~W~~~~g~~  354 (603)
T KOG0318|consen  277 STVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGS--YDGHINSWDSGSGTS  354 (603)
T ss_pred             CchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeec--cCceEEEEecCCccc
Confidence               23444555665555556666655554432211                 24667788888  899999999876654


Q ss_pred             hhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe---------eeEEEcCCCCEEEecccCccccccCCcceeeccc
Q psy10063        671 ARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR---------NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI  741 (894)
Q Consensus       671 ~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~---------~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~  741 (894)
                      .+. ....|..+...+...+....+...-+..+..-.         ..+.+..+...+++...+..        .+....
T Consensus       355 ~~~-~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~--------avv~~~  425 (603)
T KOG0318|consen  355 DRL-AGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGT--------AVVACI  425 (603)
T ss_pred             ccc-ccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCE--------EEEEec
Confidence            321 112233333333333333334443333332221         00111222222222111111        111111


Q ss_pred             cCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-----eeccccCCCceEeecCCCeEEE
Q psy10063        742 EGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-----TAGFLLSCPDFLFDFDTTREVT  816 (894)
Q Consensus       742 ~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-----~~~~~~~~~~~~fS~dg~~l~~  816 (894)
                      .+..+..+......+ ...-...+++++|++.++|+|+.|+.|+||.+....+     +..+...+..++||||+.+|++
T Consensus       426 ~~iv~l~~~~~~~~~-~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~  504 (603)
T KOG0318|consen  426 SDIVLLQDQTKVSSI-PIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAA  504 (603)
T ss_pred             CcEEEEecCCcceee-ccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEE
Confidence            111111111111111 1223456899999999999999999999999876553     4556677889999999999999


Q ss_pred             EecCCCCceeEEEeecCCccee-eeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063        817 TTSTKVGKFDARFYHLIFEEEF-ARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       817 as~d~~g~~~I~vwd~~tg~~l-~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      +...+    .|.+||+.+.+.. ..+.-|...|.+|+|+|+.++||+||.|-.|.||+++...-.
T Consensus       505 ~Da~r----kvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~  565 (603)
T KOG0318|consen  505 GDASR----KVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH  565 (603)
T ss_pred             eccCC----cEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh
Confidence            88877    5999999988764 334459999999999999999999999999999999876443

>KOG0291|consensus

Probab=100.00  E-value=4.5e-38  Score=343.60  Aligned_cols=427  Identities=18%  Similarity=0.233  Sum_probs=339.0

Q ss_pred             cceeeeeccCccEEEecCCCeEE------------------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC
Q psy10063        380 VDRLNSMSPAARKLATNAEPVVK------------------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG  441 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~~~~------------------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg  441 (894)
                      ....+.|||+|++++.+.+..++                  ..+.||-..|.+|.|+.|.++|++|+.|..++||+++..
T Consensus        98 ~v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~  177 (893)
T KOG0291|consen   98 GVGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGN  177 (893)
T ss_pred             ccceEEECCCCcEEEEEecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccc
Confidence            44567899999999987664333                  366789999999999999999999999999999999876


Q ss_pred             eE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------------------------------
Q psy10063        442 RE--LESISGHAKEPINDMQFSKDATMFITASHSQAV-------------------------------------------  476 (894)
Q Consensus       442 ~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------------------------------  476 (894)
                      +-  .+.+.+|+. .|.++-|..+...|++.+.||.+                                           
T Consensus       178 k~~~~~~l~gHkd-~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~  256 (893)
T KOG0291|consen  178 KNLFTYALNGHKD-YVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKT  256 (893)
T ss_pred             cccceEeccCCCc-ceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEE
Confidence            66  667789998 99999999888888888777755                                           


Q ss_pred             ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                               ..|.+.+|++.-.+||+|-..|.+.+|++.+..+++.+.. +.+|..++|+..|.+|+.|+..-.      
T Consensus       257 ~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klg------  330 (893)
T KOG0291|consen  257 KKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLG------  330 (893)
T ss_pred             EeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccc------
Confidence                     2678889999999999999999999999999999999986 589999999999999999988733      


Q ss_pred             cCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcC
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPD  622 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spd  622 (894)
                             .+.||++++...+.+..+|...+.+++++|||++|++|++||.|+|||...+.++.    +...+..+.|...
T Consensus       331 -------QLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~  403 (893)
T KOG0291|consen  331 -------QLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR  403 (893)
T ss_pred             -------eEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEec
Confidence                   28899999999999999999999999999999999999999999999998876542    3445555666655


Q ss_pred             CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063        623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ  702 (894)
Q Consensus       623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~  702 (894)
                      |..+                       ++.+  -|+.|+.|+.....-.                       ..|.....
T Consensus       404 g~~l-----------------------lssS--LDGtVRAwDlkRYrNf-----------------------RTft~P~p  435 (893)
T KOG0291|consen  404 GNVL-----------------------LSSS--LDGTVRAWDLKRYRNF-----------------------RTFTSPEP  435 (893)
T ss_pred             CCEE-----------------------EEee--cCCeEEeeeeccccee-----------------------eeecCCCc
Confidence            5544                       3333  4566666653322111                       11111111


Q ss_pred             eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC
Q psy10063        703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK  782 (894)
Q Consensus       703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg  782 (894)
                      +...  .++..+.|.++..+..+      ...+++|..+.|+       .+.++.||+++|.+++|+|++..||++++|+
T Consensus       436 ~Qfs--cvavD~sGelV~AG~~d------~F~IfvWS~qTGq-------llDiLsGHEgPVs~l~f~~~~~~LaS~SWDk  500 (893)
T KOG0291|consen  436 IQFS--CVAVDPSGELVCAGAQD------SFEIFVWSVQTGQ-------LLDILSGHEGPVSGLSFSPDGSLLASGSWDK  500 (893)
T ss_pred             eeee--EEEEcCCCCEEEeeccc------eEEEEEEEeecCe-------eeehhcCCCCcceeeEEccccCeEEeccccc
Confidence            1111  25556667777765533      4467888766554       4468999999999999999999999999999


Q ss_pred             cEEEEEccCCce---eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC----------------
Q psy10063        783 VSERYRDRKNKA---TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG----------------  843 (894)
Q Consensus       783 ~I~iwd~~~~~~---~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g----------------  843 (894)
                      +||+|++-....   ...+...+..+.|+|||+.++++.-++    .|.+||.+.+..+..+.|                
T Consensus       501 TVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldg----qItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta  576 (893)
T KOG0291|consen  501 TVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDG----QITFFDIKEAVQVGSIDGRKDLSGGRKETDRITA  576 (893)
T ss_pred             eEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecc----eEEEEEhhhceeeccccchhhccccccccceeeh
Confidence            999999765532   233445566788999999999999998    599999988766644332                


Q ss_pred             ----CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCc
Q psy10063        844 ----HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISE  887 (894)
Q Consensus       844 ----H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~  887 (894)
                          ....++.|+||+||.+|++||....|+||++.++.++.+|++..
T Consensus       577 ~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~  624 (893)
T KOG0291|consen  577 ENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQISD  624 (893)
T ss_pred             hhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEEecc
Confidence                12467899999999999999999999999999999999998654

>KOG0272|consensus

Probab=100.00  E-value=3.9e-40  Score=339.20  Aligned_cols=279  Identities=21%  Similarity=0.245  Sum_probs=253.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      |...+|..+.||.|++.|++|+.+|.++||...++..++.|.+|..                         .|.++.|+|
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~-------------------------~v~~~~fhP  227 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTS-------------------------RVGAAVFHP  227 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEecccc-------------------------ceeeEEEcc
Confidence            5678999999999999999999999999999999999999999998                         555566666


Q ss_pred             C--CCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        487 D--ATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       487 d--g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      .  +..||+|+.||.|++|++....++..+.+ ..+|..++|+|+|++|++++.|..              .|+||+.++
T Consensus       228 ~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~t--------------WRlWD~~tk  293 (459)
T KOG0272|consen  228 VDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDST--------------WRLWDLETK  293 (459)
T ss_pred             CCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccc--------------hhhcccccc
Confidence            3  66899999999999999999899998886 489999999999999999999997              899999999


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      +++....||...|.+|+|.+||.++++|+.|..-+|||+++++.+                                   
T Consensus       294 ~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~i-----------------------------------  338 (459)
T KOG0272|consen  294 SELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCI-----------------------------------  338 (459)
T ss_pred             hhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEE-----------------------------------
Confidence            999999999999999999999999999999999999999876421                                   


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                                                                                      
T Consensus       339 --------------------------------------------------------------------------------  338 (459)
T KOG0272|consen  339 --------------------------------------------------------------------------------  338 (459)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc---c
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL---L  800 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---~  800 (894)
                                                    .++.+|...|+.|+|+|.|..||+|+.|++++|||++..+.+..+.   .
T Consensus       339 ------------------------------m~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~n  388 (459)
T KOG0272|consen  339 ------------------------------MFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSN  388 (459)
T ss_pred             ------------------------------EEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccc
Confidence                                          1356788999999999999999999999999999999888755444   4


Q ss_pred             CCCceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        801 SCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       801 ~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      -+..++|+| .|.+|++++.|.    .++||.-.++.+++.|.||.+.|.+|.+++|+.+|++++.|.+|++|.
T Consensus       389 lVS~Vk~~p~~g~fL~TasyD~----t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  389 LVSQVKYSPQEGYFLVTASYDN----TVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             hhhheEecccCCeEEEEcccCc----ceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            466888998 788899999987    599999999999999999999999999999999999999999999995

>KOG0271|consensus

Probab=100.00  E-value=8.2e-40  Score=332.05  Aligned_cols=330  Identities=19%  Similarity=0.230  Sum_probs=242.1

Q ss_pred             CccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        475 AVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       475 ~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      +-+.|.|++|+|+|.+|++|+.|.++||||+.+..++...++ ...|.|++|+|||+.|++|+.++.             
T Consensus       114 H~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~-------------  180 (480)
T KOG0271|consen  114 HGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS-------------  180 (480)
T ss_pred             CCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCe-------------
Confidence            334899999999999999999999999999999999999985 589999999999999999999997             


Q ss_pred             eEEEEeccccceE-EEccCCCCCeEEEEEec-----CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        554 DARFYHLIFEEEF-ARIKGHFGPINSLAFHP-----DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       554 ~v~vwd~~~~~~~-~~l~~h~~~V~~l~~sp-----dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                       |++||.++|+++ +.|.+|..+|.+|+|.|     ..++|++++.||.|+|||+..+..+                  .
T Consensus       181 -I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~------------------~  241 (480)
T KOG0271|consen  181 -IRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV------------------R  241 (480)
T ss_pred             -EEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE------------------E
Confidence             899999888765 46899999999999986     5779999999999999999776432                  3


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                      ...||...+.++.+.  ....+++|+  .|+.|++|+..+..+.+......+.                          .
T Consensus       242 ~lsgHT~~VTCvrwG--G~gliySgS--~DrtIkvw~a~dG~~~r~lkGHahw--------------------------v  291 (480)
T KOG0271|consen  242 TLSGHTASVTCVRWG--GEGLIYSGS--QDRTIKVWRALDGKLCRELKGHAHW--------------------------V  291 (480)
T ss_pred             EeccCccceEEEEEc--CCceEEecC--CCceEEEEEccchhHHHhhcccchh--------------------------e
Confidence            334444444444332  345677777  7999999997766554322211111                          0


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                      ..++++.+ ..+..++++..               +.......+..+.....    +..+.-..++.|++|+.|..+.+|
T Consensus       292 N~lalsTd-y~LRtgaf~~t---------------~~~~~~~se~~~~Al~r----Y~~~~~~~~erlVSgsDd~tlflW  351 (480)
T KOG0271|consen  292 NHLALSTD-YVLRTGAFDHT---------------GRKPKSFSEEQKKALER----YEAVLKDSGERLVSGSDDFTLFLW  351 (480)
T ss_pred             eeeeccch-hhhhccccccc---------------cccCCChHHHHHHHHHH----HHHhhccCcceeEEecCCceEEEe
Confidence            11111100 00111111110               00000000000000000    011111236899999999999999


Q ss_pred             EccCCc----eeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEe
Q psy10063        788 RDRKNK----ATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG  863 (894)
Q Consensus       788 d~~~~~----~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~  863 (894)
                      +-...+    .+.++..-+..+.||||++++++++-|+    .|++||.++|+.+..|+||-+.|..|+|+.|.++|++|
T Consensus       352 ~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDk----SVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~  427 (480)
T KOG0271|consen  352 NPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDK----SVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSG  427 (480)
T ss_pred             cccccccchhhhhchhhheeeEEECCCccEEEEeeccc----ceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEc
Confidence            977665    3556666677889999999999999999    59999999999999999999999999999999999999


Q ss_pred             cCCCcEEEEecCccccccccc-cCcccc
Q psy10063        864 GEDGFVRLHTFDQAYFDYTFD-ISEEFH  890 (894)
Q Consensus       864 s~Dg~V~vWdl~~~~~~~~~~-~~~~~~  890 (894)
                      |.|.+|+||++..+++.+.+- ..+++|
T Consensus       428 SkDsTLKvw~V~tkKl~~DLpGh~DEVf  455 (480)
T KOG0271|consen  428 SKDSTLKVWDVRTKKLKQDLPGHADEVF  455 (480)
T ss_pred             CCCceEEEEEeeeeeecccCCCCCceEE
Confidence            999999999999999887765 445554

>KOG0318|consensus

Probab=100.00  E-value=9.6e-36  Score=313.96  Aligned_cols=438  Identities=18%  Similarity=0.226  Sum_probs=321.3

Q ss_pred             eeeccCccEEEecCCCeEEE-------------EEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063        384 NSMSPAARKLATNAEPVVKM-------------QVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISG  449 (894)
Q Consensus       384 ~~~s~dg~~l~~~~~~~~~~-------------~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~  449 (894)
                      ++|+.|+++|+..+++.-++             .+.||...|.+++|-|..- ++++|++|..|.+|+-.--+....++.
T Consensus       109 i~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~  188 (603)
T KOG0318|consen  109 ISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFRE  188 (603)
T ss_pred             ceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccc
Confidence            46889999998776653332             6778999999999998655 899999999999999777777888889


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCCCc---------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063        450 HAKEPINDMQFSKDATMFITASHSQAV---------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~d~~i---------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~  508 (894)
                      |.. .|.|+.|+|||.++++++.|+++                     +.|.+|+|+||+.+|++++.|.++||||+.+.
T Consensus       189 Hsk-FV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~  267 (603)
T KOG0318|consen  189 HSK-FVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN  267 (603)
T ss_pred             ccc-ceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence            998 99999999999999999999887                     68999999999999999999999999999999


Q ss_pred             cEEEEEeCCC----CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecC
Q psy10063        509 QLLKTYTTER----PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  584 (894)
Q Consensus       509 ~~~~~~~~~~----~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd  584 (894)
                      ++++++....    ....+.|-  ..+|++.+..|.              |.+++......++.+.||...|.+|..++|
T Consensus       268 slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~--------------in~ln~~d~~~~~~i~GHnK~ITaLtv~~d  331 (603)
T KOG0318|consen  268 SLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGT--------------INYLNPSDPSVLKVISGHNKSITALTVSPD  331 (603)
T ss_pred             ceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcE--------------EEEecccCCChhheecccccceeEEEEcCC
Confidence            9999987543    34455565  668888888886              788888888888999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEECcCCcEE-EecCCeEEEEecccCCCCCCCeeeeccccCCC
Q psy10063        585 GKSYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQQPDGLVY-PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDS  658 (894)
Q Consensus       585 g~~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~spdg~~l-~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~  658 (894)
                      +++|++|+.||.|.-|+...+..-     .+...+..++....+.++ .+.+..+..+............+-.+++  ..
T Consensus       332 ~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~Q--P~  409 (603)
T KOG0318|consen  332 GKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQ--PK  409 (603)
T ss_pred             CCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCC--ce
Confidence            999999999999999999887632     134455566665544444 4445555544332111111111111110  00


Q ss_pred             ceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE-eccCc--ceeEEeeeEEEcCCCCEEEecccCccccccCCcc
Q psy10063        659 GVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE-LTKDE--QIEMARNRMSINHSGTRLHVNPFDEQQSVDASPL  735 (894)
Q Consensus       659 ~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~s~~~--~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l  735 (894)
                      .+               ....++..+.+........+. +....  .+......+++++++..++++..++.       +
T Consensus       410 ~l---------------av~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgk-------v  467 (603)
T KOG0318|consen  410 GL---------------AVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGK-------V  467 (603)
T ss_pred             eE---------------EEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccce-------E
Confidence            11               111111122221111111111 00000  12222345778888888888776654       3


Q ss_pred             eeeccccCcccccCC---CCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----cCCCceEee
Q psy10063        736 MTWGHIEGTPFKLDG---SDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL----LSCPDFLFD  808 (894)
Q Consensus       736 ~~~~~~~g~~~~~dg---~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~----~~~~~~~fS  808 (894)
                      .++        ++.|   .+..++..|...|.+++||||+.|||++...+.+.+||+.+.+......    ..+..++|+
T Consensus       468 hvy--------sl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWs  539 (603)
T KOG0318|consen  468 HVY--------SLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWS  539 (603)
T ss_pred             EEE--------EecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeC
Confidence            332        3333   2223566799999999999999999999999999999998887733222    334578899


Q ss_pred             cCCCeEEEEecCCCCceeEEEeecCCc-ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        809 FDTTREVTTTSTKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       809 ~dg~~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      |+..++++++-|-    .|.||+++.- +.+....+|...|+.|.|-.+ ..|++.|.|..|++|.+.
T Consensus       540 P~n~~vATGSlDt----~Viiysv~kP~~~i~iknAH~~gVn~v~wlde-~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  540 PNNKLVATGSLDT----NVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDE-STVVSSGQDANIKVWNVT  602 (603)
T ss_pred             CCceEEEeccccc----eEEEEEccChhhheEeccccccCceeEEEecC-ceEEeccCcceeEEeccc
Confidence            9999999999997    5999999865 345555689999999999855 569999999999999974

>KOG0319|consensus

Probab=100.00  E-value=1e-36  Score=333.26  Aligned_cols=448  Identities=16%  Similarity=0.182  Sum_probs=345.2

Q ss_pred             eeeeeccCccEEEecCCCeEEE-----------EEec-CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063        382 RLNSMSPAARKLATNAEPVVKM-----------QVTD-QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG  449 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~~~~~-----------~l~~-H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~  449 (894)
                      ...++++|+++|.......+..           .++. |.++|.-++|+|.|.+|++|+.|+.|+|||+..+.+.+.|+|
T Consensus        66 ta~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG  145 (775)
T KOG0319|consen   66 TALALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKG  145 (775)
T ss_pred             heeeecCCccEEEEeeccceEEEEEcccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecC
Confidence            3457889988888766543222           2333 999999999999999999999999999999999999999999


Q ss_pred             CCCCCeeEEEEcCCCCE--EEEEeCCCCc-------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063        450 HAKEPINDMQFSKDATM--FITASHSQAV-------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~--la~~~~d~~i-------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~  508 (894)
                      |.+ .|..+.|+|+-.+  |++|..|+.+                   ..|.+++|++|+.-++++++|..|.|||+...
T Consensus       146 ~gG-vVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~  224 (775)
T KOG0319|consen  146 HGG-VVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQY  224 (775)
T ss_pred             CCc-eEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhh
Confidence            998 9999999997654  7777777766                   58999999999999999999999999999888


Q ss_pred             cEEEEEeCCCCeeEEEEcCC-----CCEEEEEECCCCeEEEeccCccce-----------------------------ee
Q psy10063        509 QLLKTYTTERPVNSAALSPI-----LPHVVLGGGQEAREVTTTSTKVGK-----------------------------FD  554 (894)
Q Consensus       509 ~~~~~~~~~~~v~~l~~spd-----g~~l~~~~~~~~~~v~~~~~~~~~-----------------------------~~  554 (894)
                      ++++.+..-..+.++.+-++     |.+++++|+++.+++|+.+...-.                             -.
T Consensus       225 ~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQn  304 (775)
T KOG0319|consen  225 KKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQN  304 (775)
T ss_pred             hhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccce
Confidence            88888887788888888887     779999999999999987643211                             13


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFH-PDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i  633 (894)
                      +.+||.++.+.++.+.|..+.|.+++|- |+.++|+.++..+.+|+|++.+...                +++..+...+
T Consensus       305 l~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c----------------~ii~GH~e~v  368 (775)
T KOG0319|consen  305 LFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYC----------------QIIPGHTEAV  368 (775)
T ss_pred             EEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCce----------------EEEeCchhhe
Confidence            7788889999999999999999999876 5678999999999999998765431                2444444455


Q ss_pred             EEEecccCCCCCCCeeeeccccCCCceEEechh--hHHHhhhcccccCCCCeEEeecc--CCcceeEeccCcceeEEeee
Q psy10063        634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDE--QIEMARNRMSINHSGTRLHVNPF--DEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~--~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~s~~~~~~~~~~~  709 (894)
                      ..+..    ...+..+++++  .|..+++|...  ............|.+....+...  .....+..+.|         
T Consensus       369 lSL~~----~~~g~llat~s--KD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D---------  433 (775)
T KOG0319|consen  369 LSLDV----WSSGDLLATGS--KDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQD---------  433 (775)
T ss_pred             eeeee----cccCcEEEEec--CCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCC---------
Confidence            55541    12345777777  89999999651  11122222223333332222211  11111111112         


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCc--ccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT--PFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~--~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                                             ..+++|+.....  .+.+.-........|...|.|++++|..++||+|+.|++.+||
T Consensus       434 -----------------------~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW  490 (775)
T KOG0319|consen  434 -----------------------CTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIW  490 (775)
T ss_pred             -----------------------ceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeee
Confidence                                   225666543311  1111111222456899999999999999999999999999999


Q ss_pred             EccCCce---eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEec
Q psy10063        788 RDRKNKA---TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG  864 (894)
Q Consensus       788 d~~~~~~---~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s  864 (894)
                      +++....   +.+|..++.++.|++..+.++++++|.    +|+||.+.+..|+..|.||...|..+.|-.+|+.|+||+
T Consensus       491 ~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~----TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~  566 (775)
T KOG0319|consen  491 DLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDK----TVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAG  566 (775)
T ss_pred             cccCceEEEEeeCCccceEEEEeccccceeEeccCCc----eEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEecc
Confidence            9996655   456677778899999999999999998    799999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCccccccccccCcc
Q psy10063        865 EDGFVRLHTFDQAYFDYTFDISEE  888 (894)
Q Consensus       865 ~Dg~V~vWdl~~~~~~~~~~~~~~  888 (894)
                      .||.|+||++...+++..++..+.
T Consensus       567 adGliKlWnikt~eC~~tlD~H~D  590 (775)
T KOG0319|consen  567 ADGLIKLWNIKTNECEMTLDAHND  590 (775)
T ss_pred             CCCcEEEEeccchhhhhhhhhccc
Confidence            999999999999999998876543

>KOG0286|consensus

Probab=100.00  E-value=3.9e-37  Score=303.34  Aligned_cols=284  Identities=16%  Similarity=0.262  Sum_probs=250.2

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .+..|+||...|.++.|++|+++|++++.||.+.|||..+...++.+.....                         .|.
T Consensus        47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~-------------------------WVM  101 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSS-------------------------WVM  101 (343)
T ss_pred             eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCce-------------------------eEE
Confidence            3468999999999999999999999999999999999998888888776665                         677


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCC------cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDR------QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~------~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .++|+|.|+++|+|+.|....||++...      +..+.+. |.+.+.|+.|-.| .+|+++++|..             
T Consensus       102 tCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~T-------------  167 (343)
T KOG0286|consen  102 TCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMT-------------  167 (343)
T ss_pred             EEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCce-------------
Confidence            7788888889999999999999998744      2334455 4578889999884 57888888886             


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                       ..+||+++|+.+..|.||.+.|.+|+++| +++.+++|+-|+..+|||++.+..                         
T Consensus       168 -CalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c-------------------------  221 (343)
T KOG0286|consen  168 -CALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQC-------------------------  221 (343)
T ss_pred             -EEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcce-------------------------
Confidence             89999999999999999999999999999 999999999999999999975421                         


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                                                                                                      
T Consensus       222 --------------------------------------------------------------------------------  221 (343)
T KOG0286|consen  222 --------------------------------------------------------------------------------  221 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN  792 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~  792 (894)
                                                              .+.+.+|+..|.++.|.|+|.-|++|+.|++.|+||++..
T Consensus       222 ----------------------------------------~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD  261 (343)
T KOG0286|consen  222 ----------------------------------------VQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRAD  261 (343)
T ss_pred             ----------------------------------------eEeecccccccceEEEccCCCeeeecCCCceeEEEeecCC
Confidence                                                    1235678899999999999999999999999999999998


Q ss_pred             ceeeccc-----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063        793 KATAGFL-----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  867 (894)
Q Consensus       793 ~~~~~~~-----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg  867 (894)
                      +++..+.     .++.+++||..|++|.++..|.    .+.|||.-.++.+..|.||..+|.+|..+|||.-|++||+|.
T Consensus       262 ~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~----~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs  337 (343)
T KOG0286|consen  262 QELAVYSHDSIICGITSVAFSKSGRLLFAGYDDF----TCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDS  337 (343)
T ss_pred             cEEeeeccCcccCCceeEEEcccccEEEeeecCC----ceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhH
Confidence            8866554     4567899999999999987776    699999999999999999999999999999999999999999


Q ss_pred             cEEEEe
Q psy10063        868 FVRLHT  873 (894)
Q Consensus       868 ~V~vWd  873 (894)
                      .||||.
T Consensus       338 ~lriW~  343 (343)
T KOG0286|consen  338 TLRIWA  343 (343)
T ss_pred             heeecC
Confidence            999994

>KOG0306|consensus

Probab=100.00  E-value=3.8e-34  Score=312.84  Aligned_cols=461  Identities=20%  Similarity=0.202  Sum_probs=342.3

Q ss_pred             ccCccEEEe-cCCCeEEEEEe-----------cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCC
Q psy10063        387 SPAARKLAT-NAEPVVKMQVT-----------DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEP  454 (894)
Q Consensus       387 s~dg~~l~~-~~~~~~~~~l~-----------~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~  454 (894)
                      +..|++++. +.+.+....++           +-...|+|++-+++.-+||.|..||.|+||++.++..+..|.+|+. .
T Consensus        31 ~~~Gr~va~~a~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~-A  109 (888)
T KOG0306|consen   31 SGKGRAVAVSALEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKA-A  109 (888)
T ss_pred             cCCCcEEEEeccccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeeccccc-c
Confidence            344888876 44444333222           3345899999999999999999999999999999999999999999 9


Q ss_pred             eeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-
Q psy10063        455 INDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-  515 (894)
Q Consensus       455 V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-  515 (894)
                      |.++.|+..|.+|++|+.|+.+                  ..|..+-|..+.++|++++.|+.|++||+++..|..++- 
T Consensus       110 Vt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd  189 (888)
T KOG0306|consen  110 VTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVD  189 (888)
T ss_pred             eEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEec
Confidence            9999999999999999999987                  356666777778899999999999999999999998765 


Q ss_pred             CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce---------------------------------e---------
Q psy10063        516 TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK---------------------------------F---------  553 (894)
Q Consensus       516 ~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~---------------------------------~---------  553 (894)
                      |.+.++++++.+  +.+++++.++.+.+|.+......                                 |         
T Consensus       190 ~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~  267 (888)
T KOG0306|consen  190 HRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKV  267 (888)
T ss_pred             ccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhh
Confidence            568999999987  78999999999999987211000                                 0         


Q ss_pred             ------------------------------------------------------eEE-----------------------
Q psy10063        554 ------------------------------------------------------DAR-----------------------  556 (894)
Q Consensus       554 ------------------------------------------------------~v~-----------------------  556 (894)
                                                                            .++                       
T Consensus       268 ~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~  347 (888)
T KOG0306|consen  268 IELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVE  347 (888)
T ss_pred             hhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceE
Confidence                                                                  011                       


Q ss_pred             EEeccc-cce--------EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC--CCceeeeEECcCCcE
Q psy10063        557 FYHLIF-EEE--------FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE--GSFTSSSTQQPDGLV  625 (894)
Q Consensus       557 vwd~~~-~~~--------~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~--~~~v~~~~~spdg~~  625 (894)
                      +|.+.. ++.        -..+.||+..|.+++++.+...+++|+ .+.|+||+.++.+.++.  ...+.+..|.|.+.+
T Consensus       348 ~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~  426 (888)
T KOG0306|consen  348 WYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYILASKFVPGDRY  426 (888)
T ss_pred             EEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccEEEEEecCCCce
Confidence            111111 000        022458999999999998877777665 57899999998887753  346778889998776


Q ss_pred             E--EecCCeEEEEecccC-----------------CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEe
Q psy10063        626 Y--PSQGGHIHSLSSHST-----------------SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHV  686 (894)
Q Consensus       626 l--~~~~g~i~~~~~~~~-----------------~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~  686 (894)
                      +  +...|.+..++....                 ..+|+..++.|+  .|..|++|+....        ....|....+
T Consensus       427 Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~s--aDktVkfWdf~l~--------~~~~gt~~k~  496 (888)
T KOG0306|consen  427 IVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGS--ADKTVKFWDFKLV--------VSVPGTQKKV  496 (888)
T ss_pred             EEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEec--CCcEEEEEeEEEE--------eccCccccee
Confidence            6  444555544443211                 136777888888  7999999983311        1111222121


Q ss_pred             eccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEE
Q psy10063        687 NPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKM  766 (894)
Q Consensus       687 ~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~l  766 (894)
                      ........+.+      ......++++|+|+.++++..+....+....              .-+..--+.||.-+|.||
T Consensus       497 lsl~~~rtLel------~ddvL~v~~Spdgk~LaVsLLdnTVkVyflD--------------tlKFflsLYGHkLPV~sm  556 (888)
T KOG0306|consen  497 LSLKHTRTLEL------EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLD--------------TLKFFLSLYGHKLPVLSM  556 (888)
T ss_pred             eeeccceEEec------cccEEEEEEcCCCcEEEEEeccCeEEEEEec--------------ceeeeeeecccccceeEE
Confidence            11111111111      1123457889999999998777664432211              011112367899999999


Q ss_pred             eeCCCCCEEEEecCCCcEEEEEccCCceeecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC
Q psy10063        767 PEPPKREKLALALADKVSERYRDRKNKATAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG  843 (894)
Q Consensus       767 a~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g  843 (894)
                      .+|||+++|++|+.|+.|+||-++=+.+.+.+   ...+..+.|.|+...+.+++.|+    .|+-||-+..+++..|.+
T Consensus       557 DIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~----kvKqWDg~kFe~iq~L~~  632 (888)
T KOG0306|consen  557 DISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDG----KVKQWDGEKFEEIQKLDG  632 (888)
T ss_pred             eccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcc----eEEeechhhhhhheeecc
Confidence            99999999999999999999998877775544   34556778999999999998887    599999999999999999


Q ss_pred             CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        844 HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       844 H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      |...|+|++.+|+|.+++++|.|..||+|......++.+.+.
T Consensus       633 H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde~~~lEeek  674 (888)
T KOG0306|consen  633 HHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDEILILEEEK  674 (888)
T ss_pred             chheeeeeEEcCCCCeEEeccCCceeEeeeccCcceeeehhh
Confidence            999999999999999999999999999999887766655443

>KOG0279|consensus

Probab=100.00  E-value=9.6e-35  Score=285.07  Aligned_cols=286  Identities=17%  Similarity=0.184  Sum_probs=243.7

Q ss_pred             eEEEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecC-----CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLR-----MGRELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~-----tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .++-.|.+|.+.|.+++..+. -+.|++++.|..|.+|++.     .|..++.|+||..                     
T Consensus         6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH---------------------   64 (315)
T KOG0279|consen    6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSH---------------------   64 (315)
T ss_pred             eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccce---------------------
Confidence            455689999999999999987 4589999999999999985     4677899999987                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                          .|..++.++||++.++++.|+.+++||+..|+..+.|.+ ...|.+++|++|.+.|++|+.|..            
T Consensus        65 ----~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkT------------  128 (315)
T KOG0279|consen   65 ----FVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKT------------  128 (315)
T ss_pred             ----EecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcce------------
Confidence                788899999999999999999999999999999998886 578999999999999999999998            


Q ss_pred             eeEEEEeccccceEEEccC--CCCCeEEEEEecC--CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEe
Q psy10063        553 FDARFYHLIFEEEFARIKG--HFGPINSLAFHPD--GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~spd--g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~  628 (894)
                        |++|+... .+...+..  |.+.|.|+.|+|.  ..+|++++.|+.|++||++..+..                    
T Consensus       129 --iklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~--------------------  185 (315)
T KOG0279|consen  129 --IKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLR--------------------  185 (315)
T ss_pred             --eeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchh--------------------
Confidence              88888874 44444433  3789999999997  679999999999999999754311                    


Q ss_pred             cCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEee
Q psy10063        629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARN  708 (894)
Q Consensus       629 ~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~  708 (894)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (315)
T KOG0279|consen  186 --------------------------------------------------------------------------------  185 (315)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063        709 RMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       709 ~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd  788 (894)
                                                                   ..+.+|.+.+..+++||||.++++|+.||.+.+||
T Consensus       186 ---------------------------------------------~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~Lwd  220 (315)
T KOG0279|consen  186 ---------------------------------------------TTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWD  220 (315)
T ss_pred             ---------------------------------------------hccccccccEEEEEECCCCCEEecCCCCceEEEEE
Confidence                                                         12345788899999999999999999999999999


Q ss_pred             ccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC----C-----CCCeeEEEEeeCC
Q psy10063        789 DRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG----H-----FGPINSLAFHPDG  857 (894)
Q Consensus       789 ~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g----H-----~~~V~~l~fSpdg  857 (894)
                      +..++.+..+.  ..+.+++|+|..-.|+.+.+..     |+|||++.++++..|+.    .     .-...+|+|++||
T Consensus       221 L~~~k~lysl~a~~~v~sl~fspnrywL~~at~~s-----IkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG  295 (315)
T KOG0279|consen  221 LNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATATS-----IKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADG  295 (315)
T ss_pred             ccCCceeEeccCCCeEeeEEecCCceeEeeccCCc-----eEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCC
Confidence            99999876554  4566889999999888888774     99999999988877652    1     2234578999999


Q ss_pred             cEEEEecCCCcEEEEecC
Q psy10063        858 KSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       858 ~~LaS~s~Dg~V~vWdl~  875 (894)
                      ..|+.|-.|+.|++|.+.
T Consensus       296 ~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  296 QTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             cEEEeeecCCcEEEEEee
Confidence            999999999999999985

>KOG0291|consensus

Probab=100.00  E-value=3.2e-33  Score=305.74  Aligned_cols=436  Identities=15%  Similarity=0.125  Sum_probs=318.8

Q ss_pred             ceeeeeccCccEEEecCCCeEEE-EEe---------cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC
Q psy10063        381 DRLNSMSPAARKLATNAEPVVKM-QVT---------DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH  450 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~~~~~-~l~---------~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h  450 (894)
                      ..-+.|++||..+.+..+..+.+ .|+         ++...|.+++.||+|.+|++..++|.+.+-.+.....++.+...
T Consensus        17 ~Gnl~ft~dG~sviSPvGNrvsv~dLknN~S~Tl~~e~~~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~fk   96 (893)
T KOG0291|consen   17 AGNLVFTKDGNSVISPVGNRVSVFDLKNNKSYTLPLETRYNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRFNFK   96 (893)
T ss_pred             cCcEEECCCCCEEEeccCCEEEEEEccCCcceeEEeecCCceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEEeec
Confidence            34567889988887766654333 222         47789999999999999999999999999999988888888765


Q ss_pred             CCCCeeEEEEcCCCCEEEEEeCCC-------------------------CccceEEEEEecCCCEEEEEECCCCEEEEEc
Q psy10063        451 AKEPINDMQFSKDATMFITASHSQ-------------------------AVEPINDMQFSKDATMFITASKDHTAKLFTT  505 (894)
Q Consensus       451 ~~~~V~~v~~spdg~~la~~~~d~-------------------------~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl  505 (894)
                      .  +|.+|.|||+|+++|++...-                         +...|.+|.|+.|.++|++|+.|-.++||++
T Consensus        97 ~--~v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v  174 (893)
T KOG0291|consen   97 R--GVGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGV  174 (893)
T ss_pred             C--ccceEEECCCCcEEEEEecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEe
Confidence            4  799999999999999886432                         1158999999999999999999999999999


Q ss_pred             CCCcEEEEE--e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE---------EEeccccce--------
Q psy10063        506 HDRQLLKTY--T-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR---------FYHLIFEEE--------  565 (894)
Q Consensus       506 ~~~~~~~~~--~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~---------vwd~~~~~~--------  565 (894)
                      +..+-+..+  . |.+.|.++.|..+...|++.+.+|.+.+|.++......+-.         .-..+.++.        
T Consensus       175 ~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~  254 (893)
T KOG0291|consen  175 DGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWY  254 (893)
T ss_pred             ccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEE
Confidence            876654433  3 56899999999999999999999999999887332111000         000000111        


Q ss_pred             ---EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        566 ---FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       566 ---~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                         ..-+......|.+.+|++.-..||+|-..|...+|.+.....+.    ....+..+.|...|.|+            
T Consensus       255 k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWi------------  322 (893)
T KOG0291|consen  255 KTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWI------------  322 (893)
T ss_pred             EEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEE------------
Confidence               11122233689999999999999999999999999997765442    12444555555555555            


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                                 +.|+. .-+.+.+|+......                          +-+..........+.+++||.+
T Consensus       323 -----------A~g~~-klgQLlVweWqsEsY--------------------------VlKQQgH~~~i~~l~YSpDgq~  364 (893)
T KOG0291|consen  323 -----------AFGCS-KLGQLLVWEWQSESY--------------------------VLKQQGHSDRITSLAYSPDGQL  364 (893)
T ss_pred             -----------EEcCC-ccceEEEEEeeccce--------------------------eeeccccccceeeEEECCCCcE
Confidence                       33331 122233332111100                          0001111222345788999999


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF  798 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~  798 (894)
                      ++.++.|+.       +++|+...|.++       ..+..|...|..+.|+..|+.|++++-||+||.||+..++..+.+
T Consensus       365 iaTG~eDgK-------VKvWn~~SgfC~-------vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTf  430 (893)
T KOG0291|consen  365 IATGAEDGK-------VKVWNTQSGFCF-------VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTF  430 (893)
T ss_pred             EEeccCCCc-------EEEEeccCceEE-------EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeee
Confidence            998876665       888977655443       578889999999999999999999999999999999999987776


Q ss_pred             ccCC--CceEe--ecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        799 LLSC--PDFLF--DFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       799 ~~~~--~~~~f--S~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      ....  .-.++  .|.|..+++++.+   .|+|+||++++|+++..|.||.++|.+|+|+|+|..||++|+|.+||+|++
T Consensus       431 t~P~p~QfscvavD~sGelV~AG~~d---~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  431 TSPEPIQFSCVAVDPSGELVCAGAQD---SFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDI  507 (893)
T ss_pred             cCCCceeeeEEEEcCCCCEEEeeccc---eEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEe
Confidence            6443  23344  4446666665555   368999999999999999999999999999999999999999999999997


Q ss_pred             Ccc-cccccccc
Q psy10063        875 DQA-YFDYTFDI  885 (894)
Q Consensus       875 ~~~-~~~~~~~~  885 (894)
                      -.. ..+..+++
T Consensus       508 f~s~~~vEtl~i  519 (893)
T KOG0291|consen  508 FSSSGTVETLEI  519 (893)
T ss_pred             eccCceeeeEee
Confidence            544 23344433

>KOG0319|consensus

Probab=100.00  E-value=1.5e-34  Score=316.37  Aligned_cols=446  Identities=15%  Similarity=0.167  Sum_probs=320.9

Q ss_pred             CCccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCC--EEEEecCCCcEEEEecCCCe-
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQ--YIITGHAKGDICTWDLRMGR-  442 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~tg~-  442 (894)
                      +..+....+|.+-|.+|+.++.+           ...+.|+||.+.|.++.|+|+-.  +|++|+.|+.|++||+.+.. 
T Consensus       104 He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t  183 (775)
T KOG0319|consen  104 HEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT  183 (775)
T ss_pred             cCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch
Confidence            34445566788888777766542           34458999999999999999765  68999999999999998655 


Q ss_pred             EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------------cceEEEEEecC-----CCEEEEEECCCCE
Q psy10063        443 ELESISGHAKEPINDMQFSKDATMFITASHSQAV-----------------EPINDMQFSKD-----ATMFITASKDHTA  500 (894)
Q Consensus       443 ~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----------------~~V~~l~~spd-----g~~L~sgs~Dg~V  500 (894)
                      ++..+..|.. .|.+++|++|+..++++++|..+                 ..+.++.+-++     |.++++++.+|.+
T Consensus       184 cl~~~~~H~S-~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~  262 (775)
T KOG0319|consen  184 CLHTMILHKS-AVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVV  262 (775)
T ss_pred             HHHHHHhhhh-heeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceE
Confidence            4788889998 99999999999999999999876                 46777888776     6799999999999


Q ss_pred             EEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc----------------------------
Q psy10063        501 KLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV----------------------------  550 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~----------------------------  550 (894)
                      ++||.+.++++.....  ...+..+...+....++....+..+.+++.+.-.                            
T Consensus       263 ~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVA  342 (775)
T KOG0319|consen  263 QYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVA  342 (775)
T ss_pred             EEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEE
Confidence            9999998876644332  1123333333333334444444444444221100                            


Q ss_pred             -ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        551 -GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       551 -~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                       ....+|+|++....+. .+.||...|.+|+...+|.+|++|+.|..+++|+++.+....              ..+...
T Consensus       343 TNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~--------------~~~a~~  407 (775)
T KOG0319|consen  343 TNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKS--------------LCVAQA  407 (775)
T ss_pred             eCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchh--------------hhhhhh
Confidence             0012788887766665 778999999999966678899999999999999994432110              111222


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                      .||...+-.+.+.......+++++  .|..+++|+...........            .+...     ............
T Consensus       408 ~gH~~svgava~~~~~asffvsvS--~D~tlK~W~l~~s~~~~~~~------------~~~~~-----~t~~aHdKdIN~  468 (775)
T KOG0319|consen  408 NGHTNSVGAVAGSKLGASFFVSVS--QDCTLKLWDLPKSKETAFPI------------VLTCR-----YTERAHDKDINC  468 (775)
T ss_pred             cccccccceeeecccCccEEEEec--CCceEEEecCCCcccccccc------------eehhh-----HHHHhhcccccc
Confidence            333333333333333445566666  78999999865411100000            00000     000011112244


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                      +++++..+.++.++.|..       .++|..+       +.....++.||...|+|+.|++..+.||++|.|++|+||.+
T Consensus       469 Vaia~ndkLiAT~SqDkt-------aKiW~le-------~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~i  534 (775)
T KOG0319|consen  469 VAIAPNDKLIATGSQDKT-------AKIWDLE-------QLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSI  534 (775)
T ss_pred             eEecCCCceEEecccccc-------eeeeccc-------CceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEe
Confidence            677777788887776654       5677544       33444578999999999999999999999999999999999


Q ss_pred             cCCceeeccccC---CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC
Q psy10063        790 RKNKATAGFLLS---CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED  866 (894)
Q Consensus       790 ~~~~~~~~~~~~---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D  866 (894)
                      .+..++..+..+   +-.+.|--+|+.|+++++++    -|+||++++++|+..+.+|.+.|++++.++.+.++++||.|
T Consensus       535 s~fSClkT~eGH~~aVlra~F~~~~~qliS~~adG----liKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~D  610 (775)
T KOG0319|consen  535 STFSCLKTFEGHTSAVLRASFIRNGKQLISAGADG----LIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGD  610 (775)
T ss_pred             ccceeeeeecCccceeEeeeeeeCCcEEEeccCCC----cEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCC
Confidence            999998776643   34566999999999999998    59999999999999999999999999999999999999999


Q ss_pred             CcEEEEecC
Q psy10063        867 GFVRLHTFD  875 (894)
Q Consensus       867 g~V~vWdl~  875 (894)
                      |.|.+|.=.
T Consensus       611 g~i~~wkD~  619 (775)
T KOG0319|consen  611 GRIIFWKDV  619 (775)
T ss_pred             eEEEEeecC
Confidence            999999743

>KOG0643|consensus

Probab=100.00  E-value=1e-33  Score=275.84  Aligned_cols=304  Identities=28%  Similarity=0.435  Sum_probs=262.3

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      +.|+||..+++.|.|..+|.+|++++.|..+.||-...|+.+..+.||.+                         .|+|+
T Consensus         4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtG-------------------------avW~~   58 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTG-------------------------AVWCC   58 (327)
T ss_pred             cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCc-------------------------eEEEE
Confidence            35789999999999999999999999999999999999999999999998                         78888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc-
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI-  561 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-  561 (894)
                      +..-+.++|++|+.|..++|||+++|+++..++....|..+.|+++|.++++...+...         ....|.++|++ 
T Consensus        59 Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg---------~~~~v~~fdi~~  129 (327)
T KOG0643|consen   59 DIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMG---------YTCFVSVFDIRD  129 (327)
T ss_pred             EecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcC---------cceEEEEEEccC
Confidence            88889999999999999999999999999999999999999999999988887654421         11126777776 


Q ss_pred             ------ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        562 ------FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       562 ------~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                            ..+++.++..+...+..+.|.|-+++|++|.+||.|.+||++.++++..                         
T Consensus       130 ~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~-------------------------  184 (327)
T KOG0643|consen  130 DSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVD-------------------------  184 (327)
T ss_pred             ChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeee-------------------------
Confidence                  5566888888999999999999999999999999999999987642200                         


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (327)
T KOG0643|consen  185 --------------------------------------------------------------------------------  184 (327)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                             ....|...|..|++++|+.++++++.|...++||..+.+.+
T Consensus       185 ---------------------------------------s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~  225 (327)
T KOG0643|consen  185 ---------------------------------------SDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVL  225 (327)
T ss_pred             ---------------------------------------chhhhccccccccccCCcceEEecccCccceeeeccceeeE
Confidence                                                   01125557889999999999999999999999999999998


Q ss_pred             ecccc--CCCceEeecCCCeEEEEec----------CCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEe
Q psy10063        796 AGFLL--SCPDFLFDFDTTREVTTTS----------TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG  863 (894)
Q Consensus       796 ~~~~~--~~~~~~fS~dg~~l~~as~----------d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~  863 (894)
                      +.+..  .+...+++|--..++++++          .+.|+|+.++|++...+.+.+++||.++|++|+|+|||+..+||
T Consensus       226 Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSG  305 (327)
T KOG0643|consen  226 KTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSG  305 (327)
T ss_pred             EEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccC
Confidence            87764  4456778886665555544          46677888899998889999999999999999999999999999


Q ss_pred             cCCCcEEEEecCccccccccc
Q psy10063        864 GEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       864 s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      |+||.|||..++..++.++|+
T Consensus       306 GEDG~VR~h~Fd~~YF~~~~~  326 (327)
T KOG0643|consen  306 GEDGYVRLHHFDSNYFDFKFE  326 (327)
T ss_pred             CCCceEEEEEeccchhheEec
Confidence            999999999999998887765

>KOG0296|consensus

Probab=100.00  E-value=5.4e-33  Score=281.94  Aligned_cols=333  Identities=14%  Similarity=0.155  Sum_probs=257.2

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      --.+.|.+|.+.|.+|+.+|+..++++|+.|..-.||++.+|+.+..+.+|+.                         .|
T Consensus        55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKD-------------------------SV  109 (399)
T KOG0296|consen   55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKD-------------------------SV  109 (399)
T ss_pred             cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCC-------------------------ce
Confidence            34467899999999999999999999999999999999999999999999998                         78


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      .++.|+.||.+||+|+.+|.|+||+..++.....+.. -..+.-|.|+|.+..|++|+.+|.              +.+|
T Consensus       110 t~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGs--------------vWmw  175 (399)
T KOG0296|consen  110 TCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGS--------------VWMW  175 (399)
T ss_pred             EEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCc--------------EEEE
Confidence            9999999999999999999999999999998888764 578999999999999999999998              7778


Q ss_pred             eccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCC-----ceeeeEECcCCcEEEecCCeE
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGS-----FTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~-----~v~~~~~spdg~~l~~~~g~i  633 (894)
                      .+..+...+.+.||..++.+-.|.|||++++++..||.|++|++.+++.+....     ....+.+.             
T Consensus       176 ~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~-------------  242 (399)
T KOG0296|consen  176 QIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLN-------------  242 (399)
T ss_pred             ECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccc-------------
Confidence            887777888899999999999999999999999999999999999886542110     01111111             


Q ss_pred             EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063        634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN  713 (894)
Q Consensus       634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s  713 (894)
                                ..+..++.|.  .+..+.+..                                                .
T Consensus       243 ----------~~~~~~~~g~--~e~~~~~~~------------------------------------------------~  262 (399)
T KOG0296|consen  243 ----------LAGSTLTKGN--SEGVACGVN------------------------------------------------N  262 (399)
T ss_pred             ----------cccceeEecc--CCccEEEEc------------------------------------------------c
Confidence                      1122222222  111111111                                                0


Q ss_pred             CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceE---EEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063        714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGF---KMPEPPKREKLALALADKVSERYRDR  790 (894)
Q Consensus       714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~---~la~spdg~~Latgs~Dg~I~iwd~~  790 (894)
                      ..|+++.+                          ..+....+..++...+-   .+.++..-.+.|+|+-||+|.|||+.
T Consensus       263 ~sgKVv~~--------------------------~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a  316 (399)
T KOG0296|consen  263 GSGKVVNC--------------------------NNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLA  316 (399)
T ss_pred             ccceEEEe--------------------------cCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecc
Confidence            01111111                          01111112223333333   44455556788999999999999988


Q ss_pred             CCceee--ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCc
Q psy10063        791 KNKATA--GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF  868 (894)
Q Consensus       791 ~~~~~~--~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~  868 (894)
                      ......  .+..++..+.|-. ..+|+++..++    .|++||.++|+++..+.||..+|.+++++|++++|+++|.|+.
T Consensus       317 ~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g----~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~  391 (399)
T KOG0296|consen  317 ASTLRHICEHEDGVTKLKWLN-TDYLLTACANG----KVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNT  391 (399)
T ss_pred             cchhheeccCCCceEEEEEcC-cchheeeccCc----eEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCe
Confidence            766533  4445555666777 68888888887    5999999999999999999999999999999999999999999


Q ss_pred             EEEEecC
Q psy10063        869 VRLHTFD  875 (894)
Q Consensus       869 V~vWdl~  875 (894)
                      .+||++.
T Consensus       392 a~VF~v~  398 (399)
T KOG0296|consen  392 ALVFEVP  398 (399)
T ss_pred             EEEEecC
Confidence            9999875

>KOG0272|consensus

Probab=100.00  E-value=2e-34  Score=297.21  Aligned_cols=265  Identities=21%  Similarity=0.244  Sum_probs=219.1

Q ss_pred             ccceeeeeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccC--CCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        379 SVDRLNSMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNL--DQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      .......||.|++.|+.++-           -.....|.||.+.|.++.|+|.  +..||+|+.||.|+||++....+++
T Consensus       176 rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~  255 (459)
T KOG0272|consen  176 RPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQ  255 (459)
T ss_pred             CcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchh
Confidence            34456688999999987643           1344589999999999999997  5699999999999999999999999


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEE
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAA  524 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~  524 (894)
                      .|.+|..                         .|..++|+|+|++|++++.|.+-++||+++++.+...++ ...|.+++
T Consensus       256 ~l~gH~~-------------------------RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~ia  310 (459)
T KOG0272|consen  256 DLEGHLA-------------------------RVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIA  310 (459)
T ss_pred             hhhcchh-------------------------hheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeE
Confidence            9999988                         788888999999999999999999999999987776665 58899999


Q ss_pred             EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |.+||..+++|+.|..              -||||+++|+++..|.||...|.+|+|+|+|..|++|+.|++++|||++.
T Consensus       311 f~~DGSL~~tGGlD~~--------------~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~  376 (459)
T KOG0272|consen  311 FQPDGSLAATGGLDSL--------------GRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM  376 (459)
T ss_pred             ecCCCceeeccCccch--------------hheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc
Confidence            9999999999999886              79999999999999999999999999999999999999999999999987


Q ss_pred             Ccccc----CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCC
Q psy10063        605 GLDIS----EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHS  680 (894)
Q Consensus       605 ~~~~~----~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~  680 (894)
                      ...+.    +...|..+.|+|                      ..+..+++++  .|..+++|...              
T Consensus       377 r~~ly~ipAH~nlVS~Vk~~p----------------------~~g~fL~Tas--yD~t~kiWs~~--------------  418 (459)
T KOG0272|consen  377 RSELYTIPAHSNLVSQVKYSP----------------------QEGYFLVTAS--YDNTVKIWSTR--------------  418 (459)
T ss_pred             cccceecccccchhhheEecc----------------------cCCeEEEEcc--cCcceeeecCC--------------
Confidence            65431    223333333433                      2233344444  45555555411              


Q ss_pred             CCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCC
Q psy10063        681 GTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPV  760 (894)
Q Consensus       681 g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~  760 (894)
                                                                                          ....++.+.||.
T Consensus       419 --------------------------------------------------------------------~~~~~ksLaGHe  430 (459)
T KOG0272|consen  419 --------------------------------------------------------------------TWSPLKSLAGHE  430 (459)
T ss_pred             --------------------------------------------------------------------CcccchhhcCCc
Confidence                                                                                223445688999


Q ss_pred             CceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063        761 DIGFKMPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       761 ~~v~~la~spdg~~Latgs~Dg~I~iwd  788 (894)
                      +.|.++++++++++|++++.|.+|++|.
T Consensus       431 ~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  431 GKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             cceEEEEeccCCceEEEeccCceeeecc
Confidence            9999999999999999999999999995

>KOG0315|consensus

Probab=100.00  E-value=1.2e-32  Score=265.78  Aligned_cols=267  Identities=19%  Similarity=0.217  Sum_probs=226.6

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC-------------------CccceEEE
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ-------------------AVEPINDM  482 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~-------------------~i~~V~~l  482 (894)
                      -+|+++++|.+||+|...+|+|.+.++-..+ .|..+.+.||+++||.++...                   +-+.|.++
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~ds-qVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaV   89 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQHPDS-QVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAV   89 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEecCcc-ceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEE
Confidence            4899999999999999999999999985555 999999999999999887532                   22689999


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      .|..||+++++|++||.+||||++...+.+.+++..+|.++.++|....|+++...|.              |++||+..
T Consensus        90 gF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~--------------irvWDl~~  155 (311)
T KOG0315|consen   90 GFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGN--------------IRVWDLGE  155 (311)
T ss_pred             EEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCc--------------EEEEEccC
Confidence            9999999999999999999999999999999999999999999999999999999997              89999988


Q ss_pred             cceEEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063        563 EEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST  641 (894)
Q Consensus       563 ~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~  641 (894)
                      ..+.+.+. .....|.++...+||.+|+.+...|..++|++-..+...+                               
T Consensus       156 ~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~-------------------------------  204 (311)
T KOG0315|consen  156 NSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASE-------------------------------  204 (311)
T ss_pred             CccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcccc-------------------------------
Confidence            87766653 4456899999999999999999999999999854211000                               


Q ss_pred             CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063        642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV  721 (894)
Q Consensus       642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v  721 (894)
                                          |                                                           
T Consensus       205 --------------------l-----------------------------------------------------------  205 (311)
T KOG0315|consen  205 --------------------L-----------------------------------------------------------  205 (311)
T ss_pred             --------------------c-----------------------------------------------------------
Confidence                                0                                                           


Q ss_pred             cccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccC
Q psy10063        722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLS  801 (894)
Q Consensus       722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~  801 (894)
                                                   ..+..++.|...+..+.+|||+++||+++.|++++||+.+..         
T Consensus       206 -----------------------------~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~---------  247 (311)
T KOG0315|consen  206 -----------------------------EPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF---------  247 (311)
T ss_pred             -----------------------------eEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc---------
Confidence                                         001124568888999999999999999999999888875532         


Q ss_pred             CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccc
Q psy10063        802 CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDY  881 (894)
Q Consensus       802 ~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~  881 (894)
                                                       -++-..+++|.+.|++++||.||+||++|+.|+.+|+|+++.++.+.
T Consensus       248 ---------------------------------~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~  294 (311)
T KOG0315|consen  248 ---------------------------------FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVR  294 (311)
T ss_pred             ---------------------------------eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceee
Confidence                                             02234688999999999999999999999999999999999988766


Q ss_pred             ccc
Q psy10063        882 TFD  884 (894)
Q Consensus       882 ~~~  884 (894)
                      .+.
T Consensus       295 qy~  297 (311)
T KOG0315|consen  295 QYQ  297 (311)
T ss_pred             ecC
Confidence            654

>KOG0282|consensus

Probab=100.00  E-value=1.1e-33  Score=296.45  Aligned_cols=287  Identities=18%  Similarity=0.288  Sum_probs=245.3

Q ss_pred             eEEEEEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCC-CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        400 VVKMQVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRM-GRELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~t-g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      .+.+.+.||...|.++.|.| .+.+|++|+.|+.|+||++.. +++++.|.+|..                         
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k-------------------------  259 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRK-------------------------  259 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchh-------------------------
Confidence            45568899999999999999 889999999999999999976 899999999998                         


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +|.+++|+.+|..|++++.|+.|++||.++|+++..|..+..+.|+.|.||+ ..+++|+.++.              |+
T Consensus       260 ~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~k--------------i~  325 (503)
T KOG0282|consen  260 PVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKK--------------IR  325 (503)
T ss_pred             hhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCc--------------EE
Confidence            7888999999999999999999999999999999999999999999999999 66677777775              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      .||++.++.++.+..|-+.|..+.|-++|+++++.++|+.|+||+.+....+..                          
T Consensus       326 ~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~--------------------------  379 (503)
T KOG0282|consen  326 QWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKN--------------------------  379 (503)
T ss_pred             EEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchh--------------------------
Confidence            999999999999999999999999999999999999999999999865432110                          


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       380 --------------------------------------------------------------------------------  379 (503)
T KOG0282|consen  380 --------------------------------------------------------------------------------  379 (503)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA--  794 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~--  794 (894)
                                                            +...+.....||..+|.+.+++.-+.|..|.+|.+.....  
T Consensus       380 --------------------------------------i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~n  421 (503)
T KOG0282|consen  380 --------------------------------------IADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLN  421 (503)
T ss_pred             --------------------------------------hcchhhccCcceecCCCCCeehhhccCceEEEEecccccccC
Confidence                                                  0000111234677889999999999999999998544322  


Q ss_pred             ----eeccccCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC-cEEEEecCCC
Q psy10063        795 ----TAGFLLSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDG  867 (894)
Q Consensus       795 ----~~~~~~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg-~~LaS~s~Dg  867 (894)
                          ..++.....  .+.|||||++|+++.+++    .|.+||.++-+++..+++|.+.|..+.|+|.. ..||+||.||
T Consensus       422 kkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG----~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G  497 (503)
T KOG0282|consen  422 KKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDG----KVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDG  497 (503)
T ss_pred             HhhhhcceeccCceeeEEEcCCCCeEEeecCCc----cEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCc
Confidence                233332222  456999999999998887    59999999999999999999999999999976 5799999999


Q ss_pred             cEEEEe
Q psy10063        868 FVRLHT  873 (894)
Q Consensus       868 ~V~vWd  873 (894)
                      .|+||+
T Consensus       498 ~Ikiwd  503 (503)
T KOG0282|consen  498 LIKIWD  503 (503)
T ss_pred             eeEecC
Confidence            999996

>KOG0645|consensus

Probab=100.00  E-value=3.2e-31  Score=259.27  Aligned_cols=291  Identities=15%  Similarity=0.174  Sum_probs=224.9

Q ss_pred             eEEEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCCC---eEEEEec-CCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRMG---RELESIS-GHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~tg---~~~~~l~-~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      .....+.+|.++|..++|+|- |.+||+|+.|+.||||+...+   .+...+. +|+.                      
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkr----------------------   62 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKR----------------------   62 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchh----------------------
Confidence            345578899999999999997 889999999999999998853   3444443 4555                      


Q ss_pred             CccceEEEEEecCCCEEEEEECCCCEEEEEcCC--CcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        475 AVEPINDMQFSKDATMFITASKDHTAKLFTTHD--RQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       475 ~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~--~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                         .|++++|+|.|++|+++|.|.++.||.-..  .+++..+++ +..|.|++|+++|.+|++++.++.+.+|..+..  
T Consensus        63 ---sVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ded--  137 (312)
T KOG0645|consen   63 ---SVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDED--  137 (312)
T ss_pred             ---eeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCC--
Confidence               799999999999999999999999997664  467777875 589999999999999999999998444433311  


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                               ...+++..|..|...|..+.|+|-..+|++++.|.+|++|+-..+.                 .+      
T Consensus       138 ---------dEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dd-----------------dW------  185 (312)
T KOG0645|consen  138 ---------DEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDD-----------------DW------  185 (312)
T ss_pred             ---------CcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCC-----------------Ce------
Confidence                     1235677889999999999999999999999999999999753210                 00      


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (312)
T KOG0645|consen  186 --------------------------------------------------------------------------------  185 (312)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                             .+...+.+|..-|++++|.+.|..|++++.|+.|+||....
T Consensus       186 ---------------------------------------~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~  226 (312)
T KOG0645|consen  186 ---------------------------------------ECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT  226 (312)
T ss_pred             ---------------------------------------eEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc
Confidence                                                   01124567788899999999999999999999999998652


Q ss_pred             CceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc------cee-eeccCCCCCeeEEEEeeC-CcEEEEe
Q psy10063        792 NKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE------EEF-ARIKGHFGPINSLAFHPD-GKSYASG  863 (894)
Q Consensus       792 ~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg------~~l-~~l~gH~~~V~~l~fSpd-g~~LaS~  863 (894)
                      .- ...+......+.|.  ...|+++++|.    .|+||....+      +++ ..-..|...|++|+|.|. ..+|++|
T Consensus       227 ~~-~~~~sr~~Y~v~W~--~~~IaS~ggD~----~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~  299 (312)
T KOG0645|consen  227 DL-SGMHSRALYDVPWD--NGVIASGGGDD----AIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASG  299 (312)
T ss_pred             Cc-chhcccceEeeeec--ccceEeccCCC----EEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeec
Confidence            11 11111223334444  45677777776    5899876643      222 234579999999999995 6789999


Q ss_pred             cCCCcEEEEecC
Q psy10063        864 GEDGFVRLHTFD  875 (894)
Q Consensus       864 s~Dg~V~vWdl~  875 (894)
                      |.||.|++|.++
T Consensus       300 ~DDG~v~~W~l~  311 (312)
T KOG0645|consen  300 GDDGIVNFWELE  311 (312)
T ss_pred             CCCceEEEEEec
Confidence            999999999985

>KOG0295|consensus

Probab=100.00  E-value=1.3e-32  Score=278.97  Aligned_cols=299  Identities=16%  Similarity=0.167  Sum_probs=250.9

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      +.++..+.+|...|..+.|+|+--+++++++|++|++||..+|++...++||.+                         .
T Consensus        98 p~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~-------------------------s  152 (406)
T KOG0295|consen   98 PNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTD-------------------------S  152 (406)
T ss_pred             CCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhcccc-------------------------c
Confidence            456667889999999999999999999999999999999999999999999998                         6


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCC-CcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHD-RQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      |.+|+|+..|++|++|+.|-.+++||... .++++.+. |+..|.+++|-|.|.+|++++.|..              |+
T Consensus       153 v~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~t--------------ik  218 (406)
T KOG0295|consen  153 VFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNT--------------IK  218 (406)
T ss_pred             eeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccc--------------ee
Confidence            78888888899999999999999999986 55665554 5678999999999999999999997              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEecCCe
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                      .|++.+|.++..|.+|..+|..++...||.+|++++.|.+|++|-+..++...    +...+..++|.|...+-      
T Consensus       219 ~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~------  292 (406)
T KOG0295|consen  219 AWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYP------  292 (406)
T ss_pred             EEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCc------
Confidence            99999999999999999999999999999999999999999999988774221    11122222222211000      


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                                                                                                      
T Consensus       293 --------------------------------------------------------------------------------  292 (406)
T KOG0295|consen  293 --------------------------------------------------------------------------------  292 (406)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN  792 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~  792 (894)
                                           .          ++.         .+...        -.+++|++++.|++|++||+..+
T Consensus       293 ---------------------~----------i~~---------at~~~--------~~~~~l~s~SrDktIk~wdv~tg  324 (406)
T KOG0295|consen  293 ---------------------S----------ISE---------ATGST--------NGGQVLGSGSRDKTIKIWDVSTG  324 (406)
T ss_pred             ---------------------c----------hhh---------ccCCC--------CCccEEEeecccceEEEEeccCC
Confidence                                 0          000         00000        03679999999999999999999


Q ss_pred             ceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        793 KATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       793 ~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      .++..   +...+..++|+|.|++|+++..|+    .|+|||++.++++..+..|..-|.++.|..+..|+++|+.|..+
T Consensus       325 ~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk----tlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~  400 (406)
T KOG0295|consen  325 MCLFTLVGHDNWVRGVAFSPGGKYILSCADDK----TLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTV  400 (406)
T ss_pred             eEEEEEecccceeeeeEEcCCCeEEEEEecCC----cEEEEEeccceeeeccCCCcceeEEEecCCCCceEEecccccee
Confidence            98654   445677889999999999999999    69999999999999999999999999999999999999999999


Q ss_pred             EEEec
Q psy10063        870 RLHTF  874 (894)
Q Consensus       870 ~vWdl  874 (894)
                      ++|.-
T Consensus       401 KvwEc  405 (406)
T KOG0295|consen  401 KVWEC  405 (406)
T ss_pred             eeeec
Confidence            99974

>KOG0293|consensus

Probab=100.00  E-value=3.3e-32  Score=279.20  Aligned_cols=283  Identities=16%  Similarity=0.209  Sum_probs=232.0

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC---eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG---RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg---~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .+.+|..+|+-+.||++|+|||+++.|.+..||++...   +..+++.+|..                         +|.
T Consensus       219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~-------------------------~V~  273 (519)
T KOG0293|consen  219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQ-------------------------PVS  273 (519)
T ss_pred             hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccC-------------------------ceE
Confidence            67899999999999999999999999999999998654   44778889988                         788


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE--RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      .|.||||.++|++|+.|..+++||+.+|.+++.+.+.  ..+.+++|.|||.++++|+.|+.+.+|..+...        
T Consensus       274 yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~--------  345 (519)
T KOG0293|consen  274 YIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI--------  345 (519)
T ss_pred             EEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch--------
Confidence            8888999999999999999999999999999988864  789999999999999999999986555554332        


Q ss_pred             eccccceEEEccC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        559 HLIFEEEFARIKG-HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       559 d~~~~~~~~~l~~-h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                             +...++ ....|++++..+||++++....|..|++|+.+......                            
T Consensus       346 -------~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~----------------------------  390 (519)
T KOG0293|consen  346 -------LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRG----------------------------  390 (519)
T ss_pred             -------hhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhc----------------------------
Confidence                   222223 22568999999999999999999999999875432100                            


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                                                                                      
T Consensus       391 --------------------------------------------------------------------------------  390 (519)
T KOG0293|consen  391 --------------------------------------------------------------------------------  390 (519)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                                            +-.....|.++++|.|++++++.-.+..|++||++..+.+..
T Consensus       391 --------------------------------------lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~k  432 (519)
T KOG0293|consen  391 --------------------------------------LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRK  432 (519)
T ss_pred             --------------------------------------cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHH
Confidence                                                  001234578889999999999999999999999997777665


Q ss_pred             cccC---CC--ceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC-cEEEEecCCCcEE
Q psy10063        798 FLLS---CP--DFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFVR  870 (894)
Q Consensus       798 ~~~~---~~--~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg-~~LaS~s~Dg~V~  870 (894)
                      +...   +.  .-||.. +..++++++.|+    .|+||+..+|+++..|.||...|.||+|.|.. .+||++|+||+||
T Consensus       433 Y~Ghkq~~fiIrSCFgg~~~~fiaSGSED~----kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIR  508 (519)
T KOG0293|consen  433 YFGHKQGHFIIRSCFGGGNDKFIASGSEDS----KVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIR  508 (519)
T ss_pred             hhcccccceEEEeccCCCCcceEEecCCCc----eEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence            5432   22  234544 446788888887    69999999999999999999999999999966 6899999999999


Q ss_pred             EEecCc
Q psy10063        871 LHTFDQ  876 (894)
Q Consensus       871 vWdl~~  876 (894)
                      ||....
T Consensus       509 IWg~~~  514 (519)
T KOG0293|consen  509 IWGPSD  514 (519)
T ss_pred             EecCCc
Confidence            998864

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.3e-30  Score=278.57  Aligned_cols=282  Identities=25%  Similarity=0.370  Sum_probs=241.7

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.+|.+.|.+++|+|++++|++++.||.|+||++..++.+..+..|..                         .+.++.
T Consensus         4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~-------------------------~i~~~~   58 (289)
T cd00200           4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTG-------------------------PVRDVA   58 (289)
T ss_pred             HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCc-------------------------ceeEEE
Confidence            4668999999999999999999999999999999999888888888876                         677888


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      |++++++|++++.||.|++||+..++.+..+.. ...+.+++|++++++|++++.++.              |++||+..
T Consensus        59 ~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------i~~~~~~~  124 (289)
T cd00200          59 ASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKT--------------IKVWDVET  124 (289)
T ss_pred             ECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCe--------------EEEEECCC
Confidence            888889999999999999999999888777775 468999999999888887776775              88999998


Q ss_pred             cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       563 ~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      ++.+..+..|...|.+++|++++.+|++++.||.|++||++.++.+                                  
T Consensus       125 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~----------------------------------  170 (289)
T cd00200         125 GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCV----------------------------------  170 (289)
T ss_pred             cEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccc----------------------------------
Confidence            8888888899999999999999999998888999999998532210                                  


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (289)
T cd00200         171 --------------------------------------------------------------------------------  170 (289)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc---c
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF---L  799 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---~  799 (894)
                                                     ..+..|...+.+++|+|++++|++++.|+.|++||+..++.+..+   .
T Consensus       171 -------------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~  219 (289)
T cd00200         171 -------------------------------ATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE  219 (289)
T ss_pred             -------------------------------eeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcC
Confidence                                           011134456788999999999999999999999999887765544   2


Q ss_pred             cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        800 LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       800 ~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      ..+..++|++++..++++..++    .|++|++..++.+..+.+|...|.+++|++++++|++++.||.|+||+
T Consensus       220 ~~i~~~~~~~~~~~~~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         220 NGVNSVAFSPDGYLLASGSEDG----TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             CceEEEEEcCCCcEEEEEcCCC----cEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            3456778999977777766455    599999999999999999999999999999999999999999999996

>KOG0265|consensus

Probab=100.00  E-value=2.7e-31  Score=263.31  Aligned_cols=286  Identities=15%  Similarity=0.196  Sum_probs=243.0

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC-CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR-MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~-tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ..+.+.+|.+.|..+.|+|+|.+||+|+.|..|.||++. ..+-...+++|++                         .|
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsg-------------------------AV   93 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSG-------------------------AV   93 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccc-------------------------ee
Confidence            445788999999999999999999999999999999965 3344778889998                         89


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      ..+.|.+|+..|++++.|++|+.||+++|++++.++.+ .-|.++.-+.-|..|+..+.++.             .+++|
T Consensus        94 M~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~-------------t~kl~  160 (338)
T KOG0265|consen   94 MELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDG-------------TLKLW  160 (338)
T ss_pred             EeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCc-------------eEEEE
Confidence            99999999999999999999999999999999999875 56777776767777766665554             29999


Q ss_pred             eccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                      |++...+++.+. ....+.++.|..++..+++|+-|+.|++||++...                                
T Consensus       161 D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d--------------------------------  207 (338)
T KOG0265|consen  161 DIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKND--------------------------------  207 (338)
T ss_pred             eecccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCc--------------------------------
Confidence            999988887764 45679999999999999999999999999986432                                


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                                                                                                      
T Consensus       208 --------------------------------------------------------------------------------  207 (338)
T KOG0265|consen  208 --------------------------------------------------------------------------------  207 (338)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce----
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA----  794 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~----  794 (894)
                                                       ...++.||.+.|..|..+++|.+|.+-+.|.++++||++....    
T Consensus       208 ---------------------------------~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~  254 (338)
T KOG0265|consen  208 ---------------------------------GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRC  254 (338)
T ss_pred             ---------------------------------ceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCce
Confidence                                             1125678999999999999999999999999999999876433    


Q ss_pred             eeccccCC-------CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063        795 TAGFLLSC-------PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  867 (894)
Q Consensus       795 ~~~~~~~~-------~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg  867 (894)
                      +..+....       -..+|||++.++.+++.|+    .|++||......+..|.||.+.|.+++|+|...+|.+++.|+
T Consensus       255 v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr----~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk  330 (338)
T KOG0265|consen  255 VKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADR----FVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDK  330 (338)
T ss_pred             EEEeecchhhhhhhcceeeccCCCCccccccccc----eEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCc
Confidence            22222221       2456999999999999998    599999999999999999999999999999999999999999


Q ss_pred             cEEEEec
Q psy10063        868 FVRLHTF  874 (894)
Q Consensus       868 ~V~vWdl  874 (894)
                      .|++=.+
T Consensus       331 ~i~lgei  337 (338)
T KOG0265|consen  331 TIYLGEI  337 (338)
T ss_pred             eeEeecc
Confidence            9987443

>KOG0263|consensus

Probab=100.00  E-value=6e-32  Score=299.70  Aligned_cols=275  Identities=20%  Similarity=0.322  Sum_probs=222.2

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC--------CCeeEEEEcCCCCEEEEEeC
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK--------EPINDMQFSKDATMFITASH  472 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~--------~~V~~v~~spdg~~la~~~~  472 (894)
                      ..+.+.--...|.|+.|++|+.+||.|-.|..|+||.+...+ ++.++....        ..|. +....+..-..+-..
T Consensus       370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~k-l~~lk~~~~l~~~d~~sad~~-~~~~D~~~~~~~~~L  447 (707)
T KOG0263|consen  370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKK-LKKLKDASDLSNIDTESADVD-VDMLDDDSSGTSRTL  447 (707)
T ss_pred             EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhh-hccccchhhhccccccccchh-hhhccccCCceeEEe
Confidence            333555566889999999999999999999999999987432 222221110        0111 111111111111112


Q ss_pred             CCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        473 SQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       473 d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      -|+-++|+.+.|+|+.++|++||+|++||+|.+.+..++..++++ .+|+++.|+|.|-|+++++.|+.           
T Consensus       448 ~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~t-----------  516 (707)
T KOG0263|consen  448 YGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQT-----------  516 (707)
T ss_pred             ecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCce-----------
Confidence            233359999999999999999999999999999999999999865 89999999999999999999997           


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                         .++|....-++++.+.||.+.|.|++|+|+..|+++||.|.+||+||+..+..                        
T Consensus       517 ---ArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~------------------------  569 (707)
T KOG0263|consen  517 ---ARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS------------------------  569 (707)
T ss_pred             ---eeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE------------------------
Confidence               78888888889999999999999999999999999999999999999865421                        


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                                                                                      
T Consensus       570 --------------------------------------------------------------------------------  569 (707)
T KOG0263|consen  570 --------------------------------------------------------------------------------  569 (707)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                               ++++.||.+.|.+|+|||+|++||+|+.|+.|       
T Consensus       570 -----------------------------------------VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I-------  601 (707)
T KOG0263|consen  570 -----------------------------------------VRIFTGHKGPVTALAFSPCGRYLASGDEDGLI-------  601 (707)
T ss_pred             -----------------------------------------EEEecCCCCceEEEEEcCCCceEeecccCCcE-------
Confidence                                                     12456799999999999999999999999965       


Q ss_pred             CceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        792 NKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       792 ~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                                                          .|||+..|+++..+++|.+.|.+|.||.||..||+||.|..|+|
T Consensus       602 ------------------------------------~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~l  645 (707)
T KOG0263|consen  602 ------------------------------------KIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRL  645 (707)
T ss_pred             ------------------------------------EEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEE
Confidence                                                55556667888889999999999999999999999999999999


Q ss_pred             EecCcccc
Q psy10063        872 HTFDQAYF  879 (894)
Q Consensus       872 Wdl~~~~~  879 (894)
                      ||+..-..
T Consensus       646 WD~~~~~~  653 (707)
T KOG0263|consen  646 WDLTKVIE  653 (707)
T ss_pred             EEchhhcc
Confidence            99875443

>KOG0285|consensus

Probab=100.00  E-value=2.3e-31  Score=268.60  Aligned_cols=288  Identities=17%  Similarity=0.272  Sum_probs=242.2

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      +...+.||-+.|+||++.|-.+++++|+.|++|+|||+.+|++...+.||..                         .|.
T Consensus       143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~-------------------------~vr  197 (460)
T KOG0285|consen  143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIE-------------------------TVR  197 (460)
T ss_pred             ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhh-------------------------eee
Confidence            3446889999999999999999999999999999999999999999999988                         688


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      .+++|+.-.||++++.|+.|+.||++..+.++.+.++ ..|+|++++|.-+.|++++.|..              +|+||
T Consensus       198 ~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst--------------~RvWD  263 (460)
T KOG0285|consen  198 GVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDST--------------IRVWD  263 (460)
T ss_pred             eeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcce--------------EEEee
Confidence            8888888889999999999999999999999887754 89999999999999999999987              99999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      +++...+..|.||...|.++.+.+-...+++|+.|++|++||+..++.+                               
T Consensus       264 iRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~-------------------------------  312 (460)
T KOG0285|consen  264 IRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTM-------------------------------  312 (460)
T ss_pred             ecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCcee-------------------------------
Confidence            9999999999999999999999987788999999999999999765311                               


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                                                                                      
T Consensus       313 --------------------------------------------------------------------------------  312 (460)
T KOG0285|consen  313 --------------------------------------------------------------------------------  312 (460)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL  799 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~  799 (894)
                                                        ..+..|...|.+++.+|+...||+++.|. |+-|++..+..+.. .
T Consensus       313 ----------------------------------~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~n-l  356 (460)
T KOG0285|consen  313 ----------------------------------ITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQN-L  356 (460)
T ss_pred             ----------------------------------EeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhc-c
Confidence                                              12234666788999999999999999988 99999999888776 4


Q ss_pred             cCCCceE--eecCCCeEEEEecCCCCceeEEEeecCCcceeeecc-----C---CCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        800 LSCPDFL--FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK-----G---HFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       800 ~~~~~~~--fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~-----g---H~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      .++..+.  ++.....+++.++|..   .|.+||.++|-....+.     |   ....|.+.+|...|..|++|..|+.|
T Consensus       357 sgh~~iintl~~nsD~v~~~G~dng---~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtI  433 (460)
T KOG0285|consen  357 SGHNAIINTLSVNSDGVLVSGGDNG---SIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTI  433 (460)
T ss_pred             ccccceeeeeeeccCceEEEcCCce---EEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcce
Confidence            4444443  4444444444444443   59999999986554432     1   23568999999999999999999999


Q ss_pred             EEEecCcc
Q psy10063        870 RLHTFDQA  877 (894)
Q Consensus       870 ~vWdl~~~  877 (894)
                      ++|.-++.
T Consensus       434 k~~keDe~  441 (460)
T KOG0285|consen  434 KMYKEDEH  441 (460)
T ss_pred             EEEecccc
Confidence            99986543

>KOG0266|consensus

Probab=100.00  E-value=9.5e-31  Score=299.26  Aligned_cols=289  Identities=23%  Similarity=0.333  Sum_probs=248.0

Q ss_pred             EEEEecC-CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        402 KMQVTDQ-SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       402 ~~~l~~H-~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ...+.+| ...|.++.|+++|++|++++.|+.|++|++..++  .++.+.+|..                         .
T Consensus       151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~-------------------------~  205 (456)
T KOG0266|consen  151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTR-------------------------G  205 (456)
T ss_pred             eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhcccccccc-------------------------c
Confidence            3344444 8999999999999999999999999999998777  7777778877                         7


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEc-CCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTT-HDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl-~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      |.+++|+|||++|++++.|++|+|||+ ..+.+++.+.+ ...|.+++|+|+|++|++|+.|+.              |+
T Consensus       206 v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~t--------------vr  271 (456)
T KOG0266|consen  206 VSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGT--------------VR  271 (456)
T ss_pred             eeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCc--------------EE
Confidence            889999999999999999999999999 55688888874 689999999999999999999997              99


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +||++.++++..|.+|.+.|.+++|+++|.+|++++.||.|+|||+..+...                          .+
T Consensus       272 iWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~--------------------------~~  325 (456)
T KOG0266|consen  272 IWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKL--------------------------CL  325 (456)
T ss_pred             EEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCcee--------------------------ee
Confidence            9999999999999999999999999999999999999999999999765310                          00


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       326 --------------------------------------------------------------------------------  325 (456)
T KOG0266|consen  326 --------------------------------------------------------------------------------  325 (456)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC--ceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD--IGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~--~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                           ..+.++..  .+.+++|+|++++|+++..|+.+++|++..++.
T Consensus       326 -------------------------------------~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~  368 (456)
T KOG0266|consen  326 -------------------------------------KLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKS  368 (456)
T ss_pred             -------------------------------------ecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcc
Confidence                                                 00011111  478999999999999999999999999998877


Q ss_pred             eeccccCCC------ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCC-CCCeeEEEEeeCCcEEEEec--C
Q psy10063        795 TAGFLLSCP------DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-FGPINSLAFHPDGKSYASGG--E  865 (894)
Q Consensus       795 ~~~~~~~~~------~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH-~~~V~~l~fSpdg~~LaS~s--~  865 (894)
                      +..+.....      +..+++.+.++++++.+.    .|++|++.++..+..+.+| ...|..+.|++...++++++  .
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~----~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~  444 (456)
T KOG0266|consen  369 VGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDG----SVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEG  444 (456)
T ss_pred             eeeecccCCcceeEecccccCCCCeEEEEeCCc----eEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCC
Confidence            554443322      333577899999999998    5999999999999999999 89999999999999999998  7


Q ss_pred             CCcEEEEecCc
Q psy10063        866 DGFVRLHTFDQ  876 (894)
Q Consensus       866 Dg~V~vWdl~~  876 (894)
                      |+.|++|..+.
T Consensus       445 d~~~~~w~~~~  455 (456)
T KOG0266|consen  445 DGLIRLWKYDF  455 (456)
T ss_pred             CceEEEecCCC
Confidence            99999998753

>KOG1408|consensus

Probab=100.00  E-value=2.6e-30  Score=280.17  Aligned_cols=415  Identities=14%  Similarity=0.120  Sum_probs=274.8

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEec--CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGH--AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs--~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----  476 (894)
                      .+..|...++||+||++|+||++|-  .-..++||++.....+.+|..|+. .|.|++|+|.++||++.+.....     
T Consensus        73 lvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY-~vtcvaFsp~~kyvvSVGsQHDMIVnv~  151 (1080)
T KOG1408|consen   73 LVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKY-NVTCVAFSPGNKYVVSVGSQHDMIVNVN  151 (1080)
T ss_pred             eecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccc-cceeeeecCCCcEEEeeccccceEEEhh
Confidence            4556788999999999999999985  556799999999889999999998 99999999999999966643221     


Q ss_pred             --------------------------------------------------------------------------------
Q psy10063        477 --------------------------------------------------------------------------------  476 (894)
Q Consensus       477 --------------------------------------------------------------------------------  476 (894)
                                                                                                      
T Consensus       152 dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicA  231 (1080)
T KOG1408|consen  152 DWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICA  231 (1080)
T ss_pred             hhhhcccccccccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccc
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q psy10063        477 --------------------------------------------------------------------------------  476 (894)
Q Consensus       477 --------------------------------------------------------------------------------  476 (894)
                                                                                                      
T Consensus       232 estfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q  311 (1080)
T KOG1408|consen  232 ESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQ  311 (1080)
T ss_pred             cceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhhhccccccccccccchhhccc
Confidence                                                                                            


Q ss_pred             -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC----CcEEEEEeCCCCeeEEEEcCC-----------
Q psy10063        477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHD----RQLLKTYTTERPVNSAALSPI-----------  528 (894)
Q Consensus       477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~----~~~~~~~~~~~~v~~l~~spd-----------  528 (894)
                                   -....+.|++...+|.+...|..|+|||+++    |++...+.|...|+.+.--|-           
T Consensus       312 ~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp  391 (1080)
T KOG1408|consen  312 PEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLP  391 (1080)
T ss_pred             ccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCC
Confidence                         1334667888778888888999999999986    455555667666766654441           


Q ss_pred             CCEEEEEECCCCeEEEeccCccceeeEEEEecccc------------------------ceEEEccCCCCCeEEEEEecC
Q psy10063        529 LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE------------------------EEFARIKGHFGPINSLAFHPD  584 (894)
Q Consensus       529 g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~------------------------~~~~~l~~h~~~V~~l~~spd  584 (894)
                      ...+++++.|+.|++|.++..... ++.--++-+.                        +.....-+..-.|.+|+.+|+
T Consensus       392 ~~cF~TCSsD~TIRlW~l~~ctnn-~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~  470 (1080)
T KOG1408|consen  392 RGCFTTCSSDGTIRLWDLAFCTNN-QVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPD  470 (1080)
T ss_pred             ccceeEecCCCcEEEeeccccccc-ceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCC
Confidence            235888999999887777652110 0100000000                        001111123457899999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEec
Q psy10063        585 GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTK  664 (894)
Q Consensus       585 g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~  664 (894)
                      |++|++|...|.|+||++...+.+..               +..++..+..+.   ++.++-..-+.++.++++.|.+++
T Consensus       471 gqhLAsGDr~GnlrVy~Lq~l~~~~~---------------~eAHesEilcLe---yS~p~~~~kLLASasrdRlIHV~D  532 (1080)
T KOG1408|consen  471 GQHLASGDRGGNLRVYDLQELEYTCF---------------MEAHESEILCLE---YSFPVLTNKLLASASRDRLIHVYD  532 (1080)
T ss_pred             cceecccCccCceEEEEehhhhhhhh---------------eecccceeEEEe---ecCchhhhHhhhhccCCceEEEEe
Confidence            99999999999999999976553311               112222333332   222332222333333677777766


Q ss_pred             hhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC--CEEEecccCccccccCCcceeecccc
Q psy10063        665 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG--TRLHVNPFDEQQSVDASPLMTWGHIE  742 (894)
Q Consensus       665 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g--~~l~v~~~~~~~~~~~~~l~~~~~~~  742 (894)
                      .........                        ..++ .......+.|...|  ..+.....|...+.+.  ..  ...+
T Consensus       533 v~rny~l~q------------------------tld~-HSssITsvKFa~~gln~~MiscGADksimFr~--~q--k~~~  583 (1080)
T KOG1408|consen  533 VKRNYDLVQ------------------------TLDG-HSSSITSVKFACNGLNRKMISCGADKSIMFRV--NQ--KASS  583 (1080)
T ss_pred             cccccchhh------------------------hhcc-cccceeEEEEeecCCceEEEeccCchhhheeh--hc--cccC
Confidence            443222110                        0000 01111122222222  1111111111111000  00  0001


Q ss_pred             CcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCC------ceEeecCCCeEEE
Q psy10063        743 GTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP------DFLFDFDTTREVT  816 (894)
Q Consensus       743 g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~------~~~fS~dg~~l~~  816 (894)
                      |.+|...     ........++.|++.|..+++++++.|+.|+||++..+++.+.+...+.      .+.+.|.|-++++
T Consensus       584 g~~f~r~-----t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~at  658 (1080)
T KOG1408|consen  584 GRLFPRH-----TQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLAT  658 (1080)
T ss_pred             ceecccc-----ccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEE
Confidence            1111100     0111235688999999999999999999999999999999887775443      3568889999999


Q ss_pred             EecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        817 TTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       817 as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      ...|+    .|.+||+.+|++++.+.||...|+.|.|.+|-++|++.+.||+|.||.+..
T Consensus       659 Scsdk----tl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  659 SCSDK----TLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             eecCC----ceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence            99998    699999999999999999999999999999999999999999999999875

>KOG0273|consensus

Probab=100.00  E-value=5e-31  Score=275.27  Aligned_cols=302  Identities=13%  Similarity=0.195  Sum_probs=243.3

Q ss_pred             ecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCC--CeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCC-Cccce
Q psy10063        406 TDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRM--GREL--ESISGHAKEPINDMQFSKDATMFITASHSQ-AVEPI  479 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~t--g~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~-~i~~V  479 (894)
                      ..|..+|.+++|.|-.. +|++|+.|...++|++..  ..+.  ..|+ |.-               ..++.+. .-+.|
T Consensus       175 l~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lr-h~~---------------~~~~~s~~~nkdV  238 (524)
T KOG0273|consen  175 LRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLR-HCI---------------REGGKSVPSNKDV  238 (524)
T ss_pred             ccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhh-hhh---------------hhhcccCCccCCc
Confidence            34999999999999666 999999999999999874  1111  1111 110               0011111 11379


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      ++|+|+.+|.+||+|+.||.++||+.........-.|.++|.+|.|+.+|.||++++.|+.              +.+||
T Consensus       239 T~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~t--------------tilwd  304 (524)
T KOG0273|consen  239 TSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGT--------------TILWD  304 (524)
T ss_pred             ceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCcc--------------EEEEe
Confidence            9999999999999999999999999764444444457899999999999999999999997              78999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      ..+|...+.+.-|..+-..|.|-.+ ..|++++.||.|+|+.+....+                                
T Consensus       305 ~~~g~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P--------------------------------  351 (524)
T KOG0273|consen  305 AHTGTVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRP--------------------------------  351 (524)
T ss_pred             ccCceEEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCc--------------------------------
Confidence            9999999999889888788899755 4588889999999997743221                                


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                                                                                      
T Consensus       352 --------------------------------------------------------------------------------  351 (524)
T KOG0273|consen  352 --------------------------------------------------------------------------------  351 (524)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce---ee
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA---TA  796 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~---~~  796 (894)
                                                       ...+.+|.+.|.+|.|.|.+.+|++++.|++++||.......   +.
T Consensus       352 ---------------------------------~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~  398 (524)
T KOG0273|consen  352 ---------------------------------VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQ  398 (524)
T ss_pred             ---------------------------------ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhh
Confidence                                             113456889999999999999999999999999999766554   44


Q ss_pred             ccccCCCceEeecCC---------CeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063        797 GFLLSCPDFLFDFDT---------TREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  867 (894)
Q Consensus       797 ~~~~~~~~~~fS~dg---------~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg  867 (894)
                      .|...+..+.|+|+|         ..+++++.+.    .|++||+..|.++..|..|..+|.+|+|||+|+|||+|+.||
T Consensus       399 ~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~ds----tV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg  474 (524)
T KOG0273|consen  399 AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDS----TVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDG  474 (524)
T ss_pred             hhccceeeEeecCCCCccCCCcCCceEEEeecCC----eEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCC
Confidence            555566667788744         4677777776    699999999999999999999999999999999999999999


Q ss_pred             cEEEEecCccccccccccCc
Q psy10063        868 FVRLHTFDQAYFDYTFDISE  887 (894)
Q Consensus       868 ~V~vWdl~~~~~~~~~~~~~  887 (894)
                      .|.||+.+.+++...+.-..
T Consensus       475 ~V~iws~~~~~l~~s~~~~~  494 (524)
T KOG0273|consen  475 CVHIWSTKTGKLVKSYQGTG  494 (524)
T ss_pred             eeEeccccchheeEeecCCC
Confidence            99999999998888775433

>KOG0279|consensus

Probab=99.98  E-value=2.6e-30  Score=253.97  Aligned_cols=189  Identities=24%  Similarity=0.328  Sum_probs=164.5

Q ss_pred             ccceeeeeccCccEEEecC------CCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC
Q psy10063        379 SVDRLNSMSPAARKLATNA------EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK  452 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~------~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~  452 (894)
                      ..+.+...+.|...+...-      -+..+..|.||...|..++.++||++.++++.|+.+++||+.+|+..+.|.+|..
T Consensus        27 ~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~  106 (315)
T KOG0279|consen   27 NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTK  106 (315)
T ss_pred             CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCC
Confidence            3445556666666665432      1356778999999999999999999999999999999999999999999999998


Q ss_pred             CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCC--
Q psy10063        453 EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPI--  528 (894)
Q Consensus       453 ~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spd--  528 (894)
                                               .|.+++|++|.++|++|+.|.+|++|+...+.......+  .+.|.|+.|+|.  
T Consensus       107 -------------------------dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~  161 (315)
T KOG0279|consen  107 -------------------------DVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNES  161 (315)
T ss_pred             -------------------------ceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCC
Confidence                                     788899999999999999999999999875554444443  578999999998  


Q ss_pred             CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        529 LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       529 g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ..+|+.++.|+.              |++||++..+....+.||.+.|..+.++|||..+++|+.||.+.+||++.++
T Consensus       162 ~p~Ivs~s~Dkt--------------vKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k  225 (315)
T KOG0279|consen  162 NPIIVSASWDKT--------------VKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGK  225 (315)
T ss_pred             CcEEEEccCCce--------------EEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCc
Confidence            678999999987              9999999999999999999999999999999999999999999999997654

>KOG0306|consensus

Probab=99.98  E-value=9.6e-30  Score=278.50  Aligned_cols=428  Identities=18%  Similarity=0.177  Sum_probs=291.1

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCC-CCeeEEEEcCCCCEEEEEeCCCCc------------------cceE
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAK-EPINDMQFSKDATMFITASHSQAV------------------EPIN  480 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~-~~V~~v~~spdg~~la~~~~d~~i------------------~~V~  480 (894)
                      .|++++.... ..|.+||+++|+..+.+..... ..|.|++-+++.-+||+|-.||.+                  ..|.
T Consensus        33 ~Gr~va~~a~-E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt  111 (888)
T KOG0306|consen   33 KGRAVAVSAL-EQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVT  111 (888)
T ss_pred             CCcEEEEecc-ccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceE
Confidence            4777776333 3699999999966555443222 279999999999999999999987                  5899


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +|.|...|.+|++||.|+.|.+||+-...-+..+.+ .+.|..+-|..+.++|++.+.|..              |++||
T Consensus       112 ~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~--------------iK~Wd  177 (888)
T KOG0306|consen  112 TLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSM--------------IKFWD  177 (888)
T ss_pred             EEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCce--------------EEEEe
Confidence            999999999999999999999999988777777775 578888888888889999998886              99999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc------------------------cc-------
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL------------------------DI-------  608 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~------------------------~~-------  608 (894)
                      +++..++.....|.+.|+.+++++  +.+++++.|+.++||++.-..                        .+       
T Consensus       178 L~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s  255 (888)
T KOG0306|consen  178 LETQHCFETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFS  255 (888)
T ss_pred             cccceeeeEEecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCc
Confidence            999999999999999999999976  789999999999999982100                        00       


Q ss_pred             -----------------------------c---------------------------------CCCceeeeEECcCCcE-
Q psy10063        609 -----------------------------S---------------------------------EGSFTSSSTQQPDGLV-  625 (894)
Q Consensus       609 -----------------------------~---------------------------------~~~~v~~~~~spdg~~-  625 (894)
                                                   +                                 ....+.++.+.|.+.. 
T Consensus       256 ~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~  335 (888)
T KOG0306|consen  256 DRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTE  335 (888)
T ss_pred             ccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcc
Confidence                                         0                                 0001112222222210 


Q ss_pred             --EEecCCeEEEEecccCC--C-------------------------CCCCeeeeccccCCCceEEechhhHHHhhhccc
Q psy10063        626 --YPSQGGHIHSLSSHSTS--S-------------------------TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMS  676 (894)
Q Consensus       626 --l~~~~g~i~~~~~~~~~--~-------------------------~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~  676 (894)
                        ++........|......  .                         .+...+++|   ....+.+|........+..  
T Consensus       336 ~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sg---a~~SikiWn~~t~kciRTi--  410 (888)
T KOG0306|consen  336 NTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASG---AGESIKIWNRDTLKCIRTI--  410 (888)
T ss_pred             eeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeec---CCCcEEEEEccCcceeEEe--
Confidence              00011111111111110  0                         111112222   2455666654433221100  


Q ss_pred             ccCCCCeEEeeccCCc-ceeEeccCccee-----------------EEeeeEEEcCCCCEEEecccCccccccCCcceee
Q psy10063        677 INHSGTRLHVNPFDEQ-QSVELTKDEQIE-----------------MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTW  738 (894)
Q Consensus       677 ~~~~g~~~~~~~~~~~-~~~~~s~~~~~~-----------------~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~  738 (894)
                        ..+..+......+. ..+.-...+++.                 .....++..++++.++.+..|..       +++|
T Consensus       411 --~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDkt-------VkfW  481 (888)
T KOG0306|consen  411 --TCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKT-------VKFW  481 (888)
T ss_pred             --ccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcE-------EEEE
Confidence              00011111111111 111111111111                 11233556666666665554443       5666


Q ss_pred             ccccCcccccCCCCcceec-------CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce---eeccccCCCceEee
Q psy10063        739 GHIEGTPFKLDGSDTPILA-------GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA---TAGFLLSCPDFLFD  808 (894)
Q Consensus       739 ~~~~g~~~~~dg~~~~~~~-------~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~---~~~~~~~~~~~~fS  808 (894)
                      +..--..  ..|...+++.       .-.+.|.|+.+||||++||++--|.+++||-+++.+.   +.+|..++.++-+|
T Consensus       482 df~l~~~--~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS  559 (888)
T KOG0306|consen  482 DFKLVVS--VPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDIS  559 (888)
T ss_pred             eEEEEec--cCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEecc
Confidence            4321111  1122211111       2357799999999999999999999999999998876   66788888899999


Q ss_pred             cCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        809 FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       809 ~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      ||++.++++++|+    .|+||-++.|.|.+.+.+|.+.|.+|.|.|+..++++||.||.|+-||-+.-+.+.+++
T Consensus       560 ~DSklivTgSADK----nVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~  631 (888)
T KOG0306|consen  560 PDSKLIVTGSADK----NVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLD  631 (888)
T ss_pred             CCcCeEEeccCCC----ceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeec
Confidence            9999999999999    59999999999999999999999999999999999999999999999987776666654

>KOG0284|consensus

Probab=99.98  E-value=1.7e-31  Score=274.28  Aligned_cols=282  Identities=19%  Similarity=0.269  Sum_probs=237.5

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      ..-+..|..|.|.|+|++|++|+..|.+.||+...-.....++.|..                         .|+++.|+
T Consensus        93 NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs-------------------------~Vr~m~ws  147 (464)
T KOG0284|consen   93 NKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDS-------------------------PVRTMKWS  147 (464)
T ss_pred             cccccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcc-------------------------cceeEEEc
Confidence            34557899999999999999999999999999754433445567887                         78999999


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      .+|.++++|+.+|.|++|+..-.-......++ ..|++++|+|....+++++.|+.              |+|||....+
T Consensus       148 ~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~--------------ikiWdf~~~k  213 (464)
T KOG0284|consen  148 HNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGT--------------IKIWDFRMPK  213 (464)
T ss_pred             cCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCe--------------EEEEeccCCc
Confidence            99999999999999999997644443333454 88999999999999999999997              8999999999


Q ss_pred             eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCC
Q psy10063        565 EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSST  644 (894)
Q Consensus       565 ~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~  644 (894)
                      +.+.|.||...|.+++|+|....|++|+.|..|++||.+++.++                                    
T Consensus       214 ee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl------------------------------------  257 (464)
T KOG0284|consen  214 EERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCL------------------------------------  257 (464)
T ss_pred             hhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchh------------------------------------
Confidence            99999999999999999999999999999999999998765422                                    


Q ss_pred             CCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEeccc
Q psy10063        645 DTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPF  724 (894)
Q Consensus       645 d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~  724 (894)
                                                                                                      
T Consensus       258 --------------------------------------------------------------------------------  257 (464)
T KOG0284|consen  258 --------------------------------------------------------------------------------  257 (464)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccC
Q psy10063        725 DEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLS  801 (894)
Q Consensus       725 ~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~  801 (894)
                                                   ..+.+|...|..+.|.+++.+|++++.|..+++||++..+.+.   .+...
T Consensus       258 -----------------------------~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkd  308 (464)
T KOG0284|consen  258 -----------------------------ATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKD  308 (464)
T ss_pred             -----------------------------hhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhh
Confidence                                         1345688889999999999999999999999999999776654   45566


Q ss_pred             CCceEeecCCCe-EEEEecCCCCceeEEEeecCCcceeeec-cCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        802 CPDFLFDFDTTR-EVTTTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       802 ~~~~~fS~dg~~-l~~as~d~~g~~~I~vwd~~tg~~l~~l-~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      +.++.|+|--.- +.+++.|+    .|..|.+...+.+..+ .+|...|++|+|+|-|.+|++|+.|..+++|.-.
T Consensus       309 v~~~~WhP~~~~lftsgg~Dg----svvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  309 VTSLTWHPLNESLFTSGGSDG----SVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             heeeccccccccceeeccCCC----ceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence            778889997554 55555565    5899999865666555 4899999999999999999999999999999753

>KOG0278|consensus

Probab=99.97  E-value=2.6e-31  Score=256.35  Aligned_cols=287  Identities=20%  Similarity=0.288  Sum_probs=246.2

Q ss_pred             EEEecCCCCEEEEEEcc---CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        403 MQVTDQSAKITSLLWGN---LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~sp---dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      +...||..+|..|+|||   +|-+|++++.||.-.|-.-++|..+..|.+|++                         .|
T Consensus         8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkg-------------------------av   62 (334)
T KOG0278|consen    8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKG-------------------------AV   62 (334)
T ss_pred             eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCc-------------------------ce
Confidence            46789999999999995   899999999999999999999999999999998                         77


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      ++..+..+..+.++++.|-+.+|||.-+|..++.|.|..-|.+++|+.|..+|+.|+.+..              +||||
T Consensus        63 w~~~l~~na~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekl--------------lrvfd  128 (334)
T KOG0278|consen   63 WSATLNKNATRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKL--------------LRVFD  128 (334)
T ss_pred             eeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHH--------------hhhhh
Confidence            7777777778889999999999999999999999999999999999999999999999886              78888


Q ss_pred             ccccc-eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        560 LIFEE-EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       560 ~~~~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                      +...+ +...+.+|.+.|..+-|....+.|++...|+.||+||.+++..+.                         .+. 
T Consensus       129 ln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~-------------------------sL~-  182 (334)
T KOG0278|consen  129 LNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQ-------------------------SLE-  182 (334)
T ss_pred             ccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEE-------------------------EEe-
Confidence            87543 456788999999999999988999999999999999998764221                         000 


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                                                                                                      
T Consensus       183 --------------------------------------------------------------------------------  182 (334)
T KOG0278|consen  183 --------------------------------------------------------------------------------  182 (334)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF  798 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~  798 (894)
                                                              -...|.++.+++||++|.++.. +.|++||......++.+
T Consensus       183 ----------------------------------------~~s~VtSlEvs~dG~ilTia~g-ssV~Fwdaksf~~lKs~  221 (334)
T KOG0278|consen  183 ----------------------------------------FNSPVTSLEVSQDGRILTIAYG-SSVKFWDAKSFGLLKSY  221 (334)
T ss_pred             ----------------------------------------cCCCCcceeeccCCCEEEEecC-ceeEEeccccccceeec
Confidence                                                    0123567778889988887654 45999999999998887


Q ss_pred             ccCC--CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-cCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        799 LLSC--PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       799 ~~~~--~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      ...+  .+..++|+...+++++.+.    .++.||+.+|+.+..+ ++|.++|.||.|+|||...++||+||+||||...
T Consensus       222 k~P~nV~SASL~P~k~~fVaGged~----~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~  297 (334)
T KOG0278|consen  222 KMPCNVESASLHPKKEFFVAGGEDF----KVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT  297 (334)
T ss_pred             cCccccccccccCCCceEEecCcce----EEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence            7654  4667889887777777665    6999999999999886 8999999999999999999999999999999986


Q ss_pred             cccc
Q psy10063        876 QAYF  879 (894)
Q Consensus       876 ~~~~  879 (894)
                      .++.
T Consensus       298 ~~~~  301 (334)
T KOG0278|consen  298 PGKT  301 (334)
T ss_pred             CCCc
Confidence            5543

>KOG0286|consensus

Probab=99.97  E-value=7.8e-30  Score=251.87  Aligned_cols=196  Identities=20%  Similarity=0.291  Sum_probs=166.3

Q ss_pred             cccCCCccceeeeeccCccEEEecCCCeEEEE-----------EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC
Q psy10063        373 ILSSPLSVDRLNSMSPAARKLATNAEPVVKMQ-----------VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG  441 (894)
Q Consensus       373 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~-----------l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg  441 (894)
                      .+..+........|++|.|.|++++.+-..+.           +.-....|..++|+|.|+++|+|+.|....||++...
T Consensus        50 ~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~  129 (343)
T KOG0286|consen   50 TLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTR  129 (343)
T ss_pred             EecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccc
Confidence            34445555555667777777777665433332           2234578999999999999999999999999999855


Q ss_pred             ------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe
Q psy10063        442 ------RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT  515 (894)
Q Consensus       442 ------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~  515 (894)
                            +..++|.+|.+                         .+.|+.|-+| .+|++++.|.++.+||+++|+.+..|.
T Consensus       130 d~~g~~~v~r~l~gHtg-------------------------ylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~  183 (343)
T KOG0286|consen  130 DAEGNVRVSRELAGHTG-------------------------YLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFH  183 (343)
T ss_pred             cccccceeeeeecCccc-------------------------eeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEec
Confidence                  45677889988                         7778888775 458999999999999999999999998


Q ss_pred             C-CCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        516 T-ERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       516 ~-~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      + .+.|.+|+++| +++.+++|+-|+.              .++||++.+.+++.|.+|...|.+|.|.|+|.-|++|++
T Consensus       184 GH~gDV~slsl~p~~~ntFvSg~cD~~--------------aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSD  249 (343)
T KOG0286|consen  184 GHTGDVMSLSLSPSDGNTFVSGGCDKS--------------AKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSD  249 (343)
T ss_pred             CCcccEEEEecCCCCCCeEEecccccc--------------eeeeeccCcceeEeecccccccceEEEccCCCeeeecCC
Confidence            6 58999999999 9999999999997              899999999999999999999999999999999999999


Q ss_pred             CCcEEEEECCCCccc
Q psy10063        594 DGFLISNTLSNGLDI  608 (894)
Q Consensus       594 Dg~I~vwdl~~~~~~  608 (894)
                      |+..|+||++..+++
T Consensus       250 D~tcRlyDlRaD~~~  264 (343)
T KOG0286|consen  250 DATCRLYDLRADQEL  264 (343)
T ss_pred             CceeEEEeecCCcEE
Confidence            999999999887654

>KOG0273|consensus

Probab=99.97  E-value=1.7e-29  Score=263.99  Aligned_cols=275  Identities=17%  Similarity=0.245  Sum_probs=234.5

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ..|++|+|+.+|.+||+|+.||.++||+.. |.++..|..|++                         +|.+|.|..+|.
T Consensus       236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~Hkg-------------------------PI~slKWnk~G~  289 (524)
T KOG0273|consen  236 KDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHKG-------------------------PIFSLKWNKKGT  289 (524)
T ss_pred             CCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhccCC-------------------------ceEEEEEcCCCC
Confidence            679999999999999999999999999965 888899999998                         889999999999


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCCCCe-eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTERPV-NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v-~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      +|++++.|+++.|||..+|.+.+.|..+... ..+.|-.+ ..+++.+.++.              |+|+.+....++..
T Consensus       290 yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~--------------i~V~kv~~~~P~~t  354 (524)
T KOG0273|consen  290 YILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN-DEFATSSTDGC--------------IHVCKVGEDRPVKT  354 (524)
T ss_pred             EEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC-ceEeecCCCce--------------EEEEEecCCCccee
Confidence            9999999999999999999999999876544 77888754 46777777876              77888888889999


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCe
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGG  648 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~  648 (894)
                      +.||.+.|.+|.|.|.|.+|++++.|++++||.+......                                        
T Consensus       355 ~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~----------------------------------------  394 (524)
T KOG0273|consen  355 FIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV----------------------------------------  394 (524)
T ss_pred             eecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch----------------------------------------
Confidence            9999999999999999999999999999999987443211                                        


Q ss_pred             eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063        649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  728 (894)
Q Consensus       649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~  728 (894)
                                                                                                      
T Consensus       395 --------------------------------------------------------------------------------  394 (524)
T KOG0273|consen  395 --------------------------------------------------------------------------------  394 (524)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---------CCEEEEecCCCcEEEEEccCCceeec--
Q psy10063        729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---------REKLALALADKVSERYRDRKNKATAG--  797 (894)
Q Consensus       729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---------g~~Latgs~Dg~I~iwd~~~~~~~~~--  797 (894)
                                               .-+.+|...|+.+.|+|.         +..|++++.|++|++||+..+.++..  
T Consensus       395 -------------------------~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~  449 (524)
T KOG0273|consen  395 -------------------------HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM  449 (524)
T ss_pred             -------------------------hhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec
Confidence                                     012223334444444443         56789999999999999999998664  


Q ss_pred             -cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        798 -FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       798 -~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                       +...+.+++|||+|+++++++-++.    |.||+.+.+++++.+.+- +.|..|+|+.+|.+|..+-.||.|+|-|+.
T Consensus       450 kH~~pVysvafS~~g~ylAsGs~dg~----V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  450 KHQEPVYSVAFSPNGRYLASGSLDGC----VHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             cCCCceEEEEecCCCcEEEecCCCCe----eEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence             4566789999999999999999984    999999999999988765 569999999999999999999999999875

>KOG0276|consensus

Probab=99.97  E-value=2.2e-28  Score=262.66  Aligned_cols=450  Identities=13%  Similarity=0.146  Sum_probs=297.4

Q ss_pred             eecccCCCccccCCCccceeeeeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE
Q psy10063        364 LIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE  443 (894)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~  443 (894)
                      .+.+++..|.+........+..|.-+-+        .+...+.-..-+|+++.|-.-..+|++|++|..||||+..+++.
T Consensus        18 sVd~HPtePw~la~LynG~V~IWnyetq--------tmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ek   89 (794)
T KOG0276|consen   18 SVDFHPTEPWILAALYNGDVQIWNYETQ--------TMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEK   89 (794)
T ss_pred             eeecCCCCceEEEeeecCeeEEEecccc--------eeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccccee
Confidence            3444444444444444444433333332        23334555678899999999889999999999999999999999


Q ss_pred             EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------cceEEEEEec-CCCEEEEEECCCCEEEE
Q psy10063        444 LESISGHAKEPINDMQFSKDATMFITASHSQAV-------------------EPINDMQFSK-DATMFITASKDHTAKLF  503 (894)
Q Consensus       444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iw  503 (894)
                      ++.|..|.+ .|++++.+|..-+++++++|..+                   ..|.+|+|.| |...+|+++.|++|+||
T Consensus        90 V~~FeAH~D-yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVW  168 (794)
T KOG0276|consen   90 VKTFEAHSD-YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVW  168 (794)
T ss_pred             eEEeecccc-ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEE
Confidence            999999999 99999999999999999998777                   5899999999 78899999999999999


Q ss_pred             EcCCCcEEEEEeC-CCCeeEEEEcCCC--CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063        504 TTHDRQLLKTYTT-ERPVNSAALSPIL--PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  580 (894)
Q Consensus       504 dl~~~~~~~~~~~-~~~v~~l~~spdg--~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~  580 (894)
                      .+....+..++++ ...|.|+.|-+-|  .+|++|+.|..              |+|||.++..|++.|.||...|..+.
T Consensus       169 slgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~t--------------iKvWDyQtk~CV~TLeGHt~Nvs~v~  234 (794)
T KOG0276|consen  169 SLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLT--------------IKVWDYQTKSCVQTLEGHTNNVSFVF  234 (794)
T ss_pred             EcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCce--------------EEEeecchHHHHHHhhcccccceEEE
Confidence            9999999999985 5889999998865  58888888876              99999999999999999999999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCC-cEEEecCCeEEEEecccCCCC---C-CCeeee
Q psy10063        581 FHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDG-LVYPSQGGHIHSLSSHSTSST---D-TGGVFS  651 (894)
Q Consensus       581 ~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg-~~l~~~~g~i~~~~~~~~~~~---d-~~~i~s  651 (894)
                      |+|.-.+|++|++||+||||...+.+...    ..+.+.+++..+.. ++....+.....+......+.   | .+.++-
T Consensus       235 fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgreeP~vsMd~~gKIiw  314 (794)
T KOG0276|consen  235 FHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGREEPAVSMDSNGKIIW  314 (794)
T ss_pred             ecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccCCCCceeecCCccEEE
Confidence            99999999999999999999987765332    34555566554433 333344333333332211110   0 001111


Q ss_pred             ccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcccccc
Q psy10063        652 GSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVD  731 (894)
Q Consensus       652 gs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~  731 (894)
                      +.......+.+.......       ...+|.         ...+.....+...+....++-++.|+.++++.....    
T Consensus       315 a~~~ei~~~~~ks~~~~~-------ev~DgE---------rL~LsvKeLgs~eiyPq~L~hsPNGrfV~VcgdGEy----  374 (794)
T KOG0276|consen  315 AVHSEIQAVNLKSVGAQK-------EVTDGE---------RLPLSVKELGSVEIYPQTLAHSPNGRFVVVCGDGEY----  374 (794)
T ss_pred             EcCceeeeeeceeccCcc-------cccCCc---------cccchhhhccccccchHHhccCCCCcEEEEecCccE----
Confidence            110011111110000000       000111         111111112222222233455666666665432211    


Q ss_pred             CCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCC
Q psy10063        732 ASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDT  811 (894)
Q Consensus       732 ~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg  811 (894)
                          .++        .    .+.....+.+....+.|++|...+|+-..++.|+++  +..+..+.+..... ..+-..|
T Consensus       375 ----iIy--------T----ala~RnK~fG~~~eFvw~~dsne~avRes~~~vki~--knfke~ksi~~~~~-~e~i~gg  435 (794)
T KOG0276|consen  375 ----IIY--------T----ALALRNKAFGSGLEFVWAADSNEFAVRESNGNVKIF--KNFKEHKSIRPDMS-AEGIFGG  435 (794)
T ss_pred             ----EEE--------E----eeehhhcccccceeEEEcCCCCeEEEEecCCceEEE--ecceeccccccccc-eeeecCC
Confidence                111        0    011112234455677888998888888888999999  55555554433322 2233445


Q ss_pred             CeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        812 TREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       812 ~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .+|.+.+.+     .+++||++++++++++....   ..|.|+.+|.+++.++.|. .+|+.+........++
T Consensus       436 ~Llg~~ss~-----~~~fydW~~~~lVrrI~v~~---k~v~w~d~g~lVai~~d~S-fyil~~n~d~v~~a~e  499 (794)
T KOG0276|consen  436 PLLGVRSSD-----FLCFYDWESGELVRRIEVTS---KHVYWSDNGELVAIAGDDS-FYILKFNADAVANAVE  499 (794)
T ss_pred             ceEEEEeCC-----eEEEEEcccceEEEEEeecc---ceeEEecCCCEEEEEecCc-eeEEEecHHHHHHHHh
Confidence            556665555     39999999999999987543   3579999999888887665 6677776555444433

>KOG1539|consensus

Probab=99.97  E-value=9.8e-28  Score=266.00  Aligned_cols=488  Identities=13%  Similarity=0.140  Sum_probs=310.4

Q ss_pred             CccchhhhchheeecccCCCccccCCCccceeeeeccCccEEEec-CCCeEEEEEecCCCCEEEEEEccCCCEEEEecCC
Q psy10063        352 NNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATN-AEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAK  430 (894)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~D  430 (894)
                      ..+|++......++.....-|..+.....++...|..-|+.+..- ....++..+.+|...|.-+.  +-|.+|+++..+
T Consensus        56 ksfqvYd~~kl~ll~vs~~lp~~I~alas~~~~vy~A~g~~i~~~~rgk~i~~~~~~~~a~v~~l~--~fGe~lia~d~~  133 (910)
T KOG1539|consen   56 KSFQVYDVNKLNLLFVSKPLPDKITALASDKDYVYVASGNKIYAYARGKHIRHTTLLHGAKVHLLL--PFGEHLIAVDIS  133 (910)
T ss_pred             ceEEEEeccceEEEEecCCCCCceEEEEecCceEEEecCcEEEEEEccceEEEEeccccceEEEEe--eecceEEEEEcc
Confidence            345555555555554443333333333333333344444444332 33467778888998888764  458899999999


Q ss_pred             CcEEEEecCCC-eE----EEEecCCCCCCeeEEEEcCCC--CEEEEEeCCCCc------------------cceEEEEEe
Q psy10063        431 GDICTWDLRMG-RE----LESISGHAKEPINDMQFSKDA--TMFITASHSQAV------------------EPINDMQFS  485 (894)
Q Consensus       431 g~I~iWd~~tg-~~----~~~l~~h~~~~V~~v~~spdg--~~la~~~~d~~i------------------~~V~~l~~s  485 (894)
                      +.|.||+...+ +.    +..++...+ .|.++ ++|+-  ..|+.|+..|.+                  ..|+++.=+
T Consensus       134 ~~l~vw~~s~~~~e~~l~~~~~~~~~~-~Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqs  211 (910)
T KOG1539|consen  134 NILFVWKTSSIQEELYLQSTFLKVEGD-FITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQS  211 (910)
T ss_pred             CcEEEEEeccccccccccceeeeccCC-ceeeE-ecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccC
Confidence            99999998874 11    112222222 34433 34432  345666665554                  578888888


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeEEEEecccc
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      |--..++.|..+|.|.|++++.++.+..|+++ ++|.+++|.-||..+++.+.. |.              +.+||++..
T Consensus       212 PaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~--------------m~~wDLe~k  277 (910)
T KOG1539|consen  212 PALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGD--------------MAFWDLEKK  277 (910)
T ss_pred             CcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCce--------------EEEEEcCCC
Confidence            88889999999999999999999999999996 999999999999987776655 53              889999988


Q ss_pred             ceEEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        564 EEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       564 ~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      +.+..+. .|.+.|..+.|.+....|++.+.|..+++|=.+.+.-.              .+++....||.....+..+.
T Consensus       278 kl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~--------------pR~LR~R~GHs~Pp~~irfy  343 (910)
T KOG1539|consen  278 KLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGV--------------PRLLRSRGGHSAPPSCIRFY  343 (910)
T ss_pred             eeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCc--------------chheeeccCCCCCchheeee
Confidence            8887776 79999999999999999999999999999966543210              02333333443333333333


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhccc--ccCCCCeEEee---ccCCcceeEeccCcc---------------
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMS--INHSGTRLHVN---PFDEQQSVELTKDEQ---------------  702 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~--~~~~g~~~~~~---~~~~~~~~~~s~~~~---------------  702 (894)
                      ...+..+++++  .|+.++..........+....  ....++.+.+.   .+.....+.|..+..               
T Consensus       344 ~~~g~~ilsa~--~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~  421 (910)
T KOG1539|consen  344 GSQGHFILSAK--QDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGK  421 (910)
T ss_pred             ccCcEEEEecc--cCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCc
Confidence            33344444444  333333322221111110000  00000001000   001111111111111               


Q ss_pred             -------------------------eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceec
Q psy10063        703 -------------------------IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA  757 (894)
Q Consensus       703 -------------------------~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~  757 (894)
                                               .......++++..|....++..       ...+.++..+.|......|    ...
T Consensus       422 ~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S-------~G~Id~fNmQSGi~r~sf~----~~~  490 (910)
T KOG1539|consen  422 RSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYS-------KGTIDRFNMQSGIHRKSFG----DSP  490 (910)
T ss_pred             ceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEecc-------CCeEEEEEcccCeeecccc----cCc
Confidence                                     1111122222333322222211       1123333333333322222    135


Q ss_pred             CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        758 GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       758 ~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      .|...|..++...-++.+++++.+|.+++|+..+...+..+..++.  .++++.....++++.++-    .|+|+|+.+.
T Consensus       491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf----~I~vvD~~t~  566 (910)
T KOG1539|consen  491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDF----SIRVVDVVTR  566 (910)
T ss_pred             cccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCce----eEEEEEchhh
Confidence            7899999999999999999999999999999998887666665544  455666666777666654    6999999999


Q ss_pred             ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcc
Q psy10063        836 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEE  888 (894)
Q Consensus       836 ~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~  888 (894)
                      +.++.|.||...|++++|||||+||++++.|++||+||+..++++..+.++.+
T Consensus       567 kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~  619 (910)
T KOG1539|consen  567 KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSP  619 (910)
T ss_pred             hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCc
Confidence            99999999999999999999999999999999999999999999988876543

>KOG0292|consensus

Probab=99.97  E-value=2.7e-29  Score=278.52  Aligned_cols=313  Identities=18%  Similarity=0.266  Sum_probs=258.9

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +...+.+|..++|+|..-+|+++-..|.|++||.+-+.++.+|.+|.+                         +|+.|+|
T Consensus         5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdG-------------------------pVRgv~F   59 (1202)
T KOG0292|consen    5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDG-------------------------PVRGVDF   59 (1202)
T ss_pred             hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCC-------------------------ccceeee
Confidence            345678899999999999999999999999999999999999999998                         7888888


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +|.+.+|++|+.|..|+||+.+..+|+.++.++ +.|+.+.|++.-.+|++++.|..              ||||+++++
T Consensus        60 H~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQT--------------IrIWNwqsr  125 (1202)
T KOG0292|consen   60 HPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQT--------------IRIWNWQSR  125 (1202)
T ss_pred             cCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCe--------------EEEEeccCC
Confidence            888999999999999999999999999888764 88999999999999999999997              999999999


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      +++..+.||.+.|.|.+|+|....|+++|.|.+|||||+..-++....         |.+            +       
T Consensus       126 ~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~---------pg~------------~-------  177 (1202)
T KOG0292|consen  126 KCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKA---------PGS------------L-------  177 (1202)
T ss_pred             ceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCC---------CCC------------c-------
Confidence            999999999999999999999999999999999999999764321100         000            0       


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                   +..++..                .+   .                                      
T Consensus       178 -------------e~~~~~~----------------~~---~--------------------------------------  187 (1202)
T KOG0292|consen  178 -------------EDQMRGQ----------------QG---N--------------------------------------  187 (1202)
T ss_pred             -------------hhhhhcc----------------cc---c--------------------------------------
Confidence                         0000000                00   0                                      


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-----eecc
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-----TAGF  798 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-----~~~~  798 (894)
                                 ..++|       ..|.-...++.||...|.-++|+|.-.+|++|+.|+.|++|+....+.     ++++
T Consensus       188 -----------~dLfg-------~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH  249 (1202)
T KOG0292|consen  188 -----------SDLFG-------QTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGH  249 (1202)
T ss_pred             -----------hhhcC-------CcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcc
Confidence                       00000       001111246789999999999999999999999999999999876554     5677


Q ss_pred             ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      ...+.++.|+|....+++.+.|+    .|+|||+.....+..++...++-|.|+-+|...+++.| .|+-+.||.++..
T Consensus       250 ~nnVssvlfhp~q~lIlSnsEDk----sirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAg-HDsGm~VFkleRE  323 (1202)
T KOG0292|consen  250 YNNVSSVLFHPHQDLILSNSEDK----SIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAG-HDSGMIVFKLERE  323 (1202)
T ss_pred             cCCcceEEecCccceeEecCCCc----cEEEEecccccceeeeeccCCeEEEEEecCCcceeeee-cCCceEEEEEccc
Confidence            77888999999999999999998    59999999999999998888899999999999966666 5666888888744

>KOG0263|consensus

Probab=99.97  E-value=2.9e-29  Score=278.47  Aligned_cols=167  Identities=26%  Similarity=0.442  Sum_probs=157.2

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ....|.||.++|..+.|+|+.++|+++++|++||||.+.+..++-.++||..                         +|+
T Consensus       443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~-------------------------PVw  497 (707)
T KOG0263|consen  443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLA-------------------------PVW  497 (707)
T ss_pred             eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCc-------------------------cee
Confidence            3346889999999999999999999999999999999999999999999988                         788


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +++|+|-|-+||+++.|++.++|.....+.++.|.++ ..|.|+.|+|.+.|++.|+.|..              ||+||
T Consensus       498 dV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~t--------------VRlWD  563 (707)
T KOG0263|consen  498 DVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRT--------------VRLWD  563 (707)
T ss_pred             eEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCce--------------EEEEE
Confidence            8888889999999999999999999999999998865 89999999999999999999987              99999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +..|..++.|.||.++|.+|+|+|+|++|++|+.||.|++||+..+.
T Consensus       564 v~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~  610 (707)
T KOG0263|consen  564 VSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS  610 (707)
T ss_pred             cCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc
Confidence            99999999999999999999999999999999999999999996643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=7.6e-28  Score=295.66  Aligned_cols=288  Identities=12%  Similarity=0.122  Sum_probs=223.0

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +..|.+.|.+++|+|+|++||+|+.|+.|+||++........ ..|.  .+..+.  ..             ..|.+++|
T Consensus       479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~-~~~~--~~~~~~--~~-------------~~v~~l~~  540 (793)
T PLN00181        479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR-DIHY--PVVELA--SR-------------SKLSGICW  540 (793)
T ss_pred             ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccc-cccc--ceEEec--cc-------------CceeeEEe
Confidence            345999999999999999999999999999999764210000 0010  111111  00             15888899


Q ss_pred             ec-CCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        485 SK-DATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       485 sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      ++ ++.+|++++.||.|+|||+..++.+..+. |.+.|.+++|+| ++.+|++++.|+.              |++||+.
T Consensus       541 ~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~--------------v~iWd~~  606 (793)
T PLN00181        541 NSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGS--------------VKLWSIN  606 (793)
T ss_pred             ccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCE--------------EEEEECC
Confidence            87 57899999999999999999999888886 468899999997 7889999999987              8999999


Q ss_pred             ccceEEEccCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        562 FEEEFARIKGHFGPINSLAFH-PDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      .+..+..+..| ..|.+++|+ ++|.+|++|+.||.|++||++.....                                
T Consensus       607 ~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~--------------------------------  653 (793)
T PLN00181        607 QGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLP--------------------------------  653 (793)
T ss_pred             CCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCcc--------------------------------
Confidence            99888888755 679999995 57899999999999999998542100                                


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       654 --------------------------------------------------------------------------------  653 (793)
T PLN00181        654 --------------------------------------------------------------------------------  653 (793)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC------ce
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN------KA  794 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~------~~  794 (894)
                                                      ...+.+|...|.++.|. ++.+|++++.|+.|+|||+...      +.
T Consensus       654 --------------------------------~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~  700 (793)
T PLN00181        654 --------------------------------LCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETP  700 (793)
T ss_pred             --------------------------------ceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcc
Confidence                                            00123466678888886 7889999999999999998743      22


Q ss_pred             ee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-------------ccCCCCCeeEEEEeeCCc
Q psy10063        795 TA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-------------IKGHFGPINSLAFHPDGK  858 (894)
Q Consensus       795 ~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-------------l~gH~~~V~~l~fSpdg~  858 (894)
                      +.   .+...+..++|++++.++++++.++    .|+||+......+..             +..|...|.+|+|++++.
T Consensus       701 l~~~~gh~~~i~~v~~s~~~~~lasgs~D~----~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~  776 (793)
T PLN00181        701 LHSFMGHTNVKNFVGLSVSDGYIATGSETN----EVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSS  776 (793)
T ss_pred             eEEEcCCCCCeeEEEEcCCCCEEEEEeCCC----EEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCC
Confidence            22   2333345678999999999999887    699999865543321             234566799999999999


Q ss_pred             EEEEecCCCcEEEEec
Q psy10063        859 SYASGGEDGFVRLHTF  874 (894)
Q Consensus       859 ~LaS~s~Dg~V~vWdl  874 (894)
                      +|++|+.||.|+||++
T Consensus       777 ~lva~~~dG~I~i~~~  792 (793)
T PLN00181        777 TLVAANSTGNIKILEM  792 (793)
T ss_pred             eEEEecCCCcEEEEec
Confidence            9999999999999997

>KOG0316|consensus

Probab=99.96  E-value=4.7e-28  Score=232.11  Aligned_cols=279  Identities=12%  Similarity=0.133  Sum_probs=239.1

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..|..|++.|.++.|.-||+|.++++.|++|++|+...|.+++++.+|..                         .|..+
T Consensus        11 ~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~-------------------------EVlD~   65 (307)
T KOG0316|consen   11 SILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGH-------------------------EVLDA   65 (307)
T ss_pred             eeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCc-------------------------eeeec
Confidence            36788999999999999999999999999999999999999999999988                         78888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      +.+.|...|++|+.|+.|.+||+.+|+.++.|.+ .+.|..++|..+...+++|+.|..              +|+||.+
T Consensus        66 ~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s--------------~r~wDCR  131 (307)
T KOG0316|consen   66 ALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSS--------------VRLWDCR  131 (307)
T ss_pred             cccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccce--------------eEEEEcc
Confidence            8888889999999999999999999999999986 589999999999999999999997              8888876


Q ss_pred             c--cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        562 F--EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       562 ~--~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      +  .++++.|......|.+|...  +..|+.|+.||.+|.||++.+....                              
T Consensus       132 S~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~s------------------------------  179 (307)
T KOG0316|consen  132 SRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSS------------------------------  179 (307)
T ss_pred             cCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeeh------------------------------
Confidence            5  46788888888899999885  5679999999999999997653210                              


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (307)
T KOG0316|consen  180 --------------------------------------------------------------------------------  179 (307)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL  799 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~  799 (894)
                                                           .--...|.|+.|++|+..++.++.|++|++.|-.+++++..+.
T Consensus       180 -------------------------------------Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYk  222 (307)
T KOG0316|consen  180 -------------------------------------DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYK  222 (307)
T ss_pred             -------------------------------------hhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhc
Confidence                                                 0012358899999999999999999999999999999877665


Q ss_pred             cCCC-----ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCC-eeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        800 LSCP-----DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP-INSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       800 ~~~~-----~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~-V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      ....     ..++......++.++.|+    .|++||+..+.++..+..|... |.+|.++|.-..|+++. ++.+.+|.
T Consensus       223 Ghkn~eykldc~l~qsdthV~sgSEDG----~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~-~~~~~~~~  297 (307)
T KOG0316|consen  223 GHKNMEYKLDCCLNQSDTHVFSGSEDG----KVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT-GHGDLFWY  297 (307)
T ss_pred             ccccceeeeeeeecccceeEEeccCCc----eEEEEEeccceeeeeeccCCceeEEeeecccCccceeEec-CCceecee
Confidence            4432     445777777788888887    5999999999999999999988 89999999888788875 44466775


Q ss_pred             c
Q psy10063        874 F  874 (894)
Q Consensus       874 l  874 (894)
                      -
T Consensus       298 ~  298 (307)
T KOG0316|consen  298 Q  298 (307)
T ss_pred             e
Confidence            4

>KOG0295|consensus

Probab=99.96  E-value=3.9e-29  Score=253.74  Aligned_cols=246  Identities=14%  Similarity=0.146  Sum_probs=208.5

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|..+-|+|+-.+++++++|++|++||..+|++.+.+++ ...|..|+|+..|++|+.++.|-.              ++
T Consensus       110 ~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~--------------~~  175 (406)
T KOG0295|consen  110 SVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLS--------------AK  175 (406)
T ss_pred             ceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccc--------------hh
Confidence            788888888888899999999999999999999988886 477999999999999999999876              78


Q ss_pred             EEeccc-cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        557 FYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       557 vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +||.+. .++++.+.+|...|.+++|-|-|.+|++++.|..|++|+++.+..+                           
T Consensus       176 LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv---------------------------  228 (406)
T KOG0295|consen  176 LWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCV---------------------------  228 (406)
T ss_pred             heeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeE---------------------------
Confidence            888876 6778888999999999999999999999999999999999765321                           


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       229 --------------------------------------------------------------------------------  228 (406)
T KOG0295|consen  229 --------------------------------------------------------------------------------  228 (406)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-  794 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-  794 (894)
                                                            ..+.+|.++|..++...||.++|+++.|.+|++|-+..+++ 
T Consensus       229 --------------------------------------~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k  270 (406)
T KOG0295|consen  229 --------------------------------------KTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK  270 (406)
T ss_pred             --------------------------------------EeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh
Confidence                                                  13455666777788888888888888888888888777733 


Q ss_pred             --eeccccCCCceEeec---------------CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC
Q psy10063        795 --TAGFLLSCPDFLFDF---------------DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG  857 (894)
Q Consensus       795 --~~~~~~~~~~~~fS~---------------dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg  857 (894)
                        ++.+...+..++|.|               .++++++++.|+    .|++||+.+|.++..|.||...|..++|+|.|
T Consensus       271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDk----tIk~wdv~tg~cL~tL~ghdnwVr~~af~p~G  346 (406)
T KOG0295|consen  271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDK----TIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGG  346 (406)
T ss_pred             hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccc----eEEEEeccCCeEEEEEecccceeeeeEEcCCC
Confidence              444444444444433               235788888887    69999999999999999999999999999999


Q ss_pred             cEEEEecCCCcEEEEecCccccccccccC
Q psy10063        858 KSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       858 ~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      +||+|+.+|++|+|||+..++++..+...
T Consensus       347 kyi~ScaDDktlrvwdl~~~~cmk~~~ah  375 (406)
T KOG0295|consen  347 KYILSCADDKTLRVWDLKNLQCMKTLEAH  375 (406)
T ss_pred             eEEEEEecCCcEEEEEeccceeeeccCCC
Confidence            99999999999999999999888877643

>KOG0315|consensus

Probab=99.96  E-value=6.5e-28  Score=233.11  Aligned_cols=189  Identities=16%  Similarity=0.272  Sum_probs=159.7

Q ss_pred             CCCccceeeeeccCccEEEecCCCeEEE------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEPVVKM------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE  443 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~  443 (894)
                      ...+....+.+.||++.|+.+....+++            .+.+|.+.|.++.|..||+++++|++||+++|||++...+
T Consensus        38 h~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~  117 (311)
T KOG0315|consen   38 HPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSC  117 (311)
T ss_pred             cCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCccc
Confidence            3444555668999999999887765554            7889999999999999999999999999999999998776


Q ss_pred             EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCee
Q psy10063        444 LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVN  521 (894)
Q Consensus       444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~  521 (894)
                      .+.|+ |..                         +|.+|..+|....|++|..+|.|+|||+....+.+.+..  ...|.
T Consensus       118 qR~~~-~~s-------------------------pVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~  171 (311)
T KOG0315|consen  118 QRNYQ-HNS-------------------------PVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQ  171 (311)
T ss_pred             chhcc-CCC-------------------------CcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCccee
Confidence            66665 444                         688888888888899999999999999999887776654  46799


Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc------ceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE------EEFARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~------~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      ++...|||++|+.+...|.              ..+|++..+      +++.+++.|.+.+..+.+|||+++|++++.|.
T Consensus       172 sl~v~~dgsml~a~nnkG~--------------cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdk  237 (311)
T KOG0315|consen  172 SLTVMPDGSMLAAANNKGN--------------CYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDK  237 (311)
T ss_pred             eEEEcCCCcEEEEecCCcc--------------EEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCc
Confidence            9999999999999999998              555555432      45667889999999999999999999999999


Q ss_pred             cEEEEECCC
Q psy10063        596 FLISNTLSN  604 (894)
Q Consensus       596 ~I~vwdl~~  604 (894)
                      .++||+.+.
T Consensus       238 tv~iwn~~~  246 (311)
T KOG0315|consen  238 TVKIWNTDD  246 (311)
T ss_pred             eEEEEecCC
Confidence            999998754

>KOG1063|consensus

Probab=99.96  E-value=5.6e-27  Score=255.28  Aligned_cols=459  Identities=14%  Similarity=0.155  Sum_probs=268.7

Q ss_pred             eEEEEEecCCCCEEEEEEccCCC---EEEEecCCCcEEEEecCCC--eEEEEecCCCCCCeeEEE---------------
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQ---YIITGHAKGDICTWDLRMG--RELESISGHAKEPINDMQ---------------  459 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~---~L~sgs~Dg~I~iWd~~tg--~~~~~l~~h~~~~V~~v~---------------  459 (894)
                      .+...+.||..+|.|+.|-|+.+   +|++|+.|+.|++|.++..  .+++.+.+|.. .+.|+.               
T Consensus        45 ~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~-~~~cv~a~~~~~~~~~ad~~v  123 (764)
T KOG1063|consen   45 LIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCK-ECVCVVARSSVMTCKAADGTV  123 (764)
T ss_pred             eeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcce-eEEEEEeeeeEEEeeccCceE
Confidence            35568899999999999999887   8999999999999999833  33555666543 332221               


Q ss_pred             -----------------------------EcC-CCCEEE-EEeCCCCc--------------------cceEEEEEecCC
Q psy10063        460 -----------------------------FSK-DATMFI-TASHSQAV--------------------EPINDMQFSKDA  488 (894)
Q Consensus       460 -----------------------------~sp-dg~~la-~~~~d~~i--------------------~~V~~l~~spdg  488 (894)
                                                   +.+ .+.+|. .|+.+..+                    ..|.+|+|..-+
T Consensus       124 ~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~  203 (764)
T KOG1063|consen  124 SVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLG  203 (764)
T ss_pred             EEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccC
Confidence                                         111 112222 22211111                    477888887643


Q ss_pred             ---CEEEEEECCCCEEEEEcCCCc---------------------EEEE-----------EeCCCCeeEEEEcCCCCEEE
Q psy10063        489 ---TMFITASKDHTAKLFTTHDRQ---------------------LLKT-----------YTTERPVNSAALSPILPHVV  533 (894)
Q Consensus       489 ---~~L~sgs~Dg~V~iwdl~~~~---------------------~~~~-----------~~~~~~v~~l~~spdg~~l~  533 (894)
                         -+|+++|.|..||||.+.-+.                     ++..           +.|++.|+++.|+|.+..|+
T Consensus       204 ~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LL  283 (764)
T KOG1063|consen  204 GDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLL  283 (764)
T ss_pred             CCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhhe
Confidence               378999999999999764221                     1111           13568999999999999999


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc-------
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL-------  606 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~-------  606 (894)
                      +++.|..+.+|..+...|.|.   -.++-|    .+.|..+..++..|++++..|++-+..|..++|......       
T Consensus       284 SASaDksmiiW~pd~~tGiWv---~~vRlG----e~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~  356 (764)
T KOG1063|consen  284 SASADKSMIIWKPDENTGIWV---DVVRLG----EVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPV  356 (764)
T ss_pred             ecccCcceEEEecCCccceEE---EEEEee----cccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccc
Confidence            999999999999888877552   111111    222444566777777777777777777777777622111       


Q ss_pred             cccCCCceeeeEECcCCcEEEecCC--eEEEEec-------ccCCC--------------CCCCeeeeccccCCCceEEe
Q psy10063        607 DISEGSFTSSSTQQPDGLVYPSQGG--HIHSLSS-------HSTSS--------------TDTGGVFSGSRVDDSGVELT  663 (894)
Q Consensus       607 ~~~~~~~v~~~~~spdg~~l~~~~g--~i~~~~~-------~~~~~--------------~d~~~i~sgs~~~d~~i~l~  663 (894)
                      ...+-..+.++.|.|.|.++.+.+-  ..+.+..       |....              .....+++|.  .++.++++
T Consensus       357 iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgA--dEKVlRvF  434 (764)
T KOG1063|consen  357 ISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGA--DEKVLRVF  434 (764)
T ss_pred             cccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecc--cceeeeee
Confidence            0123345666777777766533221  1111100       01000              1123344444  45555555


Q ss_pred             chhhHHHhh--hcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceee--c
Q psy10063        664 KDEQIEMAR--NRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTW--G  739 (894)
Q Consensus       664 ~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~--~  739 (894)
                      +..+.....  ........+....... ..+..+.++.......      ....|..-++....   .....+..+.  -
T Consensus       435 ~aPk~fv~~l~~i~g~~~~~~~~~p~g-A~VpaLGLSnKa~~~~------e~~~G~~~~~~~et---~~~~~p~~L~ePP  504 (764)
T KOG1063|consen  435 EAPKSFVKSLMAICGKCFKGSDELPDG-ANVPALGLSNKAFFPG------ETNTGGEAAVCAET---PLAAAPCELTEPP  504 (764)
T ss_pred             cCcHHHHHHHHHHhCccccCchhcccc-cccccccccCCCCccc------ccccccccceeeec---ccccCchhccCCC
Confidence            544332211  0000000000000000 0000000000000000      00111110000000   0000000000  0


Q ss_pred             cccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC-----cEEEEEccCCce---eeccccCCCceEeecCC
Q psy10063        740 HIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK-----VSERYRDRKNKA---TAGFLLSCPDFLFDFDT  811 (894)
Q Consensus       740 ~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg-----~I~iwd~~~~~~---~~~~~~~~~~~~fS~dg  811 (894)
                      .++......--.+...+.||.-.|++++.+|++.+||+++...     .|+||......+   +..|...+..++|||||
T Consensus       505 ~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg  584 (764)
T KOG1063|consen  505 TEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDG  584 (764)
T ss_pred             hHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCC
Confidence            0111011111123345779999999999999999999998765     499999776554   55667778899999999


Q ss_pred             CeEEEEecCCCCceeEEEeecCCcce----eeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc--ccccc
Q psy10063        812 TREVTTTSTKVGKFDARFYHLIFEEE----FARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA--YFDYT  882 (894)
Q Consensus       812 ~~l~~as~d~~g~~~I~vwd~~tg~~----l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~--~~~~~  882 (894)
                      ++|++++.|+    .+.||..+....    .+.++.|..-|+++.|+||+++||++|.|++|+||.+...  +.+.+
T Consensus       585 ~~LLsvsRDR----t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~  657 (764)
T KOG1063|consen  585 RYLLSVSRDR----TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISR  657 (764)
T ss_pred             cEEEEeecCc----eEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhh
Confidence            9999999998    689998865422    3447899999999999999999999999999999999887  44444

>KOG0281|consensus

Probab=99.96  E-value=3.4e-29  Score=251.60  Aligned_cols=152  Identities=18%  Similarity=0.248  Sum_probs=131.4

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ....|.|+.+  |...+++|..|.+|+|||..+..+++.+.||.+                         .|.|+.|.  
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtG-------------------------SVLCLqyd--  246 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTG-------------------------SVLCLQYD--  246 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCC-------------------------cEEeeecc--
Confidence            5678999998  456899999999999999999999999999998                         67677664  


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc--
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE--  564 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~--  564 (894)
                      .+.|++|+.|.+|+|||+.+|+++..+.|+ ..|..+.|+.  .++++++.|..              +++||+....  
T Consensus       247 ~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrs--------------iaVWdm~sps~i  310 (499)
T KOG0281|consen  247 ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRS--------------IAVWDMASPTDI  310 (499)
T ss_pred             ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCce--------------eEEEeccCchHH
Confidence            468999999999999999999999988765 8899999984  68999999997              7888877554  


Q ss_pred             -eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        565 -EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       565 -~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                       +.+.|.||...|..+.|+  .++|++++.|.+|++|++.+++
T Consensus       311 t~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~e  351 (499)
T KOG0281|consen  311 TLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCE  351 (499)
T ss_pred             HHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEecccee
Confidence             334678999999999994  5699999999999999997754

>KOG0640|consensus

Probab=99.96  E-value=1e-27  Score=237.94  Aligned_cols=322  Identities=16%  Similarity=0.189  Sum_probs=239.1

Q ss_pred             ceeeeeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----eEEEEecCCCCCCee
Q psy10063        381 DRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----RELESISGHAKEPIN  456 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~  456 (894)
                      ..-+.|.+|-+-+...........+..|++.+++.+|++||.++++|+.|..|+|+|++..    +....+.+...    
T Consensus        84 giDle~dadaq~~s~e~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~q----  159 (430)
T KOG0640|consen   84 GIDLEFDADAQGSSPEPSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQ----  159 (430)
T ss_pred             ceeeeeccccccCCCCCcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcc----
Confidence            3334455555544444444556688999999999999999999999999999999998621    11111111110    


Q ss_pred             EEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE---EEEeCCCCeeEEEEcCCCCEEE
Q psy10063        457 DMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL---KTYTTERPVNSAALSPILPHVV  533 (894)
Q Consensus       457 ~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~---~~~~~~~~v~~l~~spdg~~l~  533 (894)
                             .+.-+.-..-.++..|.++.|+|....|++|+.|++|++||+.+-...   +.|..-.+|.+|.|+|.|.+|+
T Consensus       160 -------a~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefll  232 (430)
T KOG0640|consen  160 -------ARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLL  232 (430)
T ss_pred             -------cCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEE
Confidence                   000000111112238999999999999999999999999999865443   4444568899999999999999


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccceEEEc---cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE  610 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~  610 (894)
                      +|.....              +++||+.+.++...-   .+|.+.|.++.+++.|++.++++.||.|++||--..+.+..
T Consensus       233 vgTdHp~--------------~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t  298 (430)
T KOG0640|consen  233 VGTDHPT--------------LRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRT  298 (430)
T ss_pred             EecCCCc--------------eeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHH
Confidence            9988776              899999988877643   57999999999999999999999999999998533321100


Q ss_pred             CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063        611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD  690 (894)
Q Consensus       611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~  690 (894)
                                                                                                      
T Consensus       299 --------------------------------------------------------------------------------  298 (430)
T KOG0640|consen  299 --------------------------------------------------------------------------------  298 (430)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCC-CCceEEEeeC
Q psy10063        691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGP-VDIGFKMPEP  769 (894)
Q Consensus       691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h-~~~v~~la~s  769 (894)
                                                                                      +-..| ...|.+..|.
T Consensus       299 ----------------------------------------------------------------~~~AH~gsevcSa~Ft  314 (430)
T KOG0640|consen  299 ----------------------------------------------------------------IGNAHGGSEVCSAVFT  314 (430)
T ss_pred             ----------------------------------------------------------------HHhhcCCceeeeEEEc
Confidence                                                                            00112 2346778899


Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeccccCC--------CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec
Q psy10063        770 PKREKLALALADKVSERYRDRKNKATAGFLLSC--------PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI  841 (894)
Q Consensus       770 pdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~--------~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l  841 (894)
                      .+++||++.+.|..+++|.+.+++.+..+....        ...+|.....+++.-.....   .+.-||.+++..+..+
T Consensus       315 kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~---slcsWdaRtadr~~l~  391 (430)
T KOG0640|consen  315 KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASN---SLCSWDARTADRVALL  391 (430)
T ss_pred             cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccC---ceeeccccchhhhhhc
Confidence            999999999999999999999999988765431        23345555555554433222   5889999988777666


Q ss_pred             c-CCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        842 K-GHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       842 ~-gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      . ||.+.|+.+.-||.+.-+++||.|..+|+|--
T Consensus       392 slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  392 SLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             ccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence            5 99999999999999999999999999999964

>KOG0275|consensus

Probab=99.96  E-value=4.3e-29  Score=248.48  Aligned_cols=289  Identities=16%  Similarity=0.197  Sum_probs=227.7

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      .|.++.+-|..|||||+||++|+.||.|.||+..+|+..+.++........  -..               ..|.||.|+
T Consensus       210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fM--Mmd---------------~aVlci~FS  272 (508)
T KOG0275|consen  210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFM--MMD---------------DAVLCISFS  272 (508)
T ss_pred             cccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhccee--ecc---------------cceEEEeec
Confidence            456788999999999999999999999999999999987776643321110  000               179999999


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      .|.+.|++|+.||.|+||.+++|+|++.|.  |...|.|+.|+.|+..|++++.|..              +|+.-+++|
T Consensus       273 RDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~t--------------vRiHGlKSG  338 (508)
T KOG0275|consen  273 RDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQT--------------VRIHGLKSG  338 (508)
T ss_pred             ccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccce--------------EEEeccccc
Confidence            999999999999999999999999999998  5689999999999999999999986              899999999


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      ++++.++||...|....|.+||.+|++++.||.|+||+..+.+.+..-        .|-+.                   
T Consensus       339 K~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tf--------k~~~~-------------------  391 (508)
T KOG0275|consen  339 KCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTF--------KPLGT-------------------  391 (508)
T ss_pred             hhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhc--------cCCCC-------------------
Confidence            999999999999999999999999999999999999999876543210        00000                   


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                                                                                      
T Consensus       392 --------------------------------------------------------------------------------  391 (508)
T KOG0275|consen  392 --------------------------------------------------------------------------------  391 (508)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEEEEccCCceeeccccC-
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSERYRDRKNKATAGFLLS-  801 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~-  801 (894)
                                                          .-.|..+..-| .-..++++-...+|+|..+. ++.++.+..+ 
T Consensus       392 ------------------------------------d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGk  434 (508)
T KOG0275|consen  392 ------------------------------------DYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGK  434 (508)
T ss_pred             ------------------------------------cccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCC
Confidence                                                00011111111 12334444455555555432 2333333222 


Q ss_pred             -----CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        802 -----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       802 -----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                           .-..++||.|.++++.+.|+    -++.|.+.+|++-+.+..|...|-.++-+|....||+-++||.+++|.
T Consensus       435 REgGdFi~~~lSpkGewiYcigED~----vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  435 REGGDFINAILSPKGEWIYCIGEDG----VLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ccCCceEEEEecCCCcEEEEEccCc----EEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence                 11456899999999999998    489999999999999999999999999999999999999999999995

>KOG0284|consensus

Probab=99.96  E-value=8.8e-29  Score=254.34  Aligned_cols=264  Identities=18%  Similarity=0.241  Sum_probs=210.5

Q ss_pred             eeeeeccCccEEEecCC-CeEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC
Q psy10063        382 RLNSMSPAARKLATNAE-PVVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH  450 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~-~~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h  450 (894)
                      ..+.|.|+||.|+.++. +.+.          ..++.|...|+++.|+++|.++++|+.+|.|++|+.. ...++.++.|
T Consensus       100 ~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn-mnnVk~~~ah  178 (464)
T KOG0284|consen  100 NVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN-MNNVKIIQAH  178 (464)
T ss_pred             eeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc-hhhhHHhhHh
Confidence            45679999999987754 2333          2677899999999999999999999999999999976 4446677777


Q ss_pred             CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCC
Q psy10063        451 AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPIL  529 (894)
Q Consensus       451 ~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg  529 (894)
                      ...                        .|++++|+|....|++|+.||.|+|||....+..+.+.+ +-.|.+++|+|.-
T Consensus       179 h~e------------------------aIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~k  234 (464)
T KOG0284|consen  179 HAE------------------------AIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTK  234 (464)
T ss_pred             hhh------------------------hhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCcc
Confidence            631                        788888888888899999999999999998888777775 5789999999999


Q ss_pred             CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc
Q psy10063        530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       530 ~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                      ..|++++.|..              |++||.++|.++..+.+|+..|..+.|.+++.+|+++|.|..+++||++..+++.
T Consensus       235 gLiasgskDnl--------------VKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~  300 (464)
T KOG0284|consen  235 GLIASGSKDNL--------------VKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELF  300 (464)
T ss_pred             ceeEEccCCce--------------eEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHH
Confidence            99999999884              9999999999999999999999999999999999999999999999998655442


Q ss_pred             ----CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEE
Q psy10063        610 ----EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLH  685 (894)
Q Consensus       610 ----~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~  685 (894)
                          +...+.++.|+|-                      ....+.+|+  .|+.+.+|....                  
T Consensus       301 ~~r~Hkkdv~~~~WhP~----------------------~~~lftsgg--~Dgsvvh~~v~~------------------  338 (464)
T KOG0284|consen  301 TYRGHKKDVTSLTWHPL----------------------NESLFTSGG--SDGSVVHWVVGL------------------  338 (464)
T ss_pred             Hhhcchhhheeeccccc----------------------cccceeecc--CCCceEEEeccc------------------
Confidence                3444445555442                      233344444  455555543110                  


Q ss_pred             eeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEE
Q psy10063        686 VNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFK  765 (894)
Q Consensus       686 ~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~  765 (894)
                                                                                     ......+-.+|...|++
T Consensus       339 ---------------------------------------------------------------~~p~~~i~~AHd~~iws  355 (464)
T KOG0284|consen  339 ---------------------------------------------------------------EEPLGEIPPAHDGEIWS  355 (464)
T ss_pred             ---------------------------------------------------------------cccccCCCcccccceee
Confidence                                                                           00111234578899999


Q ss_pred             EeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        766 MPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       766 la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                      |+|+|=|.+|++|+.|..+++|..
T Consensus       356 l~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  356 LAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             eeccccceeEeecCCCcceeeecc
Confidence            999999999999999999999963

>KOG0285|consensus

Probab=99.96  E-value=4.8e-28  Score=244.66  Aligned_cols=242  Identities=18%  Similarity=0.243  Sum_probs=214.2

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      +.|.||++.|..++|++|+.|++|+|||+.+|++...+.+ ...|..+++|+...||++++.++.              |
T Consensus       152 gWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~--------------V  217 (460)
T KOG0285|consen  152 GWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQ--------------V  217 (460)
T ss_pred             ceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCe--------------e
Confidence            3899999999999999999999999999999999999984 588999999999999999999997              9


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +.||++..+.|+.+.||...|+||+.+|--+.|++|+.|..+||||+++...+                           
T Consensus       218 KCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V---------------------------  270 (460)
T KOG0285|consen  218 KCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV---------------------------  270 (460)
T ss_pred             EEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE---------------------------
Confidence            99999999999999999999999999999999999999999999999764211                           


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       271 --------------------------------------------------------------------------------  270 (460)
T KOG0285|consen  271 --------------------------------------------------------------------------------  270 (460)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                            .++.||...|..+.+-|-...+++|+.|++|++||+..++..
T Consensus       271 --------------------------------------~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~  312 (460)
T KOG0285|consen  271 --------------------------------------HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTM  312 (460)
T ss_pred             --------------------------------------EEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCcee
Confidence                                                  145678888888888888889999999999999999988774


Q ss_pred             e---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063        796 A---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLH  872 (894)
Q Consensus       796 ~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vW  872 (894)
                      .   .+...+.++++.|....+++++.|.     |+-|++..|+.+..+.+|..-|.+|+...|| +|++|++.|.|.+|
T Consensus       313 ~tlt~hkksvral~lhP~e~~fASas~dn-----ik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fw  386 (460)
T KOG0285|consen  313 ITLTHHKKSVRALCLHPKENLFASASPDN-----IKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFW  386 (460)
T ss_pred             EeeecccceeeEEecCCchhhhhccCCcc-----ceeccCCccchhhccccccceeeeeeeccCc-eEEEcCCceEEEEE
Confidence            4   4445566788888888888888874     9999999999999999999999999998876 68999999999999


Q ss_pred             ecCcccccccc
Q psy10063        873 TFDQAYFDYTF  883 (894)
Q Consensus       873 dl~~~~~~~~~  883 (894)
                      |.+.+.....+
T Consensus       387 dwksg~nyQ~~  397 (460)
T KOG0285|consen  387 DWKSGHNYQRG  397 (460)
T ss_pred             ecCcCcccccc
Confidence            99988654443

>KOG0316|consensus

Probab=99.96  E-value=1.9e-27  Score=227.97  Aligned_cols=248  Identities=19%  Similarity=0.227  Sum_probs=211.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|..+.|.-||++.++|+.|++|++|+...|.+++++.+ +..|..++.+.|...|+++++|+.              +.
T Consensus        19 aV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~--------------v~   84 (307)
T KOG0316|consen   19 AVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA--------------VQ   84 (307)
T ss_pred             ceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce--------------EE
Confidence            788999999999999999999999999999999999986 578999999999999999999997              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +||+.+|+.++++.+|.+.|..++|..+...+++|+.|..|++||-+.....            |               
T Consensus        85 vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~e------------P---------------  137 (307)
T KOG0316|consen   85 VWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFE------------P---------------  137 (307)
T ss_pred             EEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCC------------c---------------
Confidence            9999999999999999999999999999999999999999999998653210            0               


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (307)
T KOG0316|consen  138 --------------------------------------------------------------------------------  137 (307)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA  796 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~  796 (894)
                                                          ++++....+.|.+|.+.  +..|+.|+.||.+|.||++.+.+..
T Consensus       138 ------------------------------------iQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~s  179 (307)
T KOG0316|consen  138 ------------------------------------IQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSS  179 (307)
T ss_pred             ------------------------------------cchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeeh
Confidence                                                00111122334454443  5688999999999999999999876


Q ss_pred             ccc-cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCee--EEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        797 GFL-LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN--SLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       797 ~~~-~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~--~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      .+. .++.+++|++||+.+++++.+.    .|++.|-.+|+++..++||...-.  .++|.....++++|++||.|++||
T Consensus       180 Dy~g~pit~vs~s~d~nc~La~~l~s----tlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wd  255 (307)
T KOG0316|consen  180 DYFGHPITSVSFSKDGNCSLASSLDS----TLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWD  255 (307)
T ss_pred             hhcCCcceeEEecCCCCEEEEeeccc----eeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEE
Confidence            554 5678999999999999999887    699999999999999999986543  456777778999999999999999


Q ss_pred             cCccccccccccCcc
Q psy10063        874 FDQAYFDYTFDISEE  888 (894)
Q Consensus       874 l~~~~~~~~~~~~~~  888 (894)
                      +....++.++.....
T Consensus       256 Lvd~~~~sk~~~~~~  270 (307)
T KOG0316|consen  256 LVDETQISKLSVVST  270 (307)
T ss_pred             eccceeeeeeccCCc
Confidence            999998888876543

>KOG0265|consensus

Probab=99.96  E-value=3.2e-27  Score=234.51  Aligned_cols=184  Identities=16%  Similarity=0.260  Sum_probs=165.2

Q ss_pred             eeeeeccCccEEEecCCCeEEE------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063        382 RLNSMSPAARKLATNAEPVVKM------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG  449 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~~~~~------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~  449 (894)
                      ....|.|||.+|+.++.+...+            .+++|++.|..|.|.+|+..|++++.|.+|+.||+++|++++++++
T Consensus        51 ~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~  130 (338)
T KOG0265|consen   51 YTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKG  130 (338)
T ss_pred             EEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhcc
Confidence            4458999999999988764433            6779999999999999999999999999999999999999999999


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC
Q psy10063        450 HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPI  528 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spd  528 (894)
                      |.+                         .|.++.-+. .-.+|.+++.||+++|||+++..+++.+...-++.++.|..+
T Consensus       131 h~~-------------------------~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~  185 (338)
T KOG0265|consen  131 HTS-------------------------FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDT  185 (338)
T ss_pred             ccc-------------------------eeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccc
Confidence            998                         444444222 234678899999999999999999999998999999999999


Q ss_pred             CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        529 LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       529 g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +..+++|+-++.              |++||++....++.+.||...|..|..+++|.+|.+-+.|..|++||++.
T Consensus       186 s~qv~sggIdn~--------------ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp  247 (338)
T KOG0265|consen  186 SDQVISGGIDND--------------IKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP  247 (338)
T ss_pred             ccceeeccccCc--------------eeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence            999999999986              89999999999999999999999999999999999999999999999965

>KOG2048|consensus

Probab=99.96  E-value=1.6e-25  Score=244.07  Aligned_cols=428  Identities=15%  Similarity=0.160  Sum_probs=285.9

Q ss_pred             CCccceeeeeccCccEEEecCC-Ce-----------EEEEEecCC-CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAE-PV-----------VKMQVTDQS-AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE  443 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~-~~-----------~~~~l~~H~-~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~  443 (894)
                      ..+....++|+.+.+.||.+.. +.           +...+.||. +.|-+|+|+ +|.+|++.+.+|.|.-||+.+++.
T Consensus        24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~  102 (691)
T KOG2048|consen   24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQ  102 (691)
T ss_pred             eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCce
Confidence            3345566778887777776543 22           333555554 789999999 566888988999999999999999


Q ss_pred             EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------------cceEEEEEecCCCEEEEEECCCCEEEE
Q psy10063        444 LESISGHAKEPINDMQFSKDATMFITASHSQAV--------------------EPINDMQFSKDATMFITASKDHTAKLF  503 (894)
Q Consensus       444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------------------~~V~~l~~spdg~~L~sgs~Dg~V~iw  503 (894)
                      ++.+....+ .|++++.+|.+..+++|++||.+                    ++|.+|+|.+++..|+.|+.||.|++|
T Consensus       103 ~~~~d~~gg-~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriw  181 (691)
T KOG2048|consen  103 KYNIDSNGG-AIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIW  181 (691)
T ss_pred             eEEecCCCc-ceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEE
Confidence            999998877 99999999999999999999966                    589999999999999999999999999


Q ss_pred             EcCCCcEEEEEe-----CC----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC
Q psy10063        504 TTHDRQLLKTYT-----TE----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  574 (894)
Q Consensus       504 dl~~~~~~~~~~-----~~----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~  574 (894)
                      |+..+..++.+.     ..    --|+++.|-.+ ..|++|...|.              |.+||...+.+++.+..|.+
T Consensus       182 d~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~--------------V~FWd~~~gTLiqS~~~h~a  246 (691)
T KOG2048|consen  182 DVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGT--------------VTFWDSIFGTLIQSHSCHDA  246 (691)
T ss_pred             EcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCce--------------EEEEcccCcchhhhhhhhhc
Confidence            999998877332     11    13677777755 46788888886              99999999999999999999


Q ss_pred             CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc--------cCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCC
Q psy10063        575 PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI--------SEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDT  646 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~--------~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~  646 (894)
                      .|.+|+..+++.+|++++.|+.|..|........        .+.+.+.+++..+.                        
T Consensus       247 dVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~------------------------  302 (691)
T KOG2048|consen  247 DVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN------------------------  302 (691)
T ss_pred             ceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc------------------------
Confidence            9999999999999999999999999988765421        11222222222222                        


Q ss_pred             CeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCc
Q psy10063        647 GGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDE  726 (894)
Q Consensus       647 ~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~  726 (894)
                       .+++|+  .|..+.+-..+.......++.          ..+.....+...+..++...    .+.+.......+..- 
T Consensus       303 -~l~sgG--~d~~l~i~~s~~~~~~~h~~~----------~~~p~~~~v~~a~~~~L~~~----w~~h~v~lwrlGS~~-  364 (691)
T KOG2048|consen  303 -ALISGG--RDFTLAICSSREFKNMDHRQK----------NLFPASDRVSVAPENRLLVL----WKAHGVDLWRLGSVI-  364 (691)
T ss_pred             -eEEecc--eeeEEEEccccccCchhhhcc----------ccccccceeecCccceEEEE----eccccccceeccCcc-
Confidence             344444  344444333222111110000          00011111111111111100    001111111111000 


Q ss_pred             cccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee--------cc
Q psy10063        727 QQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA--------GF  798 (894)
Q Consensus       727 ~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~--------~~  798 (894)
                                ..|+.      ...+.+++.......|.|.+.||+|++|+.+.-.. ++||++.....+.        ..
T Consensus       365 ----------~~g~~------~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~~-~~iy~L~~~~~vk~~~v~~~~~~  427 (691)
T KOG2048|consen  365 ----------LQGEY------NYIHLLKLFTKEKENISCAAISPDGNLIAISTVSR-TKIYRLQPDPNVKVINVDDVPLA  427 (691)
T ss_pred             ----------ccccc------ChhhheeeecCCccceeeeccCCCCCEEEEeeccc-eEEEEeccCcceeEEEeccchhh
Confidence                      00000      01112223334456788999999999999876544 7888876533221        22


Q ss_pred             ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc--ceeeecc--CCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE--EEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg--~~l~~l~--gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      ......+.|+.|+..++.++-+..   ++.+++++..  +.+..+.  +....|..|..|+||+|||..+.+|.|.+|++
T Consensus       428 ~~~a~~i~ftid~~k~~~~s~~~~---~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl  504 (691)
T KOG2048|consen  428 LLDASAISFTIDKNKLFLVSKNIF---SLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNL  504 (691)
T ss_pred             hccceeeEEEecCceEEEEecccc---eeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEc
Confidence            235567789999999988884432   5777777654  3333332  35578999999999999999999999999999


Q ss_pred             Ccccccccc
Q psy10063        875 DQAYFDYTF  883 (894)
Q Consensus       875 ~~~~~~~~~  883 (894)
                      +..+.....
T Consensus       505 ~~~~~~~l~  513 (691)
T KOG2048|consen  505 ETLESHLLK  513 (691)
T ss_pred             ccceeecch
Confidence            988765443

>KOG0645|consensus

Probab=99.96  E-value=5.1e-26  Score=222.90  Aligned_cols=191  Identities=16%  Similarity=0.226  Sum_probs=156.5

Q ss_pred             cceeeeeccC-ccEEEecCCCe-EEE--------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--
Q psy10063        380 VDRLNSMSPA-ARKLATNAEPV-VKM--------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--  441 (894)
Q Consensus       380 ~~~~~~~s~d-g~~l~~~~~~~-~~~--------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--  441 (894)
                      .....++.|- |.+|+.++.+. +++              .-.+|+..|++++|+|.|++|++|+.|.++.||.-..+  
T Consensus        16 r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~ef   95 (312)
T KOG0645|consen   16 RVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEF   95 (312)
T ss_pred             cEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCce
Confidence            4456677777 77787766542 222              11359999999999999999999999999999987654  


Q ss_pred             eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCC---cEEEEEe-CC
Q psy10063        442 RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDR---QLLKTYT-TE  517 (894)
Q Consensus       442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~-~~  517 (894)
                      +++..|+||..                         .|.|++|+++|.+||+|++|+.|-||.+..+   +++..+. |.
T Consensus        96 ecv~~lEGHEn-------------------------EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Ht  150 (312)
T KOG0645|consen   96 ECVATLEGHEN-------------------------EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHT  150 (312)
T ss_pred             eEEeeeecccc-------------------------ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccc
Confidence            67899999998                         8999999999999999999999999998754   4555665 45


Q ss_pred             CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063        518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFL  597 (894)
Q Consensus       518 ~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I  597 (894)
                      ..|..+.|+|...+|++++.|..+++|....           -...++++.|.+|...|++++|++.|..|++++.|+.|
T Consensus       151 qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~-----------dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv  219 (312)
T KOG0645|consen  151 QDVKHVIWHPTEDLLFSCSYDNTIKVYRDED-----------DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTV  219 (312)
T ss_pred             ccccEEEEcCCcceeEEeccCCeEEEEeecC-----------CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcce
Confidence            8899999999999999999999854432221           12346788999999999999999999999999999999


Q ss_pred             EEEECCCCc
Q psy10063        598 ISNTLSNGL  606 (894)
Q Consensus       598 ~vwdl~~~~  606 (894)
                      +||.+....
T Consensus       220 ~Iw~~~~~~  228 (312)
T KOG0645|consen  220 SIWRLYTDL  228 (312)
T ss_pred             EeeeeccCc
Confidence            999865443

>KOG0276|consensus

Probab=99.96  E-value=5.4e-26  Score=244.41  Aligned_cols=423  Identities=13%  Similarity=0.160  Sum_probs=277.5

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------  476 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------  476 (894)
                      ..+..|+.+|.++.|+|-..+++.+-..|.|.||+.++...++.|....- +|+++.|-+...++++|++|..|      
T Consensus         7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~-PvRa~kfiaRknWiv~GsDD~~IrVfnyn   85 (794)
T KOG0276|consen    7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEV-PVRAAKFIARKNWIVTGSDDMQIRVFNYN   85 (794)
T ss_pred             hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeeccc-chhhheeeeccceEEEecCCceEEEEecc
Confidence            34556999999999999999999999999999999999999999998877 99999999999999999999988      


Q ss_pred             ------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC-CcEEEEEeCC-CCeeEEEEcCC-CCEEEEEECCCCe
Q psy10063        477 ------------EPINDMQFSKDATMFITASKDHTAKLFTTHD-RQLLKTYTTE-RPVNSAALSPI-LPHVVLGGGQEAR  541 (894)
Q Consensus       477 ------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-~~~~~~~~~~-~~v~~l~~spd-g~~l~~~~~~~~~  541 (894)
                                  ..|+||+.+|...+++++|.|-.|++||.+. ..+.+.|+++ ..|.+++|.|. ...+++++-|+. 
T Consensus        86 t~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrT-  164 (794)
T KOG0276|consen   86 TGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRT-  164 (794)
T ss_pred             cceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeecccc-
Confidence                        5899999999999999999999999999985 4678888864 78999999995 468899999997 


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCC--CEEEEEeCCCcEEEEECCCCcccc----CCCcee
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG--KSYASGGEDGFLISNTLSNGLDIS----EGSFTS  615 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg--~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~  615 (894)
                                   |++|.+.+..+...|.||...|.|+.|-+.|  .+|++|+.|..|+|||+++...++    +...+.
T Consensus       165 -------------VKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs  231 (794)
T KOG0276|consen  165 -------------VKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVS  231 (794)
T ss_pred             -------------EEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccce
Confidence                         8999999999999999999999999998754  599999999999999999887553    222333


Q ss_pred             eeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCccee
Q psy10063        616 SSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  695 (894)
Q Consensus       616 ~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  695 (894)
                      .+.|.|                       .-..+++|+  .|+.+++|......+......  .-++...+........+
T Consensus       232 ~v~fhp-----------------------~lpiiisgs--EDGTvriWhs~Ty~lE~tLn~--gleRvW~I~~~k~~~~i  284 (794)
T KOG0276|consen  232 FVFFHP-----------------------ELPIIISGS--EDGTVRIWNSKTYKLEKTLNY--GLERVWCIAAHKGDGKI  284 (794)
T ss_pred             EEEecC-----------------------CCcEEEEec--CCccEEEecCcceehhhhhhc--CCceEEEEeecCCCCeE
Confidence            333333                       233566666  788888888766554331111  11111222211222222


Q ss_pred             EeccCcceeEE-----eeeEEEcCCCCEEEecccCccccccCCcceee-ccccCcccccCCCCcceecCCCCceEEEeeC
Q psy10063        696 ELTKDEQIEMA-----RNRMSINHSGTRLHVNPFDEQQSVDASPLMTW-GHIEGTPFKLDGSDTPILAGPVDIGFKMPEP  769 (894)
Q Consensus       696 ~~s~~~~~~~~-----~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~-~~~~g~~~~~dg~~~~~~~~h~~~v~~la~s  769 (894)
                      .+.-++.....     ...++....|+++-....... .+....+..- ...+|..+.+.-+.+....-+   --.++.+
T Consensus       285 ~vG~Deg~i~v~lgreeP~vsMd~~gKIiwa~~~ei~-~~~~ks~~~~~ev~DgErL~LsvKeLgs~eiy---Pq~L~hs  360 (794)
T KOG0276|consen  285 AVGFDEGSVTVKLGREEPAVSMDSNGKIIWAVHSEIQ-AVNLKSVGAQKEVTDGERLPLSVKELGSVEIY---PQTLAHS  360 (794)
T ss_pred             EEeccCCcEEEEccCCCCceeecCCccEEEEcCceee-eeeceeccCcccccCCccccchhhhccccccc---hHHhccC
Confidence            22211111100     011233333332222111000 0000000000 112222222221211111111   1256778


Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCee
Q psy10063        770 PKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN  849 (894)
Q Consensus       770 pdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~  849 (894)
                      |.|++++++ .||.-+||-..-.  .-+........+|+.|....++--..+    .|+++  +.++....++....   
T Consensus       361 PNGrfV~Vc-gdGEyiIyTala~--RnK~fG~~~eFvw~~dsne~avRes~~----~vki~--knfke~ksi~~~~~---  428 (794)
T KOG0276|consen  361 PNGRFVVVC-GDGEYIIYTALAL--RNKAFGSGLEFVWAADSNEFAVRESNG----NVKIF--KNFKEHKSIRPDMS---  428 (794)
T ss_pred             CCCcEEEEe-cCccEEEEEeeeh--hhcccccceeEEEcCCCCeEEEEecCC----ceEEE--ecceeccccccccc---
Confidence            999877765 6677777753211  112234455678899977766654444    37777  55666655543221   


Q ss_pred             EEEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        850 SLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                       +.+--.|.+|...+ ++.+++||.+.+.++.+++.
T Consensus       429 -~e~i~gg~Llg~~s-s~~~~fydW~~~~lVrrI~v  462 (794)
T KOG0276|consen  429 -AEGIFGGPLLGVRS-SDFLCFYDWESGELVRRIEV  462 (794)
T ss_pred             -eeeecCCceEEEEe-CCeEEEEEcccceEEEEEee
Confidence             22222355555555 55699999999999998875

>KOG0266|consensus

Probab=99.95  E-value=6.3e-27  Score=267.79  Aligned_cols=247  Identities=21%  Similarity=0.238  Sum_probs=213.5

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc--EEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ--LLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~--~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      ..|.++.|+++|++|++++.|+.|++|++..++  +++.+ .|...|.+++|+|+|++|+.++.|+.             
T Consensus       160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~t-------------  226 (456)
T KOG0266|consen  160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKT-------------  226 (456)
T ss_pred             CceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCce-------------
Confidence            378999999999999999999999999997777  66665 35688999999999999999999997             


Q ss_pred             eEEEEec-cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063        554 DARFYHL-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       554 ~v~vwd~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                       ||+||+ ..+..++.+++|...|.+++|+|+|++|++|+.|+.|+|||++.++.                         
T Consensus       227 -iriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~-------------------------  280 (456)
T KOG0266|consen  227 -LRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGEC-------------------------  280 (456)
T ss_pred             -EEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeE-------------------------
Confidence             899999 55689999999999999999999999999999999999999865321                         


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                                                                                                      
T Consensus       281 --------------------------------------------------------------------------------  280 (456)
T KOG0266|consen  281 --------------------------------------------------------------------------------  280 (456)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN  792 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~  792 (894)
                                                              ...+.+|.+.|.+++|++++.+|++++.|+.|+|||+..+
T Consensus       281 ----------------------------------------~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~  320 (456)
T KOG0266|consen  281 ----------------------------------------VRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETG  320 (456)
T ss_pred             ----------------------------------------EEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCC
Confidence                                                    1245678889999999999999999999999999999999


Q ss_pred             ce--ee---cccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCe---eEEEEeeCCcEEEE
Q psy10063        793 KA--TA---GFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI---NSLAFHPDGKSYAS  862 (894)
Q Consensus       793 ~~--~~---~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V---~~l~fSpdg~~LaS  862 (894)
                      +.  +.   ....  ....++|++++.+++++..++    .|++||+..++++..+.+|...+   .+..++++++++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~----~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s  396 (456)
T KOG0266|consen  321 SKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDR----TLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS  396 (456)
T ss_pred             ceeeeecccCCCCCCceeEEEECCCCcEEEEecCCC----eEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE
Confidence            83  22   2222  245678999999999999998    59999999999999999998753   34456789999999


Q ss_pred             ecCCCcEEEEecCccccccccccC
Q psy10063        863 GGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       863 ~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      |+.|+.|++|++..+..+..++..
T Consensus       397 g~~d~~v~~~~~~s~~~~~~l~~h  420 (456)
T KOG0266|consen  397 GSEDGSVYVWDSSSGGILQRLEGH  420 (456)
T ss_pred             EeCCceEEEEeCCccchhhhhcCC
Confidence            999999999999988777776655

>KOG2096|consensus

Probab=99.95  E-value=1.4e-26  Score=230.86  Aligned_cols=192  Identities=18%  Similarity=0.186  Sum_probs=147.9

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE--EEEec--CCCCCCeeEEEEcCCCCEEEEEeCCCCc--
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE--LESIS--GHAKEPINDMQFSKDATMFITASHSQAV--  476 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~--~h~~~~V~~v~~spdg~~la~~~~d~~i--  476 (894)
                      -.|+||.+.|++|+|+.||++|++++.|+.|+||+++.-..  .+.++  ...+ -...++|+||.+.+++....|.-  
T Consensus        80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d-hpT~V~FapDc~s~vv~~~~g~~l~  158 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD-HPTRVVFAPDCKSVVVSVKRGNKLC  158 (420)
T ss_pred             hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCC-CceEEEECCCcceEEEEEccCCEEE
Confidence            36889999999999999999999999999999999976321  11111  1112 45789999999888877654432  


Q ss_pred             -----------------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEc
Q psy10063        477 -----------------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALS  526 (894)
Q Consensus       477 -----------------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~s  526 (894)
                                                   -.|..+.....+++|++++.|..|.||+++ |+.+..+.. ...-+..+.|
T Consensus       159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavS  237 (420)
T KOG2096|consen  159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVS  237 (420)
T ss_pred             EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeC
Confidence                                         245556666678899999999999999999 999988876 4667888999


Q ss_pred             CCCCEEEEEECCCCeEEEecc-CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        527 PILPHVVLGGGQEAREVTTTS-TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       527 pdg~~l~~~~~~~~~~v~~~~-~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      |+|++|++++..-.+.||..- .+.|.       ++.-+.+..|+||+..|..++|+++.+.+++.+.||.++|||.+
T Consensus       238 P~GRFia~~gFTpDVkVwE~~f~kdG~-------fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd  308 (420)
T KOG2096|consen  238 PDGRFIAVSGFTPDVKVWEPIFTKDGT-------FQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD  308 (420)
T ss_pred             CCCcEEEEecCCCCceEEEEEeccCcc-------hhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence            999999999988764444321 00000       11223456789999999999999999999999999999999985

>KOG1407|consensus

Probab=99.95  E-value=2.4e-26  Score=223.86  Aligned_cols=283  Identities=13%  Similarity=0.175  Sum_probs=229.8

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe--cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI--SGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l--~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ..+++|.+.|.+|+|.-+|.+|++|+.|+.++||.++.++.++.+  ++|.+                         .|.
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~-------------------------svd   68 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTD-------------------------SVD   68 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCc-------------------------chh
Confidence            467799999999999999999999999999999999988665544  46665                         566


Q ss_pred             EEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        481 DMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      .++|+| ...+|++++.|+.|++||++.+++...+...+.-.-+.|+|+|.+++++..++.              |.+.|
T Consensus        69 ql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~--------------it~id  134 (313)
T KOG1407|consen   69 QLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDR--------------ITFID  134 (313)
T ss_pred             hheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCccc--------------EEEEE
Confidence            666666 567899999999999999999999999998877788999999999999999986              77777


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      .+..+.+...+ ..-.+.-+.|+-++.+++....-|.|.|..+...+                                 
T Consensus       135 ~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLk---------------------------------  180 (313)
T KOG1407|consen  135 ARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLK---------------------------------  180 (313)
T ss_pred             ecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEEEEeccccc---------------------------------
Confidence            77666555442 34467788888777777766666777776543211                                 


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (313)
T KOG1407|consen  181 --------------------------------------------------------------------------------  180 (313)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---  796 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---  796 (894)
                                                      .+.-+..|.....||.|+|+|+|||+|+.|..+.|||+...-+++   
T Consensus       181 --------------------------------pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~is  228 (313)
T KOG1407|consen  181 --------------------------------PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCIS  228 (313)
T ss_pred             --------------------------------cccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeec
Confidence                                            011245577788999999999999999999999999998876644   


Q ss_pred             ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC---------C
Q psy10063        797 GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED---------G  867 (894)
Q Consensus       797 ~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D---------g  867 (894)
                      ++..++..+.||.||++|++++.|.    -|-|-++++|..+..+. |.++-..|+|+|...+||-+++|         |
T Consensus       229 RldwpVRTlSFS~dg~~lASaSEDh----~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag  303 (313)
T KOG1407|consen  229 RLDWPVRTLSFSHDGRMLASASEDH----FIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAG  303 (313)
T ss_pred             cccCceEEEEeccCcceeeccCccc----eEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecCCCCccccccc
Confidence            5556778889999999999999997    48899999999888775 77889999999999999987765         5


Q ss_pred             cEEEEecC
Q psy10063        868 FVRLHTFD  875 (894)
Q Consensus       868 ~V~vWdl~  875 (894)
                      .|+||-+.
T Consensus       304 ~vKiFG~~  311 (313)
T KOG1407|consen  304 TVKIFGLS  311 (313)
T ss_pred             eeEEecCC
Confidence            66666554

>KOG0305|consensus

Probab=99.95  E-value=3.3e-26  Score=250.94  Aligned_cols=275  Identities=16%  Similarity=0.207  Sum_probs=230.2

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE
Q psy10063        413 TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI  492 (894)
Q Consensus       413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~  492 (894)
                      .-++|+. ...|+.|. ...|++|+..+++.......+..                         .|+++.|+++|.+|+
T Consensus       181 nlldWss-~n~laVal-g~~vylW~~~s~~v~~l~~~~~~-------------------------~vtSv~ws~~G~~La  233 (484)
T KOG0305|consen  181 NLLDWSS-ANVLAVAL-GQSVYLWSASSGSVTELCSFGEE-------------------------LVTSVKWSPDGSHLA  233 (484)
T ss_pred             hHhhccc-CCeEEEEe-cceEEEEecCCCceEEeEecCCC-------------------------ceEEEEECCCCCEEE
Confidence            3467773 44677775 34799999999986666555444                         799999999999999


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE-c
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR-I  569 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~-l  569 (894)
                      +|..+|.|.|||....+.+..+.+  ...|.+++|.  +..|.+|+.++.              |..+|++..+.+.. +
T Consensus       234 vG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~--------------I~~~dvR~~~~~~~~~  297 (484)
T KOG0305|consen  234 VGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGK--------------ILNHDVRISQHVVSTL  297 (484)
T ss_pred             EeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCc--------------EEEEEEecchhhhhhh
Confidence            999999999999999988888775  5889999999  677888888886              77788887766655 8


Q ss_pred             cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCee
Q psy10063        570 KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGV  649 (894)
Q Consensus       570 ~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i  649 (894)
                      .+|...|..++|++|+.+|++|+.|+.+.|||....+.                                          
T Consensus       298 ~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p------------------------------------------  335 (484)
T KOG0305|consen  298 QGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEP------------------------------------------  335 (484)
T ss_pred             hcccceeeeeEECCCCCeeccCCCccceEeccCCCccc------------------------------------------
Confidence            89999999999999999999999999999999732210                                          


Q ss_pred             eeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcccc
Q psy10063        650 FSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS  729 (894)
Q Consensus       650 ~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~  729 (894)
                                                                                                      
T Consensus       336 --------------------------------------------------------------------------------  335 (484)
T KOG0305|consen  336 --------------------------------------------------------------------------------  335 (484)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEe--cCCCcEEEEEccCCceeeccccC--CCc
Q psy10063        730 VDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALA--LADKVSERYRDRKNKATAGFLLS--CPD  804 (894)
Q Consensus       730 ~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latg--s~Dg~I~iwd~~~~~~~~~~~~~--~~~  804 (894)
                                             ...+..|...|..|+|+|- ..+||+|  +.|+.|++|+...++.+..+..+  +..
T Consensus       336 -----------------------~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcs  392 (484)
T KOG0305|consen  336 -----------------------KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCS  392 (484)
T ss_pred             -----------------------cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceee
Confidence                                   0123457788899999996 6778875  56999999999999888777654  457


Q ss_pred             eEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        805 FLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       805 ~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      ++|++..+.++++.+....  +|.||++.+.+++..+.+|...|..|+++|||..|++|+.|..|++|++-..
T Consensus       393 L~Wsk~~kEi~sthG~s~n--~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  393 LIWSKKYKELLSTHGYSEN--QITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEEcCCCCEEEEecCCCCC--cEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            8899999999999887654  6999999999999999999999999999999999999999999999998664

>KOG0296|consensus

Probab=99.95  E-value=2.9e-25  Score=225.88  Aligned_cols=316  Identities=14%  Similarity=0.162  Sum_probs=231.3

Q ss_pred             cceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063        380 VDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS  448 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~  448 (894)
                      ....++.+|+..+++.++++           .+...+.+|++.|.|+.|+.||.+||+|+.+|.|+||+..+|.....+.
T Consensus        66 svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~  145 (399)
T KOG0296|consen   66 SVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD  145 (399)
T ss_pred             ceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee
Confidence            33445667777777766653           2444788999999999999999999999999999999999999888876


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcC
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSP  527 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~sp  527 (894)
                      ..-.                         .|.-|.|+|.+..|+.|+.||.|.+|.+.++...+.|.+ ..++.+=.|.|
T Consensus       146 ~e~~-------------------------dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p  200 (399)
T KOG0296|consen  146 QEVE-------------------------DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP  200 (399)
T ss_pred             cccC-------------------------ceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC
Confidence            4333                         577788999999999999999999999999888888876 57899999999


Q ss_pred             CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC-CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        528 ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       528 dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h-~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +|++++.+..++.              |++|+.++++++.++.+. .....++.+...+..++.|+.++.+++-....++
T Consensus       201 dGKr~~tgy~dgt--------------i~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgK  266 (399)
T KOG0296|consen  201 DGKRILTGYDDGT--------------IIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGK  266 (399)
T ss_pred             CCceEEEEecCce--------------EEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccce
Confidence            9999999999997              899999999999988653 3467889999999999999999999998776654


Q ss_pred             cccCCCceeeeEECcCCcEE-EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEE
Q psy10063        607 DISEGSFTSSSTQQPDGLVY-PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLH  685 (894)
Q Consensus       607 ~~~~~~~v~~~~~spdg~~l-~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~  685 (894)
                      .+.        ++.+.+..+ .........+.   +.+.....-+.++..-++.|.+|+                     
T Consensus       267 Vv~--------~~n~~~~~l~~~~e~~~esve---~~~~ss~lpL~A~G~vdG~i~iyD---------------------  314 (399)
T KOG0296|consen  267 VVN--------CNNGTVPELKPSQEELDESVE---SIPSSSKLPLAACGSVDGTIAIYD---------------------  314 (399)
T ss_pred             EEE--------ecCCCCccccccchhhhhhhh---hcccccccchhhcccccceEEEEe---------------------
Confidence            221        000000000 00000000111   100111111111111222222222                     


Q ss_pred             eeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEE
Q psy10063        686 VNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFK  765 (894)
Q Consensus       686 ~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~  765 (894)
                                                                                    +....++..-.|...|..
T Consensus       315 --------------------------------------------------------------~a~~~~R~~c~he~~V~~  332 (399)
T KOG0296|consen  315 --------------------------------------------------------------LAASTLRHICEHEDGVTK  332 (399)
T ss_pred             --------------------------------------------------------------cccchhheeccCCCceEE
Confidence                                                                          111222233457788999


Q ss_pred             EeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        766 MPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       766 la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      +.|-+ ..+|++++.+|.|++||.+.++++.   +|..++..++++++.+++++++.|.    ..+||++.
T Consensus       333 l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~----~a~VF~v~  398 (399)
T KOG0296|consen  333 LKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDN----TALVFEVP  398 (399)
T ss_pred             EEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCC----eEEEEecC
Confidence            99998 7899999999999999999999854   5666777889999999999999998    57888764

>KOG0293|consensus

Probab=99.95  E-value=1.6e-26  Score=237.66  Aligned_cols=258  Identities=17%  Similarity=0.232  Sum_probs=221.5

Q ss_pred             cCCCccceeeeeccCccEEEecCCC--------------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC
Q psy10063        375 SSPLSVDRLNSMSPAARKLATNAEP--------------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM  440 (894)
Q Consensus       375 ~~~~~~~~~~~~s~dg~~l~~~~~~--------------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t  440 (894)
                      ..+.+....+.||++|++||+++.+              .++..+.||...|..+.||||.++|++++.|..+++||+.+
T Consensus       221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~t  300 (519)
T KOG0293|consen  221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDT  300 (519)
T ss_pred             hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCc
Confidence            3455566788999999999988753              23457889999999999999999999999999999999999


Q ss_pred             CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEE
Q psy10063        441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKL  502 (894)
Q Consensus       441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~i  502 (894)
                      |.+...+....+..+.+++|.|||..+++|+.|+.+                  ..|.+|+..+||+++++...|..|++
T Consensus       301 gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l  380 (519)
T KOG0293|consen  301 GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRL  380 (519)
T ss_pred             chhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceee
Confidence            999887764433489999999999999999998877                  36899999999999999999999999


Q ss_pred             EEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC--eEEEE
Q psy10063        503 FTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP--INSLA  580 (894)
Q Consensus       503 wdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~--V~~l~  580 (894)
                      ++.+....+..+..+.+|.++++|.||+++++.-.+..              +++||++..+.++++.||...  |-.-+
T Consensus       381 ~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qe--------------i~LWDl~e~~lv~kY~Ghkq~~fiIrSC  446 (519)
T KOG0293|consen  381 YNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQE--------------IHLWDLEENKLVRKYFGHKQGHFIIRSC  446 (519)
T ss_pred             echhhhhhhccccccCceeEEEEcCCCcEEEEEcccCe--------------eEEeecchhhHHHHhhcccccceEEEec
Confidence            99998888878888899999999999999998887775              899999999999999999764  33334


Q ss_pred             Eec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCc
Q psy10063        581 FHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSG  659 (894)
Q Consensus       581 ~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~  659 (894)
                      |.. +..++++|++|+.|+||+...+                  +.++...||...+.++.+.+.+...+++++  .|+.
T Consensus       447 Fgg~~~~fiaSGSED~kvyIWhr~sg------------------kll~~LsGHs~~vNcVswNP~~p~m~ASas--DDgt  506 (519)
T KOG0293|consen  447 FGGGNDKFIASGSEDSKVYIWHRISG------------------KLLAVLSGHSKTVNCVSWNPADPEMFASAS--DDGT  506 (519)
T ss_pred             cCCCCcceEEecCCCceEEEEEccCC------------------ceeEeecCCcceeeEEecCCCCHHHhhccC--CCCe
Confidence            543 5579999999999999998765                  456677788888888888888888898888  8999


Q ss_pred             eEEechh
Q psy10063        660 VELTKDE  666 (894)
Q Consensus       660 i~l~~~~  666 (894)
                      |++|...
T Consensus       507 IRIWg~~  513 (519)
T KOG0293|consen  507 IRIWGPS  513 (519)
T ss_pred             EEEecCC
Confidence            9999754

>KOG2106|consensus

Probab=99.95  E-value=2.4e-24  Score=226.69  Aligned_cols=395  Identities=16%  Similarity=0.175  Sum_probs=266.1

Q ss_pred             CccceeeeeccCccEEEecC--------CCeEEEEEecCCCCEEEEEEccCCCEEEEecCCC--------cEEEEecCCC
Q psy10063        378 LSVDRLNSMSPAARKLATNA--------EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKG--------DICTWDLRMG  441 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~--------~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg--------~I~iWd~~tg  441 (894)
                      .++...+.+-|-|..+....        +...+..+.||...|.|++.+||.-++++|-..|        .|+|||..+.
T Consensus        65 ~dcR~Nly~lptgE~vyfvA~V~Vl~n~ee~~Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L  144 (626)
T KOG2106|consen   65 VDCRNNLYLLPTGELVYFVAAVGVLYNWEERSQRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTL  144 (626)
T ss_pred             eeeeceeEEccCccEEEEeccEEEEEeehhhhcccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccc
Confidence            33344445566666554332        2233346678999999999999988888775444        4999998887


Q ss_pred             eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec--CCCEEEEE--ECCCCEEEEEcCCCcEEEEEeC-
Q psy10063        442 RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK--DATMFITA--SKDHTAKLFTTHDRQLLKTYTT-  516 (894)
Q Consensus       442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp--dg~~L~sg--s~Dg~V~iwdl~~~~~~~~~~~-  516 (894)
                      .-++.|-....                         .|+|++|++  .|.+|+..  +.+..+.|||...+..+...+. 
T Consensus       145 ~TL~V~g~f~~-------------------------GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~s  199 (626)
T KOG2106|consen  145 STLHVIGFFDR-------------------------GVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTS  199 (626)
T ss_pred             eeeeeeccccc-------------------------cceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceec
Confidence            77777765444                         456666665  34455443  3456789999998887777764 


Q ss_pred             CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE---ccC-CCCCeEEEEEecCCCEEEEEe
Q psy10063        517 ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR---IKG-HFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       517 ~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~---l~~-h~~~V~~l~~spdg~~l~sgs  592 (894)
                      .+.|....|+|.+..|++..+.+.              +.+|+++.+...++   +.+ .+..|.|++|.++|+ +++|.
T Consensus       200 ne~v~~a~FHPtd~nliit~Gk~H--------------~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgD  264 (626)
T KOG2106|consen  200 NEVVFLATFHPTDPNLIITCGKGH--------------LYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGD  264 (626)
T ss_pred             cceEEEEEeccCCCcEEEEeCCce--------------EEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeec
Confidence            577889999999999999888887              77787777665543   333 236899999999987 78999


Q ss_pred             CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063        593 EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMAR  672 (894)
Q Consensus       593 ~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~  672 (894)
                      .+|.|.||+....+..+               .+..++|.++.+...     ..+.+++|.  .|+.|.+|+..-..+.+
T Consensus       265 S~G~i~Iw~~~~~~~~k---------------~~~aH~ggv~~L~~l-----r~GtllSGg--KDRki~~Wd~~y~k~r~  322 (626)
T KOG2106|consen  265 SGGNILIWSKGTNRISK---------------QVHAHDGGVFSLCML-----RDGTLLSGG--KDRKIILWDDNYRKLRE  322 (626)
T ss_pred             CCceEEEEeCCCceEEe---------------EeeecCCceEEEEEe-----cCccEeecC--ccceEEecccccccccc
Confidence            99999999985543211               112455555555542     234556655  78888888833221111


Q ss_pred             hcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCC
Q psy10063        673 NRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSD  752 (894)
Q Consensus       673 ~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~  752 (894)
                      ..+. ...|....+..                         ..+. +.++..        +...+.|       .+....
T Consensus       323 ~elP-e~~G~iRtv~e-------------------------~~~d-i~vGTt--------rN~iL~G-------t~~~~f  360 (626)
T KOG2106|consen  323 TELP-EQFGPIRTVAE-------------------------GKGD-ILVGTT--------RNFILQG-------TLENGF  360 (626)
T ss_pred             ccCc-hhcCCeeEEec-------------------------CCCc-EEEeec--------cceEEEe-------eecCCc
Confidence            0000 00111100000                         0000 111100        0011111       122233


Q ss_pred             cceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeec
Q psy10063        753 TPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHL  832 (894)
Q Consensus       753 ~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~  832 (894)
                      ..+..+|.+..+.++.+|+..+|++++.|+.++||+-.+..-.+.+...+.++.|.|.| .++++...+    ...|.|.
T Consensus       361 ~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G----~w~V~d~  435 (626)
T KOG2106|consen  361 TLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAECADFHPSG-VVAVGTATG----RWFVLDT  435 (626)
T ss_pred             eEEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEEecCceeEeeccCcc-eEEEeeccc----eEEEEec
Confidence            34678899999999999999999999999999999944444445556667778899999 777777665    4789999


Q ss_pred             CCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccc
Q psy10063        833 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYT  882 (894)
Q Consensus       833 ~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~  882 (894)
                      ++..++..-.. ..++.+|+|+|||.+||.|+.|+.|+||.+......+.
T Consensus       436 e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~  484 (626)
T KOG2106|consen  436 ETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYS  484 (626)
T ss_pred             ccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEE
Confidence            98666654444 88999999999999999999999999999987766554

>KOG0313|consensus

Probab=99.95  E-value=7.2e-26  Score=231.23  Aligned_cols=289  Identities=18%  Similarity=0.228  Sum_probs=222.2

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      -|.+.|.+|...  +++|++|++||.++|||.. |++++.+.+|.+ +                        |.+++|.-
T Consensus       103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~-~------------------------ik~v~~v~  154 (423)
T KOG0313|consen  103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTG-P------------------------IKSVAWVI  154 (423)
T ss_pred             cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCc-c------------------------eeeeEEEe
Confidence            488999999888  7899999999999999966 999999999998 4                        44444432


Q ss_pred             ---CCCEEEEEECCCCEEEEEcCCCcEEE----E-EeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce--eeE-
Q psy10063        487 ---DATMFITASKDHTAKLFTTHDRQLLK----T-YTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK--FDA-  555 (894)
Q Consensus       487 ---dg~~L~sgs~Dg~V~iwdl~~~~~~~----~-~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~--~~v-  555 (894)
                         ....|++++.|.++++|.++.++...    . -.|...|.+++..++|.++++++.|..+.+|........  ..+ 
T Consensus       155 ~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s  234 (423)
T KOG0313|consen  155 KNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSS  234 (423)
T ss_pred             cCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccc
Confidence               23369999999999999988765432    1 145688999999999999999999999888872211110  000 


Q ss_pred             --------EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        556 --------RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       556 --------~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                              +--....+.++..+.||..+|.++.|++ ...+++++.|.+|++||+..+..+.                  
T Consensus       235 ~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~------------------  295 (423)
T KOG0313|consen  235 NRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKS------------------  295 (423)
T ss_pred             hhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeeccccee------------------
Confidence                    1111123446677899999999999987 6789999999999999997654210                  


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                             .+                                                                       
T Consensus       296 -------~~-----------------------------------------------------------------------  297 (423)
T KOG0313|consen  296 -------TL-----------------------------------------------------------------------  297 (423)
T ss_pred             -------ee-----------------------------------------------------------------------
Confidence                   00                                                                       


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                                                                        .....+.|+.++|..++||+|+.|..||||
T Consensus       298 --------------------------------------------------~~~ksl~~i~~~~~~~Ll~~gssdr~irl~  327 (423)
T KOG0313|consen  298 --------------------------------------------------TTNKSLNCISYSPLSKLLASGSSDRHIRLW  327 (423)
T ss_pred             --------------------------------------------------ecCcceeEeecccccceeeecCCCCceeec
Confidence                                                              011235688888999999999999999999


Q ss_pred             EccCCce------eeccccCCCceEeecCCCe-EEEEecCCCCceeEEEeecCCcc-eeeeccCCCCCeeEEEEeeCCcE
Q psy10063        788 RDRKNKA------TAGFLLSCPDFLFDFDTTR-EVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSLAFHPDGKS  859 (894)
Q Consensus       788 d~~~~~~------~~~~~~~~~~~~fS~dg~~-l~~as~d~~g~~~I~vwd~~tg~-~l~~l~gH~~~V~~l~fSpdg~~  859 (894)
                      |.+.+.-      +.+|..-+..+.|+|...+ +++++-|+    .++|||+++.+ .+..+.+|.+.|.++.|. ++.+
T Consensus       328 DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~----t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~  402 (423)
T KOG0313|consen  328 DPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN----TVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGL  402 (423)
T ss_pred             CCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCC----eEEEEEeccCCCcceeeccCCceEEEEecc-CCce
Confidence            9876532      2334444557779996655 66667776    69999999887 899999999999999998 4778


Q ss_pred             EEEecCCCcEEEEecC
Q psy10063        860 YASGGEDGFVRLHTFD  875 (894)
Q Consensus       860 LaS~s~Dg~V~vWdl~  875 (894)
                      |++||.|..|+|+.-.
T Consensus       403 IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  403 IVSGGADNKLRIFKGS  418 (423)
T ss_pred             EEeccCcceEEEeccc
Confidence            9999999999998753

>KOG0281|consensus

Probab=99.95  E-value=3.8e-27  Score=236.88  Aligned_cols=233  Identities=15%  Similarity=0.192  Sum_probs=197.4

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      +.|+|+++.  ...+++|..|.+|+|||..+..+++.+.+ .+.|.|+.|..  +.|++|+.|..              |
T Consensus       198 kgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsT--------------v  259 (499)
T KOG0281|consen  198 KGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDST--------------V  259 (499)
T ss_pred             CceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCce--------------E
Confidence            589999985  45799999999999999999999988775 58899999874  58888888886              9


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      ++||+.+|+++..+.+|...|..+.|+  ..++++++.|..|.|||+.....+                           
T Consensus       260 rvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~i---------------------------  310 (499)
T KOG0281|consen  260 RVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDI---------------------------  310 (499)
T ss_pred             EEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHH---------------------------
Confidence            999999999999999999999999996  458999999999999998643110                           


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       311 --------------------------------------------------------------------------------  310 (499)
T KOG0281|consen  311 --------------------------------------------------------------------------------  310 (499)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                         ....++.||...|..+.|+  .+|+++++.|.+|++|+..+.+.+
T Consensus       311 -----------------------------------t~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efv  353 (499)
T KOG0281|consen  311 -----------------------------------TLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFV  353 (499)
T ss_pred             -----------------------------------HHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeee
Confidence                                               0112456788888888876  569999999999999999999887


Q ss_pred             eccccCCCce-EeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        796 AGFLLSCPDF-LFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       796 ~~~~~~~~~~-~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      +.+......+ |+-..|+++++++.|.    +|++||+..|++++.|+||..-|.++.|.  .+.+++|+.||+|+|||+
T Consensus       354 Rtl~gHkRGIAClQYr~rlvVSGSSDn----tIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl  427 (499)
T KOG0281|consen  354 RTLNGHKRGIACLQYRDRLVVSGSSDN----TIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL  427 (499)
T ss_pred             hhhhcccccceehhccCeEEEecCCCc----eEEEEeccccHHHHHHhchHHhhhheeec--CceeeeccccceEEEEec
Confidence            7665554444 4667888889888887    69999999999999999999999999995  688999999999999999


Q ss_pred             Ccccc
Q psy10063        875 DQAYF  879 (894)
Q Consensus       875 ~~~~~  879 (894)
                      ..+..
T Consensus       428 ~aald  432 (499)
T KOG0281|consen  428 QAALD  432 (499)
T ss_pred             ccccC
Confidence            76543

>KOG0292|consensus

Probab=99.94  E-value=3e-24  Score=238.68  Aligned_cols=224  Identities=17%  Similarity=0.307  Sum_probs=185.5

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----  476 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----  476 (894)
                      +...|.+|.++|+.++|+|++.+++||++|..|+||+.+..+++.+|.||.+ .|+.+.|++.--+|+++++|..|    
T Consensus        43 li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlD-YVRt~~FHheyPWIlSASDDQTIrIWN  121 (1202)
T KOG0292|consen   43 LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLD-YVRTVFFHHEYPWILSASDDQTIRIWN  121 (1202)
T ss_pred             HHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccc-eeEEeeccCCCceEEEccCCCeEEEEe
Confidence            3336789999999999999999999999999999999999999999999999 99999999999999999999887    


Q ss_pred             --------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc-----------------------------EEEE
Q psy10063        477 --------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ-----------------------------LLKT  513 (894)
Q Consensus       477 --------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-----------------------------~~~~  513 (894)
                                    ..|.|.+|+|...+++++|.|.+|||||+...+                             ..+.
T Consensus       122 wqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~V  201 (1202)
T KOG0292|consen  122 WQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHV  201 (1202)
T ss_pred             ccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeee
Confidence                          589999999999999999999999999985311                             1123


Q ss_pred             Ee-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe
Q psy10063        514 YT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       514 ~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs  592 (894)
                      ++ |+..|..++|+|.-..|++|+.|+.+++|.+..      -+.|.      +....||...|.++-|+|...+|++.|
T Consensus       202 LEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne------tKaWE------vDtcrgH~nnVssvlfhp~q~lIlSns  269 (1202)
T KOG0292|consen  202 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE------TKAWE------VDTCRGHYNNVSSVLFHPHQDLILSNS  269 (1202)
T ss_pred             ecccccccceEEecCCcceEEecCCcceeeEEEecc------cccee------ehhhhcccCCcceEEecCccceeEecC
Confidence            33 346799999999999999999999865554442      23343      335689999999999999999999999


Q ss_pred             CCCcEEEEECCCCcccc----CCCceeeeEECcCCcEE-EecCCeEEEEe
Q psy10063        593 EDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVY-PSQGGHIHSLS  637 (894)
Q Consensus       593 ~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l-~~~~g~i~~~~  637 (894)
                      +|+.|||||+.....+.    +......++..|...++ +.+++.+..+.
T Consensus       270 EDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFk  319 (1202)
T KOG0292|consen  270 EDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFK  319 (1202)
T ss_pred             CCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeecCCceEEEE
Confidence            99999999998876553    45566677888888777 44454444444

>KOG0274|consensus

Probab=99.94  E-value=2.4e-25  Score=253.84  Aligned_cols=278  Identities=16%  Similarity=0.279  Sum_probs=237.1

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      |...|.+..|.  +.++++++.|++|++||...++.+.. +.+|.+                         .|++++|..
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g-------------------------~V~~l~~~~  259 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFG-------------------------GVWGLAFPS  259 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCC-------------------------CceeEEEec
Confidence            67888899998  56899999999999999999999888 999998                         778888877


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE  565 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~  565 (894)
                      .+.+|++|+.|.+++|||+.+|+|.+.+.+ ...|.++...+  .+++.|+.|..              |++|++..+.+
T Consensus       260 ~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~t--------------VkVW~v~n~~~  323 (537)
T KOG0274|consen  260 GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNT--------------VKVWDVTNGAC  323 (537)
T ss_pred             CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccCCce--------------EEEEeccCcce
Confidence            788999999999999999999999999995 46777777654  46666677776              99999999999


Q ss_pred             EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCC
Q psy10063        566 FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTD  645 (894)
Q Consensus       566 ~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d  645 (894)
                      +..+.+|.+.|.++.++  +.+|++|+.||.|+||++..++                                       
T Consensus       324 l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~---------------------------------------  362 (537)
T KOG0274|consen  324 LNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK---------------------------------------  362 (537)
T ss_pred             EEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhce---------------------------------------
Confidence            99999999999999996  7899999999999999985432                                       


Q ss_pred             CCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccC
Q psy10063        646 TGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFD  725 (894)
Q Consensus       646 ~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~  725 (894)
                                                                                                      
T Consensus       363 --------------------------------------------------------------------------------  362 (537)
T KOG0274|consen  363 --------------------------------------------------------------------------------  362 (537)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC-ceeeccccCCCc
Q psy10063        726 EQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN-KATAGFLLSCPD  804 (894)
Q Consensus       726 ~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~-~~~~~~~~~~~~  804 (894)
                                                .+..+.+|...|+++.+... .++++|+.|+.|++||+... +++..+ .++..
T Consensus       363 --------------------------cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl-~~h~~  414 (537)
T KOG0274|consen  363 --------------------------CLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTL-QGHTS  414 (537)
T ss_pred             --------------------------eeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhh-cCCcc
Confidence                                      11245678889999988766 89999999999999999998 554433 33333


Q ss_pred             eE--eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccc
Q psy10063        805 FL--FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDY  881 (894)
Q Consensus       805 ~~--fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~  881 (894)
                      ++  +...+++|+++..|+    .|++||...+++++.+.+ |.+.|.++++.  ...+++++.||.+++||++.+.+..
T Consensus       415 ~v~~l~~~~~~Lvs~~aD~----~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~  488 (537)
T KOG0274|consen  415 LVSSLLLRDNFLVSSSADG----TIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIR  488 (537)
T ss_pred             cccccccccceeEeccccc----cEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhh
Confidence            33  567889999999998    699999999999999999 78899988887  5678889999999999999999888


Q ss_pred             cc
Q psy10063        882 TF  883 (894)
Q Consensus       882 ~~  883 (894)
                      .+
T Consensus       489 ~l  490 (537)
T KOG0274|consen  489 TL  490 (537)
T ss_pred             hh
Confidence            66

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.94  E-value=7.5e-25  Score=269.23  Aligned_cols=273  Identities=14%  Similarity=0.205  Sum_probs=217.8

Q ss_pred             CCccceeeeeccCccEEEecCCC-eEEEEE-----------------ecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEe
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-VVKMQV-----------------TDQSAKITSLLWGN-LDQYIITGHAKGDICTWD  437 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~~~l-----------------~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd  437 (894)
                      .......++|+++|++|+.++.+ .++++-                 ..+...|.+++|++ ++.+|++++.||.|+|||
T Consensus       482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd  561 (793)
T PLN00181        482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWD  561 (793)
T ss_pred             CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEE
Confidence            34445667899999999877654 333321                 12346789999987 478999999999999999


Q ss_pred             cCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC
Q psy10063        438 LRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT  516 (894)
Q Consensus       438 ~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~  516 (894)
                      +.+++.+..+.+|.+                         .|.+|+|+| ++.+|++|+.||.|+|||++.++++..+.+
T Consensus       562 ~~~~~~~~~~~~H~~-------------------------~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~  616 (793)
T PLN00181        562 VARSQLVTEMKEHEK-------------------------RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT  616 (793)
T ss_pred             CCCCeEEEEecCCCC-------------------------CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence            999999999999988                         788888886 788999999999999999999999998888


Q ss_pred             CCCeeEEEEc-CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        517 ERPVNSAALS-PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       517 ~~~v~~l~~s-pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      +..+.+++|+ ++|.+|++|+.++.              |++||++.++ .+..+.+|...|.+++|. ++.+|++++.|
T Consensus       617 ~~~v~~v~~~~~~g~~latgs~dg~--------------I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D  681 (793)
T PLN00181        617 KANICCVQFPSESGRSLAFGSADHK--------------VYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTD  681 (793)
T ss_pred             CCCeEEEEEeCCCCCEEEEEeCCCe--------------EEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECC
Confidence            8889999995 57999999999986              8899988765 466778999999999997 78899999999


Q ss_pred             CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhc
Q psy10063        595 GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNR  674 (894)
Q Consensus       595 g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~  674 (894)
                      +.|+|||+......                                                                  
T Consensus       682 ~~ikiWd~~~~~~~------------------------------------------------------------------  695 (793)
T PLN00181        682 NTLKLWDLSMSISG------------------------------------------------------------------  695 (793)
T ss_pred             CEEEEEeCCCCccc------------------------------------------------------------------
Confidence            99999998532100                                                                  


Q ss_pred             ccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcc
Q psy10063        675 MSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTP  754 (894)
Q Consensus       675 ~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~  754 (894)
                                                                                               .....+.
T Consensus       696 -------------------------------------------------------------------------~~~~~l~  702 (793)
T PLN00181        696 -------------------------------------------------------------------------INETPLH  702 (793)
T ss_pred             -------------------------------------------------------------------------cCCcceE
Confidence                                                                                     0000011


Q ss_pred             eecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc----------------ccCCCceEeecCCCeEEEEe
Q psy10063        755 ILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF----------------LLSCPDFLFDFDTTREVTTT  818 (894)
Q Consensus       755 ~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~----------------~~~~~~~~fS~dg~~l~~as  818 (894)
                      .+.+|...+.+++|++++.+||+|+.|+.|++|+......+..+                ...+..++|++++..|++++
T Consensus       703 ~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~  782 (793)
T PLN00181        703 SFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAAN  782 (793)
T ss_pred             EEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEec
Confidence            24457777889999999999999999999999997654332111                11245778999999999999


Q ss_pred             cCCCCceeEEEeec
Q psy10063        819 STKVGKFDARFYHL  832 (894)
Q Consensus       819 ~d~~g~~~I~vwd~  832 (894)
                      .++    .|+||++
T Consensus       783 ~dG----~I~i~~~  792 (793)
T PLN00181        783 STG----NIKILEM  792 (793)
T ss_pred             CCC----cEEEEec
Confidence            887    5999986

>KOG0283|consensus

Probab=99.94  E-value=1.7e-25  Score=250.81  Aligned_cols=185  Identities=15%  Similarity=0.248  Sum_probs=139.8

Q ss_pred             EEe-cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC--------------------------------
Q psy10063        404 QVT-DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH--------------------------------  450 (894)
Q Consensus       404 ~l~-~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h--------------------------------  450 (894)
                      .+. .|.+.|+++.||+||+|||+||.||.|+||.+...+....-.+.                                
T Consensus       261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~  340 (712)
T KOG0283|consen  261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR  340 (712)
T ss_pred             ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence            555 89999999999999999999999999999998652211000000                                


Q ss_pred             CCCCeeEEEEcCCCCEEE----EEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEc
Q psy10063        451 AKEPINDMQFSKDATMFI----TASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALS  526 (894)
Q Consensus       451 ~~~~V~~v~~spdg~~la----~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~s  526 (894)
                      ......+ ...|+-..++    .+...|+.+.|.+|.|+.+ .+|++++.|++||||++...+|++.|.|.+.|+|++|+
T Consensus       341 ~~~~s~~-~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFn  418 (712)
T KOG0283|consen  341 KGSQSPC-VLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFN  418 (712)
T ss_pred             cccCCcc-ccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEec
Confidence            0000001 0111111111    1223455579999999975 57999999999999999999999999999999999999


Q ss_pred             C-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        527 P-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       527 p-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      | |.+|+++|+-|+.              ||||++...+.+.-...+ .-|++++|.|||++.+.|+.+|.+++|+....
T Consensus       419 PvDDryFiSGSLD~K--------------vRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G~C~fY~t~~l  483 (712)
T KOG0283|consen  419 PVDDRYFISGSLDGK--------------VRLWSISDKKVVDWNDLR-DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGL  483 (712)
T ss_pred             ccCCCcEeecccccc--------------eEEeecCcCeeEeehhhh-hhheeEEeccCCceEEEEEeccEEEEEEccCC
Confidence            9 6789999999997              777777766655544433 78999999999999999999999999998654

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.94  E-value=3.1e-24  Score=229.24  Aligned_cols=264  Identities=22%  Similarity=0.309  Sum_probs=215.5

Q ss_pred             cceeeeeccCccEEEecCC-Ce----------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063        380 VDRLNSMSPAARKLATNAE-PV----------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS  448 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~-~~----------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~  448 (894)
                      ....+.|++++++|+.+.. +.          ....+.+|...|.++.|++++++|++++.||.|+|||+..++.+..+.
T Consensus        11 ~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~   90 (289)
T cd00200          11 GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT   90 (289)
T ss_pred             CEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEe
Confidence            3445567777777666542 22          223567899999999999999999999999999999999888888888


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcC
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSP  527 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~sp  527 (894)
                      .|..                         .|.+++|++++++|++++.||.|++||++.++.+..+. +...+.+++|++
T Consensus        91 ~~~~-------------------------~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~  145 (289)
T cd00200          91 GHTS-------------------------YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP  145 (289)
T ss_pred             ccCC-------------------------cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC
Confidence            8876                         68888888888888888889999999999988888887 567899999999


Q ss_pred             CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        528 ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       528 dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                      ++.+|++++.++.              |++||+..++.+..+..|...|.+++|++++++|++++.||.|++||+..++.
T Consensus       146 ~~~~l~~~~~~~~--------------i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~  211 (289)
T cd00200         146 DGTFVASSSQDGT--------------IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC  211 (289)
T ss_pred             cCCEEEEEcCCCc--------------EEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCce
Confidence            9888888876775              89999998888888889999999999999999999999999999999854321


Q ss_pred             ccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEee
Q psy10063        608 ISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVN  687 (894)
Q Consensus       608 ~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~  687 (894)
                      +                                                                               
T Consensus       212 ~-------------------------------------------------------------------------------  212 (289)
T cd00200         212 L-------------------------------------------------------------------------------  212 (289)
T ss_pred             e-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             ccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEe
Q psy10063        688 PFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMP  767 (894)
Q Consensus       688 ~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la  767 (894)
                                                                                        ..+..|...+.+++
T Consensus       213 ------------------------------------------------------------------~~~~~~~~~i~~~~  226 (289)
T cd00200         213 ------------------------------------------------------------------GTLRGHENGVNSVA  226 (289)
T ss_pred             ------------------------------------------------------------------cchhhcCCceEEEE
Confidence                                                                              00112444678899


Q ss_pred             eCCCCCEEEEecCCCcEEEEEccCCceeeccc---cCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063        768 EPPKREKLALALADKVSERYRDRKNKATAGFL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYH  831 (894)
Q Consensus       768 ~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd  831 (894)
                      |++++.+|++++.|+.|++|++..++.+..+.   ..+..++|++++..+++++.++    .|+||+
T Consensus       227 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~iw~  289 (289)
T cd00200         227 FSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADG----TIRIWD  289 (289)
T ss_pred             EcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCC----eEEecC
Confidence            99998899988889999999998776655443   3455778999999999998887    599996

>KOG0973|consensus

Probab=99.94  E-value=3.6e-25  Score=254.05  Aligned_cols=181  Identities=19%  Similarity=0.213  Sum_probs=143.6

Q ss_pred             CCCCEEEEEEccCCCEEEEec--CCCcEEEEecCCC------------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        408 QSAKITSLLWGNLDQYIITGH--AKGDICTWDLRMG------------RELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs--~Dg~I~iWd~~tg------------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      |...|.+++.+|||..+++|+  .||.++||..+.-            +.+.....|.+                     
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~---------------------   70 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDG---------------------   70 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccC---------------------
Confidence            456799999999999999999  8999999986531            11222233333                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCC------------------CcEEEEEe-CCCCeeEEEEcCCCCEEEE
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHD------------------RQLLKTYT-TERPVNSAALSPILPHVVL  534 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~------------------~~~~~~~~-~~~~v~~l~~spdg~~l~~  534 (894)
                          .|.|+.|++||++||+|++|+.|.||+...                  .+++..+. |...|..++|+|++.+|++
T Consensus        71 ----sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS  146 (942)
T KOG0973|consen   71 ----SVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS  146 (942)
T ss_pred             ----ceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE
Confidence                788888888888888888888888887662                  12445555 5689999999999999999


Q ss_pred             EECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-------
Q psy10063        535 GGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-------  607 (894)
Q Consensus       535 ~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-------  607 (894)
                      ++.|+.              |.+|+.++++.+..+.+|.+.|..+.|+|-|+||++-+.|+.|+||+...-..       
T Consensus       147 ~s~Dns--------------Viiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~p  212 (942)
T KOG0973|consen  147 VSLDNS--------------VIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKP  212 (942)
T ss_pred             ecccce--------------EEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccc
Confidence            999997              88999999999999999999999999999999999999999999999654221       


Q ss_pred             ---ccCCCceeeeEECcCCcEEE
Q psy10063        608 ---ISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       608 ---~~~~~~v~~~~~spdg~~l~  627 (894)
                         ......+..+.|+|||++++
T Consensus       213 f~~~~~~T~f~RlSWSPDG~~la  235 (942)
T KOG0973|consen  213 FEESPLTTFFLRLSWSPDGHHLA  235 (942)
T ss_pred             hhhCCCcceeeecccCCCcCeec
Confidence               12234556677777776663

>KOG1446|consensus

Probab=99.94  E-value=8.3e-24  Score=212.71  Aligned_cols=289  Identities=16%  Similarity=0.202  Sum_probs=231.7

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+..-.+.|.+|.|+++|.+|++++.|..|+|||...|++++.+..++.                         .|..++
T Consensus         9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skky-------------------------G~~~~~   63 (311)
T KOG1446|consen    9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKY-------------------------GVDLAC   63 (311)
T ss_pred             ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccc-------------------------cccEEE
Confidence            4555789999999999999999999999999999999999999998877                         455566


Q ss_pred             EecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        484 FSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       484 ~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      |......++.++.  |..||..++.+.+.++.|.+ ...|.+|+.+|-+..+++++.|+.              ||+||+
T Consensus        64 Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~t--------------vrLWDl  129 (311)
T KOG1446|consen   64 FTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKT--------------VRLWDL  129 (311)
T ss_pred             EecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCe--------------EEeeEe
Confidence            6555555555554  88999999999999999996 588999999999999999999997              899999


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      +..++...+...  .-..++|+|+|-++|.+.....|++||++....-.                       ...+    
T Consensus       130 R~~~cqg~l~~~--~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgP-----------------------F~tf----  180 (311)
T KOG1446|consen  130 RVKKCQGLLNLS--GRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGP-----------------------FTTF----  180 (311)
T ss_pred             cCCCCceEEecC--CCcceeECCCCcEEEEecCCCeEEEEEecccCCCC-----------------------ceeE----
Confidence            988877666433  33467899999999999888899999986532100                       0000    


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (311)
T KOG1446|consen  181 --------------------------------------------------------------------------------  180 (311)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL  800 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~  800 (894)
                                                .       +..........|.|||||++|+.+...+.+++.|.-++..+..+..
T Consensus       181 --------------------------~-------i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~  227 (311)
T KOG1446|consen  181 --------------------------S-------ITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSG  227 (311)
T ss_pred             --------------------------c-------cCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEee
Confidence                                      0       0001122346789999999999999999999999999887665543


Q ss_pred             CC------CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-CCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        801 SC------PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-HFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       801 ~~------~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      ..      ...+|+||++++++++.|+    .|.+|++++|+.+.++++ |.+++.++.|.|.-.++|+++  ..+.+|-
T Consensus       228 ~~~~~~~~~~a~ftPds~Fvl~gs~dg----~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~  301 (311)
T KOG1446|consen  228 YPNAGNLPLSATFTPDSKFVLSGSDDG----TIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWL  301 (311)
T ss_pred             ccCCCCcceeEEECCCCcEEEEecCCC----cEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEEe
Confidence            22      2567999999999999988    699999999999999998 899999999999777777664  5688897


Q ss_pred             cCcccc
Q psy10063        874 FDQAYF  879 (894)
Q Consensus       874 l~~~~~  879 (894)
                      ....++
T Consensus       302 p~~~~~  307 (311)
T KOG1446|consen  302 PDEDAL  307 (311)
T ss_pred             cccccc
Confidence            765543

>KOG0268|consensus

Probab=99.94  E-value=6.2e-26  Score=230.16  Aligned_cols=290  Identities=15%  Similarity=0.129  Sum_probs=233.7

Q ss_pred             eEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      .+...|.||.+.|.||+=+|.. ..|++|+.||.|+|||+.+..++..|+.|.+                         .
T Consensus        57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G-------------------------~  111 (433)
T KOG0268|consen   57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEG-------------------------L  111 (433)
T ss_pred             cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccC-------------------------c
Confidence            3445779999999999999976 7899999999999999999999999999998                         5


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      |..|++..  ..+++++.|.+|+.|-+.. .+++.+.+...+..|.-+..+..++++|.+                |.||
T Consensus       112 V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~p~~tilg~s~~~gIdh~~~~~~FaTcGe~----------------i~IW  172 (433)
T KOG0268|consen  112 VRGICVTQ--TSFFTVGDDKTVKQWKIDG-PPLHTILGKSVYLGIDHHRKNSVFATCGEQ----------------IDIW  172 (433)
T ss_pred             eeeEEecc--cceEEecCCcceeeeeccC-CcceeeeccccccccccccccccccccCce----------------eeec
Confidence            66666665  6689999999999998765 588888888888888888877777777643                8899


Q ss_pred             eccccceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      |.....++..+..-...|.++.|+|-. ..|++|++|+.|.+||++....+..              ++           
T Consensus       173 D~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~K--------------Vi-----------  227 (433)
T KOG0268|consen  173 DEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKK--------------VI-----------  227 (433)
T ss_pred             ccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccce--------------ee-----------
Confidence            999999999998888899999999965 4677888999999999987653310              00           


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                   ..                                                                 
T Consensus       228 -------------~~-----------------------------------------------------------------  229 (433)
T KOG0268|consen  228 -------------LT-----------------------------------------------------------------  229 (433)
T ss_pred             -------------ee-----------------------------------------------------------------
Confidence                         00                                                                 


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                                                 -.-..|+|.|++-.|++|..|..++.||.+..+....
T Consensus       230 -------------------------------------------mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~  266 (433)
T KOG0268|consen  230 -------------------------------------------MRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLN  266 (433)
T ss_pred             -------------------------------------------ccccceecCccccceeeccccccceehhhhhhcccch
Confidence                                                       0124688899888899999999999999988776443


Q ss_pred             cccC----CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc-CCCCCeeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063        798 FLLS----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFVRLH  872 (894)
Q Consensus       798 ~~~~----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~-gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vW  872 (894)
                      ...+    +.++.|||-|+.+++++-|+    .|+||.+..+.....+. -....|.||.||.|.+|+++||+|+.||||
T Consensus       267 v~~dhvsAV~dVdfsptG~EfvsgsyDk----sIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlW  342 (433)
T KOG0268|consen  267 VHKDHVSAVMDVDFSPTGQEFVSGSYDK----SIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLW  342 (433)
T ss_pred             hhcccceeEEEeccCCCcchhccccccc----eEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeee
Confidence            3333    33566999999999999998    59999998775443332 234569999999999999999999999999


Q ss_pred             ecCcccccccc
Q psy10063        873 TFDQAYFDYTF  883 (894)
Q Consensus       873 dl~~~~~~~~~  883 (894)
                      .-...+.+..+
T Consensus       343 ka~Aseklgv~  353 (433)
T KOG0268|consen  343 KAKASEKLGVI  353 (433)
T ss_pred             ecchhhhcCCC
Confidence            97766555544

>KOG0289|consensus

Probab=99.94  E-value=7.5e-25  Score=226.98  Aligned_cols=275  Identities=22%  Similarity=0.226  Sum_probs=235.2

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ..|.++...+....+++|+.|..+.|+|...++.+..|+||..                         .|.++.|+++..
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~k-------------------------ki~~v~~~~~~~  274 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTK-------------------------KITSVKFHKDLD  274 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcce-------------------------EEEEEEeccchh
Confidence            5688888888878999999999999999999999999999998                         788889999999


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      .+++++.|..|+||......+.... .|+.+|..+..+|.|.||++++.++.              +.+.|++.|..+..
T Consensus       275 ~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~--------------w~Fsd~~~g~~lt~  340 (506)
T KOG0289|consen  275 TVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGT--------------WAFSDISSGSQLTV  340 (506)
T ss_pred             heeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCce--------------EEEEEccCCcEEEE
Confidence            9999999999999998766555444 46899999999999999999999997              77889999988877


Q ss_pred             ccCC--CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCC
Q psy10063        569 IKGH--FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDT  646 (894)
Q Consensus       569 l~~h--~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~  646 (894)
                      ....  .-.+.+++|+|||-+|.+|..||.|+|||+.....                                       
T Consensus       341 vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~---------------------------------------  381 (506)
T KOG0289|consen  341 VSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTN---------------------------------------  381 (506)
T ss_pred             EeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccc---------------------------------------
Confidence            6542  23689999999999999999999999999864310                                       


Q ss_pred             CeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCc
Q psy10063        647 GGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDE  726 (894)
Q Consensus       647 ~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~  726 (894)
                                                                                                      
T Consensus       382 --------------------------------------------------------------------------------  381 (506)
T KOG0289|consen  382 --------------------------------------------------------------------------------  381 (506)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc----CC
Q psy10063        727 QQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL----SC  802 (894)
Q Consensus       727 ~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~----~~  802 (894)
                                                ...+.+|.+.|..|+|+..|-|||+++.|+.|++||+++.+....+..    ++
T Consensus       382 --------------------------~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v  435 (506)
T KOG0289|consen  382 --------------------------VAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEV  435 (506)
T ss_pred             --------------------------cccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccc
Confidence                                      012456899999999999999999999999999999999887665543    45


Q ss_pred             CceEeecCCCeEEEEecCCCCceeEEEeecC----CcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLI----FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~----tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      ..++|...|.+|++++.+      |+||-.+    ...++..+..|.+...++.|....++|+++|.|..++|+.+
T Consensus       436 ~s~~fD~SGt~L~~~g~~------l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  436 NSLSFDQSGTYLGIAGSD------LQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             eeEEEcCCCCeEEeecce------eEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            688899999999998544      5555554    55778888899999999999999999999999999999875

>KOG0772|consensus

Probab=99.94  E-value=6.9e-25  Score=231.34  Aligned_cols=293  Identities=15%  Similarity=0.129  Sum_probs=218.9

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR----ELESISGHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      ...+.|.+|...|.++++.|.|.+|++|+.|..|++||+....    ..+.|.....                       
T Consensus       158 shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~-----------------------  214 (641)
T KOG0772|consen  158 SHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCET-----------------------  214 (641)
T ss_pred             cceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccc-----------------------
Confidence            3456789999999999999999999999999999999986432    1222221111                       


Q ss_pred             ccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-------------CCCCeeEEEEcCCCC-EEEEEECCCCe
Q psy10063        476 VEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-------------TERPVNSAALSPILP-HVVLGGGQEAR  541 (894)
Q Consensus       476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-------------~~~~v~~l~~spdg~-~l~~~~~~~~~  541 (894)
                       ..|.+++|++.|..|++.+....++|+|-...+++..++             |-..+.|.+|+|+.+ .+++++.|+. 
T Consensus       215 -h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dgt-  292 (641)
T KOG0772|consen  215 -HQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGT-  292 (641)
T ss_pred             -cccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCc-
Confidence             157788888888888887778888888855444443333             224688999999876 5667777887 


Q ss_pred             EEEeccCccceeeEEEEeccccceE-EEc-----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCcee
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEF-ARI-----KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTS  615 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~-~~l-----~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~  615 (894)
                                   +|+||+...+.. ..+     .+..-.+..++|++||.+||+|+.||.|.+|+.......       
T Consensus       293 -------------lRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~-------  352 (641)
T KOG0772|consen  293 -------------LRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVR-------  352 (641)
T ss_pred             -------------EEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccc-------
Confidence                         777777644322 222     234457899999999999999999999999997321000       


Q ss_pred             eeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCccee
Q psy10063        616 SSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  695 (894)
Q Consensus       616 ~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  695 (894)
                                                                                                      
T Consensus       353 --------------------------------------------------------------------------------  352 (641)
T KOG0772|consen  353 --------------------------------------------------------------------------------  352 (641)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC--ceEEEeeCCCCC
Q psy10063        696 ELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD--IGFKMPEPPKRE  773 (894)
Q Consensus       696 ~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~--~v~~la~spdg~  773 (894)
                                                                             ....+...|..  .|.||.||+||+
T Consensus       353 -------------------------------------------------------p~~~vk~AH~~g~~Itsi~FS~dg~  377 (641)
T KOG0772|consen  353 -------------------------------------------------------PVMKVKDAHLPGQDITSISFSYDGN  377 (641)
T ss_pred             -------------------------------------------------------cceEeeeccCCCCceeEEEeccccc
Confidence                                                                   00011223444  789999999999


Q ss_pred             EEEEecCCCcEEEEEccCCceeeccc------cCCCceEeecCCCeEEEEecCCC--CceeEEEeecCCcceeeeccCCC
Q psy10063        774 KLALALADKVSERYRDRKNKATAGFL------LSCPDFLFDFDTTREVTTTSTKV--GKFDARFYHLIFEEEFARIKGHF  845 (894)
Q Consensus       774 ~Latgs~Dg~I~iwd~~~~~~~~~~~------~~~~~~~fS~dg~~l~~as~d~~--g~~~I~vwd~~tg~~l~~l~gH~  845 (894)
                      +|++-+.|+.+++||++..+......      .....++|||+.+.++++.....  +...+++||..+.+.+..+.-..
T Consensus       378 ~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~  457 (641)
T KOG0772|consen  378 YLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIST  457 (641)
T ss_pred             hhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCC
Confidence            99999999999999999877643222      33457899999999999866432  22359999999999998888778


Q ss_pred             CCeeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063        846 GPINSLAFHPDGKSYASGGEDGFVRLH  872 (894)
Q Consensus       846 ~~V~~l~fSpdg~~LaS~s~Dg~V~vW  872 (894)
                      ..|..+.|+|--..|+.++.||.++||
T Consensus       458 aSvv~~~WhpkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  458 ASVVRCLWHPKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             ceEEEEeecchhhheeeecCCCceEEE
Confidence            889999999998889999999999886

>KOG0300|consensus

Probab=99.93  E-value=4.8e-25  Score=219.30  Aligned_cols=310  Identities=14%  Similarity=0.162  Sum_probs=229.1

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      +...|.||++.|+.++...-..++.+++.|.+.+||.+++|+|+..+.||.+ .|.+|+|++.+.++++++.|+.. .|+
T Consensus       140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~G-SVNsikfh~s~~L~lTaSGD~ta-HIW  217 (481)
T KOG0300|consen  140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTG-SVNSIKFHNSGLLLLTASGDETA-HIW  217 (481)
T ss_pred             ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeeccccc-ceeeEEeccccceEEEccCCcch-HHH
Confidence            3347789999999999887777999999999999999999999999999998 67777777776666666666543 111


Q ss_pred             E--EEEe-cC--------CCEEEEEECCCCEEEEEc---CCC----cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        481 D--MQFS-KD--------ATMFITASKDHTAKLFTT---HDR----QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       481 ~--l~~s-pd--------g~~L~sgs~Dg~V~iwdl---~~~----~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      .  +.|- |.        ++-=.-+ .|...+.-|-   .++    .++..+. |...|.+..|...|+.++.++.|+. 
T Consensus       218 ~~av~~~vP~~~a~~~hSsEeE~e~-sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRT-  295 (481)
T KOG0300|consen  218 KAAVNWEVPSNNAPSDHSSEEEEEH-SDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRT-  295 (481)
T ss_pred             HHhhcCcCCCCCCCCCCCchhhhhc-ccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecccc-
Confidence            1  1110 00        0000000 0111111110   011    1334454 4577889999999999999999997 


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECc
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQP  621 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~sp  621 (894)
                                   ..+||+++|+.+..|.||......++-+|..+++++.+.|-..++||++...               
T Consensus       296 -------------AnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI---------------  347 (481)
T KOG0300|consen  296 -------------ANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAI---------------  347 (481)
T ss_pred             -------------ceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhc---------------
Confidence                         7899999999999999999999999999999999999999999999985310               


Q ss_pred             CCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCc
Q psy10063        622 DGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDE  701 (894)
Q Consensus       622 dg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~  701 (894)
                                                                                                      
T Consensus       348 --------------------------------------------------------------------------------  347 (481)
T KOG0300|consen  348 --------------------------------------------------------------------------------  347 (481)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC
Q psy10063        702 QIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD  781 (894)
Q Consensus       702 ~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D  781 (894)
                                                                       ....+++||.+.|.++.|.-| ..+++|+.|
T Consensus       348 -------------------------------------------------~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDD  377 (481)
T KOG0300|consen  348 -------------------------------------------------QSVAVFQGHTDTVTSVVFNTD-DRVVSGSDD  377 (481)
T ss_pred             -------------------------------------------------ceeeeecccccceeEEEEecC-CceeecCCC
Confidence                                                             001256789999999999765 578999999


Q ss_pred             CcEEEEEccCCce-eec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-----cCCCCCeeEEEE
Q psy10063        782 KVSERYRDRKNKA-TAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-----KGHFGPINSLAF  853 (894)
Q Consensus       782 g~I~iwd~~~~~~-~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-----~gH~~~V~~l~f  853 (894)
                      .+|+|||++.++. +..  ....+..++.+..+..++.--...    .|+|||+... .+.+|     +||..-|.|++|
T Consensus       378 rTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNR----qvRlfDlnG~-RlaRlPrtsRqgHrRMV~c~AW  452 (481)
T KOG0300|consen  378 RTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNR----QVRLFDLNGN-RLARLPRTSRQGHRRMVTCCAW  452 (481)
T ss_pred             ceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCc----eEEEEecCCC-ccccCCcccccccceeeeeeec
Confidence            9999999998775 332  334455677777666666655555    6999999844 34333     489999999999


Q ss_pred             eeCC--cEEEEecCCCcEEEEecCcc
Q psy10063        854 HPDG--KSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       854 Spdg--~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      ..+.  .-|++||.|..+.-|.+...
T Consensus       453 ~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  453 LEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             cccCcccccccccccceeeeeEeccc
Confidence            9765  35899999999999998653

>KOG1063|consensus

Probab=99.93  E-value=1.7e-23  Score=228.30  Aligned_cols=431  Identities=14%  Similarity=0.143  Sum_probs=270.2

Q ss_pred             eEEEEEecCCCCEEEEEEccCCC---EEEEecCCCcEEEEecCCCe---------------------EE----------E
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQ---YIITGHAKGDICTWDLRMGR---------------------EL----------E  445 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~---~L~sgs~Dg~I~iWd~~tg~---------------------~~----------~  445 (894)
                      .....|.||.+.|++|+|...+.   +|+++|.|..||||.+.-+.                     .+          .
T Consensus       182 ~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea  261 (764)
T KOG1063|consen  182 ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA  261 (764)
T ss_pred             eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence            34458899999999999998655   89999999999999874322                     11          1


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------------cceEEEEEecCCCEEEEEECCCCE
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAV-------------------------EPINDMQFSKDATMFITASKDHTA  500 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------------~~V~~l~~spdg~~L~sgs~Dg~V  500 (894)
                      .+.||.+ +|.++.|+|++..|++++.|..+                         ...+...|+|++..|++-+.-|-.
T Consensus       262 ll~GHeD-WV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~  340 (764)
T KOG1063|consen  262 LLMGHED-WVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF  340 (764)
T ss_pred             hhcCccc-ceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence            2338998 99999999999999999988766                         357788899999999999999999


Q ss_pred             EEEEcCC-CcEEE--EEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe
Q psy10063        501 KLFTTHD-RQLLK--TYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI  576 (894)
Q Consensus       501 ~iwdl~~-~~~~~--~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V  576 (894)
                      ++|.-++ .....  .+. |-+.|..++|+|.|.+|++.+.|..-+++..-.+.          +...++.+-+-|...+
T Consensus       341 hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q----------~~wHEiaRPQiHGyDl  410 (764)
T KOG1063|consen  341 HLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQ----------QEWHEIARPQIHGYDL  410 (764)
T ss_pred             EEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccc----------cceeeecccccccccc
Confidence            9998333 22222  223 34889999999999999999999987765332111          1123344445688899


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCccc---c-CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeee-
Q psy10063        577 NSLAFHPDGKSYASGGEDGFLISNTLSNGLDI---S-EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFS-  651 (894)
Q Consensus       577 ~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~---~-~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~s-  651 (894)
                      .|++|-+..-.|++|.+...+|+|+.......   . .+.........|+|.-+...+-....+...  ....+..-+. 
T Consensus       411 ~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~--e~~~G~~~~~~  488 (764)
T KOG1063|consen  411 TCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPG--ETNTGGEAAVC  488 (764)
T ss_pred             eeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccc--cccccccccee
Confidence            99999986667899999999999987543210   0 010111111223332221110000000000  0000000000 


Q ss_pred             cc-ccCCCceEE--echhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063        652 GS-RVDDSGVEL--TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  728 (894)
Q Consensus       652 gs-~~~d~~i~l--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~  728 (894)
                      .. ........+  -+.++.+...              ..+..+..+.     ........+.+++.|..++..+.... 
T Consensus       489 ~et~~~~~p~~L~ePP~EdqLq~~--------------tLwPEv~KLY-----GHGyEv~~l~~s~~gnliASaCKS~~-  548 (764)
T KOG1063|consen  489 AETPLAAAPCELTEPPTEDQLQQN--------------TLWPEVHKLY-----GHGYEVYALAISPTGNLIASACKSSL-  548 (764)
T ss_pred             eecccccCchhccCCChHHHHHHh--------------ccchhhHHhc-----cCceeEEEEEecCCCCEEeehhhhCC-
Confidence            00 000000000  0111111100              0000000000     00111233566777877776553322 


Q ss_pred             cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCce
Q psy10063        729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDF  805 (894)
Q Consensus       729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~  805 (894)
                       .+...+.+|....-       .....+.+|.-.|..|+|||||+||++.++|+++.+|...+.....   .....|.++
T Consensus       549 -~ehAvI~lw~t~~W-------~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRI  620 (764)
T KOG1063|consen  549 -KEHAVIRLWNTANW-------LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRI  620 (764)
T ss_pred             -ccceEEEEEeccch-------hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceE
Confidence             34445666643211       2223578899999999999999999999999999999875443311   112344444


Q ss_pred             ----EeecCCCeEEEEecCCCCceeEEEeecCCc--ceeee--ccCCCCCeeEEEEeeCC-----cEEEEecCCCcEEEE
Q psy10063        806 ----LFDFDTTREVTTTSTKVGKFDARFYHLIFE--EEFAR--IKGHFGPINSLAFHPDG-----KSYASGGEDGFVRLH  872 (894)
Q Consensus       806 ----~fS~dg~~l~~as~d~~g~~~I~vwd~~tg--~~l~~--l~gH~~~V~~l~fSpdg-----~~LaS~s~Dg~V~vW  872 (894)
                          .|+||+.++++++.|+    .|+||.....  +.+..  ...|...|++++|.+-.     ..++.|-+-|.|.||
T Consensus       621 IWdcsW~pde~~FaTaSRDK----~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~  696 (764)
T KOG1063|consen  621 IWDCSWSPDEKYFATASRDK----KVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLW  696 (764)
T ss_pred             EEEcccCcccceeEEecCCc----eEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEE
Confidence                4899999999999998    6999999877  55544  34688999999998632     256777799999999


Q ss_pred             ecC
Q psy10063        873 TFD  875 (894)
Q Consensus       873 dl~  875 (894)
                      ...
T Consensus       697 ~~~  699 (764)
T KOG1063|consen  697 RRK  699 (764)
T ss_pred             ecc
Confidence            976

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=1.2e-23  Score=239.90  Aligned_cols=162  Identities=10%  Similarity=0.139  Sum_probs=140.6

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCe-------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGR-------ELESISGHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~-------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      .+.+|.+.|.+|+|+| ++++|++|+.|+.|+|||+..+.       .+..+.+|..                       
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~-----------------------  126 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTK-----------------------  126 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCC-----------------------
Confidence            4789999999999999 88999999999999999997653       4667777876                       


Q ss_pred             ccceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        476 VEPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       476 i~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                        .|.+|+|+|++ .+|++++.|+.|+|||++.++.+..+. |...|.+++|+|+|.+|++++.|+.             
T Consensus       127 --~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~-------------  191 (493)
T PTZ00421        127 --KVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKK-------------  191 (493)
T ss_pred             --cEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCE-------------
Confidence              68888888864 689999999999999999999988887 4678999999999999999999997             


Q ss_pred             eEEEEeccccceEEEccCCCCC-eEEEEEecCCCEEEEEe----CCCcEEEEECCC
Q psy10063        554 DARFYHLIFEEEFARIKGHFGP-INSLAFHPDGKSYASGG----EDGFLISNTLSN  604 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~-V~~l~~spdg~~l~sgs----~Dg~I~vwdl~~  604 (894)
                       |++||++.++.+..+.+|.+. +..+.|.+++..|++++    .|+.|++||++.
T Consensus       192 -IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~  246 (493)
T PTZ00421        192 -LNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK  246 (493)
T ss_pred             -EEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence             899999999999999999765 45678999888877654    478999999864

>KOG0278|consensus

Probab=99.93  E-value=2.2e-25  Score=215.56  Aligned_cols=189  Identities=17%  Similarity=0.235  Sum_probs=170.6

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---  476 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---  476 (894)
                      -..-.+.||++.|++..+..+.-+.++++.|-+.+|||..+|..++.|. |+. -|.+++|+.|..+|++|+.+..+   
T Consensus        50 dwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkh-ivk~~af~~ds~~lltgg~ekllrvf  127 (334)
T KOG0278|consen   50 DWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKH-IVKAVAFSQDSNYLLTGGQEKLLRVF  127 (334)
T ss_pred             CcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhh-eeeeEEecccchhhhccchHHHhhhh
Confidence            4555899999999999999998899999999999999999999999887 555 89999999999999999987644   


Q ss_pred             ----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        477 ----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       477 ----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                                      +.|..+.|....+.|++++.|+.||+||.++|..++.+.....|.++.++++|++|.++.+.+ 
T Consensus       128 dln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gss-  206 (334)
T KOG0278|consen  128 DLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSS-  206 (334)
T ss_pred             hccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCce-
Confidence                            689999999988999999999999999999999999999999999999999999998887766 


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                                    |++||......++.++. ...|.+..++|+..++++|++|..++.||+.+++
T Consensus       207 --------------V~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tge  257 (334)
T KOG0278|consen  207 --------------VKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGE  257 (334)
T ss_pred             --------------eEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCCc
Confidence                          89999999888877654 3468899999999999999999999999998765

>KOG0288|consensus

Probab=99.93  E-value=1.3e-25  Score=231.51  Aligned_cols=281  Identities=14%  Similarity=0.138  Sum_probs=230.9

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ....+..|.+.|..+.|-++...|++|+.|..|++|++..++  .+..|.|..+                         .
T Consensus       167 ~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g-------------------------~  221 (459)
T KOG0288|consen  167 ALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLG-------------------------N  221 (459)
T ss_pred             hhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCC-------------------------C
Confidence            344677899999999999998999999999999999998766  4566666555                         7


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      |.++.|.++++++++++.|+.+++|++..++++..+.+ .+.|.++.|......++.|+.|..              |++
T Consensus       222 it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRt--------------iK~  287 (459)
T KOG0288|consen  222 ITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRT--------------IKL  287 (459)
T ss_pred             cceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccch--------------hhh
Confidence            89999999999999999999999999999999998885 589999999988888899999887              899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      ||+....+.+.+- ....+..|+..  +..+++|..|+.||+||++......                            
T Consensus       288 WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~----------------------------  336 (459)
T KOG0288|consen  288 WDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTR----------------------------  336 (459)
T ss_pred             hhhhhhheecccc-ccccccceEec--ceeeeecccccceEEEeccCCceee----------------------------
Confidence            9999888877653 22344555554  5568899999999999986543110                            


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                                                                                      
T Consensus       337 --------------------------------------------------------------------------------  336 (459)
T KOG0288|consen  337 --------------------------------------------------------------------------------  336 (459)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                                           .+. ..+.|.++..+++|..|.+.+.|..+.+.|++..+....
T Consensus       337 -------------------------------------sv~-~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~  378 (459)
T KOG0288|consen  337 -------------------------------------SVP-LGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQT  378 (459)
T ss_pred             -------------------------------------Eee-cCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEE
Confidence                                                 000 112467888889999999999999999999998877554


Q ss_pred             ccc-------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC--CeeEEEEeeCCcEEEEecCCCc
Q psy10063        798 FLL-------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGF  868 (894)
Q Consensus       798 ~~~-------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~--~V~~l~fSpdg~~LaS~s~Dg~  868 (894)
                      +..       ....++|||++.++++|+.++    .|+||++.+|++...+.....  .|.+++|++.|.+|++++.++.
T Consensus       379 ~sA~g~k~asDwtrvvfSpd~~YvaAGS~dg----sv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~  454 (459)
T KOG0288|consen  379 FSAEGFKCASDWTRVVFSPDGSYVAAGSADG----SVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKA  454 (459)
T ss_pred             eeccccccccccceeEECCCCceeeeccCCC----cEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcc
Confidence            432       234788999999999999998    599999999999988875443  5999999999999999999999


Q ss_pred             EEEEe
Q psy10063        869 VRLHT  873 (894)
Q Consensus       869 V~vWd  873 (894)
                      +++|.
T Consensus       455 v~lW~  459 (459)
T KOG0288|consen  455 VTLWT  459 (459)
T ss_pred             eEecC
Confidence            99994

>KOG0282|consensus

Probab=99.93  E-value=1.8e-25  Score=235.02  Aligned_cols=245  Identities=15%  Similarity=0.227  Sum_probs=204.5

Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCC-CcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHD-RQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~-~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.++.|.| .+.+|++++.|+.|+||++.. +++++.|.++ .+|..++|+.+|..|++++.|+.              
T Consensus       216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~--------------  281 (503)
T KOG0282|consen  216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRF--------------  281 (503)
T ss_pred             ccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeeccee--------------
Confidence            788888888 889999999999999999986 8999999865 78999999999999999999997              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i  633 (894)
                      |++||.++|+++..+.. ...+.|+.|+||+ ..|++|+.|+.|+.||++.++.++                        
T Consensus       282 lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvq------------------------  336 (503)
T KOG0282|consen  282 LKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQ------------------------  336 (503)
T ss_pred             eeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHH------------------------
Confidence            99999999999998853 3468999999998 789999999999999998764221                        


Q ss_pred             EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063        634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN  713 (894)
Q Consensus       634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s  713 (894)
                                                                                                      
T Consensus       337 --------------------------------------------------------------------------------  336 (503)
T KOG0282|consen  337 --------------------------------------------------------------------------------  336 (503)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCc
Q psy10063        714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNK  793 (894)
Q Consensus       714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~  793 (894)
                                                               .+..|.+.|..|.|-++++++++.+.|+.|+||+.+...
T Consensus       337 -----------------------------------------eYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v  375 (503)
T KOG0282|consen  337 -----------------------------------------EYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPV  375 (503)
T ss_pred             -----------------------------------------HHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCc
Confidence                                                     112355667889999999999999999999999988766


Q ss_pred             eeeccc----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc---ceeeeccCCCC--CeeEEEEeeCCcEEEEec
Q psy10063        794 ATAGFL----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFG--PINSLAFHPDGKSYASGG  864 (894)
Q Consensus       794 ~~~~~~----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg---~~l~~l~gH~~--~V~~l~fSpdg~~LaS~s  864 (894)
                      .+.-+.    ...+.+..+|.+.++++-+.+.    .|.||.+...   ..-.+++||.-  .-..|.|||||++|++|+
T Consensus       376 ~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN----~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd  451 (503)
T KOG0282|consen  376 PIKNIADPEMHTMPCLTLHPNGKWFAAQSMDN----YIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD  451 (503)
T ss_pred             cchhhcchhhccCcceecCCCCCeehhhccCc----eEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeec
Confidence            544332    3456788999999999877776    5888886533   22356778863  355789999999999999


Q ss_pred             CCCcEEEEecCccccccccccC
Q psy10063        865 EDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       865 ~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      .||.|.+||....+++.+++..
T Consensus       452 sdG~v~~wdwkt~kl~~~lkah  473 (503)
T KOG0282|consen  452 SDGKVNFWDWKTTKLVSKLKAH  473 (503)
T ss_pred             CCccEEEeechhhhhhhccccC
Confidence            9999999999999988888765

>KOG4283|consensus

Probab=99.93  E-value=4.2e-24  Score=211.09  Aligned_cols=308  Identities=19%  Similarity=0.236  Sum_probs=228.2

Q ss_pred             ecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEE---EEecCCCCCCeeEEE-EcCCCCEEEEEeCCCCccceE
Q psy10063        406 TDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGREL---ESISGHAKEPINDMQ-FSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       406 ~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~---~~l~~h~~~~V~~v~-~spdg~~la~~~~d~~i~~V~  480 (894)
                      +.|.+.|.+|.+.+ .|+|+++|+.||.|.|||++.....   ..+..|.    ..|+ -++++...          .|.
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~----c~v~~~h~~~Hky----------~is  105 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHK----CIVAKQHENGHKY----------AIS  105 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceehee----eeccccCCcccee----------eee
Confidence            46999999999998 7899999999999999999754311   0000010    0000 12222222          688


Q ss_pred             EEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCC--EEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        481 DMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILP--HVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~--~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      ++.|-| |...|.+++.|++|+|||..+.+....|..++.|++-+|||-..  .|++++.++.             .|++
T Consensus       106 s~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~-------------~VrL  172 (397)
T KOG4283|consen  106 SAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDV-------------QVRL  172 (397)
T ss_pred             eeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCC-------------cEEE
Confidence            889988 77789999999999999999999999999999999999998543  4444454443             2999


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCE-EEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      -|+++|.+-+.|.||.+.|.++.|+|..++ |++|+.||.|++||++..                        .|+...+
T Consensus       173 CDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra------------------------sgcf~~l  228 (397)
T KOG4283|consen  173 CDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA------------------------SGCFRVL  228 (397)
T ss_pred             EeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecc------------------------cceeEEe
Confidence            999999999999999999999999998775 778999999999998642                        1222222


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                      +.+...                                                                          
T Consensus       229 D~hn~k--------------------------------------------------------------------------  234 (397)
T KOG4283|consen  229 DQHNTK--------------------------------------------------------------------------  234 (397)
T ss_pred             ecccCc--------------------------------------------------------------------------
Confidence            211100                                                                          


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA  796 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~  796 (894)
                                                      ....++.-..|.+.|..++|..|+.+|++.+.|..+++|...+++...
T Consensus       235 --------------------------------~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl  282 (397)
T KOG4283|consen  235 --------------------------------RPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTL  282 (397)
T ss_pred             --------------------------------cCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcccc
Confidence                                            000001224588889999999999999999999999999988776532


Q ss_pred             ccccC-------CCce-EeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCc
Q psy10063        797 GFLLS-------CPDF-LFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF  868 (894)
Q Consensus       797 ~~~~~-------~~~~-~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~  868 (894)
                      .....       +..+ .-+.+...++..-.++    .+.|+.+-.|..++.|.+|...|.|.+|-++-+.+.+++.|+.
T Consensus       283 ~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~----~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~n  358 (397)
T KOG4283|consen  283 REFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDG----SLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGN  358 (397)
T ss_pred             cccccccccccccceEEEeecccceEEEEecCC----eEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCc
Confidence            22111       1111 1133444444333332    5899999999999999999999999999999999999999999


Q ss_pred             EEEEec
Q psy10063        869 VRLHTF  874 (894)
Q Consensus       869 V~vWdl  874 (894)
                      |..|-.
T Consensus       359 i~~w~p  364 (397)
T KOG4283|consen  359 IYMWSP  364 (397)
T ss_pred             cccccc
Confidence            999987

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.93  E-value=3e-23  Score=225.60  Aligned_cols=276  Identities=12%  Similarity=0.040  Sum_probs=206.9

Q ss_pred             CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEE-EEEECCCC
Q psy10063        421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMF-ITASKDHT  499 (894)
Q Consensus       421 g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L-~sgs~Dg~  499 (894)
                      ++++++++.|+.|++||+.+++.++.+..+..                          +.+++|+|+|++| ++++.++.
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~--------------------------~~~l~~~~dg~~l~~~~~~~~~   54 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR--------------------------PRGITLSKDGKLLYVCASDSDT   54 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEEEECCCC--------------------------CCceEECCCCCEEEEEECCCCe
Confidence            35788999999999999999998888876543                          5567788888766 55667899


Q ss_pred             EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEE
Q psy10063        500 AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS  578 (894)
Q Consensus       500 V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~  578 (894)
                      |++||+..++.+..+..+..+..++|+|+++.|++++. ++.              |++||+..++.+..+.. ...+.+
T Consensus        55 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~--------------l~~~d~~~~~~~~~~~~-~~~~~~  119 (300)
T TIGR03866        55 IQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNL--------------VTVIDIETRKVLAEIPV-GVEPEG  119 (300)
T ss_pred             EEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCe--------------EEEEECCCCeEEeEeeC-CCCcce
Confidence            99999999998887776666788999999998887765 443              89999998887777653 334688


Q ss_pred             EEEecCCCEEEEEeCCCc-EEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCC
Q psy10063        579 LAFHPDGKSYASGGEDGF-LISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDD  657 (894)
Q Consensus       579 l~~spdg~~l~sgs~Dg~-I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d  657 (894)
                      ++|+|+|++|++++.++. +++||...++.+.                         .+                     
T Consensus       120 ~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~-------------------------~~---------------------  153 (300)
T TIGR03866       120 MAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD-------------------------NV---------------------  153 (300)
T ss_pred             EEECCCCCEEEEEecCCCeEEEEeCCCCeEEE-------------------------EE---------------------
Confidence            999999999998887654 5566764321000                         00                     


Q ss_pred             CceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCccee
Q psy10063        658 SGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMT  737 (894)
Q Consensus       658 ~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~  737 (894)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (300)
T TIGR03866       154 --------------------------------------------------------------------------------  153 (300)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe-cCCCcEEEEEccCCceeecccc----------CCCceE
Q psy10063        738 WGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA-LADKVSERYRDRKNKATAGFLL----------SCPDFL  806 (894)
Q Consensus       738 ~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg-s~Dg~I~iwd~~~~~~~~~~~~----------~~~~~~  806 (894)
                                        .  ......+++|++++++|+++ ..++.|++||+.+++.+..+..          ....++
T Consensus       154 ------------------~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~  213 (300)
T TIGR03866       154 ------------------L--VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIK  213 (300)
T ss_pred             ------------------E--cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceE
Confidence                              0  00012357788999988654 4689999999998876544321          123577


Q ss_pred             eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEe-cCCCcEEEEecCcccccccccc
Q psy10063        807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       807 fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~-s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      |++++++++++.++..   .|.+||+++++++..+. +...+.+|+|+|+|++|+++ +.+|.|+|||++.++.+..+++
T Consensus       214 ~s~dg~~~~~~~~~~~---~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~  289 (300)
T TIGR03866       214 LTKDGKTAFVALGPAN---RVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV  289 (300)
T ss_pred             ECCCCCEEEEEcCCCC---eEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence            9999999776654432   59999999888876553 44579999999999999886 5799999999999998888876


Q ss_pred             Cc
Q psy10063        886 SE  887 (894)
Q Consensus       886 ~~  887 (894)
                      .+
T Consensus       290 ~~  291 (300)
T TIGR03866       290 GR  291 (300)
T ss_pred             cc
Confidence            43

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0274|consensus

Probab=99.93  E-value=1.2e-23  Score=239.93  Aligned_cols=255  Identities=15%  Similarity=0.189  Sum_probs=206.3

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.||.+.|.+++|..-+.+|++|+.|.+++|||+.+|++.+.|.+|..                         .|.+|.
T Consensus       244 ~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~s-------------------------tv~~~~  298 (537)
T KOG0274|consen  244 RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTS-------------------------SVRCLT  298 (537)
T ss_pred             eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCc-------------------------eEEEEE
Confidence            4999999999999998788999999999999999999999999999998                         555555


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      ..  +.++++|+.|.+|++|++..++++..+. |.+.|.++.+.  +.+|++|+.++.              |++||+..
T Consensus       299 ~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~--------------v~VW~~~~  360 (537)
T KOG0274|consen  299 ID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGT--------------VKVWDPRT  360 (537)
T ss_pred             cc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCce--------------EEEEEhhh
Confidence            43  4578889999999999999999999999 78999999998  889999999996              89999999


Q ss_pred             cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC-ccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063        563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG-LDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST  641 (894)
Q Consensus       563 ~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~-~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~  641 (894)
                      +++++.+.||.+.|.++.+... .++++|+.|+.|++||++.. +.+                                 
T Consensus       361 ~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~---------------------------------  406 (537)
T KOG0274|consen  361 GKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCI---------------------------------  406 (537)
T ss_pred             ceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhh---------------------------------
Confidence            9999999999999999988654 89999999999999999764 211                                 


Q ss_pred             CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063        642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV  721 (894)
Q Consensus       642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v  721 (894)
                                                                                                      
T Consensus       407 --------------------------------------------------------------------------------  406 (537)
T KOG0274|consen  407 --------------------------------------------------------------------------------  406 (537)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccC
Q psy10063        722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLS  801 (894)
Q Consensus       722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~  801 (894)
                                                      ..+.+|...+.++.  ..+++|++++.|+.|++||...+++++.+...
T Consensus       407 --------------------------------~tl~~h~~~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~  452 (537)
T KOG0274|consen  407 --------------------------------HTLQGHTSLVSSLL--LRDNFLVSSSADGTIKLWDAEEGECLRTLEGR  452 (537)
T ss_pred             --------------------------------hhhcCCcccccccc--cccceeEeccccccEEEeecccCceeeeeccC
Confidence                                            11223333333222  34689999999999999999999998877763


Q ss_pred             -CCceEeecCC-CeEEEEecCCCCceeEEEeecCCcceeeeccCCC-CCeeEEEE
Q psy10063        802 -CPDFLFDFDT-TREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-GPINSLAF  853 (894)
Q Consensus       802 -~~~~~fS~dg-~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-~~V~~l~f  853 (894)
                       +..+.+-..+ ..+++++.++    .+++||++.+++++.+-.+. .....+++
T Consensus       453 ~~~~v~~l~~~~~~il~s~~~~----~~~l~dl~~~~~~~~l~~~~~~~~~~~~~  503 (537)
T KOG0274|consen  453 HVGGVSALALGKEEILCSSDDG----SVKLWDLRSGTLIRTLLSTDLGATWGVAP  503 (537)
T ss_pred             CcccEEEeecCcceEEEEecCC----eeEEEecccCchhhhhhhccccccccccc
Confidence             3444433333 5666666666    69999999999988775444 33333444

>KOG0639|consensus

Probab=99.92  E-value=1.6e-23  Score=219.99  Aligned_cols=285  Identities=14%  Similarity=0.158  Sum_probs=220.6

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      ....|.+.|.++.+|..-+++++|+. |.|+|||+...       +.+. +|..+.....+.            .|+++.
T Consensus       414 ~tL~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~p-------g~k~-PvsqLdcl~rdn------------yiRSck  472 (705)
T KOG0639|consen  414 NTLAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQP-------GNKS-PVSQLDCLNRDN------------YIRSCK  472 (705)
T ss_pred             hhhccCcEEEEEEecCCcceeEecCC-CeEEEeeccCC-------CCCC-ccccccccCccc------------ceeeeE
Confidence            44579999999999999999999986 67999998754       2222 444443332221            689999


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--C-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYT--T-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      +.|||+.|++|++-.+|.|||+.........+  . .-..++|+.+||.+.+++++.+|.              |+|||+
T Consensus       473 L~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGn--------------I~vwDL  538 (705)
T KOG0639|consen  473 LLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGN--------------IAVWDL  538 (705)
T ss_pred             ecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCc--------------EEEEEc
Confidence            99999999999999999999998655443333  2 245789999999999999999997              899999


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      .....++.|+||.+.+.||.+++||..|.+|+.|.+||.||++.++++.+..                            
T Consensus       539 hnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd----------------------------  590 (705)
T KOG0639|consen  539 HNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD----------------------------  590 (705)
T ss_pred             ccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh----------------------------
Confidence            9999999999999999999999999999999999999999998765432100                            


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       591 --------------------------------------------------------------------------------  590 (705)
T KOG0639|consen  591 --------------------------------------------------------------------------------  590 (705)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--eecc
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA--TAGF  798 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~--~~~~  798 (894)
                                                            ....|+++.++|.+.+||+|-..+.+.|......+.  +..+
T Consensus       591 --------------------------------------F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlh  632 (705)
T KOG0639|consen  591 --------------------------------------FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLH  632 (705)
T ss_pred             --------------------------------------hhhhheecccCCCccceeeecccCcEEEEecCCccceeeccc
Confidence                                                  012345556667777777777777776666544333  2333


Q ss_pred             ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      ...+-++.|++.|+++++.+.|.    -+.+|...-|..+...+ ....|.++.+|.|.+|||+|+.|++..||.+
T Consensus       633 eScVLSlKFa~cGkwfvStGkDn----lLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  633 ESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             ccEEEEEEecccCceeeecCchh----hhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            33344566777777777777775    37889988888776665 4578999999999999999999999999976

>KOG1539|consensus

Probab=99.92  E-value=3e-22  Score=222.77  Aligned_cols=418  Identities=16%  Similarity=0.137  Sum_probs=265.7

Q ss_pred             EEEEEEccCC--CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------
Q psy10063        412 ITSLLWGNLD--QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------------  476 (894)
Q Consensus       412 V~~l~~spdg--~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------  476 (894)
                      |.+| ++|+-  ..|+.|+.+|.++||++++++.+++++++.. .|.++.-+|-=..+|.|..+|.+             
T Consensus       162 Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s-~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~s  239 (910)
T KOG1539|consen  162 ITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFS-RITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMS  239 (910)
T ss_pred             eeeE-ecchhheeeEEEeecCCcEEEEEeccCcEEEEeccccc-ceeEeccCCcceEEEEeccCceEEEEEcccCcEEEE
Confidence            6666 45542  4788999999999999999999999999997 99999999999999999999987             


Q ss_pred             -----cceEEEEEecCCCEE-EEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        477 -----EPINDMQFSKDATMF-ITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       477 -----~~V~~l~~spdg~~L-~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                           +.|.+++|.-||..+ ++|+..|.+.+||++..+++..+.  |.+.|..+.|.+....|++++.|...++|.++.
T Consensus       240 Fk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~  319 (910)
T KOG1539|consen  240 FKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDS  319 (910)
T ss_pred             EEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeC
Confidence                 689999999999854 555666999999999998887776  458899999999999999999999876654442


Q ss_pred             ccceeeEEEEeccccceEEEccCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEECCCCccccC-----------------
Q psy10063        549 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH-PDGKSYASGGEDGFLISNTLSNGLDISE-----------------  610 (894)
Q Consensus       549 ~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~~~~~~-----------------  610 (894)
                      ..+.          .+.++.-.||..+..||.|. .+|.++.+++.|+.++.+++.....-++                 
T Consensus       320 ~dg~----------pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~  389 (910)
T KOG1539|consen  320 GDGV----------PRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFS  389 (910)
T ss_pred             CCCc----------chheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccc
Confidence            2221          14556667999999999998 6788999999999999987743221100                 


Q ss_pred             -----CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhccccc----CCC
Q psy10063        611 -----GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSIN----HSG  681 (894)
Q Consensus       611 -----~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~----~~g  681 (894)
                           ...+..+++.-         .+...|.          -++..+ ..+.....|..+.....+..+...    .+.
T Consensus       390 ~~~~k~p~i~~fa~~~---------~RE~~W~----------Nv~~~h-~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~  449 (910)
T KOG1539|consen  390 TEKLKLPPIVEFAFEN---------AREKEWD----------NVITAH-KGKRSAYTWNFRNKTSGRHVLDPKRFKKDDI  449 (910)
T ss_pred             hhhhcCCcceeeeccc---------chhhhhc----------ceeEEe-cCcceEEEEeccCcccccEEecCccccccCc
Confidence                 01111111111         0001110          011111 122222333322111100000000    001


Q ss_pred             CeEEeecc-CCc-ceeEeccCcceeE-----EeeeEEE----cCCCCEEEecccCccc----cccCCcceeeccccCccc
Q psy10063        682 TRLHVNPF-DEQ-QSVELTKDEQIEM-----ARNRMSI----NHSGTRLHVNPFDEQQ----SVDASPLMTWGHIEGTPF  746 (894)
Q Consensus       682 ~~~~~~~~-~~~-~~~~~s~~~~~~~-----~~~~~~~----s~~g~~l~v~~~~~~~----~~~~~~l~~~~~~~g~~~  746 (894)
                      ....+... .+- ..+..+. +.+..     ...+.+|    .+++.+..+.......    ......++.|+.......
T Consensus       450 ~~~av~vs~CGNF~~IG~S~-G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~  528 (910)
T KOG1539|consen  450 NATAVCVSFCGNFVFIGYSK-GTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK  528 (910)
T ss_pred             ceEEEEEeccCceEEEeccC-CeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee
Confidence            11110000 000 0000000 00000     0011111    1222222221111110    001122555644333211


Q ss_pred             ccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc---cCCCceEeecCCCeEEEEecCCCC
Q psy10063        747 KLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL---LSCPDFLFDFDTTREVTTTSTKVG  823 (894)
Q Consensus       747 ~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---~~~~~~~fS~dg~~l~~as~d~~g  823 (894)
                              .-..-...+.++.++.....||.+..|-.|+++|..+.+.++.+.   ..+.+++||+||++|++++.|+  
T Consensus       529 --------~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~--  598 (910)
T KOG1539|consen  529 --------KSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS--  598 (910)
T ss_pred             --------eeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC--
Confidence                    011123456677788888999999999999999999887765544   5567889999999999999998  


Q ss_pred             ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC-CcEEEEecC
Q psy10063        824 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-GFVRLHTFD  875 (894)
Q Consensus       824 ~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D-g~V~vWdl~  875 (894)
                        .|++||+.++.++..+.. ..++.+|.|||.|.+||+...| .-|++|.=.
T Consensus       599 --tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~LAT~Hvd~~gIylWsNk  648 (910)
T KOG1539|consen  599 --TIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK  648 (910)
T ss_pred             --cEEEEeccCcceeeeEec-CCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence              699999999999987754 4677899999999999999998 579999744

>KOG0294|consensus

Probab=99.92  E-value=3.1e-23  Score=207.38  Aligned_cols=233  Identities=16%  Similarity=0.205  Sum_probs=192.1

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCC--EEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILP--HVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~--~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.+++.+  |.++|+|+.|.+|+|||++..+.+..+- |.+.|.++.|.+.-.  +|++|+.||.              
T Consensus        45 sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~--------------  108 (362)
T KOG0294|consen   45 SITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH--------------  108 (362)
T ss_pred             ceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCc--------------
Confidence            77888774  8899999999999999999888777665 568999999999876  9999999997              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      |.+|+....+++..+++|.+.|..|+++|.|++.++.+.|+.+++|++-.++..                          
T Consensus       109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a--------------------------  162 (362)
T KOG0294|consen  109 IIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA--------------------------  162 (362)
T ss_pred             EEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc--------------------------
Confidence            888999999999999999999999999999999999999999999998654310                          


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                      .+.                       .                                                     
T Consensus       163 ~v~-----------------------~-----------------------------------------------------  166 (362)
T KOG0294|consen  163 FVL-----------------------N-----------------------------------------------------  166 (362)
T ss_pred             eee-----------------------c-----------------------------------------------------
Confidence            000                       0                                                     


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                                -.+  ....+.|+|.|.+++++..++ |-+|.++..+.
T Consensus       167 ------------------------------------------L~~--~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v  201 (362)
T KOG0294|consen  167 ------------------------------------------LKN--KATLVSWSPQGDHFVVSGRNK-IDIYQLDNASV  201 (362)
T ss_pred             ------------------------------------------cCC--cceeeEEcCCCCEEEEEeccE-EEEEecccHhH
Confidence                                                      000  112367889999999888877 88999888777


Q ss_pred             eeccccCCCceEe-ecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEe--eCCcEEEEecCCCcEEE
Q psy10063        795 TAGFLLSCPDFLF-DFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH--PDGKSYASGGEDGFVRL  871 (894)
Q Consensus       795 ~~~~~~~~~~~~f-S~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fS--pdg~~LaS~s~Dg~V~v  871 (894)
                      +..+......++. ..++..|+++..++    .|.+||...+.++..+.+|..+|.++.+-  |++.||+++|.||.|+|
T Consensus       202 ~~~i~~~~r~l~~~~l~~~~L~vG~d~~----~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~v  277 (362)
T KOG0294|consen  202 FREIENPKRILCATFLDGSELLVGGDNE----WISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKV  277 (362)
T ss_pred             hhhhhccccceeeeecCCceEEEecCCc----eEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEE
Confidence            7666665544443 44677788877776    59999999999999999999999999853  67899999999999999


Q ss_pred             EecCcc
Q psy10063        872 HTFDQA  877 (894)
Q Consensus       872 Wdl~~~  877 (894)
                      ||++..
T Consensus       278 Wd~~~~  283 (362)
T KOG0294|consen  278 WDIDME  283 (362)
T ss_pred             EEcccc
Confidence            999877

>PTZ00421 coronin; Provisional

Probab=99.92  E-value=7.9e-23  Score=233.13  Aligned_cols=172  Identities=16%  Similarity=0.134  Sum_probs=131.6

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-  486 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-  486 (894)
                      |-..|....+++|+..+++++.+..+..|+...|..+..+....  .+.      +...++.    ++-+.|.+++|+| 
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G--~~~------~~~~~l~----GH~~~V~~v~fsP~   86 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYG--KLA------SNPPILL----GQEGPIIDVAFNPF   86 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccc--cCC------CCCceEe----CCCCCEEEEEEcCC
Confidence            34556677777888888888888888889876554332221110  000      0000111    1123799999999 


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCc-------EEEEEe-CCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQ-------LLKTYT-TERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~-------~~~~~~-~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      ++.+|++|+.|+.|+|||+..+.       ++..+. |...|.+++|+|++ .+|++++.|+.              |++
T Consensus        87 d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt--------------VrI  152 (493)
T PTZ00421         87 DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV--------------VNV  152 (493)
T ss_pred             CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE--------------EEE
Confidence            88999999999999999997653       345555 46889999999986 68889998886              899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ||+..++.+..+.+|...|.+|+|+++|.+|++++.||.|+|||++.+
T Consensus       153 WDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg  200 (493)
T PTZ00421        153 WDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDG  200 (493)
T ss_pred             EECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCC
Confidence            999999999999999999999999999999999999999999998754

>KOG2106|consensus

Probab=99.92  E-value=2.8e-22  Score=211.31  Aligned_cols=298  Identities=14%  Similarity=0.167  Sum_probs=229.3

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------  476 (894)
                      ..|.|++|.++|+ +++|..+|.|.||+....+..+....|.+ .|.+++...+|.+|- |+.|..+             
T Consensus       247 k~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~g-gv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~  323 (626)
T KOG2106|consen  247 KFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDG-GVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRET  323 (626)
T ss_pred             eEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCC-ceEEEEEecCccEee-cCccceEEeccccccccccc
Confidence            7799999999985 78999999999999988888777779998 999999999998776 8887766             


Q ss_pred             ---------------------------------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE
Q psy10063        477 ---------------------------------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL  511 (894)
Q Consensus       477 ---------------------------------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~  511 (894)
                                                                   ...+.++.+|+..+|++|+.|+.|+||+  +.+++
T Consensus       324 elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~  401 (626)
T KOG2106|consen  324 ELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLE  401 (626)
T ss_pred             cCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCcee
Confidence                                                         4678889999999999999999999999  67777


Q ss_pred             EEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE
Q psy10063        512 KTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG  591 (894)
Q Consensus       512 ~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg  591 (894)
                      .......++.|+.|+|.| .|++|...|.              ..+.|.++...+..- ....++.+++|+|+|.+||.|
T Consensus       402 wt~~~~d~~~~~~fhpsg-~va~Gt~~G~--------------w~V~d~e~~~lv~~~-~d~~~ls~v~ysp~G~~lAvg  465 (626)
T KOG2106|consen  402 WTKIIEDPAECADFHPSG-VVAVGTATGR--------------WFVLDTETQDLVTIH-TDNEQLSVVRYSPDGAFLAVG  465 (626)
T ss_pred             EEEEecCceeEeeccCcc-eEEEeeccce--------------EEEEecccceeEEEE-ecCCceEEEEEcCCCCEEEEe
Confidence            777788999999999999 9999998886              667788775555443 348899999999999999999


Q ss_pred             eCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHh
Q psy10063        592 GEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMA  671 (894)
Q Consensus       592 s~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~  671 (894)
                      +.|+.|+||.++.....                 +        ...                                  
T Consensus       466 s~d~~iyiy~Vs~~g~~-----------------y--------~r~----------------------------------  486 (626)
T KOG2106|consen  466 SHDNHIYIYRVSANGRK-----------------Y--------SRV----------------------------------  486 (626)
T ss_pred             cCCCeEEEEEECCCCcE-----------------E--------EEe----------------------------------
Confidence            99999999987543210                 0        000                                  


Q ss_pred             hhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCC
Q psy10063        672 RNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGS  751 (894)
Q Consensus       672 ~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~  751 (894)
                                                                                                      
T Consensus       487 --------------------------------------------------------------------------------  486 (626)
T KOG2106|consen  487 --------------------------------------------------------------------------------  486 (626)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec--------------cc-------cCCCceEeecC
Q psy10063        752 DTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG--------------FL-------LSCPDFLFDFD  810 (894)
Q Consensus       752 ~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~--------------~~-------~~~~~~~fS~d  810 (894)
                        ....+  ..|..+.||+|+++|.+-+.|-.|..|.....+....              +.       ..+..++-+.+
T Consensus       487 --~k~~g--s~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~  562 (626)
T KOG2106|consen  487 --GKCSG--SPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHC  562 (626)
T ss_pred             --eeecC--ceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhh
Confidence              01111  4577788888888888888888888884222222111              10       01112334555


Q ss_pred             CCeEEEEecCCCCceeEEEeecCCc---ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        811 TTREVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       811 g~~l~~as~d~~g~~~I~vwd~~tg---~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      .+.++++...+    .|+||...-.   ....++.+|++.|.+|+|..+...|++.+.|-+|..|++.
T Consensus       563 ~~~lA~gdd~g----~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~lv  626 (626)
T KOG2106|consen  563 EKLLASGDDFG----KVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRLV  626 (626)
T ss_pred             hhhhhccccCc----eEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEeC
Confidence            66665554443    5899887543   3446678999999999999999999999999999999973

>PTZ00420 coronin; Provisional

Probab=99.92  E-value=1.7e-22  Score=231.24  Aligned_cols=165  Identities=12%  Similarity=0.089  Sum_probs=138.9

Q ss_pred             EEEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCCCe--------EEEEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063        401 VKMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRMGR--------ELESISGHAKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~tg~--------~~~~l~~h~~~~V~~v~~spdg~~la~~~  471 (894)
                      ....+.+|.+.|.+|+|+|+ +.+|++|+.||.|+|||+..+.        .+..+.+|..                   
T Consensus        66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~-------------------  126 (568)
T PTZ00420         66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK-------------------  126 (568)
T ss_pred             eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC-------------------
Confidence            34568899999999999997 7899999999999999997642        2334555655                   


Q ss_pred             CCCCccceEEEEEecCCCE-EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063        472 HSQAVEPINDMQFSKDATM-FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       472 ~d~~i~~V~~l~~spdg~~-L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~  550 (894)
                            .|.+|+|+|++.. |++++.|+.|+|||++.++.+..+.+...|.+++|+++|.+|++++.++.          
T Consensus       127 ------~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~----------  190 (568)
T PTZ00420        127 ------KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKH----------  190 (568)
T ss_pred             ------cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCE----------
Confidence                  7888888888765 57899999999999999998888888888999999999999999988886          


Q ss_pred             ceeeEEEEeccccceEEEccCCCCCeEE-----EEEecCCCEEEEEeCCC----cEEEEECCC
Q psy10063        551 GKFDARFYHLIFEEEFARIKGHFGPINS-----LAFHPDGKSYASGGEDG----FLISNTLSN  604 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h~~~V~~-----l~~spdg~~l~sgs~Dg----~I~vwdl~~  604 (894)
                          |++||++.++.+..+.+|.+.+.+     ..|++++.+|++++.|+    .|+|||++.
T Consensus       191 ----IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~  249 (568)
T PTZ00420        191 ----MHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN  249 (568)
T ss_pred             ----EEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence                999999999999999999876543     33458889999988774    799999864

>KOG0277|consensus

Probab=99.92  E-value=9.8e-24  Score=204.97  Aligned_cols=166  Identities=19%  Similarity=0.355  Sum_probs=136.8

Q ss_pred             eEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCC-CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRM-GRELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~t-g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      .....-..-.+.+..|+|++.. ..+++++.||.++|||+.. .++++.+++|+.                         
T Consensus        51 i~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~-------------------------  105 (311)
T KOG0277|consen   51 IQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKR-------------------------  105 (311)
T ss_pred             eEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhh-------------------------
Confidence            3333444567889999999854 5888899999999999643 457899999998                         


Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCC-CCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPI-LPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.++.|.+ +++.++++|.|++||||+...++-+++|.+ ...|+..+|+|. ...++++++|+.              
T Consensus       106 EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~--------------  171 (311)
T KOG0277|consen  106 EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGT--------------  171 (311)
T ss_pred             heEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCce--------------
Confidence            677777776 567788889999999999999999999986 478999999996 567788888887              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +++||++.......+..|...|.|+.|+. +...|++|+.|+.||+||++.
T Consensus       172 l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~  222 (311)
T KOG0277|consen  172 LRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRN  222 (311)
T ss_pred             EEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhh
Confidence            88999876544445889999999999997 566899999999999999964

>KOG1407|consensus

Probab=99.92  E-value=6.7e-23  Score=200.00  Aligned_cols=261  Identities=14%  Similarity=0.129  Sum_probs=216.2

Q ss_pred             CccceeeeeccCccEEEecCCCeE-------------EEEEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeE
Q psy10063        378 LSVDRLNSMSPAARKLATNAEPVV-------------KMQVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRE  443 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~~~-------------~~~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~  443 (894)
                      ....+.++|..||+.|+.++-+..             ....++|.+.|-.++|+| ...+|++++.|..|++||++.+++
T Consensus        20 ~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~   99 (313)
T KOG1407|consen   20 VQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKC   99 (313)
T ss_pred             hhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcE
Confidence            344556677888888877654321             125668999999999998 456999999999999999999999


Q ss_pred             EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEE
Q psy10063        444 LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSA  523 (894)
Q Consensus       444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l  523 (894)
                      ...+....+                          =.-+.|+|+|++++.+..|..|.+.|.++.+.+...+....+.-+
T Consensus       100 ~~~i~~~~e--------------------------ni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~  153 (313)
T KOG1407|consen  100 TARIETKGE--------------------------NINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEI  153 (313)
T ss_pred             EEEeeccCc--------------------------ceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeee
Confidence            988876554                          335789999999999999999999999999999988888889999


Q ss_pred             EEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        524 ALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      +|+-++..++...+.|.              |.|..+..-+.+..++.|.....||.|+|+|+||++|+.|..+.+||++
T Consensus       154 ~w~~~nd~Fflt~GlG~--------------v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~  219 (313)
T KOG1407|consen  154 SWNNSNDLFFLTNGLGC--------------VEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD  219 (313)
T ss_pred             eecCCCCEEEEecCCce--------------EEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChh
Confidence            99998998888888887              5666666788899999999999999999999999999999999999985


Q ss_pred             CCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCe
Q psy10063        604 NGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTR  683 (894)
Q Consensus       604 ~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~  683 (894)
                      ....+                                                                           
T Consensus       220 ELiC~---------------------------------------------------------------------------  224 (313)
T KOG1407|consen  220 ELICE---------------------------------------------------------------------------  224 (313)
T ss_pred             Hhhhh---------------------------------------------------------------------------
Confidence            32100                                                                           


Q ss_pred             EEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCce
Q psy10063        684 LHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIG  763 (894)
Q Consensus       684 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v  763 (894)
                                                                                            +.+..+.-.|
T Consensus       225 ----------------------------------------------------------------------R~isRldwpV  234 (313)
T KOG1407|consen  225 ----------------------------------------------------------------------RCISRLDWPV  234 (313)
T ss_pred             ----------------------------------------------------------------------eeeccccCce
Confidence                                                                                  1122234467


Q ss_pred             EEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCC--CceEeecCCCeEEEEecCCCC
Q psy10063        764 FKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSC--PDFLFDFDTTREVTTTSTKVG  823 (894)
Q Consensus       764 ~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~--~~~~fS~dg~~l~~as~d~~g  823 (894)
                      ..|.|+.||++||+|++|..|-|-+++++..+.++....  ..++|.|....|+.+..++.+
T Consensus       235 RTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~  296 (313)
T KOG1407|consen  235 RTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDG  296 (313)
T ss_pred             EEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecCCCC
Confidence            889999999999999999999999999999988876544  478899999999999998765

>KOG0275|consensus

Probab=99.92  E-value=1.9e-24  Score=215.44  Aligned_cols=244  Identities=13%  Similarity=0.144  Sum_probs=204.9

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---------CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---------TERPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                      .+.|..|+|||++|++|+.||.|.||+..+|++.+.++         ++..|.|++|+.|...|++|+.||.        
T Consensus       215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGk--------  286 (508)
T KOG0275|consen  215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGK--------  286 (508)
T ss_pred             chhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCc--------
Confidence            68899999999999999999999999999998876544         3578999999999999999999997        


Q ss_pred             ccceeeEEEEeccccceEEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        549 KVGKFDARFYHLIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       549 ~~~~~~v~vwd~~~~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                            |++|.+++|.++++|. .|...|.|+.|+.|+..|++++.|..+||.-+..++.                    
T Consensus       287 ------IKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~--------------------  340 (508)
T KOG0275|consen  287 ------IKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKC--------------------  340 (508)
T ss_pred             ------EEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchh--------------------
Confidence                  8999999999999996 8999999999999999999999999999876654432                    


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                                                                                                      
T Consensus       341 --------------------------------------------------------------------------------  340 (508)
T KOG0275|consen  341 --------------------------------------------------------------------------------  340 (508)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                                                                   ++.+.||...|....|.+||.++++++.||+|++|
T Consensus       341 ---------------------------------------------LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW  375 (508)
T KOG0275|consen  341 ---------------------------------------------LKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVW  375 (508)
T ss_pred             ---------------------------------------------HHHhcCccccccceEEcCCCCeEEEecCCccEEEe
Confidence                                                         22356788889999999999999999999999999


Q ss_pred             EccCCceeeccccCC-----CceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCC---CCCeeEEEEeeCCc
Q psy10063        788 RDRKNKATAGFLLSC-----PDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---FGPINSLAFHPDGK  858 (894)
Q Consensus       788 d~~~~~~~~~~~~~~-----~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH---~~~V~~l~fSpdg~  858 (894)
                      +.++.+++..+....     ..+.+-| ....++++-...    .|+|..+. |+.++.+...   .+..-+.++||.|.
T Consensus       376 ~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsn----tv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGe  450 (508)
T KOG0275|consen  376 HGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSN----TVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGE  450 (508)
T ss_pred             cCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCC----eEEEEecc-ceEEeeeccCCccCCceEEEEecCCCc
Confidence            999999877766433     3344333 455666666555    58999986 7888777532   34455788999999


Q ss_pred             EEEEecCCCcEEEEecCcccccccccc
Q psy10063        859 SYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       859 ~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      |+...++|+.++.|.+..+.+...+-+
T Consensus       451 wiYcigED~vlYCF~~~sG~LE~tl~V  477 (508)
T KOG0275|consen  451 WIYCIGEDGVLYCFSVLSGKLERTLPV  477 (508)
T ss_pred             EEEEEccCcEEEEEEeecCceeeeeec
Confidence            999999999999999999988777654

>KOG1446|consensus

Probab=99.92  E-value=1.4e-22  Score=203.91  Aligned_cols=245  Identities=20%  Similarity=0.191  Sum_probs=200.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|.+|.|+++|.+|++++.|..|+|||..++++++.+.. +-.+..++|-.....++.++...            ...||
T Consensus        16 ~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~------------d~tIr   83 (311)
T KOG1446|consen   16 KINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKE------------DDTIR   83 (311)
T ss_pred             ceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCC------------CCceE
Confidence            799999999999999999999999999999999999886 46788888887777777766522            12389


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      ..++...+.++.|.||...|.+|+.+|-+..+++++.|++|++||++..+..                         ..+
T Consensus        84 yLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cq-------------------------g~l  138 (311)
T KOG1446|consen   84 YLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQ-------------------------GLL  138 (311)
T ss_pred             EEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCc-------------------------eEE
Confidence            9999999999999999999999999999999999999999999999743211                         000


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                      .                                                                               
T Consensus       139 ~-------------------------------------------------------------------------------  139 (311)
T KOG1446|consen  139 N-------------------------------------------------------------------------------  139 (311)
T ss_pred             e-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA--  794 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~--  794 (894)
                                                                 ...-..+||.|+|-++|++.....|+|||++....  
T Consensus       140 -------------------------------------------~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgP  176 (311)
T KOG1446|consen  140 -------------------------------------------LSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGP  176 (311)
T ss_pred             -------------------------------------------cCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCC
Confidence                                                       00012467889999999999888999999887633  


Q ss_pred             eeccc------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCe---eEEEEeeCCcEEEEecC
Q psy10063        795 TAGFL------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI---NSLAFHPDGKSYASGGE  865 (894)
Q Consensus       795 ~~~~~------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V---~~l~fSpdg~~LaS~s~  865 (894)
                      ...+.      .....+.||+||+.+++....+    .++|.|.-.|..+..+.+|...-   -+.+|+||+++|++|+.
T Consensus       177 F~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s----~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~  252 (311)
T KOG1446|consen  177 FTTFSITDNDEAEWTDLEFSPDGKSILLSTNAS----FIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSD  252 (311)
T ss_pred             ceeEccCCCCccceeeeEEcCCCCEEEEEeCCC----cEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecC
Confidence            22222      2234677999999999988876    49999999999998888776543   57889999999999999


Q ss_pred             CCcEEEEecCcccccccccc
Q psy10063        866 DGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       866 Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      ||.|.||+++.+..+.+++-
T Consensus       253 dg~i~vw~~~tg~~v~~~~~  272 (311)
T KOG1446|consen  253 DGTIHVWNLETGKKVAVLRG  272 (311)
T ss_pred             CCcEEEEEcCCCcEeeEecC
Confidence            99999999999988888764

>KOG0641|consensus

Probab=99.92  E-value=1e-21  Score=187.22  Aligned_cols=308  Identities=16%  Similarity=0.153  Sum_probs=222.5

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      .+........|++++|+|.|.+.+.|+...+++|.....-..+  -.+|+. .+.-       ..+.+-....+-+.|+|
T Consensus        25 ~i~~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~--r~~hea-~~~p-------p~v~~kr~khhkgsiyc   94 (350)
T KOG0641|consen   25 AINILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDL--RHAHEA-AKQP-------PSVLCKRNKHHKGSIYC   94 (350)
T ss_pred             EEEEecchhheeeEEecCCCceEEeccCCceEEEEccccccCc--cccccc-ccCC-------CeEEeeeccccCccEEE
Confidence            3445567789999999999999999999999988754321111  112222 1100       00111111222248999


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCc------EEEEEeCCCCeeEEEEcCC----CCEEEEEECCCCeEEEeccCccc
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQ------LLKTYTTERPVNSAALSPI----LPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~------~~~~~~~~~~v~~l~~spd----g~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      .+|+|+|++|++|+.|+.|++..+....      .+..--|++.|..++|..+    |..|++++..+.           
T Consensus        95 ~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc-----------  163 (350)
T KOG0641|consen   95 TAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDC-----------  163 (350)
T ss_pred             EEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcc-----------
Confidence            9999999999999999999998765332      2333336789999999654    445666655443           


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                        .|.+-|...|+.++.+.||.+.|.++ ++-.|-+|++|+.|.+||+||++-...+                       
T Consensus       164 --~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v-----------------------  217 (350)
T KOG0641|consen  164 --KIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCV-----------------------  217 (350)
T ss_pred             --eEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeecccee-----------------------
Confidence              27778899999999999999999887 3447889999999999999998532110                       


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                        ..+..   .                                                                     
T Consensus       218 --~~l~~---~---------------------------------------------------------------------  223 (350)
T KOG0641|consen  218 --NTLDN---D---------------------------------------------------------------------  223 (350)
T ss_pred             --eeccC---c---------------------------------------------------------------------
Confidence              00000   0                                                                     


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                        +. ++      .-....|.++++.|.|++|++|..|....+||++.
T Consensus       224 ----------------------------------~~-~~------glessavaav~vdpsgrll~sg~~dssc~lydirg  262 (350)
T KOG0641|consen  224 ----------------------------------FH-DG------GLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRG  262 (350)
T ss_pred             ----------------------------------cc-CC------CcccceeEEEEECCCcceeeeccCCCceEEEEeeC
Confidence                                              00 00      00124577899999999999999999999999999


Q ss_pred             Cceeecccc---CCCceEeecCCCeEEEEecCCCCceeEEEeecCCc----ceeeeccCCCCCeeEEEEeeCCcEEEEec
Q psy10063        792 NKATAGFLL---SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE----EEFARIKGHFGPINSLAFHPDGKSYASGG  864 (894)
Q Consensus       792 ~~~~~~~~~---~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg----~~l~~l~gH~~~V~~l~fSpdg~~LaS~s  864 (894)
                      ++.+.++..   .+..+.|||...+++.++-|.    .|++-|++..    -.+..+..|.+.+-.+.|+|..-.+++.+
T Consensus       263 ~r~iq~f~phsadir~vrfsp~a~yllt~syd~----~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisss  338 (350)
T KOG0641|consen  263 GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDM----KIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSS  338 (350)
T ss_pred             CceeeeeCCCccceeEEEeCCCceEEEEecccc----eEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeecc
Confidence            998777654   455778999999999999886    5999998732    12233457999999999999999999999


Q ss_pred             CCCcEEEEecC
Q psy10063        865 EDGFVRLHTFD  875 (894)
Q Consensus       865 ~Dg~V~vWdl~  875 (894)
                      .|+.+.+|-+.
T Consensus       339 adkt~tlwa~~  349 (350)
T KOG0641|consen  339 ADKTATLWALN  349 (350)
T ss_pred             CcceEEEeccC
Confidence            99999999875

>KOG0299|consensus

Probab=99.92  E-value=4.3e-23  Score=216.01  Aligned_cols=299  Identities=14%  Similarity=0.119  Sum_probs=229.0

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..+..|...|.||+++||++++++++.||+|.-|++.+|+...-+....  .|....+-|-    -. +..++.+.|.++
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~--ev~k~~~~~~----k~-~r~~h~keil~~  208 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERD--EVLKSHGNPL----KE-SRKGHVKEILTL  208 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccc--hhhhhccCCC----Cc-ccccccceeEEE
Confidence            4567899999999999999999999999999999999998653222111  1100000000    00 001455689999


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      +.++||++||+|+.|..|.||+.++++.++.+.+ .+.|.+++|-..-..|++++.|+.              |++|++.
T Consensus       209 avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drs--------------vkvw~~~  274 (479)
T KOG0299|consen  209 AVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRS--------------VKVWSID  274 (479)
T ss_pred             EEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCc--------------eEEEehh
Confidence            9999999999999999999999999999999886 589999999998899999999998              8999999


Q ss_pred             ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063        562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST  641 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~  641 (894)
                      ....+..+.||+..|.+|....-++.+.+|+.|+++++|++....+                                  
T Consensus       275 ~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesq----------------------------------  320 (479)
T KOG0299|consen  275 QLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQ----------------------------------  320 (479)
T ss_pred             HhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccce----------------------------------
Confidence            8889999999999999999888888888888999999999832110                                  


Q ss_pred             CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063        642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV  721 (894)
Q Consensus       642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v  721 (894)
                                                                                                      
T Consensus       321 --------------------------------------------------------------------------------  320 (479)
T KOG0299|consen  321 --------------------------------------------------------------------------------  320 (479)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc-
Q psy10063        722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL-  800 (894)
Q Consensus       722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~-  800 (894)
                                                      .++.+|.+.+-|++|- +...|++|+.+|.|.||++.+.+.+..... 
T Consensus       321 --------------------------------lifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~A  367 (479)
T KOG0299|consen  321 --------------------------------LIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLA  367 (479)
T ss_pred             --------------------------------eeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCceeEeecc
Confidence                                            0123344456667765 346889999999999999988887653332 


Q ss_pred             --------------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCc----ceeeeccCCCCCeeEEEEeeCCcEEE-
Q psy10063        801 --------------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE----EEFARIKGHFGPINSLAFHPDGKSYA-  861 (894)
Q Consensus       801 --------------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg----~~l~~l~gH~~~V~~l~fSpdg~~La-  861 (894)
                                    -+.+++..+....+++++.++    .|+||-+..|    .++..+. -.+-|++|+|+.+|++|+ 
T Consensus       368 Hgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G----~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~iva  442 (479)
T KOG0299|consen  368 HGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSG----CVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVA  442 (479)
T ss_pred             ccccCCccccccccceeeeEecccCceEEecCCCC----ceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEE
Confidence                          233556777888888888887    4999999887    3444444 457799999999999555 


Q ss_pred             EecCCCcEEEEec
Q psy10063        862 SGGEDGFVRLHTF  874 (894)
Q Consensus       862 S~s~Dg~V~vWdl  874 (894)
                      ..|....+-=|-.
T Consensus       443 giGkEhRlGRW~~  455 (479)
T KOG0299|consen  443 GIGKEHRLGRWWC  455 (479)
T ss_pred             ecccccccceeeE
Confidence            4566655544543

>KOG0313|consensus

Probab=99.91  E-value=6.5e-23  Score=209.71  Aligned_cols=210  Identities=18%  Similarity=0.294  Sum_probs=181.6

Q ss_pred             cceeeeeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCCC---EEEEecCCCcEEEEecCCCeE----EEEecCCCC
Q psy10063        380 VDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQ---YIITGHAKGDICTWDLRMGRE----LESISGHAK  452 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~---~L~sgs~Dg~I~iWd~~tg~~----~~~l~~h~~  452 (894)
                      ...++.-+.||..-+....+...+++.||.++|.+++|.-...   .|++++.|.++++|.++.++.    ++..+||+.
T Consensus       115 ~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~  194 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKR  194 (423)
T ss_pred             CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccccc
Confidence            4556666777777777777888889999999999998875333   699999999999999987754    444569998


Q ss_pred             CCeeEEEEcCCCCEEEEEeCCCCc-------------------------------------------cceEEEEEecCCC
Q psy10063        453 EPINDMQFSKDATMFITASHSQAV-------------------------------------------EPINDMQFSKDAT  489 (894)
Q Consensus       453 ~~V~~v~~spdg~~la~~~~d~~i-------------------------------------------~~V~~l~~spdg~  489 (894)
                       .|.+|...++|.++++++.|..+                                           ++|.++.|++ ..
T Consensus       195 -~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~  272 (423)
T KOG0313|consen  195 -SVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-AT  272 (423)
T ss_pred             -ceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CC
Confidence             99999999999999999988766                                           5899999988 67


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc---eE
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE---EF  566 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~---~~  566 (894)
                      .+++++.|++|+.||+..++++..+.....+.|+.+++..++|++|+.+..              +|+||.+.+.   ..
T Consensus       273 v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~--------------irl~DPR~~~gs~v~  338 (423)
T KOG0313|consen  273 VIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRH--------------IRLWDPRTGDGSVVS  338 (423)
T ss_pred             ceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCc--------------eeecCCCCCCCceeE
Confidence            899999999999999999999999999999999999999999999999997              7888877653   45


Q ss_pred             EEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCC
Q psy10063        567 ARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       567 ~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +.|.||...|.++.|+|... +|++|+.|+.+++||++..
T Consensus       339 ~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~  378 (423)
T KOG0313|consen  339 QSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST  378 (423)
T ss_pred             EeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC
Confidence            57889999999999999654 6899999999999999753

>KOG0310|consensus

Probab=99.91  E-value=3.6e-23  Score=218.30  Aligned_cols=278  Identities=14%  Similarity=0.191  Sum_probs=222.0

Q ss_pred             cCCCCEEEEEEccCCC--EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        407 DQSAKITSLLWGNLDQ--YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      .....|.+|+|+|..-  +.+++|  -.|.||+..+...++.|..-++                         .|+++.|
T Consensus        24 ke~~~vssl~fsp~~P~d~aVt~S--~rvqly~~~~~~~~k~~srFk~-------------------------~v~s~~f   76 (487)
T KOG0310|consen   24 KEHNSVSSLCFSPKHPYDFAVTSS--VRVQLYSSVTRSVRKTFSRFKD-------------------------VVYSVDF   76 (487)
T ss_pred             cccCcceeEecCCCCCCceEEecc--cEEEEEecchhhhhhhHHhhcc-------------------------ceeEEEe
Confidence            3457899999999543  344443  3699999888777776665555                         6889999


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      ..||++|++|...|.|+|||+.+...++.+. |..++..+.|+|++..+++.++|+.+             +++||+...
T Consensus        77 R~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v-------------~k~~d~s~a  143 (487)
T KOG0310|consen   77 RSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKV-------------VKYWDLSTA  143 (487)
T ss_pred             ecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCce-------------EEEEEcCCc
Confidence            9999999999999999999977766666665 57899999999999888888888775             899999988


Q ss_pred             ceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      ..+..+.+|.+.|.|.+|+|. +.++++||.||.|++||.+....                        .+         
T Consensus       144 ~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~------------------------~v---------  190 (487)
T KOG0310|consen  144 YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS------------------------RV---------  190 (487)
T ss_pred             EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc------------------------ee---------
Confidence            877789999999999999996 45899999999999999864310                        00         


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                                                                                      
T Consensus       191 --------------------------------------------------------------------------------  190 (487)
T KOG0310|consen  191 --------------------------------------------------------------------------------  190 (487)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec----c
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG----F  798 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~----~  798 (894)
                                                      ..-.|...|..+.+-|.|..||+++... |++||+..+.++..    |
T Consensus       191 --------------------------------~elnhg~pVe~vl~lpsgs~iasAgGn~-vkVWDl~~G~qll~~~~~H  237 (487)
T KOG0310|consen  191 --------------------------------VELNHGCPVESVLALPSGSLIASAGGNS-VKVWDLTTGGQLLTSMFNH  237 (487)
T ss_pred             --------------------------------EEecCCCceeeEEEcCCCCEEEEcCCCe-EEEEEecCCceehhhhhcc
Confidence                                            0012455677778888888888887654 99999886665432    4


Q ss_pred             ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      ...+.++++..++.+|++++-|+    .|+|||+..-+.+..++ -.++|.+|+++||++.++.|..+|.+.+=+..
T Consensus       238 ~KtVTcL~l~s~~~rLlS~sLD~----~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~  309 (487)
T KOG0310|consen  238 NKTVTCLRLASDSTRLLSGSLDR----HVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE  309 (487)
T ss_pred             cceEEEEEeecCCceEeeccccc----ceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehhh
Confidence            44566788888999999999988    69999998888888775 46889999999999999999999988776443

>KOG0310|consensus

Probab=99.91  E-value=9.3e-24  Score=222.68  Aligned_cols=248  Identities=14%  Similarity=0.157  Sum_probs=204.4

Q ss_pred             ceEEEEEecCCC-EEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDAT-MFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .|.+|+|+|... -+|+.+ .-.|.||+......++.|. .+..|++++|..||++|++|...|.              |
T Consensus        28 ~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~--------------V   92 (487)
T KOG0310|consen   28 SVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGH--------------V   92 (487)
T ss_pred             cceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCc--------------E
Confidence            577777777332 244333 4579999998887777554 5789999999999999999999997              8


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      ++||+.+...++.+.+|+.+|..+.|+|++ ..|++|+.|+.+++||+.+...                           
T Consensus        93 ~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v---------------------------  145 (487)
T KOG0310|consen   93 KVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV---------------------------  145 (487)
T ss_pred             EEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE---------------------------
Confidence            999988877888999999999999999965 5788888999999999865310                           


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                                                                                                      
T Consensus       146 --------------------------------------------------------------------------------  145 (487)
T KOG0310|consen  146 --------------------------------------------------------------------------------  145 (487)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCC-
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKN-  792 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~-  792 (894)
                                                            ...+.+|.+.|.|.+++|- +.++++|+.||.||+||.+.. 
T Consensus       146 --------------------------------------~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~  187 (487)
T KOG0310|consen  146 --------------------------------------QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT  187 (487)
T ss_pred             --------------------------------------EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC
Confidence                                                  0024578999999999997 568999999999999999887 


Q ss_pred             ceeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCC-cceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        793 KATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       793 ~~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      ..+..+..  .+..++|-|.|+.++++++..     |+|||+-. ++++..+..|...|+||++..++..|+++|.|+.|
T Consensus       188 ~~v~elnhg~pVe~vl~lpsgs~iasAgGn~-----vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~V  262 (487)
T KOG0310|consen  188 SRVVELNHGCPVESVLALPSGSLIASAGGNS-----VKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHV  262 (487)
T ss_pred             ceeEEecCCCceeeEEEcCCCCEEEEcCCCe-----EEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccce
Confidence            44555544  455888999999999999884     99999984 56666666699999999999999999999999999


Q ss_pred             EEEecCccccccccccCcccc
Q psy10063        870 RLHTFDQAYFDYTFDISEEFH  890 (894)
Q Consensus       870 ~vWdl~~~~~~~~~~~~~~~~  890 (894)
                      +||++..-+.++.+.++.+++
T Consensus       263 KVfd~t~~Kvv~s~~~~~pvL  283 (487)
T KOG0310|consen  263 KVFDTTNYKVVHSWKYPGPVL  283 (487)
T ss_pred             EEEEccceEEEEeeeccccee
Confidence            999999999999998887765

>KOG0305|consensus

Probab=99.91  E-value=7.2e-23  Score=224.82  Aligned_cols=249  Identities=17%  Similarity=0.205  Sum_probs=201.4

Q ss_pred             CCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC-CCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG-HAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       398 ~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~-h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      ...+......+...|+++.|+++|.+|++|..+|.|.|||+...+.+..+.+ |..                        
T Consensus       206 s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~------------------------  261 (484)
T KOG0305|consen  206 SGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHAS------------------------  261 (484)
T ss_pred             CCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCc------------------------
Confidence            3444444445589999999999999999999999999999999999999998 666                        


Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE-Ee-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT-YT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~-~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                       .|.+++|.  +..|.+|+.|+.|.++|++..+.+.. +. |...|..+.|++|+.+|++|+.|..              
T Consensus       262 -rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~--------------  324 (484)
T KOG0305|consen  262 -RVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNV--------------  324 (484)
T ss_pred             -eeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccc--------------
Confidence             78888887  67899999999999999998776655 54 5689999999999999999999997              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEe--CCCcEEEEECCCCcccc---CCCceeeeEECcCCcEEEe
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGG--EDGFLISNTLSNGLDIS---EGSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs--~Dg~I~vwdl~~~~~~~---~~~~v~~~~~spdg~~l~~  628 (894)
                      +.|||....+.+..+..|.+.|..++|+| ...+||+|+  .|+.|++|+...+..+.   .+.+|..+.|++..+-++.
T Consensus       325 ~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~s  404 (484)
T KOG0305|consen  325 VFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLS  404 (484)
T ss_pred             eEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEE
Confidence            88999988888899999999999999999 456788875  59999999999887653   5778888888887644422


Q ss_pred             cCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEee
Q psy10063        629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARN  708 (894)
Q Consensus       629 ~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~  708 (894)
                      ..                       ...+..|.+|.-..                                         
T Consensus       405 th-----------------------G~s~n~i~lw~~ps-----------------------------------------  420 (484)
T KOG0305|consen  405 TH-----------------------GYSENQITLWKYPS-----------------------------------------  420 (484)
T ss_pred             ec-----------------------CCCCCcEEEEeccc-----------------------------------------
Confidence            21                       11233444443110                                         


Q ss_pred             eEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063        709 RMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       709 ~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd  788 (894)
                                                               -+....+.+|...|..++++|||..|++|+.|.+|++|.
T Consensus       421 -----------------------------------------~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~  459 (484)
T KOG0305|consen  421 -----------------------------------------MKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWN  459 (484)
T ss_pred             -----------------------------------------cceeeeecCCcceeEEEEECCCCCEEEEecccCcEEecc
Confidence                                                     112235778999999999999999999999999999999


Q ss_pred             ccCC
Q psy10063        789 DRKN  792 (894)
Q Consensus       789 ~~~~  792 (894)
                      +...
T Consensus       460 ~f~~  463 (484)
T KOG0305|consen  460 LFDE  463 (484)
T ss_pred             ccCC
Confidence            7653

>KOG0650|consensus

Probab=99.91  E-value=6.8e-23  Score=219.86  Aligned_cols=274  Identities=16%  Similarity=0.249  Sum_probs=224.2

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCE--EEEEeCCCCc-
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATM--FITASHSQAV-  476 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~--la~~~~d~~i-  476 (894)
                      .+.+.+.||.+.|+||...|.|.+|++|+.||+|+||.+.+|+|++.+....  .|.||+|.|.+..  ||++-....+ 
T Consensus       391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~--~I~~vaw~P~~~~~vLAvA~~~~~~i  468 (733)
T KOG0650|consen  391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDS--EIRSVAWNPLSDLCVLAVAVGECVLI  468 (733)
T ss_pred             eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecc--eeEEEEecCCCCceeEEEEecCceEE
Confidence            3455889999999999999999999999999999999999999999988654  7999999997653  3333222210 


Q ss_pred             -----------------------------------------------------cceEEEEEecCCCEEEEEECC---CCE
Q psy10063        477 -----------------------------------------------------EPINDMQFSKDATMFITASKD---HTA  500 (894)
Q Consensus       477 -----------------------------------------------------~~V~~l~~spdg~~L~sgs~D---g~V  500 (894)
                                                                           ..|.+|.|+..|.||++...+   ..|
T Consensus       469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~V  548 (733)
T KOG0650|consen  469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSV  548 (733)
T ss_pred             eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceE
Confidence                                                                 478899999999999998664   568


Q ss_pred             EEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEE
Q psy10063        501 KLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL  579 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l  579 (894)
                      .|+++...+...-|. .++.|.++.|+|...+|+++....               |++||+...+.+++|.....+|..+
T Consensus       549 liHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~---------------vRiYdL~kqelvKkL~tg~kwiS~m  613 (733)
T KOG0650|consen  549 LIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRS---------------VRIYDLSKQELVKKLLTGSKWISSM  613 (733)
T ss_pred             EEEecccccccCchhhcCCceeEEEecCCCceEEEEeccc---------------eEEEehhHHHHHHHHhcCCeeeeee
Confidence            999998877776664 468899999999999999998776               9999999988888887778899999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCc
Q psy10063        580 AFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSG  659 (894)
Q Consensus       580 ~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~  659 (894)
                      +.+|.|..|+.|+.|+.++.||++-...                                                    
T Consensus       614 sihp~GDnli~gs~d~k~~WfDldlssk----------------------------------------------------  641 (733)
T KOG0650|consen  614 SIHPNGDNLILGSYDKKMCWFDLDLSSK----------------------------------------------------  641 (733)
T ss_pred             eecCCCCeEEEecCCCeeEEEEcccCcc----------------------------------------------------
Confidence            9999999999999999999999853210                                                    


Q ss_pred             eEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeec
Q psy10063        660 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWG  739 (894)
Q Consensus       660 i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~  739 (894)
                                                                                                      
T Consensus       642 --------------------------------------------------------------------------------  641 (733)
T KOG0650|consen  642 --------------------------------------------------------------------------------  641 (733)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEec
Q psy10063        740 HIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTS  819 (894)
Q Consensus       740 ~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~  819 (894)
                                  ..+.+.-|...+..++|++.-.+|++|+.||.+.||..                              
T Consensus       642 ------------Pyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg------------------------------  679 (733)
T KOG0650|consen  642 ------------PYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHG------------------------------  679 (733)
T ss_pred             ------------hhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEee------------------------------
Confidence                        01123447777889999999999999999999998852                              


Q ss_pred             CCCCceeEEEee-cCCc---ceeeeccCCCCC----eeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063        820 TKVGKFDARFYH-LIFE---EEFARIKGHFGP----INSLAFHPDGKSYASGGEDGFVRLH  872 (894)
Q Consensus       820 d~~g~~~I~vwd-~~tg---~~l~~l~gH~~~----V~~l~fSpdg~~LaS~s~Dg~V~vW  872 (894)
                              .||+ +-..   -.+.+|+||...    |.++.|+|...||+++|.||.||||
T Consensus       680 --------~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  680 --------MVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             --------eeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence                    2221 1111   245678888765    8999999999999999999999999

>KOG0643|consensus

Probab=99.91  E-value=1.6e-23  Score=204.81  Aligned_cols=220  Identities=46%  Similarity=0.733  Sum_probs=177.7

Q ss_pred             eeeeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC
Q psy10063        383 LNSMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA  451 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~  451 (894)
                      .+.+..+|.+|.+...           +...-.+.||.+.|+||+..-+.++|++|+.|.+++|||+++|+++..++...
T Consensus        15 qiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~   94 (327)
T KOG0643|consen   15 QIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNS   94 (327)
T ss_pred             eEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCC
Confidence            3456777777765543           23334788999999999999999999999999999999999999888776543


Q ss_pred             CCCeeEEEEcCCCCEEEEEeC------------------------------------------------------CCCc-
Q psy10063        452 KEPINDMQFSKDATMFITASH------------------------------------------------------SQAV-  476 (894)
Q Consensus       452 ~~~V~~v~~spdg~~la~~~~------------------------------------------------------d~~i-  476 (894)
                        .|..+.|+.+|.+++.+.+                                                      +|.+ 
T Consensus        95 --~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is  172 (327)
T KOG0643|consen   95 --PVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSIS  172 (327)
T ss_pred             --eeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEE
Confidence              5777777776666555443                                                      2222 


Q ss_pred             ------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC
Q psy10063        477 ------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       477 ------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~  538 (894)
                                        ..|..|+|++|..++++++.|.+-++||+++.++++.+....+|.+.+++|--.+++.+++.
T Consensus       173 ~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGq  252 (327)
T KOG0643|consen  173 IYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQ  252 (327)
T ss_pred             EEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCc
Confidence                              24555666666666666666666666666666677777778899999999999999999999


Q ss_pred             CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        539 EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      ....|-....+.++|+.|+|++...+++..+++|-++|.+|+|+|+|+..++|++||.||+.-++.
T Consensus       253 eA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  253 EAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             eeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence            999999999999999999999999999999999999999999999999999999999999986653

>KOG1408|consensus

Probab=99.91  E-value=1.4e-21  Score=212.70  Aligned_cols=436  Identities=14%  Similarity=0.087  Sum_probs=274.7

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC--Cc--------------
Q psy10063        413 TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ--AV--------------  476 (894)
Q Consensus       413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~--~i--------------  476 (894)
                      .+|+..|-..+++.- ....|.||+.+..+..+.+..+.. .+.+++|+++|+|+++|--..  .+              
T Consensus        41 ~gLa~~p~Sgl~aYp-AGCvVVlfn~~~~tQ~hlvnssRk-~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEf  118 (1080)
T KOG1408|consen   41 NGLASVPCSGLCAYP-AGCVVVLFNVDSCTQSHLVNSSRK-PLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEF  118 (1080)
T ss_pred             Ccccccccccceeec-cCcEEEEEcccccchhheecccCc-ceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhh
Confidence            345555644444432 236899999998888888888888 999999999999999876221  11              


Q ss_pred             ----cceEEEEEecCCCEEEEEECC--CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063        477 ----EPINDMQFSKDATMFITASKD--HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       477 ----~~V~~l~~spdg~~L~sgs~D--g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~  550 (894)
                          -.|.|++|+|.+++|++.+..  -.|.+||.+.......-+....|..++|+.||.|+++.+. ..+.+|.++...
T Consensus       119 vdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gn-rHvk~wyl~~~~  197 (1080)
T KOG1408|consen  119 VDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGN-RHVKLWYLQIQS  197 (1080)
T ss_pred             hhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcccccccccceeEEEEEEccCCceeeeeee-eeEEEEEeeccc
Confidence                378999999999999987754  4578898876655555555678999999999999988764 457788776433


Q ss_pred             ce-----------------------------------e------------------------------------------
Q psy10063        551 GK-----------------------------------F------------------------------------------  553 (894)
Q Consensus       551 ~~-----------------------------------~------------------------------------------  553 (894)
                      +.                                   |                                          
T Consensus       198 KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgC  277 (1080)
T KOG1408|consen  198 KYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGC  277 (1080)
T ss_pred             cccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEee
Confidence            10                                   0                                          


Q ss_pred             ---eEEEEeccccceEEEcc-CC-----------------------CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        554 ---DARFYHLIFEEEFARIK-GH-----------------------FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       554 ---~v~vwd~~~~~~~~~l~-~h-----------------------~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                         -||+|...+-..+..|. .|                       .-....+.|++...+|.+.-.|..|+|||++.-.
T Consensus       278 a~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~  357 (1080)
T KOG1408|consen  278 AKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVN  357 (1080)
T ss_pred             ccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccc
Confidence               02222222111111110 01                       1123457788888889888999999999998765


Q ss_pred             cccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC-------CCCCeeeeccccCCCceEEechhhHHHhh-------
Q psy10063        607 DISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS-------TDTGGVFSGSRVDDSGVELTKDEQIEMAR-------  672 (894)
Q Consensus       607 ~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~-------~d~~~i~sgs~~~d~~i~l~~~~~~~~~~-------  672 (894)
                      ++..-   ..+         ..+..++..+.......       .....++.++  .|+.|++|+.+......       
T Consensus       358 kvgk~---~s~---------lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCS--sD~TIRlW~l~~ctnn~vyrRNil  423 (1080)
T KOG1408|consen  358 KVGKC---SSM---------LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCS--SDGTIRLWDLAFCTNNQVYRRNIL  423 (1080)
T ss_pred             cccce---eee---------eeccceeeeeccccccccCcccccCCccceeEec--CCCcEEEeecccccccceeecccc
Confidence            43211   111         12222333332222111       1122345555  78999999876521110       


Q ss_pred             --hcccccCCCCeEEeec---cCC-cceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccc
Q psy10063        673 --NRMSINHSGTRLHVNP---FDE-QQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPF  746 (894)
Q Consensus       673 --~~~~~~~~g~~~~~~~---~~~-~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~  746 (894)
                        .............+..   ... ........+.+  ...+.++++++|+.++.+...+.       |.+++..+    
T Consensus       424 s~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r--~G~R~~~vSp~gqhLAsGDr~Gn-------lrVy~Lq~----  490 (1080)
T KOG1408|consen  424 SANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSR--FGFRALAVSPDGQHLASGDRGGN-------LRVYDLQE----  490 (1080)
T ss_pred             hhhhhcCccccCchhhhhhccCCcccccchhhcCcc--cceEEEEECCCcceecccCccCc-------eEEEEehh----
Confidence              0000000000000000   000 00000111111  22356888999998888655444       33332221    


Q ss_pred             ccCCCCcceecCCCCceEEEeeCCC---CCEEEEecCCCcEEEEEccCCceeeccccC----------------------
Q psy10063        747 KLDGSDTPILAGPVDIGFKMPEPPK---REKLALALADKVSERYRDRKNKATAGFLLS----------------------  801 (894)
Q Consensus       747 ~~dg~~~~~~~~h~~~v~~la~spd---g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~----------------------  801 (894)
                         .+....+..|+..|.|+.|+-.   .++||+++.|..|.|||+.....+.+...+                      
T Consensus       491 ---l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~Misc  567 (1080)
T KOG1408|consen  491 ---LEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISC  567 (1080)
T ss_pred             ---hhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEec
Confidence               1233457789999999999864   688999999999999996543221111100                      


Q ss_pred             -------------------------------CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC---CCCC
Q psy10063        802 -------------------------------CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG---HFGP  847 (894)
Q Consensus       802 -------------------------------~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g---H~~~  847 (894)
                                                     ..++...|..++++++..|+    .|+||+++.|++.+.|+|   |.+.
T Consensus       568 GADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDr----nirif~i~sgKq~k~FKgs~~~eG~  643 (1080)
T KOG1408|consen  568 GADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDR----NIRIFDIESGKQVKSFKGSRDHEGD  643 (1080)
T ss_pred             cCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEeccc----ceEEEeccccceeeeecccccCCCc
Confidence                                           11344566778888888888    599999999999999884   6667


Q ss_pred             eeEEEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        848 INSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       848 V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      .-.|...|.|-|||+...|+.|.|+|+-.++++..+.-
T Consensus       644 lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G  681 (1080)
T KOG1408|consen  644 LIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG  681 (1080)
T ss_pred             eEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC
Confidence            77899999999999999999999999999999887653

>KOG0646|consensus

Probab=99.91  E-value=1.1e-22  Score=213.33  Aligned_cols=280  Identities=17%  Similarity=0.166  Sum_probs=209.4

Q ss_pred             EecCC-CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC-CCCEEEE
Q psy10063        426 TGHAK-GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK-DHTAKLF  503 (894)
Q Consensus       426 sgs~D-g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~-Dg~V~iw  503 (894)
                      +++.| ..+.+||+++|..+..+++....                        .-.++..- .+.+|+++.. .-.|.+|
T Consensus        12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a------------------------~~~sl~~l-~~~yllsaq~~rp~l~vw   66 (476)
T KOG0646|consen   12 SSSFDPINCIVWDLRTGTSLLQYKGSYLA------------------------QAASLTAL-NNEYLLSAQLKRPLLHVW   66 (476)
T ss_pred             ccCCCCcceeEEecCCCceeEEecCcccc------------------------cchhhhhh-chhheeeecccCcccccc
Confidence            34445 45999999999999888876220                        00001100 2355665543 3578999


Q ss_pred             EcCCCcEEE-EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe
Q psy10063        504 TTHDRQLLK-TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  582 (894)
Q Consensus       504 dl~~~~~~~-~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s  582 (894)
                      .+....... .+...++|.+++-+|.|.+|+.++..+.              |++|.+.+|..+..+.+|...|+||.|+
T Consensus        67 ~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~--------------lYlWelssG~LL~v~~aHYQ~ITcL~fs  132 (476)
T KOG0646|consen   67 EILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGN--------------LYLWELSSGILLNVLSAHYQSITCLKFS  132 (476)
T ss_pred             ccCchhhhhhhcccccceeeeecCCCceEEEeecccCc--------------EEEEEeccccHHHHHHhhccceeEEEEe
Confidence            987655544 5556899999999999999998877776              8999999999999999999999999999


Q ss_pred             cCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEE
Q psy10063        583 PDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVEL  662 (894)
Q Consensus       583 pdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l  662 (894)
                      .||.+|++|+.||.|++|.+-.-.                              .              +.  .+.    
T Consensus       133 ~dgs~iiTgskDg~V~vW~l~~lv------------------------------~--------------a~--~~~----  162 (476)
T KOG0646|consen  133 DDGSHIITGSKDGAVLVWLLTDLV------------------------------S--------------AD--NDH----  162 (476)
T ss_pred             CCCcEEEecCCCccEEEEEEEeec------------------------------c--------------cc--cCC----
Confidence            999999999999999999873210                              0              00  000    


Q ss_pred             echhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeecccc
Q psy10063        663 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIE  742 (894)
Q Consensus       663 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~  742 (894)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (476)
T KOG0646|consen  163 --------------------------------------------------------------------------------  162 (476)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcccccCCCCcceecCCCCceEEEeeCC--CCCEEEEecCCCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEEe
Q psy10063        743 GTPFKLDGSDTPILAGPVDIGFKMPEPP--KREKLALALADKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTTT  818 (894)
Q Consensus       743 g~~~~~dg~~~~~~~~h~~~v~~la~sp--dg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~as  818 (894)
                            .-+.+..+..|.-.|..+.+.+  -..+|++++.|.++++||+..+.++..+...  ..+++++|-+..++++.
T Consensus       163 ------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt  236 (476)
T KOG0646|consen  163 ------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGT  236 (476)
T ss_pred             ------CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecC
Confidence                  0001122344555555555443  3578999999999999999999998776654  55788999999999988


Q ss_pred             cCCCCceeEEEeecCC----------------cceeeeccCCCC--CeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063        819 STKVGKFDARFYHLIF----------------EEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       819 ~d~~g~~~I~vwd~~t----------------g~~l~~l~gH~~--~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      .++    .|.+.++..                +..+..+.||.+  .|+||+++-||.+|++|+.||.|+|||+...+++
T Consensus       237 ~~G----~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~i  312 (476)
T KOG0646|consen  237 EEG----KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCI  312 (476)
T ss_pred             Ccc----eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHH
Confidence            887    355554421                234567889998  9999999999999999999999999999999888


Q ss_pred             cccc
Q psy10063        881 YTFD  884 (894)
Q Consensus       881 ~~~~  884 (894)
                      ..+.
T Consensus       313 Rtl~  316 (476)
T KOG0646|consen  313 RTLQ  316 (476)
T ss_pred             HHHh
Confidence            7765

>KOG1273|consensus

Probab=99.91  E-value=2.2e-22  Score=200.87  Aligned_cols=278  Identities=17%  Similarity=0.184  Sum_probs=210.1

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEE
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMF  491 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L  491 (894)
                      -.|+.|++-|.+||+|+.||.|.|||+.+...-+.|.+|-.                         +|.+++||+||++|
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~-------------------------pi~sl~WS~dgr~L   80 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVR-------------------------PITSLCWSRDGRKL   80 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhcccc-------------------------ceeEEEecCCCCEe
Confidence            78999999999999999999999999999988888888887                         89999999999999


Q ss_pred             EEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC
Q psy10063        492 ITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG  571 (894)
Q Consensus       492 ~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~  571 (894)
                      +++|.|-.|++||+..|.+++.+....+|+.+.|+|..+..+++......             -.+.++..++. ..|..
T Consensus        81 ltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~s-------------p~vi~~s~~~h-~~Lp~  146 (405)
T KOG1273|consen   81 LTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEES-------------PVVIDFSDPKH-SVLPK  146 (405)
T ss_pred             eeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCC-------------cEEEEecCCce-eeccC
Confidence            99999999999999999999999999999999999987666655533321             11222221111 11111


Q ss_pred             -CC----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCC
Q psy10063        572 -HF----GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDT  646 (894)
Q Consensus       572 -h~----~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~  646 (894)
                       ..    ..-.+..|.+.|++|++|...|.+.|++.++.+.+.                         .+.         
T Consensus       147 d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~va-------------------------s~r---------  192 (405)
T KOG1273|consen  147 DDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVA-------------------------SFR---------  192 (405)
T ss_pred             CCccccccccccccccCCCCEEEEecCcceEEEEecchheeee-------------------------eee---------
Confidence             11    112234688889999999999999999876532110                         000         


Q ss_pred             CeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCc
Q psy10063        647 GGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDE  726 (894)
Q Consensus       647 ~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~  726 (894)
                                                                                                      
T Consensus       193 --------------------------------------------------------------------------------  192 (405)
T KOG1273|consen  193 --------------------------------------------------------------------------------  192 (405)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee---------ec
Q psy10063        727 QQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT---------AG  797 (894)
Q Consensus       727 ~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~---------~~  797 (894)
                                                  +.  ....|..|.|+..|++|+.-+.|+.||.|+++.....         ..
T Consensus       193 ----------------------------it--s~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K  242 (405)
T KOG1273|consen  193 ----------------------------IT--SVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHK  242 (405)
T ss_pred             ----------------------------ec--hheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHH
Confidence                                        00  0123567778888999999999999999997632211         11


Q ss_pred             ccc-----CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC-CCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        798 FLL-----SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-GPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       798 ~~~-----~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                      +..     .-..++||.||.+++.++....   .++||....|.+++.|.|-. ....+|.|+|-...|++- ..|.|+|
T Consensus       243 ~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aH---aLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~i  318 (405)
T KOG1273|consen  243 LQDVVNKLQWKKCCFSGDGEYVCAGSARAH---ALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYI  318 (405)
T ss_pred             HHHHHhhhhhhheeecCCccEEEeccccce---eEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEE
Confidence            111     2236789999999998885543   69999999999999999887 567789999999989988 6789999


Q ss_pred             EecCc
Q psy10063        872 HTFDQ  876 (894)
Q Consensus       872 Wdl~~  876 (894)
                      |.+..
T Consensus       319 w~~~~  323 (405)
T KOG1273|consen  319 WAVVQ  323 (405)
T ss_pred             EEeec
Confidence            98653

>KOG0301|consensus

Probab=99.90  E-value=2e-22  Score=220.28  Aligned_cols=280  Identities=16%  Similarity=0.186  Sum_probs=219.2

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL--ESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      .+...+.||...|+.|++.+. .+++++|+||+++||+-..++.+  ..+.+|.+                         
T Consensus         5 ~ls~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g-------------------------   58 (745)
T KOG0301|consen    5 KLSHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKG-------------------------   58 (745)
T ss_pred             eeEEEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcc-------------------------
Confidence            466789999999999997654 48999999999999997655544  34555665                         


Q ss_pred             ceEE-EEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PIND-MQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~-l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.+ ++|.+ ++.+|++|+.|+.|.+|.+....++..+.+ +..|.|++...++. |++|+.|..              
T Consensus        59 ~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~T--------------  123 (745)
T KOG0301|consen   59 FIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDST--------------  123 (745)
T ss_pred             eeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccc--------------
Confidence            2322 55554 566799999999999999999999998875 58899999888887 899999988              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      +++|-.  +++...+.+|...|+++++-|++ .+++|+.|..|++|.-.                               
T Consensus       124 akvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~-------------------------------  169 (745)
T KOG0301|consen  124 AKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGG-------------------------------  169 (745)
T ss_pred             eEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCC-------------------------------
Confidence            566643  46666789999999999999987 78999999999999531                               


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (745)
T KOG0301|consen  170 --------------------------------------------------------------------------------  169 (745)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                          ..+..+.+|.+.|..+++-+++ .|++++.||.|++|++ .++.
T Consensus       170 ------------------------------------~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~  211 (745)
T KOG0301|consen  170 ------------------------------------TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEV  211 (745)
T ss_pred             ------------------------------------chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCce
Confidence                                                1122456789999999998764 5778899999999998 4444


Q ss_pred             eeccc---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        795 TAGFL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       795 ~~~~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                      +.++.   ..+.++....+++.+++++.|+    +++||+..  ++...+....-.||++.+-+.|. |++|+.||.|||
T Consensus       212 l~~~~ghtn~vYsis~~~~~~~Ivs~gEDr----tlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrV  284 (745)
T KOG0301|consen  212 LLEMHGHTNFVYSISMALSDGLIVSTGEDR----TLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRV  284 (745)
T ss_pred             eeeeeccceEEEEEEecCCCCeEEEecCCc----eEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEE
Confidence            44332   2233444566788899999998    69999987  67777765666899999999998 888889999999


Q ss_pred             EecCcccc
Q psy10063        872 HTFDQAYF  879 (894)
Q Consensus       872 Wdl~~~~~  879 (894)
                      |..+....
T Consensus       285 fT~~k~R~  292 (745)
T KOG0301|consen  285 FTVDKDRK  292 (745)
T ss_pred             EEeccccc
Confidence            99874443

>KOG0308|consensus

Probab=99.90  E-value=4.8e-23  Score=223.28  Aligned_cols=292  Identities=14%  Similarity=0.154  Sum_probs=224.3

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      .++.|.+.|..++...+|+.|++++.|-+|++|+...+  -++..|..|.+                         .|.|
T Consensus        68 sme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~D-------------------------YVkc  122 (735)
T KOG0308|consen   68 SMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKD-------------------------YVKC  122 (735)
T ss_pred             hhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccc-------------------------hhee
Confidence            56679999999999999999999999999999999887  67888899998                         7788


Q ss_pred             EEE-ecCCCEEEEEECCCCEEEEEcCCC--cEEEEEe----------CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        482 MQF-SKDATMFITASKDHTAKLFTTHDR--QLLKTYT----------TERPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       482 l~~-spdg~~L~sgs~Dg~V~iwdl~~~--~~~~~~~----------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                      |++ .++..++|+|+.|+.|.|||+..+  +++..+.          +...|++++..+.|..|+.|+.++.        
T Consensus       123 la~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~--------  194 (735)
T KOG0308|consen  123 LAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD--------  194 (735)
T ss_pred             eeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc--------
Confidence            887 678889999999999999999987  3443332          2468999999999988888887775        


Q ss_pred             ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEe
Q psy10063        549 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       549 ~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~  628 (894)
                            +++||.++++.+.+|+||...|.+|..+.||..+++++.||.|++||+...+.+                    
T Consensus       195 ------lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl--------------------  248 (735)
T KOG0308|consen  195 ------LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCL--------------------  248 (735)
T ss_pred             ------eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccccee--------------------
Confidence                  999999999999999999999999999999999999999999999998532211                    


Q ss_pred             cCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEee
Q psy10063        629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARN  708 (894)
Q Consensus       629 ~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~  708 (894)
                                                                                                      
T Consensus       249 --------------------------------------------------------------------------------  248 (735)
T KOG0308|consen  249 --------------------------------------------------------------------------------  248 (735)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063        709 RMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       709 ~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd  788 (894)
                                                                   ..+..|.+.|+++..+|+-..+.+|+.||.|..-|
T Consensus       249 ---------------------------------------------~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Td  283 (735)
T KOG0308|consen  249 ---------------------------------------------ATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTD  283 (735)
T ss_pred             ---------------------------------------------eeEEeccCceEEEeeCCCcceEEecCCCCcEEecc
Confidence                                                         11233667788888889999999999999999999


Q ss_pred             ccCCce---eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc-------ceee------------------e
Q psy10063        789 DRKNKA---TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE-------EEFA------------------R  840 (894)
Q Consensus       789 ~~~~~~---~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg-------~~l~------------------~  840 (894)
                      ++....   +......+..+.+..+...+.++..+.    .|+-|.++-.       ++..                  .
T Consensus       284 l~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds----~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~v  359 (735)
T KOG0308|consen  284 LRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDS----SIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSV  359 (735)
T ss_pred             cCCchhheEeecCCCchhhhhhccccCCceeeeccc----cceecCCccccccccCCCCCcccccCCCccccccCCCcee
Confidence            887433   222223333444444444445555554    3666654321       1110                  0


Q ss_pred             ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       841 l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      +.| ..+|...++-.|.+++++-..+|.+++||+-..+.+..|.
T Consensus       360 i~G-g~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~~d~g  402 (735)
T KOG0308|consen  360 IPG-GAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKVEDFG  402 (735)
T ss_pred             ccC-chhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeehhhcc
Confidence            111 1234445566788999999999999999998888877775

>PTZ00420 coronin; Provisional

Probab=99.90  E-value=2.1e-21  Score=222.18  Aligned_cols=140  Identities=14%  Similarity=0.144  Sum_probs=118.0

Q ss_pred             ecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-CCEEEEEECCCCEEEEEc
Q psy10063        427 GHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-ATMFITASKDHTAKLFTT  505 (894)
Q Consensus       427 gs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-g~~L~sgs~Dg~V~iwdl  505 (894)
                      |+.++.|+||++.....+..+.+|.+                         .|.+|+|+|+ +.+|++|+.||.|+|||+
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~-------------------------~V~~lafsP~~~~lLASgS~DgtIrIWDi  104 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTS-------------------------SILDLQFNPCFSEILASGSEDLTIRVWEI  104 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCC-------------------------CEEEEEEcCCCCCEEEEEeCCCeEEEEEC
Confidence            66788999999888888889999988                         7888888885 789999999999999999


Q ss_pred             CCCc--------EEEEEe-CCCCeeEEEEcCCCCEE-EEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC
Q psy10063        506 HDRQ--------LLKTYT-TERPVNSAALSPILPHV-VLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP  575 (894)
Q Consensus       506 ~~~~--------~~~~~~-~~~~v~~l~~spdg~~l-~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~  575 (894)
                      ..+.        ++..+. |...|.+++|+|++..+ ++++.|+.              |++||++.++.+..+. |...
T Consensus       105 ~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dgt--------------IrIWDl~tg~~~~~i~-~~~~  169 (568)
T PTZ00420        105 PHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSF--------------VNIWDIENEKRAFQIN-MPKK  169 (568)
T ss_pred             CCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCe--------------EEEEECCCCcEEEEEe-cCCc
Confidence            8642        223444 46789999999999876 56777876              8999999988877775 5678


Q ss_pred             eEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        576 INSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       576 V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      |.+++|+++|.+|++++.|+.|+|||++.++
T Consensus       170 V~SlswspdG~lLat~s~D~~IrIwD~Rsg~  200 (568)
T PTZ00420        170 LSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE  200 (568)
T ss_pred             EEEEEECCCCCEEEEEecCCEEEEEECCCCc
Confidence            9999999999999999999999999997653

>KOG2055|consensus

Probab=99.90  E-value=5.7e-22  Score=207.42  Aligned_cols=280  Identities=18%  Similarity=0.268  Sum_probs=218.8

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      .+.|++|.|+|...+|++|+.||.++||.++ |+   .++.+...+.                         +|.+++|.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvD-Gk~N~~lqS~~l~~f-------------------------Pi~~a~f~  266 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVD-GKVNPKLQSIHLEKF-------------------------PIQKAEFA  266 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEec-CccChhheeeeeccC-------------------------ccceeeec
Confidence            4789999999999999999999999999987 43   2333333333                         78888888


Q ss_pred             cCCC-EEEEEECCCCEEEEEcCCCcEEEEEe--C--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        486 KDAT-MFITASKDHTAKLFTTHDRQLLKTYT--T--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       486 pdg~-~L~sgs~Dg~V~iwdl~~~~~~~~~~--~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      |+|. .+++++....+++||+.+.+..+.-.  +  +..+.....++++.+|+..|..|.              |.+...
T Consensus       267 p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~--------------I~lLha  332 (514)
T KOG2055|consen  267 PNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGH--------------IHLLHA  332 (514)
T ss_pred             CCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCce--------------EEeehh
Confidence            9888 88999999999999999887665433  2  246788899999999999999997              777778


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      .+++.+..++ -.+.|..+.|+.||+.|++++.+|.|.+||++....                         ++.|..  
T Consensus       333 kT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~-------------------------~~rf~D--  384 (514)
T KOG2055|consen  333 KTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSC-------------------------LHRFVD--  384 (514)
T ss_pred             hhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcce-------------------------EEEEee--
Confidence            8888887775 467899999999999999999999999999975421                         111100  


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       385 --------------------------------------------------------------------------------  384 (514)
T KOG2055|consen  385 --------------------------------------------------------------------------------  384 (514)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce------
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA------  794 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~------  794 (894)
                                                  +|.         -.-..+|.++++.|||+|+..|.|-|||..+...      
T Consensus       385 ----------------------------~G~---------v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkP  427 (514)
T KOG2055|consen  385 ----------------------------DGS---------VHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKP  427 (514)
T ss_pred             ----------------------------cCc---------cceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCc
Confidence                                        000         0124677889999999999999999999554322      


Q ss_pred             ---eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc---CCCCCeeEEEEeeCCcEEEEecCCCc
Q psy10063        795 ---TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK---GHFGPINSLAFHPDGKSYASGGEDGF  868 (894)
Q Consensus       795 ---~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~---gH~~~V~~l~fSpdg~~LaS~s~Dg~  868 (894)
                         +..+...+..+.|++|++.|+.++.....  .+||..+.+.....-+.   ..-+.|+||+|||.|.+||.|-++|.
T Consensus       428 ik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~kn--alrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~gr  505 (514)
T KOG2055|consen  428 IKTVDNLTTAITSLQFNHDAQILAIASRVKKN--ALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGR  505 (514)
T ss_pred             hhhhhhhheeeeeeeeCcchhhhhhhhhcccc--ceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCc
Confidence               22334567889999999999998876533  58999888776655444   33456999999999999999999999


Q ss_pred             EEEEecC
Q psy10063        869 VRLHTFD  875 (894)
Q Consensus       869 V~vWdl~  875 (894)
                      |.||.+.
T Consensus       506 v~l~kL~  512 (514)
T KOG2055|consen  506 VHLFKLH  512 (514)
T ss_pred             eeeEeec
Confidence            9999985

>KOG0973|consensus

Probab=99.90  E-value=1.9e-22  Score=231.76  Aligned_cols=255  Identities=15%  Similarity=0.110  Sum_probs=203.6

Q ss_pred             ceEEEEEecCCCEEEEEE--CCCCEEEEEcCC------------CcEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063        478 PINDMQFSKDATMFITAS--KDHTAKLFTTHD------------RQLLKTY-TTERPVNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs--~Dg~V~iwdl~~------------~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                      .|.+|+.+|||..+++|+  .||.++||..+.            .+.+..+ .|.+.|.|+.|++||++||+|+.|+.+.
T Consensus        15 ~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~   94 (942)
T KOG0973|consen   15 SIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVM   94 (942)
T ss_pred             eEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEE
Confidence            578888888999999998  888888997542            1222223 3668999999999999999999999999


Q ss_pred             EEeccCccceeeE-----EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeee
Q psy10063        543 VTTTSTKVGKFDA-----RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSS  617 (894)
Q Consensus       543 v~~~~~~~~~~~v-----~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~  617 (894)
                      +|.... .+...+     ..-+++..+++..|.+|...|..++|+|++.+|++++.|+.|.||+..+.+           
T Consensus        95 iW~~~~-~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~-----------  162 (942)
T KOG0973|consen   95 IWERAE-IGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE-----------  162 (942)
T ss_pred             Eeeecc-cCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccce-----------
Confidence            998874 111111     122345557788899999999999999999999999999999999875431           


Q ss_pred             EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063        618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL  697 (894)
Q Consensus       618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  697 (894)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (942)
T KOG0973|consen  163 --------------------------------------------------------------------------------  162 (942)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE
Q psy10063        698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL  777 (894)
Q Consensus       698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat  777 (894)
                                                                            ...++.+|.+.|..+.|.|-|+|||+
T Consensus       163 ------------------------------------------------------~~~vl~~H~s~VKGvs~DP~Gky~AS  188 (942)
T KOG0973|consen  163 ------------------------------------------------------LLKVLRGHQSLVKGVSWDPIGKYFAS  188 (942)
T ss_pred             ------------------------------------------------------eeeeeecccccccceEECCccCeeee
Confidence                                                                  11245678888999999999999999


Q ss_pred             ecCCCcEEEEEccCCceeecccc---------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCe
Q psy10063        778 ALADKVSERYRDRKNKATAGFLL---------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI  848 (894)
Q Consensus       778 gs~Dg~I~iwd~~~~~~~~~~~~---------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V  848 (894)
                      -+.|++|+||+..+....+.+..         ...++.|||||++|++.-+-..+...+.|.+..+.+.-..|.||.++|
T Consensus       189 qsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~  268 (942)
T KOG0973|consen  189 QSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPV  268 (942)
T ss_pred             ecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCce
Confidence            99999999999877655443321         234677999999999998877777789999998888888899999999


Q ss_pred             eEEEEeeC-------------Cc----EEEEecCCCcEEEEecCccc
Q psy10063        849 NSLAFHPD-------------GK----SYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       849 ~~l~fSpd-------------g~----~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      .+++|.|-             ..    .+|+||.|++|-||.....+
T Consensus       269 evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~R  315 (942)
T KOG0973|consen  269 EVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPR  315 (942)
T ss_pred             EEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCC
Confidence            99999872             11    67899999999999975443

>KOG0647|consensus

Probab=99.90  E-value=1.7e-21  Score=194.05  Aligned_cols=268  Identities=15%  Similarity=0.167  Sum_probs=203.2

Q ss_pred             cCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCC-CeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        407 DQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRM-GREL-ESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       407 ~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~t-g~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      ...+.|.+|+|||. ..+|+.|+.|++||+|++.. |..+ +....|.+                         +|.+++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~-------------------------PvL~v~   79 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDG-------------------------PVLDVC   79 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCC-------------------------CeEEEE
Confidence            35688999999994 44666899999999999976 3433 23334555                         788888


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCC--EEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILP--HVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~--~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      |+.||..+++|+.|+.+++|||.+++..+.-.|.++|.++.|-+...  .|++|+.|..              ||+||.+
T Consensus        80 WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKT--------------lKfWD~R  145 (347)
T KOG0647|consen   80 WSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKT--------------LKFWDTR  145 (347)
T ss_pred             EccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccc--------------eeecccC
Confidence            99999999999999999999999998888888999999999988765  7889998887              9999999


Q ss_pred             ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063        562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST  641 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~  641 (894)
                      ...++..+.. .+.|+++..-  ..+++.+..++.|.+|.|+.+......                              
T Consensus       146 ~~~pv~t~~L-PeRvYa~Dv~--~pm~vVata~r~i~vynL~n~~te~k~------------------------------  192 (347)
T KOG0647|consen  146 SSNPVATLQL-PERVYAADVL--YPMAVVATAERHIAVYNLENPPTEFKR------------------------------  192 (347)
T ss_pred             CCCeeeeeec-cceeeehhcc--CceeEEEecCCcEEEEEcCCCcchhhh------------------------------
Confidence            8888887753 3567776653  347888888999999999765311000                              


Q ss_pred             CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063        642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV  721 (894)
Q Consensus       642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v  721 (894)
                                                                                                      
T Consensus       193 --------------------------------------------------------------------------------  192 (347)
T KOG0647|consen  193 --------------------------------------------------------------------------------  192 (347)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-------
Q psy10063        722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-------  794 (894)
Q Consensus       722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-------  794 (894)
                                                       +.....-.+.||+..+|.+..|.|+-+|.+.|..+.....       
T Consensus       193 ---------------------------------~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFk  239 (347)
T KOG0647|consen  193 ---------------------------------IESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFK  239 (347)
T ss_pred             ---------------------------------hcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEE
Confidence                                             0000011244566666666667777777776666555311       


Q ss_pred             eec-------cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEe
Q psy10063        795 TAG-------FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG  863 (894)
Q Consensus       795 ~~~-------~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~  863 (894)
                      +++       ....+.+++|.|.-..|+++++|+    .+.+||-+....|...+.|..+|.+.+|+.+|.++|-+
T Consensus       240 CHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDG----tf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA  311 (347)
T KOG0647|consen  240 CHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDG----TFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA  311 (347)
T ss_pred             EeccCCCCCCceEEecceEeecccceEEEecCCc----eEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence            111       123456788999999999999998    69999999888888889999999999999999988864

>KOG0640|consensus

Probab=99.89  E-value=2.7e-22  Score=199.55  Aligned_cols=196  Identities=17%  Similarity=0.238  Sum_probs=163.5

Q ss_pred             CCCccceeeeeccCccEEEecCCC-----------------------------eEEEEEecCCCCEEEEEEccCCCEEEE
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEP-----------------------------VVKMQVTDQSAKITSLLWGNLDQYIIT  426 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------~~~~~l~~H~~~V~~l~~spdg~~L~s  426 (894)
                      .+-...|..+|++||.+++.++.+                             .+...|.+|.+.|.+|.|+|...+|++
T Consensus       110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS  189 (430)
T KOG0640|consen  110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS  189 (430)
T ss_pred             ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence            445567888999999999877542                             234477789999999999999999999


Q ss_pred             ecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC
Q psy10063        427 GHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH  506 (894)
Q Consensus       427 gs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~  506 (894)
                      |+.|++|++||+..-...+.++.-..                       ...|.+|.|+|.|.+|+.|...-.+++||+.
T Consensus       190 ~srD~tvKlFDfsK~saKrA~K~~qd-----------------------~~~vrsiSfHPsGefllvgTdHp~~rlYdv~  246 (430)
T KOG0640|consen  190 GSRDNTVKLFDFSKTSAKRAFKVFQD-----------------------TEPVRSISFHPSGEFLLVGTDHPTLRLYDVN  246 (430)
T ss_pred             ccCCCeEEEEecccHHHHHHHHHhhc-----------------------cceeeeEeecCCCceEEEecCCCceeEEecc
Confidence            99999999999875443332221111                       0178999999999999999999999999999


Q ss_pred             CCcEEEEEe----CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-CCCC-CeEEEE
Q psy10063        507 DRQLLKTYT----TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFG-PINSLA  580 (894)
Q Consensus       507 ~~~~~~~~~----~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-~h~~-~V~~l~  580 (894)
                      +.+|.....    |.+.|.++.+++.|+..+.++.||.              |++||-.+++++..+. .|.+ .|.+..
T Consensus       247 T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~--------------IklwDGVS~rCv~t~~~AH~gsevcSa~  312 (430)
T KOG0640|consen  247 TYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGA--------------IKLWDGVSNRCVRTIGNAHGGSEVCSAV  312 (430)
T ss_pred             ceeEeeecCcccccccceeEEEecCCccEEEEeccCCc--------------EEeeccccHHHHHHHHhhcCCceeeeEE
Confidence            998876543    4578999999999999999999997              9999999999998874 4654 799999


Q ss_pred             EecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        581 FHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       581 ~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      |..+|+||++.+.|..|++|.+.+++.+
T Consensus       313 Ftkn~kyiLsSG~DS~vkLWEi~t~R~l  340 (430)
T KOG0640|consen  313 FTKNGKYILSSGKDSTVKLWEISTGRML  340 (430)
T ss_pred             EccCCeEEeecCCcceeeeeeecCCceE
Confidence            9999999999999999999999988754

>KOG0277|consensus

Probab=99.89  E-value=4.1e-22  Score=193.75  Aligned_cols=253  Identities=17%  Similarity=0.179  Sum_probs=186.5

Q ss_pred             EEEEEccC-CCEEEEe-------cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        413 TSLLWGNL-DQYIITG-------HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       413 ~~l~~spd-g~~L~sg-------s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      .++.|||- ..+|+.+       ...|.+.|.++..++.+.++..-        .+.               ..+..++|
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~--------d~~---------------D~LfdV~W   68 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSY--------DTE---------------DGLFDVAW   68 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEee--------ecc---------------cceeEeee
Confidence            57789982 2234333       23578888888644444433211        010               05777788


Q ss_pred             ec-CCCEEEEEECCCCEEEEEcC-CCcEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        485 SK-DATMFITASKDHTAKLFTTH-DRQLLKTYT-TERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       485 sp-dg~~L~sgs~Dg~V~iwdl~-~~~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      ++ ....+++++.||.++|||+. ...+++.++ |...|.++.|.+..+ .+++++-|+.              ||+|+.
T Consensus        69 se~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~T--------------iKLW~~  134 (311)
T KOG0277|consen   69 SENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGT--------------IKLWDP  134 (311)
T ss_pred             cCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCc--------------eEeecC
Confidence            77 45678899999999999965 345677776 568999999998655 4556666776              999999


Q ss_pred             cccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      ..+..++.+.||...|+..+|+| ....|++++.||.+++||++...                 +.+             
T Consensus       135 ~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g-----------------k~~-------------  184 (311)
T KOG0277|consen  135 NRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG-----------------KFM-------------  184 (311)
T ss_pred             CCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC-----------------cee-------------
Confidence            99999999999999999999999 46789999999999999985321                 000             


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (311)
T KOG0277|consen  185 --------------------------------------------------------------------------------  184 (311)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCceeecc
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKATAGF  798 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~~~  798 (894)
                                                         .+..|...|.|+.|+.- ...|++|+.|+.||+||++..+     
T Consensus       185 -----------------------------------~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-----  224 (311)
T KOG0277|consen  185 -----------------------------------SIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-----  224 (311)
T ss_pred             -----------------------------------EEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-----
Confidence                                               12235556778887764 5678899999999999876533     


Q ss_pred             ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC-cEEEEecCCCcEEEEecC-c
Q psy10063        799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFVRLHTFD-Q  876 (894)
Q Consensus       799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg-~~LaS~s~Dg~V~vWdl~-~  876 (894)
                                                           ..+..|.+|.-.|+.|.|||.. .+||+++.|-++|||+.+ .
T Consensus       225 -------------------------------------~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~  267 (311)
T KOG0277|consen  225 -------------------------------------TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ  267 (311)
T ss_pred             -------------------------------------ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc
Confidence                                                 2356678999999999999976 589999999999999998 4


Q ss_pred             cccccccccCccc
Q psy10063        877 AYFDYTFDISEEF  889 (894)
Q Consensus       877 ~~~~~~~~~~~~~  889 (894)
                      ..++.+++...|+
T Consensus       268 ds~~e~~~~HtEF  280 (311)
T KOG0277|consen  268 DSAIETVDHHTEF  280 (311)
T ss_pred             hhhhhhhhccceE
Confidence            4566666655444

>KOG0289|consensus

Probab=99.89  E-value=1.4e-21  Score=202.84  Aligned_cols=190  Identities=21%  Similarity=0.266  Sum_probs=166.0

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      +...|.||...|..+.|+++...+++++.|..|+||.+....+...+..|..                         +|.
T Consensus       253 ~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~-------------------------~V~  307 (506)
T KOG0289|consen  253 ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEE-------------------------PVT  307 (506)
T ss_pred             hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccc-------------------------cce
Confidence            3448899999999999999999999999999999999988888888888887                         788


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      .+..+|.|+||++++.||.+.+.|+++|.++....++   -.+.+.+|+|||-.|..|..++.              |++
T Consensus       308 ~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~--------------vki  373 (506)
T KOG0289|consen  308 GLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGV--------------VKI  373 (506)
T ss_pred             eeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCce--------------EEE
Confidence            8888999999999999999999999999998877764   45899999999999999999886              999


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc-----CCCceeeeEECcCCcEEEec
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS-----EGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~-----~~~~v~~~~~spdg~~l~~~  629 (894)
                      ||+.++..+..|.+|.++|..|+|+.+|-||+++..|+.|++||++..+.++     +...+.++.|.+.|.+++..
T Consensus       374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~  450 (506)
T KOG0289|consen  374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA  450 (506)
T ss_pred             EEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence            9999999999999999999999999999999999999999999998876332     33345666666666666443

>KOG2048|consensus

Probab=99.89  E-value=6.3e-20  Score=200.61  Aligned_cols=427  Identities=12%  Similarity=0.084  Sum_probs=273.9

Q ss_pred             eeeeeccCccEEEecCCCe----------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE--ecC
Q psy10063        382 RLNSMSPAARKLATNAEPV----------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES--ISG  449 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~~----------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~--l~~  449 (894)
                      ..++|++.||++-.+..+.          .++.+....+.|++++.+|.+..|+.|++||.+.++++..++....  |..
T Consensus        73 E~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~r  152 (691)
T KOG2048|consen   73 ESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMR  152 (691)
T ss_pred             eeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeeccc
Confidence            4457777777766655443          2335556679999999999999999999999888888888776433  333


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCCCc--------------------------cceEEEEEecCCCEEEEEECCCCEEEE
Q psy10063        450 HAKEPINDMQFSKDATMFITASHSQAV--------------------------EPINDMQFSKDATMFITASKDHTAKLF  503 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~d~~i--------------------------~~V~~l~~spdg~~L~sgs~Dg~V~iw  503 (894)
                      .++ +|.++.|.+++..|+.|+.||.|                          .-|+++.|-.++ .|++|...|.|++|
T Consensus       153 q~s-RvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FW  230 (691)
T KOG2048|consen  153 QKS-RVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFW  230 (691)
T ss_pred             ccc-eEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEE
Confidence            334 99999999999999999999965                          257788888665 58999999999999


Q ss_pred             EcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe
Q psy10063        504 TTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  582 (894)
Q Consensus       504 dl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s  582 (894)
                      |...|.+++.+. |...|.||+..+++.+++++|.|+.+..+.......+|     -     .......|...|.+++..
T Consensus       231 d~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~w-----v-----~~~~r~~h~hdvrs~av~  300 (691)
T KOG2048|consen  231 DSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEW-----V-----INSRRDLHAHDVRSMAVI  300 (691)
T ss_pred             cccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccce-----e-----eeccccCCcccceeeeee
Confidence            999999999888 46899999999999999999999987555444443322     1     122335688899999998


Q ss_pred             cCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC-eEEEEecccCCCCCCCeeeeccccCCCceE
Q psy10063        583 PDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG-HIHSLSSHSTSSTDTGGVFSGSRVDDSGVE  661 (894)
Q Consensus       583 pdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g-~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~  661 (894)
                      ++  .|++|+.|..|.+-.....+...+.   . ....|.+..+..... .+..+.                  .+..+.
T Consensus       301 ~~--~l~sgG~d~~l~i~~s~~~~~~~h~---~-~~~~p~~~~v~~a~~~~L~~~w------------------~~h~v~  356 (691)
T KOG2048|consen  301 EN--ALISGGRDFTLAICSSREFKNMDHR---Q-KNLFPASDRVSVAPENRLLVLW------------------KAHGVD  356 (691)
T ss_pred             cc--eEEecceeeEEEEccccccCchhhh---c-cccccccceeecCccceEEEEe------------------cccccc
Confidence            76  8999999999988766542211111   0 001111111111111 111110                  122233


Q ss_pred             EechhhHHHhhhcccccCCCCeEEeeccCCcceeEec-cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeecc
Q psy10063        662 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT-KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGH  740 (894)
Q Consensus       662 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~  740 (894)
                      +|..+.....         |      .++......+. ++.+..   ...+++++|.+++++.....        +++..
T Consensus       357 lwrlGS~~~~---------g------~~~~~~Llkl~~k~~~nI---s~~aiSPdg~~Ia~st~~~~--------~iy~L  410 (691)
T KOG2048|consen  357 LWRLGSVILQ---------G------EYNYIHLLKLFTKEKENI---SCAAISPDGNLIAISTVSRT--------KIYRL  410 (691)
T ss_pred             ceeccCcccc---------c------ccChhhheeeecCCccce---eeeccCCCCCEEEEeeccce--------EEEEe
Confidence            3332221110         0      11111111111 111111   12467888888888543322        22110


Q ss_pred             ccCcccccCCCC----cceecCCCCceEEEeeCCCCCEEEEec-CCCcEEEEEccCCce--eecc-----ccCCCceEee
Q psy10063        741 IEGTPFKLDGSD----TPILAGPVDIGFKMPEPPKREKLALAL-ADKVSERYRDRKNKA--TAGF-----LLSCPDFLFD  808 (894)
Q Consensus       741 ~~g~~~~~dg~~----~~~~~~h~~~v~~la~spdg~~Latgs-~Dg~I~iwd~~~~~~--~~~~-----~~~~~~~~fS  808 (894)
                            .+++..    +.......-.+..+.|+-|+..++..+ .+..+.++++.....  +..+     ...+..++.|
T Consensus       411 ------~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~S  484 (691)
T KOG2048|consen  411 ------QPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVS  484 (691)
T ss_pred             ------ccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEc
Confidence                  011100    000111122355677888887777776 666777777654432  2222     2335567899


Q ss_pred             cCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee-CCcEEEEecCCCcEEEEecCccccc
Q psy10063        809 FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       809 ~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp-dg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      +||+++++++..+    .|.+|+++.++...-...-...|++++|+| +...|+.+..|+.|.-||++..++.
T Consensus       485 sdG~yiaa~~t~g----~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~nQv~efdi~~~~l~  553 (691)
T KOG2048|consen  485 SDGNYIAAISTRG----QIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSNNQVFEFDIEARNLT  553 (691)
T ss_pred             CCCCEEEEEeccc----eEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecCCeEEEEecchhhhh
Confidence            9999999999777    599999998765443323447899999995 5578999999999999999655543

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=7.3e-20  Score=198.97  Aligned_cols=286  Identities=12%  Similarity=0.052  Sum_probs=198.6

Q ss_pred             ccCccEEEecC-CCeEEEEEecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCC
Q psy10063        387 SPAARKLATNA-EPVVKMQVTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDA  464 (894)
Q Consensus       387 s~dg~~l~~~~-~~~~~~~l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg  464 (894)
                      +.||.+.+... .......+.+| ..+.+++|+|+|++| ++++.++.|++||+.+++.+..+..+..            
T Consensus         8 ~~d~~v~~~d~~t~~~~~~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~------------   74 (300)
T TIGR03866         8 EKDNTISVIDTATLEVTRTFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD------------   74 (300)
T ss_pred             cCCCEEEEEECCCCceEEEEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC------------
Confidence            34454443332 22333445544 447889999999976 5677889999999999988777765442            


Q ss_pred             CEEEEEeCCCCccceEEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        465 TMFITASHSQAVEPINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       465 ~~la~~~~d~~i~~V~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                                    +..++|+|++++|+++ +.|+.|++||++.++++..+..+..+.+++|+|+|++|+++..++..  
T Consensus        75 --------------~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~--  138 (300)
T TIGR03866        75 --------------PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNM--  138 (300)
T ss_pred             --------------ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCe--
Confidence                          4456778888766554 56899999999999888888776678899999999999998876542  


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCccccCCCceeeeEECcC
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGLDISEGSFTSSSTQQPD  622 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~~~~~~~~v~~~~~spd  622 (894)
                                 +.+||...++.+..+.. ...+.+++|+++|++|+.+ ..++.|++||++.++.+.             
T Consensus       139 -----------~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~-------------  193 (300)
T TIGR03866       139 -----------AHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIK-------------  193 (300)
T ss_pred             -----------EEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeee-------------
Confidence                       56678877776654432 2345789999999988654 468999999997643210             


Q ss_pred             CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063        623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ  702 (894)
Q Consensus       623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~  702 (894)
                                  .+....            .                                                 
T Consensus       194 ------------~~~~~~------------~-------------------------------------------------  200 (300)
T TIGR03866       194 ------------KITFEI------------P-------------------------------------------------  200 (300)
T ss_pred             ------------eeeecc------------c-------------------------------------------------
Confidence                        000000            0                                                 


Q ss_pred             eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe-cCC
Q psy10063        703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA-LAD  781 (894)
Q Consensus       703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg-s~D  781 (894)
                                                                     +    ... .......++|+|++++++++ ..+
T Consensus       201 -----------------------------------------------~----~~~-~~~~~~~i~~s~dg~~~~~~~~~~  228 (300)
T TIGR03866       201 -----------------------------------------------G----VHP-EAVQPVGIKLTKDGKTAFVALGPA  228 (300)
T ss_pred             -----------------------------------------------c----ccc-ccCCccceEECCCCCEEEEEcCCC
Confidence                                                           0    000 00012356788999886553 456


Q ss_pred             CcEEEEEccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063        782 KVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       782 g~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      +.|.+||+++++.+....  .....++|+|+|++|+++.+...   .|+|||++.++++..++.+ ...+.|+|+|
T Consensus       229 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~---~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~  300 (300)
T TIGR03866       229 NRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSN---DVSVIDVAALKVIKSIKVG-RLPWGVVVRP  300 (300)
T ss_pred             CeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCC---eEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence            679999998877654332  34557889999999988754322   6999999999999999865 5568888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1332|consensus

Probab=99.89  E-value=8.2e-22  Score=190.64  Aligned_cols=165  Identities=19%  Similarity=0.286  Sum_probs=130.4

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC---eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG---RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg---~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .-..|.+.|..+...-.|++||+++.|++|+|+.++..   +++.+|.||.+                         +|+
T Consensus         6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~G-------------------------PVw   60 (299)
T KOG1332|consen    6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSG-------------------------PVW   60 (299)
T ss_pred             hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCC-------------------------Cee
Confidence            45679999999999999999999999999999999754   56889999998                         566


Q ss_pred             EEEEec--CCCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcccee
Q psy10063        481 DMQFSK--DATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       481 ~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .++|..  -|.+||+|++||.|.||.-..|+..+...   |...|.+++|-|.  |-.|++++.||.+.|..++.. +.+
T Consensus        61 qv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-g~w  139 (299)
T KOG1332|consen   61 KVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-GGW  139 (299)
T ss_pred             EEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-CCc
Confidence            666644  79999999999999999998886555444   4678999999885  568899999998655444333 111


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecC---C-----------CEEEEEeCCCcEEEEECCC
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPD---G-----------KSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd---g-----------~~l~sgs~Dg~I~vwdl~~  604 (894)
                                ...+....|.-.|.+++|.|-   |           +.|++|+.|..|+||+.+.
T Consensus       140 ----------~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~  194 (299)
T KOG1332|consen  140 ----------TTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDS  194 (299)
T ss_pred             ----------cchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCC
Confidence                      112334679999999999985   4           4688999999999998754

>KOG1445|consensus

Probab=99.89  E-value=1.5e-21  Score=209.90  Aligned_cols=169  Identities=12%  Similarity=0.134  Sum_probs=124.5

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .|.+|.+.|..+.|+| +..+|++|+.|..|+||.+..|-. +.|..      ..+.|.+..            ..|.|+
T Consensus        74 ~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~-q~LSa------pe~~~g~~~------------~~vE~l  134 (1012)
T KOG1445|consen   74 ILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHS-QKLSA------PEIDVGGGN------------VIVECL  134 (1012)
T ss_pred             eeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcc-cccCC------cceeecCCc------------eEEEEe
Confidence            6789999999999999 455999999999999999984432 11211      011222211            167888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      .|+|-..-|+..+..|.|+|||+.+++.+..+.. .+.|.++.|+.||+.|++++.+..              |+|||.+
T Consensus       135 ~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkq--------------irifDPR  200 (1012)
T KOG1445|consen  135 RFHPTADGILASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQ--------------IRIFDPR  200 (1012)
T ss_pred             ecccCcCceEEeccCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcc--------------eEEeCCc
Confidence            9988544455555679999999999999888775 588999999999999999998887              8888876


Q ss_pred             c-cceEEEccCCCC-CeEEEEEecCCCEEEEEeCC----CcEEEEECCCC
Q psy10063        562 F-EEEFARIKGHFG-PINSLAFHPDGKSYASGGED----GFLISNTLSNG  605 (894)
Q Consensus       562 ~-~~~~~~l~~h~~-~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~~  605 (894)
                      . ++.++...+|.+ .-..+.|...-.+|++.+.+    ..|++||.+..
T Consensus       201 a~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV~~~Dtr~f  250 (1012)
T KOG1445|consen  201 ASMEPIQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRIREVRAYDTRKF  250 (1012)
T ss_pred             cCCCccccccccccchhheeeeccchhhhhhcccchhhheeeeeeecccc
Confidence            3 567777788866 33456776655567766544    46889988653

>KOG1036|consensus

Probab=99.88  E-value=2.6e-20  Score=186.56  Aligned_cols=155  Identities=13%  Similarity=0.161  Sum_probs=129.4

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ..+.|.+|.|+|.+..|+.++.||.+++||+...+....++ |..                         ++.+++|.+ 
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~-------------------------plL~c~F~d-   64 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGA-------------------------PLLDCAFAD-   64 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCC-------------------------ceeeeeccC-
Confidence            36889999999999999999999999999998876555555 555                         567777765 


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA  567 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~  567 (894)
                      ...+++|+.||.|+++|+..+.....-.|...|.||.+++....+++|+.|+.              |++||.+....+.
T Consensus        65 ~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~--------------ik~wD~R~~~~~~  130 (323)
T KOG1036|consen   65 ESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKT--------------IKFWDPRNKVVVG  130 (323)
T ss_pred             CceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCcc--------------EEEEecccccccc
Confidence            45689999999999999999999998889999999999998889999999997              8999988655554


Q ss_pred             EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        568 RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       568 ~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .+.. ...|.++..  .|..|+.|..|..|.+||++...
T Consensus       131 ~~d~-~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~  166 (323)
T KOG1036|consen  131 TFDQ-GKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLD  166 (323)
T ss_pred             cccc-CceEEEEec--cCCEEEEeecCceEEEEEccccc
Confidence            4432 337888876  46789999999999999998765

>KOG0283|consensus

Probab=99.88  E-value=1.4e-21  Score=219.66  Aligned_cols=185  Identities=18%  Similarity=0.305  Sum_probs=160.2

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC-CCCEEEEEeCCCCc------
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK-DATMFITASHSQAV------  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp-dg~~la~~~~d~~i------  476 (894)
                      .+.||.+.|..|.||..+ +|++++.|.+||||++...+|++.|. |.. .|.||+|.| |.+||++|+-|+++      
T Consensus       364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-Hnd-fVTcVaFnPvDDryFiSGSLD~KvRiWsI~  440 (712)
T KOG0283|consen  364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HND-FVTCVAFNPVDDRYFISGSLDGKVRLWSIS  440 (712)
T ss_pred             hhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCC-eeEEEEecccCCCcEeecccccceEEeecC
Confidence            344699999999999865 99999999999999999999999987 776 999999999 88999999999988      


Q ss_pred             -----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---C------CCCeeEEEEcCCCC-EEEEE
Q psy10063        477 -----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---T------ERPVNSAALSPILP-HVVLG  535 (894)
Q Consensus       477 -----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~------~~~v~~l~~spdg~-~l~~~  535 (894)
                                 .-|++++|.|||++.+.|+.+|.+++|+.+..++...+.   +      +.+|..+.|.|... .|++.
T Consensus       441 d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVT  520 (712)
T KOG0283|consen  441 DKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVT  520 (712)
T ss_pred             cCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEe
Confidence                       589999999999999999999999999999888765543   1      23799999997544 57777


Q ss_pred             ECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        536 GGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       536 ~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +.|..              |||||.+...++.+|+|+..  .-....|+.||++|+++++|..|+||+++..
T Consensus       521 SnDSr--------------IRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  521 SNDSR--------------IRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSF  578 (712)
T ss_pred             cCCCc--------------eEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence            87776              99999998899999998654  3345688999999999999999999998654

>KOG0299|consensus

Probab=99.88  E-value=4.8e-21  Score=200.80  Aligned_cols=161  Identities=20%  Similarity=0.328  Sum_probs=140.2

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      ++|.+.|.+++.|+||+||++|+.|..|.||+.++++.++.|.+|.+                         .|.+++|-
T Consensus       199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~-------------------------~V~~L~fr  253 (479)
T KOG0299|consen  199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRG-------------------------AVSSLAFR  253 (479)
T ss_pred             ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhccccccc-------------------------ceeeeeee
Confidence            37999999999999999999999999999999999999999999998                         78888888


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      ..-..|++++.|+.|+||++.....+.++. |++.|.+|.....++.+-+|+.|+.              +++|++.. +
T Consensus       254 ~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT--------------~rlwKi~e-e  318 (479)
T KOG0299|consen  254 KGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRT--------------VRLWKIPE-E  318 (479)
T ss_pred             cCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccce--------------eEEEeccc-c
Confidence            878889999999999999999888776655 6789999999988888888889987              77888743 3


Q ss_pred             eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        565 EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       565 ~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                      ....+.+|.+.+-|++|-.+ .+|++|+.+|.|.+|++...+.
T Consensus       319 sqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkp  360 (479)
T KOG0299|consen  319 SQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKP  360 (479)
T ss_pred             ceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCc
Confidence            33456789999999999754 6799999999999999876543

>KOG0641|consensus

Probab=99.88  E-value=5.4e-20  Score=175.50  Aligned_cols=212  Identities=17%  Similarity=0.240  Sum_probs=168.8

Q ss_pred             CCccceeeeeccCccEEEecCCC--------------------------eEEEEEecCCCCEEEEEEccCCCEEEEecCC
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP--------------------------VVKMQVTDQSAKITSLLWGNLDQYIITGHAK  430 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~--------------------------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~D  430 (894)
                      .....|.++|.|.|.+.+.++..                          ++...-+.|.+.|.|.+|||+|++|++|+.|
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd  110 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND  110 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence            33456778899998888776542                          1112334588999999999999999999999


Q ss_pred             CcEEEEecCCCeE-----EEEecCCCCCCeeEEEEcCC----CCEEEEEeCCCC-c------------------cceEEE
Q psy10063        431 GDICTWDLRMGRE-----LESISGHAKEPINDMQFSKD----ATMFITASHSQA-V------------------EPINDM  482 (894)
Q Consensus       431 g~I~iWd~~tg~~-----~~~l~~h~~~~V~~v~~spd----g~~la~~~~d~~-i------------------~~V~~l  482 (894)
                      ..|++..+....+     -.+|.-|.+ -|..++|-.+    |..|++++.... |                  +.|.++
T Consensus       111 k~ik~l~fn~dt~~~~g~dle~nmhdg-tirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal  189 (350)
T KOG0641|consen  111 KTIKVLPFNADTCNATGHDLEFNMHDG-TIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL  189 (350)
T ss_pred             ceEEEEecccccccccCcceeeeecCC-ceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE
Confidence            9999987654332     345667877 9999999654    556777664322 1                  334333


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                       ++=.|-.|++|+.|.+|++||++-..++..+..        ...|.+++..|.|++|++|-.|..              
T Consensus       190 -yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dss--------------  254 (350)
T KOG0641|consen  190 -YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSS--------------  254 (350)
T ss_pred             -EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCc--------------
Confidence             222577899999999999999999888887752        146899999999999999998886              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      ..+||++.++.++.+..|...|.|+.|+|...||++|+.|..|++-|++.
T Consensus       255 c~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg  304 (350)
T KOG0641|consen  255 CMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG  304 (350)
T ss_pred             eEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence            88999999999999999999999999999999999999999999998854

>KOG2445|consensus

Probab=99.87  E-value=2.3e-20  Score=186.34  Aligned_cols=279  Identities=14%  Similarity=0.166  Sum_probs=188.9

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ...+|.+-|.++.|.+.|+++|+|+.|+.|+|||...+    .+-...+.|.+                         .|
T Consensus         8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~-------------------------Si   62 (361)
T KOG2445|consen    8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDG-------------------------SI   62 (361)
T ss_pred             cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCC-------------------------cE
Confidence            34689999999999999999999999999999997543    45566777877                         56


Q ss_pred             EEEEEec--CCCEEEEEECCCCEEEEEcC--C----C-cE--EEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEe
Q psy10063        480 NDMQFSK--DATMFITASKDHTAKLFTTH--D----R-QL--LKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTT  545 (894)
Q Consensus       480 ~~l~~sp--dg~~L~sgs~Dg~V~iwdl~--~----~-~~--~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~  545 (894)
                      ..|.|.+  -|+.||+|+.|++|+||.-.  +    + +.  ...+. ....|..+.|.|.  |-.|++++.||.++||+
T Consensus        63 ~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYE  142 (361)
T KOG2445|consen   63 WRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYE  142 (361)
T ss_pred             EEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEe
Confidence            6666644  58999999999999999652  1    1 11  22232 3578999999996  67889999999877765


Q ss_pred             ccCccceeeEEEEeccccce--EEEccCCCCCeEEEEEecC---CCEEEEEeCC-----CcEEEEECCCCccccCCCcee
Q psy10063        546 TSTKVGKFDARFYHLIFEEE--FARIKGHFGPINSLAFHPD---GKSYASGGED-----GFLISNTLSNGLDISEGSFTS  615 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~--~~~l~~h~~~V~~l~~spd---g~~l~sgs~D-----g~I~vwdl~~~~~~~~~~~v~  615 (894)
                      .-.-.   +++-|.+...-.  +.....+.....||.|.+.   ..+|+.|+.+     +.++||.......        
T Consensus       143 A~dp~---nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~r--------  211 (361)
T KOG2445|consen  143 APDPM---NLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGR--------  211 (361)
T ss_pred             cCCcc---ccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcc--------
Confidence            43322   255555542211  1112246667788888863   3356666654     2455554322100        


Q ss_pred             eeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCccee
Q psy10063        616 SSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  695 (894)
Q Consensus       616 ~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  695 (894)
                                                                                                      
T Consensus       212 --------------------------------------------------------------------------------  211 (361)
T KOG2445|consen  212 --------------------------------------------------------------------------------  211 (361)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC----
Q psy10063        696 ELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK----  771 (894)
Q Consensus       696 ~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd----  771 (894)
                                           +++.                                ...+.+|.+.|..|+|.|.    
T Consensus       212 ---------------------Kw~k--------------------------------va~L~d~~dpI~di~wAPn~Gr~  238 (361)
T KOG2445|consen  212 ---------------------KWLK--------------------------------VAELPDHTDPIRDISWAPNIGRS  238 (361)
T ss_pred             ---------------------eeee--------------------------------ehhcCCCCCcceeeeeccccCCc
Confidence                                 0000                                1124478899999999997    


Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063        772 REKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL  851 (894)
Q Consensus       772 g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l  851 (894)
                      -.+||+++.|| |+||.++...... ...+.    ..+                 ..+.++. -+.+..+.+|.+.|+.|
T Consensus       239 y~~lAvA~kDg-v~I~~v~~~~s~i-~~ee~----~~~-----------------~~~~~l~-v~~vs~~~~H~~~VWrv  294 (361)
T KOG2445|consen  239 YHLLAVATKDG-VRIFKVKVARSAI-EEEEV----LAP-----------------DLMTDLP-VEKVSELDDHNGEVWRV  294 (361)
T ss_pred             eeeEEEeecCc-EEEEEEeeccchh-hhhcc----cCC-----------------CCccccc-eEEeeeccCCCCceEEE
Confidence            36799999999 9999976433211 00000    000                 1111221 24566788999999999


Q ss_pred             EEeeCCcEEEEecCCCcEEEEecC
Q psy10063        852 AFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       852 ~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      +|.--|..|++.|.||+||+|...
T Consensus       295 ~wNmtGtiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  295 RWNMTGTILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             EEeeeeeEEeecCCCceeeehhhh
Confidence            999999999999999999999853

>KOG0288|consensus

Probab=99.87  E-value=2e-21  Score=200.74  Aligned_cols=240  Identities=17%  Similarity=0.193  Sum_probs=195.7

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .|.|..+.|.+++|.++++++++++.|+.++||++..++....|.+|.+                         .|+++.
T Consensus       214 tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtd-------------------------kVt~ak  268 (459)
T KOG0288|consen  214 TLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTD-------------------------KVTAAK  268 (459)
T ss_pred             hhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhccccc-------------------------ceeeeh
Confidence            5666778899999999999999999999999999999999999999998                         677777


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      |......+++|+.|.+|++||+....|.+.+-....+..|+.+  +..++++..|+.              ||+||.+..
T Consensus       269 ~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~Dkk--------------vRfwD~Rs~  332 (459)
T KOG0288|consen  269 FKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFDKK--------------VRFWDIRSA  332 (459)
T ss_pred             hhccccceeeccccchhhhhhhhhhheeccccccccccceEec--ceeeeecccccc--------------eEEEeccCC
Confidence            7766666999999999999999999999888776667777766  456777777775              999999999


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      .+...+..+. .|.+|..+.+|..|++++.|..+.+.|++..+...                         .+.      
T Consensus       333 ~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~-------------------------~~s------  380 (459)
T KOG0288|consen  333 DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQ-------------------------TFS------  380 (459)
T ss_pred             ceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEE-------------------------Eee------
Confidence            9999888776 89999999999999999999999999987643110                         000      


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                              +.                                                              |       
T Consensus       381 --------A~--------------------------------------------------------------g-------  383 (459)
T KOG0288|consen  381 --------AE--------------------------------------------------------------G-------  383 (459)
T ss_pred             --------cc--------------------------------------------------------------c-------
Confidence                    00                                                              0       


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc---
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL---  800 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~---  800 (894)
                                                     ...+|  ....+.|||++.|+|+|+.||.|+||++.++++......   
T Consensus       384 -------------------------------~k~as--DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s  430 (459)
T KOG0288|consen  384 -------------------------------FKCAS--DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTS  430 (459)
T ss_pred             -------------------------------ccccc--ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCC
Confidence                                           00011  145788999999999999999999999999988654443   


Q ss_pred             --CCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063        801 --SCPDFLFDFDTTREVTTTSTKVGKFDARFY  830 (894)
Q Consensus       801 --~~~~~~fS~dg~~l~~as~d~~g~~~I~vw  830 (894)
                        ++.+++|++.|++|++++.++    .+.+|
T Consensus       431 ~~aI~s~~W~~sG~~Llsadk~~----~v~lW  458 (459)
T KOG0288|consen  431 NAAITSLSWNPSGSGLLSADKQK----AVTLW  458 (459)
T ss_pred             CcceEEEEEcCCCchhhcccCCc----ceEec
Confidence              345678999999999988776    47888

>KOG0264|consensus

Probab=99.87  E-value=9.2e-21  Score=199.06  Aligned_cols=261  Identities=17%  Similarity=0.215  Sum_probs=196.0

Q ss_pred             EEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeE----------EEEecCCCCCCeeEEEEcCCCCEEEEEeC
Q psy10063        404 QVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRE----------LESISGHAKEPINDMQFSKDATMFITASH  472 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~----------~~~l~~h~~~~V~~v~~spdg~~la~~~~  472 (894)
                      ...-|.+.|..+.+-|+.. +|++++..+.|.|||...-..          ..+|.+|.+                    
T Consensus       119 ~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~--------------------  178 (422)
T KOG0264|consen  119 QKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEK--------------------  178 (422)
T ss_pred             EeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecc--------------------
Confidence            4456999999999999765 667778889999999854322          124555554                    


Q ss_pred             CCCccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcE-------EEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        473 SQAVEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQL-------LKTYT-TERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       473 d~~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~-------~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                           .-++|+|++ ..-+|++++.|+.|++||+.....       ...+. |...|..++|++....|+...+++..  
T Consensus       179 -----eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~--  251 (422)
T KOG0264|consen  179 -----EGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGK--  251 (422)
T ss_pred             -----cccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCe--
Confidence                 345678877 445799999999999999974322       23344 46789999999987776666555553  


Q ss_pred             EeccCccceeeEEEEecc--ccceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEEC
Q psy10063        544 TTTSTKVGKFDARFYHLI--FEEEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQ  620 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~--~~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~s  620 (894)
                                 +.|||.+  ..+..+..++|.+.|.|++|.|- +..||+|+.|++|++||++....             
T Consensus       252 -----------L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~-------------  307 (422)
T KOG0264|consen  252 -----------LMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK-------------  307 (422)
T ss_pred             -----------EEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc-------------
Confidence                       8899999  56667778899999999999995 55788999999999999965310             


Q ss_pred             cCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccC
Q psy10063        621 PDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKD  700 (894)
Q Consensus       621 pdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~  700 (894)
                                                                                                      
T Consensus       308 --------------------------------------------------------------------------------  307 (422)
T KOG0264|consen  308 --------------------------------------------------------------------------------  307 (422)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEec
Q psy10063        701 EQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALAL  779 (894)
Q Consensus       701 ~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs  779 (894)
                                                                         .+..+.+|.+.|++|.|+|. ...||+++
T Consensus       308 ---------------------------------------------------~lh~~e~H~dev~~V~WSPh~etvLASSg  336 (422)
T KOG0264|consen  308 ---------------------------------------------------PLHTFEGHEDEVFQVEWSPHNETVLASSG  336 (422)
T ss_pred             ---------------------------------------------------CceeccCCCcceEEEEeCCCCCceeEecc
Confidence                                                               11245679999999999998 56788999


Q ss_pred             CCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC--cceeeeccCCCCCeeEEEEeeCC
Q psy10063        780 ADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF--EEEFARIKGHFGPINSLAFHPDG  857 (894)
Q Consensus       780 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t--g~~l~~l~gH~~~V~~l~fSpdg  857 (894)
                      .|+.+.|||+.+-.......                               |.+.  -+++..-.||...|..+.|.|..
T Consensus       337 ~D~rl~vWDls~ig~eq~~e-------------------------------da~dgppEllF~HgGH~~kV~DfsWnp~e  385 (422)
T KOG0264|consen  337 TDRRLNVWDLSRIGEEQSPE-------------------------------DAEDGPPELLFIHGGHTAKVSDFSWNPNE  385 (422)
T ss_pred             cCCcEEEEeccccccccChh-------------------------------hhccCCcceeEEecCcccccccccCCCCC
Confidence            99999999976533211100                               0011  24566677999999999999988


Q ss_pred             cE-EEEecCCCcEEEEecCcc
Q psy10063        858 KS-YASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       858 ~~-LaS~s~Dg~V~vWdl~~~  877 (894)
                      .+ |+|+++|+.+.||++...
T Consensus       386 PW~I~SvaeDN~LqIW~~s~~  406 (422)
T KOG0264|consen  386 PWTIASVAEDNILQIWQMAEN  406 (422)
T ss_pred             CeEEEEecCCceEEEeecccc
Confidence            64 678999999999998744

>KOG0308|consensus

Probab=99.87  E-value=1.3e-21  Score=212.38  Aligned_cols=283  Identities=18%  Similarity=0.165  Sum_probs=214.6

Q ss_pred             CCCCEE---EEEEcc-CCCEEEEecCCCcEEEEecCCCe------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        408 QSAKIT---SLLWGN-LDQYIITGHAKGDICTWDLRMGR------ELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       408 H~~~V~---~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      |...|.   ++..+. .+++|++||.||.|++|++....      .+..++.|.+                         
T Consensus        20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsD-------------------------   74 (735)
T KOG0308|consen   20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSD-------------------------   74 (735)
T ss_pred             ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHh-------------------------
Confidence            445555   555554 56689999999999999986432      3666777776                         


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCC--cEEEEEe-CCCCeeEEEE-cCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDR--QLLKTYT-TERPVNSAAL-SPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~--~~~~~~~-~~~~v~~l~~-spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .|..|+...+|+.|+++|.|-+|++|+...+  -|+..+. |.+.|.|+++ -++...+++||-|+.             
T Consensus        75 WVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~-------------  141 (735)
T KOG0308|consen   75 WVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRK-------------  141 (735)
T ss_pred             HHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCcc-------------
Confidence            6677777778889999999999999999877  5666665 5789999999 777788888888887             


Q ss_pred             eEEEEeccccc--eE--------EEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcC
Q psy10063        554 DARFYHLIFEE--EF--------ARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPD  622 (894)
Q Consensus       554 ~v~vwd~~~~~--~~--------~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spd  622 (894)
                       |.+||+..+.  .+        ..+. |+...|++++..+.|..|++|+..+.|++||.+.++++              
T Consensus       142 -IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~ki--------------  206 (735)
T KOG0308|consen  142 -IFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKI--------------  206 (735)
T ss_pred             -EEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccce--------------
Confidence             6777777652  22        2233 89999999999999999999999999999998654321              


Q ss_pred             CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063        623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ  702 (894)
Q Consensus       623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~  702 (894)
                                                                                                      
T Consensus       207 --------------------------------------------------------------------------------  206 (735)
T KOG0308|consen  207 --------------------------------------------------------------------------------  206 (735)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC
Q psy10063        703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK  782 (894)
Q Consensus       703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg  782 (894)
                                                                         ..++||.+.|.++.++.||..+++++.||
T Consensus       207 ---------------------------------------------------mkLrGHTdNVr~ll~~dDGt~~ls~sSDg  235 (735)
T KOG0308|consen  207 ---------------------------------------------------MKLRGHTDNVRVLLVNDDGTRLLSASSDG  235 (735)
T ss_pred             ---------------------------------------------------eeeeccccceEEEEEcCCCCeEeecCCCc
Confidence                                                               12457999999999999999999999999


Q ss_pred             cEEEEEccCCceeecccc---CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063        783 VSERYRDRKNKATAGFLL---SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS  859 (894)
Q Consensus       783 ~I~iwd~~~~~~~~~~~~---~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~  859 (894)
                      +|++||+...+++..+..   ++.++..+++-..+++|+.++    .|+.=|+........+--...+|..+..+.+..-
T Consensus       236 tIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~----~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~  311 (735)
T KOG0308|consen  236 TIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDG----NIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNS  311 (735)
T ss_pred             eEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCC----cEEecccCCchhheEeecCCCchhhhhhccccCC
Confidence            999999999888766543   344445566667777777776    4888888774332223334456777777755555


Q ss_pred             EEEecCCCcEEEEecCccc
Q psy10063        860 YASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       860 LaS~s~Dg~V~vWdl~~~~  878 (894)
                      +-++..|+.|+-|.++...
T Consensus       312 ~WvtTtds~I~rW~~~~~~  330 (735)
T KOG0308|consen  312 VWVTTTDSSIKRWKLEPDI  330 (735)
T ss_pred             ceeeeccccceecCCcccc
Confidence            5677789999999876443

>KOG1009|consensus

Probab=99.87  E-value=3.2e-20  Score=191.81  Aligned_cols=158  Identities=18%  Similarity=0.231  Sum_probs=130.4

Q ss_pred             CCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeE---------EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        408 QSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRE---------LESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       408 H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~---------~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      ...+|..+.|.+.+. +|++|+.|..|+||.+..++.         +..|..|..                         
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~-------------------------   66 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTR-------------------------   66 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcc-------------------------
Confidence            357899999999776 999999999999998864321         223334444                         


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcC--------C--------CcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTH--------D--------RQLLKTYT-TERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~--------~--------~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      .|.++.|+|+|.+|++|+.+|.|.+|-..        .        ....+.+. |...|+.++|++++.++++++.+..
T Consensus        67 aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns  146 (434)
T KOG1009|consen   67 AVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNS  146 (434)
T ss_pred             eeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccce
Confidence            78999999999999999999999999665        2        11223333 4588999999999999999999997


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                                    +++||+..|..+..+.+|...|..++|.|-.++|++-+.|...+++.+..
T Consensus       147 --------------~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~  196 (434)
T KOG1009|consen  147 --------------VRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKL  196 (434)
T ss_pred             --------------EEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeee
Confidence                          89999999999999999999999999999999999999999777776644

>KOG0772|consensus

Probab=99.87  E-value=7.5e-21  Score=201.05  Aligned_cols=261  Identities=15%  Similarity=0.161  Sum_probs=185.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc----EEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ----LLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      .|.++++.|.|.+|++|+.|-.|++||+....    ..+.+..  ...|.+++|++.|..|++.++....+|++.+...-
T Consensus       169 ~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~  248 (641)
T KOG0772|consen  169 IVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEI  248 (641)
T ss_pred             EEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCcee
Confidence            68899999999999999999999999997532    2233332  36799999999999999999888744443322110


Q ss_pred             eeeEEEEeccccceE---EEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        552 KFDARFYHLIFEEEF---ARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~---~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                         +.+  ++..+.|   ..-+||...+.|.+|+|+.+ .|++++.||++|||++...+..                   
T Consensus       249 ---~e~--~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-------------------  304 (641)
T KOG0772|consen  249 ---VEF--SKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-------------------  304 (641)
T ss_pred             ---eee--eccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh-------------------
Confidence               000  0001111   12368999999999999754 6889999999999998754310                   


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                           ...+.-                                                                     
T Consensus       305 -----~qVik~---------------------------------------------------------------------  310 (641)
T KOG0772|consen  305 -----LQVIKT---------------------------------------------------------------------  310 (641)
T ss_pred             -----eeEEee---------------------------------------------------------------------
Confidence                 000000                                                                     


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                                                               .     ...+..-.+..++|++||.+||.|+.||.|++|
T Consensus       311 -----------------------------------------k-----~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W  344 (641)
T KOG0772|consen  311 -----------------------------------------K-----PAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW  344 (641)
T ss_pred             -----------------------------------------c-----cCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence                                                     0     000112235678999999999999999999999


Q ss_pred             EccCCce------eecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCc-ceeeeccCC--CCCeeEEEEeeC
Q psy10063        788 RDRKNKA------TAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE-EEFARIKGH--FGPINSLAFHPD  856 (894)
Q Consensus       788 d~~~~~~------~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~gH--~~~V~~l~fSpd  856 (894)
                      +......      ...|..  .+.++.||+||++|++-+.|.    .++|||++.. +++....+-  ..+-+.++||||
T Consensus       345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~----tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd  420 (641)
T KOG0772|consen  345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD----TLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPD  420 (641)
T ss_pred             ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCC----ceeeeeccccccchhhhcCCCccCCCCccccCCC
Confidence            9754432      122333  567899999999999998887    5999999865 455544432  234578999999


Q ss_pred             CcEEEEec------CCCcEEEEecCccccccccccC
Q psy10063        857 GKSYASGG------EDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       857 g~~LaS~s------~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      .++|++|.      .-|.+++||-..-+.++++.+.
T Consensus       421 ~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~  456 (641)
T KOG0772|consen  421 DKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS  456 (641)
T ss_pred             ceEEEecccccCCCCCceEEEEeccceeeEEEecCC
Confidence            99999975      4578999998888787777654

>KOG0321|consensus

Probab=99.86  E-value=1.2e-20  Score=204.47  Aligned_cols=301  Identities=16%  Similarity=0.157  Sum_probs=211.1

Q ss_pred             EEEEcc---CCCEEEEecCCCcEEEEecCCCeE------EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        414 SLLWGN---LDQYIITGHAKGDICTWDLRMGRE------LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       414 ~l~~sp---dg~~L~sgs~Dg~I~iWd~~tg~~------~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ++.|++   ...+|+.+.+||.|.|+|......      ++.+..|..                         .|.+++|
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~n-------------------------AifDl~w  108 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKN-------------------------AIFDLKW  108 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccc-------------------------eeEeecc
Confidence            366765   345899999999999999765432      344556666                         7888889


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEE---EeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCcc----ceeeEE
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKT---YTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKV----GKFDAR  556 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~---~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~----~~~~v~  556 (894)
                      .|...+|++++.|.++++||++..+++..   +.|.+.|.++||.++.. .|++|+.|+.+.||++....    ..++.+
T Consensus       109 apge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~  188 (720)
T KOG0321|consen  109 APGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNR  188 (720)
T ss_pred             CCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhh
Confidence            89777899999999999999999988765   44678999999999876 56677888888888765443    233455


Q ss_pred             EEecccc---------ceEEEccCCCCCeEE---EEEecCCCEEEEEeC-CCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063        557 FYHLIFE---------EEFARIKGHFGPINS---LAFHPDGKSYASGGE-DGFLISNTLSNGLDISEGSFTSSSTQQPDG  623 (894)
Q Consensus       557 vwd~~~~---------~~~~~l~~h~~~V~~---l~~spdg~~l~sgs~-Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg  623 (894)
                      +++...+         +.++.-+.|...|.+   +.+..|...||+++. |+.|+|||++.......++...        
T Consensus       189 ~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~--------  260 (720)
T KOG0321|consen  189 IYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRG--------  260 (720)
T ss_pred             hhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCc--------
Confidence            5555444         112223445556666   666678889999887 9999999998654221110000        


Q ss_pred             cEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcce
Q psy10063        624 LVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQI  703 (894)
Q Consensus       624 ~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~  703 (894)
                                 ..                                                                   
T Consensus       261 -----------~~-------------------------------------------------------------------  262 (720)
T KOG0321|consen  261 -----------SD-------------------------------------------------------------------  262 (720)
T ss_pred             -----------cc-------------------------------------------------------------------
Confidence                       00                                                                   


Q ss_pred             eEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCc
Q psy10063        704 EMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKV  783 (894)
Q Consensus       704 ~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~  783 (894)
                                                             +..+.         ....-.+.++.....|.+|.+.+.|+.
T Consensus       263 ---------------------------------------~~~t~---------skrs~G~~nL~lDssGt~L~AsCtD~s  294 (720)
T KOG0321|consen  263 ---------------------------------------KYPTH---------SKRSVGQVNLILDSSGTYLFASCTDNS  294 (720)
T ss_pred             ---------------------------------------CccCc---------ccceeeeEEEEecCCCCeEEEEecCCc
Confidence                                                   00000         000112456666677899999999999


Q ss_pred             EEEEEccCCceeecc-ccCCC------ceEeecCCCeEEEEecCCCCceeEEEeecCCcce-eeeccCCCCCeeEEEEee
Q psy10063        784 SERYRDRKNKATAGF-LLSCP------DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE-FARIKGHFGPINSLAFHP  855 (894)
Q Consensus       784 I~iwd~~~~~~~~~~-~~~~~------~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~-l~~l~gH~~~V~~l~fSp  855 (894)
                      |++|++.....-... ..++.      .-+.+||+.++++++.+.    .+++|.+...+. ...+.||...|.+|+|.|
T Consensus       295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~----~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p  370 (720)
T KOG0321|consen  295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDE----QAYIWVVSSPEAPPALLLGHTREVTTVRWLP  370 (720)
T ss_pred             EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCc----ceeeeeecCccCChhhhhCcceEEEEEeecc
Confidence            999998776542211 11111      234899999999999998    589999987654 466789999999999987


Q ss_pred             CC-cEEEEecCCCcEEEEecCcc
Q psy10063        856 DG-KSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       856 dg-~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      .. .-+|+|++|-.++||++..+
T Consensus       371 S~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  371 SATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             ccCCCceeeccCcceEEEeccCc
Confidence            44 34788899999999998544

>KOG1274|consensus

Probab=99.86  E-value=8.8e-18  Score=189.65  Aligned_cols=235  Identities=16%  Similarity=0.194  Sum_probs=187.2

Q ss_pred             cCCCccceeeeeccCccEEEecCCC-eEEEEE-----------ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe
Q psy10063        375 SSPLSVDRLNSMSPAARKLATNAEP-VVKMQV-----------TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR  442 (894)
Q Consensus       375 ~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~l-----------~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~  442 (894)
                      +.+......++|.++|..|...+.+ .+++.-           .-|...|.+++.  ++.+|++|+.+++|.+|.+..++
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~~   87 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSGE   87 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee--cccceEEeeccceEEEeeCCCCC
Confidence            3444456677899999988766544 333311           115566666654  45699999999999999998887


Q ss_pred             EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEEE
Q psy10063        443 ELESISGHAKEPINDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFT  504 (894)
Q Consensus       443 ~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwd  504 (894)
                      .-..|..-.- ++.+++|+.+|.++|.|+.|-.+                  ++|.+|.|+|.+.+||+.+.||.|+|||
T Consensus        88 ~~~iL~Rftl-p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~  166 (933)
T KOG1274|consen   88 EDTILARFTL-PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWD  166 (933)
T ss_pred             ccceeeeeec-cceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEE
Confidence            6544444444 89999999999999999988766                  6999999999999999999999999999


Q ss_pred             cCCCcEEEEEeC---------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC--CC
Q psy10063        505 THDRQLLKTYTT---------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG--HF  573 (894)
Q Consensus       505 l~~~~~~~~~~~---------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~--h~  573 (894)
                      +.++.+...+..         ...+..++|+|+|..|++.+.++.              |++|+...++....|..  |.
T Consensus       167 ~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~--------------Vkvy~r~~we~~f~Lr~~~~s  232 (933)
T KOG1274|consen  167 LQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT--------------VKVYSRKGWELQFKLRDKLSS  232 (933)
T ss_pred             cccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe--------------EEEEccCCceeheeecccccc
Confidence            999988877653         124577899999988888888886              78888888877777654  44


Q ss_pred             CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEE
Q psy10063        574 GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       574 ~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l  626 (894)
                      ..+.+++|+|.|+|||+++.||.|.|||+++.+.......+.+++|.|++..+
T Consensus       233 s~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~~~~~~~Vc~~aw~p~~n~i  285 (933)
T KOG1274|consen  233 SKFSDLQWSPNGKYIAASTLDGQILVWNVDTHERHEFKRAVCCEAWKPNANAI  285 (933)
T ss_pred             cceEEEEEcCCCcEEeeeccCCcEEEEecccchhccccceeEEEecCCCCCee
Confidence            45999999999999999999999999999986555567788899999987655

>KOG0647|consensus

Probab=99.86  E-value=4.8e-20  Score=183.70  Aligned_cols=240  Identities=17%  Similarity=0.168  Sum_probs=179.4

Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCC-CcEEE--EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHD-RQLLK--TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~-~~~~~--~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .|.+|+||| ...+|+.+|.|++||+|+++. |..+-  ...+.++|.+++|+.||..+++++.|+.             
T Consensus        29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~-------------   95 (347)
T KOG0647|consen   29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQ-------------   95 (347)
T ss_pred             chheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCc-------------
Confidence            688899999 556677999999999999986 45443  2346799999999999999999999997             


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCC--EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGK--SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~--~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                       +++||+.++ .+..+..|.++|.++.|-+...  .|++|+.|++|++||.+...++.                      
T Consensus        96 -~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~----------------------  151 (347)
T KOG0647|consen   96 -AKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVA----------------------  151 (347)
T ss_pred             -eEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeee----------------------
Confidence             899999999 4556778999999999987655  79999999999999997543221                      


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                         .+..                                                                         
T Consensus       152 ---t~~L-------------------------------------------------------------------------  155 (347)
T KOG0647|consen  152 ---TLQL-------------------------------------------------------------------------  155 (347)
T ss_pred             ---eeec-------------------------------------------------------------------------
Confidence               0000                                                                         


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                                      .+.++++.+  ...+++++..++.|.+|.++.
T Consensus       156 ------------------------------------------------PeRvYa~Dv--~~pm~vVata~r~i~vynL~n  185 (347)
T KOG0647|consen  156 ------------------------------------------------PERVYAADV--LYPMAVVATAERHIAVYNLEN  185 (347)
T ss_pred             ------------------------------------------------cceeeehhc--cCceeEEEecCCcEEEEEcCC
Confidence                                                            001122111  135778888999999999866


Q ss_pred             Cceee-----ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc--ceeeeccCCCC---------CeeEEEEee
Q psy10063        792 NKATA-----GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHFG---------PINSLAFHP  855 (894)
Q Consensus       792 ~~~~~-----~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg--~~l~~l~gH~~---------~V~~l~fSp  855 (894)
                      .....     .+...+.+++...|.+..+.++-.+    .+.|..+..+  +.-..|+.|..         .|.+|+|+|
T Consensus       186 ~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEG----rv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP  261 (347)
T KOG0647|consen  186 PPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEG----RVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHP  261 (347)
T ss_pred             CcchhhhhcCcccceeeEEEEEecCCceEeeeecc----eEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeec
Confidence            54322     2233456777788888777777765    4666666665  44455666652         588899999


Q ss_pred             CCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        856 DGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       856 dg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .-..|+++|.||.+.+||-+....+..++
T Consensus       262 ~hgtlvTaGsDGtf~FWDkdar~kLk~s~  290 (347)
T KOG0647|consen  262 VHGTLVTAGSDGTFSFWDKDARTKLKTSE  290 (347)
T ss_pred             ccceEEEecCCceEEEecchhhhhhhccC
Confidence            99999999999999999988776665543

>KOG1274|consensus

Probab=99.85  E-value=2e-19  Score=202.80  Aligned_cols=270  Identities=17%  Similarity=0.220  Sum_probs=205.6

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC-eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG-RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg-~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ..|....+.|+|.|+|.+|++++.||.|++|+.... +.-..+..+..                         .|.+++.
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~-------------------------~v~~ia~   64 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGE-------------------------LVSSIAC   64 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCc-------------------------eeEEEee
Confidence            468899999999999999999999999999997654 32233332332                         4555554


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                        .+.+|++|+.++.|.+|.+..++.-..+. ..-++.+++|+-+|++++.|+.|-.              |++.++...
T Consensus        65 --~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~--------------vK~~~~~D~  128 (933)
T KOG1274|consen   65 --YSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTA--------------VKLLNLDDS  128 (933)
T ss_pred             --cccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCcee--------------EEEEecccc
Confidence              35589999999999999998877553333 3568899999999999999998876              888888888


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      .....+++|.++|.+|.|+|.+.+||+.+.||.|+||+++.+....                         .|..+..  
T Consensus       129 s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~-------------------------tl~~v~k--  181 (933)
T KOG1274|consen  129 SQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK-------------------------TLTGVDK--  181 (933)
T ss_pred             chheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh-------------------------hcccCCc--
Confidence            8899999999999999999999999999999999999997654221                         0000000  


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                                                              +                       
T Consensus       182 --------------------------------------------------------~-----------------------  182 (933)
T KOG1274|consen  182 --------------------------------------------------------D-----------------------  182 (933)
T ss_pred             --------------------------------------------------------c-----------------------
Confidence                                                                    0                       


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccC--
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLS--  801 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~--  801 (894)
                                               .+.    .  ....+..++|+|++..|+..+.|+.|++|+...++.+..+...  
T Consensus       183 -------------------------n~~----~--~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~  231 (933)
T KOG1274|consen  183 -------------------------NEF----I--LSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLS  231 (933)
T ss_pred             -------------------------ccc----c--ccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeeccccc
Confidence                                     000    0  0123457899999999999999999999998888775544322  


Q ss_pred             ---CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEE
Q psy10063        802 ---CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA  861 (894)
Q Consensus       802 ---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~La  861 (894)
                         ...+.|+|.|+||+++..++    .|.|||+++.+.    ......|.+++|.|++..|-
T Consensus       232 ss~~~~~~wsPnG~YiAAs~~~g----~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it  286 (933)
T KOG1274|consen  232 SSKFSDLQWSPNGKYIAASTLDG----QILVWNVDTHER----HEFKRAVCCEAWKPNANAIT  286 (933)
T ss_pred             ccceEEEEEcCCCcEEeeeccCC----cEEEEecccchh----ccccceeEEEecCCCCCeeE
Confidence               34567999999999999988    599999997222    23346799999999876443

>KOG0294|consensus

Probab=99.85  E-value=9e-20  Score=182.78  Aligned_cols=216  Identities=12%  Similarity=0.241  Sum_probs=178.5

Q ss_pred             ccCCCccceeeeeccCccEEEecCCCeEEE-----------EEecCCCCEEEEEEccCCC--EEEEecCCCcEEEEecCC
Q psy10063        374 LSSPLSVDRLNSMSPAARKLATNAEPVVKM-----------QVTDQSAKITSLLWGNLDQ--YIITGHAKGDICTWDLRM  440 (894)
Q Consensus       374 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~-----------~l~~H~~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~t  440 (894)
                      +........+.++.-+|+++++++.+...+           .+..|.+.|++|.|.+.-.  .|++|+.||.|.||+...
T Consensus        37 F~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~  116 (362)
T KOG0294|consen   37 FAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGS  116 (362)
T ss_pred             ccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCC
Confidence            334444555667778899999887653222           5557999999999999765  999999999999999999


Q ss_pred             CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------------cceEEEEEecCCCEEEEEECCCCEEEE
Q psy10063        441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----------------EPINDMQFSKDATMFITASKDHTAKLF  503 (894)
Q Consensus       441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----------------~~V~~l~~spdg~~L~sgs~Dg~V~iw  503 (894)
                      .++++.+++|.+ .|..++++|.|++.++.+.|+.+                 ..-..|.|+|.|.+++.++.++ |-||
T Consensus       117 W~~~~slK~H~~-~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~-i~i~  194 (362)
T KOG0294|consen  117 WELLKSLKAHKG-QVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNK-IDIY  194 (362)
T ss_pred             eEEeeeeccccc-ccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccE-EEEE
Confidence            999999999999 79999999999998888888877                 2334578999999888887654 8899


Q ss_pred             EcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe-
Q psy10063        504 TTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH-  582 (894)
Q Consensus       504 dl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s-  582 (894)
                      .+....+...+....++.|+-|.. +..|++|+.++.              |++||...+.++..+.+|..+|.++.+- 
T Consensus       195 q~d~A~v~~~i~~~~r~l~~~~l~-~~~L~vG~d~~~--------------i~~~D~ds~~~~~~~~AH~~RVK~i~~~~  259 (362)
T KOG0294|consen  195 QLDNASVFREIENPKRILCATFLD-GSELLVGGDNEW--------------ISLKDTDSDTPLTEFLAHENRVKDIASYT  259 (362)
T ss_pred             ecccHhHhhhhhccccceeeeecC-CceEEEecCCce--------------EEEeccCCCccceeeecchhheeeeEEEe
Confidence            988888877777777777777764 567888887765              8999999999999999999999999853 


Q ss_pred             -cCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        583 -PDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       583 -pdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                       +++.+|++++.||.|+|||++...
T Consensus       260 ~~~~~~lvTaSSDG~I~vWd~~~~~  284 (362)
T KOG0294|consen  260 NPEHEYLVTASSDGFIKVWDIDMET  284 (362)
T ss_pred             cCCceEEEEeccCceEEEEEccccc
Confidence             568899999999999999998653

>KOG0267|consensus

Probab=99.85  E-value=2.7e-21  Score=212.02  Aligned_cols=163  Identities=21%  Similarity=0.354  Sum_probs=147.5

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +..|...|.|+..-..++.+++|+.|..+-||.+...-.+..|.+|..                         +|.||.|
T Consensus        24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hes-------------------------pIeSl~f   78 (825)
T KOG0267|consen   24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHES-------------------------PIESLTF   78 (825)
T ss_pred             hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCC-------------------------cceeeec
Confidence            346889999999977889999999999999999887777888999998                         7888999


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +.+..+|+.|+.+|.|++||++.++.++.+.+ ...+.++.|+|-|.+++.++.+..              +++||.+..
T Consensus        79 ~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd--------------~~iwD~Rk~  144 (825)
T KOG0267|consen   79 DTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTD--------------LKIWDIRKK  144 (825)
T ss_pred             CcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccccc--------------ceehhhhcc
Confidence            99999999999999999999999999988775 588999999999999988888875              899999988


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .+++.+.+|...|.++.|+|+|+++++|++|..++|||+..++
T Consensus       145 Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk  187 (825)
T KOG0267|consen  145 GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGK  187 (825)
T ss_pred             CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccc
Confidence            9999999999999999999999999999999999999986543

>KOG1963|consensus

Probab=99.84  E-value=4.3e-18  Score=192.10  Aligned_cols=472  Identities=15%  Similarity=0.158  Sum_probs=280.5

Q ss_pred             ceeeeeccCccEEEecCCCeEEE----------EEecCCCCEEEEEEccCCC---EEEEecCCCcEEEEecCCCeEEEEe
Q psy10063        381 DRLNSMSPAARKLATNAEPVVKM----------QVTDQSAKITSLLWGNLDQ---YIITGHAKGDICTWDLRMGRELESI  447 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~~~~~----------~l~~H~~~V~~l~~spdg~---~L~sgs~Dg~I~iWd~~tg~~~~~l  447 (894)
                      .+...||+|++++.......+++          .|.+|...+..+.+.|...   ++++++.||.|++||...+++++.+
T Consensus        19 ~~~avfSnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~   98 (792)
T KOG1963|consen   19 KSPAVFSNDAKFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTF   98 (792)
T ss_pred             ecccccccCCcEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEE
Confidence            34557999999998776655444          7789999999999988554   7789999999999999999999988


Q ss_pred             cCCCCCCeeEEEEcC---CCCEEE-EEeCCCCc-------------------------------cceEEEEEecCCCEEE
Q psy10063        448 SGHAKEPINDMQFSK---DATMFI-TASHSQAV-------------------------------EPINDMQFSKDATMFI  492 (894)
Q Consensus       448 ~~h~~~~V~~v~~sp---dg~~la-~~~~d~~i-------------------------------~~V~~l~~spdg~~L~  492 (894)
                      ..+.  +|..+.+.|   +-..++ .+..+..+                               ..-.+|.+.+.|.+.+
T Consensus        99 ~~~~--~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~  176 (792)
T KOG1963|consen   99 DNNL--PVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKG  176 (792)
T ss_pred             ecCC--ceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEE
Confidence            7654  344444422   111122 11111111                               1235677777777655


Q ss_pred             EEECCCCEEEEEcCCCcEEEEE------eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC-ccceeeEEEEeccccce
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTY------TTERPVNSAALSPILPHVVLGGGQEAREVTTTST-KVGKFDARFYHLIFEEE  565 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~------~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~-~~~~~~v~vwd~~~~~~  565 (894)
                      .+ .+..+.+|....+. ....      .|...+.|.++||.+++++++..+|.+.+|.--. +..           ...
T Consensus       177 i~-~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~-----------~~t  243 (792)
T KOG1963|consen  177 IV-HMCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDD-----------SET  243 (792)
T ss_pred             EE-EeeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccc-----------ccc
Confidence            55 45568888887755 2211      1334579999999999999999999976664332 111           123


Q ss_pred             EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc---cCCCceeeeEECcCCcEE--EecCCeEEEEeccc
Q psy10063        566 FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI---SEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHS  640 (894)
Q Consensus       566 ~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~---~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~  640 (894)
                      ...++.|...|.+++|+++|.+|++|+..|.+.+|.++++++.   +.+..+..+.++||+..+  ...+..++.+....
T Consensus       244 ~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~d  323 (792)
T KOG1963|consen  244 CTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASD  323 (792)
T ss_pred             ceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccc
Confidence            3456789999999999999999999999999999999987632   458889999999999776  45566666665522


Q ss_pred             CCCCCCCeeeeccc-----------cCCCceEEechhhHHHhhhcccccCCCCeEEeeccCC-ccee--E-----eccCc
Q psy10063        641 TSSTDTGGVFSGSR-----------VDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDE-QQSV--E-----LTKDE  701 (894)
Q Consensus       641 ~~~~d~~~i~sgs~-----------~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~--~-----~s~~~  701 (894)
                      ...   ...++|-.           +....+++-+.     .....+.++.+ .+.++.+-. ....  .     ...+.
T Consensus       324 l~~---k~tIsgi~~~~~~~k~~~~~l~t~~~idpr-----~~~~vln~~~g-~vQ~ydl~td~~i~~~~v~~~n~~~~~  394 (792)
T KOG1963|consen  324 LEI---KSTISGIKPPTPSTKTRPQSLTTGVSIDPR-----TNSLVLNGHPG-HVQFYDLYTDSTIYKLQVCDENYSDGD  394 (792)
T ss_pred             hhh---hhhccCccCCCccccccccccceeEEEcCC-----CCceeecCCCc-eEEEEeccccceeeeEEEEeecccCCc
Confidence            210   11111110           01111111110     00001111111 222222211 1000  0     01111


Q ss_pred             -ceeEEeeeEEEcCCCCEEEecccCcccccc---CCcceeeccccCc-ccccCCCCcceecCCCCceEEEeeCC-C-CCE
Q psy10063        702 -QIEMARNRMSINHSGTRLHVNPFDEQQSVD---ASPLMTWGHIEGT-PFKLDGSDTPILAGPVDIGFKMPEPP-K-REK  774 (894)
Q Consensus       702 -~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~---~~~l~~~~~~~g~-~~~~dg~~~~~~~~h~~~v~~la~sp-d-g~~  774 (894)
                       .+......+..+..|.+++...........   ...+++|-..... -|.+.   ..+...|...+...++.+ . ...
T Consensus       395 ~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~---T~I~~PH~~~~vat~~~~~~rs~~  471 (792)
T KOG1963|consen  395 VNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILN---TKINNPHGNAFVATIFLNPTRSVR  471 (792)
T ss_pred             ceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEE---EEEecCCCceeEEEEEecCcccce
Confidence             333334445555556666664433211111   2235666322211 11111   123456766655555443 3 338


Q ss_pred             EEEecCCCcEEEEEccCCceee---------c----cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC-cceeee
Q psy10063        775 LALALADKVSERYRDRKNKATA---------G----FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF-EEEFAR  840 (894)
Q Consensus       775 Latgs~Dg~I~iwd~~~~~~~~---------~----~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~  840 (894)
                      +++++.||.++||-....+.+.         .    +.......+|+.||..|+++.++     .|.|||..+ .++...
T Consensus       472 ~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~-----~Itiwd~~~~~~l~~~  546 (792)
T KOG1963|consen  472 CVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDD-----TITIWDYDTKNELLCT  546 (792)
T ss_pred             eEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCC-----EEEEecCCChhhhhcc
Confidence            9999999999999873322211         1    12445678899999988888877     499999988 444443


Q ss_pred             ccCCCCCeeEEEEeeCC--cEEEEecCCCcEEEEecCccccccccc
Q psy10063        841 IKGHFGPINSLAFHPDG--KSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       841 l~gH~~~V~~l~fSpdg--~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      +.....++..+.|....  ...+....-+.+.+|++-...+...++
T Consensus       547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll~~~l~w~~s  592 (792)
T KOG1963|consen  547 EGSRNWPIAELLFTAQTQNDGALVHATQQRLSVWNLLSMSLIWNLS  592 (792)
T ss_pred             ccccccchHhHhhhcccccccceeeccCceEehHhhhhhheecchh
Confidence            33333344444443211  123334456789999998888877443

>KOG0646|consensus

Probab=99.84  E-value=5.8e-20  Score=193.12  Aligned_cols=200  Identities=27%  Similarity=0.346  Sum_probs=172.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----------  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----------  476 (894)
                      -.+.|.||+-+|+|.+|+.|...|.|++|.+.+|+++..+.+|-. .|.|+.|+-||.+|++++.||.+           
T Consensus        80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ-~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a  158 (476)
T KOG0646|consen   80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQ-SITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA  158 (476)
T ss_pred             cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhcc-ceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc
Confidence            357899999999999999998999999999999999999999988 99999999999999999999988           


Q ss_pred             ----------------cceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC
Q psy10063        477 ----------------EPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       477 ----------------~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~  538 (894)
                                      .+|.++...+.  ..+|+++|.|.++++||+..|.++..+.....+.+++++|.++++++|+.+
T Consensus       159 ~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~  238 (476)
T KOG0646|consen  159 DNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEE  238 (476)
T ss_pred             ccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCc
Confidence                            36777777664  358999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEeccCcccee---eEEEEeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc
Q psy10063        539 EAREVTTTSTKVGKF---DARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~---~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                      |.+.+..+..-.++-   ..+.++.. +..+..+.||.+  .|.||+++-||..|++|+.||.|+|||+...+.++
T Consensus       239 G~I~~~~~~~~~~~~~~v~~k~~~~~-~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iR  313 (476)
T KOG0646|consen  239 GKIFQNLLFKLSGQSAGVNQKGRHEE-NTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIR  313 (476)
T ss_pred             ceEEeeehhcCCcccccccccccccc-cceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHH
Confidence            987765443322110   12333322 556777889998  99999999999999999999999999998887654

>KOG0301|consensus

Probab=99.84  E-value=2.6e-19  Score=196.01  Aligned_cols=176  Identities=18%  Similarity=0.234  Sum_probs=143.9

Q ss_pred             eeeeeccCccEEEecCCC--eEE-EEEecCCCCEEE-EEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCee
Q psy10063        382 RLNSMSPAARKLATNAEP--VVK-MQVTDQSAKITS-LLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIN  456 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~--~~~-~~l~~H~~~V~~-l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~  456 (894)
                      .++..+.||+.-+.....  .+. ..+.+|.+.|.+ ++|-+ |+.+|++|+.|..|.||.+.....+..|++|+.    
T Consensus        27 ~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~s----  102 (745)
T KOG0301|consen   27 CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKS----  102 (745)
T ss_pred             EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhcccc----
Confidence            344556666654444322  122 457789999988 88886 555799999999999999999999999999998    


Q ss_pred             EEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEE
Q psy10063        457 DMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLG  535 (894)
Q Consensus       457 ~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~  535 (894)
                                           .|+|++...++. |++||.|.+++||.+  +++...+. |...|+++++-|++ .+++|
T Consensus       103 ---------------------nVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTg  157 (745)
T KOG0301|consen  103 ---------------------NVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTG  157 (745)
T ss_pred             ---------------------ceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEec
Confidence                                 788888777777 999999999999965  55665566 46889999999988 88899


Q ss_pred             ECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        536 GGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       536 ~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      +.|..              ||+|.-  ++.++.|.||.+.|++|++-+++ .|++|+.||.|++|++.
T Consensus       158 saDKt--------------IklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~  208 (745)
T KOG0301|consen  158 SADKT--------------IKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLD  208 (745)
T ss_pred             cCcce--------------eeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEecc
Confidence            99997              777764  78889999999999999998765 58899999999999984

>KOG0267|consensus

Probab=99.84  E-value=4.3e-21  Score=210.43  Aligned_cols=191  Identities=26%  Similarity=0.362  Sum_probs=172.4

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      -.+.|.+|.+.|.||.|+.+..+|+.|+.+|+|+|||++.++.++.|.+|..                         .+.
T Consensus        62 ~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~-------------------------~~~  116 (825)
T KOG0267|consen   62 AITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLL-------------------------NIT  116 (825)
T ss_pred             hhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhcccc-------------------------Ccc
Confidence            3346899999999999999999999999999999999999999999999988                         788


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +|.|+|-+.++++|+.|+.+++||++...|.+.+.++ ..|.+++|+|+|++++.++.|..              +++||
T Consensus       117 sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~t--------------vki~d  182 (825)
T KOG0267|consen  117 SVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNT--------------VKIWD  182 (825)
T ss_pred             eeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcce--------------eeeec
Confidence            8889999999999999999999999998899988864 67889999999999999999776              99999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEecC
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~~~  630 (894)
                      +..|+.+..|.+|.+.|.++.|+|..-+|+.|+.|+.|++||+++.+.+.    ....+.+..|.++|+.+.+..
T Consensus       183 ~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~  257 (825)
T KOG0267|consen  183 LTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGE  257 (825)
T ss_pred             ccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCc
Confidence            99999999999999999999999998899999999999999999776553    244677899999998875443

>KOG1036|consensus

Probab=99.83  E-value=5.8e-19  Score=176.98  Aligned_cols=240  Identities=18%  Similarity=0.205  Sum_probs=186.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      .|.+|.|+|.+..|++++.||.+++||+....++..+.++.++.+++|.+ ...+++|+.|+.              |++
T Consensus        15 ~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~--------------vr~   79 (323)
T KOG1036|consen   15 GISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQ--------------VRR   79 (323)
T ss_pred             ceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCce--------------EEE
Confidence            68999999988899999999999999999999999999999999999997 568899999997              899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      +|+..+.... +..|...|.||.+.+....+++|+.|+.|++||.+......                            
T Consensus        80 ~Dln~~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~----------------------------  130 (323)
T KOG1036|consen   80 YDLNTGNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG----------------------------  130 (323)
T ss_pred             EEecCCccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc----------------------------
Confidence            9998776654 55799999999999888889999999999999986421000                            


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                     .                                                                
T Consensus       131 ---------------~----------------------------------------------------------------  131 (323)
T KOG1036|consen  131 ---------------T----------------------------------------------------------------  131 (323)
T ss_pred             ---------------c----------------------------------------------------------------
Confidence                           0                                                                


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee-
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA-  796 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~-  796 (894)
                                                            + .....|+++...  |..|++|+.|..|.+||++...... 
T Consensus       132 --------------------------------------~-d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q  170 (323)
T KOG1036|consen  132 --------------------------------------F-DQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQ  170 (323)
T ss_pred             --------------------------------------c-ccCceEEEEecc--CCEEEEeecCceEEEEEcccccchhh
Confidence                                                  0 001135555544  6799999999999999999877633 


Q ss_pred             ----ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc--ceeeeccCCC---------CCeeEEEEeeCCcEEE
Q psy10063        797 ----GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHF---------GPINSLAFHPDGKSYA  861 (894)
Q Consensus       797 ----~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg--~~l~~l~gH~---------~~V~~l~fSpdg~~La  861 (894)
                          .+.....++++-|.+...++++-++.  ..|..+|....  +.-..|+.|.         -+|.+|+|+|-...||
T Consensus       171 ~reS~lkyqtR~v~~~pn~eGy~~sSieGR--VavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfa  248 (323)
T KOG1036|consen  171 RRESSLKYQTRCVALVPNGEGYVVSSIEGR--VAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFA  248 (323)
T ss_pred             hccccceeEEEEEEEecCCCceEEEeecce--EEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEE
Confidence                33345567888888777777777762  23444444311  2233455664         3799999999999999


Q ss_pred             EecCCCcEEEEecCcccccccc
Q psy10063        862 SGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       862 S~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      +||.||.|.+||+..++.+..|
T Consensus       249 TgGsDG~V~~Wd~~~rKrl~q~  270 (323)
T KOG1036|consen  249 TGGSDGIVNIWDLFNRKRLKQL  270 (323)
T ss_pred             ecCCCceEEEccCcchhhhhhc
Confidence            9999999999999888776655

>KOG4328|consensus

Probab=99.83  E-value=5.8e-19  Score=184.98  Aligned_cols=290  Identities=16%  Similarity=0.137  Sum_probs=212.6

Q ss_pred             EEecCCCCEEEEEEccCC--CEEEEecCCCcEEEEecCCCe----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        404 QVTDQSAKITSLLWGNLD--QYIITGHAKGDICTWDLRMGR----ELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg--~~L~sgs~Dg~I~iWd~~tg~----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      ..+-|.++|.+++|+|..  ++||+|+.-|.|-+||+...+    .+..+..|..                         
T Consensus       181 v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~-------------------------  235 (498)
T KOG4328|consen  181 VAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSG-------------------------  235 (498)
T ss_pred             eeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCc-------------------------
Confidence            445588999999999965  588899999999999995222    2555666766                         


Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      +|.+|.|+| +-.+|++.|+||+|++-|++.+.....+..   ...+.++.|+.+...++.+..-|.             
T Consensus       236 ~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~-------------  302 (498)
T KOG4328|consen  236 PVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGN-------------  302 (498)
T ss_pred             cccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccc-------------
Confidence            677777777 556899999999999999987654443333   345778889988888888887774             


Q ss_pred             eEEEEeccccce-EEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        554 DARFYHLIFEEE-FARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       554 ~v~vwd~~~~~~-~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                       +.+||++.+.. ...+..|...|.+|++.|.. .+|++++.|++++|||++.-.....          |          
T Consensus       303 -f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s----------p----------  361 (498)
T KOG4328|consen  303 -FNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS----------P----------  361 (498)
T ss_pred             -eEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC----------c----------
Confidence             77888877654 55667788899999999965 4689999999999999964221000          0          


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                                                                                      
T Consensus       362 --------------------------------------------------------------------------------  361 (498)
T KOG4328|consen  362 --------------------------------------------------------------------------------  361 (498)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc-
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR-  790 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~-  790 (894)
                                                               .--...|...|.+..|||.+..|++-+.|..|||||.. 
T Consensus       362 -----------------------------------------~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~  400 (498)
T KOG4328|consen  362 -----------------------------------------FLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSC  400 (498)
T ss_pred             -----------------------------------------ceecccccceeeeeEEcCCCCceEeeccCCceEEeeccc
Confidence                                                     00012366778899999998889999999999999973 


Q ss_pred             ---CCceeeccccCC--------CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC-CeeE-EEEeeCC
Q psy10063        791 ---KNKATAGFLLSC--------PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG-PINS-LAFHPDG  857 (894)
Q Consensus       791 ---~~~~~~~~~~~~--------~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~-~V~~-l~fSpdg  857 (894)
                         ....+..+...+        -..+|.|+..+++++....    .|-|||-..++++..|..... .|.+ .+|+|-+
T Consensus       401 ~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r----~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~  476 (498)
T KOG4328|consen  401 ISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPR----PIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMR  476 (498)
T ss_pred             ccccCCccceeeccCcccccccchhheeCCCccEEEEeccCc----ceeEEcCCCCEEeeeccCccccccccceeecccc
Confidence               222222222211        1346899888888887766    599999999998887654433 4554 4799988


Q ss_pred             cEEEE-ecCCCcEEEEecCcc
Q psy10063        858 KSYAS-GGEDGFVRLHTFDQA  877 (894)
Q Consensus       858 ~~LaS-~s~Dg~V~vWdl~~~  877 (894)
                      ..|++ ++..|.|+||.-+.+
T Consensus       477 ~~~~aG~~s~Gki~vft~k~~  497 (498)
T KOG4328|consen  477 DTLAAGGNSSGKIYVFTNKKS  497 (498)
T ss_pred             cceeccCCccceEEEEecCCC
Confidence            84554 557788888875543

>KOG0639|consensus

Probab=99.83  E-value=2.1e-19  Score=189.14  Aligned_cols=263  Identities=17%  Similarity=0.150  Sum_probs=208.7

Q ss_pred             cceeeeeccCccEEEecCCCeEEEEEec---------------CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE
Q psy10063        380 VDRLNSMSPAARKLATNAEPVVKMQVTD---------------QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL  444 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~~~~~~l~~---------------H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~  444 (894)
                      ......+|..-+.+..++.+.++++-..               ....|+++.+.|||+-|++|++-.+|.|||+......
T Consensus       421 vVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTpr  500 (705)
T KOG0639|consen  421 VVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPR  500 (705)
T ss_pred             EEEEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcc
Confidence            3344567888888888887777663332               3356889999999999999999999999999865432


Q ss_pred             E--EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCee
Q psy10063        445 E--SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVN  521 (894)
Q Consensus       445 ~--~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~  521 (894)
                      .  ++....-                         ..+.++.+||.++.++|+.||.|.|||+....+++.|++ .+.+.
T Consensus       501 ikaeltssap-------------------------aCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGas  555 (705)
T KOG0639|consen  501 IKAELTSSAP-------------------------ACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS  555 (705)
T ss_pred             hhhhcCCcch-------------------------hhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCce
Confidence            2  2222111                         567888999999999999999999999999999999986 58999


Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      ||.+++||..|.+|+-|..              ||.||++.++.+... .....|.+|.++|.+.+|+.|-+.+.+.|..
T Consensus       556 cIdis~dGtklWTGGlDnt--------------vRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vevlh  620 (705)
T KOG0639|consen  556 CIDISKDGTKLWTGGLDNT--------------VRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLH  620 (705)
T ss_pred             eEEecCCCceeecCCCccc--------------eeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEEEe
Confidence            9999999999999999997              899999988776543 3456899999999999999999888877654


Q ss_pred             CCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCC
Q psy10063        602 LSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSG  681 (894)
Q Consensus       602 l~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g  681 (894)
                      ....+                                                                           
T Consensus       621 ~skp~---------------------------------------------------------------------------  625 (705)
T KOG0639|consen  621 TSKPE---------------------------------------------------------------------------  625 (705)
T ss_pred             cCCcc---------------------------------------------------------------------------
Confidence            43211                                                                           


Q ss_pred             CeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC
Q psy10063        682 TRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD  761 (894)
Q Consensus       682 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~  761 (894)
                                                                                             ...+..|+.
T Consensus       626 -----------------------------------------------------------------------kyqlhlheS  634 (705)
T KOG0639|consen  626 -----------------------------------------------------------------------KYQLHLHES  634 (705)
T ss_pred             -----------------------------------------------------------------------ceeeccccc
Confidence                                                                                   112345778


Q ss_pred             ceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCC--ceEeecCCCeEEEEecCCCCceeEEEeec
Q psy10063        762 IGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHL  832 (894)
Q Consensus       762 ~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~  832 (894)
                      .|.++.|++.|+++++.+.|..+-.|+..-+..+.+......  +.-+|.|.+++|++++++.    ..||.+
T Consensus       635 cVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkk----ATVYeV  703 (705)
T KOG0639|consen  635 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKK----ATVYEV  703 (705)
T ss_pred             EEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcc----eEEEEE
Confidence            899999999999999999999999999887777666554443  4458999999999999963    455543

>KOG0300|consensus

Probab=99.82  E-value=5.3e-19  Score=176.46  Aligned_cols=279  Identities=18%  Similarity=0.205  Sum_probs=207.6

Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEE
Q psy10063        423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKL  502 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~i  502 (894)
                      .|++.-.+++++      .++++.|.||++                         .|+.++.......+.+++.|.+.+|
T Consensus       126 rivssFk~~t~~------~~lvre~~GHkD-------------------------GiW~Vaa~~tqpi~gtASADhTA~i  174 (481)
T KOG0300|consen  126 RIVSSFKDGTVK------FRLVRELEGHKD-------------------------GIWHVAADSTQPICGTASADHTARI  174 (481)
T ss_pred             hheeeecCCcee------Eeehhhhccccc-------------------------ceeeehhhcCCcceeecccccceeE
Confidence            455555555533      245677889988                         5666665555567889999999999


Q ss_pred             EEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc------------cce-------eeEEEEec--
Q psy10063        503 FTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTK------------VGK-------FDARFYHL--  560 (894)
Q Consensus       503 wdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~------------~~~-------~~v~vwd~--  560 (894)
                      |.+++|+|+..+.+ .+.|.++.|++.+.+++.+++|+...+|.....            .++       ...+.-|-  
T Consensus       175 Ws~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~  254 (481)
T KOG0300|consen  175 WSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSE  254 (481)
T ss_pred             EeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccccccc
Confidence            99999999999886 489999999999999999999999989873210            000       00111110  


Q ss_pred             -----cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        561 -----IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       561 -----~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                           .-..++..|.+|.+.|.+..|-..|+.+++++.|....+||+++++.+                           
T Consensus       255 ~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v---------------------------  307 (481)
T KOG0300|consen  255 KSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVV---------------------------  307 (481)
T ss_pred             ccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCcee---------------------------
Confidence                 001346678999999999999999999999999999999999876421                           


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       308 --------------------------------------------------------------------------------  307 (481)
T KOG0300|consen  308 --------------------------------------------------------------------------------  307 (481)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                            .++.||......++-+|..+++++++.|-+.|+||.+..-..
T Consensus       308 --------------------------------------~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~s  349 (481)
T KOG0300|consen  308 --------------------------------------NILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQS  349 (481)
T ss_pred             --------------------------------------ccccCcchhccccccCCcceEEEEeccCceeEeccchhhcce
Confidence                                                  134456666667777888899999999999999998854443


Q ss_pred             e----ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc-eeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        796 A----GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       796 ~----~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~-~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      .    ++...+.+++|.-| ..+++++.|.    .|+|||++..+ .+..++ -..++..|+++-.+.+|+.--+...||
T Consensus       350 V~VFQGHtdtVTS~vF~~d-d~vVSgSDDr----TvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvR  423 (481)
T KOG0300|consen  350 VAVFQGHTDTVTSVVFNTD-DRVVSGSDDR----TVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVR  423 (481)
T ss_pred             eeeecccccceeEEEEecC-CceeecCCCc----eEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEE
Confidence            3    33334445556554 4577777777    69999998754 455554 356899999999899999999999999


Q ss_pred             EEecCcccccccc
Q psy10063        871 LHTFDQAYFDYTF  883 (894)
Q Consensus       871 vWdl~~~~~~~~~  883 (894)
                      |||+.+..+....
T Consensus       424 lfDlnG~RlaRlP  436 (481)
T KOG0300|consen  424 LFDLNGNRLARLP  436 (481)
T ss_pred             EEecCCCccccCC
Confidence            9999877665544

>KOG1538|consensus

Probab=99.82  E-value=4.3e-17  Score=176.81  Aligned_cols=419  Identities=14%  Similarity=0.148  Sum_probs=247.3

Q ss_pred             cceeeeeccCccEEEecCCC----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec-
Q psy10063        380 VDRLNSMSPAARKLATNAEP----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS-  448 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~-  448 (894)
                      ...-++|.|||..|+.+.+.          .+...|++|++.|.|++|+.||+++++|+.|..|.||.-.-   ...++ 
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---EG~LkY   90 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---EGILKY   90 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccc---cceeee
Confidence            55566889999877655443          33348899999999999999999999999999999998542   22232 


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCc---------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAV---------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT  513 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i---------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~  513 (894)
                      .|.+ .|.||.|.|-...|++++-...-               ..|.+++|..||++|+.|-.+|+|.|-+. .|+....
T Consensus        91 SH~D-~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~  168 (1081)
T KOG1538|consen   91 SHND-AIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVK  168 (1081)
T ss_pred             ccCC-eeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceE
Confidence            3666 99999999999998887743321               58899999999999999999999999853 4444444


Q ss_pred             EeC----CCCeeEEEEcCCCC-----EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecC
Q psy10063        514 YTT----ERPVNSAALSPILP-----HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  584 (894)
Q Consensus       514 ~~~----~~~v~~l~~spdg~-----~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd  584 (894)
                      ++.    ..+|++++|+|...     .+++......              +.+|.+. |+.+.+-+.-.-...|+++.++
T Consensus       169 I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qT--------------LSFy~Ls-G~~Igk~r~L~FdP~CisYf~N  233 (1081)
T KOG1538|consen  169 IERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQT--------------LSFYQLS-GKQIGKDRALNFDPCCISYFTN  233 (1081)
T ss_pred             EeCCCCCCCCceEEEecCCCCCCccceEEEEeccce--------------eEEEEec-ceeecccccCCCCchhheeccC
Confidence            442    36899999999642     2333332222              4444443 5555443334445679999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCc---cccCCCceeeeEECcCCcEE--EecCCeEEEEecccCCCC----------CC-Ce
Q psy10063        585 GKSYASGGEDGFLISNTLSNGL---DISEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSST----------DT-GG  648 (894)
Q Consensus       585 g~~l~sgs~Dg~I~vwdl~~~~---~~~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~~----------d~-~~  648 (894)
                      |.+++.|+.|+.+++|--+.-.   .-....++..++..|.++.+  ...+|.+..+........          +. .-
T Consensus       234 GEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fSTVH~ly~~RYA~R~sMtD  313 (1081)
T KOG1538|consen  234 GEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFSTVHGLYKDRYAYRDSMTD  313 (1081)
T ss_pred             CcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHhHhhhhhHHhhhhhhhhHH
Confidence            9999999999999999654322   11346789999999999876  677887766654221110          00 00


Q ss_pred             eeeccccCCCceEE--echh-hHHHhhhcccccCCCCeEEeecc-CCcceeEeccCcce--------e-EEeeeEEEcCC
Q psy10063        649 VFSGSRVDDSGVEL--TKDE-QIEMARNRMSINHSGTRLHVNPF-DEQQSVELTKDEQI--------E-MARNRMSINHS  715 (894)
Q Consensus       649 i~sgs~~~d~~i~l--~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~s~~~~~--------~-~~~~~~~~s~~  715 (894)
                      ++...-.....+++  .+.- +..+.+.++.+....+.+..... .....+.....+++        . .....+.+..+
T Consensus       314 VivQhLi~~qkvrIkC~DLVkKiaiYrnrLAVQLpeki~iYel~se~~~~mhY~v~ekI~kkf~cSLlVVc~~HiVlCqe  393 (1081)
T KOG1538|consen  314 VIVQHLITEQKVRIKCKDLVKKIAIYRNRLAVQLPEKILIYELYSEDLSDMHYRVKEKIIKKFECSLLVVCANHIVLCQE  393 (1081)
T ss_pred             HHHHHHhhcceeeeeHHHHHHHHHhhhhhheecccceEEEEeccccccccchhHHHHHHHhhccceEEEEEcCeEEEEcc
Confidence            00000001111222  1211 11222333333333322222111 11111111111110        0 00011111111


Q ss_pred             CCEEEecccCcccccc-----------------CCcceeeccccCccccc--CCCCcceecCCCCceEEEeeCCCCCEEE
Q psy10063        716 GTRLHVNPFDEQQSVD-----------------ASPLMTWGHIEGTPFKL--DGSDTPILAGPVDIGFKMPEPPKREKLA  776 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~-----------------~~~l~~~~~~~g~~~~~--dg~~~~~~~~h~~~v~~la~spdg~~La  776 (894)
                      . ++....+.+....+                 ...-.+.|..+|.+++.  +...-.++......|.|+.++...+.||
T Consensus       394 k-rLqClDF~Gvk~ReW~M~S~iRYikV~GGP~gREgL~vGlknGqV~kiF~dN~~PiLl~~~~tAvrClDINA~R~kLA  472 (1081)
T KOG1538|consen  394 K-RLQCLDFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQVLKIFVDNLFPILLLKQATAVRCLDINASRKKLA  472 (1081)
T ss_pred             c-ceeeecccchhhhhhhHHHHHHhhhhhcCCCCcceeEEEecCCcEEEEEecCCchhheecccceeEEeeccCCcceEE
Confidence            1 11111111111000                 01112334455554432  1111123345567899999999999999


Q ss_pred             EecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecC
Q psy10063        777 LALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTST  820 (894)
Q Consensus       777 tgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d  820 (894)
                      +....+...++|+.+++.+.+. .++.+++|.-.-.-+++..+.
T Consensus       473 vVDD~~~c~v~DI~t~elL~QE-pg~nSV~wNT~~E~MlcfT~~  515 (1081)
T KOG1538|consen  473 VVDDNDTCLVYDIDTKELLFQE-PGANSVAWNTQCEDMLCFTGG  515 (1081)
T ss_pred             EEccCCeEEEEEccCCceEeec-CCCceEEeeccccceEEEecC
Confidence            9999999999999998876653 456677777665555554444

>KOG0269|consensus

Probab=99.82  E-value=2.6e-19  Score=198.23  Aligned_cols=286  Identities=16%  Similarity=0.207  Sum_probs=211.0

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCe----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGR----ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      ....+|...++-..|+.++.. .++||.+....    +...++...             ..+.         .+..|+|.
T Consensus        40 ~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kq-------------n~~~---------S~~DVkW~   96 (839)
T KOG0269|consen   40 AKANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQ-------------NKFY---------SAADVKWG   96 (839)
T ss_pred             cccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeeccccc-------------ceee---------ehhhcccc
Confidence            445556666887788888754 78888765332    122221111             1111         34456666


Q ss_pred             c-CCCEEEEEECCCCEEEEEcCC---CcEEEEEe-CCCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        486 K-DATMFITASKDHTAKLFTTHD---RQLLKTYT-TERPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       486 p-dg~~L~sgs~Dg~V~iwdl~~---~~~~~~~~-~~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      . +.++||+++..|.|.+||+..   .+++..|. |...+.++.|++.... |++|+.|+.              |++||
T Consensus        97 ~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~--------------vK~~D  162 (839)
T KOG0269|consen   97 QLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGT--------------VKCWD  162 (839)
T ss_pred             cchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCce--------------EEEEe
Confidence            5 678999999999999999986   45555555 5688999999987764 556666775              99999


Q ss_pred             ccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                      ++..+-...+.+....|..|+|+| .+.+|+++.+.|.|++||++...+                               
T Consensus       163 lR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r-------------------------------  211 (839)
T KOG0269|consen  163 LRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR-------------------------------  211 (839)
T ss_pred             eecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh-------------------------------
Confidence            999999999999889999999998 467899999999999999964321                               


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                                                                                                      
T Consensus       212 --------------------------------------------------------------------------------  211 (839)
T KOG0269|consen  212 --------------------------------------------------------------------------------  211 (839)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-  797 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-  797 (894)
                                                       ....+..|.+.|+|+.|+|++.+||+|++|+.|+||+....+.... 
T Consensus       212 ---------------------------------~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~  258 (839)
T KOG0269|consen  212 ---------------------------------CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKH  258 (839)
T ss_pred             ---------------------------------HHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcccee
Confidence                                             0113456999999999999999999999999999999876554222 


Q ss_pred             ---cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc-ceeeeccCCCCCeeEEEEee-CCcEEEEecCCCcEEEE
Q psy10063        798 ---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFVRLH  872 (894)
Q Consensus       798 ---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~gH~~~V~~l~fSp-dg~~LaS~s~Dg~V~vW  872 (894)
                         -...+..+.|.|+-.+.+..+.- .++..|+|||+... -..+.+..|...|..++|-. |...|.+++.||.|..-
T Consensus       259 tInTiapv~rVkWRP~~~~hLAtcsm-v~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh  337 (839)
T KOG0269|consen  259 TINTIAPVGRVKWRPARSYHLATCSM-VVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQH  337 (839)
T ss_pred             EEeecceeeeeeeccCccchhhhhhc-cccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHh
Confidence               22456678899987765443332 23447999999754 34467889999999999975 55789999999998776


Q ss_pred             ecCcc
Q psy10063        873 TFDQA  877 (894)
Q Consensus       873 dl~~~  877 (894)
                      .++..
T Consensus       338 ~~kna  342 (839)
T KOG0269|consen  338 LFKNA  342 (839)
T ss_pred             hhhcc
Confidence            65544

>KOG2096|consensus

Probab=99.81  E-value=8e-18  Score=168.66  Aligned_cols=261  Identities=15%  Similarity=0.110  Sum_probs=158.7

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-----EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL-----LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-----~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .|.+|+|+.||++|++++.|+.|+||++++...     ++.--.-+....++|.||.+.+++....|..           
T Consensus        88 ~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~-----------  156 (420)
T KOG2096|consen   88 EVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNK-----------  156 (420)
T ss_pred             ceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCE-----------
Confidence            899999999999999999999999999987432     2211122467899999999988877766542           


Q ss_pred             eeEEEEeccc---cce---------EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC----CCceee
Q psy10063        553 FDARFYHLIF---EEE---------FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE----GSFTSS  616 (894)
Q Consensus       553 ~~v~vwd~~~---~~~---------~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~----~~~v~~  616 (894)
                        +++|.+..   |..         +..-+.|+-.|..+-....+.+|++++.|..|.+|+++ |+.+..    ...-..
T Consensus       157 --l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~  233 (420)
T KOG2096|consen  157 --LCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYD  233 (420)
T ss_pred             --EEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccc
Confidence              44443321   111         01113466677778887788999999999999999998 543321    111223


Q ss_pred             eEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063        617 STQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE  696 (894)
Q Consensus       617 ~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  696 (894)
                      .+.+|+|+.++                       +++  .-..+.+|.                                
T Consensus       234 aavSP~GRFia-----------------------~~g--FTpDVkVwE--------------------------------  256 (420)
T KOG2096|consen  234 AAVSPDGRFIA-----------------------VSG--FTPDVKVWE--------------------------------  256 (420)
T ss_pred             eeeCCCCcEEE-----------------------Eec--CCCCceEEE--------------------------------
Confidence            44445444432                       111  122233332                                


Q ss_pred             eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEE
Q psy10063        697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLA  776 (894)
Q Consensus       697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~La  776 (894)
                                   +.|..+|..-                             .-.....+.||...|..++|+++..+++
T Consensus       257 -------------~~f~kdG~fq-----------------------------ev~rvf~LkGH~saV~~~aFsn~S~r~v  294 (420)
T KOG2096|consen  257 -------------PIFTKDGTFQ-----------------------------EVKRVFSLKGHQSAVLAAAFSNSSTRAV  294 (420)
T ss_pred             -------------EEeccCcchh-----------------------------hhhhhheeccchhheeeeeeCCCcceeE
Confidence                         1111111100                             0012234678999999999999999999


Q ss_pred             EecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeC
Q psy10063        777 LALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       777 tgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd  856 (894)
                      +.+.||.+||||..-.....            .|.+.             ++.     |.  ..+..-.+.-..|++||.
T Consensus       295 tvSkDG~wriwdtdVrY~~~------------qDpk~-------------Lk~-----g~--~pl~aag~~p~RL~lsP~  342 (420)
T KOG2096|consen  295 TVSKDGKWRIWDTDVRYEAG------------QDPKI-------------LKE-----GS--APLHAAGSEPVRLELSPS  342 (420)
T ss_pred             EEecCCcEEEeeccceEecC------------CCchH-------------hhc-----CC--cchhhcCCCceEEEeCCC
Confidence            99999999999964211100            01110             111     10  111111222237899999


Q ss_pred             CcEEEEecCCCcEEEEecCccccccccc
Q psy10063        857 GKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       857 g~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      |+.||.+. ...|+++.-+.++....++
T Consensus       343 g~~lA~s~-gs~l~~~~se~g~~~~~~e  369 (420)
T KOG2096|consen  343 GDSLAVSF-GSDLKVFASEDGKDYPELE  369 (420)
T ss_pred             CcEEEeec-CCceEEEEcccCccchhHH
Confidence            99887654 3458888887776555543

>KOG2055|consensus

Probab=99.80  E-value=2.5e-18  Score=180.36  Aligned_cols=159  Identities=16%  Similarity=0.263  Sum_probs=135.5

Q ss_pred             CCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEE--EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        408 QSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELE--SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       408 H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~--~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      -..+|.+++|.|+|. .|++++....+++||+.+++..+  .+.++..                        ..+.....
T Consensus       256 ~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~------------------------~~~e~FeV  311 (514)
T KOG2055|consen  256 EKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEE------------------------KSMERFEV  311 (514)
T ss_pred             ccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCccc------------------------chhheeEe
Confidence            457899999999999 99999999999999999887533  3334432                        15677788


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      ++++.+|+..+..|.|.|....+++++..++..+.|..++|+.||+.|++.+++|.              |.+||++...
T Consensus       312 Shd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~Ge--------------V~v~nl~~~~  377 (514)
T KOG2055|consen  312 SHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGE--------------VYVWNLRQNS  377 (514)
T ss_pred             cCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCce--------------EEEEecCCcc
Confidence            89999999999999999999999999999999999999999999999999999996              8889999888


Q ss_pred             eEEEccCCCCCe--EEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        565 EFARIKGHFGPI--NSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       565 ~~~~l~~h~~~V--~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +++++.. .+.|  .+++.+.+|.|||+|+..|.|.|||....
T Consensus       378 ~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~  419 (514)
T KOG2055|consen  378 CLHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSC  419 (514)
T ss_pred             eEEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchh
Confidence            8888753 3333  45677789999999999999999997654

>KOG0269|consensus

Probab=99.80  E-value=2.7e-19  Score=198.05  Aligned_cols=195  Identities=19%  Similarity=0.316  Sum_probs=149.4

Q ss_pred             EEEEEEcc-CCCEEEEecCCCcEEEEecCC---CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-
Q psy10063        412 ITSLLWGN-LDQYIITGHAKGDICTWDLRM---GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-  486 (894)
Q Consensus       412 V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~t---g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-  486 (894)
                      +..|.|.. +..+||+++..|.|.+||+..   .+++..|..|..                         .|.++.|++ 
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~R-------------------------s~~~ldfh~t  144 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHER-------------------------SANKLDFHST  144 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhcc-------------------------ceeeeeeccC
Confidence            34466764 456999999999999999986   566778899998                         667777766 


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-c
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-E  564 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~  564 (894)
                      ...+|++|+.||.|++||++..+-...+.. ...|+.+.|+|.....+++..|+++             +++||++.. +
T Consensus       145 ep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~-------------lqlWDlRqp~r  211 (839)
T KOG0269|consen  145 EPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGY-------------LQLWDLRQPDR  211 (839)
T ss_pred             CccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCce-------------EEEeeccCchh
Confidence            567899999999999999999888888776 4789999999976655555555543             888888754 5


Q ss_pred             eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        565 EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       565 ~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      +..+|..|.++|.|+.|+|++.+||+||.|+.|+||++...+..     .....+..+.|.|+..               
T Consensus       212 ~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~---------------  276 (839)
T KOG0269|consen  212 CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARS---------------  276 (839)
T ss_pred             HHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCcc---------------
Confidence            66778899999999999999999999999999999999865422     2344455555555432               


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechh
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDE  666 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~  666 (894)
                             ..+.+++...+..|++|+..
T Consensus       277 -------~hLAtcsmv~dtsV~VWDvr  296 (839)
T KOG0269|consen  277 -------YHLATCSMVVDTSVHVWDVR  296 (839)
T ss_pred             -------chhhhhhccccceEEEEeec
Confidence                   33445555566777777633

>KOG4497|consensus

Probab=99.80  E-value=5.5e-18  Score=170.41  Aligned_cols=396  Identities=13%  Similarity=0.077  Sum_probs=225.7

Q ss_pred             eeeeccCccEEEecCCCeEEE----EEecCC-----CCEEEEEEccCCCEEEE-ecCCCcEEEEecCCCeEEEEecCCCC
Q psy10063        383 LNSMSPAARKLATNAEPVVKM----QVTDQS-----AKITSLLWGNLDQYIIT-GHAKGDICTWDLRMGRELESISGHAK  452 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~~~~~~----~l~~H~-----~~V~~l~~spdg~~L~s-gs~Dg~I~iWd~~tg~~~~~l~~h~~  452 (894)
                      ...|||+|+++++.....+.+    .|+-|.     +.|..+.|.-|.-++++ ...|+.|.+|++...+...++.....
T Consensus        13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~a   92 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQA   92 (447)
T ss_pred             ceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCC
Confidence            568999999999887764443    222232     77899999998876665 46788999999999998888887776


Q ss_pred             CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE-EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCE
Q psy10063        453 EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM-FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPH  531 (894)
Q Consensus       453 ~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~-L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~  531 (894)
                                               ++.+++|||||+. |.+...|-.|.||.+.+.+....-..+..+..++|.+||++
T Consensus        93 -------------------------gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f  147 (447)
T KOG4497|consen   93 -------------------------GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQF  147 (447)
T ss_pred             -------------------------cceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCce
Confidence                                     6777788888854 45566788999999998777665444667799999999999


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC--CCcEEEEECCCCcccc
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE--DGFLISNTLSNGLDIS  609 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~--Dg~I~vwdl~~~~~~~  609 (894)
                      .+..+..+....           +.+...+..+.++.++-..-....|.|+|||..|+.-..  +-.|..|..       
T Consensus       148 ~ai~sRrDCkdy-----------v~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~-------  209 (447)
T KOG4497|consen  148 CAILSRRDCKDY-----------VQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYER-------  209 (447)
T ss_pred             eeeeecccHHHH-----------HHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeee-------
Confidence            999887654221           222222223344445555556677778888777665432  222222222       


Q ss_pred             CCCceeeeEECcCCcEE--EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEee
Q psy10063        610 EGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVN  687 (894)
Q Consensus       610 ~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~  687 (894)
                       +-.+..+.|+|.++.+  .+.++.++.+....+... +..+..++ ..+..+.+...+.....    ..  .-.++...
T Consensus       210 -~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f-~eflhl~s-~~dp~~~~~~ke~~~~~----ql--~~~cLsf~  280 (447)
T KOG4497|consen  210 -GLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPF-GEFLHLCS-YHDPTLHLLEKETFSIV----QL--LHHCLSFT  280 (447)
T ss_pred             -ccceeEEEeccccceEEeeccchhhhhhceeeeeeh-hhhccchh-ccCchhhhhhhhhcchh----hh--cccccccC
Confidence             1224456677766655  333443433333322211 11111111 01111110000000000    00  00000000


Q ss_pred             ccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEe
Q psy10063        688 PFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMP  767 (894)
Q Consensus       688 ~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la  767 (894)
                      .  ...........+..                       -.+...++.+.          ..+...-...+.-.+-.++
T Consensus       281 p--~~~~a~~~~~se~~-----------------------YE~~~~pv~~~----------~lkp~tD~pnPk~g~g~la  325 (447)
T KOG4497|consen  281 P--TDLEAHIWEESETI-----------------------YEQQMTPVKVH----------KLKPPTDFPNPKCGAGKLA  325 (447)
T ss_pred             C--CccccCccccchhh-----------------------hhhhhcceeee----------cccCCCCCCCcccccceee
Confidence            0  00000000000000                       00000000000          0000001122344567899


Q ss_pred             eCCCCCEEEEecC--CCcEEEEEccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC
Q psy10063        768 EPPKREKLALALA--DKVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG  843 (894)
Q Consensus       768 ~spdg~~Latgs~--Dg~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g  843 (894)
                      |++|..|+++-..  -..+.+||++..+...-..  ..+....|.|..-+|+++.+..    .+++|......++..- +
T Consensus       326 fs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~s----rLY~W~psg~~~V~vP-~  400 (447)
T KOG4497|consen  326 FSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKS----RLYFWAPSGPRVVGVP-K  400 (447)
T ss_pred             ecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCc----eEEEEcCCCceEEecC-C
Confidence            9999999997533  3469999998877644333  3444566778777777776654    5999998865555443 3


Q ss_pred             CCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        844 HFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       844 H~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      ..-.|..|+|.-+|..|+-+|+|....
T Consensus       401 ~GF~i~~l~W~~~g~~i~l~~kDafc~  427 (447)
T KOG4497|consen  401 KGFNIQKLQWLQPGEFIVLCGKDAFCV  427 (447)
T ss_pred             CCceeeeEEecCCCcEEEEEcCCceEE
Confidence            336899999999999999999998543

>KOG0321|consensus

Probab=99.80  E-value=3.7e-18  Score=185.35  Aligned_cols=228  Identities=17%  Similarity=0.194  Sum_probs=166.1

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE--ecCCCCCCeeEEEEcCCC-CEEEEEeCCCCc----
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES--ISGHAKEPINDMQFSKDA-TMFITASHSQAV----  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~--l~~h~~~~V~~v~~spdg-~~la~~~~d~~i----  476 (894)
                      ....|...|..+.|.|-..+|++++.|.++++||+..++++..  +.||.+ .|.+++|.+.. ..|++|++|+.+    
T Consensus        95 ~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~-SvkS~cf~~~n~~vF~tGgRDg~illWD  173 (720)
T KOG0321|consen   95 KPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTG-SVKSECFMPTNPAVFCTGGRDGEILLWD  173 (720)
T ss_pred             ccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccccc-ccchhhhccCCCcceeeccCCCcEEEEE
Confidence            4456999999999999666999999999999999999998776  899998 99999999955 567889999877    


Q ss_pred             -----------------------------------------cceEE---EEEecCCCEEEEEEC-CCCEEEEEcCCCcEE
Q psy10063        477 -----------------------------------------EPIND---MQFSKDATMFITASK-DHTAKLFTTHDRQLL  511 (894)
Q Consensus       477 -----------------------------------------~~V~~---l~~spdg~~L~sgs~-Dg~V~iwdl~~~~~~  511 (894)
                                                               ..|.+   +.+..|...||+++. |+.|+||||+.....
T Consensus       174 ~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~  253 (720)
T KOG0321|consen  174 CRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTA  253 (720)
T ss_pred             EeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccc
Confidence                                                     12333   445567788998887 999999999975543


Q ss_pred             EEEe---------C---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc--eEEEccCCCCCe-
Q psy10063        512 KTYT---------T---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE--EFARIKGHFGPI-  576 (894)
Q Consensus       512 ~~~~---------~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~--~~~~l~~h~~~V-  576 (894)
                      ...+         +   ...+.++.....|.+|++.+.|+.              |.+|++....  .+..+.+|...- 
T Consensus       254 ~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s--------------Iy~ynm~s~s~sP~~~~sg~~~~sf  319 (720)
T KOG0321|consen  254 YRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS--------------IYFYNMRSLSISPVAEFSGKLNSSF  319 (720)
T ss_pred             cccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc--------------EEEEeccccCcCchhhccCccccee
Confidence            3221         1   235788888888999999999998              6667765432  333344443211 


Q ss_pred             -EEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeecccc
Q psy10063        577 -NSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRV  655 (894)
Q Consensus       577 -~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~  655 (894)
                       ..-..+||+.+|++|+.|...++|.+...+.-                 ....-||...+..+.+.+.....++.++  
T Consensus       320 ~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~-----------------~~~l~Ght~eVt~V~w~pS~~t~v~TcS--  380 (720)
T KOG0321|consen  320 YVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAP-----------------PALLLGHTREVTTVRWLPSATTPVATCS--  380 (720)
T ss_pred             eeeeecCCCCceEeccCCCcceeeeeecCccCC-----------------hhhhhCcceEEEEEeeccccCCCceeec--
Confidence             12246789999999999999999998765421                 1122344445555555545555666664  


Q ss_pred             CCCceEEech
Q psy10063        656 DDSGVELTKD  665 (894)
Q Consensus       656 ~d~~i~l~~~  665 (894)
                      +|..+++|..
T Consensus       381 dD~~~kiW~l  390 (720)
T KOG0321|consen  381 DDFRVKIWRL  390 (720)
T ss_pred             cCcceEEEec
Confidence            7888888875

>KOG1538|consensus

Probab=99.80  E-value=3.5e-18  Score=185.12  Aligned_cols=275  Identities=13%  Similarity=0.140  Sum_probs=210.7

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM  490 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~  490 (894)
                      .|..++|-|||..|+.+..+ .+.|||...|.+++.+++|++                         -|.|++|+.||++
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKD-------------------------tVycVAys~dGkr   67 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKD-------------------------TVYCVAYAKDGKR   67 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccc-------------------------eEEEEEEccCCce
Confidence            89999999999988887655 799999999999999999998                         7899999999999


Q ss_pred             EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc
Q psy10063        491 FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK  570 (894)
Q Consensus       491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~  570 (894)
                      +++|+.|+.|.||..+ .+-+..+.|.+.|.|+.|.|-...|++++-..               .-+|.......++  .
T Consensus        68 FASG~aDK~VI~W~~k-lEG~LkYSH~D~IQCMsFNP~~h~LasCsLsd---------------FglWS~~qK~V~K--~  129 (1081)
T KOG1538|consen   68 FASGSADKSVIIWTSK-LEGILKYSHNDAIQCMSFNPITHQLASCSLSD---------------FGLWSPEQKSVSK--H  129 (1081)
T ss_pred             eccCCCceeEEEeccc-ccceeeeccCCeeeEeecCchHHHhhhcchhh---------------ccccChhhhhHHh--h
Confidence            9999999999999754 23344567889999999999999999888665               5567655333221  1


Q ss_pred             CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeee
Q psy10063        571 GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVF  650 (894)
Q Consensus       571 ~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~  650 (894)
                      .....|.+++|.-||.+|+.|-.+|+|.|-+-...+.+                                          
T Consensus       130 kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~------------------------------------------  167 (1081)
T KOG1538|consen  130 KSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKV------------------------------------------  167 (1081)
T ss_pred             hhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcce------------------------------------------
Confidence            12357888999999999999999999988642211100                                          


Q ss_pred             eccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccc
Q psy10063        651 SGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  730 (894)
Q Consensus       651 sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~  730 (894)
                                ++                                                                    
T Consensus       168 ----------~I--------------------------------------------------------------------  169 (1081)
T KOG1538|consen  168 ----------KI--------------------------------------------------------------------  169 (1081)
T ss_pred             ----------EE--------------------------------------------------------------------
Confidence                      00                                                                    


Q ss_pred             cCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-----CCEEEEecCCCcEEEEEccCCceee--ccccCCC
Q psy10063        731 DASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-----REKLALALADKVSERYRDRKNKATA--GFLLSCP  803 (894)
Q Consensus       731 ~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-----g~~Latgs~Dg~I~iwd~~~~~~~~--~~~~~~~  803 (894)
                                             ..-.|....|++|+|+|.     ...+++..+..++.+|.+.....-+  .......
T Consensus       170 -----------------------~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~  226 (1081)
T KOG1538|consen  170 -----------------------ERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPC  226 (1081)
T ss_pred             -----------------------eCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCch
Confidence                                   001123455677777775     2567888888888888765443321  2223344


Q ss_pred             ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        804 DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       804 ~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      .+.+.+.|.++++++.++    .+++|-.+ |-.+..+.....+|+.|+..|.+++++.|..||+|..|++--.
T Consensus       227 CisYf~NGEy~LiGGsdk----~L~~fTR~-GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fS  295 (1081)
T KOG1538|consen  227 CISYFTNGEYILLGGSDK----QLSLFTRD-GVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFS  295 (1081)
T ss_pred             hheeccCCcEEEEccCCC----ceEEEeec-CeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHh
Confidence            667889999999999998    37888765 7778888778889999999999999999999999999987543

>KOG1188|consensus

Probab=99.80  E-value=5.5e-18  Score=171.90  Aligned_cols=149  Identities=17%  Similarity=0.274  Sum_probs=114.3

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec--CCCEEEEEECCCC
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK--DATMFITASKDHT  499 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp--dg~~L~sgs~Dg~  499 (894)
                      ..||++...|.|+|||..+|+.+..|+++..                         .+..++|..  ....|.+|+.||.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~-------------------------~~N~vrf~~~ds~h~v~s~ssDG~   95 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPA-------------------------TTNGVRFISCDSPHGVISCSSDGT   95 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCC-------------------------cccceEEecCCCCCeeEEeccCCe
Confidence            4678888889999999999999999999988                         444555544  4567999999999


Q ss_pred             EEEEEcCCCcEEEEEeC--C--CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce-EEEc-cCCC
Q psy10063        500 AKLFTTHDRQLLKTYTT--E--RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE-FARI-KGHF  573 (894)
Q Consensus       500 V~iwdl~~~~~~~~~~~--~--~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~-~~~l-~~h~  573 (894)
                      ||+||++.......+..  .  .+..|++..-.+..|++|...-....          .|.+||++..+. ++.+ ..|.
T Consensus        96 Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A----------~v~lwDvR~~qq~l~~~~eSH~  165 (376)
T KOG1188|consen   96 VRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDA----------SVVLWDVRSEQQLLRQLNESHN  165 (376)
T ss_pred             EEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCce----------EEEEEEeccccchhhhhhhhcc
Confidence            99999998776655542  2  35566666656677777644322111          288999998776 5544 5699


Q ss_pred             CCeEEEEEecC-CCEEEEEeCCCcEEEEECCCC
Q psy10063        574 GPINSLAFHPD-GKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       574 ~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ..|++|.|+|. -.+|++|+.||.|.|||+...
T Consensus       166 DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d  198 (376)
T KOG1188|consen  166 DDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD  198 (376)
T ss_pred             CcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence            99999999995 568999999999999998653

>KOG0264|consensus

Probab=99.79  E-value=5.3e-18  Score=178.43  Aligned_cols=219  Identities=17%  Similarity=0.294  Sum_probs=168.7

Q ss_pred             EEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCe-------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        403 MQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGR-------ELESISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~-------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      +.|.||.+.=.+|+|++... +|++|+.|+.|++||+....       ....+.+|..                      
T Consensus       171 l~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~----------------------  228 (422)
T KOG0264|consen  171 LRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHED----------------------  228 (422)
T ss_pred             eEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCc----------------------
Confidence            47889999888999999554 89999999999999996432       2456677777                      


Q ss_pred             CccceEEEEEec-CCCEEEEEECCCCEEEEEcCC--CcEEEEEe-CCCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCc
Q psy10063        475 AVEPINDMQFSK-DATMFITASKDHTAKLFTTHD--RQLLKTYT-TERPVNSAALSPILPH-VVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       475 ~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~--~~~~~~~~-~~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~  549 (894)
                         .|..++|++ +..+|++++.|+.+.|||++.  .++.+..+ |.++|.|++|.|-+.. ||+|+.|+.         
T Consensus       229 ---~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t---------  296 (422)
T KOG0264|consen  229 ---VVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT---------  296 (422)
T ss_pred             ---ceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCc---------
Confidence               677777777 567899999999999999994  44444444 5789999999997665 556666776         


Q ss_pred             cceeeEEEEecccc-ceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        550 VGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       550 ~~~~~v~vwd~~~~-~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                           |++||++.- +++..+.+|...|.+|.|+|.. ..|++++.|+.+.|||+..-...+   ......-.|. .++.
T Consensus       297 -----V~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq---~~eda~dgpp-EllF  367 (422)
T KOG0264|consen  297 -----VALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQ---SPEDAEDGPP-ELLF  367 (422)
T ss_pred             -----EEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccccccc---ChhhhccCCc-ceeE
Confidence                 889998764 4678899999999999999964 578899999999999997543221   1111222333 3456


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechh
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDE  666 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~  666 (894)
                      .++||...+..+.+.+...-.+.+.+  .|..+.+|...
T Consensus       368 ~HgGH~~kV~DfsWnp~ePW~I~Sva--eDN~LqIW~~s  404 (422)
T KOG0264|consen  368 IHGGHTAKVSDFSWNPNEPWTIASVA--EDNILQIWQMA  404 (422)
T ss_pred             EecCcccccccccCCCCCCeEEEEec--CCceEEEeecc
Confidence            78899999988888877777777777  78899999854

>KOG0268|consensus

Probab=99.79  E-value=1.1e-18  Score=177.74  Aligned_cols=202  Identities=15%  Similarity=0.233  Sum_probs=161.4

Q ss_pred             eeccCccEEEecCC-CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCC
Q psy10063        385 SMSPAARKLATNAE-PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKD  463 (894)
Q Consensus       385 ~~s~dg~~l~~~~~-~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spd  463 (894)
                      .-+.||...+.... ......++.|.+.|..|++..  ..++++++|.+|++|.++ |..++.+.+..  .+..|.-+..
T Consensus        84 SGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~-~~p~~tilg~s--~~~gIdh~~~  158 (433)
T KOG0268|consen   84 SGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKID-GPPLHTILGKS--VYLGIDHHRK  158 (433)
T ss_pred             ccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeecc-CCcceeeeccc--cccccccccc
Confidence            44566666555433 344558899999999999987  678888899999999987 45777776654  5777777777


Q ss_pred             CCEEEEEeCCCCc----------------cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEc
Q psy10063        464 ATMFITASHSQAV----------------EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALS  526 (894)
Q Consensus       464 g~~la~~~~d~~i----------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~s  526 (894)
                      +..++++|.+-.|                ..|.++.|+| .-..|++|+.|+.|.|||++.+.+++.+.....-..|+|+
T Consensus       159 ~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~Iswn  238 (433)
T KOG0268|consen  159 NSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWN  238 (433)
T ss_pred             cccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecC
Confidence            7777887765544                4678888988 4557888889999999999999999999888888999999


Q ss_pred             CCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        527 PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       527 pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      |.+-.++++..|..              +..||++.. ..+....+|-..|.+++|+|-|+-|++||.|.+|+||.+..+
T Consensus       239 PeafnF~~a~ED~n--------------lY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~  304 (433)
T KOG0268|consen  239 PEAFNFVAANEDHN--------------LYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHG  304 (433)
T ss_pred             ccccceeecccccc--------------ceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCC
Confidence            96666666666665              777777643 456677899999999999999999999999999999988654

>KOG1332|consensus

Probab=99.79  E-value=5.2e-18  Score=164.48  Aligned_cols=187  Identities=18%  Similarity=0.267  Sum_probs=141.6

Q ss_pred             CccceeeeeccCccEEEecCC--C--eEEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCeE--EEEecC
Q psy10063        378 LSVDRLNSMSPAARKLATNAE--P--VVKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGRE--LESISG  449 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~--~--~~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~  449 (894)
                      ....|+...+.|+..-+...+  .  .+...|.||.++|..++|..  .|.+||++++||.|.||.-+.|+.  ...+..
T Consensus        21 yygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~  100 (299)
T KOG1332|consen   21 YYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAA  100 (299)
T ss_pred             hhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhh
Confidence            344566666666655443322  2  56679999999999999986  899999999999999999887754  445556


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec--CCCEEEEEECCCCEEEEEcCCC-c-EEEE--EeCCCCeeEE
Q psy10063        450 HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK--DATMFITASKDHTAKLFTTHDR-Q-LLKT--YTTERPVNSA  523 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~-~-~~~~--~~~~~~v~~l  523 (894)
                      |..                         .|.+|+|.|  -|-.|++++.||.|.|.+++.. . ....  +-|.-.|.++
T Consensus       101 h~~-------------------------SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsV  155 (299)
T KOG1332|consen  101 HSA-------------------------SVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSV  155 (299)
T ss_pred             hcc-------------------------cceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccccccee
Confidence            776                         566666665  4668999999999999998754 2 2222  2356789999


Q ss_pred             EEcCC---C-----------CEEEEEECCCCeEEEeccCccceeeEEEEecccc--ceEEEccCCCCCeEEEEEecCC--
Q psy10063        524 ALSPI---L-----------PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHFGPINSLAFHPDG--  585 (894)
Q Consensus       524 ~~spd---g-----------~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~spdg--  585 (894)
                      +|.|.   |           ++|++|+.|..              |+||+...+  ++.+.|.+|.+.|+.++|.|.-  
T Consensus       156 swapa~~~g~~~~~~~~~~~krlvSgGcDn~--------------VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl  221 (299)
T KOG1332|consen  156 SWAPASAPGSLVDQGPAAKVKRLVSGGCDNL--------------VKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGL  221 (299)
T ss_pred             eecCcCCCccccccCcccccceeeccCCccc--------------eeeeecCCcchhhhhhhhhcchhhhhhhhccccCC
Confidence            99986   5           67888888887              666666554  3344589999999999999963  


Q ss_pred             --CEEEEEeCCCcEEEEECC
Q psy10063        586 --KSYASGGEDGFLISNTLS  603 (894)
Q Consensus       586 --~~l~sgs~Dg~I~vwdl~  603 (894)
                        .+|+++++||.|.||..+
T Consensus       222 ~~s~iAS~SqDg~viIwt~~  241 (299)
T KOG1332|consen  222 PKSTIASCSQDGTVIIWTKD  241 (299)
T ss_pred             CceeeEEecCCCcEEEEEec
Confidence              479999999999999764

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.79  E-value=2.1e-15  Score=170.26  Aligned_cols=352  Identities=24%  Similarity=0.353  Sum_probs=242.0

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe-EEEEecCCCCCCeeEEEE-cCCCC-EEEEEeC-CCCc---
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR-ELESISGHAKEPINDMQF-SKDAT-MFITASH-SQAV---  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~-~~~~l~~h~~~~V~~v~~-spdg~-~la~~~~-d~~i---  476 (894)
                      .+.+|...|.++.|.+.+..++.++.|+.|.+|+...+. .+..+.++....+..+.+ .+++. +++..+. ++.+   
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  139 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW  139 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence            567899999999999999999999999999999999886 667776633225677777 77777 4443333 4333   


Q ss_pred             ----------------cceEEEEEecCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEE-EC
Q psy10063        477 ----------------EPINDMQFSKDATMFITASK-DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLG-GG  537 (894)
Q Consensus       477 ----------------~~V~~l~~spdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~-~~  537 (894)
                                      ..|.+++|+++++++++++. |+.+++|++..++.+..+.. ...|.+++|+|++..++.+ +.
T Consensus       140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  219 (466)
T COG2319         140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSS  219 (466)
T ss_pred             EecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecC
Confidence                            57789999999999998885 99999999999888888875 6889999999999844444 66


Q ss_pred             CCCeEEEeccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceee
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSS  616 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~  616 (894)
                      ++.              |++||...+..+. .+.+|...+ ...|++++.++++++.|+.+++|++......     +..
T Consensus       220 d~~--------------i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~  279 (466)
T COG2319         220 DGT--------------IRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSL-----LRT  279 (466)
T ss_pred             CCc--------------EEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcE-----EEE
Confidence            665              6788888777777 688888876 4489999988999999999999999765420     000


Q ss_pred             eEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063        617 STQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE  696 (894)
Q Consensus       617 ~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  696 (894)
                      .         ..+...+..+.   +. +++..+++++  .+..+.+|+...                             
T Consensus       280 ~---------~~~~~~v~~~~---~~-~~~~~~~~~~--~d~~~~~~~~~~-----------------------------  315 (466)
T COG2319         280 L---------SGHSSSVLSVA---FS-PDGKLLASGS--SDGTVRLWDLET-----------------------------  315 (466)
T ss_pred             E---------ecCCccEEEEE---EC-CCCCEEEEee--CCCcEEEEEcCC-----------------------------
Confidence            0         00011111111   11 1222333322  112244432110                             


Q ss_pred             eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEE
Q psy10063        697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLA  776 (894)
Q Consensus       697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~La  776 (894)
                                                                    ........     ...|...+..+.+.+++..++
T Consensus       316 ----------------------------------------------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  344 (466)
T COG2319         316 ----------------------------------------------GKLLSSLT-----LKGHEGPVSSLSFSPDGSLLV  344 (466)
T ss_pred             ----------------------------------------------CceEEEee-----ecccCCceEEEEECCCCCEEE
Confidence                                                          00000000     123444567777733335565


Q ss_pred             Ee-cCCCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEE--ecCCCCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063        777 LA-LADKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTT--TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL  851 (894)
Q Consensus       777 tg-s~Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~a--s~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l  851 (894)
                      .+ ..|+.+++|+.............  ...+.+++ . ....+  ..+.    .+++|+.........+..+...+..+
T Consensus       345 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (466)
T COG2319         345 SGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSP-D-GRVVSSGSTDG----TVRLWDLSTGSLLRNLDGHTSRVTSL  418 (466)
T ss_pred             EeecCCCcEEeeecCCCceeEEecCCceEEEEEECC-C-CCEEEEecCCC----ceEEEecccCeeeeeccCCCCcEEEE
Confidence            55 68889999998877733332222  44566777 5 43333  3333    59999999888877776655789999


Q ss_pred             EEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        852 AFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       852 ~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      .+++++.++++++.++.+++|++..
T Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         419 DFSPDGKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             EECCCCcEEEEecCCCcEEEEeccC
Confidence            9999999999999999999999988

>KOG2919|consensus

Probab=99.79  E-value=2.3e-17  Score=165.81  Aligned_cols=289  Identities=15%  Similarity=0.166  Sum_probs=197.8

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC-CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe--
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA-KEPINDMQFSKDATMFITASHSQAVEPINDMQFS--  485 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~-~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s--  485 (894)
                      ......+.|||||..|++-+.|..+.+|++...-..+.-.+.. ...+..+.+- .|.            -|+..+|-  
T Consensus        49 ~nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~-eg~------------tvydy~wYs~  115 (406)
T KOG2919|consen   49 LNFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQ-EGE------------TVYDYCWYSR  115 (406)
T ss_pred             hhhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEec-cCC------------EEEEEEeeec
Confidence            3456788999999999999999999999985321100000000 0001111111 011            34444443  


Q ss_pred             -----cCCCEEEEEECCCCEEEEEcCCCcEEEEEeC---C---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        486 -----KDATMFITASKDHTAKLFTTHDRQLLKTYTT---E---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       486 -----pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                           |+..++++.+.|.-|+|||.-+|++...+..   .   ....+|+|+|||.+|++|...-               
T Consensus       116 M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrc---------------  180 (406)
T KOG2919|consen  116 MKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRC---------------  180 (406)
T ss_pred             cccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccce---------------
Confidence                 6778999999999999999999999877763   2   3468999999999999876544               


Q ss_pred             EEEEec-cccceEE--Ec-----cCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063        555 ARFYHL-IFEEEFA--RI-----KGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       555 v~vwd~-~~~~~~~--~l-----~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~  625 (894)
                      |+++|+ +.|+...  ..     .+..+-|.|++|+|- .+.++.|+....+-||.-...                    
T Consensus       181 irvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~--------------------  240 (406)
T KOG2919|consen  181 IRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR--------------------  240 (406)
T ss_pred             EEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCC--------------------
Confidence            777877 4443211  11     233667888899984 447777776666555543211                    


Q ss_pred             EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063        626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM  705 (894)
Q Consensus       626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~  705 (894)
                                                                                                      
T Consensus       241 --------------------------------------------------------------------------------  240 (406)
T KOG2919|consen  241 --------------------------------------------------------------------------------  240 (406)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CCcE
Q psy10063        706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DKVS  784 (894)
Q Consensus       706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg~I  784 (894)
                                                                   +.+.++.+|.+.|..++|.++|..|.+|.+ |..|
T Consensus       241 ---------------------------------------------~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkI  275 (406)
T KOG2919|consen  241 ---------------------------------------------RPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKI  275 (406)
T ss_pred             ---------------------------------------------CceeeecccCCCeeeEEeccCcCeecccccCCCeE
Confidence                                                         112245578899999999999999999876 6679


Q ss_pred             EEEEccCCcee----ecccc-CCCceEe--ecCCCeEEEEecCCCCceeEEEeecCC-cceeeeccCCCCCeeEEEEeeC
Q psy10063        785 ERYRDRKNKAT----AGFLL-SCPDFLF--DFDTTREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       785 ~iwd~~~~~~~----~~~~~-~~~~~~f--S~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~l~gH~~~V~~l~fSpd  856 (894)
                      ..||++..+..    .++.. .-.++.|  .++|++|+++..++    .|++||++. |..+..+..|+..|..|++.|-
T Consensus       276 l~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG----~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~  351 (406)
T KOG2919|consen  276 LCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDG----SVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPI  351 (406)
T ss_pred             EEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCc----cEEEEecCCCCCcccccccccccccceecCcc
Confidence            99999876652    22222 2234555  55677777776666    599999998 7878889999999999999999


Q ss_pred             CcEEEEecCCCcEEEEecCcc
Q psy10063        857 GKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       857 g~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      -.+||+++..   |+|...+.
T Consensus       352 mpilatssGq---r~f~~~~d  369 (406)
T KOG2919|consen  352 MPILATSSGQ---RIFKYPKD  369 (406)
T ss_pred             cceeeeccCc---eeecCCCc
Confidence            9999988754   45555433

>KOG0322|consensus

Probab=99.78  E-value=6.4e-18  Score=165.58  Aligned_cols=293  Identities=17%  Similarity=0.132  Sum_probs=196.6

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      +.|++|.+.|.++.|-.+++ |++|..-|.|++|++.+.+.+..++++...                        .|..+
T Consensus         8 fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~------------------------~it~l   62 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRL------------------------FITNL   62 (323)
T ss_pred             eEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccc------------------------eeece
Confidence            45679999999999988775 999999999999999999888888854431                        56677


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcC-----CCCE---EEEEECCCCeEEEeccCccceee
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSP-----ILPH---VVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~sp-----dg~~---l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      ..-|+ ..|.+-+.|+.+.+|++.-+..+....  -.+.++-|++     .++.   ++..-..+.            ..
T Consensus        63 q~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~S--i~~nslgFCrfSl~~~~k~~eqll~yp~rgs------------de  127 (323)
T KOG0322|consen   63 QSIPN-DSLDTQGRDPLLILWTIAYSAFISIHS--IVVNSLGFCRFSLVKKPKNSEQLLEYPSRGS------------DE  127 (323)
T ss_pred             eecCC-cchhhcCCCceEEEEEccCcceEEEee--eeccccccccceeccCCCcchhheecCCccc------------ch
Confidence            77776 557888899999999998765544322  2233344433     2211   111111111            01


Q ss_pred             EEEEeccccceEEEc----cCCCCCeEEEEEec-CCC--EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        555 ARFYHLIFEEEFARI----KGHFGPINSLAFHP-DGK--SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       555 v~vwd~~~~~~~~~l----~~h~~~V~~l~~sp-dg~--~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                      +.+-|......++..    .+..+.|.|..|.. ++.  +|++|-++|.|.+||+..+..+-.                 
T Consensus       128 ~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~-----------------  190 (323)
T KOG0322|consen  128 THKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQ-----------------  190 (323)
T ss_pred             hhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeec-----------------
Confidence            222222222222211    23456777777644 333  466777899999999976532100                 


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                              +..                       .|                                            
T Consensus       191 --------~~~-----------------------~~--------------------------------------------  195 (323)
T KOG0322|consen  191 --------LPQ-----------------------SS--------------------------------------------  195 (323)
T ss_pred             --------ccc-----------------------cc--------------------------------------------
Confidence                    000                       00                                            


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                                                                 +.......|...|.++.|.+....=++|+.+..+..|
T Consensus       196 -------------------------------------------kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~  232 (323)
T KOG0322|consen  196 -------------------------------------------KVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMY  232 (323)
T ss_pred             -------------------------------------------ccccchhhccCcceeeeechhhcCCcCCCccccceee
Confidence                                                       0000123466667777776655555677777777788


Q ss_pred             EccCCc--e-----eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEE
Q psy10063        788 RDRKNK--A-----TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY  860 (894)
Q Consensus       788 d~~~~~--~-----~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~L  860 (894)
                      .+....  +     +.-...++..+.+.+|++.+++++.|+    .||||..+++..++.|+-|++.|.+|+|+||..+|
T Consensus       233 Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~----RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lm  308 (323)
T KOG0322|consen  233 SLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDH----RIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELM  308 (323)
T ss_pred             eeccccCcccccceEEecCCCccceEEccCCcEEeecccCC----cEEEEEeccCCchhhhhhhhcceeEEEeCCCCchh
Confidence            765431  1     122234566788999999999999998    69999999999999999999999999999999999


Q ss_pred             EEecCCCcEEEEec
Q psy10063        861 ASGGEDGFVRLHTF  874 (894)
Q Consensus       861 aS~s~Dg~V~vWdl  874 (894)
                      |.+|.|+.|.+|++
T Consensus       309 AaaskD~rISLWkL  322 (323)
T KOG0322|consen  309 AAASKDARISLWKL  322 (323)
T ss_pred             hhccCCceEEeeec
Confidence            99999999999986

>KOG1034|consensus

Probab=99.78  E-value=9.8e-18  Score=169.03  Aligned_cols=309  Identities=15%  Similarity=0.082  Sum_probs=202.1

Q ss_pred             EEecCCCCEEEEEEcc-----CCCEEEEecCCCcEEEEecCCCe---EEEEecC--CCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        404 QVTDQSAKITSLLWGN-----LDQYIITGHAKGDICTWDLRMGR---ELESISG--HAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-----dg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~--h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      ...+|...|..++|.+     +-+.+++++.+ .|.||......   .++.+..  |..                     
T Consensus        33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~E---------------------   90 (385)
T KOG1034|consen   33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDE---------------------   90 (385)
T ss_pred             hhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCc---------------------
Confidence            4567999999999985     22356666554 68888765332   2333221  222                     


Q ss_pred             CCccceEEEEEecC----CCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCC-EEEEEECCCCeEEEecc
Q psy10063        474 QAVEPINDMQFSKD----ATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILP-HVVLGGGQEAREVTTTS  547 (894)
Q Consensus       474 ~~i~~V~~l~~spd----g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~  547 (894)
                          ...-++|+-|    .-+||.++.-|.|+|.|+.++++...+.+ +..|..|.|.|+.. +|++++.|..       
T Consensus        91 ----sfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~s-------  159 (385)
T KOG1034|consen   91 ----SFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHS-------  159 (385)
T ss_pred             ----ceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCce-------
Confidence                3444455442    34788889999999999999999988774 68899999999875 5566666665       


Q ss_pred             CccceeeEEEEeccccceEEEc---cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCc
Q psy10063        548 TKVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGL  624 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~  624 (894)
                             ||+|++++..++..|   .||.+.|.++.|+.+|.+|++++.|..|++|++...+-....  -.+..|+|++.
T Consensus       160 -------vRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~l--E~s~~~~~~~t  230 (385)
T KOG1034|consen  160 -------VRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKL--ELSITYSPNKT  230 (385)
T ss_pred             -------EEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhh--hhhcccCCCCc
Confidence                   999999999999887   569999999999999999999999999999999754311100  00011122111


Q ss_pred             EEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCccee
Q psy10063        625 VYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIE  704 (894)
Q Consensus       625 ~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~  704 (894)
                      ...                                   .+                                  ..    
T Consensus       231 ~~p-----------------------------------fp----------------------------------t~----  237 (385)
T KOG1034|consen  231 TRP-----------------------------------FP----------------------------------TP----  237 (385)
T ss_pred             cCc-----------------------------------CC----------------------------------cc----
Confidence            000                                   00                                  00    


Q ss_pred             EEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcE
Q psy10063        705 MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVS  784 (894)
Q Consensus       705 ~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I  784 (894)
                                                   ...+          ++   .....-|...|-|+.|-  |.++++-+.++.|
T Consensus       238 -----------------------------~~~f----------p~---fst~diHrnyVDCvrw~--gd~ilSkscenaI  273 (385)
T KOG1034|consen  238 -----------------------------KTHF----------PD---FSTTDIHRNYVDCVRWF--GDFILSKSCENAI  273 (385)
T ss_pred             -----------------------------cccc----------cc---ccccccccchHHHHHHH--hhheeecccCceE
Confidence                                         0000          00   00123466777777776  5788888888889


Q ss_pred             EEEEccCCce-ee-------------cccc---CCCceEeec--CCCeEEEEecCCCCceeEEEeecCCccee--eeccC
Q psy10063        785 ERYRDRKNKA-TA-------------GFLL---SCPDFLFDF--DTTREVTTTSTKVGKFDARFYHLIFEEEF--ARIKG  843 (894)
Q Consensus       785 ~iwd~~~~~~-~~-------------~~~~---~~~~~~fS~--dg~~l~~as~d~~g~~~I~vwd~~tg~~l--~~l~g  843 (894)
                      ..|...+.+. +.             ++..   .+.-+.|+.  .++.||++...+    .|++||++..+..  ..+..
T Consensus       274 ~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g----~v~vwdL~~~ep~~~ttl~~  349 (385)
T KOG1034|consen  274 VCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSG----KVYVWDLDNNEPPKCTTLTH  349 (385)
T ss_pred             EEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCC----cEEEEECCCCCCccCceEEe
Confidence            9997632221 11             1111   111233444  456677666655    5999999877653  12221


Q ss_pred             --CCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        844 --HFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       844 --H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                        ....|+..+||.||.+|+...+|+.|.-||.-
T Consensus       350 s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  350 SKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence              23569999999999999999999999888853

>KOG1445|consensus

Probab=99.78  E-value=1.4e-17  Score=179.73  Aligned_cols=223  Identities=15%  Similarity=0.115  Sum_probs=159.1

Q ss_pred             ECCCCEEEEEcCC-CcE----EEEEeCCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-----
Q psy10063        495 SKDHTAKLFTTHD-RQL----LKTYTTERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-----  563 (894)
Q Consensus       495 s~Dg~V~iwdl~~-~~~----~~~~~~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-----  563 (894)
                      +..|.|-||++.. |++    +-.+..+..|..+.|.| |..+|++++.++.              |++|.+..+     
T Consensus       600 g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~--------------i~lWr~~a~gl~e~  665 (1012)
T KOG1445|consen  600 GSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQ--------------INLWRLTANGLPEN  665 (1012)
T ss_pred             CCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCce--------------EEEEEeccCCCCcc
Confidence            4467888888875 332    22333456799999999 5678999999998              555555433     


Q ss_pred             --ceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        564 --EEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       564 --~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                        .....|.+|...|++|.|+|- ...|++++.|-+|++||+.....                                 
T Consensus       666 ~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~---------------------------------  712 (1012)
T KOG1445|consen  666 EMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKL---------------------------------  712 (1012)
T ss_pred             cCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhh---------------------------------
Confidence              345567889999999999993 45789999999999999965421                                 


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       713 --------------------------------------------------------------------------------  712 (1012)
T KOG1445|consen  713 --------------------------------------------------------------------------------  712 (1012)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-eeccc
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-TAGFL  799 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-~~~~~  799 (894)
                                                      ...+.+|.+.|+.++|||||+++|+.+.||.|++|+-++.+. +..-.
T Consensus       713 --------------------------------~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~  760 (1012)
T KOG1445|consen  713 --------------------------------YSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGK  760 (1012)
T ss_pred             --------------------------------hheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCC
Confidence                                            013567999999999999999999999999999999877665 22222


Q ss_pred             cC----CCceEeecCCCeEEEEecCCCCceeEEEeecCCcc--eeeeccCC-CCCeeEEEEeeCCc-EEEEecCCCcEEE
Q psy10063        800 LS----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE--EFARIKGH-FGPINSLAFHPDGK-SYASGGEDGFVRL  871 (894)
Q Consensus       800 ~~----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~--~l~~l~gH-~~~V~~l~fSpdg~-~LaS~s~Dg~V~v  871 (894)
                      ..    ...+.|.-||+++++.+.++...-+|.+||.+.-.  .+....-. .-.+.--.+.+|.. +|++|-.|..|.+
T Consensus       761 gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~  840 (1012)
T KOG1445|consen  761 GPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNM  840 (1012)
T ss_pred             CCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEE
Confidence            11    23577999999999999988766679999986532  22221110 11111223445544 5678889999999


Q ss_pred             EecCc
Q psy10063        872 HTFDQ  876 (894)
Q Consensus       872 Wdl~~  876 (894)
                      |.+-.
T Consensus       841 yEv~~  845 (1012)
T KOG1445|consen  841 YEVIY  845 (1012)
T ss_pred             EEecC
Confidence            99753

>KOG0302|consensus

Probab=99.77  E-value=7.2e-18  Score=172.74  Aligned_cols=191  Identities=20%  Similarity=0.313  Sum_probs=151.3

Q ss_pred             eEEEEEecCCCCEEEEEEccCCC--EEEEecCCCcEEEEecCC----------------CeEEEEecCCCCCCeeEEEEc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQ--YIITGHAKGDICTWDLRM----------------GRELESISGHAKEPINDMQFS  461 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~t----------------g~~~~~l~~h~~~~V~~v~~s  461 (894)
                      .+.+..-.|.+.|..+.-++-++  ++++-+..|.|+||++..                .+.+..+.+|++ .=+.|+||
T Consensus       142 ~~~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~-EGy~LdWS  220 (440)
T KOG0302|consen  142 QIEMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKG-EGYGLDWS  220 (440)
T ss_pred             cccccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCc-cceeeecc
Confidence            44455667889999998888665  666668889999999842                245788889987 88999999


Q ss_pred             CCC-CEEEEEeCCCCc---------------------cceEEEEEec-CCCEEEEEECCCCEEEEEcCCC---cEEEEEe
Q psy10063        462 KDA-TMFITASHSQAV---------------------EPINDMQFSK-DATMFITASKDHTAKLFTTHDR---QLLKTYT  515 (894)
Q Consensus       462 pdg-~~la~~~~d~~i---------------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~  515 (894)
                      |-. ..|++|.-.+.|                     +.|-.|+||| ....|++||.||.|+|||++.+   .++..-.
T Consensus       221 p~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kA  300 (440)
T KOG0302|consen  221 PIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKA  300 (440)
T ss_pred             cccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeec
Confidence            921 223333222222                     6899999999 5678999999999999999988   4555555


Q ss_pred             CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc---cceEEEccCCCCCeEEEEEecC-CCEEEEE
Q psy10063        516 TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF---EEEFARIKGHFGPINSLAFHPD-GKSYASG  591 (894)
Q Consensus       516 ~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~---~~~~~~l~~h~~~V~~l~~spd-g~~l~sg  591 (894)
                      |...|..|.|+.+..+|++|+.+|.              ++|||++.   ++++..|+.|..+|++|.|+|. ...|+++
T Consensus       301 h~sDVNVISWnr~~~lLasG~DdGt--------------~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaas  366 (440)
T KOG0302|consen  301 HNSDVNVISWNRREPLLASGGDDGT--------------LSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAAS  366 (440)
T ss_pred             cCCceeeEEccCCcceeeecCCCce--------------EEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEec
Confidence            7789999999999999999999997              77888763   5678899999999999999985 4578888


Q ss_pred             eCCCcEEEEECCCC
Q psy10063        592 GEDGFLISNTLSNG  605 (894)
Q Consensus       592 s~Dg~I~vwdl~~~  605 (894)
                      +.|.+|.|||+.-.
T Consensus       367 g~D~QitiWDlsvE  380 (440)
T KOG0302|consen  367 GEDNQITIWDLSVE  380 (440)
T ss_pred             cCCCcEEEEEeecc
Confidence            99999999999653

>KOG4227|consensus

Probab=99.77  E-value=3.1e-17  Score=168.02  Aligned_cols=170  Identities=11%  Similarity=0.130  Sum_probs=135.7

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC------CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM------GRELESISGHAKEPINDMQFSKDATMFITASH  472 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t------g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~  472 (894)
                      +..+..+.+|.+.|.+|.||..+++|++|+.|..++||.++.      .+.++....|..                    
T Consensus        46 ~~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~--------------------  105 (609)
T KOG4227|consen   46 PFCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHR--------------------  105 (609)
T ss_pred             chhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccc--------------------
Confidence            344556789999999999999999999999999999999864      344444443332                    


Q ss_pred             CCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        473 SQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       473 d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                          ..|.||+|.-...+|++|..+++|.+.|+++.+.+..+.+.   +.|+.+..+|-...|++.+.++.         
T Consensus       106 ----SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~---------  172 (609)
T KOG4227|consen  106 ----SNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKL---------  172 (609)
T ss_pred             ----cceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCce---------
Confidence                16888999888899999999999999999999999999874   58999999999999999988886         


Q ss_pred             cceeeEEEEeccccc-e--EEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCc
Q psy10063        550 VGKFDARFYHLIFEE-E--FARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~-~--~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                           |.+||.+... .  +..+.......+.+.|+|.. .+|++.+.-+.+-|||++..+
T Consensus       173 -----V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~  228 (609)
T KOG4227|consen  173 -----VSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQA  228 (609)
T ss_pred             -----EEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeecccc
Confidence                 7888877554 1  22223344567889999964 567788888899999987654

>KOG4378|consensus

Probab=99.76  E-value=3.5e-17  Score=172.51  Aligned_cols=280  Identities=13%  Similarity=0.078  Sum_probs=194.8

Q ss_pred             cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC-EEEEEECCCCEEEEEcCCC--
Q psy10063        432 DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT-MFITASKDHTAKLFTTHDR--  508 (894)
Q Consensus       432 ~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~~~--  508 (894)
                      .++|||+...+..-.+..|.. +       |               .+.++.|..... .+++.+.|+.|++|.-...  
T Consensus        13 ~~kl~D~s~~~~~~~~~~~t~-~-------p---------------g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~   69 (673)
T KOG4378|consen   13 KTKLSDFSDLETKSEYVHQTA-E-------P---------------GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTP   69 (673)
T ss_pred             ceEEeecccccCccccccCCC-C-------C---------------cceeeeccccceEEEeecCCceeEEEecccCCCC
Confidence            699999987665555544432 0       0               466677765442 2334467888999964322  


Q ss_pred             cEEE-EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCE
Q psy10063        509 QLLK-TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS  587 (894)
Q Consensus       509 ~~~~-~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~  587 (894)
                      ++-. .....+.-.|++......++++|+..+.              |+|||++...+++.+++|...|.++.+.-...|
T Consensus        70 ~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~--------------Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~Dey  135 (673)
T KOG4378|consen   70 EVPRVRKLTGDNAFCVACASQSLYEISGGQSGC--------------VKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEY  135 (673)
T ss_pred             ccceeeccccchHHHHhhhhcceeeeccCcCce--------------eeehhhHHHHHhhhccCCcceeEEEEecCCcce
Confidence            1211 1112335556666556688888888886              999999988888999999999999999999999


Q ss_pred             EEEEeCCCcEEEEECCCCcccc-----CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEE
Q psy10063        588 YASGGEDGFLISNTLSNGLDIS-----EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVEL  662 (894)
Q Consensus       588 l~sgs~Dg~I~vwdl~~~~~~~-----~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l  662 (894)
                      |++++..|.|.|..+.++....     .++.++.+.|++..+.+                      +..  .+.++.|.+
T Consensus       136 iAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~l----------------------L~~--asd~G~Vtl  191 (673)
T KOG4378|consen  136 IASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFL----------------------LSI--ASDKGAVTL  191 (673)
T ss_pred             eEEeccCCcEEEEecccCccccceecCCCCeEEEeeccccccee----------------------eEe--eccCCeEEE
Confidence            9999999999999998776331     23333334443332221                      222  225666666


Q ss_pred             echhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeecccc
Q psy10063        663 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIE  742 (894)
Q Consensus       663 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~  742 (894)
                      |+.....                                                                ++       
T Consensus       192 wDv~g~s----------------------------------------------------------------p~-------  200 (673)
T KOG4378|consen  192 WDVQGMS----------------------------------------------------------------PI-------  200 (673)
T ss_pred             EeccCCC----------------------------------------------------------------cc-------
Confidence            6622110                                                                00       


Q ss_pred             CcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCceeecccc--CCCceEeecCCCeEEEEec
Q psy10063        743 GTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKATAGFLL--SCPDFLFDFDTTREVTTTS  819 (894)
Q Consensus       743 g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~~~~~--~~~~~~fS~dg~~l~~as~  819 (894)
                                ......|......|+|+|. ..+||+.+.|+.|.+||+...+....+..  ....++|+++|.+|+++..
T Consensus       201 ----------~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s  270 (673)
T KOG4378|consen  201 ----------FHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNS  270 (673)
T ss_pred             ----------cchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecC
Confidence                      1123457777888999997 45677889999999999987776555444  4458899999999999888


Q ss_pred             CCCCceeEEEeecCCc-ceeeeccCCCCCeeEEEEeeCC
Q psy10063        820 TKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDG  857 (894)
Q Consensus       820 d~~g~~~I~vwd~~tg-~~l~~l~gH~~~V~~l~fSpdg  857 (894)
                      .+    .|+.||++.- ..+..+.+|...|++|+|-+..
T Consensus       271 ~G----~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  271 KG----ELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             Cc----eEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence            77    6999999864 5678889999999999998764

>KOG4283|consensus

Probab=99.76  E-value=1.9e-16  Score=157.23  Aligned_cols=172  Identities=16%  Similarity=0.214  Sum_probs=140.2

Q ss_pred             cCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        407 DQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       407 ~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      +|+-.|..+.|-| |-.++.+++.|.+++|||..+.+....|+-..                          .|++-+++
T Consensus        99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~--------------------------~VYshamS  152 (397)
T KOG4283|consen   99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEG--------------------------KVYSHAMS  152 (397)
T ss_pred             cceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCc--------------------------eeehhhcC
Confidence            5888999999999 66689999999999999999998888777554                          35555666


Q ss_pred             c---CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        486 K---DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       486 p---dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      |   .-.+||+|..|-.|++-|+.+|.+.+.+.+ .+.|.++.|+|...+ |++|+.|+.+++|++....+.  +++.|.
T Consensus       153 p~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgc--f~~lD~  230 (397)
T KOG4283|consen  153 PMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGC--FRVLDQ  230 (397)
T ss_pred             hhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccce--eEEeec
Confidence            5   234678888889999999999999999986 589999999999886 566788998777777766655  455565


Q ss_pred             cccceEEEc---cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        561 IFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       561 ~~~~~~~~l---~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ..++....+   ..|.+.|.+++|..||++|++++.|..+++|+...++
T Consensus       231 hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~  279 (397)
T KOG4283|consen  231 HNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR  279 (397)
T ss_pred             ccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence            554433333   4688999999999999999999999999999998876

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.76  E-value=1.3e-15  Score=168.46  Aligned_cols=269  Identities=12%  Similarity=0.093  Sum_probs=169.3

Q ss_pred             EEecCCCcEEEEecCC-Ce--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE-CCCCE
Q psy10063        425 ITGHAKGDICTWDLRM-GR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS-KDHTA  500 (894)
Q Consensus       425 ~sgs~Dg~I~iWd~~t-g~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs-~Dg~V  500 (894)
                      ++...|+.|++||+.+ |+  .++.+... +                         ....|+|+|++++|++++ .++.|
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~~-~-------------------------~~~~l~~spd~~~lyv~~~~~~~i   59 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVVDVP-G-------------------------QVQPMVISPDKRHLYVGVRPEFRV   59 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEEecC-C-------------------------CCccEEECCCCCEEEEEECCCCcE
Confidence            3346789999999964 33  34444422 2                         355667777777776654 46788


Q ss_pred             EEEEcC-CCcE--EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-c---ceEEEccCCC
Q psy10063        501 KLFTTH-DRQL--LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-E---EEFARIKGHF  573 (894)
Q Consensus       501 ~iwdl~-~~~~--~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~---~~~~~l~~h~  573 (894)
                      .+|++. ++++  +..+...+....++|+|+|++|+++...+..             |.+|++.. +   +.+..+.+ .
T Consensus        60 ~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~-------------v~v~~~~~~g~~~~~~~~~~~-~  125 (330)
T PRK11028         60 LSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANC-------------VSVSPLDKDGIPVAPIQIIEG-L  125 (330)
T ss_pred             EEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCe-------------EEEEEECCCCCCCCceeeccC-C
Confidence            899986 3443  2333344567889999999999998764331             67777753 2   22232322 2


Q ss_pred             CCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeec
Q psy10063        574 GPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSG  652 (894)
Q Consensus       574 ~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sg  652 (894)
                      ....+++|+|+|++|++++ .++.|++||++....+....                                        
T Consensus       126 ~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~----------------------------------------  165 (330)
T PRK11028        126 EGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQE----------------------------------------  165 (330)
T ss_pred             CcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccC----------------------------------------
Confidence            3467889999999886554 56899999986422110000                                        


Q ss_pred             cccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccC
Q psy10063        653 SRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDA  732 (894)
Q Consensus       653 s~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~  732 (894)
                          ...+                                                                        
T Consensus       166 ----~~~~------------------------------------------------------------------------  169 (330)
T PRK11028        166 ----PAEV------------------------------------------------------------------------  169 (330)
T ss_pred             ----CCce------------------------------------------------------------------------
Confidence                0000                                                                        


Q ss_pred             CcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CCcEEEEEccC--Cce--eeccc---c----
Q psy10063        733 SPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DKVSERYRDRK--NKA--TAGFL---L----  800 (894)
Q Consensus       733 ~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg~I~iwd~~~--~~~--~~~~~---~----  800 (894)
                                           .+.  .......++|+|++++|+++.. ++.|.+|++..  ++.  +..+.   .    
T Consensus       170 ---------------------~~~--~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~  226 (330)
T PRK11028        170 ---------------------TTV--EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSD  226 (330)
T ss_pred             ---------------------ecC--CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCC
Confidence                                 000  0011346788999999988766 89999999873  221  22111   0    


Q ss_pred             --CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC---CCeeEEEEeeCCcEEEEecC-CCcEEEEec
Q psy10063        801 --SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF---GPINSLAFHPDGKSYASGGE-DGFVRLHTF  874 (894)
Q Consensus       801 --~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~---~~V~~l~fSpdg~~LaS~s~-Dg~V~vWdl  874 (894)
                        ....+.|+|+|++++++.....   .|.+|+++.......+.+|.   ...+.++|+|||++|+++.. ++.|.||++
T Consensus       227 ~~~~~~i~~~pdg~~lyv~~~~~~---~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~  303 (330)
T PRK11028        227 TRWAADIHITPDGRHLYACDRTAS---LISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEI  303 (330)
T ss_pred             CccceeEEECCCCCEEEEecCCCC---eEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEE
Confidence              0114779999999999754322   59999986543222222222   24568999999999987765 899999998


Q ss_pred             C
Q psy10063        875 D  875 (894)
Q Consensus       875 ~  875 (894)
                      +
T Consensus       304 ~  304 (330)
T PRK11028        304 D  304 (330)
T ss_pred             c
Confidence            5

>KOG2445|consensus

Probab=99.76  E-value=2.4e-16  Score=157.81  Aligned_cols=175  Identities=17%  Similarity=0.325  Sum_probs=124.1

Q ss_pred             EEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        404 QVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ..+.|.+.|..|.|.+  -|+.||+++.|++|+||.-.    ...++.|...+|.+..+....            ..|.+
T Consensus        54 ~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~----~~~~~~~~~~Wv~~ttl~Dsr------------ssV~D  117 (361)
T KOG2445|consen   54 SWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQ----EKSEEAHGRRWVRRTTLVDSR------------SSVTD  117 (361)
T ss_pred             eEEecCCcEEEEEecCccccceEEEEecCCceeeeeec----ccccccccceeEEEEEeecCC------------cceeE
Confidence            5567999999999986  68999999999999999832    344455543355544443322            27889


Q ss_pred             EEEec--CCCEEEEEECCCCEEEEEcCCC------cEEEEEe--------CCCCeeEEEEcCC---CCEEEEEECCCCeE
Q psy10063        482 MQFSK--DATMFITASKDHTAKLFTTHDR------QLLKTYT--------TERPVNSAALSPI---LPHVVLGGGQEARE  542 (894)
Q Consensus       482 l~~sp--dg~~L~sgs~Dg~V~iwdl~~~------~~~~~~~--------~~~~v~~l~~spd---g~~l~~~~~~~~~~  542 (894)
                      |+|.|  -|-.||+++.||.||||+.-+-      .+...+.        ++....|+.|++.   ..+|++|+.+..- 
T Consensus       118 V~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~-  196 (361)
T KOG2445|consen  118 VKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAP-  196 (361)
T ss_pred             EEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCc-
Confidence            99988  5778999999999999976542      3333443        3567889999974   3578887766210 


Q ss_pred             EEeccCccceeeEEEEecccc----ceEEEccCCCCCeEEEEEecC-C---CEEEEEeCCCcEEEEECCC
Q psy10063        543 VTTTSTKVGKFDARFYHLIFE----EEFARIKGHFGPINSLAFHPD-G---KSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~----~~~~~l~~h~~~V~~l~~spd-g---~~l~sgs~Dg~I~vwdl~~  604 (894)
                              ..-+++||.....    ..+..|.+|..+|++|+|.|. |   .+|++++.|| |+||.+..
T Consensus       197 --------~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~  257 (361)
T KOG2445|consen  197 --------HLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKV  257 (361)
T ss_pred             --------cccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEee
Confidence                    0011445543322    245567899999999999996 3   3689999999 99998854

>KOG0650|consensus

Probab=99.76  E-value=7.5e-17  Score=173.87  Aligned_cols=243  Identities=15%  Similarity=0.193  Sum_probs=177.9

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEE--EEEECCCCeEEEeccCccc----
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHV--VLGGGQEAREVTTTSTKVG----  551 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l--~~~~~~~~~~v~~~~~~~~----  551 (894)
                      .|.||...|.|.+|++|+.||+|+||.+.+|+|++.+...+.|.||+|+|.+...  +++-+.. +.+.  ....|    
T Consensus       402 ~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~-~~iv--np~~G~~~e  478 (733)
T KOG0650|consen  402 LVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGEC-VLIV--NPIFGDRLE  478 (733)
T ss_pred             eEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCc-eEEe--Cccccchhh
Confidence            7999999999999999999999999999999999999999999999999987653  3333333 2222  21111    


Q ss_pred             -----------------eeeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeCCC---cEEEEECCCCcc
Q psy10063        552 -----------------KFDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGEDG---FLISNTLSNGLD  607 (894)
Q Consensus       552 -----------------~~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg---~I~vwdl~~~~~  607 (894)
                                       ...+..|.-...+    -++....|...|..|.|+.+|.||++...++   .|.|+.+.....
T Consensus       479 ~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~s  558 (733)
T KOG0650|consen  479 VGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKS  558 (733)
T ss_pred             hcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccc
Confidence                             0123455433111    1233445777888888888888888766543   344444422110


Q ss_pred             ccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEee
Q psy10063        608 ISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVN  687 (894)
Q Consensus       608 ~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~  687 (894)
                                                                                                      
T Consensus       559 --------------------------------------------------------------------------------  558 (733)
T KOG0650|consen  559 --------------------------------------------------------------------------------  558 (733)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEe
Q psy10063        688 PFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMP  767 (894)
Q Consensus       688 ~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la  767 (894)
                                                                                       ..-++...+.|.++.
T Consensus       559 -----------------------------------------------------------------Q~PF~kskG~vq~v~  573 (733)
T KOG0650|consen  559 -----------------------------------------------------------------QSPFRKSKGLVQRVK  573 (733)
T ss_pred             -----------------------------------------------------------------cCchhhcCCceeEEE
Confidence                                                                             001111234577888


Q ss_pred             eCCCCCEEEEecCCCcEEEEEccCCceeecccc---CCCceEeecCCCeEEEEecCCCCceeEEEeecCCc-ceeeeccC
Q psy10063        768 EPPKREKLALALADKVSERYRDRKNKATAGFLL---SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE-EEFARIKG  843 (894)
Q Consensus       768 ~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~---~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~g  843 (894)
                      |+|...+|+++... .|+|||+....+++....   .+..+++++.|..|++++-++    .+..||++-+ +..+.++.
T Consensus       574 FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~----k~~WfDldlsskPyk~lr~  648 (733)
T KOG0650|consen  574 FHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDK----KMCWFDLDLSSKPYKTLRL  648 (733)
T ss_pred             ecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCC----eeEEEEcccCcchhHHhhh
Confidence            99999999988764 499999988766555544   455778999999999999988    5899999865 67788999


Q ss_pred             CCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        844 HFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       844 H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      |...|++|+|++--.+|++|+.||.|.|+.
T Consensus       649 H~~avr~Va~H~ryPLfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  649 HEKAVRSVAFHKRYPLFASGSDDGTVIVFH  678 (733)
T ss_pred             hhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence            999999999999999999999999999986

>KOG1524|consensus

Probab=99.73  E-value=8.3e-16  Score=163.63  Aligned_cols=196  Identities=19%  Similarity=0.295  Sum_probs=156.6

Q ss_pred             CCCccceeeeeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCe
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPI  455 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V  455 (894)
                      .....+.+...+.||++........+...+..|.+.|.|-.|+|||.-|+++++||.|+||. ++|.+...+..... .|
T Consensus        71 ~g~~~d~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~-~v  148 (737)
T KOG1524|consen   71 GGKGSDTLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEE-SI  148 (737)
T ss_pred             CCCCcceEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCc-ee
Confidence            34445667778899999988888888888999999999999999999999999999999998 45655444444444 89


Q ss_pred             eEEEEcCCCCEEEEEeCCCCc-----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC
Q psy10063        456 NDMQFSKDATMFITASHSQAV-----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER  518 (894)
Q Consensus       456 ~~v~~spdg~~la~~~~d~~i-----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~  518 (894)
                      +|++|.|+...++.+..+...                 +-|.++.|++...+|++|++|-..+|||....-+...-.|+.
T Consensus       149 ~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey  228 (737)
T KOG1524|consen  149 RCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEY  228 (737)
T ss_pred             EEEEECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhcc
Confidence            999999998887776654433                 678999999999999999999999999977555555555788


Q ss_pred             CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy10063        519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLI  598 (894)
Q Consensus       519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~  598 (894)
                      +|.+++|.|+ +.+++++..-               +|+           -+...+.|..++|++||..+++|...|.|.
T Consensus       229 ~ITSva~npd-~~~~v~S~nt---------------~R~-----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~  281 (737)
T KOG1524|consen  229 AITSVAFNPE-KDYLLWSYNT---------------ARF-----------SSPRVGSIFNLSWSADGTQATCGTSTGQLI  281 (737)
T ss_pred             ceeeeeeccc-cceeeeeeee---------------eee-----------cCCCccceEEEEEcCCCceeeccccCceEE
Confidence            9999999999 5555554322               231           123567899999999999999999888875


Q ss_pred             EE
Q psy10063        599 SN  600 (894)
Q Consensus       599 vw  600 (894)
                      +-
T Consensus       282 ~A  283 (737)
T KOG1524|consen  282 VA  283 (737)
T ss_pred             Ee
Confidence            53

>KOG1034|consensus

Probab=99.73  E-value=8.5e-17  Score=162.35  Aligned_cols=116  Identities=20%  Similarity=0.312  Sum_probs=101.0

Q ss_pred             cCCCCEEEEEEccCC----CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        407 DQSAKITSLLWGNLD----QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       407 ~H~~~V~~l~~spdg----~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      +|......++|+-|-    -+||.|+.-|.|+|.|+.++++.+.+.+|..                         .|..|
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~-------------------------sINei  141 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGG-------------------------SINEI  141 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCc-------------------------cchhh
Confidence            488889999998753    3899999999999999999999999999998                         67777


Q ss_pred             EEecC-CCEEEEEECCCCEEEEEcCCCcEEEEEe----CCCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        483 QFSKD-ATMFITASKDHTAKLFTTHDRQLLKTYT----TERPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       483 ~~spd-g~~L~sgs~Dg~V~iwdl~~~~~~~~~~----~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                      .|.|+ .++|+++|.|..||+|+++++.|+..|.    |.+.|.++.|+.+|.+|+++|.|..+.+|.+.
T Consensus       142 k~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  142 KFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN  211 (385)
T ss_pred             hcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence            77774 5789999999999999999999999987    35789999999999999999999985555444

>KOG1273|consensus

Probab=99.72  E-value=5.1e-16  Score=155.71  Aligned_cols=165  Identities=15%  Similarity=0.198  Sum_probs=132.9

Q ss_pred             ceeeeeccCccEEEecCCC-eEE-E---------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063        381 DRLNSMSPAARKLATNAEP-VVK-M---------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG  449 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~-~~~-~---------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~  449 (894)
                      ...+.|++-|.+||.+... .+. .         .|.+|..+|.||+||+||++|++++.|-.|.+||+..|.++++++.
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            4456789999999887653 222 2         5678999999999999999999999999999999999999999987


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeC--CC--------------------Cc-cceEEEEEecCCCEEEEEECCCCEEEEEcC
Q psy10063        450 HAKEPINDMQFSKDATMFITASH--SQ--------------------AV-EPINDMQFSKDATMFITASKDHTAKLFTTH  506 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~--d~--------------------~i-~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~  506 (894)
                      ..  +|+.+.|+|..+..+++..  ..                    .. ..-.+..|.+.|++|++|...|.+.|+|..
T Consensus       106 ~s--pv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~  183 (405)
T KOG1273|consen  106 DS--PVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE  183 (405)
T ss_pred             cC--ccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence            65  8999999996544333321  11                    11 122334588899999999999999999999


Q ss_pred             CCcEEEEEeCC--CCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        507 DRQLLKTYTTE--RPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       507 ~~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                      +.+++..++..  ..|..+.|+..|+.|+.-+.|+.|+++..+
T Consensus       184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~  226 (405)
T KOG1273|consen  184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS  226 (405)
T ss_pred             hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence            99999988863  689999999999999999999987776544

>KOG0642|consensus

Probab=99.71  E-value=6.1e-17  Score=174.27  Aligned_cols=282  Identities=17%  Similarity=0.164  Sum_probs=183.7

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC--------CeEEEEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM--------GRELESISGHAKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t--------g~~~~~l~~h~~~~V~~v~~spdg~~la~~~  471 (894)
                      .+++.+..|.+.|++++|.+....|++|+.||.|.+|.+..        -+.+..|++|.+                   
T Consensus       285 ~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~g-------------------  345 (577)
T KOG0642|consen  285 NIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEG-------------------  345 (577)
T ss_pred             ceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccC-------------------
Confidence            45568889999999999999999999999999999999932        246788889988                   


Q ss_pred             CCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        472 HSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       472 ~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                            +|.|+++.+.++++++|+.||.|+.|.+...                ..|+.                      
T Consensus       346 ------PVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n----------------~dp~d----------------------  381 (577)
T KOG0642|consen  346 ------PVLCVVVPSNGEHCYSGGIDGTIRCWNLPPN----------------QDPDD----------------------  381 (577)
T ss_pred             ------ceEEEEecCCceEEEeeccCceeeeeccCCC----------------CCccc----------------------
Confidence                  7888888889999999999999999976411                01111                      


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                           .||.  ......+.||.+.|+.+++|+...+|++++.||+||+|+.........+.         .     ...|
T Consensus       382 -----s~dp--~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~---------~-----~e~g  440 (577)
T KOG0642|consen  382 -----SYDP--SVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGE---------P-----KEHG  440 (577)
T ss_pred             -----ccCc--chhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCC---------c-----cccC
Confidence                 0110  01123467999999999999988899999999999999876543210000         0     0000


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                      .-..++...                                                                       
T Consensus       441 ~Plsvd~~s-----------------------------------------------------------------------  449 (577)
T KOG0642|consen  441 YPLSVDRTS-----------------------------------------------------------------------  449 (577)
T ss_pred             CcceEeecc-----------------------------------------------------------------------
Confidence            000000000                                                                       


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                  .+....+....+..        +               .+..+.... .-+++-.+.+...+.++   
T Consensus       450 ------------s~~a~~~~s~~~~~--------~---------------~~~~~ev~s-~~~~~~s~~~~~~~~~~---  490 (577)
T KOG0642|consen  450 ------------SRPAHSLASFRFGY--------T---------------SIDDMEVVS-DLLIFESSASPGPRRYP---  490 (577)
T ss_pred             ------------chhHhhhhhccccc--------c---------------cchhhhhhh-heeeccccCCCcccccC---
Confidence                        00000000000000        0               000000000 01111112222222221   


Q ss_pred             CceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        792 NKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       792 ~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                               .+..++..+.+.+.+.+..+.    .|+++|...++++.....|...|.++++.|.|-+|++++.||.|++
T Consensus       491 ---------~in~vVs~~~~~~~~~~hed~----~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l  557 (577)
T KOG0642|consen  491 ---------QINKVVSHPTADITFTAHEDR----SIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRL  557 (577)
T ss_pred             ---------ccceEEecCCCCeeEecccCC----ceecccccccccchheeeccceecceeecCCCceEEeecCCceeeh
Confidence                     223445666676677766666    6999999999999999999999999999999999999999999999


Q ss_pred             EecCccccccccccCcc
Q psy10063        872 HTFDQAYFDYTFDISEE  888 (894)
Q Consensus       872 Wdl~~~~~~~~~~~~~~  888 (894)
                      |.++...+...+...+.
T Consensus       558 ~kld~k~~~~es~~~r~  574 (577)
T KOG0642|consen  558 WKLDVKTCVLESTAHRK  574 (577)
T ss_pred             hhccchheeeccccccc
Confidence            99988877766655443

>KOG2919|consensus

Probab=99.71  E-value=8.4e-16  Score=154.74  Aligned_cols=243  Identities=18%  Similarity=0.243  Sum_probs=175.9

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCC-----C---------cEEEEEeCCCCeeEEEEc-------CCCCEEEEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHD-----R---------QLLKTYTTERPVNSAALS-------PILPHVVLGG  536 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-----~---------~~~~~~~~~~~v~~l~~s-------pdg~~l~~~~  536 (894)
                      ....+.|+|||..|++-+.|..+++|.+..     +         .....+.....|+..+|-       |+..++++.+
T Consensus        51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss  130 (406)
T KOG2919|consen   51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS  130 (406)
T ss_pred             hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence            467788999999999999999999998742     1         111222335667777775       5566777777


Q ss_pred             CCCCeEEEeccCccceeeEEEEeccccceEEEccC--CCC---CeEEEEEecCCCEEEEEeCCCcEEEEECCC-CccccC
Q psy10063        537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG--HFG---PINSLAFHPDGKSYASGGEDGFLISNTLSN-GLDISE  610 (894)
Q Consensus       537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~--h~~---~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~-~~~~~~  610 (894)
                      .+.-              |++||.-+|+....+++  |..   ...+|+|+|||.+|++|- ...|+|||+.. +.... 
T Consensus       131 r~~P--------------Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~-  194 (406)
T KOG2919|consen  131 RDQP--------------IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCP-  194 (406)
T ss_pred             ccCc--------------eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCc-
Confidence            6665              89999999988776654  333   456899999999998864 57899999842 21100 


Q ss_pred             CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063        611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD  690 (894)
Q Consensus       611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~  690 (894)
                                                                       +.                             
T Consensus       195 -------------------------------------------------vy-----------------------------  196 (406)
T KOG2919|consen  195 -------------------------------------------------VY-----------------------------  196 (406)
T ss_pred             -------------------------------------------------ch-----------------------------
Confidence                                                             00                             


Q ss_pred             CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC
Q psy10063        691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP  770 (894)
Q Consensus       691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp  770 (894)
                                                                 ..+           ..+     ..+..+.|.|++|+|
T Consensus       197 -------------------------------------------~t~-----------~~~-----k~gq~giisc~a~sP  217 (406)
T KOG2919|consen  197 -------------------------------------------TTV-----------TKG-----KFGQKGIISCFAFSP  217 (406)
T ss_pred             -------------------------------------------hhh-----------hcc-----cccccceeeeeeccC
Confidence                                                       000           000     012345577899999


Q ss_pred             C-CCEEEEecCCCcEEEEEccCCce---eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC-cceeeeccCCC
Q psy10063        771 K-REKLALALADKVSERYRDRKNKA---TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHF  845 (894)
Q Consensus       771 d-g~~Latgs~Dg~I~iwd~~~~~~---~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~l~gH~  845 (894)
                      - .+.+|+|+....+-||....+..   +.++..++..++|.+||.+|.+++....   .|..||++. ++.+..|..|.
T Consensus       218 ~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~d---kIl~WDiR~~~~pv~~L~rhv  294 (406)
T KOG2919|consen  218 MDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDD---KILCWDIRYSRDPVYALERHV  294 (406)
T ss_pred             CCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCC---eEEEEeehhccchhhhhhhhc
Confidence            6 45899999999988887666655   4466677889999999999999877654   599999975 46677788887


Q ss_pred             C-CeeEEEE--eeCCcEEEEecCCCcEEEEecCc
Q psy10063        846 G-PINSLAF--HPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       846 ~-~V~~l~f--Spdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      + .=..|.|  .|+|++|++|+.||.|++||+++
T Consensus       295 ~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~  328 (406)
T KOG2919|consen  295 GDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD  328 (406)
T ss_pred             cCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence            6 3334444  58899999999999999999987

>KOG0302|consensus

Probab=99.71  E-value=3.7e-16  Score=160.29  Aligned_cols=200  Identities=18%  Similarity=0.197  Sum_probs=145.7

Q ss_pred             eEEEEEec--CCCEEEEEECCCCEEEEEcCC----------------CcEEEEEeC-CCCeeEEEEcCCC-CEEEEEECC
Q psy10063        479 INDMQFSK--DATMFITASKDHTAKLFTTHD----------------RQLLKTYTT-ERPVNSAALSPIL-PHVVLGGGQ  538 (894)
Q Consensus       479 V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~----------------~~~~~~~~~-~~~v~~l~~spdg-~~l~~~~~~  538 (894)
                      |..+.-++  +..+.++-+..|.|+||++..                .+++..+.+ +..-++|+|||-- ..|++|.-.
T Consensus       154 ~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~  233 (440)
T KOG0302|consen  154 INRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCV  233 (440)
T ss_pred             cceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccc
Confidence            34444443  345666667889999999853                234555553 4667899999932 234544444


Q ss_pred             CCeEEEeccCccceeeEEEEeccccceE---EEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCce
Q psy10063        539 EAREVTTTSTKVGKFDARFYHLIFEEEF---ARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFT  614 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~---~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v  614 (894)
                      +.              |++|...+|...   ..|.+|...|-.|+|||. ...|++|+.||.|+|||++.+....     
T Consensus       234 ~~--------------I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~-----  294 (440)
T KOG0302|consen  234 KG--------------IHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKA-----  294 (440)
T ss_pred             cc--------------eEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccc-----
Confidence            44              666666655432   346789999999999995 4589999999999999997653110     


Q ss_pred             eeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcce
Q psy10063        615 SSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS  694 (894)
Q Consensus       615 ~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  694 (894)
                                                                                                      
T Consensus       295 --------------------------------------------------------------------------------  294 (440)
T KOG0302|consen  295 --------------------------------------------------------------------------------  294 (440)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCE
Q psy10063        695 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREK  774 (894)
Q Consensus       695 ~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~  774 (894)
                                                                                ......|...|..|.|+.+-.+
T Consensus       295 ----------------------------------------------------------~~~~kAh~sDVNVISWnr~~~l  316 (440)
T KOG0302|consen  295 ----------------------------------------------------------AVSTKAHNSDVNVISWNRREPL  316 (440)
T ss_pred             ----------------------------------------------------------eeEeeccCCceeeEEccCCcce
Confidence                                                                      0012346677888899988789


Q ss_pred             EEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEe
Q psy10063        775 LALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  854 (894)
Q Consensus       775 Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fS  854 (894)
                      ||+|+.||.++|||++..+                                        .++.++.++-|..+|++|.|+
T Consensus       317 LasG~DdGt~~iwDLR~~~----------------------------------------~~~pVA~fk~Hk~pItsieW~  356 (440)
T KOG0302|consen  317 LASGGDDGTLSIWDLRQFK----------------------------------------SGQPVATFKYHKAPITSIEWH  356 (440)
T ss_pred             eeecCCCceEEEEEhhhcc----------------------------------------CCCcceeEEeccCCeeEEEec
Confidence            9999999999999976432                                        357788899999999999999


Q ss_pred             eCC-cEEEEecCCCcEEEEecC
Q psy10063        855 PDG-KSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       855 pdg-~~LaS~s~Dg~V~vWdl~  875 (894)
                      |.. ..|+++|.|..|.|||+.
T Consensus       357 p~e~s~iaasg~D~QitiWDls  378 (440)
T KOG0302|consen  357 PHEDSVIAASGEDNQITIWDLS  378 (440)
T ss_pred             cccCceEEeccCCCcEEEEEee
Confidence            854 678889999999999985

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.70  E-value=2.4e-14  Score=158.52  Aligned_cols=322  Identities=13%  Similarity=0.114  Sum_probs=185.3

Q ss_pred             EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEE
Q psy10063        425 ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFT  504 (894)
Q Consensus       425 ~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwd  504 (894)
                      ++-..++.|.|.|..+.+.+.++.....                         ....+.|++||+++++++.||.|.++|
T Consensus        10 V~~~~~~~v~viD~~t~~~~~~i~~~~~-------------------------~h~~~~~s~Dgr~~yv~~rdg~vsviD   64 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNKVVARIPTGGA-------------------------PHAGLKFSPDGRYLYVANRDGTVSVID   64 (369)
T ss_dssp             EEEGGGTEEEEEETTT-SEEEEEE-STT-------------------------EEEEEE-TT-SSEEEEEETTSEEEEEE
T ss_pred             EEecCCCEEEEEECCCCeEEEEEcCCCC-------------------------ceeEEEecCCCCEEEEEcCCCeEEEEE
Confidence            4556789999999999999999986654                         334567889999999999999999999


Q ss_pred             cCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC-------CCCeE
Q psy10063        505 THDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-------FGPIN  577 (894)
Q Consensus       505 l~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h-------~~~V~  577 (894)
                      +.+++.+..+.......++++++||++|+++.....             .+.++|.++.+.++.+...       ...+.
T Consensus        65 ~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~-------------~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~  131 (369)
T PF02239_consen   65 LATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPG-------------TVSVIDAETLEPVKTIPTGGMPVDGPESRVA  131 (369)
T ss_dssp             TTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETT-------------EEEEEETTT--EEEEEE--EE-TTTS---EE
T ss_pred             CCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCC-------------ceeEeccccccceeecccccccccccCCCce
Confidence            999999999998888999999999999999876544             2899999999988876532       34678


Q ss_pred             EEEEecCCCEEEEEeC-CCcEEEEECCCCccc-----cCCCceeeeEECcCCcEEEe---cCCeEEEEecccCCCCCCCe
Q psy10063        578 SLAFHPDGKSYASGGE-DGFLISNTLSNGLDI-----SEGSFTSSSTQQPDGLVYPS---QGGHIHSLSSHSTSSTDTGG  648 (894)
Q Consensus       578 ~l~~spdg~~l~sgs~-Dg~I~vwdl~~~~~~-----~~~~~v~~~~~spdg~~l~~---~~g~i~~~~~~~~~~~d~~~  648 (894)
                      .|..++....++..-. -+.|.+.|+...+.+     ..+.......|.|+|+++..   ....+..++...        
T Consensus       132 aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~--------  203 (369)
T PF02239_consen  132 AIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKT--------  203 (369)
T ss_dssp             EEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTT--------
T ss_pred             eEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeecc--------
Confidence            8888888885555544 477888887765422     34677788888888876622   122222222100        


Q ss_pred             eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE-EecccCcc
Q psy10063        649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL-HVNPFDEQ  727 (894)
Q Consensus       649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l-~v~~~~~~  727 (894)
                              .+.+.+.+.+.         ..+.+....+...........               .+.+... ..      
T Consensus       204 --------~k~v~~i~~g~---------~p~~~~~~~~php~~g~vw~~---------------~~~~~~~~~~------  245 (369)
T PF02239_consen  204 --------GKLVALIDTGK---------KPHPGPGANFPHPGFGPVWAT---------------SGLGYFAIPL------  245 (369)
T ss_dssp             --------TEEEEEEE-SS---------SBEETTEEEEEETTTEEEEEE---------------EBSSSSEEEE------
T ss_pred             --------ceEEEEeeccc---------cccccccccccCCCcceEEee---------------ccccceeccc------
Confidence                    00000100000         000000000000000000000               0111100 00      


Q ss_pred             ccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe----cCCCcEEEEEccCCceeeccccC--
Q psy10063        728 QSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA----LADKVSERYRDRKNKATAGFLLS--  801 (894)
Q Consensus       728 ~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg----s~Dg~I~iwd~~~~~~~~~~~~~--  801 (894)
                        +....+.+++..       ..+..+.+...... ..+..+|++++|++.    ...+.|.++|.++.+.+..+...  
T Consensus       246 --ig~~~v~v~d~~-------~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~  315 (369)
T PF02239_consen  246 --IGTDPVSVHDDY-------AWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPG  315 (369)
T ss_dssp             --EE--TTT-STTT-------BTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT
T ss_pred             --ccCCccccchhh-------cCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCC
Confidence              000011111111       11122223333333 677889999999987    45578999999999877766533  


Q ss_pred             --CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc
Q psy10063        802 --CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK  842 (894)
Q Consensus       802 --~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~  842 (894)
                        .-.+.|++||+++++...+..|  .|.|||.++.+++.++.
T Consensus       316 ~~~~h~ef~~dG~~v~vS~~~~~~--~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  316 KRVVHMEFNPDGKEVWVSVWDGNG--AIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             --EEEEEE-TTSSEEEEEEE--TT--EEEEEETTTTEEEEEEE
T ss_pred             CcEeccEECCCCCEEEEEEecCCC--EEEEEECCCcEEEEEEE
Confidence              3467899999999998888765  69999999999998876

...

>KOG1007|consensus

Probab=99.70  E-value=9.7e-16  Score=152.05  Aligned_cols=286  Identities=14%  Similarity=0.165  Sum_probs=185.7

Q ss_pred             EEEEecCCCCEEEEEEccC-CCEEEEecCC-------CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        402 KMQVTDQSAKITSLLWGNL-DQYIITGHAK-------GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spd-g~~L~sgs~D-------g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      ...|..|.+.|+.|+-+|- .++|+++..|       -.+.||.+.......     ......+++-.+          .
T Consensus        56 skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S-----~~~tlE~v~~Ld----------t  120 (370)
T KOG1007|consen   56 SKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS-----NSSTLECVASLD----------T  120 (370)
T ss_pred             hhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc-----ccchhhHhhcCC----------H
Confidence            3456778999999999994 4566665432       236788875432110     000011111100          0


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-EEEEe------CCCCeeEEEEcC--CCCEEEEEECCCCeEEE
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL-LKTYT------TERPVNSAALSP--ILPHVVLGGGQEAREVT  544 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-~~~~~------~~~~v~~l~~sp--dg~~l~~~~~~~~~~v~  544 (894)
                      ..++.|.||.|.|++..|++-. |..|.+|++..+.. +..+.      +.....+-+|+|  +|..+++.+...     
T Consensus       121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~t-----  194 (370)
T KOG1007|consen  121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDST-----  194 (370)
T ss_pred             HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCc-----
Confidence            1223688999999888888765 88899999987655 33332      245677888998  666776665443     


Q ss_pred             eccCccceeeEEEEeccccceEEEc-cCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcC
Q psy10063        545 TTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPD  622 (894)
Q Consensus       545 ~~~~~~~~~~v~vwd~~~~~~~~~l-~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spd  622 (894)
                                ++.||+++.++...+ ..|...|..|.|.|+.+ +|++|+.||.|+|||.+..+.               
T Consensus       195 ----------l~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~---------------  249 (370)
T KOG1007|consen  195 ----------LQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF---------------  249 (370)
T ss_pred             ----------EEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc---------------
Confidence                      899999988776665 46888999999999865 688999999999999864320               


Q ss_pred             CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063        623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ  702 (894)
Q Consensus       623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~  702 (894)
                                                                                                      
T Consensus       250 --------------------------------------------------------------------------------  249 (370)
T KOG1007|consen  250 --------------------------------------------------------------------------------  249 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCC
Q psy10063        703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALAD  781 (894)
Q Consensus       703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~D  781 (894)
                                                                       .+..+.+|..+|+++.|.|. .++|++|+.|
T Consensus       250 -------------------------------------------------pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD  280 (370)
T KOG1007|consen  250 -------------------------------------------------PVQELPGHSHWVWAVRFNPEHDQLILSGGSD  280 (370)
T ss_pred             -------------------------------------------------cccccCCCceEEEEEEecCccceEEEecCCC
Confidence                                                             01134578899999999997 5667799999


Q ss_pred             CcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EE
Q psy10063        782 KVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SY  860 (894)
Q Consensus       782 g~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~L  860 (894)
                      ..|.+|..........       +.|..|-...    .+...  .=++=-+.. .++..+..|.+.|.+++||.-.. .+
T Consensus       281 s~V~Lsca~svSSE~q-------i~~~~dese~----e~~ds--eer~kpL~d-g~l~tydehEDSVY~~aWSsadPWiF  346 (370)
T KOG1007|consen  281 SAVNLSCASSVSSEQQ-------IEFEDDESES----EDEDS--EERVKPLQD-GQLETYDEHEDSVYALAWSSADPWIF  346 (370)
T ss_pred             ceeEEEeccccccccc-------cccccccccC----cchhh--HHhcccccc-cccccccccccceEEEeeccCCCeeE
Confidence            9999997543221111       1111111100    00000  001111121 23567889999999999997555 56


Q ss_pred             EEecCCCcEEEEecCc
Q psy10063        861 ASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       861 aS~s~Dg~V~vWdl~~  876 (894)
                      |+-+.||.|.|=.+..
T Consensus       347 ASLSYDGRviIs~V~r  362 (370)
T KOG1007|consen  347 ASLSYDGRVIISSVPR  362 (370)
T ss_pred             EEeccCceEEeecCCh
Confidence            7899999999888754

>KOG0303|consensus

Probab=99.70  E-value=6.6e-16  Score=159.27  Aligned_cols=163  Identities=15%  Similarity=0.200  Sum_probs=137.3

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCe-------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGR-------ELESISGHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~-------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      .+.||.+.|..++|+| +...||+||+|.+|.||++..+.       .+..|.+|..                       
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~r-----------------------  132 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQR-----------------------  132 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecce-----------------------
Confidence            5678999999999999 45589999999999999997653       4667777776                       


Q ss_pred             ccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        476 VEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       476 i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                        .|.-|+|+| -...|++++.|..|.||++.+|+.+..+.|.+.|++++|+.||.+|++.+.|..              
T Consensus       133 --rVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKk--------------  196 (472)
T KOG0303|consen  133 --RVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKK--------------  196 (472)
T ss_pred             --eEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccce--------------
Confidence              566677777 456889999999999999999999999999999999999999999999999997              


Q ss_pred             EEEEeccccceEEEccCCCC-CeEEEEEecCCCEEEEE---eCCCcEEEEECCCC
Q psy10063        555 ARFYHLIFEEEFARIKGHFG-PINSLAFHPDGKSYASG---GEDGFLISNTLSNG  605 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~-~V~~l~~spdg~~l~sg---s~Dg~I~vwdl~~~  605 (894)
                      |||||.+.++.+..-.+|.+ .-..+.|-.+|.++-+|   ..+.++-+||....
T Consensus       197 vRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl  251 (472)
T KOG0303|consen  197 VRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNL  251 (472)
T ss_pred             eEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccc
Confidence            99999999999998888876 44556688888855444   24778999987654

>KOG0307|consensus

Probab=99.70  E-value=8e-17  Score=186.56  Aligned_cols=244  Identities=16%  Similarity=0.205  Sum_probs=183.7

Q ss_pred             CCCEEEEEEccCCCE----EEEecCCCcEEEEecCCC------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        409 SAKITSLLWGNLDQY----IITGHAKGDICTWDLRMG------RELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       409 ~~~V~~l~~spdg~~----L~sgs~Dg~I~iWd~~tg------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ..+...|+|++.|..    ||-|.+||.|.+||...-      ..+..+..|.+                         .
T Consensus        64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G-------------------------~  118 (1049)
T KOG0307|consen   64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTG-------------------------P  118 (1049)
T ss_pred             cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCC-------------------------c
Confidence            356788999987764    888899999999997642      23455566776                         6


Q ss_pred             eEEEEEecC-CCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCcccee
Q psy10063        479 INDMQFSKD-ATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGKF  553 (894)
Q Consensus       479 V~~l~~spd-g~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~~  553 (894)
                      |..|.|.+. +.+||+|+.||.|.|||+...+.-..+.   ..+.|.+|+|...-.+|++.+ ..+.             
T Consensus       119 V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~-------------  185 (1049)
T KOG0307|consen  119 VLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGR-------------  185 (1049)
T ss_pred             eeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCC-------------
Confidence            777888885 4599999999999999998755444442   247899999998776655544 4444             


Q ss_pred             eEEEEeccccceEEEccCCCC--CeEEEEEecCCC-EEEEEeCCC---cEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        554 DARFYHLIFEEEFARIKGHFG--PINSLAFHPDGK-SYASGGEDG---FLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~-~l~sgs~Dg---~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                       +.|||++..+.+..+..|.+  .+..|+|+|+.. .|++++.|.   .|.+||++-..                     
T Consensus       186 -~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as---------------------  243 (1049)
T KOG0307|consen  186 -AVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS---------------------  243 (1049)
T ss_pred             -ceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC---------------------
Confidence             78999999888888876655  477899999864 455555543   47888874210                     


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                                                                                                      
T Consensus       244 --------------------------------------------------------------------------------  243 (1049)
T KOG0307|consen  244 --------------------------------------------------------------------------------  243 (1049)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC-CEEEEecCCCcEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR-EKLALALADKVSER  786 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg-~~Latgs~Dg~I~i  786 (894)
                                                                 ...+++.+|...|.+|.|++.+ ++|++++.|+.|  
T Consensus       244 -------------------------------------------sP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~i--  278 (1049)
T KOG0307|consen  244 -------------------------------------------SPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRI--  278 (1049)
T ss_pred             -------------------------------------------CchhhhcccccceeeeccCCCCchhhhcccCCCCe--
Confidence                                                       0112456788899999999976 888888888865  


Q ss_pred             EEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEecC
Q psy10063        787 YRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGE  865 (894)
Q Consensus       787 wd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s~  865 (894)
                                                               .+|+..+|+.+..+.....++..+.|+|... .|+.++.
T Consensus       279 -----------------------------------------i~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asf  317 (1049)
T KOG0307|consen  279 -----------------------------------------ICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASF  317 (1049)
T ss_pred             -----------------------------------------eEecCCCceEeeecCCCCcceeeeeecCCCcchhhhhee
Confidence                                                     4555566777777777778899999999775 7888999


Q ss_pred             CCcEEEEecCccc
Q psy10063        866 DGFVRLHTFDQAY  878 (894)
Q Consensus       866 Dg~V~vWdl~~~~  878 (894)
                      ||.|.||.+.+..
T Consensus       318 dgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  318 DGKISIYSLQGTD  330 (1049)
T ss_pred             ccceeeeeeecCC
Confidence            9999999997654

>KOG4497|consensus

Probab=99.70  E-value=1.2e-15  Score=153.69  Aligned_cols=345  Identities=12%  Similarity=0.075  Sum_probs=202.8

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      -++|||+|++||++++- .+.|-|..+-+.++.|..-.                          .|..|.|..|..+++.
T Consensus        13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cld--------------------------ki~yieW~ads~~ilC   65 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLD--------------------------KIVYIEWKADSCHILC   65 (447)
T ss_pred             ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHH--------------------------Hhhheeeeccceeeee
Confidence            35799999999999865 78888887777655554432                          4666777776665554


Q ss_pred             -EECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC
Q psy10063        494 -ASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG  571 (894)
Q Consensus       494 -gs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~  571 (894)
                       ...|+.|.+|++...+....+.. ..++.+++|||||++|+..+.-...             |.+|.+.+.+... ++.
T Consensus        66 ~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lr-------------iTVWSL~t~~~~~-~~~  131 (447)
T KOG4497|consen   66 VAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLR-------------ITVWSLNTQKGYL-LPH  131 (447)
T ss_pred             eeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeE-------------EEEEEeccceeEE-ecc
Confidence             46678999999998888777774 6889999999999998887765542             7888887666543 334


Q ss_pred             CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc---ccc----CCCceeeeEECcCCcEEEecCCeEEEEecccCCCC
Q psy10063        572 HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL---DIS----EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSST  644 (894)
Q Consensus       572 h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~---~~~----~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~  644 (894)
                      .+..+..++|++||++.+.++.-...-.+.+...+   .++    .-.....+.|+|||.+++.-+..+....       
T Consensus       132 pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv-------  204 (447)
T KOG4497|consen  132 PKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKV-------  204 (447)
T ss_pred             cccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhhee-------
Confidence            45567999999999998877653221111111110   010    1223345677777766632221110000       


Q ss_pred             CCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEeccc
Q psy10063        645 DTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPF  724 (894)
Q Consensus       645 d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~  724 (894)
                                                     ...+                       .......+++++.++.++++..
T Consensus       205 -------------------------------~aYe-----------------------~~lG~k~v~wsP~~qflavGsy  230 (447)
T KOG4497|consen  205 -------------------------------YAYE-----------------------RGLGLKFVEWSPCNQFLAVGSY  230 (447)
T ss_pred             -------------------------------eeee-----------------------eccceeEEEeccccceEEeecc
Confidence                                           0000                       0011122455666666666555


Q ss_pred             CccccccCCcceeeccccCcccccCCCCcceecCCCC---------------ceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        725 DEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD---------------IGFKMPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       725 ~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~---------------~v~~la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                      |...       .+.   ....|+.-++.+....-|..               ...|+.|.|..         -...+|..
T Consensus       231 D~~l-------rvl---nh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~---------~~a~~~~~  291 (447)
T KOG4497|consen  231 DQML-------RVL---NHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTD---------LEAHIWEE  291 (447)
T ss_pred             chhh-------hhh---ceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCc---------cccCcccc
Confidence            5431       111   11233444443332221110               01123333221         11112211


Q ss_pred             c--------------CCceee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEE
Q psy10063        790 R--------------KNKATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  852 (894)
Q Consensus       790 ~--------------~~~~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~  852 (894)
                      .              ..+...   .-..++..++|++|..++++-...--.  .+.|||++..++...|. ...+|.+..
T Consensus       292 se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~Pn--alW~Wdlq~l~l~avLi-Qk~piraf~  368 (447)
T KOG4497|consen  292 SETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPN--ALWLWDLQNLKLHAVLI-QKHPIRAFE  368 (447)
T ss_pred             chhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCc--eEEEEechhhhhhhhhh-hccceeEEE
Confidence            1              001000   112345678899999998876554221  48999999776665553 457899999


Q ss_pred             EeeCCcEEEEecCCCcEEEEecCccccccc
Q psy10063        853 FHPDGKSYASGGEDGFVRLHTFDQAYFDYT  882 (894)
Q Consensus       853 fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~  882 (894)
                      |.|....|+.+.....+++|...+...+..
T Consensus       369 WdP~~prL~vctg~srLY~W~psg~~~V~v  398 (447)
T KOG4497|consen  369 WDPGRPRLVVCTGKSRLYFWAPSGPRVVGV  398 (447)
T ss_pred             eCCCCceEEEEcCCceEEEEcCCCceEEec
Confidence            999998888887777899999876544433

>KOG0307|consensus

Probab=99.69  E-value=8.3e-17  Score=186.43  Aligned_cols=231  Identities=19%  Similarity=0.212  Sum_probs=170.8

Q ss_pred             CCCEEEEEc--CCC----cEEEEEeCCCCeeEEEEcCCCCE----EEEEECCCCeEEEeccCccceeeEEEEeccc----
Q psy10063        497 DHTAKLFTT--HDR----QLLKTYTTERPVNSAALSPILPH----VVLGGGQEAREVTTTSTKVGKFDARFYHLIF----  562 (894)
Q Consensus       497 Dg~V~iwdl--~~~----~~~~~~~~~~~v~~l~~spdg~~----l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~----  562 (894)
                      +..+.||.+  .+.    +.+..+....+...|+|.+.|..    |+.|..+|.              |.+||...    
T Consensus        38 ~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~--------------I~ly~p~~~~~~  103 (1049)
T KOG0307|consen   38 SASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGN--------------IVLYDPASIIAN  103 (1049)
T ss_pred             ccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCCc--------------eEEecchhhccC
Confidence            445555544  332    34555666788999999998887    666777776              55666543    


Q ss_pred             --cceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        563 --EEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       563 --~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                        ...+..+..|.+.|..|.|.+.+. +|++|+.||.|.|||+...+.-.          .+                  
T Consensus       104 ~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~----------~~------------------  155 (1049)
T KOG0307|consen  104 ASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPF----------TP------------------  155 (1049)
T ss_pred             cchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCC----------CC------------------
Confidence              234556678999999999999766 99999999999999997532100          00                  


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                  +                                                                   
T Consensus       156 ------------~-------------------------------------------------------------------  156 (1049)
T KOG0307|consen  156 ------------G-------------------------------------------------------------------  156 (1049)
T ss_pred             ------------C-------------------------------------------------------------------
Confidence                        0                                                                   


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCceeecc
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKATAGF  798 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~~~  798 (894)
                                                          -....+.|.+|+|... .+.||+++.+|.+.|||++..+.+..+
T Consensus       157 ------------------------------------~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~l  200 (1049)
T KOG0307|consen  157 ------------------------------------SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKL  200 (1049)
T ss_pred             ------------------------------------CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCccccc
Confidence                                                0011234556666654 567889999999999999999877665


Q ss_pred             ccC-----CCceEeecCCC-eEEEEecCCCCceeEEEeecCCc-ceeeeccCCCCCeeEEEEeeCC-cEEEEecCCCcEE
Q psy10063        799 LLS-----CPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFVR  870 (894)
Q Consensus       799 ~~~-----~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~gH~~~V~~l~fSpdg-~~LaS~s~Dg~V~  870 (894)
                      ...     +..+.|+|+.. .++++++|.... .|.+||++.- ..++.+++|...|.+|.|++.+ ++|+|++.|+.|.
T Consensus       201 s~~~~~~~~S~l~WhP~~aTql~~As~dd~~P-viqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii  279 (1049)
T KOG0307|consen  201 SDTPGRMHCSVLAWHPDHATQLLVASGDDSAP-VIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRII  279 (1049)
T ss_pred             ccCCCccceeeeeeCCCCceeeeeecCCCCCc-eeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCee
Confidence            544     44778999876 566666665433 5999998754 5667889999999999999877 8999999999999


Q ss_pred             EEecCcccccccccc
Q psy10063        871 LHTFDQAYFDYTFDI  885 (894)
Q Consensus       871 vWdl~~~~~~~~~~~  885 (894)
                      +|+.++++.+..+-.
T Consensus       280 ~wN~~tgEvl~~~p~  294 (1049)
T KOG0307|consen  280 CWNPNTGEVLGELPA  294 (1049)
T ss_pred             EecCCCceEeeecCC
Confidence            999999998887754

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=3.6e-15  Score=170.37  Aligned_cols=236  Identities=11%  Similarity=0.045  Sum_probs=158.7

Q ss_pred             CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC---CCEEEEEcC
Q psy10063        430 KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD---HTAKLFTTH  506 (894)
Q Consensus       430 Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D---g~V~iwdl~  506 (894)
                      +..|+|||.+... .+.+..|..                         .+.+++|+|||++|+.++.+   ..|++||+.
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~-------------------------~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~  236 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQ-------------------------PLMSPAWSPDGSKLAYVSFENKKSQLVVHDLR  236 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCC-------------------------ccccceEcCCCCEEEEEEecCCCcEEEEEeCC
Confidence            4689999986444 555666665                         46666667777767666543   469999999


Q ss_pred             CCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCC
Q psy10063        507 DRQLLKTYTTERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG  585 (894)
Q Consensus       507 ~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg  585 (894)
                      .++........+...+++|+|||++|+++.. ++..            +|.+||+..++ +..+..|...+.+++|+|||
T Consensus       237 tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~------------~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG  303 (429)
T PRK01742        237 SGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVL------------NIYVMGANGGT-PSQLTSGAGNNTEPSWSPDG  303 (429)
T ss_pred             CCceEEEecCCCccCceeECCCCCEEEEEEecCCcE------------EEEEEECCCCC-eEeeccCCCCcCCEEECCCC
Confidence            8865444333444567999999999988764 4432            35667776555 45566677778899999999


Q ss_pred             CEEEEEe-CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEec
Q psy10063        586 KSYASGG-EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTK  664 (894)
Q Consensus       586 ~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~  664 (894)
                      ++|+.++ .+|.+.||+++....                        .                           .    
T Consensus       304 ~~i~f~s~~~g~~~I~~~~~~~~------------------------~---------------------------~----  328 (429)
T PRK01742        304 QSILFTSDRSGSPQVYRMSASGG------------------------G---------------------------A----  328 (429)
T ss_pred             CEEEEEECCCCCceEEEEECCCC------------------------C---------------------------e----
Confidence            9877665 567788886532100                        0                           0    


Q ss_pred             hhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCc
Q psy10063        665 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT  744 (894)
Q Consensus       665 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~  744 (894)
                                                                                                      
T Consensus       329 --------------------------------------------------------------------------------  328 (429)
T PRK01742        329 --------------------------------------------------------------------------------  328 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-cccCCCceEeecCCCeEEEEecCCCC
Q psy10063        745 PFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-FLLSCPDFLFDFDTTREVTTTSTKVG  823 (894)
Q Consensus       745 ~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-~~~~~~~~~fS~dg~~l~~as~d~~g  823 (894)
                               ..+ .+..  .+++|+|||++|+..+.++ |.+||+..++...- .......+.|+|||++++.++.++. 
T Consensus       329 ---------~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~-  394 (429)
T PRK01742        329 ---------SLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGL-  394 (429)
T ss_pred             ---------EEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCC-
Confidence                     000 0111  2356789999998887765 56689877754321 1123356789999999999887653 


Q ss_pred             ceeEEEeec--CCcceeeeccCCCCCeeEEEEeeC
Q psy10063        824 KFDARFYHL--IFEEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       824 ~~~I~vwd~--~tg~~l~~l~gH~~~V~~l~fSpd  856 (894)
                         +++|++  ..|+.+..+.+|.+.+..++|+|-
T Consensus       395 ---~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        395 ---GKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             ---ceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence               444443  357888889999999999999974

>KOG0270|consensus

Probab=99.68  E-value=7.8e-16  Score=161.35  Aligned_cols=162  Identities=15%  Similarity=0.269  Sum_probs=135.5

Q ss_pred             cCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        407 DQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      +|.+.|.+|+|...-+ .||+||.|.+|++||+.+|++...+..|.+                         .|.+++|+
T Consensus       241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k-------------------------~Vq~l~wh  295 (463)
T KOG0270|consen  241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGK-------------------------KVQTLEWH  295 (463)
T ss_pred             cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCC-------------------------ceeEEEec
Confidence            6999999999988644 899999999999999999999999997777                         56666776


Q ss_pred             c-CCCEEEEEECCCCEEEEEcCC-CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        486 K-DATMFITASKDHTAKLFTTHD-RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       486 p-dg~~L~sgs~Dg~V~iwdl~~-~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      | ...+|++|++|++|.|.|.+. ...-..++..+.|..++|.+.....+.++.+...             |+-+|++..
T Consensus       296 ~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~-------------v~~~D~R~~  362 (463)
T KOG0270|consen  296 PYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGT-------------VYYFDIRNP  362 (463)
T ss_pred             CCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCce-------------EEeeecCCC
Confidence            6 577899999999999999995 3334556678899999999988776666655443             888888765


Q ss_pred             -ceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCc
Q psy10063        564 -EEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       564 -~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                       +++..++.|.+.|.+|+++..- .+|++++.|+.|++|++....
T Consensus       363 ~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~  407 (463)
T KOG0270|consen  363 GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS  407 (463)
T ss_pred             CCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCC
Confidence             8999999999999999998754 468899999999999987644

>KOG0270|consensus

Probab=99.68  E-value=1.2e-15  Score=160.04  Aligned_cols=171  Identities=15%  Similarity=0.260  Sum_probs=113.4

Q ss_pred             EEEEEccC-------CCEEEEecCCCcEEEEecCCCeEE---EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        413 TSLLWGNL-------DQYIITGHAKGDICTWDLRMGREL---ESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       413 ~~l~~spd-------g~~L~sgs~Dg~I~iWd~~tg~~~---~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .|++|.-.       |.|+|.|..|..|.|||+.-...+   ..|. ...+.+.. .   .++  -.-+..++-..|.+|
T Consensus       177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LG-s~~sk~~~-k---~~k--~~~~~~gHTdavl~L  249 (463)
T KOG0270|consen  177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLG-SKASKKKK-K---KGK--RSNSASGHTDAVLAL  249 (463)
T ss_pred             hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeec-hhhhhhhh-h---hcc--cccccccchHHHHHH
Confidence            56666532       569999999999999998632111   1111 00000000 0   000  000111122256677


Q ss_pred             EEecC-CCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        483 QFSKD-ATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       483 ~~spd-g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +|... ...||+||.|.+|++||+..|++...+.+ .+.|.+++|+|.. .+|++|+.++.              |++.|
T Consensus       250 s~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~--------------V~l~D  315 (463)
T KOG0270|consen  250 SWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGT--------------VALKD  315 (463)
T ss_pred             HhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccce--------------EEeee
Confidence            77663 46799999999999999999999999995 6899999999964 57788888887              77778


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSN  604 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~  604 (894)
                      ++........-...+.|-.++|.+... .++++..||.|+-+|++.
T Consensus       316 ~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~  361 (463)
T KOG0270|consen  316 CRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRN  361 (463)
T ss_pred             ccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCC
Confidence            774222222223457889999998654 577778899999999864

>KOG0649|consensus

Probab=99.68  E-value=2e-14  Score=139.46  Aligned_cols=154  Identities=18%  Similarity=0.206  Sum_probs=117.1

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCe----------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGR----------ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~----------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .|.+-+|+|.+++|+.|..+|.|.|+.+.+..          .+..+++|.+                         +|+
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdg-------------------------piy   66 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDG-------------------------PIY   66 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCC-------------------------Cee
Confidence            45667899999999999999999999875321          1222234444                         788


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcE------EEEEe---C-----CCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQL------LKTYT---T-----ERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~------~~~~~---~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                      .++|..  .+|++|+ ||.|+-|..+....      +...+   +     --.|.+|.+.|....|+.+++|+.      
T Consensus        67 ~~~f~d--~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~------  137 (325)
T KOG0649|consen   67 YLAFHD--DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGV------  137 (325)
T ss_pred             eeeeeh--hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeE------
Confidence            888873  4566664 59999887653221      11111   1     135889999999888888888886      


Q ss_pred             cCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                              +..||+++|+..+.++||.+.|.+++--.....|++|++||.+||||.++.+
T Consensus       138 --------~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k  189 (325)
T KOG0649|consen  138 --------IYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQK  189 (325)
T ss_pred             --------EEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccc
Confidence                    8899999999999999999999999985555679999999999999998765

>KOG2110|consensus

Probab=99.67  E-value=6e-14  Score=144.37  Aligned_cols=114  Identities=20%  Similarity=0.334  Sum_probs=92.0

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC----CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT----ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .|.+|.+..  ++|+++-++. |+|||+++.++++.+..    ...+.+++++..+.+|+.-+....            .
T Consensus        89 ~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~------------G  153 (391)
T KOG2110|consen   89 SILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTS------------G  153 (391)
T ss_pred             ceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCC------------c
Confidence            566777653  5677775554 99999999999998874    345777777777778888654332            3


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc-EEEEECCCCc
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF-LISNTLSNGL  606 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~-I~vwdl~~~~  606 (894)
                      +|.+||+..-+.+..+..|++.+-+|+|+++|.+||++++.|+ ||||.+..++
T Consensus       154 dV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~  207 (391)
T KOG2110|consen  154 DVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQ  207 (391)
T ss_pred             eEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCcc
Confidence            5999999999999999999999999999999999999999987 6888886554

>KOG1524|consensus

Probab=99.67  E-value=8.8e-15  Score=155.95  Aligned_cols=198  Identities=20%  Similarity=0.228  Sum_probs=131.4

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC----------------CCeeEEE-EcCCCCEEEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK----------------EPINDMQ-FSKDATMFIT  469 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~----------------~~V~~v~-~spdg~~la~  469 (894)
                      .|...|.|+.|+.....+++++++-.+.-||+.... +..+.-...                ..--.+. -+.||++.+ 
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s-~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~i-   89 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDS-VEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVI-   89 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchh-hhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEE-
Confidence            477788899999887777776655444444543322 111111000                0111111 122333222 


Q ss_pred             EeCCCCc--------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        470 ASHSQAV--------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       470 ~~~d~~i--------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      .+..+.+        +.|.|-.|+|||.-|+++++||.|+||. ++|-+...+. ....|+|++|.|+...++.+.++. 
T Consensus        90 l~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h-  167 (737)
T KOG1524|consen   90 LNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGH-  167 (737)
T ss_pred             ecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecCCe-
Confidence            2222222        6788999999999999999999999997 4454444443 467899999999998888877665 


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc---cCCCceeee
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI---SEGSFTSSS  617 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~---~~~~~v~~~  617 (894)
                                    +.+-.+.....+-+.+.|++-|.++.|++...+|++|++|-..+|||.......   .+...+.++
T Consensus       168 --------------~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSv  233 (737)
T KOG1524|consen  168 --------------ISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSV  233 (737)
T ss_pred             --------------EEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeee
Confidence                          444445545555667899999999999999999999999999999997654322   234455566


Q ss_pred             EECcC
Q psy10063        618 TQQPD  622 (894)
Q Consensus       618 ~~spd  622 (894)
                      +|.|+
T Consensus       234 a~npd  238 (737)
T KOG1524|consen  234 AFNPE  238 (737)
T ss_pred             eeccc
Confidence            66665

>KOG1517|consensus

Probab=99.67  E-value=1.2e-14  Score=166.02  Aligned_cols=286  Identities=19%  Similarity=0.237  Sum_probs=197.6

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec--C
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK--D  487 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp--d  487 (894)
                      +.-..+.|+|-...|+++.+...|+|||.+.++++..|..+..         ++             ..|..|.+-.  |
T Consensus      1065 ~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~---------~~-------------t~Vs~l~liNe~D 1122 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAF---------PD-------------TRVSDLELINEQD 1122 (1387)
T ss_pred             CCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCC---------CC-------------Cccceeeeecccc
Confidence            4567788999889999998777999999999999887765432         00             1577777755  5


Q ss_pred             CCEEEEEECCCCEEEEEcC-C----CcEEEEEeC--------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        488 ATMFITASKDHTAKLFTTH-D----RQLLKTYTT--------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~-~----~~~~~~~~~--------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      ..+|++|+.||.||||+-. .    .+++..+..        .+.-.-+.|-....+|+++|+-+.              
T Consensus      1123 ~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~-------------- 1188 (1387)
T KOG1517|consen 1123 DALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRS-------------- 1188 (1387)
T ss_pred             hhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeE--------------
Confidence            6789999999999999632 2    233332221        111245677777778888776443              


Q ss_pred             EEEEeccccceEEEccC-CCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063        555 ARFYHLIFEEEFARIKG-HFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~-h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                      |||||.....+++.+.. ....|++|.-+. .|..|++|-.||.|++||.+....                         
T Consensus      1189 IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~------------------------- 1243 (1387)
T KOG1517|consen 1189 IRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP------------------------- 1243 (1387)
T ss_pred             EEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCc-------------------------
Confidence            89999988777776643 344666665443 478999999999999999864321                         


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                                              +..|..                                                  
T Consensus      1244 ------------------------ds~v~~-------------------------------------------------- 1249 (1387)
T KOG1517|consen 1244 ------------------------DSLVCV-------------------------------------------------- 1249 (1387)
T ss_pred             ------------------------ccccee--------------------------------------------------
Confidence                                    000111                                                  


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCc--eEEEeeCCCCC-EEEEecCCCcEEEEEc
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDI--GFKMPEPPKRE-KLALALADKVSERYRD  789 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~--v~~la~spdg~-~Latgs~Dg~I~iwd~  789 (894)
                                                                 .+.|.+.  |..+.+-+.|- .|++|+.||.|++||+
T Consensus      1250 -------------------------------------------~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~Dl 1286 (1387)
T KOG1517|consen 1250 -------------------------------------------YREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDL 1286 (1387)
T ss_pred             -------------------------------------------ecccCCcccceeEEeecCCCcceeeeccCCeEEEEec
Confidence                                                       1112222  44555555443 5999999999999999


Q ss_pred             cCC-ce-----eeccccC--CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-------CCCCeeEEEEe
Q psy10063        790 RKN-KA-----TAGFLLS--CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-------HFGPINSLAFH  854 (894)
Q Consensus       790 ~~~-~~-----~~~~~~~--~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-------H~~~V~~l~fS  854 (894)
                      +.. +.     ......+  ..++..+.+...++++++ +    .|+||++. |+.+..++.       ..+.+.||+|+
T Consensus      1287 R~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q----~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FH 1360 (1387)
T KOG1517|consen 1287 RMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-Q----LIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFH 1360 (1387)
T ss_pred             ccCcccccceeeeccccCccceeeeeccCCCeeeecCc-c----eEEEEecC-hhhhcccccCcccccCcCCCcceeeec
Confidence            873 21     1111123  556777888888888877 3    59999997 555544442       24568999999


Q ss_pred             eCCcEEEEecCCCcEEEEecCcccc
Q psy10063        855 PDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       855 pdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      |-.-+||.|+.|..|.||..+...+
T Consensus      1361 P~~~llAaG~~Ds~V~iYs~~k~~~ 1385 (1387)
T KOG1517|consen 1361 PHRLLLAAGSADSTVSIYSCEKPRL 1385 (1387)
T ss_pred             chhHhhhhccCCceEEEeecCCcCC
Confidence            9999999999999999999877654

>KOG1334|consensus

Probab=99.66  E-value=7.1e-16  Score=163.07  Aligned_cols=307  Identities=15%  Similarity=0.156  Sum_probs=211.1

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec-CCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS-GHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~-~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      +...|.+|.+.|..|.|...|.+|++|+.|..|.|||...++.+..|. +|..                         .|
T Consensus       134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~-------------------------Nv  188 (559)
T KOG1334|consen  134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCN-------------------------NV  188 (559)
T ss_pred             hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCccccccccccc-------------------------ch
Confidence            334678999999999999999999999999999999999998877665 5655                         44


Q ss_pred             EEEEEec--CCCEEEEEECCCCEEEEEcC-CCcEE---EEEeCCCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccce
Q psy10063        480 NDMQFSK--DATMFITASKDHTAKLFTTH-DRQLL---KTYTTERPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       480 ~~l~~sp--dg~~L~sgs~Dg~V~iwdl~-~~~~~---~~~~~~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      ....|.|  +.+-|++++.||.|++=.+. ++.+.   +...|++.|..++.-|+..+ |++++.++.            
T Consensus       189 fQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~------------  256 (559)
T KOG1334|consen  189 FQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAV------------  256 (559)
T ss_pred             hhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccc------------
Confidence            4555555  44568999999999988765 34433   33447899999999998765 566666665            


Q ss_pred             eeEEEEeccccceEEEc---cCCCC---CeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063        553 FDARFYHLIFEEEFARI---KGHFG---PINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l---~~h~~---~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~  625 (894)
                        +.-+|++.+.....+   ..+..   ....++..|... ++++|+.|..+++||.+.......               
T Consensus       257 --v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~---------------  319 (559)
T KOG1334|consen  257 --VFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEEN---------------  319 (559)
T ss_pred             --eeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccc---------------
Confidence              555566555433322   22333   566778887554 788999999999998754321100               


Q ss_pred             EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063        626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM  705 (894)
Q Consensus       626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~  705 (894)
                          .|   .+.  .                                                        |.+.     
T Consensus       320 ----n~---~~~--~--------------------------------------------------------f~p~-----  329 (559)
T KOG1334|consen  320 ----NG---VLD--K--------------------------------------------------------FCPH-----  329 (559)
T ss_pred             ----cc---hhh--h--------------------------------------------------------cCCc-----
Confidence                00   000  0                                                        0000     


Q ss_pred             EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEE
Q psy10063        706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSE  785 (894)
Q Consensus       706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~  785 (894)
                                                                      .++....-.|.|++|+.++.-|+++-.|-.|+
T Consensus       330 ------------------------------------------------hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IY  361 (559)
T KOG1334|consen  330 ------------------------------------------------HLVEDDPVNITGLVYSHDGSELLASYNDEDIY  361 (559)
T ss_pred             ------------------------------------------------cccccCcccceeEEecCCccceeeeecccceE
Confidence                                                            00001122467888887777777777777788


Q ss_pred             EEEccC--C----------ceeeccccCCC------ce-EeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC
Q psy10063        786 RYRDRK--N----------KATAGFLLSCP------DF-LFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  846 (894)
Q Consensus       786 iwd~~~--~----------~~~~~~~~~~~------~~-~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~  846 (894)
                      |+.-..  +          ..++....+|.      .+ -|.|...++++++..+    .|.||+.+++++|..++|...
T Consensus       362 LF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCG----hIFiW~K~t~eii~~MegDr~  437 (559)
T KOG1334|consen  362 LFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCG----HIFIWDKKTGEIIRFMEGDRH  437 (559)
T ss_pred             EeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccc----eEEEEecchhHHHHHhhcccc
Confidence            884221  1          11222122222      11 2677888888877766    699999999999999999888


Q ss_pred             CeeEEEEeeCCcEEEEecCCCcEEEEecCcccccccc
Q psy10063        847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      -|.||.=+|--.+||++|.|.-|+||.-.+.+.+...
T Consensus       438 VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~~~~  474 (559)
T KOG1334|consen  438 VVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERATEP  474 (559)
T ss_pred             eEeccCCCCCCchhhccCCccceeeecCCccccccCh
Confidence            9999999999999999999999999998655554443

>KOG0644|consensus

Probab=99.66  E-value=2.4e-16  Score=175.50  Aligned_cols=278  Identities=17%  Similarity=0.257  Sum_probs=198.6

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .|.||...|.|+.|...|++|++|++|..|+||..+++.++..+.||.+                         .|..++
T Consensus       185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~-------------------------ditdla  239 (1113)
T KOG0644|consen  185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSG-------------------------DITDLA  239 (1113)
T ss_pred             HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCcc-------------------------ccchhc
Confidence            6678999999999999999999999999999999999999999999998                         788888


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      .+...-++++++.|..|++|.+.++.++..+.+ .+.|.+|+|+|-.    +.+.+|.              +++||.+-
T Consensus       240 vs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt--------------~~~wd~r~  301 (1113)
T KOG0644|consen  240 VSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGT--------------CRIWDARL  301 (1113)
T ss_pred             cchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCc--------------eEeccccc
Confidence            888888899999999999999999999988775 6899999999964    5667776              66666651


Q ss_pred             cceEEE---cc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        563 EEEFAR---IK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       563 ~~~~~~---l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                      ...+..   ++ .....+.++.|...+..+++|+.|+.-..|.+....            +...+..++...+       
T Consensus       302 ~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~------------~~~~~lif~t~ss-------  362 (1113)
T KOG0644|consen  302 EPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA------------WRSNLLIFVTRSS-------  362 (1113)
T ss_pred             cccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhh------------hhccceEEEeccc-------
Confidence            111111   11 123467778888888899999999999888764321            1111111100000       


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                            +.          + .+.                                          ..             
T Consensus       363 ------d~----------~-~~~------------------------------------------~~-------------  370 (1113)
T KOG0644|consen  363 ------DL----------S-SIV------------------------------------------VT-------------  370 (1113)
T ss_pred             ------cc----------c-ccc------------------------------------------ee-------------
Confidence                  00          0 000                                          00             


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEE-EecCCCcEEEEEccCCceeec
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLA-LALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~La-tgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                ......+++|..       ..|....++.+|.+.++.|.++|-...++ +++.||.+.|||+-.+..++.
T Consensus       371 ----------ar~~~~~~vwnl-------~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~  433 (1113)
T KOG0644|consen  371 ----------ARNDHRLCVWNL-------YTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKH  433 (1113)
T ss_pred             ----------eeeeeEeeeeec-------ccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCccee
Confidence                      000011233322       23455567788999999999999866655 889999999999998888776


Q ss_pred             cccCCCce---EeecCCCeEEEEecCCCCceeEEEeecCCcc
Q psy10063        798 FLLSCPDF---LFDFDTTREVTTTSTKVGKFDARFYHLIFEE  836 (894)
Q Consensus       798 ~~~~~~~~---~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~  836 (894)
                      +..++..+   .||+||..+++.-..+    .++|.....++
T Consensus       434 y~~gh~kl~d~kFSqdgts~~lsd~hg----ql~i~g~gqs~  471 (1113)
T KOG0644|consen  434 YFIGHGKLVDGKFSQDGTSIALSDDHG----QLYILGTGQSK  471 (1113)
T ss_pred             eecccceeeccccCCCCceEecCCCCC----ceEEeccCCCc
Confidence            66666544   4999999887755544    47777654443

>KOG2394|consensus

Probab=99.65  E-value=1.6e-14  Score=154.40  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=101.9

Q ss_pred             CceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee---eccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063        761 DIGFKMPEPPKREKLALALADKVSERYRDRKNKAT---AGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE  837 (894)
Q Consensus       761 ~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~---~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~  837 (894)
                      +.|..++|+|||++||+.+.||.+|||+..+.+++   +.+..+.-.++|||||+++++++.|.    -|.||.+..+++
T Consensus       291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDD----LVtVwSf~erRV  366 (636)
T KOG2394|consen  291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDD----LVTVWSFEERRV  366 (636)
T ss_pred             ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcc----eEEEEEeccceE
Confidence            36788999999999999999999999999887763   45556677899999999999999997    499999999999


Q ss_pred             eeeccCCCCCeeEEEEee-------------------------------C----C-------------cEEEEecCCCcE
Q psy10063        838 FARIKGHFGPINSLAFHP-------------------------------D----G-------------KSYASGGEDGFV  869 (894)
Q Consensus       838 l~~l~gH~~~V~~l~fSp-------------------------------d----g-------------~~LaS~s~Dg~V  869 (894)
                      +++=+||..+|..|+|.|                               +    +             -+|.+.|.|-.+
T Consensus       367 VARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTql  446 (636)
T KOG2394|consen  367 VARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQL  446 (636)
T ss_pred             EEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceE
Confidence            999999999999999982                               1    1             257889999999


Q ss_pred             EEEecCcccccc
Q psy10063        870 RLHTFDQAYFDY  881 (894)
Q Consensus       870 ~vWdl~~~~~~~  881 (894)
                      +|||+..+.+..
T Consensus       447 cLWDlteD~L~~  458 (636)
T KOG2394|consen  447 CLWDLTEDVLVP  458 (636)
T ss_pred             EEEecchhhccc
Confidence            999999887665

>KOG1523|consensus

Probab=99.65  E-value=4.2e-14  Score=142.77  Aligned_cols=163  Identities=17%  Similarity=0.224  Sum_probs=131.7

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC---eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG---RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg---~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      +.--.+.|+|.+|++|+..+|.+-....|.||.....   +..++++.|..                         .|.+
T Consensus         6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~-------------------------~vtg   60 (361)
T KOG1523|consen    6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDK-------------------------IVTG   60 (361)
T ss_pred             eeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCc-------------------------ceeE
Confidence            3344689999999999999999998889999998654   45788888887                         7888


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEc-CCCcE---EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTT-HDRQL---LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl-~~~~~---~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      |+|.|...+|++|+.|..-+||.. ..++.   +..+++...+.++.|+|.+..|++|++.+.+.||+++.+..-|-   
T Consensus        61 vdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWV---  137 (361)
T KOG1523|consen   61 VDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWV---  137 (361)
T ss_pred             EeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceeh---
Confidence            999999999999999999999998 44443   34455678999999999999999999999877776665443210   


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                           .+.  .-+-+...|.+|+|+|..-+|+.|+.|+.+|||..
T Consensus       138 -----sKh--ikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa  175 (361)
T KOG1523|consen  138 -----SKH--IKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA  175 (361)
T ss_pred             -----hhh--hCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence                 011  11346778999999999999999999999999864

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.65  E-value=1.1e-13  Score=156.27  Aligned_cols=244  Identities=27%  Similarity=0.370  Sum_probs=188.2

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc-EEEEEeC-CC-CeeEEEE-cCCCC-EEEEEEC-CCCeEEEeccCccc
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ-LLKTYTT-ER-PVNSAAL-SPILP-HVVLGGG-QEAREVTTTSTKVG  551 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-~~~~~~~-~~-~v~~l~~-spdg~-~l~~~~~-~~~~~v~~~~~~~~  551 (894)
                      .|.++.|.+.+..++.++.|+.|.+|+...+. .+..+.. .. .+..+.+ .+++. .++..+. ++.           
T Consensus        67 ~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-----------  135 (466)
T COG2319          67 SITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGT-----------  135 (466)
T ss_pred             eEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCcc-----------
Confidence            68888898999999999999999999999887 6666655 32 6777777 88887 4444344 443           


Q ss_pred             eeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        552 KFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGE-DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       552 ~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                         +++|++.. ...+..+..|...|.+++|++++++++.++. |+.+++|++..+..                      
T Consensus       136 ---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  190 (466)
T COG2319         136 ---VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKP----------------------  190 (466)
T ss_pred             ---EEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCce----------------------
Confidence               88899887 7888888999999999999999999998886 99999999853110                      


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                                                                                                      
T Consensus       191 --------------------------------------------------------------------------------  190 (466)
T COG2319         191 --------------------------------------------------------------------------------  190 (466)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEEecCCCcEEEEE
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALALADKVSERYR  788 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs~Dg~I~iwd  788 (894)
                                                                 ...+.+|...|.+++|+|++. ++++++.|+.|++||
T Consensus       191 -------------------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd  227 (466)
T COG2319         191 -------------------------------------------LSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD  227 (466)
T ss_pred             -------------------------------------------EEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEE
Confidence                                                       001223667788999999988 555559999999998


Q ss_pred             ccCCceeeccccCCCce---EeecCCCeEEEEecCCCCceeEEEeecCCcce-eeeccCCCCCeeEEEEeeCCcEEEEec
Q psy10063        789 DRKNKATAGFLLSCPDF---LFDFDTTREVTTTSTKVGKFDARFYHLIFEEE-FARIKGHFGPINSLAFHPDGKSYASGG  864 (894)
Q Consensus       789 ~~~~~~~~~~~~~~~~~---~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~-l~~l~gH~~~V~~l~fSpdg~~LaS~s  864 (894)
                      ...+..+......+...   .|++++.++++++.++    .+++|++..... +..+.+|...|.++.|.|++..+++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  303 (466)
T COG2319         228 LSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDG----TIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGS  303 (466)
T ss_pred             CCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCC----cEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEee
Confidence            88666655323333322   7999998888777776    599999987664 555578999999999999999999999


Q ss_pred             CCCcEEEEecCccccccccc
Q psy10063        865 EDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       865 ~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .|+.+++|++..........
T Consensus       304 ~d~~~~~~~~~~~~~~~~~~  323 (466)
T COG2319         304 SDGTVRLWDLETGKLLSSLT  323 (466)
T ss_pred             CCCcEEEEEcCCCceEEEee
Confidence            99999999988776554443

>KOG1240|consensus

Probab=99.65  E-value=1.9e-14  Score=166.85  Aligned_cols=194  Identities=15%  Similarity=0.245  Sum_probs=146.4

Q ss_pred             CCeEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCCC-------eEEEEecCCCCCCeeEEEEcCCCCEEEE
Q psy10063        398 EPVVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRMG-------RELESISGHAKEPINDMQFSKDATMFIT  469 (894)
Q Consensus       398 ~~~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~tg-------~~~~~l~~h~~~~V~~v~~spdg~~la~  469 (894)
                      .+.++..|..|+..|..++.++.. .++++||.||+|+||++..-       +...++..... .+.++.+.+.+..+|+
T Consensus      1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~s-r~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGS-RVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred             cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCC-ceEEEEeccCCCeEEE
Confidence            346666888999999999998765 89999999999999998532       22233332333 8999999999999999


Q ss_pred             EeCCCCc--------------------------c-ceEEEEEec-CCC-EEEEEECCCCEEEEEcCCCcEEEEEeC---C
Q psy10063        470 ASHSQAV--------------------------E-PINDMQFSK-DAT-MFITASKDHTAKLFTTHDRQLLKTYTT---E  517 (894)
Q Consensus       470 ~~~d~~i--------------------------~-~V~~l~~sp-dg~-~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~  517 (894)
                      ++.||.+                          + .|...+|.. .+. .|+.+..-+.|..||++....+..++.   +
T Consensus      1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~h 1195 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRH 1195 (1431)
T ss_pred             EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccc
Confidence            9999987                          1 223333333 233 677777889999999998877776664   5


Q ss_pred             CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-CCCCCeEEEEEec---CCCEEEEEeC
Q psy10063        518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFGPINSLAFHP---DGKSYASGGE  593 (894)
Q Consensus       518 ~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-~h~~~V~~l~~sp---dg~~l~sgs~  593 (894)
                      +.|.+++.+|-+.+++.|...|.              +.+||++-+.++.... .+..++..+..++   ....+++++.
T Consensus      1196 G~vTSi~idp~~~WlviGts~G~--------------l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~ 1261 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQ--------------LVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGS 1261 (1431)
T ss_pred             cceeEEEecCCceEEEEecCCce--------------EEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecc
Confidence            88999999999999999999986              7888988887777653 3456777777665   3345555554


Q ss_pred             --CCcEEEEECCCCc
Q psy10063        594 --DGFLISNTLSNGL  606 (894)
Q Consensus       594 --Dg~I~vwdl~~~~  606 (894)
                        .+.|.+|++..+.
T Consensus      1262 ~~~nevs~wn~~~g~ 1276 (1431)
T KOG1240|consen 1262 SSNNEVSTWNMETGL 1276 (1431)
T ss_pred             cCCCceeeeecccCc
Confidence              6779999997763

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.65  E-value=3.8e-13  Score=148.79  Aligned_cols=157  Identities=10%  Similarity=0.096  Sum_probs=108.7

Q ss_pred             CCCCEEEEEEccCCCEEEEec-CCCcEEEEecC-CCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGH-AKGDICTWDLR-MGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs-~Dg~I~iWd~~-tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      +.+....++|+|++++|++++ .++.|.+|++. .|+.  +..+. ..+                         ....|+
T Consensus        33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~-------------------------~p~~i~   86 (330)
T PRK11028         33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPG-------------------------SPTHIS   86 (330)
T ss_pred             cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCC-------------------------CceEEE
Confidence            456788899999999887764 57889999986 3332  12111 111                         345678


Q ss_pred             EecCCCEEEEEEC-CCCEEEEEcCC-Cc---EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        484 FSKDATMFITASK-DHTAKLFTTHD-RQ---LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       484 ~spdg~~L~sgs~-Dg~V~iwdl~~-~~---~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      |+|+|++|++++. ++.|.+|++.. +.   .+..+.+.....+++|+|+|++|+++......             |++|
T Consensus        87 ~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~-------------v~v~  153 (330)
T PRK11028         87 TDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDR-------------IRLF  153 (330)
T ss_pred             ECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCE-------------EEEE
Confidence            8888888777764 78899999963 32   33334444567889999999999887765432             7888


Q ss_pred             eccccceEE-------EccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10063        559 HLIFEEEFA-------RIKGHFGPINSLAFHPDGKSYASGGE-DGFLISNTLSN  604 (894)
Q Consensus       559 d~~~~~~~~-------~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~  604 (894)
                      |+.....+.       .+. .......++|+|+|++|+++.+ ++.|.+|+++.
T Consensus       154 d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~  206 (330)
T PRK11028        154 TLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD  206 (330)
T ss_pred             EECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence            886533221       111 1234678999999999988876 89999999863

>KOG4378|consensus

Probab=99.65  E-value=2.2e-15  Score=159.14  Aligned_cols=200  Identities=16%  Similarity=0.261  Sum_probs=161.0

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--------------  476 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------------  476 (894)
                      .-.||+......|+++|+..+.|+|||++...+++.+++|.. .|.+|.+.-...|||+++..|.|              
T Consensus        81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~s-tvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f  159 (673)
T KOG4378|consen   81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQS-TVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTF  159 (673)
T ss_pred             hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcc-eeEEEEecCCcceeEEeccCCcEEEEecccCccccce
Confidence            334444445558999999999999999997777888999997 99999999999999999998877              


Q ss_pred             -----cceEEEEEecCCC-EEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEE-EEEECCCCeEEEecc
Q psy10063        477 -----EPINDMQFSKDAT-MFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHV-VLGGGQEAREVTTTS  547 (894)
Q Consensus       477 -----~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l-~~~~~~~~~~v~~~~  547 (894)
                           ..|+-+.|++..+ +|.+++.+|.|.+||+.....+..+.  |..+...|||+|....| ++.+.|..       
T Consensus       160 ~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkk-------  232 (673)
T KOG4378|consen  160 TIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKK-------  232 (673)
T ss_pred             ecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccce-------
Confidence                 4677899999655 56678899999999999888777664  56889999999987655 55555654       


Q ss_pred             CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEECcC
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQQPD  622 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~spd  622 (894)
                             |.+||....+....|. ...+...|+|+++|.+|+.|...|.|..||++..+..     .+...+.+++|.+.
T Consensus       233 -------i~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s  304 (673)
T KOG4378|consen  233 -------INIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPS  304 (673)
T ss_pred             -------EEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeec
Confidence                   8889988776666553 4568899999999999999999999999999876522     24556888888887


Q ss_pred             CcEE
Q psy10063        623 GLVY  626 (894)
Q Consensus       623 g~~l  626 (894)
                      ..++
T Consensus       305 ~tvl  308 (673)
T KOG4378|consen  305 PTVL  308 (673)
T ss_pred             ceee
Confidence            5333

>KOG1009|consensus

Probab=99.65  E-value=1.3e-14  Score=150.67  Aligned_cols=112  Identities=19%  Similarity=0.348  Sum_probs=96.8

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC----------------CeEEEEecCCCCCCeeEEEEcCCCCEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM----------------GRELESISGHAKEPINDMQFSKDATMF  467 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t----------------g~~~~~l~~h~~~~V~~v~~spdg~~l  467 (894)
                      .|..|...|.+|.|+|+|.+|++|+++|.|.||....                ....+.+.+|..               
T Consensus        60 ~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~---------------  124 (434)
T KOG1009|consen   60 SLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRD---------------  124 (434)
T ss_pred             cccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEeccccc---------------
Confidence            6788999999999999999999999999999998652                112233334433               


Q ss_pred             EEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        468 ITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       468 a~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                                .|+.++|++|+.+|++++.|..+++||+..|+++..+. |...|..++|.|-.+++++-+.++.
T Consensus       125 ----------diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~  188 (434)
T KOG1009|consen  125 ----------DIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRH  188 (434)
T ss_pred             ----------chhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcc
Confidence                      79999999999999999999999999999999998877 4688999999999999999988885

>KOG1310|consensus

Probab=99.64  E-value=6.1e-15  Score=157.53  Aligned_cols=192  Identities=17%  Similarity=0.300  Sum_probs=138.0

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec-CCCCCCeeEEEEcCC--CCEEEEEeCCCCc-
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS-GHAKEPINDMQFSKD--ATMFITASHSQAV-  476 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~-~h~~~~V~~v~~spd--g~~la~~~~d~~i-  476 (894)
                      +...|.||.+.|.||+|+.||.+|++|++|-.|.|||....|+++.+. +|.. .|.++.|-|.  .+.+++|..|..| 
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHta-NIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTA-NIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeeccccc-ceeEEeeeccCCCeEEEeccCcceEE
Confidence            445788999999999999999999999999999999999888888876 7777 9999999994  4667777777655 


Q ss_pred             ---------------------------cceEEEEEecCC-CEEEEEECCCCEEEEEcCCCc-------EEEEEe----CC
Q psy10063        477 ---------------------------EPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQ-------LLKTYT----TE  517 (894)
Q Consensus       477 ---------------------------~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~-------~~~~~~----~~  517 (894)
                                                 ..|..|+-.|++ ..|.++++||.|+-+|++...       +...+.    .-
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l  200 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL  200 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence                                       467778888887 789999999999999998622       111111    11


Q ss_pred             CCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccceeeEEEEeccc--------c----------ceEEEc-cCCC----
Q psy10063        518 RPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGKFDARFYHLIF--------E----------EEFARI-KGHF----  573 (894)
Q Consensus       518 ~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~--------~----------~~~~~l-~~h~----  573 (894)
                      -...|+.++|...+ |++|+.+-.              +++||.+.        +          .+++.+ .+|.    
T Consensus       201 ielk~ltisp~rp~~laVGgsdpf--------------arLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~  266 (758)
T KOG1310|consen  201 IELKCLTISPSRPYYLAVGGSDPF--------------ARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQ  266 (758)
T ss_pred             heeeeeeecCCCCceEEecCCCch--------------hhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcc
Confidence            35689999998765 555555554              44444210        0          112211 2222    


Q ss_pred             ----C---CeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        574 ----G---PINSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       574 ----~---~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                          .   .+..+.|+|+|.-|+..-..-.|+++|+..++.
T Consensus       267 gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  267 GNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKS  307 (758)
T ss_pred             cccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCC
Confidence                1   245678999987665554455799999987663

>KOG1963|consensus

Probab=99.63  E-value=2e-13  Score=154.87  Aligned_cols=349  Identities=14%  Similarity=0.120  Sum_probs=219.4

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +.|....-....||+|+++|+....+ .|.||...+|+++..+.+|.. ++..+.+.|...                   
T Consensus        12 lgg~n~~~~~avfSnD~k~l~~~~~~-~V~VyS~~Tg~~i~~l~~~~a-~l~s~~~~~~~~-------------------   70 (792)
T KOG1963|consen   12 LGGRNGNKSPAVFSNDAKFLFLCTGN-FVKVYSTATGECITSLEDHTA-PLTSVIVLPSSE-------------------   70 (792)
T ss_pred             eccccceecccccccCCcEEEEeeCC-EEEEEecchHhhhhhcccccC-ccceeeecCCCc-------------------
Confidence            33444444566799999999888754 899999999999999999998 444444433211                   


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC---CCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPI---LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spd---g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                        .-.++++++.||.|++||...+.+++.+....++.++.+.|.   -..++..+.+....+.....+... .++-+.+.
T Consensus        71 --~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~-q~~~~~~~  147 (792)
T KOG1963|consen   71 --NANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSK-QSSRFVLA  147 (792)
T ss_pred             --cceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeeccccccc-ceeeeEee
Confidence              114678999999999999999999999998887777776432   122333333322222111111100 01111111


Q ss_pred             cc--ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc--------cCCCceeeeEECcCCcEEEecCC
Q psy10063        562 FE--EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI--------SEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       562 ~~--~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~--------~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      +.  .....+.+|.. -.+|.+.+.|.+.+..- +..+.+|....+...        .+...+...+++|.+.+++.   
T Consensus       148 t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i~~-~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa---  222 (792)
T KOG1963|consen  148 TFDSAKGDFLKEHQE-PKSIVDNNSGEFKGIVH-MCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAA---  222 (792)
T ss_pred             eccccchhhhhhhcC-CccEEEcCCceEEEEEE-eeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEE---
Confidence            11  11111233333 45777887777655544 456888877653311        01111233444444444321   


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                          |.  .++.|.+|.+-..                                           
T Consensus       223 --------------------~d--~dGrI~vw~d~~~-------------------------------------------  237 (792)
T KOG1963|consen  223 --------------------GD--SDGRILVWRDFGS-------------------------------------------  237 (792)
T ss_pred             --------------------ec--cCCcEEEEecccc-------------------------------------------
Confidence                                11  2233333321100                                           


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                         ..+.....++.=|.+.|.+++|+++|.+|++|++.+.+.+|.+.+
T Consensus       238 -----------------------------------~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T  282 (792)
T KOG1963|consen  238 -----------------------------------SDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET  282 (792)
T ss_pred             -----------------------------------ccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence                                               001111223444888999999999999999999999999999887


Q ss_pred             Cce--eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-----------CCCCeeEEEEeeCCc
Q psy10063        792 NKA--TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-----------HFGPINSLAFHPDGK  858 (894)
Q Consensus       792 ~~~--~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-----------H~~~V~~l~fSpdg~  858 (894)
                      ++.  +.++...+..+++|+|+...++..+|.    .|.+......+....+.|           ..+-.+.+++.|--+
T Consensus       283 ~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DN----qI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~  358 (792)
T KOG1963|consen  283 GKKQFLPRLGSPILHIVVSPDSDLYSLVLEDN----QIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTN  358 (792)
T ss_pred             CCcccccccCCeeEEEEEcCCCCeEEEEecCc----eEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCC
Confidence            764  445556667888999999988888887    478777655444333332           233466788999777


Q ss_pred             EEEEecCCCcEEEEecCccccccccccC
Q psy10063        859 SYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       859 ~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      .++-.+.-|.|.+||+-....+++++..
T Consensus       359 ~~vln~~~g~vQ~ydl~td~~i~~~~v~  386 (792)
T KOG1963|consen  359 SLVLNGHPGHVQFYDLYTDSTIYKLQVC  386 (792)
T ss_pred             ceeecCCCceEEEEeccccceeeeEEEE
Confidence            8999999999999999999998888754

>KOG4328|consensus

Probab=99.63  E-value=1.9e-14  Score=151.42  Aligned_cols=243  Identities=15%  Similarity=0.091  Sum_probs=175.7

Q ss_pred             ceEEEEEecC--CCEEEEEECCCCEEEEEcCCCc----EEEEE-eCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCc
Q psy10063        478 PINDMQFSKD--ATMFITASKDHTAKLFTTHDRQ----LLKTY-TTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       478 ~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~----~~~~~-~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~  549 (894)
                      +|.+++|+|.  .++||+|+.-|.|-+||+...+    -+..+ .|..+|.+|.|+|.. .+|++.+.||.         
T Consensus       188 Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt---------  258 (498)
T KOG4328|consen  188 RITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT---------  258 (498)
T ss_pred             ceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce---------
Confidence            7888888883  3688899999999999995221    22333 356899999999965 57888999998         


Q ss_pred             cceeeEEEEeccccce--EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        550 VGKFDARFYHLIFEEE--FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                           ||+-|++....  +..+......+.++.|+.+.+.++.+..-|.+.+||++.+..                    
T Consensus       259 -----iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s--------------------  313 (498)
T KOG4328|consen  259 -----IRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS--------------------  313 (498)
T ss_pred             -----eeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc--------------------
Confidence                 67777765533  233333556778888988888888888778889998865421                    


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                                                                                                      
T Consensus       314 --------------------------------------------------------------------------------  313 (498)
T KOG4328|consen  314 --------------------------------------------------------------------------------  313 (498)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSER  786 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~i  786 (894)
                                                                  ....+..|...|..|++.|. ..+||+++-|++++|
T Consensus       314 --------------------------------------------~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kI  349 (498)
T KOG4328|consen  314 --------------------------------------------EYENLRLHKKKITSVALNPVCPWFLATASLDQTAKI  349 (498)
T ss_pred             --------------------------------------------cchhhhhhhcccceeecCCCCchheeecccCcceee
Confidence                                                        00112234556778888886 467889999999999


Q ss_pred             EEccCCceeec-------cccCCCceEeecCCCeEEEEecCCCCceeEEEeecC----CcceeeeccCCC----CC--ee
Q psy10063        787 YRDRKNKATAG-------FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI----FEEEFARIKGHF----GP--IN  849 (894)
Q Consensus       787 wd~~~~~~~~~-------~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~----tg~~l~~l~gH~----~~--V~  849 (894)
                      ||++.......       +...+.+..|||++..|++.+.|.    .|+|||..    .-..+..+. |.    ..  ..
T Consensus       350 WD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~----~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~f  424 (498)
T KOG4328|consen  350 WDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDN----EIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPF  424 (498)
T ss_pred             eehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCC----ceEEeecccccccCCccceee-ccCcccccccch
Confidence            99887655332       334566778999999999888887    69999984    222222222 21    22  23


Q ss_pred             EEEEeeCCcEEEEecCCCcEEEEecCcccccccc
Q psy10063        850 SLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      ..+|.||..++++|-.-..|-|++-..++++..+
T Consensus       425 KA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el  458 (498)
T KOG4328|consen  425 KAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCEL  458 (498)
T ss_pred             hheeCCCccEEEEeccCcceeEEcCCCCEEeeec
Confidence            4689999999999999999999999999876664

>KOG0771|consensus

Probab=99.62  E-value=5.8e-14  Score=147.13  Aligned_cols=72  Identities=22%  Similarity=0.248  Sum_probs=65.9

Q ss_pred             eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063        521 NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISN  600 (894)
Q Consensus       521 ~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw  600 (894)
                      .+++|+.+|..|++++.||.              +|+|++.....+.....|.+.|.+|.|+|||++|++.+.| ..+||
T Consensus       148 k~vaf~~~gs~latgg~dg~--------------lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW  212 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGT--------------LRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVW  212 (398)
T ss_pred             eEEEEcCCCCEeeeccccce--------------EEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEE
Confidence            88999999999999999997              8889887777777788899999999999999999999999 89999


Q ss_pred             ECCCCcc
Q psy10063        601 TLSNGLD  607 (894)
Q Consensus       601 dl~~~~~  607 (894)
                      +.+.+..
T Consensus       213 ~~~~g~~  219 (398)
T KOG0771|consen  213 SVNTGAA  219 (398)
T ss_pred             EeccCch
Confidence            9988743

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=2e-13  Score=155.61  Aligned_cols=218  Identities=10%  Similarity=0.038  Sum_probs=141.2

Q ss_pred             ceEEEEEecCCCEEEEEE---CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITAS---KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs---~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .+.+.+|+|||++|+..+   .+..|++||+..++........+.+..++|+|||++|++......           ..+
T Consensus       200 ~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g-----------~~~  268 (429)
T PRK03629        200 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG-----------SLN  268 (429)
T ss_pred             ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCC-----------CcE
Confidence            355555666666555443   235689999998876655545555668999999999987654221           124


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-CcEEEEE--CCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-GFLISNT--LSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D-g~I~vwd--l~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      |++||+..++..+ +..+...+..+.|+|||++|+..+.+ +...||.  +..++.                        
T Consensus       269 I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~------------------------  323 (429)
T PRK03629        269 LYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP------------------------  323 (429)
T ss_pred             EEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe------------------------
Confidence            8889998776554 44444567889999999988877653 4444443  221100                        


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                        ..+                                                                           
T Consensus       324 --~~l---------------------------------------------------------------------------  326 (429)
T PRK03629        324 --QRI---------------------------------------------------------------------------  326 (429)
T ss_pred             --EEe---------------------------------------------------------------------------
Confidence              000                                                                           


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC---CcEEEEE
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD---KVSERYR  788 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D---g~I~iwd  788 (894)
                                                                   ..+......++|+|||++|+..+.+   ..|++||
T Consensus       327 ---------------------------------------------t~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~d  361 (429)
T PRK03629        327 ---------------------------------------------TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD  361 (429)
T ss_pred             ---------------------------------------------ecCCCCccCEEECCCCCEEEEEEccCCCceEEEEE
Confidence                                                         0000112346678888888765443   3578888


Q ss_pred             ccCCceeecc-ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063        789 DRKNKATAGF-LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       789 ~~~~~~~~~~-~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      +..++...-. ........|+|||++++.++.++. ...++++++. |+....+.+|.+.+..++|+|
T Consensus       362 l~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~-~~~l~~~~~~-G~~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        362 LATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGM-GSVLNLVSTD-GRFKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             CCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCC-ceEEEEEECC-CCCeEECccCCCCcCCcccCC
Confidence            8766542211 112346789999999999988754 3358888985 666677888999999999997

>KOG2315|consensus

Probab=99.61  E-value=4.6e-13  Score=144.84  Aligned_cols=353  Identities=12%  Similarity=0.074  Sum_probs=206.1

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      .+...+++++|++++.+ .++.|+|++...+..+...... .++++.|+|.|.+|..--.-   .++.- ...+.-.+++
T Consensus        36 ~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~~~lt~~~~-~~~~L~fSP~g~yL~T~e~~---~i~~~-~~~~~pn~~v  109 (566)
T KOG2315|consen   36 PCNVFAYSNNGRLFAYS-DNQVVKVFEIATLKVVLCVELK-KTYDLLFSPKGNYLLTWEPW---AIYGP-KNASNPNVLV  109 (566)
T ss_pred             cceeEEEcCCCcEEEEE-cCCeEEEEEccCCcEEEEeccc-eeeeeeeccccccccccccc---ccccC-CCCCCCceee
Confidence            45567788888877765 5678999999988766665556 89999999999988753211   11111 1111234889


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc---CCCceeeeEECcCCcEEEecCCeEE
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS---EGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~---~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      |+++++.....+......-+++.|+.|..+ ++--..+.+++|++...+.+.   ..+.+..+.++|.+...     ++ 
T Consensus       110 ~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl-~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~-----~v-  182 (566)
T KOG2315|consen  110 YNVETGVQRSQIQKKMQNGWVPQFSIDESL-AARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPP-----FV-  182 (566)
T ss_pred             eeeccceehhheehhhhcCcccccccchhh-hhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCc-----eE-
Confidence            999986655555443333379999988753 322334679999987754321   23344445555542211     00 


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                                  ...+.+..+....+++|.......                       ...+..........-.+.+.+
T Consensus       183 ------------AvyvPe~kGaPa~vri~~~~~~~~-----------------------~~~~a~ksFFkadkvqm~WN~  227 (566)
T KOG2315|consen  183 ------------AVYVPEKKGAPASVRIYKYPEEGQ-----------------------HQPVANKSFFKADKVQMKWNK  227 (566)
T ss_pred             ------------EEEccCCCCCCcEEEEeccccccc-----------------------cchhhhccccccceeEEEecc
Confidence                        011222233344455544221100                       000011111112222244444


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE--ecCCCcEEEEEccCC
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL--ALADKVSERYRDRKN  792 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat--gs~Dg~I~iwd~~~~  792 (894)
                      .|.-|.+....   .++...--.+|...-..+..+|....+-....+.|.++.|+++++.+++  |-.-..+-|||++- 
T Consensus       228 ~gt~LLvLast---dVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-  303 (566)
T KOG2315|consen  228 LGTALLVLAST---DVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-  303 (566)
T ss_pred             CCceEEEEEEE---eecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-
Confidence            44433322111   1111111122222222333444444444445789999999999977764  66777899999764 


Q ss_pred             ceeeccccC-CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEec------C
Q psy10063        793 KATAGFLLS-CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG------E  865 (894)
Q Consensus       793 ~~~~~~~~~-~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s------~  865 (894)
                      ..+..+..+ -..+.|+|.|+.++.++-+.. ..+|.|||+...+++..+..-...  -+.|+|||++|+++.      .
T Consensus       304 ~~v~df~egpRN~~~fnp~g~ii~lAGFGNL-~G~mEvwDv~n~K~i~~~~a~~tt--~~eW~PdGe~flTATTaPRlrv  380 (566)
T KOG2315|consen  304 KPVFDFPEGPRNTAFFNPHGNIILLAGFGNL-PGDMEVWDVPNRKLIAKFKAANTT--VFEWSPDGEYFLTATTAPRLRV  380 (566)
T ss_pred             CEeEeCCCCCccceEECCCCCEEEEeecCCC-CCceEEEeccchhhccccccCCce--EEEEcCCCcEEEEEeccccEEe
Confidence            444444444 446779999999887766542 226999999999999988876544  489999999999876      5


Q ss_pred             CCcEEEEecCccccccccccC
Q psy10063        866 DGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       866 Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      |..++||++.+.. +++.+++
T Consensus       381 dNg~KiwhytG~~-l~~~~f~  400 (566)
T KOG2315|consen  381 DNGIKIWHYTGSL-LHEKMFK  400 (566)
T ss_pred             cCCeEEEEecCce-eehhhhh
Confidence            7889999997554 4443433

>KOG0303|consensus

Probab=99.61  E-value=3.6e-14  Score=146.61  Aligned_cols=205  Identities=15%  Similarity=0.196  Sum_probs=153.1

Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +|..++|+| +...||+||+|.+|.||++-.+.+.+.+                                          
T Consensus        83 ~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l------------------------------------------  120 (472)
T KOG0303|consen   83 PVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL------------------------------------------  120 (472)
T ss_pred             cccccccCccCCceeecCCCCceEEEEECCCcccccCc------------------------------------------
Confidence            777788887 5678999999999999998755433321                                          


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                            -+.+..|.||...|-.++|+|- ...|++++.|..|.+|++.+++.+                           
T Consensus       121 ------tepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeal---------------------------  167 (472)
T KOG0303|consen  121 ------TEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEAL---------------------------  167 (472)
T ss_pred             ------ccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCcee---------------------------
Confidence                  1345567899999999999995 457899999999999999776421                           


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (472)
T KOG0303|consen  168 --------------------------------------------------------------------------------  167 (472)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                             +...|.+.|+++.|+.||.+|++.+.|+.|||||.+.++.+
T Consensus       168 ---------------------------------------i~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v  208 (472)
T KOG0303|consen  168 ---------------------------------------ITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVV  208 (472)
T ss_pred             ---------------------------------------eecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEe
Confidence                                                   00127888999999999999999999999999999999987


Q ss_pred             eccccC----CCceEeecCCCeEEEEecCCCCceeEEEeecCCcce---eeeccCCCCCeeEEEEeeCCcEEEE-ecCCC
Q psy10063        796 AGFLLS----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE---FARIKGHFGPINSLAFHPDGKSYAS-GGEDG  867 (894)
Q Consensus       796 ~~~~~~----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~---l~~l~gH~~~V~~l~fSpdg~~LaS-~s~Dg  867 (894)
                      ..-..+    ...++|-.+|. +++.+-.+-..-+|-|||-..-+.   +..|. -+..|.---|.+|-.+|.. |-.|+
T Consensus       209 ~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~  286 (472)
T KOG0303|consen  209 SEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDS  286 (472)
T ss_pred             eecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCc
Confidence            655221    23567888998 555555444444699999765432   22332 3455666678888877655 45799


Q ss_pred             cEEEEecCccc
Q psy10063        868 FVRLHTFDQAY  878 (894)
Q Consensus       868 ~V~vWdl~~~~  878 (894)
                      .||.|.+....
T Consensus       287 ~IRYyEit~d~  297 (472)
T KOG0303|consen  287 SIRYFEITNEP  297 (472)
T ss_pred             ceEEEEecCCC
Confidence            99999998766

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=9.3e-14  Score=158.77  Aligned_cols=221  Identities=14%  Similarity=0.098  Sum_probs=145.6

Q ss_pred             CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEEccCCCC
Q psy10063        497 DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FARIKGHFG  574 (894)
Q Consensus       497 Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~l~~h~~  574 (894)
                      +..|+|||...........+...+.+++|+|||++|++++.++.           ...|++||+..++.  +..+.+|  
T Consensus       183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~-----------~~~i~i~dl~tg~~~~l~~~~g~--  249 (429)
T PRK01742        183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENK-----------KSQLVVHDLRSGARKVVASFRGH--  249 (429)
T ss_pred             eEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCC-----------CcEEEEEeCCCCceEEEecCCCc--
Confidence            46899999876554443445678999999999999998875432           11388999987754  3334444  


Q ss_pred             CeEEEEEecCCCEEEEEe-CCCcEEEEECC--CCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeee
Q psy10063        575 PINSLAFHPDGKSYASGG-EDGFLISNTLS--NGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFS  651 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~--~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~s  651 (894)
                       ..+++|+|||++|+.++ .+|.+.||.++  .++.                                            
T Consensus       250 -~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~--------------------------------------------  284 (429)
T PRK01742        250 -NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP--------------------------------------------  284 (429)
T ss_pred             -cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe--------------------------------------------
Confidence             34689999999888765 67776666432  1100                                            


Q ss_pred             ccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcccccc
Q psy10063        652 GSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVD  731 (894)
Q Consensus       652 gs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~  731 (894)
                                                                                                      
T Consensus       285 --------------------------------------------------------------------------------  284 (429)
T PRK01742        285 --------------------------------------------------------------------------------  284 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec-CCCcEEEEEccCCce-eeccccCCCceEeec
Q psy10063        732 ASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL-ADKVSERYRDRKNKA-TAGFLLSCPDFLFDF  809 (894)
Q Consensus       732 ~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs-~Dg~I~iwd~~~~~~-~~~~~~~~~~~~fS~  809 (894)
                                            ..+..+...+..++|+|||++|+..+ .++.++||++..... ...+........|+|
T Consensus       285 ----------------------~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~~~~~~Sp  342 (429)
T PRK01742        285 ----------------------SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRGYSAQISA  342 (429)
T ss_pred             ----------------------EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCCCCccCCC
Confidence                                  00011222345678899999877554 678888887643211 111111113567999


Q ss_pred             CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC--ccccccccc
Q psy10063        810 DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD--QAYFDYTFD  884 (894)
Q Consensus       810 dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~--~~~~~~~~~  884 (894)
                      ||+++++++.+     .|.+||+.+++.......+  ...+++|+|||++|+.++.||.+++|.+.  .+..+..+.
T Consensus       343 DG~~ia~~~~~-----~i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~  412 (429)
T PRK01742        343 DGKTLVMINGD-----NVVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP  412 (429)
T ss_pred             CCCEEEEEcCC-----CEEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence            99999888764     3788999988765333332  34578899999999999999988888763  344555543

>KOG1007|consensus

Probab=99.60  E-value=3.3e-14  Score=141.27  Aligned_cols=162  Identities=15%  Similarity=0.271  Sum_probs=126.6

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE-EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE-LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~-~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      .|-+.|.||.|.|++..|++-. |..|.+|+++.+.. +..+.....         ..+           .....+-+|+
T Consensus       121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s---------~e~-----------~~~ftsg~Ws  179 (370)
T KOG1007|consen  121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSES---------AEM-----------RHSFTSGAWS  179 (370)
T ss_pred             HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeeccccc---------ccc-----------cceecccccC
Confidence            4667999999999999999886 77999999988765 444432211         000           0156677888


Q ss_pred             c--CCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        486 K--DATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       486 p--dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      |  ||..|++. .|+.++.||+++.++...+.  |...|..+.|.|.-+++++.++|...             ||+||.+
T Consensus       180 pHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgy-------------vriWD~R  245 (370)
T KOG1007|consen  180 PHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGY-------------VRIWDTR  245 (370)
T ss_pred             CCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCcc-------------EEEEecc
Confidence            8  78877776 58999999999998887776  56789999999998876665555542             9999987


Q ss_pred             c-cceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECC
Q psy10063        562 F-EEEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       562 ~-~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~  603 (894)
                      . ..++..+.+|..+|+++.|.|. .++|++|+.|..|.+|-..
T Consensus       246 ~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~  289 (370)
T KOG1007|consen  246 KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS  289 (370)
T ss_pred             CCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence            5 4578889999999999999985 4678899999999998653

>KOG2394|consensus

Probab=99.59  E-value=1.3e-14  Score=155.23  Aligned_cols=146  Identities=21%  Similarity=0.367  Sum_probs=114.4

Q ss_pred             CCCEEEEEEccCCC-EEEEecCCCcEEEEecCC--------------CeEEEEe--cCCCC-CCeeEEEEcCCCCEEEEE
Q psy10063        409 SAKITSLLWGNLDQ-YIITGHAKGDICTWDLRM--------------GRELESI--SGHAK-EPINDMQFSKDATMFITA  470 (894)
Q Consensus       409 ~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~t--------------g~~~~~l--~~h~~-~~V~~v~~spdg~~la~~  470 (894)
                      +..|+|+.|-|-++ +++.+-.+|.+++||..-              +.....+  +.+.. .+|...+|+.        
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~--------  290 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGE--------  290 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecc--------
Confidence            47899999999544 555566789999998621              1111111  11111 1333333333        


Q ss_pred             eCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        471 SHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       471 ~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                            +.|..++|+|||++||+.+.||.+||||..+.+++..++. -+...|++|||||++|++|+.|+.         
T Consensus       291 ------g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDL---------  355 (636)
T KOG2394|consen  291 ------GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDL---------  355 (636)
T ss_pred             ------ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcce---------
Confidence                  2689999999999999999999999999999998888775 578999999999999999999996         


Q ss_pred             cceeeEEEEeccccceEEEccCCCCCeEEEEEe
Q psy10063        550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  582 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s  582 (894)
                           |.||.+..++.+..-+||..+|..|+|+
T Consensus       356 -----VtVwSf~erRVVARGqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  356 -----VTVWSFEERRVVARGQGHKSWVSVVAFD  383 (636)
T ss_pred             -----EEEEEeccceEEEeccccccceeeEeec
Confidence                 8889999999999999999999999998

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=4.4e-13  Score=152.96  Aligned_cols=220  Identities=13%  Similarity=-0.021  Sum_probs=142.7

Q ss_pred             ceEEEEEecCCCEEEEEECC---CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKD---HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D---g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~~  553 (894)
                      .+.+.+|+|||++|+..+.+   ..|++||+..++........+.+.+++|+|||+.|++.. .++..            
T Consensus       197 ~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~------------  264 (427)
T PRK02889        197 PIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNS------------  264 (427)
T ss_pred             CcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCc------------
Confidence            45666777777777666533   359999999988765544556677899999999988654 44432            


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE-DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                      +|.++|+..+. +..+..|.+.+..+.|+|||++|+..+. +|...||.++...                        +.
T Consensus       265 ~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~------------------------g~  319 (427)
T PRK02889        265 QIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG------------------------GA  319 (427)
T ss_pred             eEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC------------------------Cc
Confidence            35556665444 4556556666678899999998886654 4555666442100                        00


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                      ...+.                                                                           
T Consensus       320 ~~~lt---------------------------------------------------------------------------  324 (427)
T PRK02889        320 AQRVT---------------------------------------------------------------------------  324 (427)
T ss_pred             eEEEe---------------------------------------------------------------------------
Confidence            00000                                                                           


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC---cEEEEEc
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK---VSERYRD  789 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg---~I~iwd~  789 (894)
                                                                 .  +.......+|+|||++|+..+.++   .|++||+
T Consensus       325 -------------------------------------------~--~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~  359 (427)
T PRK02889        325 -------------------------------------------F--TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDL  359 (427)
T ss_pred             -------------------------------------------c--CCCCcCceEECCCCCEEEEEEccCCcEEEEEEEC
Confidence                                                       0  000112356889999988766554   5999998


Q ss_pred             cCCceeeccc-cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeC
Q psy10063        790 RKNKATAGFL-LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       790 ~~~~~~~~~~-~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd  856 (894)
                      ..++...-.. .....+.|+|||+.|+.+..++. ...+++.++. |+....+..+.+.+...+|+|-
T Consensus       360 ~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g-~~~l~~~~~~-g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        360 ATGQVTALTDTTRDESPSFAPNGRYILYATQQGG-RSVLAAVSSD-GRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             CCCCeEEccCCCCccCceECCCCCEEEEEEecCC-CEEEEEEECC-CCceEEeecCCCCCCCCccCCC
Confidence            7765432211 22356789999999999887653 3357888884 6666777778888888999873

>KOG0290|consensus

Probab=99.57  E-value=2.1e-13  Score=135.80  Aligned_cols=120  Identities=13%  Similarity=0.134  Sum_probs=92.8

Q ss_pred             cCCCCceEEEeeCCCC-CEEEEecCCCcEEEEEccCCceeeccccC----CC--ceEeec-CCCeEEEEecCCCCceeEE
Q psy10063        757 AGPVDIGFKMPEPPKR-EKLALALADKVSERYRDRKNKATAGFLLS----CP--DFLFDF-DTTREVTTTSTKVGKFDAR  828 (894)
Q Consensus       757 ~~h~~~v~~la~spdg-~~Latgs~Dg~I~iwd~~~~~~~~~~~~~----~~--~~~fS~-dg~~l~~as~d~~g~~~I~  828 (894)
                      -.|...|+.|+|...+ ..||+.+.||.+|+||++..+-..-+...    ..  +++|.. |..++++...+..   +|.
T Consensus       193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~---~V~  269 (364)
T KOG0290|consen  193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSN---KVV  269 (364)
T ss_pred             EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCc---eEE
Confidence            3477788999998864 57889999999999999887653322221    11  334444 5667887777765   699


Q ss_pred             EeecCC-cceeeeccCCCCCeeEEEEeeCC-cEEEEecCCCcEEEEecCcccc
Q psy10063        829 FYHLIF-EEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       829 vwd~~t-g~~l~~l~gH~~~V~~l~fSpdg-~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      |.|++. +..+.+|++|.+.|..|+|.|.. ..|++||+|..+.|||+.+-..
T Consensus       270 iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~  322 (364)
T KOG0290|consen  270 ILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPR  322 (364)
T ss_pred             EEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccc
Confidence            999975 46788999999999999999975 6899999999999999976543

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=5.5e-13  Score=152.68  Aligned_cols=238  Identities=16%  Similarity=0.062  Sum_probs=153.4

Q ss_pred             CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC---CCCEEEEEcCC
Q psy10063        431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK---DHTAKLFTTHD  507 (894)
Q Consensus       431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~---Dg~V~iwdl~~  507 (894)
                      ..|.|||.. +...+.+..+..                         .+.+.+|+|||++|+.++.   +..|++||+..
T Consensus       184 ~~l~i~D~~-g~~~~~lt~~~~-------------------------~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~  237 (433)
T PRK04922        184 YALQVADSD-GYNPQTILRSAE-------------------------PILSPAWSPDGKKLAYVSFERGRSAIYVQDLAT  237 (433)
T ss_pred             EEEEEECCC-CCCceEeecCCC-------------------------ccccccCCCCCCEEEEEecCCCCcEEEEEECCC
Confidence            358889876 444445555554                         4556666666666666553   34699999998


Q ss_pred             CcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC
Q psy10063        508 RQLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK  586 (894)
Q Consensus       508 ~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~  586 (894)
                      ++........+...+++|+|||++|++.. .++.            .+|++||+..++. ..+..|......++|+|||+
T Consensus       238 g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~------------~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~  304 (433)
T PRK04922        238 GQRELVASFRGINGAPSFSPDGRRLALTLSRDGN------------PEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGK  304 (433)
T ss_pred             CCEEEeccCCCCccCceECCCCCEEEEEEeCCCC------------ceEEEEECCCCCe-EECccCCCCccceEECCCCC
Confidence            87765544455566899999999887654 3332            2488999987764 45656666667889999999


Q ss_pred             EEEEEeC-CCc--EEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEe
Q psy10063        587 SYASGGE-DGF--LISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELT  663 (894)
Q Consensus       587 ~l~sgs~-Dg~--I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~  663 (894)
                      +|+.++. +|.  |+++++..++.                          ..+                           
T Consensus       305 ~l~f~sd~~g~~~iy~~dl~~g~~--------------------------~~l---------------------------  331 (433)
T PRK04922        305 SIYFTSDRGGRPQIYRVAASGGSA--------------------------ERL---------------------------  331 (433)
T ss_pred             EEEEEECCCCCceEEEEECCCCCe--------------------------EEe---------------------------
Confidence            8887763 344  33333322110                          000                           


Q ss_pred             chhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccC
Q psy10063        664 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEG  743 (894)
Q Consensus       664 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g  743 (894)
                                                                                                      
T Consensus       332 --------------------------------------------------------------------------------  331 (433)
T PRK04922        332 --------------------------------------------------------------------------------  331 (433)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC---cEEEEEccCCceeecc-ccCCCceEeecCCCeEEEEec
Q psy10063        744 TPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK---VSERYRDRKNKATAGF-LLSCPDFLFDFDTTREVTTTS  819 (894)
Q Consensus       744 ~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg---~I~iwd~~~~~~~~~~-~~~~~~~~fS~dg~~l~~as~  819 (894)
                                   ..+......++|+|||++|+..+.++   .|++|++..++...-. ........|++||++++..+.
T Consensus       332 -------------t~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~spdG~~i~~~s~  398 (433)
T PRK04922        332 -------------TFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAPNGSMVLYATR  398 (433)
T ss_pred             -------------ecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCCCCCCCceECCCCCEEEEEEe
Confidence                         00001122467889999888765433   5899998776643211 112345689999999988877


Q ss_pred             CCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063        820 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       820 d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      .+ +...|+++++. |.....+..+.+.+..++|+|
T Consensus       399 ~~-g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        399 EG-GRGVLAAVSTD-GRVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             cC-CceEEEEEECC-CCceEEcccCCCCCCCCccCC
Confidence            63 33468999986 455666777777888889986

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=1.6e-12  Score=149.02  Aligned_cols=133  Identities=16%  Similarity=0.097  Sum_probs=90.7

Q ss_pred             cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC---CCCEEEEEcCCC
Q psy10063        432 DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK---DHTAKLFTTHDR  508 (894)
Q Consensus       432 ~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~---Dg~V~iwdl~~~  508 (894)
                      .|.+||.+ |...+.+..|..                         .+.+.+|+|||++|+..+.   +..|++||+..+
T Consensus       183 ~l~~~d~d-g~~~~~lt~~~~-------------------------~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g  236 (435)
T PRK05137        183 RLAIMDQD-GANVRYLTDGSS-------------------------LVLTPRFSPNRQEITYMSYANGRPRVYLLDLETG  236 (435)
T ss_pred             EEEEECCC-CCCcEEEecCCC-------------------------CeEeeEECCCCCEEEEEEecCCCCEEEEEECCCC
Confidence            68888875 444555555655                         4555666666666665543   467999999988


Q ss_pred             cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEE
Q psy10063        509 QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY  588 (894)
Q Consensus       509 ~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l  588 (894)
                      +........+.+.+.+|+|||+.|++....+.           ..+|.+||+..++. ..+..+.+.....+|+|||++|
T Consensus       237 ~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g-----------~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i  304 (435)
T PRK05137        237 QRELVGNFPGMTFAPRFSPDGRKVVMSLSQGG-----------NTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQI  304 (435)
T ss_pred             cEEEeecCCCcccCcEECCCCCEEEEEEecCC-----------CceEEEEECCCCce-EEccCCCCccCceeEcCCCCEE
Confidence            87655555677889999999999876543221           12477888887655 4566666667789999999988


Q ss_pred             EEEeC-CC--cEEEEEC
Q psy10063        589 ASGGE-DG--FLISNTL  602 (894)
Q Consensus       589 ~sgs~-Dg--~I~vwdl  602 (894)
                      +..+. +|  .|++|++
T Consensus       305 ~f~s~~~g~~~Iy~~d~  321 (435)
T PRK05137        305 VFESDRSGSPQLYVMNA  321 (435)
T ss_pred             EEEECCCCCCeEEEEEC
Confidence            87663 33  3555554

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.55  E-value=1.1e-12  Score=140.11  Aligned_cols=348  Identities=13%  Similarity=0.089  Sum_probs=213.1

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ..-.|..++|||.|.+|++.... .|.+|+-..+..+..+. |.  .|..+.|+|.++||.+.++...+.  -...++|-
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~~--~V~~~~fSP~~kYL~tw~~~pi~~--pe~e~sp~  104 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR-HP--DVKYLDFSPNEKYLVTWSREPIIE--PEIEISPF  104 (561)
T ss_pred             cCcchhheeecCcchheehhhcc-ceEEccccchhheeeee-cC--CceecccCcccceeeeeccCCccC--hhhccCCc
Confidence            55678999999999999998765 59999977766555554 43  699999999999999998875431  12222332


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CC--ee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTE-RP--VN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~--v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                            . .+..+.|||+.+|.++..+... .+  .+ -+.|+-+.++++-..++.               +.|+++ ++
T Consensus       105 ------~-~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~s---------------l~i~e~-t~  161 (561)
T COG5354         105 ------T-SKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSS---------------LYIHEI-TD  161 (561)
T ss_pred             ------c-ccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCe---------------EEEEec-CC
Confidence                  1 2337999999999999998863 22  33 688999888877665444               677775 22


Q ss_pred             ce-EEEccC-CCCCeEEEEEecCCC--EEEE-----EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        564 EE-FARIKG-HFGPINSLAFHPDGK--SYAS-----GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       564 ~~-~~~l~~-h~~~V~~l~~spdg~--~l~s-----gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      .. ...++. ....|....|+|.|.  .|+.     .+.++.+++|.+.....+..             +-+...++...
T Consensus       162 n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~t-------------k~lfk~~~~qL  228 (561)
T COG5354         162 NIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVT-------------KNLFKVSGVQL  228 (561)
T ss_pred             ccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeee-------------eeeEeecccEE
Confidence            21 111111 124677888888643  2332     24455666666543221110             00011111111


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                      .|.                                                                            .
T Consensus       229 kW~----------------------------------------------------------------------------~  232 (561)
T COG5354         229 KWQ----------------------------------------------------------------------------V  232 (561)
T ss_pred             EEe----------------------------------------------------------------------------c
Confidence            111                                                                            1


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe--cCCCcEEEEEccCC
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA--LADKVSERYRDRKN  792 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg--s~Dg~I~iwd~~~~  792 (894)
                      .|..+.+...... .   +.--.+|...-.++++.++.+++..+-.+.|..++|.|+++.+++.  -.+..+.++|++..
T Consensus       233 ~g~~ll~l~~t~~-k---snKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N  308 (561)
T COG5354         233 LGKYLLVLVMTHT-K---SNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN  308 (561)
T ss_pred             CCceEEEEEEEee-e---cccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc
Confidence            1111111100000 0   0000111111122334445555555667889999999998887754  57888999998876


Q ss_pred             ceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee-eccCCCCCeeEEEEeeCCcEEEEec------C
Q psy10063        793 KATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGG------E  865 (894)
Q Consensus       793 ~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~-~l~gH~~~V~~l~fSpdg~~LaS~s------~  865 (894)
                      -........-..+.|+|.++++++++-+... ..|.+||.....++. .+.+-.  ...+.|+|||+++.+.-      .
T Consensus       309 l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~-gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~  385 (561)
T COG5354         309 LRFYFPEQKRNTIFFSPHERYILFAGFDNLQ-GNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRV  385 (561)
T ss_pred             eEEecCCcccccccccCcccEEEEecCCccc-cceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCccccc
Confidence            4333334445578899999999887766432 269999998664443 565543  34578999999887753      6


Q ss_pred             CCcEEEEecCccccc
Q psy10063        866 DGFVRLHTFDQAYFD  880 (894)
Q Consensus       866 Dg~V~vWdl~~~~~~  880 (894)
                      |..|.||++.+....
T Consensus       386 Dn~i~l~~v~g~~~f  400 (561)
T COG5354         386 DNSIKLWDVYGAKVF  400 (561)
T ss_pred             CcceEEEEecCchhh
Confidence            788999999876554

>KOG0644|consensus

Probab=99.53  E-value=1.9e-14  Score=160.55  Aligned_cols=278  Identities=15%  Similarity=0.173  Sum_probs=183.1

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|+|+.|...|.+|++|+.|..|+||..+++.++..+.+ .+.+..++.+...-++++++.|..              |+
T Consensus       192 aVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~v--------------Ir  257 (1113)
T KOG0644|consen  192 AVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKV--------------IR  257 (1113)
T ss_pred             heeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCce--------------EE
Confidence            799999999999999999999999999999999998886 589999999998888888888775              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +|.+..+.++..|.||.+.|++|+|+|-.    +.+.||.+++||.+-...+          +.|.-..+. .+..+..+
T Consensus       258 vWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~----------y~prp~~~~-~~~~~~s~  322 (1113)
T KOG0644|consen  258 VWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRI----------YVPRPLKFT-EKDLVDSI  322 (1113)
T ss_pred             EEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccc----------cCCCCCCcc-cccceeee
Confidence            99999999999999999999999999954    7788999999998721110          111000000 00000000


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                      .+.    ..+....+++  .+.....|.                                                    
T Consensus       323 ~~~----~~~~~f~Tgs--~d~ea~n~e----------------------------------------------------  344 (1113)
T KOG0644|consen  323 LFE----NNGDRFLTGS--RDGEARNHE----------------------------------------------------  344 (1113)
T ss_pred             ecc----cccccccccc--CCcccccch----------------------------------------------------
Confidence            000    0001111111  011100000                                                    


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCcee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                      ..+..|                    +...+.-+.++.| ..+.+++-.+..+++|++..++++
T Consensus       345 ----------------~~~l~~--------------------~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~  388 (1113)
T KOG0644|consen  345 ----------------FEQLAW--------------------RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLL  388 (1113)
T ss_pred             ----------------hhHhhh--------------------hccceEEEeccccccccceeeeeeeEeeeeecccchhh
Confidence                            000111                    1111111111112 245666777788999998888663


Q ss_pred             ---eccccCCCceEeecCCCeEE-EEecCCCCceeEEEeecCCcceeeecc-CCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        796 ---AGFLLSCPDFLFDFDTTREV-TTTSTKVGKFDARFYHLIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       796 ---~~~~~~~~~~~fS~dg~~l~-~as~d~~g~~~I~vwd~~tg~~l~~l~-gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                         ..+......+.++|-..+++ .++.|+    .+.|||+..|..++.+. +| +.+...+||+||..++....-|.++
T Consensus       389 H~l~ghsd~~yvLd~Hpfn~ri~msag~dg----st~iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~  463 (1113)
T KOG0644|consen  389 HNLMGHSDEVYVLDVHPFNPRIAMSAGYDG----STIIWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLY  463 (1113)
T ss_pred             hhhcccccceeeeeecCCCcHhhhhccCCC----ceEeeecccCCcceeeeccc-ceeeccccCCCCceEecCCCCCceE
Confidence               34455555666777555544 445555    58999999997776554 55 5566889999999999998889999


Q ss_pred             EEecCcccccccc
Q psy10063        871 LHTFDQAYFDYTF  883 (894)
Q Consensus       871 vWdl~~~~~~~~~  883 (894)
                      |.....++-..+.
T Consensus       464 i~g~gqs~s~k~a  476 (1113)
T KOG0644|consen  464 ILGTGQSKSQKKA  476 (1113)
T ss_pred             EeccCCCcccccc
Confidence            9987766544443

>KOG0771|consensus

Probab=99.53  E-value=8.3e-14  Score=146.02  Aligned_cols=177  Identities=19%  Similarity=0.255  Sum_probs=139.0

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----------------
Q psy10063        413 TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----------------  476 (894)
Q Consensus       413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----------------  476 (894)
                      .+++|+.+|..|++|+.||.+|||++.+...+..+..|++ .|.++.|+|||++|++.+.+...                
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~-eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHA-EVKDLDFSPDGKFLASIGADSARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcC-ccccceeCCCCcEEEEecCCceEEEEeccCchhhhcCCc
Confidence            7899999999999999999999999888888888888888 99999999999999999887322                


Q ss_pred             ---cceEEEEEecCC---C--EEEEEECCCCEEEEEcCCC------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063        477 ---EPINDMQFSKDA---T--MFITASKDHTAKLFTTHDR------QLLKTYTTERPVNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       477 ---~~V~~l~~spdg---~--~L~sgs~Dg~V~iwdl~~~------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                         ..+..+.|+.|+   .  +++.-..-+.|+.||+...      +..+.+.....|.+++.+++|+++++|+.+|.  
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGs--  304 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGS--  304 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCc--
Confidence               234455666655   2  2233334466777766422      22222334568999999999999999999997  


Q ss_pred             EEeccCccceeeEEEEeccccceEEEc-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                                  |.+++..+-+.++.+ +.|...|+.|.|+||.+++++.+.|..+.|..+..
T Consensus       305 ------------Vai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  305 ------------VAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             ------------EEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence                        677777766666655 46999999999999999999999999998887754

>KOG0649|consensus

Probab=99.53  E-value=9.2e-13  Score=128.09  Aligned_cols=240  Identities=13%  Similarity=0.110  Sum_probs=164.3

Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCC---------CcE-EEE-EeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHD---------RQL-LKT-YTTERPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---------~~~-~~~-~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                      |.+-+|+|.+++|+.|..+|.|.|+.+.+         |+. +.. -.|+++++.++|.  ..+|++++ +|.++-|.+.
T Consensus        13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~   89 (325)
T KOG0649|consen   13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWN   89 (325)
T ss_pred             HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeeeh
Confidence            45567888888999999999999988753         222 222 2367899999998  34555554 5876666554


Q ss_pred             Cccc-eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEE
Q psy10063        548 TKVG-KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       548 ~~~~-~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l  626 (894)
                      .... ...-++|.++......  ...--.|.++.+.|...-|+.++.|+.++.||++.++.                   
T Consensus        90 E~~es~~~K~lwe~~~P~~~~--~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i-------------------  148 (325)
T KOG0649|consen   90 EEEESLATKRLWEVKIPMQVD--AVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRI-------------------  148 (325)
T ss_pred             hhhhhccchhhhhhcCccccC--cccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEE-------------------
Confidence            3322 1112334333211111  11234688899998877777777999999999976531                   


Q ss_pred             EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE
Q psy10063        627 PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA  706 (894)
Q Consensus       627 ~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~  706 (894)
                                                                                                      
T Consensus       149 --------------------------------------------------------------------------------  148 (325)
T KOG0649|consen  149 --------------------------------------------------------------------------------  148 (325)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEE
Q psy10063        707 RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSER  786 (894)
Q Consensus       707 ~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~i  786 (894)
                                                                    .+.++||.+.|.+++.-.....+++|+.||++||
T Consensus       149 ----------------------------------------------~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRv  182 (325)
T KOG0649|consen  149 ----------------------------------------------QREYRGHTDYVHSVVGRNANGQILSGAEDGTVRV  182 (325)
T ss_pred             ----------------------------------------------EEEEcCCcceeeeeeecccCcceeecCCCccEEE
Confidence                                                          1245678888888887666678999999999999


Q ss_pred             EEccCCceeeccccC---------CC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063        787 YRDRKNKATAGFLLS---------CP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       787 wd~~~~~~~~~~~~~---------~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      ||.++.+.+..+...         ..  ..++.-+..+|+++++-+     +.||.+...++...+. -..+|..+.|- 
T Consensus       183 Wd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgGp~-----lslwhLrsse~t~vfp-ipa~v~~v~F~-  255 (325)
T KOG0649|consen  183 WDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGGPK-----LSLWHLRSSESTCVFP-IPARVHLVDFV-  255 (325)
T ss_pred             EeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecCCCc-----eeEEeccCCCceEEEe-cccceeEeeee-
Confidence            999999886544321         11  245677888888887775     8999999888776553 23447777886 


Q ss_pred             CCcEEEEecCCCcEEEEecCc
Q psy10063        856 DGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       856 dg~~LaS~s~Dg~V~vWdl~~  876 (894)
                       .+.++++|+...|.-|.+.+
T Consensus       256 -~d~vl~~G~g~~v~~~~l~G  275 (325)
T KOG0649|consen  256 -DDCVLIGGEGNHVQSYTLNG  275 (325)
T ss_pred             -cceEEEeccccceeeeeecc
Confidence             45688888888899898864

>KOG1272|consensus

Probab=99.53  E-value=5.2e-14  Score=148.21  Aligned_cols=269  Identities=12%  Similarity=0.118  Sum_probs=204.1

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      ...-..+.|+.+|++|+.|+..|.|..+|..++++..++....                          .|.++.|-...
T Consensus       129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~E--------------------------tv~Dv~~LHne  182 (545)
T KOG1272|consen  129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVME--------------------------TVRDVTFLHNE  182 (545)
T ss_pred             ccCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehhh--------------------------hhhhhhhhcch
Confidence            3445678999999999999999999999999999999888765                          36667776666


Q ss_pred             CEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        489 TMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      ++||++ ....++||| ..|..++.++...+|..|.|.|-.-+|++++..|.              ++.-|+..|+.+..
T Consensus       183 q~~AVA-QK~y~yvYD-~~GtElHClk~~~~v~rLeFLPyHfLL~~~~~~G~--------------L~Y~DVS~GklVa~  246 (545)
T KOG1272|consen  183 QFFAVA-QKKYVYVYD-NNGTELHCLKRHIRVARLEFLPYHFLLVAASEAGF--------------LKYQDVSTGKLVAS  246 (545)
T ss_pred             HHHHhh-hhceEEEec-CCCcEEeehhhcCchhhhcccchhheeeecccCCc--------------eEEEeechhhhhHH
Confidence            655554 567899998 56888888888899999999998777777777775              78889999999999


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCe
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGG  648 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~  648 (894)
                      +..-.+.+..++-.|-...|-.|...|+|.+|.....+.+                                        
T Consensus       247 ~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePL----------------------------------------  286 (545)
T KOG1272|consen  247 IRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPL----------------------------------------  286 (545)
T ss_pred             HHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchH----------------------------------------
Confidence            8888888999999998888999999999999976543211                                        


Q ss_pred             eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063        649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  728 (894)
Q Consensus       649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~  728 (894)
                                                                                                      
T Consensus       287 --------------------------------------------------------------------------------  286 (545)
T KOG1272|consen  287 --------------------------------------------------------------------------------  286 (545)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCC--ceE
Q psy10063        729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP--DFL  806 (894)
Q Consensus       729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~--~~~  806 (894)
                                               ..+..|.+.|.+|++.++|.|+|+.+.|..|+|||++....+..+...+.  .+.
T Consensus       287 -------------------------vKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls  341 (545)
T KOG1272|consen  287 -------------------------VKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLS  341 (545)
T ss_pred             -------------------------HHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccc
Confidence                                     01224778899999999999999999999999999999888776655443  444


Q ss_pred             eecCCCeEEEEecCCCCceeEEEeecCCc---ceeeeccCC--CCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        807 FDFDTTREVTTTSTKVGKFDARFYHLIFE---EEFARIKGH--FGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       807 fS~dg~~l~~as~d~~g~~~I~vwd~~tg---~~l~~l~gH--~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      ||.-|- |+++.++     .|.||.-..+   ..-..+..|  .+.|..|.|+|-...|-.|-..|.-.
T Consensus       342 ~Sqkgl-LA~~~G~-----~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~ts  404 (545)
T KOG1272|consen  342 LSQKGL-LALSYGD-----HVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITS  404 (545)
T ss_pred             cccccc-eeeecCC-----eeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCcee
Confidence            554433 4444444     4899963211   111122223  35899999999877776666555433

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=2.7e-12  Score=147.22  Aligned_cols=188  Identities=12%  Similarity=0.068  Sum_probs=134.7

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecC---CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEE-eCCCC--c
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHA---KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITA-SHSQA--V  476 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~---Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~-~~d~~--i  476 (894)
                      ..+..|...|.+++|+|||++|+..+.   +..|++||+.+|+.. .+..+.+ .+...+|+|||+.|+.. +.++.  +
T Consensus       195 ~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g-~~~~~~~SPDG~~la~~~~~~g~~~I  272 (435)
T PRK05137        195 RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPG-MTFAPRFSPDGRKVVMSLSQGGNTDI  272 (435)
T ss_pred             EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCC-cccCcEECCCCCEEEEEEecCCCceE
Confidence            456778899999999999999888753   468999999988753 4444555 67889999999988654 33332  1


Q ss_pred             -----------------cceEEEEEecCCCEEEEEEC-CC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE
Q psy10063        477 -----------------EPINDMQFSKDATMFITASK-DH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG  536 (894)
Q Consensus       477 -----------------~~V~~l~~spdg~~L~sgs~-Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~  536 (894)
                                       ....+.+|+|||++|+..+. +|  .|++||+..++..+...+...+..++|+|||++|++..
T Consensus       273 y~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~  352 (435)
T PRK05137        273 YTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTK  352 (435)
T ss_pred             EEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEE
Confidence                             23456899999999988764 33  58888988776655544556677889999999999877


Q ss_pred             CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC------CcEEEEECCCC
Q psy10063        537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED------GFLISNTLSNG  605 (894)
Q Consensus       537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D------g~I~vwdl~~~  605 (894)
                      .++.           .+.|.+||+..+.. +.+. +...+..+.|+|||++|+..+.+      ..|+++++..+
T Consensus       353 ~~~~-----------~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~  414 (435)
T PRK05137        353 QGGG-----------QFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR  414 (435)
T ss_pred             cCCC-----------ceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC
Confidence            5432           23477888765443 3332 22357789999999988775543      24777777654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.51  E-value=5.7e-11  Score=128.57  Aligned_cols=114  Identities=8%  Similarity=-0.066  Sum_probs=78.8

Q ss_pred             CCCEEEEecCCCcEEEEEccCC-----ceeeccc----------cCCCceEeecCCCeEEEEecC-C-----CCceeEEE
Q psy10063        771 KREKLALALADKVSERYRDRKN-----KATAGFL----------LSCPDFLFDFDTTREVTTTST-K-----VGKFDARF  829 (894)
Q Consensus       771 dg~~Latgs~Dg~I~iwd~~~~-----~~~~~~~----------~~~~~~~fS~dg~~l~~as~d-~-----~g~~~I~v  829 (894)
                      +|+++.+... |.|.+.|+...     +.+..+.          .+...+++++++++++++... .     .+.-+|.+
T Consensus       205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V  283 (352)
T TIGR02658       205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV  283 (352)
T ss_pred             CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence            6666666555 77777774322     1111111          112247899999999985421 1     11126999


Q ss_pred             eecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEec-CCCcEEEEecCcccccccc-ccC
Q psy10063        830 YHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGG-EDGFVRLHTFDQAYFDYTF-DIS  886 (894)
Q Consensus       830 wd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s-~Dg~V~vWdl~~~~~~~~~-~~~  886 (894)
                      +|.++++.+..+.. ...++.|+|++||+ +|++.. .++.|.|.|+..++.+..+ .+.
T Consensus       284 iD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~~vg  342 (352)
T TIGR02658       284 VDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVNQLG  342 (352)
T ss_pred             EECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeeccCC
Confidence            99999999988874 24788999999999 777655 6788999999999988887 443

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1409|consensus

Probab=99.51  E-value=1.3e-12  Score=133.17  Aligned_cols=193  Identities=15%  Similarity=0.242  Sum_probs=141.7

Q ss_pred             CCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEec-CCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDL-RMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       398 ~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~-~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      ++.+...++||.+.|.+...-|...-|++.+.|.++|||-- +.|+.-..+...-..++.++.+.++.++|+++-+.+.+
T Consensus        13 kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtv   92 (404)
T KOG1409|consen   13 KPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTV   92 (404)
T ss_pred             chhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceE
Confidence            34555678899999999999998889999999999999963 44554444432222288999999999999999888766


Q ss_pred             ----------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEE
Q psy10063        477 ----------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVL  534 (894)
Q Consensus       477 ----------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~  534 (894)
                                            ..|..+-|+...+++++.+.|..+.---.+.+..+..+.......++.|.-.  +.++
T Consensus        93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~fv  170 (404)
T KOG1409|consen   93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YAFV  170 (404)
T ss_pred             EEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE--EEEe
Confidence                                  5788888888888999999998877666666665544433322223333222  4445


Q ss_pred             EECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        535 GGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       535 ~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |...+.+.+           +++ +...-..+..+.+|.+.+.+++|.+..+.|++|..|..+.+||+-.
T Consensus       171 Gd~~gqvt~-----------lr~-~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg  228 (404)
T KOG1409|consen  171 GDHSGQITM-----------LKL-EQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGG  228 (404)
T ss_pred             cccccceEE-----------EEE-eecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccC
Confidence            544554433           333 3344567788899999999999999999999999999999999854

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=3e-12  Score=145.99  Aligned_cols=188  Identities=10%  Similarity=0.037  Sum_probs=131.3

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEec---CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC-CCC--c-
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGH---AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH-SQA--V-  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs---~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~-d~~--i-  476 (894)
                      .+..+...+.+.+|||||++|+..+   .+..|++|++..|+.... ....+ .+..++|+|||++|+.... ++.  + 
T Consensus       193 ~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~-~~~~~~~SPDG~~La~~~~~~g~~~I~  270 (429)
T PRK03629        193 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLY  270 (429)
T ss_pred             EeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCC-CcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence            4555777899999999999888754   345799999998864332 22222 4557899999999987632 332  2 


Q ss_pred             ----------------cceEEEEEecCCCEEEEEECC-CC--EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        477 ----------------EPINDMQFSKDATMFITASKD-HT--AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       477 ----------------~~V~~l~~spdg~~L~sgs~D-g~--V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                                      ..+...+|+|||++|+.++.+ +.  |.++|+..++..+.........+++|+|||++|++.+.
T Consensus       271 ~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~  350 (429)
T PRK03629        271 VMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS  350 (429)
T ss_pred             EEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEc
Confidence                            246688999999999887754 44  44457777665544334455678999999999988776


Q ss_pred             CCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc---EEEEECCCCc
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF---LISNTLSNGL  606 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~---I~vwdl~~~~  606 (894)
                      ++.           .+.|.+||+..++.. .+... .......|+|||++|+.++.++.   +.+|+++...
T Consensus       351 ~~g-----------~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~  409 (429)
T PRK03629        351 NGG-----------QQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRF  409 (429)
T ss_pred             cCC-----------CceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCC
Confidence            542           124888998877644 33322 23457889999999999887764   6777776543

>KOG2139|consensus

Probab=99.50  E-value=3.9e-12  Score=130.43  Aligned_cols=177  Identities=12%  Similarity=0.113  Sum_probs=134.0

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCC-CCEEEEEeCCCCc-----------
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKD-ATMFITASHSQAV-----------  476 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spd-g~~la~~~~d~~i-----------  476 (894)
                      .-.++.++|++.=-.++++..|-.|+|||-.. ++..+|+......|.+++|-|- +..|+++++.|..           
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~  176 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNAN  176 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccc
Confidence            35688899999666788888999999999766 6666666544448999999994 4567777765543           


Q ss_pred             -------------------cceEEEEEecCCCEEEEEEC-CCCEEEEEcCCCcEEEEE-eCCCCeeEEEEcCCCCEEEEE
Q psy10063        477 -------------------EPINDMQFSKDATMFITASK-DHTAKLFTTHDRQLLKTY-TTERPVNSAALSPILPHVVLG  535 (894)
Q Consensus       477 -------------------~~V~~l~~spdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~-~~~~~v~~l~~spdg~~l~~~  535 (894)
                                         ..|.+|+|.+||..|++++. |..|+|||...+..+... .+.+.+.-+.|||||.+|+++
T Consensus       177 r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaA  256 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAA  256 (445)
T ss_pred             cccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEe
Confidence                               48999999999999999875 578999999999887766 456889999999999999999


Q ss_pred             ECCCCeEEEeccCccceeeEEEEec-cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        536 GGQEAREVTTTSTKVGKFDARFYHL-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       536 ~~~~~~~v~~~~~~~~~~~v~vwd~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      .-|+.              .++|.. +.....+-. --.+.|...+|+|+|++|+.... |.-++|.+
T Consensus       257 t~dav--------------frlw~e~q~wt~erw~-lgsgrvqtacWspcGsfLLf~~s-gsp~lysl  308 (445)
T KOG2139|consen  257 TCDAV--------------FRLWQENQSWTKERWI-LGSGRVQTACWSPCGSFLLFACS-GSPRLYSL  308 (445)
T ss_pred             cccce--------------eeeehhcccceeccee-ccCCceeeeeecCCCCEEEEEEc-CCceEEEE
Confidence            99997              555532 222222222 23348999999999998765543 44556654

>KOG1523|consensus

Probab=99.50  E-value=2.8e-12  Score=129.78  Aligned_cols=175  Identities=13%  Similarity=0.106  Sum_probs=134.4

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEec-CCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDL-RMGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~-~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      ...+.|..|...|++|+|+|...+|++|+.|..-+||.. +.++.  ...|..+..                        
T Consensus        46 ~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNr------------------------  101 (361)
T KOG1523|consen   46 EPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINR------------------------  101 (361)
T ss_pred             eeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEecc------------------------
Confidence            344478889999999999999999999999999999998 44443  333444444                        


Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-----CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-----TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-----~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                       .+.+|.|+|.+..||+|+..+.|.||-++...-...-+     +...|.+++|+|.+-+|+.|+.|+..+|+...    
T Consensus       102 -AAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSay----  176 (361)
T KOG1523|consen  102 -AATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAY----  176 (361)
T ss_pred             -ceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEe----
Confidence             68888999999999999999999998877554443222     24678999999999999999999987775432    


Q ss_pred             eeeEEEEec-----------cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        552 KFDARFYHL-----------IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       552 ~~~v~vwd~-----------~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                         |+-.|-           .-|+++.++....+.|..+.|+|+|..|+-.+.|..|.+-|.....
T Consensus       177 ---IK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  177 ---IKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS  239 (361)
T ss_pred             ---eeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence               221111           1234445555567899999999999999999999999999887654

>KOG0290|consensus

Probab=99.49  E-value=7.8e-13  Score=131.80  Aligned_cols=162  Identities=17%  Similarity=0.274  Sum_probs=126.5

Q ss_pred             cCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCe---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        407 DQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGR---ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       407 ~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .|..+++++.|.. |-++|.+.+-|-+..|||++.|.   ....|-.|.+                         .|..|
T Consensus       148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDK-------------------------EV~DI  202 (364)
T KOG0290|consen  148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDK-------------------------EVYDI  202 (364)
T ss_pred             ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCc-------------------------ceeEE
Confidence            3668899999987 66799999999999999999873   3566777887                         56666


Q ss_pred             EEecCC-CEEEEEECCCCEEEEEcCCCcEEEEEeC----CCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccceeeEE
Q psy10063        483 QFSKDA-TMFITASKDHTAKLFTTHDRQLLKTYTT----ERPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       483 ~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~----~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +|..++ ..||+++.||.||+||++..+.-..+..    ..+...++|+++... +++-..+..             +|.
T Consensus       203 af~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~-------------~V~  269 (364)
T KOG0290|consen  203 AFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSN-------------KVV  269 (364)
T ss_pred             EeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCc-------------eEE
Confidence            666543 4789999999999999998765544432    467899999987654 444444443             277


Q ss_pred             EEeccc-cceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCc
Q psy10063        557 FYHLIF-EEEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       557 vwd~~~-~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +.|++. ...+..|.+|.+.|..|+|.|. ..+|++++.|..+.+||+....
T Consensus       270 iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~  321 (364)
T KOG0290|consen  270 ILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMP  321 (364)
T ss_pred             EEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccccc
Confidence            778764 4567889999999999999995 5689999999999999997643

>KOG1188|consensus

Probab=99.49  E-value=2e-12  Score=131.89  Aligned_cols=169  Identities=14%  Similarity=0.199  Sum_probs=123.1

Q ss_pred             eEEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCeEEEEec--CCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGRELESIS--GHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~--~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      .+...+++|...+..++|..  ....|++|+.||.|++||++....+.++.  .+.+.                      
T Consensus        61 ~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~----------------------  118 (376)
T KOG1188|consen   61 QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT----------------------  118 (376)
T ss_pred             hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC----------------------
Confidence            34447889999999999987  45689999999999999998876654444  33321                      


Q ss_pred             ccceEEEEEecCCCEEEEEE----CCCCEEEEEcCCCcE-EEEEe--CCCCeeEEEEcCCC-CEEEEEECCCCeEEEecc
Q psy10063        476 VEPINDMQFSKDATMFITAS----KDHTAKLFTTHDRQL-LKTYT--TERPVNSAALSPIL-PHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       476 i~~V~~l~~spdg~~L~sgs----~Dg~V~iwdl~~~~~-~~~~~--~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~  547 (894)
                        +..|++..-.+++|++|.    .+-.|.+||++..+. ++.+.  |.+.|.+|+|+|.. ..|++|+.||.       
T Consensus       119 --~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGL-------  189 (376)
T KOG1188|consen  119 --PFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGL-------  189 (376)
T ss_pred             --cceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccce-------
Confidence              334444433445555553    356799999998766 55554  67899999999976 56777888886       


Q ss_pred             CccceeeEEEEeccccce---EEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCc
Q psy10063        548 TKVGKFDARFYHLIFEEE---FARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~---~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                             |.+||+.....   +.....|...|.++.|..++ +.|.+.+..+...+|+++.+.
T Consensus       190 -------vnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~  245 (376)
T KOG1188|consen  190 -------VNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS  245 (376)
T ss_pred             -------EEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence                   77777764432   22334577889999999887 458888889999999998765

>KOG2110|consensus

Probab=99.49  E-value=9.2e-12  Score=128.48  Aligned_cols=218  Identities=15%  Similarity=0.138  Sum_probs=158.2

Q ss_pred             eeEEEEcCCCCEEEEEeCCCCc-----------------cceEEEEEecCCCEEEEEECC--CCEEEEEcCCCcEEEEEe
Q psy10063        455 INDMQFSKDATMFITASHSQAV-----------------EPINDMQFSKDATMFITASKD--HTAKLFTTHDRQLLKTYT  515 (894)
Q Consensus       455 V~~v~~spdg~~la~~~~d~~i-----------------~~V~~l~~spdg~~L~sgs~D--g~V~iwdl~~~~~~~~~~  515 (894)
                      +..+.|..|...|..|+.+|.-                 ..|..+-|+.  .+||..+.+  ..+++++.+.+..+..+.
T Consensus         8 i~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~   85 (391)
T KOG2110|consen    8 INFIGFNQDSTLLSVGSKDGYKIFSCSPFEKCFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTTICEIF   85 (391)
T ss_pred             eeeeeeccceeEEEccCCCceeEEecCchHHhhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCceEEEEe
Confidence            3444455555555555555432                 2455566654  456665554  349999999999999988


Q ss_pred             CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC---CCCCeEEEEEecCCCEEEEEe
Q psy10063        516 TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG---HFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       516 ~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~---h~~~V~~l~~spdg~~l~sgs  592 (894)
                      ....|.++.+..  ++|+++-.+.               |.|||++..+.++.+..   +...+.+++++..+.+|+.=+
T Consensus        86 fpt~IL~VrmNr--~RLvV~Lee~---------------IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~  148 (391)
T KOG2110|consen   86 FPTSILAVRMNR--KRLVVCLEES---------------IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPG  148 (391)
T ss_pred             cCCceEEEEEcc--ceEEEEEccc---------------EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecC
Confidence            889999999986  4676666555               88999999998887743   455677777777777887543


Q ss_pred             --CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHH
Q psy10063        593 --EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEM  670 (894)
Q Consensus       593 --~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~  670 (894)
                        .-|.|+|||+..-+.                                                               
T Consensus       149 s~t~GdV~l~d~~nl~~---------------------------------------------------------------  165 (391)
T KOG2110|consen  149 STTSGDVVLFDTINLQP---------------------------------------------------------------  165 (391)
T ss_pred             CCCCceEEEEEccccee---------------------------------------------------------------
Confidence              246788887643210                                                               


Q ss_pred             hhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCC
Q psy10063        671 ARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDG  750 (894)
Q Consensus       671 ~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg  750 (894)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (391)
T KOG2110|consen  166 --------------------------------------------------------------------------------  165 (391)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063        751 SDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFY  830 (894)
Q Consensus       751 ~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vw  830 (894)
                        ...+..|.+.+-+|+|+++|.+||+++..|+|                                          ||||
T Consensus       166 --v~~I~aH~~~lAalafs~~G~llATASeKGTV------------------------------------------IRVf  201 (391)
T KOG2110|consen  166 --VNTINAHKGPLAALAFSPDGTLLATASEKGTV------------------------------------------IRVF  201 (391)
T ss_pred             --eeEEEecCCceeEEEECCCCCEEEEeccCceE------------------------------------------EEEE
Confidence              01344688899999999999999999999975                                          6666


Q ss_pred             ecCCcceeeeccCCC--CCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        831 HLIFEEEFARIKGHF--GPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       831 d~~tg~~l~~l~gH~--~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      .+..|+++..|+...  -.|.+|+|++|+++|++.|.-++|.||.++...
T Consensus       202 ~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  202 SVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS  251 (391)
T ss_pred             EcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence            666676666665322  357899999999999999999999999998765

>KOG0642|consensus

Probab=99.48  E-value=6.1e-13  Score=143.78  Aligned_cols=167  Identities=17%  Similarity=0.252  Sum_probs=124.4

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC------C----eEEEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM------G----RELESISGHAKEPINDMQFSKDATMFITA  470 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t------g----~~~~~l~~h~~~~V~~v~~spdg~~la~~  470 (894)
                      ..+.|++|.++|.|+++++.++.+++|+.||.|+.|.+..      .    .....|.||.+                  
T Consensus       336 pi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtd------------------  397 (577)
T KOG0642|consen  336 PILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTD------------------  397 (577)
T ss_pred             eeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceecccc------------------
Confidence            4458999999999999999999999999999999996531      1    22455667776                  


Q ss_pred             eCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE----------------------------------------
Q psy10063        471 SHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL----------------------------------------  510 (894)
Q Consensus       471 ~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~----------------------------------------  510 (894)
                             .|+.++++....+|++|+.||+|++|.......                                        
T Consensus       398 -------avw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~e  470 (577)
T KOG0642|consen  398 -------AVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDME  470 (577)
T ss_pred             -------ceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhh
Confidence                   555556655555566666666666665443222                                        


Q ss_pred             ----EEEEeC--------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEE
Q psy10063        511 ----LKTYTT--------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS  578 (894)
Q Consensus       511 ----~~~~~~--------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~  578 (894)
                          ++.+..        ...+..+.+.|.+.+.+.+..++.              |+++|...++.++....|...|.+
T Consensus       471 v~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~--------------Ir~~dn~~~~~l~s~~a~~~svts  536 (577)
T KOG0642|consen  471 VVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRS--------------IRFFDNKTGKILHSMVAHKDSVTS  536 (577)
T ss_pred             hhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCc--------------eecccccccccchheeeccceecc
Confidence                111111        013445566666666666666665              899999999999999999999999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        579 LAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       579 l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +++.|.|-+|++++.||.|++|.++...
T Consensus       537 lai~~ng~~l~s~s~d~sv~l~kld~k~  564 (577)
T KOG0642|consen  537 LAIDPNGPYLMSGSHDGSVRLWKLDVKT  564 (577)
T ss_pred             eeecCCCceEEeecCCceeehhhccchh
Confidence            9999999999999999999999987654

>KOG1587|consensus

Probab=99.48  E-value=9.1e-12  Score=141.69  Aligned_cols=286  Identities=14%  Similarity=0.145  Sum_probs=171.7

Q ss_pred             CCCEEEEEcCCC-cEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCccceeeEEEEeccccce--EEE----
Q psy10063        497 DHTAKLFTTHDR-QLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGKFDARFYHLIFEEE--FAR----  568 (894)
Q Consensus       497 Dg~V~iwdl~~~-~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~----  568 (894)
                      ++.+.||+++.. .....+.....|.|+.|+|....+++|| .+|.              |.+||++.+..  ...    
T Consensus       221 ~~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~Gq--------------V~lWD~~~~~~~~~s~ls~~  286 (555)
T KOG1587|consen  221 DGVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQ--------------VVLWDLRKGSDTPPSGLSAL  286 (555)
T ss_pred             CceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCce--------------EEEEEccCCCCCCCcccccc
Confidence            347999999876 6667777889999999999876665555 4554              78888887655  222    


Q ss_pred             ccCCCCCeEEEEEecCCCE--EEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCC
Q psy10063        569 IKGHFGPINSLAFHPDGKS--YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDT  646 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~--l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~  646 (894)
                      ...|..+|..+.|..+-.-  |++++.||.|+.|+++......++.            .+        ....+.      
T Consensus       287 ~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~------------~~--------~~~~~~------  340 (555)
T KOG1587|consen  287 EVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGL------------LL--------ESKKHK------  340 (555)
T ss_pred             cccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhc------------cc--------cccccc------
Confidence            2458889999999875444  9999999999999876432211000            00        000000      


Q ss_pred             CeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCc
Q psy10063        647 GGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDE  726 (894)
Q Consensus       647 ~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~  726 (894)
                           +       -.+             .....+..+.+...+....+.....               |.++.....+.
T Consensus       341 -----~-------~~~-------------~~~~~~t~~~F~~~~p~~FiVGTe~---------------G~v~~~~r~g~  380 (555)
T KOG1587|consen  341 -----G-------QQS-------------SKAVGATSLKFEPTDPNHFIVGTEE---------------GKVYKGCRKGY  380 (555)
T ss_pred             -----c-------ccc-------------ccccceeeEeeccCCCceEEEEcCC---------------cEEEEEeccCC
Confidence                 0       000             0000000111111111111111111               11111000000


Q ss_pred             cccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc-CCceeecccc---CC
Q psy10063        727 QQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR-KNKATAGFLL---SC  802 (894)
Q Consensus       727 ~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~-~~~~~~~~~~---~~  802 (894)
                      .              .+....  -+.......|.+.|+++.++|=+..++..+.|..++||... ....+..+..   .+
T Consensus       381 ~--------------~~~~~~--~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v  444 (555)
T KOG1587|consen  381 T--------------PAPEVS--YKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYV  444 (555)
T ss_pred             c--------------cccccc--ccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhcccee
Confidence            0              000000  01122455688999999999988777766669999999977 5555444433   25


Q ss_pred             CceEeecCCCeE-EEEecCCCCceeEEEeecCCc--ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063        803 PDFLFDFDTTRE-VTTTSTKVGKFDARFYHLIFE--EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       803 ~~~~fS~dg~~l-~~as~d~~g~~~I~vwd~~tg--~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      .+++|||-.-.+ +++.+++    .|.|||+...  +.+...+.+......+.|++.|+.|+.|+.-|.|.||++.....
T Consensus       445 ~~vaWSptrpavF~~~d~~G----~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~l~  520 (555)
T KOG1587|consen  445 TDVAWSPTRPAVFATVDGDG----NLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSESLA  520 (555)
T ss_pred             eeeEEcCcCceEEEEEcCCC----ceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCchhh
Confidence            578899976544 4444454    5999999654  44555666677778889999999999999999999999975544


Q ss_pred             ccc
Q psy10063        880 DYT  882 (894)
Q Consensus       880 ~~~  882 (894)
                      ...
T Consensus       521 ~~~  523 (555)
T KOG1587|consen  521 VPS  523 (555)
T ss_pred             ccC
Confidence            333

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.47  E-value=6.8e-12  Score=139.00  Aligned_cols=323  Identities=11%  Similarity=0.032  Sum_probs=171.3

Q ss_pred             CEE-EEEECCCCEEEEEcCCCcEEEEEeCCCCe-eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063        489 TMF-ITASKDHTAKLFTTHDRQLLKTYTTERPV-NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF  566 (894)
Q Consensus       489 ~~L-~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v-~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~  566 (894)
                      .++ ++-..++.|.|.|..+.+.+..+.....+ ..+.|++||+++++++.++.              |.++|+.+++.+
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~--------------vsviD~~~~~~v   71 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGT--------------VSVIDLATGKVV   71 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSE--------------EEEEETTSSSEE
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCe--------------EEEEECCcccEE
Confidence            344 44556899999999999999999876554 55789999999999998875              899999999999


Q ss_pred             EEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccccC-----------CCceeeeEECcCCc-EEEec--CC
Q psy10063        567 ARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDISE-----------GSFTSSSTQQPDGL-VYPSQ--GG  631 (894)
Q Consensus       567 ~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~~-----------~~~v~~~~~spdg~-~l~~~--~g  631 (894)
                      .+++.-. ...++++++||++|+++. .++.|.++|.++.+.+..           ...+..+..++... ++...  .+
T Consensus        72 ~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~  150 (369)
T PF02239_consen   72 ATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTG  150 (369)
T ss_dssp             EEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTT
T ss_pred             EEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCC
Confidence            9886543 468899999999988775 689999999988765431           11233344444444 22111  23


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                      ++..+++....                .+..                                 .....++..   ....
T Consensus       151 ~I~vVdy~d~~----------------~~~~---------------------------------~~i~~g~~~---~D~~  178 (369)
T PF02239_consen  151 EIWVVDYSDPK----------------NLKV---------------------------------TTIKVGRFP---HDGG  178 (369)
T ss_dssp             EEEEEETTTSS----------------CEEE---------------------------------EEEE--TTE---EEEE
T ss_pred             eEEEEEecccc----------------ccce---------------------------------eeecccccc---cccc
Confidence            33333321110                0000                                 000000000   1133


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccc-cC-CCCc------ceecCCCCceEEEeeCCCCCEEEEecCCCc
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFK-LD-GSDT------PILAGPVDIGFKMPEPPKREKLALALADKV  783 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~-~d-g~~~------~~~~~h~~~v~~la~spdg~~Latgs~Dg~  783 (894)
                      +.++|+.+.+......      .+.+++...+.... .+ |+..      .+.....+.++...  ..+..++..-....
T Consensus       179 ~dpdgry~~va~~~sn------~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~--~~~~~~~~~ig~~~  250 (369)
T PF02239_consen  179 FDPDGRYFLVAANGSN------KIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATS--GLGYFAIPLIGTDP  250 (369)
T ss_dssp             E-TTSSEEEEEEGGGT------EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEE--BSSSSEEEEEE--T
T ss_pred             cCcccceeeecccccc------eeEEEeeccceEEEEeeccccccccccccccCCCcceEEeec--cccceecccccCCc
Confidence            4444444433221111      11111111111100 00 1100      01111112233222  22333333333345


Q ss_pred             EEEEEccCCceeeccccCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC-CCeeEEEEeeCCcEE
Q psy10063        784 SERYRDRKNKATAGFLLSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-GPINSLAFHPDGKSY  860 (894)
Q Consensus       784 I~iwd~~~~~~~~~~~~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-~~V~~l~fSpdg~~L  860 (894)
                      +.+|+....+.++.+.....  -+..+|+++++++........-.|.|+|.++.+.+..+.... ..+..+.|++||+++
T Consensus       251 v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v  330 (369)
T PF02239_consen  251 VSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEV  330 (369)
T ss_dssp             TT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEE
T ss_pred             cccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEE
Confidence            67889888888887765443  345699999999982211112269999999998887775332 358899999999866


Q ss_pred             EEecCC--CcEEEEecCccccccccccC
Q psy10063        861 ASGGED--GFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       861 aS~s~D--g~V~vWdl~~~~~~~~~~~~  886 (894)
                      ..+..|  +.|.|||-.+.+++.++.+.
T Consensus       331 ~vS~~~~~~~i~v~D~~Tl~~~~~i~~~  358 (369)
T PF02239_consen  331 WVSVWDGNGAIVVYDAKTLKEKKRIPVP  358 (369)
T ss_dssp             EEEEE--TTEEEEEETTTTEEEEEEE--
T ss_pred             EEEEecCCCEEEEEECCCcEEEEEEEee
Confidence            554433  36999999999988887643

...

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=1.1e-11  Score=141.67  Aligned_cols=226  Identities=15%  Similarity=0.113  Sum_probs=139.4

Q ss_pred             CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeE
Q psy10063        498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN  577 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~  577 (894)
                      ..|.+||...........+...+.+.+|+|||++|++.+.+..           ...|.+||+..++... +....+.+.
T Consensus       176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~-----------~~~I~~~dl~~g~~~~-l~~~~g~~~  243 (427)
T PRK02889        176 YQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESK-----------KPVVYVHDLATGRRRV-VANFKGSNS  243 (427)
T ss_pred             cEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCC-----------CcEEEEEECCCCCEEE-eecCCCCcc
Confidence            3577777744444444456678999999999999998875432           1238899998886543 333445667


Q ss_pred             EEEEecCCCEEE-EEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccC
Q psy10063        578 SLAFHPDGKSYA-SGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVD  656 (894)
Q Consensus       578 ~l~~spdg~~l~-sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~  656 (894)
                      +++|+|||+.|+ +.+.+|...||.++...                        +..                       
T Consensus       244 ~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~------------------------~~~-----------------------  276 (427)
T PRK02889        244 APAWSPDGRTLAVALSRDGNSQIYTVNADG------------------------SGL-----------------------  276 (427)
T ss_pred             ceEECCCCCEEEEEEccCCCceEEEEECCC------------------------CCc-----------------------
Confidence            899999999876 45677776666542100                        000                       


Q ss_pred             CCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce
Q psy10063        657 DSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM  736 (894)
Q Consensus       657 d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~  736 (894)
                                                                                                      
T Consensus       277 --------------------------------------------------------------------------------  276 (427)
T PRK02889        277 --------------------------------------------------------------------------------  276 (427)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CCcEEEEEc--cCCceee-ccc-cCCCceEeecCC
Q psy10063        737 TWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DKVSERYRD--RKNKATA-GFL-LSCPDFLFDFDT  811 (894)
Q Consensus       737 ~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg~I~iwd~--~~~~~~~-~~~-~~~~~~~fS~dg  811 (894)
                                       ..+..+......+.|+|||++|+..+. ++...||.+  ..++... .+. .......|||||
T Consensus       277 -----------------~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG  339 (427)
T PRK02889        277 -----------------RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDG  339 (427)
T ss_pred             -----------------EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCC
Confidence                             000001111234568899888875543 455666654  3333211 111 123357899999


Q ss_pred             CeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC---cEEEEecCcccccccc
Q psy10063        812 TREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG---FVRLHTFDQAYFDYTF  883 (894)
Q Consensus       812 ~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg---~V~vWdl~~~~~~~~~  883 (894)
                      ++++..+..+ +.+.|++||+..++... +..+ .....++|+|||++|+.++.++   .|.+.++. +.....+
T Consensus       340 ~~Ia~~s~~~-g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l  410 (427)
T PRK02889        340 KLLAYISRVG-GAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRL  410 (427)
T ss_pred             CEEEEEEccC-CcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEe
Confidence            9999877653 44679999999887543 3322 3346789999999988877554   34455553 3334333

>KOG1587|consensus

Probab=99.47  E-value=3.1e-12  Score=145.48  Aligned_cols=182  Identities=18%  Similarity=0.276  Sum_probs=141.4

Q ss_pred             CCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeE--EEE----ecCCCCCCeeEEEEcCCCCE--EEEEeCCCCc--
Q psy10063        408 QSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRE--LES----ISGHAKEPINDMQFSKDATM--FITASHSQAV--  476 (894)
Q Consensus       408 H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~--~~~----l~~h~~~~V~~v~~spdg~~--la~~~~d~~i--  476 (894)
                      -...|.|++|+| +..+||.|..+|.|.+||+..+..  ...    ...|.. +|..+.|-.+..-  |++++.||.+  
T Consensus       241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~-~v~~vvW~~~~~~~~f~s~ssDG~i~~  319 (555)
T KOG1587|consen  241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSE-PVTAVVWLQNEHNTEFFSLSSDGSICS  319 (555)
T ss_pred             cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCc-CeEEEEEeccCCCCceEEEecCCcEee
Confidence            458899999999 556888899999999999987765  222    234666 8999999775544  8999999988  


Q ss_pred             ----------------------------cceEEEEEec-CCCEEEEEECCCCEEEEE---cCCCc-----EE-EEEeCCC
Q psy10063        477 ----------------------------EPINDMQFSK-DATMFITASKDHTAKLFT---THDRQ-----LL-KTYTTER  518 (894)
Q Consensus       477 ----------------------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwd---l~~~~-----~~-~~~~~~~  518 (894)
                                                  ..+.+++|.+ +-..|+.|+++|.|..=.   .+.+.     .+ ....|.+
T Consensus       320 W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g  399 (555)
T KOG1587|consen  320 WDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIG  399 (555)
T ss_pred             eeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCc
Confidence                                        3678899988 677899999999987733   22222     11 2223568


Q ss_pred             CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc-ccceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCc
Q psy10063        519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGF  596 (894)
Q Consensus       519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~  596 (894)
                      .|.++.++|-+..++..++|..              ++||... ...++..+..+...|.+++|||-. ..|+++..||.
T Consensus       400 ~v~~v~~nPF~~k~fls~gDW~--------------vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~  465 (555)
T KOG1587|consen  400 PVYAVSRNPFYPKNFLSVGDWT--------------VRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGN  465 (555)
T ss_pred             ceEeeecCCCccceeeeeccce--------------eEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCc
Confidence            9999999999988888777766              7888776 666777777788889999999964 46788888999


Q ss_pred             EEEEECCC
Q psy10063        597 LISNTLSN  604 (894)
Q Consensus       597 I~vwdl~~  604 (894)
                      |.|||+..
T Consensus       466 l~iWDLl~  473 (555)
T KOG1587|consen  466 LDIWDLLQ  473 (555)
T ss_pred             eehhhhhc
Confidence            99999854

>KOG4227|consensus

Probab=99.46  E-value=6.8e-12  Score=129.23  Aligned_cols=305  Identities=13%  Similarity=0.180  Sum_probs=191.1

Q ss_pred             cCCCccceeeeeccCccEEEecCCCeEEE----------------EEec--CCCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy10063        375 SSPLSVDRLNSMSPAARKLATNAEPVVKM----------------QVTD--QSAKITSLLWGNLDQYIITGHAKGDICTW  436 (894)
Q Consensus       375 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~----------------~l~~--H~~~V~~l~~spdg~~L~sgs~Dg~I~iW  436 (894)
                      ..+..+...+.||..|++|++++++...+                .+.+  |...|.||+|....++|++|+.+++|.+.
T Consensus        53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H  132 (609)
T KOG4227|consen   53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH  132 (609)
T ss_pred             hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence            34556777889999999999988753221                2333  55899999999999999999999999999


Q ss_pred             ecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc-EEEEE-
Q psy10063        437 DLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ-LLKTY-  514 (894)
Q Consensus       437 d~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-~~~~~-  514 (894)
                      |+++.+.+..+.....                       .+.|+.|..+|-...|++.+.+|.|.|||.+..+ .+..+ 
T Consensus       133 DiEt~qsi~V~~~~~~-----------------------~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~  189 (609)
T KOG4227|consen  133 DIETKQSIYVANENNN-----------------------RGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVL  189 (609)
T ss_pred             ecccceeeeeecccCc-----------------------ccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceee
Confidence            9999988877764321                       0168888888877889999999999999998755 22222 


Q ss_pred             --eCCCCeeEEEEcCCCCEE-EEEECCCCeEEEeccCccceeeEEEEeccccce-EE------EccCCCCCeEEEEEecC
Q psy10063        515 --TTERPVNSAALSPILPHV-VLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE-FA------RIKGHFGPINSLAFHPD  584 (894)
Q Consensus       515 --~~~~~v~~l~~spdg~~l-~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~-~~------~l~~h~~~V~~l~~spd  584 (894)
                        ......+.+.|.|....| ++....+.              +-+||.+..+. +.      .|......-.++.|+|.
T Consensus       190 ~AN~~~~F~t~~F~P~~P~Li~~~~~~~G--------------~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~  255 (609)
T KOG4227|consen  190 PANSGKNFYTAEFHPETPALILVNSETGG--------------PNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPS  255 (609)
T ss_pred             ecCCCccceeeeecCCCceeEEeccccCC--------------CCceeeccccchHHhhhccccCcccchhhhheeeCCC
Confidence              235678899999987654 55555555              56666653321 11      11222223467889999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEec
Q psy10063        585 GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTK  664 (894)
Q Consensus       585 g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~  664 (894)
                      |..|++.-....-.+||+-..+..     +......|.|..      .+..+....|  .+...+++|+  .+-.|.+|.
T Consensus       256 G~Q~msiRR~~~P~~~D~~S~R~~-----V~k~D~N~~GY~------N~~T~KS~~F--~~D~~v~tGS--D~~~i~~Wk  320 (609)
T KOG4227|consen  256 GNQFMSIRRGKCPLYFDFISQRCF-----VLKSDHNPNGYC------NIKTIKSMTF--IDDYTVATGS--DHWGIHIWK  320 (609)
T ss_pred             CCeehhhhccCCCEEeeeecccce-----eEeccCCCCcce------eeeeeeeeee--ecceeeeccC--cccceEEEe
Confidence            999888766666677777543211     000000111211      1122222222  1233366666  566777776


Q ss_pred             hhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCc
Q psy10063        665 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT  744 (894)
Q Consensus       665 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~  744 (894)
                      .........                    ...+..++..                           ..+.+         
T Consensus       321 lP~~~ds~G--------------------~~~IG~~~~~---------------------------~~~~~---------  344 (609)
T KOG4227|consen  321 LPRANDSYG--------------------FTQIGHDEEE---------------------------MPSEI---------  344 (609)
T ss_pred             cCCCccccC--------------------ccccCcchhh---------------------------Cchhh---------
Confidence            331110000                    0000000000                           00001         


Q ss_pred             ccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063        745 PFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR  790 (894)
Q Consensus       745 ~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~  790 (894)
                         .-.+.+.++.||...+..+.|+|...+|++.+-.+.|+||...
T Consensus       345 ---~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  345 ---FIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             ---eecceeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence               1123445788999999999999999999999999999999743

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.46  E-value=3e-10  Score=120.33  Aligned_cols=135  Identities=13%  Similarity=0.155  Sum_probs=105.0

Q ss_pred             ceEEEEEecCCCEEEEEECCC-CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDH-TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg-~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|....+.-+++-++.|..|| .|-|+|.+.++..+..+.-+.|.++..+++|++++++-....              |.
T Consensus       361 ~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~e--------------l~  426 (668)
T COG4946         361 GVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFE--------------LW  426 (668)
T ss_pred             ceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceE--------------EE
Confidence            455556666677788888888 788999888877776666789999999999999998876553              77


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC----cEEEEECCCCcccc---CCCceeeeEECcCCcEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG----FLISNTLSNGLDIS---EGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg----~I~vwdl~~~~~~~---~~~~v~~~~~spdg~~l  626 (894)
                      ++|+..|.....-+...+-|..++|||++++||.+--+|    .|+++|+..++...   +-..-.+.+|.|||+.+
T Consensus       427 vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryL  503 (668)
T COG4946         427 VIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYL  503 (668)
T ss_pred             EEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEE
Confidence            888888887666677788999999999999999876665    58999999877442   22333456777888766

>KOG2321|consensus

Probab=99.45  E-value=1.3e-11  Score=133.35  Aligned_cols=292  Identities=13%  Similarity=0.072  Sum_probs=190.5

Q ss_pred             EecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      -.+|...-..|..+|||+|| ++|-+-..|+|||+....  ..|..|....|                       |.-.-
T Consensus        47 dfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS--LKFERhlDae~-----------------------V~fei  101 (703)
T KOG2321|consen   47 DFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS--LKFERHLDAEV-----------------------VDFEI  101 (703)
T ss_pred             hcCCccccceeEecCCCcEEEEecccCCceEEEEcccce--eeeeecccccc-----------------------eeEEE
Confidence            34688888999999999965 567788899999987554  33444543222                       22222


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      ++.|-..++.-..|..|.+...  +.....+.....-..|+++.-..-|++++....              |.-++++.|
T Consensus       102 LsDD~SK~v~L~~DR~IefHak--~G~hy~~RIP~~GRDm~y~~~scDly~~gsg~e--------------vYRlNLEqG  165 (703)
T KOG2321|consen  102 LSDDYSKSVFLQNDRTIEFHAK--YGRHYRTRIPKFGRDMKYHKPSCDLYLVGSGSE--------------VYRLNLEQG  165 (703)
T ss_pred             eccchhhheEeecCceeeehhh--cCeeeeeecCcCCccccccCCCccEEEeecCcc--------------eEEEEcccc
Confidence            2333333333345666655421  111222222333345566544444555544443              788899999


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      +.+..|....+.+++|...+...+|++|+.+|.|.+||.+....+.                         .+.....  
T Consensus       166 rfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~-------------------------~l~~~~~--  218 (703)
T KOG2321|consen  166 RFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVG-------------------------TLDAASS--  218 (703)
T ss_pred             ccccccccccccceeeeecCccceEEecccCceEEEecchhhhhhe-------------------------eeecccc--
Confidence            9999998888999999999998999999999999999987643210                         0000000  


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                                                         +                            
T Consensus       219 ---------------------------------------------------v----------------------------  219 (703)
T KOG2321|consen  219 ---------------------------------------------------V----------------------------  219 (703)
T ss_pred             ---------------------------------------------------c----------------------------
Confidence                                                               0                            


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec--cccC
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG--FLLS  801 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~--~~~~  801 (894)
                             ..              .       ......-.|.++.|+-+|-.+++|..+|.|.|||++..+.+..  +...
T Consensus       220 -------~s--------------~-------pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e  271 (703)
T KOG2321|consen  220 -------NS--------------H-------PGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYE  271 (703)
T ss_pred             -------CC--------------C-------ccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCc
Confidence                   00              0       0000122478899999999999999999999999998877543  3222


Q ss_pred             --CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        802 --CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       802 --~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                        +..+.|-..+..-.+.+.|..   .++|||-.+|+.+..+..-.+ |..+|+-|++.+|+++-+++.+..|=+.
T Consensus       272 ~pi~~l~~~~~~~q~~v~S~Dk~---~~kiWd~~~Gk~~asiEpt~~-lND~C~~p~sGm~f~Ane~~~m~~yyiP  343 (703)
T KOG2321|consen  272 LPIKKLDWQDTDQQNKVVSMDKR---ILKIWDECTGKPMASIEPTSD-LNDFCFVPGSGMFFTANESSKMHTYYIP  343 (703)
T ss_pred             cceeeecccccCCCceEEecchH---HhhhcccccCCceeeccccCC-cCceeeecCCceEEEecCCCcceeEEcc
Confidence              334445444444444445543   499999999999988875444 9999999999999999988877666543

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.45  E-value=2.5e-11  Score=138.93  Aligned_cols=104  Identities=19%  Similarity=0.131  Sum_probs=72.0

Q ss_pred             ceEEEEEecCCCEEEEEECC---CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKD---HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D---g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .+.+.+|+|||++|+.++.+   ..|++||+.+++......+.+.+.+++|+|||+.|++......           ..+
T Consensus       191 ~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~-----------~~~  259 (417)
T TIGR02800       191 PILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDG-----------NPD  259 (417)
T ss_pred             ceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCC-----------Ccc
Confidence            35555666666666665533   4799999998877665556667778999999998887644321           123


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      |.+|++..++. ..+..+.......+|++||++|+..+.
T Consensus       260 i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~  297 (417)
T TIGR02800       260 IYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSD  297 (417)
T ss_pred             EEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEEC
Confidence            78888887654 344455555667899999998877654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2314|consensus

Probab=99.44  E-value=3.6e-11  Score=129.54  Aligned_cols=344  Identities=13%  Similarity=0.085  Sum_probs=200.8

Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      -..+.|||.|.||++--..| |.+|--.+...++.|.|. .|.-+.|||..+||++-+..-.+.-|.-..   .-.++||
T Consensus       213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e---~~~l~IW  287 (698)
T KOG2314|consen  213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNE---GQQLIIW  287 (698)
T ss_pred             eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCC---CceEEEE
Confidence            35689999999999876555 889987777777777654 588899999999999987765443332111   1239999


Q ss_pred             eccccceEEEccCC--CCCeE-EEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEecCC
Q psy10063        559 HLIFEEEFARIKGH--FGPIN-SLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       559 d~~~~~~~~~l~~h--~~~V~-~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      |+.+|...+.+...  ...++ -+.||.|++|+|.... ..|.||+......+.    .-.-+..+.|+|.+.+++-   
T Consensus       288 DI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAY---  363 (698)
T KOG2314|consen  288 DIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAY---  363 (698)
T ss_pred             EccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEE---
Confidence            99999998887652  22333 3589999999998776 468999876644332    2345667778887665531   


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                          |.-.....+.             .+.|...             ..++.++...             -.....-.+.
T Consensus       364 ----wtpe~~~~pa-------------rvtL~ev-------------Ps~~~iRt~n-------------lfnVsDckLh  400 (698)
T KOG2314|consen  364 ----WTPETNNIPA-------------RVTLMEV-------------PSKREIRTKN-------------LFNVSDCKLH  400 (698)
T ss_pred             ----EcccccCCcc-------------eEEEEec-------------Cccceeeecc-------------ceeeeccEEE
Confidence                1110000000             0000000             0000000000             0001111233


Q ss_pred             EcCCCCEEEecccCccccccCCcceeecc-ccCcccccCCCCccee-cCCCCceEEEeeCCCCCEEEEecC---CCcEEE
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGH-IEGTPFKLDGSDTPIL-AGPVDIGFKMPEPPKREKLALALA---DKVSER  786 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~-~~g~~~~~dg~~~~~~-~~h~~~v~~la~spdg~~Latgs~---Dg~I~i  786 (894)
                      +...|..|++.-.......      +.+. ..-.+|.++.+.+.+- ..-.+.|...+|-|.|..+++-+.   ...+++
T Consensus       401 WQk~gdyLcvkvdR~tK~~------~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsf  474 (698)
T KOG2314|consen  401 WQKSGDYLCVKVDRHTKSK------VKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSF  474 (698)
T ss_pred             eccCCcEEEEEEEeecccc------ccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeE
Confidence            3444444444322111110      0000 0111344444444332 234567889999999998886544   346899


Q ss_pred             EEccC-Cc---eeeccc-cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-cCCCCCeeEEEEeeCCcEE
Q psy10063        787 YRDRK-NK---ATAGFL-LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGKSY  860 (894)
Q Consensus       787 wd~~~-~~---~~~~~~-~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-~gH~~~V~~l~fSpdg~~L  860 (894)
                      |.+.. ..   ++..+. ..+..+.|+|.|++++++.--+. .+++..+|..-..+...- ..|. ..+.+.|.|.|+|+
T Consensus       475 Y~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~-~g~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYv  552 (698)
T KOG2314|consen  475 YAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSR-RGDLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYV  552 (698)
T ss_pred             EEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEeccc-ccceEEEecchhhhhhccCcccc-ccccceECCCCCEE
Confidence            98763 21   222222 34567889999999988765432 236999998743332221 2343 45679999999999


Q ss_pred             EEecC------CCcEEEEecCccccccc
Q psy10063        861 ASGGE------DGFVRLHTFDQAYFDYT  882 (894)
Q Consensus       861 aS~s~------Dg~V~vWdl~~~~~~~~  882 (894)
                      ++++.      |.--+||++++..+...
T Consensus       553 vT~ss~wrhk~d~GYri~tfqGrll~~~  580 (698)
T KOG2314|consen  553 VTSSSSWRHKVDNGYRIFTFQGRLLKED  580 (698)
T ss_pred             EEeeehhhhccccceEEEEeecHHHHHH
Confidence            99873      44567888876655443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.43  E-value=1.7e-11  Score=123.54  Aligned_cols=113  Identities=19%  Similarity=0.330  Sum_probs=88.5

Q ss_pred             ceEEEEEecCCCEEEEE--ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITA--SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sg--s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .|.+++|+|+|+.||++  ..++.|.|||++ ++.+..+. ...+..|.|+|+|++|++++.++..           .+|
T Consensus        61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~-----------G~l  127 (194)
T PF08662_consen   61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLN-----------GDL  127 (194)
T ss_pred             ceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCC-----------cEE
Confidence            58888888888876554  456799999997 66666664 4677899999999999999865320           138


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC------CCcEEEEECCCC
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE------DGFLISNTLSNG  605 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~------Dg~I~vwdl~~~  605 (894)
                      .+||++..+.+..+. | ..+..++|+|||++|+++..      |..++||++.+.
T Consensus       128 ~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  128 EFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             EEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence            999999888887664 3 35789999999999998864      778999998643

>KOG1310|consensus

Probab=99.42  E-value=1.8e-12  Score=138.97  Aligned_cols=114  Identities=19%  Similarity=0.332  Sum_probs=95.0

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .|.|++|+.+|.+|++|+.|-.|.|||.-..++++.+.  |-.-|.++.|-|.  .+.+++|.+|..             
T Consensus        52 CVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~-------------  118 (758)
T KOG1310|consen   52 CVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKL-------------  118 (758)
T ss_pred             eecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcce-------------
Confidence            89999999999999999999999999999999998887  4578999999985  456677777775             


Q ss_pred             eEEEEeccc----------cceEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCC
Q psy10063        554 DARFYHLIF----------EEEFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       554 ~v~vwd~~~----------~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~  605 (894)
                       |+++|+..          .+.++.+..|...|..|+-.|++ ..+.++++||.|+-+|++..
T Consensus       119 -i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREp  180 (758)
T KOG1310|consen  119 -IKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREP  180 (758)
T ss_pred             -EEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCC
Confidence             66777653          23344556789999999999998 67889999999999999764

>KOG3881|consensus

Probab=99.42  E-value=1.6e-11  Score=127.61  Aligned_cols=259  Identities=16%  Similarity=0.137  Sum_probs=173.5

Q ss_pred             cCCCCEEEEEEccCCC--EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        407 DQSAKITSLLWGNLDQ--YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +...+|.+++|.-|++  .|+-.+.|..+..+++....+...+..-     ..+.+..              +.|..++.
T Consensus        53 ~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~-----~~~~l~~--------------~~I~gl~~  113 (412)
T KOG3881|consen   53 DELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDA-----KTVSLGT--------------KSIKGLKL  113 (412)
T ss_pred             chhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccc-----ccccccc--------------ccccchhh
Confidence            3457788899987765  4444446667888877766654433110     0000000              14555554


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCc----EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQ----LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      . | ..|++|-.+|.+++|..+.+.    .+..+..+..+..|.-++...+|++.|+...+.           .+++||+
T Consensus       114 ~-d-g~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n-----------~lkiwdl  180 (412)
T KOG3881|consen  114 A-D-GTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENIN-----------ELKIWDL  180 (412)
T ss_pred             c-C-CEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhccc-----------ceeeeec
Confidence            3 2 357888899999999988443    444555667888888888888887755544222           2788888


Q ss_pred             cccceEEEccCC---------CCCeEEEEEecC--CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        561 IFEEEFARIKGH---------FGPINSLAFHPD--GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       561 ~~~~~~~~l~~h---------~~~V~~l~~spd--g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                      +..+.+..-+.-         .-++.++.|-+.  ...||++..-+.||+||.+.+++.     +               
T Consensus       181 e~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP-----V---------------  240 (412)
T KOG3881|consen  181 EQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP-----V---------------  240 (412)
T ss_pred             ccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc-----e---------------
Confidence            877555443221         124567778776  678999998999999988643210     0               


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                          .                                                                           
T Consensus       241 ----~---------------------------------------------------------------------------  241 (412)
T KOG3881|consen  241 ----A---------------------------------------------------------------------------  241 (412)
T ss_pred             ----e---------------------------------------------------------------------------
Confidence                0                                                                           


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                                                                   .+.-.+..+.++...|++.+|++|..-|.      
T Consensus       242 ---------------------------------------------~fd~~E~~is~~~l~p~gn~Iy~gn~~g~------  270 (412)
T KOG3881|consen  242 ---------------------------------------------QFDFLENPISSTGLTPSGNFIYTGNTKGQ------  270 (412)
T ss_pred             ---------------------------------------------EeccccCcceeeeecCCCcEEEEecccch------
Confidence                                                         00001234567777788888887766664      


Q ss_pred             cCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-ccCCCCCeeEEEEeeCCcEEEEecCCCc
Q psy10063        790 RKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGF  868 (894)
Q Consensus       790 ~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-l~gH~~~V~~l~fSpdg~~LaS~s~Dg~  868 (894)
                                                           +..||+..++++.. +++-.+.|++|..+|.+++||+||.|..
T Consensus       271 -------------------------------------l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRy  313 (412)
T KOG3881|consen  271 -------------------------------------LAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRY  313 (412)
T ss_pred             -------------------------------------hheecccCceeeccccCCccCCcceEEEcCCCceEEeecccee
Confidence                                                 55566666666655 8889999999999999999999999999


Q ss_pred             EEEEecCccccccccc
Q psy10063        869 VRLHTFDQAYFDYTFD  884 (894)
Q Consensus       869 V~vWdl~~~~~~~~~~  884 (894)
                      |||+|++..+++++.-
T Consensus       314 vRIhD~ktrkll~kvY  329 (412)
T KOG3881|consen  314 VRIHDIKTRKLLHKVY  329 (412)
T ss_pred             EEEeecccchhhhhhh
Confidence            9999999977776643

>KOG2315|consensus

Probab=99.42  E-value=1.2e-10  Score=126.26  Aligned_cols=363  Identities=13%  Similarity=0.053  Sum_probs=199.3

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      ...+...++|++|++++.+. +..|+|++...++.+......   .+.++.|+|.|.+|.+.-.       ..+.-....
T Consensus        34 ~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~---~~~~L~fSP~g~yL~T~e~-------~~i~~~~~~  102 (566)
T KOG2315|consen   34 SRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELK---KTYDLLFSPKGNYLLTWEP-------WAIYGPKNA  102 (566)
T ss_pred             CCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccc---eeeeeeecccccccccccc-------cccccCCCC
Confidence            44477889999998888876 458999999888644443332   4666777776666554321       111100000


Q ss_pred             CEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063        489 TMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA  567 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~  567 (894)
                             ..--+++|+++++.....+... ..-+++.|+.|..+.+-.....               +.+|++...+.+.
T Consensus       103 -------~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~ne---------------v~f~~~~~f~~~~  160 (566)
T KOG2315|consen  103 -------SNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNE---------------VQFYDLGSFKTIQ  160 (566)
T ss_pred             -------CCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhhcce---------------EEEEecCCcccee
Confidence                   1345889999996666666542 2227999999987655443333               7888887644332


Q ss_pred             EccCCCCCeEEEEEecCCC--EEE-----EEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        568 RIKGHFGPINSLAFHPDGK--SYA-----SGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       568 ~l~~h~~~V~~l~~spdg~--~l~-----sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      . +-|...|..+.++|.+.  +|+     ..|.-+.|+||.+.........  ...--|.        .+.....|... 
T Consensus       161 ~-kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~--a~ksFFk--------adkvqm~WN~~-  228 (566)
T KOG2315|consen  161 H-KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPV--ANKSFFK--------ADKVQMKWNKL-  228 (566)
T ss_pred             e-eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchh--hhccccc--------cceeEEEeccC-
Confidence            1 23677889999998643  333     2355567999988632211000  0000001        11111111110 


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC-CcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD-EQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                          ....++..+...|+.=.               .......++....+ ....+.+.+.+.    ...+.+++.|..+
T Consensus       229 ----gt~LLvLastdVDktn~---------------SYYGEq~Lyll~t~g~s~~V~L~k~GP----Vhdv~W~~s~~EF  285 (566)
T KOG2315|consen  229 ----GTALLVLASTDVDKTNA---------------SYYGEQTLYLLATQGESVSVPLLKEGP----VHDVTWSPSGREF  285 (566)
T ss_pred             ----CceEEEEEEEeecCCCc---------------cccccceEEEEEecCceEEEecCCCCC----ceEEEECCCCCEE
Confidence                00011111100000000               00011112222222 111222222222    2335677777665


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC---CcEEEEEccCCceee
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD---KVSERYRDRKNKATA  796 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D---g~I~iwd~~~~~~~~  796 (894)
                      ++               ++|.+-..+-..+.++..++.-..+.-.++-|+|.|++|+.++-+   |.|.|||+...+++.
T Consensus       286 ~V---------------vyGfMPAkvtifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~  350 (566)
T KOG2315|consen  286 AV---------------VYGFMPAKVTIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIA  350 (566)
T ss_pred             EE---------------EEecccceEEEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcc
Confidence            55               223333332233344445566667777899999999999987654   689999999988888


Q ss_pred             ccccCCC-ceEeecCCCeEEEEecCCCC--ceeEEEeecCCcceeeeccCCCCCeeEEEEeeC
Q psy10063        797 GFLLSCP-DFLFDFDTTREVTTTSTKVG--KFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       797 ~~~~~~~-~~~fS~dg~~l~~as~d~~g--~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd  856 (894)
                      .+...-. -..|+|||++++++...-.-  +-.|+||++. |.++....-.+ +.+.+.|-|.
T Consensus       351 ~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f~s-EL~qv~W~P~  411 (566)
T KOG2315|consen  351 KFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKMFKS-ELLQVEWRPF  411 (566)
T ss_pred             ccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-CceeehhhhhH-hHhheeeeec
Confidence            7776544 45599999999998765110  0128999986 65554332222 5778888764

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.41  E-value=1.8e-11  Score=140.22  Aligned_cols=185  Identities=17%  Similarity=0.111  Sum_probs=123.1

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .+..|...|.+++|+|||++|+..+.+   ..|++||+..++... +....+ .                        ..
T Consensus       198 ~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g-~------------------------~~  251 (433)
T PRK04922        198 TILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRG-I------------------------NG  251 (433)
T ss_pred             EeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCC-C------------------------cc
Confidence            456677889999999999999987643   469999998876533 333333 2                        23


Q ss_pred             EEEEecCCCEEE-EEECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        481 DMQFSKDATMFI-TASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       481 ~l~~spdg~~L~-sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +++|+|||++|+ +.+.+|  .|++||+..+++.+...+......++|+|||++|++.+....           ..+|.+
T Consensus       252 ~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g-----------~~~iy~  320 (433)
T PRK04922        252 APSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGG-----------RPQIYR  320 (433)
T ss_pred             CceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCC-----------CceEEE
Confidence            445566665543 233444  599999998887655444455578899999999998875432           113666


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC---cEEEEECCCCccc--cCCCceeeeEECcCCcEE
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG---FLISNTLSNGLDI--SEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg---~I~vwdl~~~~~~--~~~~~v~~~~~spdg~~l  626 (894)
                      +++..++..+ +..+......++|+|||++|+..+.++   .|++|++..++..  ..+.......|+|+|..+
T Consensus       321 ~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~spdG~~i  393 (433)
T PRK04922        321 VAASGGSAER-LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAPNGSMV  393 (433)
T ss_pred             EECCCCCeEE-eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCCCCCCCceECCCCCEE
Confidence            7776665433 322334455789999999998765443   5899999776532  223334456778887655

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.41  E-value=8.2e-11  Score=135.07  Aligned_cols=104  Identities=13%  Similarity=0.059  Sum_probs=72.1

Q ss_pred             ceEEEEEecCCCEEEEEECC---CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKD---HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D---g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .+.+.+|+|||++|+..+.+   ..|.+||+..++........+.+..++|+|||++|++....+.           ..+
T Consensus       200 ~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g-----------~~~  268 (430)
T PRK00178        200 PILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG-----------NPE  268 (430)
T ss_pred             ceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCC-----------Cce
Confidence            45666667777766655433   3688999998877655444555668999999999986553321           124


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      |.+||+..++.. .+..+........|+|||+.|+..+.
T Consensus       269 Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~  306 (430)
T PRK00178        269 IYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSD  306 (430)
T ss_pred             EEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEEC
Confidence            888898877644 45556666777899999998776653

>KOG0974|consensus

Probab=99.41  E-value=8.1e-12  Score=144.18  Aligned_cols=179  Identities=14%  Similarity=0.130  Sum_probs=115.9

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCee---EEEEcCCCCEEEEEeCCCCc----------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPIN---DMQFSKDATMFITASHSQAV----------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~---~v~~spdg~~la~~~~d~~i----------  476 (894)
                      +.+.++++-.  +||+.|+. ..|.+||+..+..+..+...+.-++.   ... .-.+.+++.+...+.+          
T Consensus         8 ~~l~~~~~~~--~~llag~g-p~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~-~l~~~~~v~~~~~~~v~~~~~~~~~~   83 (967)
T KOG0974|consen    8 GPLNLPQLVS--DYLLAGSG-PEILVYDLSSGCLIRHLIQSKILEVHRGEGKV-KLLSGKIVTCAKSDEVYVKEASNQII   83 (967)
T ss_pred             ccccchhhcc--ceeeecCC-CceEEeeCCchhHhhhhhhhcccccccccccc-eeccceEEEEEeecceeecchhhhhh
Confidence            3444444433  57777754 47999999988765444321110111   000 0122334433332222          


Q ss_pred             ----cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCe-----eEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        477 ----EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPV-----NSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       477 ----~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v-----~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                          ..|....+..+.++++.+..+..+.|||...+..+..+.+....     .-+.++++.-++++|+..+.+      
T Consensus        84 ~~~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~i------  157 (967)
T KOG0974|consen   84 ERFSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEI------  157 (967)
T ss_pred             hhccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccE------
Confidence                34444455556778888889999999999998888877765432     223456666788888888874      


Q ss_pred             CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                              .+|+......-..+.||.+.|.++.|+-||+++++.|+|..+|+|++++.+
T Consensus       158 --------ivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~  208 (967)
T KOG0974|consen  158 --------IVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSRE  208 (967)
T ss_pred             --------EEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeeccccc
Confidence                    445444222222678999999999999999999999999999999997653

>KOG2139|consensus

Probab=99.40  E-value=2.9e-11  Score=124.13  Aligned_cols=124  Identities=13%  Similarity=0.257  Sum_probs=85.9

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .+..++|++.-..|+++..|-.|+|||-.. ++...+++  +..|.|++|-|-+. .|++++..| +.+|..+.....-.
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r  177 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANR  177 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCccccccc
Confidence            578889998767788999999999999776 66666665  57899999999754 566666555 55555443322111


Q ss_pred             EEEEeccccc--eEEEccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECCCCc
Q psy10063        555 ARFYHLIFEE--EFARIKGHFGPINSLAFHPDGKSYASGGE-DGFLISNTLSNGL  606 (894)
Q Consensus       555 v~vwd~~~~~--~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~~~  606 (894)
                      .+  .+.+..  .+.+.+|| ..|.+|+|.+||..|++++. |..|.|||.+.+.
T Consensus       178 ~~--~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~  229 (445)
T KOG2139|consen  178 NI--RMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ  229 (445)
T ss_pred             cc--ccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCC
Confidence            00  011111  12233456 68999999999999999885 6679999998764

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.40  E-value=7.4e-11  Score=135.20  Aligned_cols=104  Identities=17%  Similarity=0.124  Sum_probs=70.9

Q ss_pred             ceEEEEEecCCCEEEEEECC---CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKD---HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D---g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .+.+.+|+|||++|+..+.+   ..|++||+..++........+....++|+|||+.|++....+.           ..+
T Consensus       219 ~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g-----------~~~  287 (448)
T PRK04792        219 PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDG-----------QPE  287 (448)
T ss_pred             cccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCC-----------CeE
Confidence            45666677777766665432   3588899988876544434445568899999999887543321           124


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      |.+||+..++. ..+..+...+..++|+|||++|+..+.
T Consensus       288 Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~  325 (448)
T PRK04792        288 IYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSE  325 (448)
T ss_pred             EEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEEC
Confidence            77888887654 445556666778999999998876653

>KOG2111|consensus

Probab=99.40  E-value=3.5e-10  Score=114.86  Aligned_cols=76  Identities=7%  Similarity=-0.053  Sum_probs=66.8

Q ss_pred             eecCCCCceEEEeeCCCCCEEEEecCCCc-EEEEEccCCceeeccccCC-----CceEeecCCCeEEEEecCCCCceeEE
Q psy10063        755 ILAGPVDIGFKMPEPPKREKLALALADKV-SERYRDRKNKATAGFLLSC-----PDFLFDFDTTREVTTTSTKVGKFDAR  828 (894)
Q Consensus       755 ~~~~h~~~v~~la~spdg~~Latgs~Dg~-I~iwd~~~~~~~~~~~~~~-----~~~~fS~dg~~l~~as~d~~g~~~I~  828 (894)
                      ++..|...|.|+++..+|.+||+++..|+ |||||..++..+.++..+.     ..++|||++++|++++..+    +|+
T Consensus       176 ~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg----TlH  251 (346)
T KOG2111|consen  176 IINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG----TLH  251 (346)
T ss_pred             EEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC----eEE
Confidence            46679999999999999999999999997 8999999999988776554     4678999999999998877    699


Q ss_pred             EeecCC
Q psy10063        829 FYHLIF  834 (894)
Q Consensus       829 vwd~~t  834 (894)
                      ||.++.
T Consensus       252 iF~l~~  257 (346)
T KOG2111|consen  252 IFSLRD  257 (346)
T ss_pred             EEEeec
Confidence            998865

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=1.5e-10  Score=131.74  Aligned_cols=93  Identities=10%  Similarity=-0.050  Sum_probs=63.5

Q ss_pred             eEEEeeCCCCCEEEEecCC---CcEEEEEccCCceeecc--ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063        763 GFKMPEPPKREKLALALAD---KVSERYRDRKNKATAGF--LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE  837 (894)
Q Consensus       763 v~~la~spdg~~Latgs~D---g~I~iwd~~~~~~~~~~--~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~  837 (894)
                      +...+|+|||++|+..+.+   ..|++||+..++...-.  ........|++||+.|+...... +...|++||+..++.
T Consensus       329 ~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl~~g~~  407 (428)
T PRK01029        329 SSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNS-NESELYLISLITKKT  407 (428)
T ss_pred             ccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCC-CCceEEEEECCCCCE
Confidence            3456788999888865443   36899998877653222  22345678999999998766543 345799999987765


Q ss_pred             eeeccCCCCCeeEEEEeeCC
Q psy10063        838 FARIKGHFGPINSLAFHPDG  857 (894)
Q Consensus       838 l~~l~gH~~~V~~l~fSpdg  857 (894)
                      .... ...+.+...+|+|-.
T Consensus       408 ~~Lt-~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        408 RKIV-IGSGEKRFPSWGAFP  426 (428)
T ss_pred             EEee-cCCCcccCceecCCC
Confidence            4433 345567788888743

>KOG1912|consensus

Probab=99.38  E-value=3.1e-10  Score=126.62  Aligned_cols=179  Identities=14%  Similarity=0.172  Sum_probs=125.3

Q ss_pred             EEecCCCCEEEEEEccCC------------CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063        404 QVTDQSAKITSLLWGNLD------------QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg------------~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~  471 (894)
                      .+.-|+..|..+.|+|..            -+||++...|.|.|||+..+..+..|..|.+ +|..++|-+         
T Consensus        50 sie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~-~~qdl~W~~---------  119 (1062)
T KOG1912|consen   50 SIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSND-SVQDLCWVP---------  119 (1062)
T ss_pred             ccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCc-chhheeeee---------
Confidence            556799999999998731            2677788889999999999998888888877 554444432         


Q ss_pred             CCCCccceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCC-CCEEEEEECCCCeEEEeccC
Q psy10063        472 HSQAVEPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPI-LPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       472 ~d~~i~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~  548 (894)
                                  +-++. .+|+.-.....|.+|+..+|+.+..+.. +....|+.+.|- .+++.+.+..|.+.+.+.-.
T Consensus       120 ------------~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~  187 (1062)
T KOG1912|consen  120 ------------ARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLG  187 (1062)
T ss_pred             ------------ccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccC
Confidence                        12244 4556666678899999999988877664 455666888874 45555555555443332210


Q ss_pred             c------cce------------------------------------------------------eeEEEEeccccceEEE
Q psy10063        549 K------VGK------------------------------------------------------FDARFYHLIFEEEFAR  568 (894)
Q Consensus       549 ~------~~~------------------------------------------------------~~v~vwd~~~~~~~~~  568 (894)
                      .      ..+                                                      -++.++|++-..++..
T Consensus       188 ~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~v  267 (1062)
T KOG1912|consen  188 LSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAV  267 (1062)
T ss_pred             CCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEE
Confidence            0      000                                                      0267778887777777


Q ss_pred             ccCCCCCeEEEEEecCCC--EEEEEeCCCcEEEEECCC
Q psy10063        569 IKGHFGPINSLAFHPDGK--SYASGGEDGFLISNTLSN  604 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~--~l~sgs~Dg~I~vwdl~~  604 (894)
                      +.-..+.+.-+.|-|+++  .|+++..||.+.+|..+.
T Consensus       268 vpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  268 VPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             EEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence            777777778888888765  699999999999997654

>KOG1240|consensus

Probab=99.38  E-value=7.4e-11  Score=137.71  Aligned_cols=267  Identities=11%  Similarity=0.042  Sum_probs=170.4

Q ss_pred             EecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEEEECCCCEEEEEcCCC------
Q psy10063        436 WDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFITASKDHTAKLFTTHDR------  508 (894)
Q Consensus       436 Wd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~------  508 (894)
                      |.++ |..+..|..|..                         .|..++.++ ++.+|++||.||+||||+++.-      
T Consensus      1034 W~p~-G~lVAhL~Ehs~-------------------------~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s 1087 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSS-------------------------AVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGS 1087 (1431)
T ss_pred             CCcc-ceEeehhhhccc-------------------------cccceeecCCCCceEEEecCCceEEEeeehhhhcCcce
Confidence            8766 888888888887                         455555555 5689999999999999998742      


Q ss_pred             -cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCC-CCe-EEEEEec-
Q psy10063        509 -QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-GPI-NSLAFHP-  583 (894)
Q Consensus       509 -~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~-~~V-~~l~~sp-  583 (894)
                       +...++. .+..+.++.+++.|..+++++.||.+++..++.....    ..   ...+.+....+. +.| ...+|.. 
T Consensus      1088 ~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~----~~---~~~~~ri~n~~~~g~vv~m~a~~~~ 1160 (1431)
T KOG1240|consen 1088 ARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVS----KR---VATQVRIPNLKKDGVVVSMHAFTAI 1160 (1431)
T ss_pred             eeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccc----cc---eeeeeecccccCCCceEEeeccccc
Confidence             2233344 4688999999999999999999998766544431100    00   011111111111 122 2223322 


Q ss_pred             CCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEE
Q psy10063        584 DGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVEL  662 (894)
Q Consensus       584 dg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l  662 (894)
                      ++. .|+.+..-+.|..||++....++                                                     
T Consensus      1161 ~~S~~lvy~T~~~~iv~~D~r~~~~~w----------------------------------------------------- 1187 (1431)
T KOG1240|consen 1161 VQSHVLVYATDLSRIVSWDTRMRHDAW----------------------------------------------------- 1187 (1431)
T ss_pred             ccceeEEEEEeccceEEecchhhhhHH-----------------------------------------------------
Confidence            222 45666666677777764322110                                                     


Q ss_pred             echhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeecccc
Q psy10063        663 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIE  742 (894)
Q Consensus       663 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~  742 (894)
                       .                                                                              
T Consensus      1188 -~------------------------------------------------------------------------------ 1188 (1431)
T KOG1240|consen 1188 -R------------------------------------------------------------------------------ 1188 (1431)
T ss_pred             -h------------------------------------------------------------------------------
Confidence             0                                                                              


Q ss_pred             CcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCC----ceEeec---CCCeEE
Q psy10063        743 GTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP----DFLFDF---DTTREV  815 (894)
Q Consensus       743 g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~----~~~fS~---dg~~l~  815 (894)
                           .      ......+.|.+++.+|.+.+|++|...|.+.+||++=...+..+..++.    .++.++   .....+
T Consensus      1189 -----l------k~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~v 1257 (1431)
T KOG1240|consen 1189 -----L------KNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSV 1257 (1431)
T ss_pred             -----h------hcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEE
Confidence                 0      0111235688999999999999999999999999987777666654433    344443   445666


Q ss_pred             EEecCCCCceeEEEeecCCcceeeeccCC-------------------CCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        816 TTTSTKVGKFDARFYHLIFEEEFARIKGH-------------------FGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       816 ~as~d~~g~~~I~vwd~~tg~~l~~l~gH-------------------~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      +++....+  .|.+|++..|.+-..+...                   .-....+++..-+.++.+||.|+.||.||...
T Consensus      1258 s~~~~~~n--evs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1258 SAGSSSNN--EVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred             EecccCCC--ceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence            66663333  6999999988655444322                   11222344445567899999999999999877


Q ss_pred             cccc
Q psy10063        877 AYFD  880 (894)
Q Consensus       877 ~~~~  880 (894)
                      .+..
T Consensus      1336 p~~s 1339 (1431)
T KOG1240|consen 1336 PEIS 1339 (1431)
T ss_pred             cccc
Confidence            6655

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.37  E-value=3.4e-10  Score=121.41  Aligned_cols=223  Identities=14%  Similarity=0.119  Sum_probs=147.0

Q ss_pred             CCccceeeeeccCccEEEecCCCeEEE--------EEecCCCCEEEEEEccCCCEEEEecCCC---------------cE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEPVVKM--------QVTDQSAKITSLLWGNLDQYIITGHAKG---------------DI  433 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~--------~l~~H~~~V~~l~~spdg~~L~sgs~Dg---------------~I  433 (894)
                      ..-.....++||-|++|++.....+..        ..+-....|.-+.|||.++||++-+..+               .+
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~  110 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNV  110 (561)
T ss_pred             cCcchhheeecCcchheehhhccceEEccccchhheeeeecCCceecccCcccceeeeeccCCccChhhccCCccccCce
Confidence            334556778999999998764433322        2222346688999999999999876543               49


Q ss_pred             EEEecCCCeEEEEecCCCCCC--ee-EEEEcCCCCEEEEEeCC-CC-----------------ccceEEEEEecCCC--E
Q psy10063        434 CTWDLRMGRELESISGHAKEP--IN-DMQFSKDATMFITASHS-QA-----------------VEPINDMQFSKDAT--M  490 (894)
Q Consensus       434 ~iWd~~tg~~~~~l~~h~~~~--V~-~v~~spdg~~la~~~~d-~~-----------------i~~V~~l~~spdg~--~  490 (894)
                      .|||+.+|..+..+.+... +  .+ -+.|+-+..++|-...+ -.                 +..|...+|+|.|.  .
T Consensus       111 ~vwd~~sg~iv~sf~~~~q-~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~  189 (561)
T COG5354         111 FVWDIASGMIVFSFNGISQ-PYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDE  189 (561)
T ss_pred             eEEeccCceeEeeccccCC-cccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEecCCCCCce
Confidence            9999999999999887665 3  44 67888887765532111 11                 14788888999543  3


Q ss_pred             EEE-----EECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        491 FIT-----ASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       491 L~s-----gs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      ||.     ...++.++||.+..++.+..... ...-..+.|.+.|.+|++-.....   -.-..-.+.-.+.++++.. .
T Consensus       190 la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~---ksnKsyfgesnLyl~~~~e-~  265 (561)
T COG5354         190 LAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHT---KSNKSYFGESNLYLLRITE-R  265 (561)
T ss_pred             EEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEee---ecccceeccceEEEEeecc-c
Confidence            444     35678899999987776655432 334467889999999887543321   0001111222477777773 3


Q ss_pred             eEEEccCCCCCeEEEEEecCCCEEEEEe--CCCcEEEEECCC
Q psy10063        565 EFARIKGHFGPINSLAFHPDGKSYASGG--EDGFLISNTLSN  604 (894)
Q Consensus       565 ~~~~l~~h~~~V~~l~~spdg~~l~sgs--~Dg~I~vwdl~~  604 (894)
                      -+....+..++|..++|.|.++.++.++  .+..+.++|++.
T Consensus       266 ~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~  307 (561)
T COG5354         266 SIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG  307 (561)
T ss_pred             ccceeccccccceeeeecccCCceeEEecccccceeeccccc
Confidence            3333336688999999999888766544  566777777754

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.37  E-value=1.4e-09  Score=120.61  Aligned_cols=115  Identities=9%  Similarity=0.029  Sum_probs=69.1

Q ss_pred             EEEeeCCCCCEEEE-ecCCCcEEEEEcc--CCce--eeccc---------cCCCceEeecCCCeEEEEecCCCCceeEEE
Q psy10063        764 FKMPEPPKREKLAL-ALADKVSERYRDR--KNKA--TAGFL---------LSCPDFLFDFDTTREVTTTSTKVGKFDARF  829 (894)
Q Consensus       764 ~~la~spdg~~Lat-gs~Dg~I~iwd~~--~~~~--~~~~~---------~~~~~~~fS~dg~~l~~as~d~~g~~~I~v  829 (894)
                      ..|+|+|+++++.+ ...++.|.+|++.  .+..  +..+.         .....+++++||++|+++.....   .|.+
T Consensus       195 Rh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~---sI~v  271 (345)
T PF10282_consen  195 RHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSN---SISV  271 (345)
T ss_dssp             EEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTT---EEEE
T ss_pred             cEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCC---EEEE
Confidence            45666677666543 3445566666665  2211  11111         12335678999998888766544   6999


Q ss_pred             eecC--Ccc--eeeeccCCCCCeeEEEEeeCCcEEEEec-CCCcEEEEecC--cccccc
Q psy10063        830 YHLI--FEE--EFARIKGHFGPINSLAFHPDGKSYASGG-EDGFVRLHTFD--QAYFDY  881 (894)
Q Consensus       830 wd~~--tg~--~l~~l~gH~~~V~~l~fSpdg~~LaS~s-~Dg~V~vWdl~--~~~~~~  881 (894)
                      |++.  +|+  .+..+.......+.++|+|||++|+++. .++.|.+|+++  .+.+..
T Consensus       272 f~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~  330 (345)
T PF10282_consen  272 FDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTP  330 (345)
T ss_dssp             EEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred             EEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEE
Confidence            9983  233  3333433344578999999999988765 66789999884  554443

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG1517|consensus

Probab=99.37  E-value=6.2e-11  Score=136.17  Aligned_cols=194  Identities=14%  Similarity=0.195  Sum_probs=128.9

Q ss_pred             cceeeeeccCccEEEecCCC-eEEE-------EEec------CCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCC--
Q psy10063        380 VDRLNSMSPAARKLATNAEP-VVKM-------QVTD------QSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMG--  441 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~-~~~~-------~l~~------H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg--  441 (894)
                      ..+...|++-...++...+. .+++       .|.+      ....|+.+++-.  |..+|++|+.||.||||+--..  
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence            34566677777666666533 2222       1111      236788898876  4459999999999999974221  


Q ss_pred             ---eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-
Q psy10063        442 ---RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-  517 (894)
Q Consensus       442 ---~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-  517 (894)
                         +.+..+.+     +..+...+.|.            . .-++|.....+|++++.-..|+|||+...++++.+..+ 
T Consensus      1146 ~~~eLVTaw~~-----Ls~~~~~~r~~------------~-~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s 1207 (1387)
T KOG1517|consen 1146 KKPELVTAWSS-----LSDQLPGARGT------------G-LVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGS 1207 (1387)
T ss_pred             CCceeEEeecc-----ccccCccCCCC------------C-eeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCC
Confidence               12221111     11111112111            1 34677776666776666889999999988888877653 


Q ss_pred             -CCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEecccc---ceEEEccCCCCC--eEEEEEecCCCE-EE
Q psy10063        518 -RPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFGP--INSLAFHPDGKS-YA  589 (894)
Q Consensus       518 -~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~---~~~~~l~~h~~~--V~~l~~spdg~~-l~  589 (894)
                       ..|.++.-+- .|..|++|..||.              ||+||.+..   ..+...+.|...  |..+.+-+.|-. |+
T Consensus      1208 ~t~vTaLS~~~~~gn~i~AGfaDGs--------------vRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elv 1273 (1387)
T KOG1517|consen 1208 STLVTALSADLVHGNIIAAGFADGS--------------VRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELV 1273 (1387)
T ss_pred             CccceeecccccCCceEEEeecCCc--------------eEEeecccCCccccceeecccCCcccceeEEeecCCCccee
Confidence             4455555433 3689999999998              777776643   245566778877  999999887654 99


Q ss_pred             EEeCCCcEEEEECCCC
Q psy10063        590 SGGEDGFLISNTLSNG  605 (894)
Q Consensus       590 sgs~Dg~I~vwdl~~~  605 (894)
                      +|+.||.|++||++..
T Consensus      1274 Sgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1274 SGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred             eeccCCeEEEEecccC
Confidence            9999999999999874

>KOG1272|consensus

Probab=99.36  E-value=1.5e-12  Score=137.42  Aligned_cols=217  Identities=17%  Similarity=0.210  Sum_probs=176.2

Q ss_pred             ceeeeeccCccEEEecCCCeEEEEEe----------cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC
Q psy10063        381 DRLNSMSPAARKLATNAEPVVKMQVT----------DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH  450 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~~~~~~l~----------~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h  450 (894)
                      ...+.++.+|+.|+.++.......|.          .-...|..+.|-...+++|++- ...++|||- .|..++.++.|
T Consensus       132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtElHClk~~  209 (545)
T KOG1272|consen  132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTELHCLKRH  209 (545)
T ss_pred             CeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhh-hceEEEecC-CCcEEeehhhc
Confidence            34457899999988776532221111          1236788889988888888885 458999994 48888888888


Q ss_pred             CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCC
Q psy10063        451 AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPIL  529 (894)
Q Consensus       451 ~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg  529 (894)
                      .                          .|..|.|.|.--+|++++..|.++.-|+..|+++..+.. .+.+..++-.|-.
T Consensus       210 ~--------------------------~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~N  263 (545)
T KOG1272|consen  210 I--------------------------RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYN  263 (545)
T ss_pred             C--------------------------chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCcc
Confidence            6                          377777878777889999999999999999999988875 5788899999999


Q ss_pred             CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc
Q psy10063        530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       530 ~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                      ..+-+|...|.              |.+|.....+++..+..|.++|.+|++.++|+|+++.+.|..|+|||++....+.
T Consensus       264 aVih~GhsnGt--------------VSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~  329 (545)
T KOG1272|consen  264 AVIHLGHSNGT--------------VSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLH  329 (545)
T ss_pred             ceEEEcCCCce--------------EEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccc
Confidence            99999999887              8888888888888889999999999999999999999999999999999876543


Q ss_pred             ---CCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        610 ---EGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       610 ---~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                         .......+++|..|.+.++.+.++..|...
T Consensus       330 t~~tp~~a~~ls~SqkglLA~~~G~~v~iw~d~  362 (545)
T KOG1272|consen  330 TYRTPHPASNLSLSQKGLLALSYGDHVQIWKDA  362 (545)
T ss_pred             eeecCCCccccccccccceeeecCCeeeeehhh
Confidence               234456678888888888888888888753

>KOG0322|consensus

Probab=99.35  E-value=4.6e-12  Score=124.88  Aligned_cols=166  Identities=18%  Similarity=0.268  Sum_probs=124.0

Q ss_pred             CCCCEEEEEEcc-CCC--EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        408 QSAKITSLLWGN-LDQ--YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       408 H~~~V~~l~~sp-dg~--~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ..+.|.|..|.. ++.  +|+.|.++|.|.+||+.++..+..|+.... .+..++-+.              .+|.++.|
T Consensus       149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~k-v~~~~ash~--------------qpvlsldy  213 (323)
T KOG0322|consen  149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSK-VESPNASHK--------------QPVLSLDY  213 (323)
T ss_pred             ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccc-cccchhhcc--------------Ccceeeee
Confidence            346777777544 333  567788899999999999855554443222 111111111              16777777


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCC--CcEE--EEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        485 SKDATMFITASKDHTAKLFTTHD--RQLL--KTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~--~~~~--~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      .+.-..=++|+.+..+..|.+..  +.+.  ..+.. .-.|..+.+-||++.|++++.|+.              ||||.
T Consensus       214 as~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~R--------------iRVys  279 (323)
T KOG0322|consen  214 ASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHR--------------IRVYS  279 (323)
T ss_pred             chhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCc--------------EEEEE
Confidence            76545557777888888888763  3322  22332 356888999999999999999997              89999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      .++..++..|+-|.+.|.+++|+||...+++++.|++|.+|++
T Consensus       280 wrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  280 WRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             eccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            9999999999999999999999999999999999999999986

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.34  E-value=1.7e-10  Score=132.05  Aligned_cols=186  Identities=18%  Similarity=0.154  Sum_probs=124.3

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ..+..|...+.+++|+|||++|+.+..+   ..|++||+.+++.... ..+..                         .+
T Consensus       183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~-------------------------~~  236 (417)
T TIGR02800       183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPG-------------------------MN  236 (417)
T ss_pred             EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCC-------------------------Cc
Confidence            3455677789999999999999887643   4799999998865433 23333                         23


Q ss_pred             EEEEEecCCCEEEE-EECC--CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        480 NDMQFSKDATMFIT-ASKD--HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       480 ~~l~~spdg~~L~s-gs~D--g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .+++|+|||+.|+. .+.+  ..|++||+.+++......+.......+|+|||++|++.+..+..           ..|.
T Consensus       237 ~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~-----------~~iy  305 (417)
T TIGR02800       237 GAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGS-----------PQIY  305 (417)
T ss_pred             cceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCC-----------ceEE
Confidence            44556666665543 2333  35888999888766555555555678999999999887754321           1367


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC---cEEEEECCCCccc--cCCCceeeeEECcCCcEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG---FLISNTLSNGLDI--SEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg---~I~vwdl~~~~~~--~~~~~v~~~~~spdg~~l  626 (894)
                      ++++..++. ..+..+...+..+.|+|+|++|+.++.++   .|.+||+..+...  ..........|+|+|..+
T Consensus       306 ~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~p~~spdg~~l  379 (417)
T TIGR02800       306 MMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTGLDESPSFAPNGRMI  379 (417)
T ss_pred             EEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCCCCCCceECCCCCEE
Confidence            778776654 34444556678889999999999888776   7888998765422  222223344667766544

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.34  E-value=3.5e-10  Score=128.64  Aligned_cols=118  Identities=10%  Similarity=0.014  Sum_probs=78.4

Q ss_pred             EEEeeCCCCCEEEEec-CCCcEEEEE--ccC-Cce---eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc
Q psy10063        764 FKMPEPPKREKLALAL-ADKVSERYR--DRK-NKA---TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE  836 (894)
Q Consensus       764 ~~la~spdg~~Latgs-~Dg~I~iwd--~~~-~~~---~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~  836 (894)
                      ...+|+|||++|+..+ .+|..+||.  +.. +..   +...........|||||++|+...... |.+.|++||+..++
T Consensus       284 ~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~  362 (428)
T PRK01029        284 GNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGR  362 (428)
T ss_pred             CCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCC-CCcEEEEEECCCCC
Confidence            3467889998877654 456555554  321 111   222223345778999999999877653 44579999999887


Q ss_pred             eeeeccCCCCCeeEEEEeeCCcEEEEecC---CCcEEEEecCcccccccc
Q psy10063        837 EFARIKGHFGPINSLAFHPDGKSYASGGE---DGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       837 ~l~~l~gH~~~V~~l~fSpdg~~LaS~s~---Dg~V~vWdl~~~~~~~~~  883 (894)
                      ... +..+...+..+.|+|||++|+..+.   ++.|++|++++++....+
T Consensus       363 ~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt  411 (428)
T PRK01029        363 DYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV  411 (428)
T ss_pred             eEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence            643 4333456778999999998875432   357889999877654443

>KOG1334|consensus

Probab=99.33  E-value=1.2e-11  Score=131.33  Aligned_cols=253  Identities=16%  Similarity=0.248  Sum_probs=176.7

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .|..|.|...|.+|++|+.|..|.+||...++.+..|..  ..-|....|-|.  .+-|+..+.++.+++-.+.      
T Consensus       144 cVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~------  217 (559)
T KOG1334|consen  144 CVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL------  217 (559)
T ss_pred             ccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeec------
Confidence            788888999999999999999999999999988887763  355666667664  4678888888885442211      


Q ss_pred             eEEEEeccccce--EEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063        554 DARFYHLIFEEE--FARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       554 ~v~vwd~~~~~~--~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~  630 (894)
                             .++.+  ...+..|.+.|.-++..|+.. -|+++++|+.+.-+|++.+....              +      
T Consensus       218 -------~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~--------------~------  270 (559)
T KOG1334|consen  218 -------ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE--------------K------  270 (559)
T ss_pred             -------cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccc--------------e------
Confidence                   11222  345667999999999999765 58899999999999886543110              0      


Q ss_pred             CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063        631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM  710 (894)
Q Consensus       631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  710 (894)
                                         +. ++..+..                                                   
T Consensus       271 -------------------~~-cr~~~~~---------------------------------------------------  279 (559)
T KOG1334|consen  271 -------------------FV-CREADEK---------------------------------------------------  279 (559)
T ss_pred             -------------------ee-eeccCCc---------------------------------------------------
Confidence                               00 0000000                                                   


Q ss_pred             EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEEecCCCcEEEEEc
Q psy10063        711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALALADKVSERYRD  789 (894)
Q Consensus       711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs~Dg~I~iwd~  789 (894)
                                                               .       .-..+.|+..|... +|++|+.|..+++||.
T Consensus       280 -----------------------------------------~-------~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~  311 (559)
T KOG1334|consen  280 -----------------------------------------E-------RVGLYTIAVDPRNTNEFAVGGSDQFARVYDQ  311 (559)
T ss_pred             -----------------------------------------c-------ceeeeeEecCCCCccccccCChhhhhhhhcc
Confidence                                                     0       00124566666644 7899999999999997


Q ss_pred             cCCcee------e---------ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC--c----------ceeee-c
Q psy10063        790 RKNKAT------A---------GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF--E----------EEFAR-I  841 (894)
Q Consensus       790 ~~~~~~------~---------~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t--g----------~~l~~-l  841 (894)
                      +.....      .         .....+..++|+.++..|+++..+.    .|++|.-.-  |          ..+.. +
T Consensus       312 R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe----~IYLF~~~~~~G~~p~~~s~~~~~~k~vY  387 (559)
T KOG1334|consen  312 RRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDE----DIYLFNKSMGDGSEPDPSSPREQYVKRVY  387 (559)
T ss_pred             cchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeeccc----ceEEeccccccCCCCCCCcchhhccchhh
Confidence            654321      1         1223466888999998888887776    489995432  2          22333 7


Q ss_pred             cCCCC--CeeEEEE-eeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063        842 KGHFG--PINSLAF-HPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       842 ~gH~~--~V~~l~f-Spdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      +||..  .|..|-| -|...|+++||+-|.|.||+-.+++++..++-.
T Consensus       388 KGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegD  435 (559)
T KOG1334|consen  388 KGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGD  435 (559)
T ss_pred             cccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcc
Confidence            89964  4777754 578899999999999999999999988877643

>KOG0974|consensus

Probab=99.31  E-value=4.5e-10  Score=130.05  Aligned_cols=147  Identities=20%  Similarity=0.279  Sum_probs=121.6

Q ss_pred             EccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC
Q psy10063        417 WGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK  496 (894)
Q Consensus       417 ~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~  496 (894)
                      ++++.=++++|+.-+.|.+|+......-..+.+|.+                         .|.++.|+-||++++++|+
T Consensus       141 ~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG-------------------------~iF~i~~s~dg~~i~s~Sd  195 (967)
T KOG0974|consen  141 DSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG-------------------------SIFSIVTSLDGRYIASVSD  195 (967)
T ss_pred             ccCcEEEEEeccccccEEEEeccccCCcceecccCC-------------------------ceEEEEEccCCcEEEEEec
Confidence            344555889999999999999874443346788887                         7888999999999999999


Q ss_pred             CCCEEEEEcCCCcEEE--EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC
Q psy10063        497 DHTAKLFTTHDRQLLK--TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  574 (894)
Q Consensus       497 Dg~V~iwdl~~~~~~~--~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~  574 (894)
                      |..+|+|++++++.+.  .|.|..+|+.++|.|.  +|++++.|-.              .++|+.. +..+..+.+|.+
T Consensus       196 DRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedct--------------crvW~~~-~~~l~~y~~h~g  258 (967)
T KOG0974|consen  196 DRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCT--------------CRVWGVN-GTQLEVYDEHSG  258 (967)
T ss_pred             CcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceE--------------EEEEecc-cceehhhhhhhh
Confidence            9999999999988765  5667899999999998  8999998887              6677544 455557777765


Q ss_pred             -CeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        575 -PINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       575 -~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                       .++.++..++...+++++.||.+++|++...
T Consensus       259 ~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  259 KGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             cceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence             7899999998889999999999999998654

>KOG2111|consensus

Probab=99.31  E-value=5.3e-10  Score=113.53  Aligned_cols=161  Identities=12%  Similarity=0.157  Sum_probs=121.5

Q ss_pred             CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEE------EEeCCCCc------------cceEEEEEecCCCEEE
Q psy10063        431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI------TASHSQAV------------EPINDMQFSKDATMFI  492 (894)
Q Consensus       431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la------~~~~d~~i------------~~V~~l~~spdg~~L~  492 (894)
                      ..|.|||=...+++.++....  +|.+|.++++.-.++      +-......            +.+++++-.-...+||
T Consensus        75 NkviIWDD~k~~~i~el~f~~--~I~~V~l~r~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~La  152 (346)
T KOG2111|consen   75 NKVIIWDDLKERCIIELSFNS--EIKAVKLRRDRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLA  152 (346)
T ss_pred             ceEEEEecccCcEEEEEEecc--ceeeEEEcCCeEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEE
Confidence            359999977788888887655  799999987642222      11111111            2333333333444455


Q ss_pred             EEE-CCCCEEEEEcCCCcE---EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        493 TAS-KDHTAKLFTTHDRQL---LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       493 sgs-~Dg~V~iwdl~~~~~---~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      .-+ .-|.|+|-|+..-+.   .....|+..|.|+++..+|.+||+++..|.+             |||||.+.|..+.+
T Consensus       153 fPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTL-------------IRIFdt~~g~~l~E  219 (346)
T KOG2111|consen  153 FPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTL-------------IRIFDTEDGTLLQE  219 (346)
T ss_pred             cCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEE-------------EEEEEcCCCcEeee
Confidence            433 458999999987655   4555588999999999999999999999986             99999999999998


Q ss_pred             ccC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        569 IKG--HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       569 l~~--h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ++.  ....|+||+|+|++.+|+++|..|+|+||.++...
T Consensus       220 ~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  220 LRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             eecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence            853  45689999999999999999999999999997644

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.31  E-value=6.3e-11  Score=119.41  Aligned_cols=122  Identities=14%  Similarity=0.163  Sum_probs=92.7

Q ss_pred             CCCceEEEeeCCCCCEEEE--ecCCCcEEEEEccCCceeecccc-CCCceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        759 PVDIGFKMPEPPKREKLAL--ALADKVSERYRDRKNKATAGFLL-SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       759 h~~~v~~la~spdg~~Lat--gs~Dg~I~iwd~~~~~~~~~~~~-~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      ..+.|.+++|+|+|..||+  |..++.|.|||++ .+.+..+.. ....+.|+|+|+++++++.... ...|++||++..
T Consensus        58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~-~G~l~~wd~~~~  135 (194)
T PF08662_consen   58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQPRNTISWSPDGRFLVLAGFGNL-NGDLEFWDVRKK  135 (194)
T ss_pred             CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecCCCceEEEECCCCCEEEEEEccCC-CcEEEEEECCCC
Confidence            3456999999999998765  4467799999997 555444433 3457889999999999875432 125999999988


Q ss_pred             ceeeeccCCCCCeeEEEEeeCCcEEEEec------CCCcEEEEecCcccccccccc
Q psy10063        836 EEFARIKGHFGPINSLAFHPDGKSYASGG------EDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       836 ~~l~~l~gH~~~V~~l~fSpdg~~LaS~s------~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      +.+..++ |. .+..++|+|||++|+++.      .|..++||++.+. ++++..+
T Consensus       136 ~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~-~l~~~~~  188 (194)
T PF08662_consen  136 KKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR-LLYKKPF  188 (194)
T ss_pred             EEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe-EeEecch
Confidence            8887765 33 478999999999999976      4788999999755 5555443

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.30  E-value=1.3e-08  Score=124.66  Aligned_cols=183  Identities=17%  Similarity=0.150  Sum_probs=130.3

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEE----ecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTW----DLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iW----d~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------  476 (894)
                      ..+.|.++.|-++...|+.+..+|.|.+.    +....+  .++.|.-+.+|.+++||||+..|+.+..++.+       
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~--~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f  151 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE--IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDF  151 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce--eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence            45789999999999999999999999999    544332  22222222389999999999999988877655       


Q ss_pred             -----------------------------------c-----------------------ceEEEEEecCCCEEEEEEC--
Q psy10063        477 -----------------------------------E-----------------------PINDMQFSKDATMFITASK--  496 (894)
Q Consensus       477 -----------------------------------~-----------------------~V~~l~~spdg~~L~sgs~--  496 (894)
                                                         +                       .-..|+|-.||++||+.+.  
T Consensus       152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~  231 (928)
T PF04762_consen  152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEP  231 (928)
T ss_pred             eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEc
Confidence                                               0                       2346789999999998874  


Q ss_pred             -C---CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc---ccceEEE
Q psy10063        497 -D---HTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI---FEEEFAR  568 (894)
Q Consensus       497 -D---g~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~---~~~~~~~  568 (894)
                       .   ..||||+-+ |++....+. .+--.+++|.|.|.+|++.-....           ..+|.+|.-.   .|+....
T Consensus       232 ~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~-----------~~~VvFfErNGLrhgeF~l~  299 (928)
T PF04762_consen  232 ETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPD-----------RHDVVFFERNGLRHGEFTLR  299 (928)
T ss_pred             CCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCC-----------CcEEEEEecCCcEeeeEecC
Confidence             2   468999855 665555443 344568999999999988765222           1235666522   2222222


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +......|..|+|+.|+..|+..-.|. |.+|-....
T Consensus       300 ~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY  335 (928)
T PF04762_consen  300 FDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY  335 (928)
T ss_pred             CCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC
Confidence            334566899999999999999877665 999977654

>KOG3881|consensus

Probab=99.30  E-value=2.1e-10  Score=119.38  Aligned_cols=168  Identities=20%  Similarity=0.313  Sum_probs=130.9

Q ss_pred             CEEEEEEccCCC-EEEEecCC--CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        411 KITSLLWGNLDQ-YIITGHAK--GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       411 ~V~~l~~spdg~-~L~sgs~D--g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .+..|.-++... ++++|+..  ..+.|||++..+.+..-+.-.. .-..|.+-               -.+.++.|-++
T Consensus       150 g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn-D~L~LrVP---------------vW~tdi~Fl~g  213 (412)
T KOG3881|consen  150 GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN-DRLGLRVP---------------VWITDIRFLEG  213 (412)
T ss_pred             ceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC-ccccceee---------------eeeccceecCC
Confidence            344444454333 56668888  7899999998865544433222 11111110               04677888886


Q ss_pred             --CCEEEEEECCCCEEEEEcCCC-cEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        488 --ATMFITASKDHTAKLFTTHDR-QLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       488 --g~~L~sgs~Dg~V~iwdl~~~-~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                        ...||++..-+.||+||.+.+ +++..|.. ..++.++...|+|..|+++...+.              +..+|++.+
T Consensus       214 ~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~--------------l~~FD~r~~  279 (412)
T KOG3881|consen  214 SPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQ--------------LAKFDLRGG  279 (412)
T ss_pred             CCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccch--------------hheecccCc
Confidence              789999999999999999865 46677775 689999999999999999998886              889999999


Q ss_pred             ceEEE-ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        564 EEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       564 ~~~~~-l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      +.+.. +++..+.|.+|..+|.+++|++|+.|..|||+|+++.+.+
T Consensus       280 kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll  325 (412)
T KOG3881|consen  280 KLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLL  325 (412)
T ss_pred             eeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhh
Confidence            98877 8899999999999999999999999999999999986544

>KOG1354|consensus

Probab=99.29  E-value=2.4e-10  Score=116.71  Aligned_cols=111  Identities=9%  Similarity=0.084  Sum_probs=80.0

Q ss_pred             eEEEeeCCC-CCEEEEecCCCcEEEEEccCCceee-------------------ccccCCCceEeecCCCeEEEEecCCC
Q psy10063        763 GFKMPEPPK-REKLALALADKVSERYRDRKNKATA-------------------GFLLSCPDFLFDFDTTREVTTTSTKV  822 (894)
Q Consensus       763 v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~-------------------~~~~~~~~~~fS~dg~~l~~as~d~~  822 (894)
                      |.+..|+|. ...|+..+..|.|+|-|++...++.                   ++...+.++.|+..|+++++-.--  
T Consensus       216 ITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyl--  293 (433)
T KOG1354|consen  216 ITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYL--  293 (433)
T ss_pred             HhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccc--
Confidence            344556665 5678888999999999987433321                   222456678899999999874433  


Q ss_pred             CceeEEEeec-CCcceeeeccCCC------------CCe---eEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        823 GKFDARFYHL-IFEEEFARIKGHF------------GPI---NSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       823 g~~~I~vwd~-~tg~~l~~l~gH~------------~~V---~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                         .|+|||+ ...+.+..+..|.            +.|   ..++|+-++.++++||....++|+++..+.
T Consensus       294 ---tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  294 ---TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             ---eeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence               5999999 4556666665553            222   358899999999999999999999976654

>KOG2041|consensus

Probab=99.29  E-value=1.4e-09  Score=120.07  Aligned_cols=433  Identities=12%  Similarity=0.116  Sum_probs=242.0

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---------------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---------------ELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---------------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .....|++|.....+|++|+.||.++|..+.+..               .-+.+.||.. .|.-+.|....+.|-+...+
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~-sV~vvTWNe~~QKLTtSDt~   92 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNA-SVMVVTWNENNQKLTTSDTS   92 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcc-eEEEEEeccccccccccCCC
Confidence            4567899999999999999999999999886431               1366889998 99999999888887777777


Q ss_pred             CCc--------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEE
Q psy10063        474 QAV--------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVV  533 (894)
Q Consensus       474 ~~i--------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~  533 (894)
                      |-|                    ..|.+|+|.-||..|+....||.|.|=.++..+....--.......+.|++|.+.++
T Consensus        93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~L  172 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQAL  172 (1189)
T ss_pred             ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHHH
Confidence            765                    478999999999999999999999887776544432111122345788999999988


Q ss_pred             EEECCCCeEEEeccCccceeeEEEE--eccccceEEEccCCCCCeEEEEEe--------cCCCEEEEEeCCCcEEEEECC
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH--------PDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vw--d~~~~~~~~~l~~h~~~V~~l~~s--------pdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      .+-..|...+++.+....   +++-  ....+.-  .+......|-.+.|.        ||...|+.+-..|.+.|.+-.
T Consensus       173 f~~ange~hlydnqgnF~---~Kl~~~c~Vn~tg--~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~e  247 (1189)
T KOG2041|consen  173 FKKANGETHLYDNQGNFE---RKLEKDCEVNGTG--IFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSE  247 (1189)
T ss_pred             hhhcCCcEEEecccccHH---HhhhhceEEeeee--eecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhc
Confidence            888888744443332211   1100  0000000  111112234555553        466789999889998887655


Q ss_pred             CCc---cccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCC
Q psy10063        604 NGL---DISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHS  680 (894)
Q Consensus       604 ~~~---~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~  680 (894)
                      ...   .+..+-.+....|.++|.+++..+-.......     .+           ...|.+...-...    .-.+...
T Consensus       248 ND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~-----~d-----------~n~v~Fysp~G~i----~gtlkvp  307 (1189)
T KOG2041|consen  248 NDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEP-----TD-----------SNKVHFYSPYGHI----VGTLKVP  307 (1189)
T ss_pred             CCCCCeEEecccEeecceecCCCcEEEEccCcccccCc-----cc-----------cceEEEeccchhh----eEEEecC
Confidence            443   22346667778899999888554433222210     11           1112221100000    0001122


Q ss_pred             CCeEEeeccCC-cceeEeccCcceeEEeee--EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceec
Q psy10063        681 GTRLHVNPFDE-QQSVELTKDEQIEMARNR--MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA  757 (894)
Q Consensus       681 g~~~~~~~~~~-~~~~~~s~~~~~~~~~~~--~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~  757 (894)
                      |.++....|.+ ...+++..++.+.....+  +.+..-...+++.-..  .....+.+.+|+......+      +    
T Consensus       308 g~~It~lsWEg~gLriA~AvdsfiyfanIRP~ykWgy~e~TvVy~y~~--~e~p~y~i~Fwdtk~nek~------v----  375 (1189)
T KOG2041|consen  308 GSCITGLSWEGTGLRIAIAVDSFIYFANIRPEYKWGYIEETVVYVYQK--EELPQYGIMFWDTKTNEKT------V----  375 (1189)
T ss_pred             CceeeeeEEcCCceEEEEEecceEEEEeecccceEEEeeeEEEEEEcc--CCCcceEEEEEecccChhh------h----
Confidence            33333333321 122233333333222210  1111111111111000  1112233444543322211      1    


Q ss_pred             CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC-Cceeeccc--------c-----CCCceEeecCCCeEEEEecCCCC
Q psy10063        758 GPVDIGFKMPEPPKREKLALALADKVSERYRDRK-NKATAGFL--------L-----SCPDFLFDFDTTREVTTTSTKVG  823 (894)
Q Consensus       758 ~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~-~~~~~~~~--------~-----~~~~~~fS~dg~~l~~as~d~~g  823 (894)
                      .......+|++..+.-.|+.-..|+.|.-+.... ...+....        .     .+...-....+..++.++.+.  
T Consensus       376 K~V~~~~~~a~~~ehCvL~~~~d~~~i~e~s~le~~~~~~~l~LCNSIGT~lD~kytdirP~Fv~vn~~~vviAS~e~--  453 (1189)
T KOG2041|consen  376 KTVTHFENMAFYREHCVLINRQDDGVIPEYSTLENRSRVYFLQLCNSIGTSLDYKYTDIRPKFVCVNGICVVIASEER--  453 (1189)
T ss_pred             hhhcceeehheecccEEEEeccccCCCcchhhhhcccceEEEeeecccCCcCCCCcceeeeeEEEecceEEEEecccc--
Confidence            1112345777777777788888888776663211 11111000        0     011112455777888888774  


Q ss_pred             ceeEEEeecCCcce--------------------------------eeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        824 KFDARFYHLIFEEE--------------------------------FARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       824 ~~~I~vwd~~tg~~--------------------------------l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                         +++|.....+.                                ...+.|..++|.+|+.+  .++|+.+-+.|.|.-
T Consensus       454 ---~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~~DpICAl~~s--dk~l~vareSG~I~r  528 (1189)
T KOG2041|consen  454 ---YFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGSKDPICALCIS--DKFLMVARESGGIYR  528 (1189)
T ss_pred             ---EEEEEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccCCCcceeeeec--ceEEEEEeccCceEE
Confidence               78887532211                                02344556778777776  688999999999999


Q ss_pred             EecCccccccccccC
Q psy10063        872 HTFDQAYFDYTFDIS  886 (894)
Q Consensus       872 Wdl~~~~~~~~~~~~  886 (894)
                      |.+....+..++.+.
T Consensus       529 ySl~nv~l~n~y~~n  543 (1189)
T KOG2041|consen  529 YSLNNVVLTNSYPVN  543 (1189)
T ss_pred             EEecceeeeeccccC
Confidence            999887777666543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.29  E-value=3.5e-10  Score=129.87  Aligned_cols=186  Identities=15%  Similarity=0.092  Sum_probs=119.2

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ..+..|...+.+.+|+|||++|+..+.+   ..|.+||+.+|+... +....+ .                        +
T Consensus       192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g-~------------------------~  245 (430)
T PRK00178        192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEG-L------------------------N  245 (430)
T ss_pred             eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCC-C------------------------c
Confidence            3455677889999999999998876543   369999998886543 332222 2                        2


Q ss_pred             EEEEEecCCCEEEE-EECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        480 NDMQFSKDATMFIT-ASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       480 ~~l~~spdg~~L~s-gs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      ...+|+|||++|+. .+.+|  .|++||+.+++..+...+........|+|||+.|++.+..+.           ...|.
T Consensus       246 ~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g-----------~~~iy  314 (430)
T PRK00178        246 GAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGG-----------KPQIY  314 (430)
T ss_pred             CCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCC-----------CceEE
Confidence            33455555555543 23333  588889998876654444555677899999999988765432           12377


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-C--cEEEEECCCCccc--cCCCceeeeEECcCCcEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-G--FLISNTLSNGLDI--SEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D-g--~I~vwdl~~~~~~--~~~~~v~~~~~spdg~~l  626 (894)
                      ++++..++..+ +..........+|+|||++|+..+.+ +  .|.+||+.+++..  ..........|+|+|+++
T Consensus       315 ~~d~~~g~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spdg~~i  388 (430)
T PRK00178        315 KVNVNGGRAER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPNGTML  388 (430)
T ss_pred             EEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCCCCCCceECCCCCEE
Confidence            77877666433 22222234467899999999877653 3  4788898876522  222223345677777655

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.29  E-value=1.4e-08  Score=112.64  Aligned_cols=158  Identities=15%  Similarity=0.104  Sum_probs=102.0

Q ss_pred             CCCCEEEEEEccCCCEEEEecC----CCcEEEEecCCC--eE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        408 QSAKITSLLWGNLDQYIITGHA----KGDICTWDLRMG--RE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~----Dg~I~iWd~~tg--~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      -......|+++|++++|++...    ++.|..|++...  ++  +........                         ..
T Consensus        35 ~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~-------------------------~p   89 (345)
T PF10282_consen   35 EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGS-------------------------SP   89 (345)
T ss_dssp             ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSS-------------------------CE
T ss_pred             CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCC-------------------------Cc
Confidence            4556677889999999988865    467888887653  32  222221111                         45


Q ss_pred             EEEEEecCCCEEEEEEC-CCCEEEEEcCC-CcEEEE---EeC-----------CCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        480 NDMQFSKDATMFITASK-DHTAKLFTTHD-RQLLKT---YTT-----------ERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~-Dg~V~iwdl~~-~~~~~~---~~~-----------~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                      +.|+++|++++|+++.. +|.|.++++.. |++...   +.+           .....++.|+|+|++|++.......  
T Consensus        90 ~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~--  167 (345)
T PF10282_consen   90 CHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADR--  167 (345)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTE--
T ss_pred             EEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCE--
Confidence            67778888888877764 78899999876 444332   221           2457899999999999987654432  


Q ss_pred             EeccCccceeeEEEEeccccc--eE--EEcc-CCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECC
Q psy10063        544 TTTSTKVGKFDARFYHLIFEE--EF--ARIK-GHFGPINSLAFHPDGKSYASGG-EDGFLISNTLS  603 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~--~~--~~l~-~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~  603 (894)
                                 |++|++....  ..  ..+. ......+.++|+|+|++++... .++.|.+|++.
T Consensus       168 -----------v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~  222 (345)
T PF10282_consen  168 -----------VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD  222 (345)
T ss_dssp             -----------EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             -----------EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence                       6666665443  21  1222 2344678999999999876665 46778888775

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2314|consensus

Probab=99.27  E-value=1.3e-09  Score=117.65  Aligned_cols=338  Identities=12%  Similarity=0.099  Sum_probs=186.9

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE
Q psy10063        413 TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI  492 (894)
Q Consensus       413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~  492 (894)
                      +-+.|||.|.||++--..| |.+|--..-..+++|. |.  .|.-+.|||..+||++-+....+     +.  ++     
T Consensus       214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp--~Vq~idfSP~EkYLVT~s~~p~~-----~~--~~-----  277 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP--GVQFIDFSPNEKYLVTYSPEPII-----VE--ED-----  277 (698)
T ss_pred             eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC--CceeeecCCccceEEEecCCccc-----cC--cc-----
Confidence            5688999999999987665 8999755555555554 55  58888888888888776653221     11  11     


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeC--C-CC-eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTT--E-RP-VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~--~-~~-v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                       -.....|+|||+++|.+.+.|..  . .. -.-+.||.|+++++....++               |.||+..+..++..
T Consensus       278 -d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~s---------------isIyEtpsf~lld~  341 (698)
T KOG2314|consen  278 -DNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNS---------------ISIYETPSFMLLDK  341 (698)
T ss_pred             -cCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccce---------------EEEEecCceeeecc
Confidence             12335799999999999988875  2 22 24568999999999988866               67777665433332


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEECCCCccccCCCce----eeeEECcCCcEEEecCCeEEEEecc
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGED-----GFLISNTLSNGLDISEGSFT----SSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~D-----g~I~vwdl~~~~~~~~~~~v----~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      -.-.-..|....|+|-+..||.-...     ..+-+..+..++.++....+    ..+.|...|.+++        +...
T Consensus       342 Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLc--------vkvd  413 (698)
T KOG2314|consen  342 KSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLC--------VKVD  413 (698)
T ss_pred             cccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEE--------EEEE
Confidence            22345578889999998877754321     23555555555444322111    1233444444431        1110


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                      ......    +-|.   -..+.+.                        ......+....  -.+......+++.|.|..+
T Consensus       414 R~tK~~----~~g~---f~n~eIf------------------------rireKdIpve~--velke~vi~FaWEP~gdkF  460 (698)
T KOG2314|consen  414 RHTKSK----VKGQ---FSNLEIF------------------------RIREKDIPVEV--VELKESVIAFAWEPHGDKF  460 (698)
T ss_pred             eecccc----ccce---EeeEEEE------------------------EeeccCCCcee--eecchheeeeeeccCCCeE
Confidence            000000    0000   0001111                        00100000000  0111222446778888888


Q ss_pred             EecccCccccccCCcceeeccc-cCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe---cCCCcEEEEEccCCcee
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHI-EGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA---LADKVSERYRDRKNKAT  795 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~-~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg---s~Dg~I~iwd~~~~~~~  795 (894)
                      ++......    ...+.+++.+ ....+++      +..-.......+.|+|.|++++.+   +..|.+.+||..-..+.
T Consensus       461 ~vi~g~~~----k~tvsfY~~e~~~~~~~l------Vk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k  530 (698)
T KOG2314|consen  461 AVISGNTV----KNTVSFYAVETNIKKPSL------VKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLK  530 (698)
T ss_pred             EEEEcccc----ccceeEEEeecCCCchhh------hhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhh
Confidence            77543322    1223333222 1111111      111122345678999999999865   56788999997742221


Q ss_pred             ecc---ccCCCceEeecCCCeEEEEecCCCCc--eeEEEeecC
Q psy10063        796 AGF---LLSCPDFLFDFDTTREVTTTSTKVGK--FDARFYHLI  833 (894)
Q Consensus       796 ~~~---~~~~~~~~fS~dg~~l~~as~d~~g~--~~I~vwd~~  833 (894)
                      ..-   ......+-|.|.|+++++++.....+  ...+||+++
T Consensus       531 ~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq  573 (698)
T KOG2314|consen  531 DTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ  573 (698)
T ss_pred             hccCccccccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence            111   12234667999999999887653211  125778876

>KOG2041|consensus

Probab=99.25  E-value=3.2e-09  Score=117.37  Aligned_cols=200  Identities=16%  Similarity=0.213  Sum_probs=132.0

Q ss_pred             CCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec-CCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        397 AEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS-GHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       397 ~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~-~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      +.-.+-..|.||.+.|.-+.|....+.|-+...+|.|.||-+-.|....+.. ...++-|.+++|..||..|+.+-.||.
T Consensus        59 snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGa  138 (1189)
T KOG2041|consen   59 SNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGA  138 (1189)
T ss_pred             cccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCC
Confidence            3334445889999999999999999999999999999999998776543322 223337899999999999887777765


Q ss_pred             c-----------------cceEEEEEecCCCEEEEEECCCCEEEEEcC--------------------------------
Q psy10063        476 V-----------------EPINDMQFSKDATMFITASKDHTAKLFTTH--------------------------------  506 (894)
Q Consensus       476 i-----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~--------------------------------  506 (894)
                      +                 .....+.|++|.++++.+-..|.+++||.+                                
T Consensus       139 vIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~  218 (1189)
T KOG2041|consen  139 VIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWN  218 (1189)
T ss_pred             EEEEeeccceecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeec
Confidence            5                 122345556655555555555555555533                                


Q ss_pred             -----------------------------CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        507 -----------------------------DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       507 -----------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                                                   ....-..+..+-.+..+.|+++|..|+++|.+....-     ....-.|.+
T Consensus       219 ~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~-----~~d~n~v~F  293 (1189)
T KOG2041|consen  219 TGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADE-----PTDSNKVHF  293 (1189)
T ss_pred             cCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccC-----ccccceEEE
Confidence                                         2221222222345677889999999999987653100     000011445


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      |.. -|+.+..|+.....|.+++|...|-.++.+ .|+.|++=+++
T Consensus       294 ysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~A-vdsfiyfanIR  337 (1189)
T KOG2041|consen  294 YSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDSFIYFANIR  337 (1189)
T ss_pred             ecc-chhheEEEecCCceeeeeEEcCCceEEEEE-ecceEEEEeec
Confidence            543 377788888888899999998766655544 35666655554

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=7.2e-10  Score=127.11  Aligned_cols=184  Identities=13%  Similarity=0.100  Sum_probs=114.4

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      +..+...+.+.+|||||++|+..+.+   ..|++||+.+++.... ....+ .                        ...
T Consensus       213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l-t~~~g-~------------------------~~~  266 (448)
T PRK04792        213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV-TSFPG-I------------------------NGA  266 (448)
T ss_pred             eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe-cCCCC-C------------------------cCC
Confidence            44456678899999999988876543   3588999988765332 22222 1                        223


Q ss_pred             EEEecCCCEEEE-EECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        482 MQFSKDATMFIT-ASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       482 l~~spdg~~L~s-gs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      .+|+|||+.|+. .+.+|  .|++||+.+++..+...+.......+|+|||++|++.+..+.           ..+|.++
T Consensus       267 ~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g-----------~~~Iy~~  335 (448)
T PRK04792        267 PRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGG-----------KPQIYRV  335 (448)
T ss_pred             eeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCC-----------CceEEEE
Confidence            455666665543 34445  477889888876655545556678899999999988765432           1237777


Q ss_pred             eccccceEEEccCCCCCeEEEEEecCCCEEEEEeC-CCc--EEEEECCCCccc--cCCCceeeeEECcCCcEE
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE-DGF--LISNTLSNGLDI--SEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~--I~vwdl~~~~~~--~~~~~v~~~~~spdg~~l  626 (894)
                      |+..++..+ +..+.......+|+|||++|+..+. ++.  |.++|++.++..  ..........|+|+|..+
T Consensus       336 dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~~d~~ps~spdG~~I  407 (448)
T PRK04792        336 NLASGKVSR-LTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTRLDESPSVAPNGTMV  407 (448)
T ss_pred             ECCCCCEEE-EecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCCCCCCceECCCCCEE
Confidence            887766443 2222223446789999999887665 343  555677665421  112222334677777654

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.24  E-value=9.4e-09  Score=109.18  Aligned_cols=120  Identities=13%  Similarity=0.047  Sum_probs=94.5

Q ss_pred             cCCCCceEEEeeCCCCCEEEEecCCC-cEEEEEccCCcee--eccccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        757 AGPVDIGFKMPEPPKREKLALALADK-VSERYRDRKNKAT--AGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       757 ~~h~~~v~~la~spdg~~Latgs~Dg-~I~iwd~~~~~~~--~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      .+|.+.|.-..+.-+.+-++.|..|| .|.||+.+.++..  ..-...+.++..+++|++++++-...    +|.++|++
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~----el~vidid  431 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRF----ELWVIDID  431 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCce----EEEEEEec
Confidence            35566677677777888899999999 8999998887643  23334456788999999998876543    79999999


Q ss_pred             CcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC----cEEEEecCccccc
Q psy10063        834 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG----FVRLHTFDQAYFD  880 (894)
Q Consensus       834 tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg----~V~vWdl~~~~~~  880 (894)
                      +|.....-+...+-|..+.|+|+++|||-+--+|    .|+|+|++.++..
T Consensus       432 ngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy  482 (668)
T COG4946         432 NGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIY  482 (668)
T ss_pred             CCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEE
Confidence            9987666667778899999999999999887665    6899999886543

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.22  E-value=7.7e-09  Score=116.63  Aligned_cols=145  Identities=14%  Similarity=0.128  Sum_probs=95.7

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT  499 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~  499 (894)
                      ++.+|++++.+|.|..+|..+|+.+..+.....  +                       ...+.  .++..|+.++.++.
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~--~-----------------------~~~p~--v~~~~v~v~~~~g~  116 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLDER--L-----------------------SGGVG--ADGGLVFVGTEKGE  116 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCCCC--c-----------------------ccceE--EcCCEEEEEcCCCE
Confidence            467888998999999999999998876654432  0                       01111  14667888889999


Q ss_pred             EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe---
Q psy10063        500 AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI---  576 (894)
Q Consensus       500 V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V---  576 (894)
                      |..||.++|+++......+.+.+.... .+..++++..++.              |..||.++|+.+-++......+   
T Consensus       117 l~ald~~tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~~g~--------------l~a~d~~tG~~~W~~~~~~~~~~~~  181 (377)
T TIGR03300       117 VIALDAEDGKELWRAKLSSEVLSPPLV-ANGLVVVRTNDGR--------------LTALDAATGERLWTYSRVTPALTLR  181 (377)
T ss_pred             EEEEECCCCcEeeeeccCceeecCCEE-ECCEEEEECCCCe--------------EEEEEcCCCceeeEEccCCCceeec
Confidence            999999999998877655444322221 2456777766665              6677777777665543322111   


Q ss_pred             --EEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        577 --NSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       577 --~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                        .+..+. + ..++.+..+|.|..+|++.++.+
T Consensus       182 ~~~sp~~~-~-~~v~~~~~~g~v~ald~~tG~~~  213 (377)
T TIGR03300       182 GSASPVIA-D-GGVLVGFAGGKLVALDLQTGQPL  213 (377)
T ss_pred             CCCCCEEE-C-CEEEEECCCCEEEEEEccCCCEe
Confidence              111222 2 46778888899999999877644

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.19  E-value=1.2e-07  Score=102.84  Aligned_cols=84  Identities=4%  Similarity=-0.013  Sum_probs=62.5

Q ss_pred             EccCCCEEEEecC----------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        417 WGNLDQYIITGHA----------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       417 ~spdg~~L~sgs~----------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      +||||+.|+.+..          +..|.|||+.+++.+.++....+....            ++      .....++++|
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~------------~~------~~~~~~~ls~  114 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL------------VG------TYPWMTSLTP  114 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh------------cc------CccceEEECC
Confidence            9999998887654          678999999999999888743220000            00      0345678888


Q ss_pred             CCCEEEEEE-C-CCCEEEEEcCCCcEEEEEeCCC
Q psy10063        487 DATMFITAS-K-DHTAKLFTTHDRQLLKTYTTER  518 (894)
Q Consensus       487 dg~~L~sgs-~-Dg~V~iwdl~~~~~~~~~~~~~  518 (894)
                      ||++|+... . +..|-|+|+..++.+..+...+
T Consensus       115 dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~  148 (352)
T TIGR02658       115 DNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD  148 (352)
T ss_pred             CCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC
Confidence            998888765 3 6889999999999999887643

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.17  E-value=1.6e-07  Score=98.06  Aligned_cols=163  Identities=13%  Similarity=0.083  Sum_probs=106.8

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCC---CcEEEEecCC--CeEEEE--ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAK---GDICTWDLRM--GRELES--ISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~D---g~I~iWd~~t--g~~~~~--l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      .+-.+.+.++-|+|+|++++|+++-.+   |.|..|.++.  |++...  ......                        
T Consensus        34 ~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~------------------------   89 (346)
T COG2706          34 QLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGS------------------------   89 (346)
T ss_pred             hhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCC------------------------
Confidence            444577888999999999999988544   5666666653  443211  111111                        


Q ss_pred             cceEEEEEecCCCEEEEEEC-CCCEEEEEcCC-CcE---EEEEeCCCC----------eeEEEEcCCCCEEEEEECCCCe
Q psy10063        477 EPINDMQFSKDATMFITASK-DHTAKLFTTHD-RQL---LKTYTTERP----------VNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~-Dg~V~iwdl~~-~~~---~~~~~~~~~----------v~~l~~spdg~~l~~~~~~~~~  541 (894)
                       .-+.++++++|++|+++.. -|.|.++-++. |.+   +..+.|.+.          +.+..|.|++++|++..-.-. 
T Consensus        90 -~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D-  167 (346)
T COG2706          90 -PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD-  167 (346)
T ss_pred             -CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc-
Confidence             3356666777777666654 36677777754 433   234444333          889999999999988764332 


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEcc---CCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIK---GHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSN  604 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~  604 (894)
                                  .|.+|++..|+....-.   .....-+.|.|+|++++.+... .+++|.+|.++.
T Consensus       168 ------------ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~  222 (346)
T COG2706         168 ------------RIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP  222 (346)
T ss_pred             ------------eEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence                        27888888766433211   2344678999999999877655 588999998865

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.15  E-value=1e-07  Score=99.40  Aligned_cols=111  Identities=5%  Similarity=-0.053  Sum_probs=74.5

Q ss_pred             EEEeeCCCCCEEEEe-cCCCcEEEEEccCC-ce---eeccc---------cCCCceEeecCCCeEEEEecCCCCceeEEE
Q psy10063        764 FKMPEPPKREKLALA-LADKVSERYRDRKN-KA---TAGFL---------LSCPDFLFDFDTTREVTTTSTKVGKFDARF  829 (894)
Q Consensus       764 ~~la~spdg~~Latg-s~Dg~I~iwd~~~~-~~---~~~~~---------~~~~~~~fS~dg~~l~~as~d~~g~~~I~v  829 (894)
                      ..|+|+|++++..+. --+++|.+|..... ..   +..+.         ....++.+++||++|++.-....   .|-+
T Consensus       194 RHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~d---sI~~  270 (346)
T COG2706         194 RHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHD---SIAV  270 (346)
T ss_pred             ceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCC---eEEE
Confidence            467888888887644 45788889887663 11   21111         12346679999999998765543   5777


Q ss_pred             eecCC--cce--eeeccCCCCCeeEEEEeeCCcEEEEecCCC-cEEEEecCcc
Q psy10063        830 YHLIF--EEE--FARIKGHFGPINSLAFHPDGKSYASGGEDG-FVRLHTFDQA  877 (894)
Q Consensus       830 wd~~t--g~~--l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg-~V~vWdl~~~  877 (894)
                      |.+..  |++  +.....|...-+...|.++|++|+.++.|+ .|.||.++..
T Consensus       271 f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         271 FSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             EEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            77653  332  233334555578899999999999988664 6888888644

>KOG4547|consensus

Probab=99.12  E-value=2.3e-09  Score=117.57  Aligned_cols=170  Identities=14%  Similarity=0.220  Sum_probs=132.1

Q ss_pred             cCCCEEEEecCCCcEEEEecCCCeEEEEecCC--CCCCeeEEEE--------------------cCCCCEEEEEeCCCCc
Q psy10063        419 NLDQYIITGHAKGDICTWDLRMGRELESISGH--AKEPINDMQF--------------------SKDATMFITASHSQAV  476 (894)
Q Consensus       419 pdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h--~~~~V~~v~~--------------------spdg~~la~~~~d~~i  476 (894)
                      |-+.|+|....||.+|||+...+++.+.|...  ..+.-.+..|                    +-|-..|+.|...|.+
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            45678999999999999999998887776531  1112222222                    1122334444444333


Q ss_pred             --------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEE
Q psy10063        477 --------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLG  535 (894)
Q Consensus       477 --------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~  535 (894)
                                          +.|.++.++.+-.+|.+++.|+.|.+|+...++.++.+.. ...+.+++++|||+.|+++
T Consensus        83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a  162 (541)
T KOG4547|consen   83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA  162 (541)
T ss_pred             EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec
Confidence                                6889999999999999999999999999999999999986 4678999999999999988


Q ss_pred             ECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecC-----CCEEEEE-eCCCcEEEEECCC
Q psy10063        536 GGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD-----GKSYASG-GEDGFLISNTLSN  604 (894)
Q Consensus       536 ~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd-----g~~l~sg-s~Dg~I~vwdl~~  604 (894)
                      +..                |++||+++++.+..|.||.+.|.+++|--+     |.+|+++ ..+..|.+|-++.
T Consensus       163 s~~----------------ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  163 SRQ----------------IKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             cce----------------EEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            743                999999999999999999999999999876     6676654 4456688887655

>KOG4547|consensus

Probab=99.11  E-value=5.1e-09  Score=114.88  Aligned_cols=106  Identities=18%  Similarity=0.201  Sum_probs=81.2

Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEeC----CCCeeEEEEc------C--------------CCCEEEEEECCCCe
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYTT----ERPVNSAALS------P--------------ILPHVVLGGGQEAR  541 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~----~~~v~~l~~s------p--------------dg~~l~~~~~~~~~  541 (894)
                      +.+.++|....||.+|||+...+++.+.|..    .+...+..|.      |              |-..|+.|...|. 
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~-   81 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS-   81 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc-
Confidence            4567899999999999999999998888763    2334444442      1              1223444444443 


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                                   |.+|++..|+...++.  .|.+.|.++.|+.+-..|.+++.|+.+.+|+....
T Consensus        82 -------------v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~  134 (541)
T KOG4547|consen   82 -------------VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK  134 (541)
T ss_pred             -------------EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc
Confidence                         8889999898888875  59999999999999999999999999999987543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.10  E-value=8.1e-08  Score=120.16  Aligned_cols=117  Identities=10%  Similarity=0.090  Sum_probs=79.2

Q ss_pred             eEEEeeCCCCCEEE-EecCCCcEEEEEccCCceee--c----------------------cccCCCceEeecCCCeEEEE
Q psy10063        763 GFKMPEPPKREKLA-LALADKVSERYRDRKNKATA--G----------------------FLLSCPDFLFDFDTTREVTT  817 (894)
Q Consensus       763 v~~la~spdg~~La-tgs~Dg~I~iwd~~~~~~~~--~----------------------~~~~~~~~~fS~dg~~l~~a  817 (894)
                      ...|+++|++.+|+ +...++.|++||+..+....  .                      .......++++++|...++-
T Consensus       742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD  821 (1057)
T PLN02919        742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD  821 (1057)
T ss_pred             ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence            34677888877444 44556788888876544211  0                      01122467789999855554


Q ss_pred             ecCCCCceeEEEeecCCcceeeec-------------cCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccccc
Q psy10063        818 TSTKVGKFDARFYHLIFEEEFARI-------------KGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       818 s~d~~g~~~I~vwd~~tg~~l~~l-------------~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      ..++    .|++||..++.+....             .++......|+++++|+++++.+.++.|++|+++++.....+
T Consensus       822 s~N~----rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~~~~~  896 (1057)
T PLN02919        822 SYNH----KIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEAAEIL  896 (1057)
T ss_pred             CCCC----EEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCccceeE
Confidence            4444    6999999877654321             123346778999999999999999999999999988764333

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.08  E-value=3.6e-08  Score=111.55  Aligned_cols=179  Identities=11%  Similarity=0.001  Sum_probs=113.6

Q ss_pred             CEEEEEEccCCCE-EEEecC---CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        411 KITSLLWGNLDQY-IITGHA---KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       411 ~V~~l~~spdg~~-L~sgs~---Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      .+....|+|||+. ++..+.   +..|+++|+.+|+..+... ..+ .+....|+|||++|+.....             
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g-~~~~~~~SPDG~~la~~~~~-------------  253 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQG-MLVVSDVSKDGSKLLLTMAP-------------  253 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCC-cEEeeEECCCCCEEEEEEcc-------------
Confidence            7889999999984 665433   3569999998887655443 333 34445555555544332210             


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF  566 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~  566 (894)
                              ..+..|.++|+..++..+...+........|+|||+.|+..+..+.           ..+|.++|+..++..
T Consensus       254 --------~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g-----------~~~Iy~~dl~~g~~~  314 (419)
T PRK04043        254 --------KGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLG-----------YPNIFMKKLNSGSVE  314 (419)
T ss_pred             --------CCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCC-----------CceEEEEECCCCCeE
Confidence                    1235688889888876554444443456789999999998876532           124788888877664


Q ss_pred             EEccCCCCCeEEEEEecCCCEEEEEeCC---------CcEEEEECCCCcc--ccCCCceeeeEECcCCcEE
Q psy10063        567 ARIKGHFGPINSLAFHPDGKSYASGGED---------GFLISNTLSNGLD--ISEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       567 ~~l~~h~~~V~~l~~spdg~~l~sgs~D---------g~I~vwdl~~~~~--~~~~~~v~~~~~spdg~~l  626 (894)
                      +.... ..  ....|+|||++|+..+..         ..|.+.|++.+..  +..........|+|||+.+
T Consensus       315 rlt~~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I  382 (419)
T PRK04043        315 QVVFH-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTANGVNQFPRFSSDGGSI  382 (419)
T ss_pred             eCccC-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCCCCcCCeEECCCCCEE
Confidence            43322 11  134899999998877653         2578888877652  2223333457788888765

>KOG2321|consensus

Probab=99.08  E-value=3.7e-09  Score=114.81  Aligned_cols=166  Identities=10%  Similarity=0.187  Sum_probs=135.7

Q ss_pred             EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------------------------
Q psy10063        424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---------------------------  476 (894)
Q Consensus       424 L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------------------------  476 (894)
                      |++++....|+-++++.|+.+.-|....+ .+++|.+.+...+|++|+.+|.+                           
T Consensus       148 ly~~gsg~evYRlNLEqGrfL~P~~~~~~-~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~  226 (703)
T KOG2321|consen  148 LYLVGSGSEVYRLNLEQGRFLNPFETDSG-ELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGD  226 (703)
T ss_pred             EEEeecCcceEEEEccccccccccccccc-cceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCcccc
Confidence            34444445788999999999999887776 99999999999999999988877                           


Q ss_pred             --cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        477 --EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       477 --~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                        ..|.+|.|+.+|-.|++|..+|.|.|||++..+++..-.|  .-+|..+.|.+.+..-.+.+.|..+           
T Consensus       227 ~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~-----------  295 (703)
T KOG2321|consen  227 AAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRI-----------  295 (703)
T ss_pred             ccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHH-----------
Confidence              2599999999999999999999999999999998887777  4678999997764333333444443           


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                        ++|||-..|+....+.. ...+..+++-|++.+|+++-+++.|..|=+..
T Consensus       296 --~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  296 --LKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             --hhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence              89999999998887753 44589999999999999999888887776543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.06  E-value=1.2e-07  Score=107.25  Aligned_cols=104  Identities=13%  Similarity=-0.001  Sum_probs=72.6

Q ss_pred             ceEEEEEecCCCE-EEEEECC---CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATM-FITASKD---HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~-L~sgs~D---g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .+...+|+|||+. ++..+.+   ..|.++|+.+++........+......|+|||++|+.......           ..
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g-----------~~  257 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKG-----------QP  257 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCC-----------Cc
Confidence            3567788888874 5544433   4688999999887777666677778899999998887654321           23


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      +|.++|+..++. ..+..+........|+|||+.|+..+.
T Consensus       258 ~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sd  296 (419)
T PRK04043        258 DIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSD  296 (419)
T ss_pred             EEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEEC
Confidence            478888877654 445444443446689999998877663

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.04  E-value=5.5e-07  Score=110.73  Aligned_cols=327  Identities=13%  Similarity=0.090  Sum_probs=179.7

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEE----EcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc-ce
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLF----TTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV-GK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iw----dl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~-~~  552 (894)
                      .|.++.|-++...|+.+..+|.|.++    +.....+...-..+..|.+++||||+..|++..+++.+.+...+-.. .+
T Consensus        77 ~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E  156 (928)
T PF04762_consen   77 KIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISE  156 (928)
T ss_pred             cEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEE
Confidence            78899999999999999999999999    55544443333447899999999999999999999876554322110 00


Q ss_pred             ee-----------EEE-Eec-------cccceE--------------EEccCCCCCeEEEEEecCCCEEEEEeC---C--
Q psy10063        553 FD-----------ARF-YHL-------IFEEEF--------------ARIKGHFGPINSLAFHPDGKSYASGGE---D--  594 (894)
Q Consensus       553 ~~-----------v~v-wd~-------~~~~~~--------------~~l~~h~~~V~~l~~spdg~~l~sgs~---D--  594 (894)
                      ..           |.| |--       ..|+..              ..+. +...-..|+|-.||.|||+.+.   .  
T Consensus       157 ~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~  235 (928)
T PF04762_consen  157 VPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGS  235 (928)
T ss_pred             eecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCc
Confidence            00           100 100       001110              0111 3335567899999999998764   3  


Q ss_pred             -CcEEEEECCCCccccC----CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHH
Q psy10063        595 -GFLISNTLSNGLDISE----GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIE  669 (894)
Q Consensus       595 -g~I~vwdl~~~~~~~~----~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~  669 (894)
                       ..||||+-+ |.....    ......++|.|.|.++++.....                      ....|.|+.     
T Consensus       236 ~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~----------------------~~~~VvFfE-----  287 (928)
T PF04762_consen  236 RRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLP----------------------DRHDVVFFE-----  287 (928)
T ss_pred             eeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcC----------------------CCcEEEEEe-----
Confidence             468999876 332221    22334678888888774433100                      111222222     


Q ss_pred             HhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccC
Q psy10063        670 MARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLD  749 (894)
Q Consensus       670 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~d  749 (894)
                               ..|.+..-+      .+.+.+   .......+.++.++.++++...+.        +++|-...- .|  .
T Consensus       288 ---------rNGLrhgeF------~l~~~~---~~~~v~~l~Wn~ds~iLAv~~~~~--------vqLWt~~NY-HW--Y  338 (928)
T PF04762_consen  288 ---------RNGLRHGEF------TLRFDP---EEEKVIELAWNSDSEILAVWLEDR--------VQLWTRSNY-HW--Y  338 (928)
T ss_pred             ---------cCCcEeeeE------ecCCCC---CCceeeEEEECCCCCEEEEEecCC--------ceEEEeeCC-EE--E
Confidence                     111111000      011111   111225688999999999965333        666632221 11  1


Q ss_pred             CCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCC-eEEEEecCCCCceeE
Q psy10063        750 GSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTT-REVTTTSTKVGKFDA  827 (894)
Q Consensus       750 g~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~-~l~~as~d~~g~~~I  827 (894)
                      .+.. +.-.....+..+.|+|. ...|.+...+|.+..++..-.-....        ..+++.. .+++..+.     .|
T Consensus       339 LKqe-i~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~--------~~~~~D~g~vaVIDG~-----~l  404 (928)
T PF04762_consen  339 LKQE-IRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSP--------GSSPNDNGTVAVIDGN-----KL  404 (928)
T ss_pred             EEEE-EEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecC--------CCCccCceEEEEEeCC-----eE
Confidence            1111 11112223344889986 45577777767776665321110000        0111111 22222222     36


Q ss_pred             EEeecCCcce-----eeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        828 RFYHLIFEEE-----FARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       828 ~vwd~~tg~~-----l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      +|-.++..-.     ...+. -...|.+++|++++..++....||.|.+|.+...
T Consensus       405 llTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~  458 (928)
T PF04762_consen  405 LLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLK  458 (928)
T ss_pred             EEecccccCCCchHhceEEc-CCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCC
Confidence            7766654421     12222 3467999999999988999999999999996543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.00  E-value=1.3e-07  Score=95.89  Aligned_cols=204  Identities=16%  Similarity=0.175  Sum_probs=125.8

Q ss_pred             eeeccCccEEEecCCCeEEEEE---------------ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063        384 NSMSPAARKLATNAEPVVKMQV---------------TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS  448 (894)
Q Consensus       384 ~~~s~dg~~l~~~~~~~~~~~l---------------~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~  448 (894)
                      .+.+.||++||...+..+.+.-               ++..-.-+.++||||+.+||.+...|+|+|||+.. ..+..+.
T Consensus         3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~   81 (282)
T PF15492_consen    3 LALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIP   81 (282)
T ss_pred             eeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcC
Confidence            4678899999988776555421               11223346789999999999999999999999884 5555555


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC------CCEEEEEECCCCEEEEEcC-----CCcEEEEEeC-
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD------ATMFITASKDHTAKLFTTH-----DRQLLKTYTT-  516 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd------g~~L~sgs~Dg~V~iwdl~-----~~~~~~~~~~-  516 (894)
                      .... .+.      |-.           ..|..|.|.+-      ...|++-..+|.++-|-+.     ..+..+.|.. 
T Consensus        82 p~~~-~~~------d~~-----------~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~  143 (282)
T PF15492_consen   82 PAMS-FPG------DLS-----------DAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFS  143 (282)
T ss_pred             cccc-cCC------ccc-----------cceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEec
Confidence            3221 000      000           13445555431      1246666678888777653     3344555542 


Q ss_pred             ---CCCeeEEEEcCCCCEEEEEECCCCe-----------EEEeccCccceee---------------EEEEeccccceEE
Q psy10063        517 ---ERPVNSAALSPILPHVVLGGGQEAR-----------EVTTTSTKVGKFD---------------ARFYHLIFEEEFA  567 (894)
Q Consensus       517 ---~~~v~~l~~spdg~~l~~~~~~~~~-----------~v~~~~~~~~~~~---------------v~vwd~~~~~~~~  567 (894)
                         ...|.++.|+|..++|++||.....           ..|.+-....-+.               ..+|.+...+...
T Consensus       144 ~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs  223 (282)
T PF15492_consen  144 SHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFS  223 (282)
T ss_pred             ccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeee
Confidence               4689999999999999988764332           2222111111000               0111111111111


Q ss_pred             EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        568 RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       568 ~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ........|..|.+||||..||+...+|.|.+|++..-+
T Consensus       224 ~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~  262 (282)
T PF15492_consen  224 RQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLR  262 (282)
T ss_pred             ccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcch
Confidence            112346689999999999999999999999999997654

>KOG1912|consensus

Probab=98.99  E-value=5.5e-08  Score=109.07  Aligned_cols=166  Identities=13%  Similarity=0.161  Sum_probs=121.2

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      |...-.++.|+|.| +||.|+.. .|.|-|..+.+.++.+..|+. .|..+.|.|...              ..-.++|.
T Consensus        14 ~~sN~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~s-~V~~VrWap~~~--------------p~~llS~~   76 (1062)
T KOG1912|consen   14 SRSNRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQS-AVTSVRWAPAPS--------------PRDLLSPS   76 (1062)
T ss_pred             CcccccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCcc-ceeEEEeccCCC--------------chhccCcc
Confidence            33446788999877 88888764 799999999999999999998 899999988532              11223332


Q ss_pred             --CCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcC---CCC-EEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        488 --ATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSP---ILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       488 --g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~sp---dg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                        .-+||++...|.|.|||...+..+..+.++ +.+..++|-+   +.+ .|++-.+...              +.+|+.
T Consensus        77 ~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~--------------lvLwnt  142 (1062)
T KOG1912|consen   77 SSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSST--------------LVLWNT  142 (1062)
T ss_pred             ccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcE--------------EEEEEc
Confidence              235677777899999999999888888874 6788888765   343 3444444443              778888


Q ss_pred             cccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      .+|+.+-+.........|+.+.| |.+.|+..+..|.|.+-+.-.
T Consensus       143 dtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~  187 (1062)
T KOG1912|consen  143 DTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLG  187 (1062)
T ss_pred             cCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccC
Confidence            88887776655555677888988 667777777788877776543

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.96  E-value=1.7e-07  Score=105.81  Aligned_cols=109  Identities=10%  Similarity=-0.026  Sum_probs=77.4

Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCC-CCCeeE
Q psy10063        772 REKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-FGPINS  850 (894)
Q Consensus       772 g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH-~~~V~~  850 (894)
                      +.+|++++.+|.++.||..+++.+....... ......++.+++++..++    .|+.+|..+|+.+...... ...+.+
T Consensus       241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~~~~~~vyv~~~~G----~l~~~d~~tG~~~W~~~~~~~~~~ss  315 (377)
T TIGR03300       241 GGQVYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPAVDDNRLYVTDADG----VVVALDRRSGSELWKNDELKYRQLTA  315 (377)
T ss_pred             CCEEEEEEcCCEEEEEECCCCcEEEeeccCC-ccCceEeCCEEEEECCCC----eEEEEECCCCcEEEccccccCCcccc
Confidence            4577778889999999999888766554322 122334677777777665    5999999999887555321 122222


Q ss_pred             EEEeeCCcEEEEecCCCcEEEEecCccccccccccCc
Q psy10063        851 LAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISE  887 (894)
Q Consensus       851 l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~  887 (894)
                      ..+  .+.+|+.++.||.|++|+.++++++.++++..
T Consensus       316 p~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~  350 (377)
T TIGR03300       316 PAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG  350 (377)
T ss_pred             CEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence            223  36688899999999999999999998887655

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1409|consensus

Probab=98.94  E-value=3.4e-08  Score=101.49  Aligned_cols=244  Identities=14%  Similarity=0.109  Sum_probs=157.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEc-CCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTT-HDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl-~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.....-|...-+++.+.|.++|||-- ..++....+.|  ..++.++.+.++.++|+++-..+.+.-+....      
T Consensus        26 ~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~se------   99 (404)
T KOG1409|consen   26 DVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSE------   99 (404)
T ss_pred             hhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhh------
Confidence            5666666676677999999999999954 45777777766  57899999999999999999888754433222      


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                          |......++....|...|..+.|+....++++.+.|..+..--.+.+..+.                     +...
T Consensus       100 ----dfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg---------------------~Y~~  154 (404)
T KOG1409|consen  100 ----DFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLG---------------------GYNF  154 (404)
T ss_pred             ----hhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCccc---------------------ceEe
Confidence                222233444556899999999999888999999999877544333332221                     0000


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                      .-.....     ...+.                                           ..+..+             +
T Consensus       155 ~~~~t~~-----~~d~~-------------------------------------------~~fvGd-------------~  173 (404)
T KOG1409|consen  155 ETPASAL-----QFDAL-------------------------------------------YAFVGD-------------H  173 (404)
T ss_pred             eccCCCC-----ceeeE-------------------------------------------EEEecc-------------c
Confidence            0000000     00000                                           000000             0


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                      .|.+...              ++        +...-..+..+.+|.+.+.+++|.+..++|.+|..|..+.+||+.-.+ 
T Consensus       174 ~gqvt~l--------------r~--------~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~-  230 (404)
T KOG1409|consen  174 SGQITML--------------KL--------EQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK-  230 (404)
T ss_pred             ccceEEE--------------EE--------eecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCc-
Confidence            0000000              00        000011122467899999999999999999999999988888753211 


Q ss_pred             eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        795 TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       795 ~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                                                               .....+.+|.+.|..+...+--+.|+++++||.|.+|++
T Consensus       231 -----------------------------------------g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~m  269 (404)
T KOG1409|consen  231 -----------------------------------------GTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNM  269 (404)
T ss_pred             -----------------------------------------ceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEec
Confidence                                                     122457789999999999888899999999999999998


Q ss_pred             Ccc
Q psy10063        875 DQA  877 (894)
Q Consensus       875 ~~~  877 (894)
                      +-.
T Consensus       270 n~~  272 (404)
T KOG1409|consen  270 NVK  272 (404)
T ss_pred             cce
Confidence            643

>KOG0280|consensus

Probab=98.93  E-value=2e-07  Score=94.14  Aligned_cols=103  Identities=14%  Similarity=0.073  Sum_probs=70.7

Q ss_pred             CCC-EEEEEECCCCEEEEEcCCCcEEEEEeC------C-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        487 DAT-MFITASKDHTAKLFTTHDRQLLKTYTT------E-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       487 dg~-~L~sgs~Dg~V~iwdl~~~~~~~~~~~------~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      +|. .|+-+-.+|.|.++..........+..      . ....++.|++.+..++++-.+|.+.+              .
T Consensus        83 ~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~--------------v  148 (339)
T KOG0280|consen   83 DGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISG--------------V  148 (339)
T ss_pred             CccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEE--------------E
Confidence            344 455566778888887654443333332      1 12467889999999999988887542              1


Q ss_pred             ecccc--ceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECC
Q psy10063        559 HLIFE--EEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       559 d~~~~--~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~  603 (894)
                      +....  +.++.++.|+-+.+-+.|+.. -..+++|+.|+.+..||++
T Consensus       149 ~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R  196 (339)
T KOG0280|consen  149 YETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR  196 (339)
T ss_pred             ecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence            21112  223467889999999999863 4688999999999999986

>KOG0280|consensus

Probab=98.87  E-value=3e-08  Score=99.94  Aligned_cols=165  Identities=15%  Similarity=0.084  Sum_probs=114.3

Q ss_pred             EEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecC-CCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        404 QVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLR-MGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~-tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .+++|..+++-+.|+.. -.++++|++|+.+.-||++ .++.+.. .+.|..                         .|.
T Consensus       160 ~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~-------------------------GV~  214 (339)
T KOG0280|consen  160 TWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTS-------------------------GVV  214 (339)
T ss_pred             cccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeec-------------------------ceE
Confidence            67889999999999864 4589999999999999998 3444433 344554                         566


Q ss_pred             EEEEec-CCCEEEEEECCCCEEEEEcC-CCcEEEEEeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        481 DMQFSK-DATMFITASKDHTAKLFTTH-DRQLLKTYTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~-~~~~~~~~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +|.-+| ++.+|++|++|..|++||.+ -++++..-...+.|+.+.++|.-. +|+.++.-...+|...+.+..++++  
T Consensus       215 SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~--  292 (339)
T KOG0280|consen  215 SIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQI--  292 (339)
T ss_pred             EEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchhe--
Confidence            776665 68899999999999999999 477777766779999999999643 3333344444344333333222222  


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEE-EEEC
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLI-SNTL  602 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~-vwdl  602 (894)
                             .+...+.|.+-++.-.|.....+|++|+ .|+.|+ +|-.
T Consensus       293 -------~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~  332 (339)
T KOG0280|consen  293 -------VLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLH  332 (339)
T ss_pred             -------eeeccccccceeeccccccccceeeeeeccccceeeeeee
Confidence                   2334567887777778855556788876 466644 6644

>KOG0309|consensus

Probab=98.87  E-value=1.2e-08  Score=113.61  Aligned_cols=182  Identities=16%  Similarity=0.194  Sum_probs=121.5

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCC-e---EEEE----------ecCCCCCCeeEEEEcCCCCEEE--EEeC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMG-R---ELES----------ISGHAKEPINDMQFSKDATMFI--TASH  472 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg-~---~~~~----------l~~h~~~~V~~v~~spdg~~la--~~~~  472 (894)
                      .+.+.++.++|.|+-+|.++.-| +.|-|+... .   .++.          +..|.....+.|.++++..++-  ..+.
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss  102 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS  102 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence            46678888999999888888765 555566432 1   1221          1223333444444444332211  1111


Q ss_pred             CC--------CccceEEEEEecC-CCEEEEEECCCCEEEEEcCCCc-EEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        473 SQ--------AVEPINDMQFSKD-ATMFITASKDHTAKLFTTHDRQ-LLKTYTT-ERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       473 d~--------~i~~V~~l~~spd-g~~L~sgs~Dg~V~iwdl~~~~-~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      +.        +-+.|..+-|.+. ...|++|+.|-.|..||+++.. .+..+.. +.....++|+-....+++.+.... 
T Consensus       103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~-  181 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGND-  181 (1081)
T ss_pred             ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCc-
Confidence            11        1158889999884 5588999999999999999754 4444443 566778899876666655554443 


Q ss_pred             EEEeccCccceeeEEEEeccccc-eEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~  605 (894)
                                   |++||++.|. ++..+++|...|..++|..- ...+.+++.||.|++|+.+..
T Consensus       182 -------------i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS  234 (1081)
T KOG0309|consen  182 -------------IFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS  234 (1081)
T ss_pred             -------------eEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence                         8999988764 66778999999999988652 335888999999999998754

>KOG1064|consensus

Probab=98.85  E-value=3e-08  Score=120.02  Aligned_cols=223  Identities=14%  Similarity=0.126  Sum_probs=156.3

Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      ..+..|.+|.-+|...+.++|+.||.|++|....++.+..++.  ...|..+.|+.+|..+.++.+||.           
T Consensus      2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~----------- 2274 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGD----------- 2274 (2439)
T ss_pred             cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCc-----------
Confidence            3345788888888888999999999999999999998888774  578999999999999999999997           


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe---CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEe
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG---EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs---~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~  628 (894)
                         +.+|... .+.....+.|......+.|-.  ..+++++   .++.+.+||.-...                      
T Consensus      2275 ---l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~---------------------- 2326 (2439)
T KOG1064|consen 2275 ---LSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPP---------------------- 2326 (2439)
T ss_pred             ---eeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCc----------------------
Confidence               6666655 444555567877777777764  4455543   34567777642100                      


Q ss_pred             cCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEee
Q psy10063        629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARN  708 (894)
Q Consensus       629 ~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~  708 (894)
                                                                                                      
T Consensus      2327 -------------------------------------------------------------------------------- 2326 (2439)
T KOG1064|consen 2327 -------------------------------------------------------------------------------- 2326 (2439)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063        709 RMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       709 ~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd  788 (894)
                                                                ....+...|.+.+.++++.|..+.|++|+.+|.|+|||
T Consensus      2327 ------------------------------------------~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D 2364 (2439)
T KOG1064|consen 2327 ------------------------------------------MNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFD 2364 (2439)
T ss_pred             ------------------------------------------ccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEee
Confidence                                                      00011234777889999999999999999999999999


Q ss_pred             ccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-C--CC---CeeEEEEeeCCcEEEE
Q psy10063        789 DRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-H--FG---PINSLAFHPDGKSYAS  862 (894)
Q Consensus       789 ~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-H--~~---~V~~l~fSpdg~~LaS  862 (894)
                      ++..++.+.+..      +. -..+++.++..+    .|+||++..-.++..+.. |  .+   .|-.-.+--...+|++
T Consensus      2365 ~rqrql~h~~~~------~~-~~~~f~~~ss~g----~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nrifs 2433 (2439)
T KOG1064|consen 2365 IRQRQLRHTFQA------LD-TREYFVTGSSEG----NIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRIFS 2433 (2439)
T ss_pred             hHHHHHHHHhhh------hh-hhheeeccCccc----ceEEEEccccchhhcCchhhcccchhhhcCceeeeccCceEEE
Confidence            998777665544      22 334556665555    599999988777766542 2  11   1111111223456888


Q ss_pred             ecCCCc
Q psy10063        863 GGEDGF  868 (894)
Q Consensus       863 ~s~Dg~  868 (894)
                      ||.||+
T Consensus      2434 Cgad~~ 2439 (2439)
T KOG1064|consen 2434 CGADGT 2439 (2439)
T ss_pred             ecCCCC
Confidence            888873

>KOG3914|consensus

Probab=98.83  E-value=1e-07  Score=100.30  Aligned_cols=113  Identities=12%  Similarity=0.099  Sum_probs=82.5

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCC----CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHD----RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~----~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .+..+.+++++++||.+..++...++++..    .+++..+.......++.|..+...+.++...|..           +
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~-----------~  132 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDV-----------Y  132 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCc-----------e
Confidence            345566778888888888888877777653    2345555556667777787777777766655532           2


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      .+.+|....+.+. .+.||-.-+..|+|+||+++|+++..|..|||-.+
T Consensus       133 ~~di~s~~~~~~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~y  180 (390)
T KOG3914|consen  133 SFDILSADSGRCE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRY  180 (390)
T ss_pred             eeeeecccccCcc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEec
Confidence            3667776654444 44599999999999999999999999999998655

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.78  E-value=5.9e-06  Score=86.70  Aligned_cols=156  Identities=14%  Similarity=0.125  Sum_probs=98.5

Q ss_pred             CCEEEEEEcc-CCCEEEEecCCCc-EEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        410 AKITSLLWGN-LDQYIITGHAKGD-ICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       410 ~~V~~l~~sp-dg~~L~sgs~Dg~-I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .+...++.+| ++..++++-.-|. +.+||..+|+.++.+....+            +.|           .--..|++|
T Consensus         5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~g------------RHF-----------yGHg~fs~d   61 (305)
T PF07433_consen    5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPG------------RHF-----------YGHGVFSPD   61 (305)
T ss_pred             ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCC------------CEE-----------ecCEEEcCC
Confidence            3456788889 5667777776664 78999999998877764332            111           123456777


Q ss_pred             CCEEEEEE-----CCCCEEEEEcC-CCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEE------eccCccceee
Q psy10063        488 ATMFITAS-----KDHTAKLFTTH-DRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVT------TTSTKVGKFD  554 (894)
Q Consensus       488 g~~L~sgs-----~Dg~V~iwdl~-~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~------~~~~~~~~~~  554 (894)
                      |++|++.-     ..|.|-|||.. ..+.+.+|.. .-....|.|.|||+.|+++-+.  |.-.      ++.....+-.
T Consensus        62 G~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGG--I~Thpd~GR~kLNl~tM~ps  139 (305)
T PF07433_consen   62 GRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGG--IETHPDSGRAKLNLDTMQPS  139 (305)
T ss_pred             CCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCC--CccCcccCceecChhhcCCc
Confidence            77777653     35889999999 6677777774 4567788899999888887532  1110      0111111112


Q ss_pred             EEEEeccccceEEE--c--cCCCCCeEEEEEecCCCEEEE
Q psy10063        555 ARFYHLIFEEEFAR--I--KGHFGPINSLAFHPDGKSYAS  590 (894)
Q Consensus       555 v~vwd~~~~~~~~~--l--~~h~~~V~~l~~spdg~~l~s  590 (894)
                      +.+.|..+|+.+.+  |  ..|+-.|..|++..+|..++.
T Consensus       140 L~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a  179 (305)
T PF07433_consen  140 LVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFA  179 (305)
T ss_pred             eEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEE
Confidence            55566677776665  3  235667777777777654443

>KOG3914|consensus

Probab=98.77  E-value=4.5e-08  Score=102.93  Aligned_cols=157  Identities=12%  Similarity=0.100  Sum_probs=106.7

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeE----EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRE----LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~----~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      .+..+.+++++++||++..+..+.++++.....    +..+....                          .-..+.|..
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~--------------------------~~~ai~~~~  117 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPK--------------------------RPTAISFIR  117 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeeccc--------------------------Ccceeeeee
Confidence            345556778888888887777777777654332    11111111                          223334444


Q ss_pred             CCCEEEEE---ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        487 DATMFITA---SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       487 dg~~L~sg---s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +...+..+   +....+.+|....+.+.-.+.|-..+..++|+||+++|+++..|+.|+|              -.+..-
T Consensus       118 ~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRv--------------s~ypa~  183 (390)
T KOG3914|consen  118 EDTSVLVADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRV--------------SRYPAT  183 (390)
T ss_pred             ccceEEEEeecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEE--------------EecCcc
Confidence            33333333   3445566666666888888888899999999999999999999998544              322222


Q ss_pred             ceEEE-ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        564 EEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       564 ~~~~~-l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      -.+.. +.||...|..++.-+ ++.|+++|.|++|++||+..++.+
T Consensus       184 f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~~sgk~L  228 (390)
T KOG3914|consen  184 FVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDITSGKLL  228 (390)
T ss_pred             cchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEecccCCcc
Confidence            22222 358999999999865 466999999999999999998765

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.77  E-value=3.3e-06  Score=95.73  Aligned_cols=156  Identities=12%  Similarity=0.053  Sum_probs=92.7

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCC-CCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKD-ATMFITASHSQAVEPINDMQFSKDATMFITASKDH  498 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spd-g~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg  498 (894)
                      .+..|+.++.+|.|.-+|.++|+.+-+........+    ++.. +..+           ...+..  ++..|+.++.+|
T Consensus        68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~----~~~~~~~~~-----------~~~~~v--~~~~v~v~~~~g  130 (394)
T PRK11138         68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGW----FSKNKSALL-----------SGGVTV--AGGKVYIGSEKG  130 (394)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccc----ccccccccc-----------ccccEE--ECCEEEEEcCCC
Confidence            366888888889999999999998776654321000    0000 0000           001111  355677788899


Q ss_pred             CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC---
Q psy10063        499 TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP---  575 (894)
Q Consensus       499 ~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~---  575 (894)
                      .|+.+|.++|+++........+.+--.- .+..++++..++.              |..+|.++|+.+-.+......   
T Consensus       131 ~l~ald~~tG~~~W~~~~~~~~~ssP~v-~~~~v~v~~~~g~--------------l~ald~~tG~~~W~~~~~~~~~~~  195 (394)
T PRK11138        131 QVYALNAEDGEVAWQTKVAGEALSRPVV-SDGLVLVHTSNGM--------------LQALNESDGAVKWTVNLDVPSLTL  195 (394)
T ss_pred             EEEEEECCCCCCcccccCCCceecCCEE-ECCEEEEECCCCE--------------EEEEEccCCCEeeeecCCCCcccc
Confidence            9999999999998877765443321111 1345666666664              566677777666554322110   


Q ss_pred             --eEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc
Q psy10063        576 --INSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       576 --V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                        ..+...  .+..++.+..+|.+..+|.+.++.++
T Consensus       196 ~~~~sP~v--~~~~v~~~~~~g~v~a~d~~~G~~~W  229 (394)
T PRK11138        196 RGESAPAT--AFGGAIVGGDNGRVSAVLMEQGQLIW  229 (394)
T ss_pred             cCCCCCEE--ECCEEEEEcCCCEEEEEEccCChhhh
Confidence              011111  12356677788999999988877554

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.77  E-value=3.8e-06  Score=88.12  Aligned_cols=206  Identities=14%  Similarity=0.108  Sum_probs=138.9

Q ss_pred             EEEEccCCCEEEEecC-----CCcEEEEecC-CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        414 SLLWGNLDQYIITGHA-----KGDICTWDLR-MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~-----Dg~I~iWd~~-tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ..+||+||++|++.-.     .|.|-|||.. ..+.+.+|..|.- ....|.+.|||+.|+++-.        .|.-+||
T Consensus        55 Hg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GI-GPHel~l~pDG~tLvVANG--------GI~Thpd  125 (305)
T PF07433_consen   55 HGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGI-GPHELLLMPDGETLVVANG--------GIETHPD  125 (305)
T ss_pred             CEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCc-ChhhEEEcCCCCEEEEEcC--------CCccCcc
Confidence            4589999999998643     4889999998 6678888988776 7788999999988877643        2344454


Q ss_pred             C--CEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        488 A--TMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       488 g--~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      .  ..|=...++-.|.+.|.++|+++.....     +-.+..|++..+|..++..-..+..       ....--|.+++.
T Consensus       126 ~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~-------~~~~PLva~~~~  198 (305)
T PF07433_consen  126 SGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDP-------GDAPPLVALHRR  198 (305)
T ss_pred             cCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCC-------CccCCeEEEEcC
Confidence            3  3455566788888899999999887543     3579999999998877665544421       000001333332


Q ss_pred             cccceEEEc-------cCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccccC--CCceeeeEECcCCcEEEecC
Q psy10063        561 IFEEEFARI-------KGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDISE--GSFTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       561 ~~~~~~~~l-------~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~~--~~~v~~~~~spdg~~l~~~~  630 (894)
                        ++.+..+       ..-.+.|-+|+++.+|.+|+..+ ..+.+.+||..+++.+..  ...++.++...++.++.+..
T Consensus       199 --g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D~cGva~~~~~f~~ssG~  276 (305)
T PF07433_consen  199 --GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPDACGVAPTDDGFLVSSGQ  276 (305)
T ss_pred             --CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCceeeeeecCCceEEeCCC
Confidence              2323222       23456789999999998775544 678899999999886643  33445555556664444455


Q ss_pred             CeEEEEe
Q psy10063        631 GHIHSLS  637 (894)
Q Consensus       631 g~i~~~~  637 (894)
                      |.+..+.
T Consensus       277 G~~~~~~  283 (305)
T PF07433_consen  277 GQLIRLS  283 (305)
T ss_pred             ccEEEcc
Confidence            5544443

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.76  E-value=4.5e-06  Score=84.90  Aligned_cols=111  Identities=12%  Similarity=0.046  Sum_probs=68.4

Q ss_pred             CCCceEEEeeCCCCCEEEEecCCC-----------cEEEEEccCCceeeccccCCCceEeecCCCeEEE-EecCCCCc--
Q psy10063        759 PVDIGFKMPEPPKREKLALALADK-----------VSERYRDRKNKATAGFLLSCPDFLFDFDTTREVT-TTSTKVGK--  824 (894)
Q Consensus       759 h~~~v~~la~spdg~~Latgs~Dg-----------~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~-as~d~~g~--  824 (894)
                      +...|.++.++|..++|++|+...           -|..|++-.+..                 .+..+ ...++...  
T Consensus       146 yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~P-----------------yyk~v~~~~~~~~~~~  208 (282)
T PF15492_consen  146 YPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSP-----------------YYKQVTSSEDDITASS  208 (282)
T ss_pred             CCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCC-----------------cEEEccccCccccccc
Confidence            456788999999988888776432           134444332221                 11111 11111100  


Q ss_pred             eeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063        825 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       825 ~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      -...+|.+-..+.........+.|..|..||||..||+...+|.|.||++..-.++.+...+
T Consensus       209 ~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~  270 (282)
T PF15492_consen  209 KRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD  270 (282)
T ss_pred             cccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence            01233443333333323345678999999999999999999999999999988887777653

>KOG0882|consensus

Probab=98.75  E-value=1e-07  Score=101.13  Aligned_cols=293  Identities=13%  Similarity=0.130  Sum_probs=183.4

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCC--C-eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRM--G-RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t--g-~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      |.+.|..+.-. ..+++++++.||.++.|.-..  | +.++.+..|..                         .|.+++.
T Consensus         8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~-------------------------~I~sl~~   61 (558)
T KOG0882|consen    8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLG-------------------------VILSLAV   61 (558)
T ss_pred             ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHH-------------------------HHHhhhc
Confidence            77778777554 456999999999999998543  1 23444555655                         6777888


Q ss_pred             ecCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcC-CC---CEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        485 SKDATMFITASK-DHTAKLFTTHDRQLLKTYTTERPVNSAALSP-IL---PHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       485 spdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~sp-dg---~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +-+|.++++++. |+.++++|+++-..+..++.......+.|.- .|   ..|++...+...             +.++|
T Consensus        62 S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~-------------i~VvD  128 (558)
T KOG0882|consen   62 SYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGK-------------IFVVD  128 (558)
T ss_pred             cccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCC-------------cEEEC
Confidence            888999999777 9999999999877665555433222333322 12   134444433321             66666


Q ss_pred             ccccc--eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        560 LIFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       560 ~~~~~--~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      -...-  ....-+-|..+|.++.+.+-+..+++....|.|..|..+...+..            ++.             
T Consensus       129 ~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfP------------r~~-------------  183 (558)
T KOG0882|consen  129 GFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFP------------RTN-------------  183 (558)
T ss_pred             CcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCc------------ccc-------------
Confidence            55433  222334599999999999999999999999999999876411100            000             


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                            +. |.                                               +..+  
T Consensus       184 ----------------------l~-~~-----------------------------------------------~K~e--  191 (558)
T KOG0882|consen  184 ----------------------LN-FE-----------------------------------------------LKHE--  191 (558)
T ss_pred             ----------------------cc-cc-----------------------------------------------cccc--
Confidence                                  00 00                                               0000  


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                                       ..+..+........++.|+|++..++.-..|..|++++.+.++.++.
T Consensus       192 ---------------------------------TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqe  238 (558)
T KOG0882|consen  192 ---------------------------------TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQE  238 (558)
T ss_pred             ---------------------------------chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhh
Confidence                                             00001111233456889999999999999999999999999988766


Q ss_pred             cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCccee---eeccCCCC-CeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        798 FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF---ARIKGHFG-PINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       798 ~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l---~~l~gH~~-~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      +........+-+...              ++|-++.-|+.+   +.+.-|.. .-..+.|...|.+|+-+.-=| |+|.+
T Consensus       239 iDE~~t~~~~q~ks~--------------y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin  303 (558)
T KOG0882|consen  239 IDEVLTDAQYQPKSP--------------YGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVIN  303 (558)
T ss_pred             hhccchhhhhccccc--------------cccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEE
Confidence            544332222222221              223333323222   22333433 234678999999999988776 89999


Q ss_pred             cCccccccccc
Q psy10063        874 FDQAYFDYTFD  884 (894)
Q Consensus       874 l~~~~~~~~~~  884 (894)
                      ++...+...+.
T Consensus       304 ~~tn~v~ri~g  314 (558)
T KOG0882|consen  304 LDTNTVVRILG  314 (558)
T ss_pred             eecCeEEEEec
Confidence            98887766653

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.70  E-value=4.4e-06  Score=95.25  Aligned_cols=112  Identities=4%  Similarity=-0.066  Sum_probs=81.4

Q ss_pred             cCCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEEc--CCCCEEEEEeCCCCccceEEEEEecCCCEEEEE-
Q psy10063        419 NLDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQFS--KDATMFITASHSQAVEPINDMQFSKDATMFITA-  494 (894)
Q Consensus       419 pdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~s--pdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg-  494 (894)
                      .||+||+.-.. ...|..-+++.-++.+.+.--....+..++|-  |.-.|++.+++.       .+=+++||+.|... 
T Consensus       139 ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~-------~~PlpnDGk~l~~~~  211 (635)
T PRK02888        139 YDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEF-------RIPLPNDGKDLDDPK  211 (635)
T ss_pred             cceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCccc-------ccccCCCCCEeeccc
Confidence            37889998764 45677777777777665553322256666665  777887777653       34567788866443 


Q ss_pred             ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        495 SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       495 s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                      -..+.|.+.|.++.+....+...+....++++++|+++++.+.
T Consensus       212 ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsy  254 (635)
T PRK02888        212 KYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCY  254 (635)
T ss_pred             ceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEecc
Confidence            3457788999999888888887778888999999999998874

>KOG1064|consensus

Probab=98.70  E-value=5.8e-08  Score=117.67  Aligned_cols=178  Identities=13%  Similarity=0.240  Sum_probs=139.3

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------  476 (894)
                      .++.|-..|.++.=+|...+.++|+.||.|++|....++.+..++......|..+.|+.+|..+..+..||.+       
T Consensus      2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred             EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCC
Confidence            4556778899999999989999999999999999999998888874433489999999999999999888877       


Q ss_pred             ----------cceEEEEEecCCCEEEEE---ECCCCEEEEEcCC--Cc-EEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        477 ----------EPINDMQFSKDATMFITA---SKDHTAKLFTTHD--RQ-LLKTYTTERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       477 ----------~~V~~l~~spdg~~L~sg---s~Dg~V~iwdl~~--~~-~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                                +...++.|-.  ..++++   +.++.|.+||---  +. ++. .-|.+.+.++++-|..+.|++||.+|.
T Consensus      2283 k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~ 2359 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGE 2359 (2439)
T ss_pred             cceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCc
Confidence                      2233333432  344544   3568899999642  22 333 447789999999999999999999996


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                                    |++||++..+.++.++.         ++ ...+|++|+..|.|+||++.....+
T Consensus      2360 --------------v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2360 --------------VCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred             --------------EEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchh
Confidence                          89999997777665543         44 5678999999999999999876544

>KOG1354|consensus

Probab=98.68  E-value=3.4e-07  Score=94.11  Aligned_cols=181  Identities=15%  Similarity=0.220  Sum_probs=125.1

Q ss_pred             CCEEEEEEccCCC--EEEEecCCCcEEEEecCCCeE-----------------------------------EEEec-CCC
Q psy10063        410 AKITSLLWGNLDQ--YIITGHAKGDICTWDLRMGRE-----------------------------------LESIS-GHA  451 (894)
Q Consensus       410 ~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~tg~~-----------------------------------~~~l~-~h~  451 (894)
                      ..|..+.|.+++.  .++....|.+|++|.+.....                                   .+.+. .|.
T Consensus        85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt  164 (433)
T KOG1354|consen   85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT  164 (433)
T ss_pred             hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence            4678889998775  444455789999998743211                                   11111 344


Q ss_pred             CCCeeEEEEcCCCCEEEEEeCCC-----------Cc--------------cceEEEEEec-CCCEEEEEECCCCEEEEEc
Q psy10063        452 KEPINDMQFSKDATMFITASHSQ-----------AV--------------EPINDMQFSK-DATMFITASKDHTAKLFTT  505 (894)
Q Consensus       452 ~~~V~~v~~spdg~~la~~~~d~-----------~i--------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl  505 (894)
                      . -|.+|.+..|+..++++.+-.           ..              ..|.+..|+| ...+|+..+..|.|+|-|+
T Consensus       165 y-hiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDm  243 (433)
T KOG1354|consen  165 Y-HINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDM  243 (433)
T ss_pred             e-EeeeeeecCccceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeec
Confidence            4 677888888888888775421           11              4678888999 4667888889999999999


Q ss_pred             CCCcEE----EEEeC-------------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec-cccceEE
Q psy10063        506 HDRQLL----KTYTT-------------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL-IFEEEFA  567 (894)
Q Consensus       506 ~~~~~~----~~~~~-------------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~-~~~~~~~  567 (894)
                      +...+.    +.|..             -..|..+.|+..|++|++-..--               |++||+ ...+.+.
T Consensus       244 R~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDylt---------------vk~wD~nme~~pv~  308 (433)
T KOG1354|consen  244 RQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLT---------------VKLWDLNMEAKPVE  308 (433)
T ss_pred             hhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccce---------------eEEEeccccCCcce
Confidence            854321    11111             13578899999999999865433               899998 4555555


Q ss_pred             EccCCCC---------------CeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        568 RIKGHFG---------------PINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       568 ~l~~h~~---------------~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .+.-|..               .-..++|+.++.++++|+....+++|++..+.
T Consensus       309 t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  309 TYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             EEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence            5544431               12357899999999999999999999976653

>KOG1897|consensus

Probab=98.67  E-value=0.00024  Score=83.23  Aligned_cols=125  Identities=12%  Similarity=0.124  Sum_probs=80.8

Q ss_pred             cCCCCcceecCCC----CceEE---EeeCCC-CCEEEEec----------CCCcEEEEEccCCceee---ccccCCCceE
Q psy10063        748 LDGSDTPILAGPV----DIGFK---MPEPPK-REKLALAL----------ADKVSERYRDRKNKATA---GFLLSCPDFL  806 (894)
Q Consensus       748 ~dg~~~~~~~~h~----~~v~~---la~spd-g~~Latgs----------~Dg~I~iwd~~~~~~~~---~~~~~~~~~~  806 (894)
                      +|.....++..|+    ..+.+   ..|.-| +.++++|.          ..|.|.||...+.+.+.   .........+
T Consensus       755 lD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~a  834 (1096)
T KOG1897|consen  755 LDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYA  834 (1096)
T ss_pred             ecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceee
Confidence            4444455555553    22333   336666 77888774          24678888876633322   2222222222


Q ss_pred             e-ecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        807 F-DFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       807 f-S~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      + -..|+.+|... .     .|+||++..++.++.-..|..++..|.+.-.|..++.|..=+.|.+-.++..+
T Consensus       835 L~~fngkllA~In-~-----~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~e  901 (1096)
T KOG1897|consen  835 LVEFNGKLLAGIN-Q-----SVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDE  901 (1096)
T ss_pred             hhhhCCeEEEecC-c-----EEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccC
Confidence            2 23555555433 3     49999999998888888899999999999999999999988888776665444

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.63  E-value=1e-05  Score=101.66  Aligned_cols=181  Identities=9%  Similarity=0.076  Sum_probs=117.8

Q ss_pred             CEEEEEEccCCCEEEEec-CCCcEEEEecCCCeEEEEecCC--C--------------CCCeeEEEEcCCCCEE-EEEeC
Q psy10063        411 KITSLLWGNLDQYIITGH-AKGDICTWDLRMGRELESISGH--A--------------KEPINDMQFSKDATMF-ITASH  472 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs-~Dg~I~iWd~~tg~~~~~l~~h--~--------------~~~V~~v~~spdg~~l-a~~~~  472 (894)
                      .-..|+|.+++..|+++. ..+.|+++|+.++. +..|.+.  .              -.....|+|++++..| ++...
T Consensus       625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~  703 (1057)
T PLN02919        625 RPQGLAYNAKKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG  703 (1057)
T ss_pred             CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC
Confidence            468899999888776654 34679999988765 3333211  0              0134679999954443 33222


Q ss_pred             CCCc--------------------------------cceEEEEEecCCCEE-EEEECCCCEEEEEcCCCcEEEEEeC---
Q psy10063        473 SQAV--------------------------------EPINDMQFSKDATMF-ITASKDHTAKLFTTHDRQLLKTYTT---  516 (894)
Q Consensus       473 d~~i--------------------------------~~V~~l~~spdg~~L-~sgs~Dg~V~iwdl~~~~~~~~~~~---  516 (894)
                      ++.+                                .....|+|+|+|++| ++-+.++.|++||+.++........   
T Consensus       704 ~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~  783 (1057)
T PLN02919        704 QHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPT  783 (1057)
T ss_pred             CCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccc
Confidence            2111                                233468999999855 4556678999999987653221100   


Q ss_pred             -------------------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc--------
Q psy10063        517 -------------------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI--------  569 (894)
Q Consensus       517 -------------------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--------  569 (894)
                                         -....+++|+++|..+++-..++.              |++||...+......        
T Consensus       784 ~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~r--------------IrviD~~tg~v~tiaG~G~~G~~  849 (1057)
T PLN02919        784 FSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHK--------------IKKLDPATKRVTTLAGTGKAGFK  849 (1057)
T ss_pred             cCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCE--------------EEEEECCCCeEEEEeccCCcCCC
Confidence                               012468899999986655555554              777777665543221        


Q ss_pred             -----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        570 -----KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       570 -----~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                           .++......|+++++|+++++-..++.|++||+++++
T Consensus       850 dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~  891 (1057)
T PLN02919        850 DGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE  891 (1057)
T ss_pred             CCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence                 1122357889999999988888889999999998764

>KOG4649|consensus

Probab=98.63  E-value=4.4e-05  Score=76.22  Aligned_cols=136  Identities=10%  Similarity=-0.007  Sum_probs=90.5

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEE
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAK  501 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~  501 (894)
                      .+++.|+..+.+.--|..+|+.+.+-....                          +|.+-+.- -|.+++.|+..|.++
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~ilg~--------------------------RiE~sa~v-vgdfVV~GCy~g~lY   76 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAILGV--------------------------RIECSAIV-VGDFVVLGCYSGGLY   76 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehhhCc--------------------------eeeeeeEE-ECCEEEEEEccCcEE
Confidence            377778888888888888887655432211                          12222111 367799999999999


Q ss_pred             EEEcCCCcEEEEEeCCCCee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063        502 LFTTHDRQLLKTYTTERPVN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  580 (894)
Q Consensus       502 iwdl~~~~~~~~~~~~~~v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~  580 (894)
                      +.+.++|.....|...+.|. .....+++..|+.++.|+.              +...|.++..++.+.+--.+-..+-+
T Consensus        77 fl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~--------------~yalD~~~~~cVykskcgG~~f~sP~  142 (354)
T KOG4649|consen   77 FLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGN--------------FYALDPKTYGCVYKSKCGGGTFVSPV  142 (354)
T ss_pred             EEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCc--------------EEEecccccceEEecccCCceeccce
Confidence            99999998888777655553 3456788999999999997              66777777777777654444444555


Q ss_pred             EecCCCEEEEEeCCCcEE
Q psy10063        581 FHPDGKSYASGGEDGFLI  598 (894)
Q Consensus       581 ~spdg~~l~sgs~Dg~I~  598 (894)
                      +.+-...|+.+...|.|.
T Consensus       143 i~~g~~sly~a~t~G~vl  160 (354)
T KOG4649|consen  143 IAPGDGSLYAAITAGAVL  160 (354)
T ss_pred             ecCCCceEEEEeccceEE
Confidence            555333344444445443

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.57  E-value=3.5e-05  Score=81.30  Aligned_cols=127  Identities=16%  Similarity=0.136  Sum_probs=79.9

Q ss_pred             ceEEEEEecCCCEEEEEECC--------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        478 PINDMQFSKDATMFITASKD--------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D--------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                      ....+++.++|++.++....        |.|..++.. ++....+..-.....|+|+||++.|+++......        
T Consensus        87 ~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~--------  157 (246)
T PF08450_consen   87 RPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGR--------  157 (246)
T ss_dssp             EEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTE--------
T ss_pred             CCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccce--------
Confidence            46677777777766655433        456677766 6655555555678899999999999877665542        


Q ss_pred             cceeeEEEEeccc--c-----ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeE
Q psy10063        550 VGKFDARFYHLIF--E-----EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSST  618 (894)
Q Consensus       550 ~~~~~v~vwd~~~--~-----~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~  618 (894)
                           |..+++..  +     +.+..+....+..-.+++..+|++.++.-..+.|.+++.+ ++.+.    ....+..++
T Consensus       158 -----i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~  231 (246)
T PF08450_consen  158 -----IWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCA  231 (246)
T ss_dssp             -----EEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEE
T ss_pred             -----eEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEE
Confidence                 44455432  1     1122233333457889999999988887788999999987 44221    124555666


Q ss_pred             E
Q psy10063        619 Q  619 (894)
Q Consensus       619 ~  619 (894)
                      |
T Consensus       232 f  232 (246)
T PF08450_consen  232 F  232 (246)
T ss_dssp             E
T ss_pred             E
Confidence            6

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.56  E-value=3.6e-05  Score=81.15  Aligned_cols=95  Identities=15%  Similarity=0.035  Sum_probs=62.6

Q ss_pred             eEEEeeCCCCCEEE-EecCCCcEEEEEccCCce-------eeccccC---CCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063        763 GFKMPEPPKREKLA-LALADKVSERYRDRKNKA-------TAGFLLS---CPDFLFDFDTTREVTTTSTKVGKFDARFYH  831 (894)
Q Consensus       763 v~~la~spdg~~La-tgs~Dg~I~iwd~~~~~~-------~~~~~~~---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd  831 (894)
                      ...|+|+||++.|+ +-+..+.|..|++.....       +..+...   ...+++..+|...++....+    .|.+++
T Consensus       136 pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~----~I~~~~  211 (246)
T PF08450_consen  136 PNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGG----RIVVFD  211 (246)
T ss_dssp             EEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTT----EEEEEE
T ss_pred             ccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCC----EEEEEC
Confidence            46788899988765 556777788888753221       1112222   33578888897666554444    599999


Q ss_pred             cCCcceeeeccCCCCCeeEEEEe-eCCcEEEE
Q psy10063        832 LIFEEEFARIKGHFGPINSLAFH-PDGKSYAS  862 (894)
Q Consensus       832 ~~tg~~l~~l~gH~~~V~~l~fS-pdg~~LaS  862 (894)
                      .+ |+++..+......+++++|. +|.+.|+.
T Consensus       212 p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~v  242 (246)
T PF08450_consen  212 PD-GKLLREIELPVPRPTNCAFGGPDGKTLYV  242 (246)
T ss_dssp             TT-SCEEEEEE-SSSSEEEEEEESTTSSEEEE
T ss_pred             CC-ccEEEEEcCCCCCEEEEEEECCCCCEEEE
Confidence            88 98888887665689999995 56555543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.56  E-value=3.8e-05  Score=80.37  Aligned_cols=140  Identities=19%  Similarity=0.117  Sum_probs=92.8

Q ss_pred             CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063        429 AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       429 ~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~  508 (894)
                      ++|.|..||..+|+.+........  +        +             ...+. ..+++.+|++++.++.|..||..+|
T Consensus         1 ~~g~l~~~d~~tG~~~W~~~~~~~--~--------~-------------~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG   56 (238)
T PF13360_consen    1 DDGTLSALDPRTGKELWSYDLGPG--I--------G-------------GPVAT-AVPDGGRVYVASGDGNLYALDAKTG   56 (238)
T ss_dssp             -TSEEEEEETTTTEEEEEEECSSS--C--------S-------------SEEET-EEEETTEEEEEETTSEEEEEETTTS
T ss_pred             CCCEEEEEECCCCCEEEEEECCCC--C--------C-------------Cccce-EEEeCCEEEEEcCCCEEEEEECCCC
Confidence            368999999999999887754211  0        0             12211 2235667778889999999999999


Q ss_pred             cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc-cCCC---CCeEEEEEecC
Q psy10063        509 QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI-KGHF---GPINSLAFHPD  584 (894)
Q Consensus       509 ~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-~~h~---~~V~~l~~spd  584 (894)
                      +.+..+.....+.... ..++..|+++..++.              |+.+|..+|+.+..+ ....   .....+....+
T Consensus        57 ~~~W~~~~~~~~~~~~-~~~~~~v~v~~~~~~--------------l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~  121 (238)
T PF13360_consen   57 KVLWRFDLPGPISGAP-VVDGGRVYVGTSDGS--------------LYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD  121 (238)
T ss_dssp             EEEEEEECSSCGGSGE-EEETTEEEEEETTSE--------------EEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE
T ss_pred             CEEEEeecccccccee-eecccccccccceee--------------eEecccCCcceeeeeccccccccccccccCceEe
Confidence            9998888654433322 334556677776664              778888888887763 3221   11223333334


Q ss_pred             CCEEEEEeCCCcEEEEECCCCcc
Q psy10063        585 GKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       585 g~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                      +..|+.+..++.|+.+|+++++.
T Consensus       122 ~~~~~~~~~~g~l~~~d~~tG~~  144 (238)
T PF13360_consen  122 GDRLYVGTSSGKLVALDPKTGKL  144 (238)
T ss_dssp             TTEEEEEETCSEEEEEETTTTEE
T ss_pred             cCEEEEEeccCcEEEEecCCCcE
Confidence            78888888899999999987764

...

>KOG4190|consensus

Probab=98.56  E-value=2.1e-07  Score=100.35  Aligned_cols=185  Identities=15%  Similarity=0.160  Sum_probs=139.4

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-------CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM-------GRELESISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-------g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      .+.||...|++++--....-+++++.|++|++|.++.       ..+...+..|++ +|..+.|..+-++++++...-++
T Consensus       730 nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk-~i~~igfL~~lr~i~ScD~giHl  808 (1034)
T KOG4190|consen  730 NFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKK-PIHDIGFLADLRSIASCDGGIHL  808 (1034)
T ss_pred             cccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccC-cccceeeeeccceeeeccCccee
Confidence            6789999999998877788899999999999999853       236778889999 99999999999999887644333


Q ss_pred             ---------------------cceEEEEEecCCCEEEE-EECCCCEEEEEcCCCcEEEEEeC------CCCeeEEEEcCC
Q psy10063        477 ---------------------EPINDMQFSKDATMFIT-ASKDHTAKLFTTHDRQLLKTYTT------ERPVNSAALSPI  528 (894)
Q Consensus       477 ---------------------~~V~~l~~spdg~~L~s-gs~Dg~V~iwdl~~~~~~~~~~~------~~~v~~l~~spd  528 (894)
                                           +.|.|+.-- +..+|+. |+...+|+++|.+.++....++.      ..-+.+++..+.
T Consensus       809 WDPFigr~Laq~~dapk~~a~~~ikcl~nv-~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~  887 (1034)
T KOG4190|consen  809 WDPFIGRLLAQMEDAPKEGAGGNIKCLENV-DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK  887 (1034)
T ss_pred             ecccccchhHhhhcCcccCCCceeEecccC-cchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence                                 233333211 3334444 47889999999999887776653      245899999999


Q ss_pred             CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEE-EECCCC
Q psy10063        529 LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLIS-NTLSNG  605 (894)
Q Consensus       529 g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~v-wdl~~~  605 (894)
                      |.+|+++-..|.              |.+.|.+.|+.+...+...-....++ .|..+.|+....|..+.| |-...+
T Consensus       888 GN~lAa~LSnGc--------------i~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldg  950 (1034)
T KOG4190|consen  888 GNKLAAALSNGC--------------IAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDG  950 (1034)
T ss_pred             cchhhHHhcCCc--------------EEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCC
Confidence            999999999987              77888888888776554443444444 255667888788888888 865444

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.55  E-value=9.6e-07  Score=89.53  Aligned_cols=160  Identities=18%  Similarity=0.218  Sum_probs=90.4

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe-----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR-----ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~-----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ....|++|.|..-|.||++|...|.|.+|.-....     ....|++|.. .         -.||-+..-.   +.|..|
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~-E---------FDYLkSleie---EKin~I   91 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHEL-E---------FDYLKSLEIE---EKINAI   91 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhccccc-c---------hhhhhhccHH---HHhhhe
Confidence            45789999999999999999999999999864332     2334555543 1         1111111111   257777


Q ss_pred             EEecCCC--EEEEEECCCCEEEEEcCCCcEEEEEe----------CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063        483 QFSKDAT--MFITASKDHTAKLFTTHDRQLLKTYT----------TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       483 ~~spdg~--~L~sgs~Dg~V~iwdl~~~~~~~~~~----------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~  550 (894)
                      .|..++.  .++....|+.|++|.+....+...-+          .++++.+.    ..-++--.+....+         
T Consensus        92 ~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~----~~l~lprls~hd~i---------  158 (460)
T COG5170          92 EWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTST----KELLLPRLSEHDEI---------  158 (460)
T ss_pred             eeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCH----HHhhcccccccceE---------
Confidence            7776543  56666789999999987543221111          01111111    00000000000000         


Q ss_pred             ceeeEEEEeccccceEEE-ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        551 GKFDARFYHLIFEEEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~-l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                          |..      ++.+. -..|...|.+|.|..|.+.++++ .|-.|.+|.++-
T Consensus       159 ----iaa------~p~rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i  202 (460)
T COG5170         159 ----IAA------KPCRVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEI  202 (460)
T ss_pred             ----EEe------ccceeccccceeEeeeeeecCchheeeec-cceeeeeccccc
Confidence                111      01111 14577889999999998888775 467899998753

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.55  E-value=1.4e-07  Score=67.97  Aligned_cols=39  Identities=38%  Similarity=0.652  Sum_probs=37.1

Q ss_pred             cceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        835 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       835 g~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      |+++..+.+|.+.|.+|+|+|++.+|++++.|+.|+|||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.49  E-value=6.5e-05  Score=87.41  Aligned_cols=118  Identities=11%  Similarity=-0.017  Sum_probs=75.7

Q ss_pred             EEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCC--------------CCceeEEEeecCCcceee
Q psy10063        774 KLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTK--------------VGKFDARFYHLIFEEEFA  839 (894)
Q Consensus       774 ~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~--------------~g~~~I~vwd~~tg~~l~  839 (894)
                      ++++++.+|.+..+|.++++.+.........+..++  ..+++.....              .....|.-+|+.+|+.+-
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W  380 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEVEQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVW  380 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEeeccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEee
Confidence            567788888899999999888776554323333333  3333322110              001147888888888775


Q ss_pred             eccCC--C------CCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        840 RIKGH--F------GPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       840 ~l~gH--~------~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .....  .      .+...-...-.+.+|+.++.||.|+.+|.++++.+.+++++..+...|
T Consensus       381 ~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~~~a~P  442 (488)
T cd00216         381 EKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRTPSGIQATP  442 (488)
T ss_pred             EeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEECCCCceEcC
Confidence            54322  1      111111122356788899999999999999999999999887776665

The alignment model contains an 8-bladed beta-propeller.

>KOG2066|consensus

Probab=98.48  E-value=1.9e-06  Score=98.09  Aligned_cols=178  Identities=17%  Similarity=0.236  Sum_probs=127.1

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      .+.+.|++++  +++|+.|..+|.|++++.. |.. +....|..                         .      .-+|
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~-------------------------~------~~~G   83 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSS-------------------------S------ILEG   83 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecC-Ccc-cccccccc-------------------------c------ccCC
Confidence            3567777776  6799999999999999965 443 33334443                         1      3479


Q ss_pred             CEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC-----CCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        489 TMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPI-----LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spd-----g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +++++|+.||.|.|-.+-+.+....+..+.++.+++++|+     .+++++||..| +.++          -|-|--. .
T Consensus        84 ey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~----------er~wlgn-k  151 (846)
T KOG2066|consen   84 EYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS----------ERNWLGN-K  151 (846)
T ss_pred             ceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEe----------hhhhhcC-c
Confidence            9999999999999999999999999999999999999998     56788887776 3322          1112111 1


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----------CCCceeeeEECcCCcEEEecCCeE
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----------EGSFTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----------~~~~v~~~~~spdg~~l~~~~g~i  633 (894)
                      ..+ .+....+.|.++.|.  |.+||-++.+| |+|||+..++.+.          ...+...+.|.++..++.+-+..+
T Consensus       152 ~~v-~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d~v  227 (846)
T KOG2066|consen  152 DSV-VLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGDSV  227 (846)
T ss_pred             cce-eeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecCCeE
Confidence            111 355667899999994  77888887766 8999998876442          233455677777777666555555


Q ss_pred             EEEe
Q psy10063        634 HSLS  637 (894)
Q Consensus       634 ~~~~  637 (894)
                      ....
T Consensus       228 ~i~~  231 (846)
T KOG2066|consen  228 KICS  231 (846)
T ss_pred             EEEE
Confidence            4444

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.48  E-value=2.9e-05  Score=81.27  Aligned_cols=94  Identities=19%  Similarity=0.171  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCCcEEEEEeCCCCeeEEE--EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC
Q psy10063        497 DHTAKLFTTHDRQLLKTYTTERPVNSAA--LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  574 (894)
Q Consensus       497 Dg~V~iwdl~~~~~~~~~~~~~~v~~l~--~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~  574 (894)
                      +|.|..||+++|+.+........+....  ..+++.+|+++..++.              |..||..+|+.+..+.. .+
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------l~~~d~~tG~~~W~~~~-~~   66 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGN--------------LYALDAKTGKVLWRFDL-PG   66 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSE--------------EEEEETTTSEEEEEEEC-SS
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCE--------------EEEEECCCCCEEEEeec-cc
Confidence            6889999999999998887632222222  3446778888877765              78889888888776654 22


Q ss_pred             CeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        575 PINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .+..... .++..|+.+..++.|+.+|..+++
T Consensus        67 ~~~~~~~-~~~~~v~v~~~~~~l~~~d~~tG~   97 (238)
T PF13360_consen   67 PISGAPV-VDGGRVYVGTSDGSLYALDAKTGK   97 (238)
T ss_dssp             CGGSGEE-EETTEEEEEETTSEEEEEETTTSC
T ss_pred             cccceee-ecccccccccceeeeEecccCCcc
Confidence            2211122 234566777788899999987765

...

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.47  E-value=3.7e-05  Score=87.20  Aligned_cols=108  Identities=7%  Similarity=-0.056  Sum_probs=71.1

Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC-CCeeE
Q psy10063        772 REKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-GPINS  850 (894)
Q Consensus       772 g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-~~V~~  850 (894)
                      +..|++++.++.+..+|..+++.+........ ..+..++..++++..++    .|+.+|.++|+.+-....-. ....+
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~~~~~~vy~~~~~g----~l~ald~~tG~~~W~~~~~~~~~~~s  330 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKREYGSV-NDFAVDGGRIYLVDQND----RVYALDTRGGVELWSQSDLLHRLLTA  330 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-cCcEEECCEEEEEcCCC----eEEEEECCCCcEEEcccccCCCcccC
Confidence            34566667788888899888887665443221 11234566777776665    59999999988764332111 11222


Q ss_pred             EEEeeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063        851 LAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       851 l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      ..+.  +.+|+.++.||.|++.|..+++.+.++++.
T Consensus       331 p~v~--~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~  364 (394)
T PRK11138        331 PVLY--NGYLVVGDSEGYLHWINREDGRFVAQQKVD  364 (394)
T ss_pred             CEEE--CCEEEEEeCCCEEEEEECCCCCEEEEEEcC
Confidence            2222  456778889999999999999988887763

>KOG4532|consensus

Probab=98.45  E-value=9.1e-06  Score=81.24  Aligned_cols=167  Identities=11%  Similarity=0.009  Sum_probs=113.0

Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------------------cceEE
Q psy10063        423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---------------------EPIND  481 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------------------~~V~~  481 (894)
                      .|..++.|.++++.+++-+.....+....- -+.++++++|++++++.++...+                     ..-.+
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~~~~h~~~~-~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~  208 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNKFAVHNQNL-TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFY  208 (344)
T ss_pred             ceeeccCCcceeEEEEecCcccceeecccc-ceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCcee
Confidence            567778888999998875543333322212 48899999999999999887766                     23346


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe------CCCCeeEEEEcCCCC--EEEEEECCCCeEEEeccCcccee
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT------TERPVNSAALSPILP--HVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~------~~~~v~~l~~spdg~--~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      ..|+....++|++..||.+.|||++.........      |.+.++.+.|++.|.  +|+..-..+.             
T Consensus       209 ~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~-------------  275 (344)
T KOG4532|consen  209 NSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSR-------------  275 (344)
T ss_pred             eeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcce-------------
Confidence            7788888899999999999999999766544332      458899999998764  3333333332             


Q ss_pred             eEEEEeccccceEEEc-------cCCC-CCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        554 DARFYHLIFEEEFARI-------KGHF-GPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l-------~~h~-~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                       +.+.|++.++..+.+       ..|. ..|..-.|+.++..+.+..++ .+.-|++...
T Consensus       276 -~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~sr  333 (344)
T KOG4532|consen  276 -VHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSR  333 (344)
T ss_pred             -EEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccch-hhheeecccc
Confidence             667777766544432       1232 347777888777766666554 3555666543

>KOG0309|consensus

Probab=98.44  E-value=5.9e-07  Score=100.42  Aligned_cols=221  Identities=14%  Similarity=0.166  Sum_probs=140.1

Q ss_pred             ceeeeeccCccE---EEecCCCeEEEEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCe-EEEEecCCCCCCe
Q psy10063        381 DRLNSMSPAARK---LATNAEPVVKMQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGR-ELESISGHAKEPI  455 (894)
Q Consensus       381 ~~~~~~s~dg~~---l~~~~~~~~~~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~-~~~~l~~h~~~~V  455 (894)
                      +.++..+++..+   ||......+.+.+.||...|..+-|.|+.. .|++++.|-.|..||+++.. .+..+..-.. .-
T Consensus        83 ~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s-~a  161 (1081)
T KOG0309|consen   83 YWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRS-AA  161 (1081)
T ss_pred             eeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccc-cC
Confidence            344455555443   345566788899999999999999999764 88999999999999997653 2333332222 33


Q ss_pred             eEEEEcCC-CCEEE--------E----------EeCCCCccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCc--EEEE
Q psy10063        456 NDMQFSKD-ATMFI--------T----------ASHSQAVEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQ--LLKT  513 (894)
Q Consensus       456 ~~v~~spd-g~~la--------~----------~~~d~~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~--~~~~  513 (894)
                      ..|+|.-. +..||        +          ++..+++..|..++|.. .-..+.+++.||+|++||.....  ..+.
T Consensus       162 sqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~  241 (1081)
T KOG0309|consen  162 SQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRT  241 (1081)
T ss_pred             ceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccccee
Confidence            34444321 11111        1          11223445666777755 23457889999999999987543  3344


Q ss_pred             EeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCC------
Q psy10063        514 YTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGK------  586 (894)
Q Consensus       514 ~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~------  586 (894)
                      +....+|..-+|-|-|+-.+..-..|...+..+.....   ...|++.. .+.++.|.||...|..+.|-..+.      
T Consensus       242 vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~---d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d  318 (1081)
T KOG0309|consen  242 VTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENS---DLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYD  318 (1081)
T ss_pred             ccccCcceeccccccCceeEeccccCCeeeeeccccch---hhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCC
Confidence            44567788888888776555444333322222211111   22333332 367899999999998887754222      


Q ss_pred             ----EEEEEeCCCcEEEEECCCC
Q psy10063        587 ----SYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       587 ----~l~sgs~Dg~I~vwdl~~~  605 (894)
                          .|++-+.|..||+|.+...
T Consensus       319 ~rdfQLVTWSkD~~lrlWpI~~~  341 (1081)
T KOG0309|consen  319 SRDFQLVTWSKDQTLRLWPIDSQ  341 (1081)
T ss_pred             ccceeEEEeecCCceEeeeccHH
Confidence                6999999999999988643

>KOG1920|consensus

Probab=98.44  E-value=6.6e-05  Score=89.51  Aligned_cols=184  Identities=16%  Similarity=0.135  Sum_probs=127.3

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------------  476 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------  476 (894)
                      .+.|.++.|.-++..|+.+..+|.|.+-|.++...  .+-|.-..+|.+++|+||++.++.....+.+            
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~--eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E  145 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLEL--EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAE  145 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccce--eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhc
Confidence            36899999999999999998999999998776643  2333333489999999999998887765444            


Q ss_pred             --------------------------------------------------cceEEEEEecCCCEEEEEE-----CCCCEE
Q psy10063        477 --------------------------------------------------EPINDMQFSKDATMFITAS-----KDHTAK  501 (894)
Q Consensus       477 --------------------------------------------------~~V~~l~~spdg~~L~sgs-----~Dg~V~  501 (894)
                                                                        ..=.+|.|--||+++|+..     .-+.|+
T Consensus       146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir  225 (1265)
T KOG1920|consen  146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIR  225 (1265)
T ss_pred             cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence                                                              0112488999999998832     227899


Q ss_pred             EEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec---cccceEEEccCCCCCeE
Q psy10063        502 LFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL---IFEEEFARIKGHFGPIN  577 (894)
Q Consensus       502 iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~---~~~~~~~~l~~h~~~V~  577 (894)
                      |||-+ |.+-..-.. .+.-.+++|-|.|..|++-.....-.           +|.++.-   +.|+....+......|.
T Consensus       226 V~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~-----------~IvffErNGL~hg~f~l~~p~de~~ve  293 (1265)
T KOG1920|consen  226 VYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDS-----------DIVFFERNGLRHGEFVLPFPLDEKEVE  293 (1265)
T ss_pred             Eeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCC-----------cEEEEecCCccccccccCCcccccchh
Confidence            99977 544333222 34457899999999998865544310           2555542   22333333344445589


Q ss_pred             EEEEecCCCEEEE---EeCCCcEEEEECCCCc
Q psy10063        578 SLAFHPDGKSYAS---GGEDGFLISNTLSNGL  606 (894)
Q Consensus       578 ~l~~spdg~~l~s---gs~Dg~I~vwdl~~~~  606 (894)
                      .|+|..++..|+.   ......|++|-+....
T Consensus       294 ~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  294 ELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             eeeecCCCCceeeeecccccceEEEEEecCeE
Confidence            9999999998887   4444559999876543

>KOG4649|consensus

Probab=98.42  E-value=0.00033  Score=70.12  Aligned_cols=147  Identities=11%  Similarity=0.044  Sum_probs=94.4

Q ss_pred             ccCCCccccCCCccceeeeeccCccEEEecCCC-eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        367 FLSSSPILSSPLSVDRLNSMSPAARKLATNAEP-VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      ....+|..........+..-|+.++.++..... .+. +-..-..+|-+-+.- -|++++.|+..|.+++.++.+|+++.
T Consensus        10 CVDaspLVV~~dskT~v~igSHs~~~~avd~~sG~~~-We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w   87 (354)
T KOG4649|consen   10 CVDASPLVVCNDSKTLVVIGSHSGIVIAVDPQSGNLI-WEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIW   87 (354)
T ss_pred             hccCCcEEEecCCceEEEEecCCceEEEecCCCCcEE-eehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhhee
Confidence            344455555555555555666666666544322 221 111122333333332 47789999999999999999998877


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCC-eeEEE
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERP-VNSAA  524 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~-v~~l~  524 (894)
                      .+.....  |                       -......+++.+|..|+.|+.++..|.++..++...+..+. ..+-+
T Consensus        88 ~f~~~~~--v-----------------------k~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~  142 (354)
T KOG4649|consen   88 NFVILET--V-----------------------KVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPV  142 (354)
T ss_pred             eeeehhh--h-----------------------ccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccce
Confidence            7664432  1                       11223456899999999999999999999999988876543 45666


Q ss_pred             EcCCCCEEEEEECCCC
Q psy10063        525 LSPILPHVVLGGGQEA  540 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~  540 (894)
                      +.+-...|+++...|.
T Consensus       143 i~~g~~sly~a~t~G~  158 (354)
T KOG4649|consen  143 IAPGDGSLYAAITAGA  158 (354)
T ss_pred             ecCCCceEEEEeccce
Confidence            7774455666555554

>KOG2695|consensus

Probab=98.42  E-value=7.8e-07  Score=91.63  Aligned_cols=117  Identities=13%  Similarity=0.146  Sum_probs=96.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCC-----CcEEEEEeCCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccc
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHD-----RQLLKTYTTERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-----~~~~~~~~~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      .|.+++|...+.+|+.|+..|.|.++|++.     +.+.+.+.|+..|.++..-. ++++|++.+.+|.           
T Consensus       254 DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gk-----------  322 (425)
T KOG2695|consen  254 DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGK-----------  322 (425)
T ss_pred             hHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCc-----------
Confidence            577888888889999999999999999985     46778889999999998877 7889999988887           


Q ss_pred             eeeEEEEeccccce---EEEccCCCCCeEEEE--EecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        552 KFDARFYHLIFEEE---FARIKGHFGPINSLA--FHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       552 ~~~v~vwd~~~~~~---~~~l~~h~~~V~~l~--~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                         |++||++.-++   +....||-..-.-+-  ..+....|++++.|...|||.++.+..+
T Consensus       323 ---ikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl  381 (425)
T KOG2695|consen  323 ---IKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLL  381 (425)
T ss_pred             ---eeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCcee
Confidence               88999887766   888888866444433  3456678999999999999999887654

>KOG4532|consensus

Probab=98.41  E-value=4.7e-05  Score=76.30  Aligned_cols=114  Identities=12%  Similarity=-0.007  Sum_probs=78.0

Q ss_pred             eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc--------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCC
Q psy10063        763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL--------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF  834 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t  834 (894)
                      -++..|+.....+|++..||.+.|||++.........        .....+.|++-|..-+.....+.+  .+.|.|++.
T Consensus       206 gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs--~~hv~D~R~  283 (344)
T KOG4532|consen  206 GFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFS--RVHVVDTRN  283 (344)
T ss_pred             ceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcc--eEEEEEccc
Confidence            4577788888999999999999999998776543222        223345589877654444433332  488999988


Q ss_pred             cceeeecc-------CCC-CCeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063        835 EEEFARIK-------GHF-GPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       835 g~~l~~l~-------gH~-~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      ++....+.       .|. ..|..-.|+.++..+.+..++. +.-|++..+..
T Consensus       284 ~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~srsR  335 (344)
T KOG4532|consen  284 YVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILSRSR  335 (344)
T ss_pred             CceeeEEecCccccccccccccccccccCCCcccccccchh-hheeeccccce
Confidence            75443332       233 3388889999998888887765 66788766544

>KOG1832|consensus

Probab=98.37  E-value=4.2e-07  Score=103.29  Aligned_cols=197  Identities=18%  Similarity=0.218  Sum_probs=146.5

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC-c------
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA-V------  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~-i------  476 (894)
                      .+++|....+|++|+-+.++|+.|+..|.|++|++.+|.......+|.. .|..+.-+.||..+++.+.... .      
T Consensus      1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~S-avT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQS-AVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred             hhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccc-ccccccccCCcceeeeeccccCchHHHhcc
Confidence            5678999999999999999999999999999999999999999999998 9999999999988776554332 1      


Q ss_pred             ----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-eC----CCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        477 ----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY-TT----ERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       477 ----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-~~----~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                                ..-.++.|+.....-+.|.....+.|||++++..+..+ ..    ...-.+..|+|+..+|+-   +   
T Consensus      1175 ~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---d--- 1248 (1516)
T KOG1832|consen 1175 SSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---D--- 1248 (1516)
T ss_pred             ccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee---C---
Confidence                      35567778775444455555577899999998877653 22    223477889999887763   2   


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCC--ceeeeEE
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGS--FTSSSTQ  619 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~--~v~~~~~  619 (894)
                                   -.+||++..+.+++|...... -.-.|+|.|..++.-+     .|||+++.+.+..-.  ....+.|
T Consensus      1249 -------------GvLWDvR~~~aIh~FD~ft~~-~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ldqc~VtF 1309 (1516)
T KOG1832|consen 1249 -------------GVLWDVRIPEAIHRFDQFTDY-GGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLDQCAVTF 1309 (1516)
T ss_pred             -------------ceeeeeccHHHHhhhhhheec-ccccccCCCceEEeec-----hhhhhHHHHHHhcCccccceEEEe
Confidence                         358999988888887655422 2346999999888765     489999887664322  2234556


Q ss_pred             CcCCcEE
Q psy10063        620 QPDGLVY  626 (894)
Q Consensus       620 spdg~~l  626 (894)
                      ...|.++
T Consensus      1310 NstG~Vm 1316 (1516)
T KOG1832|consen 1310 NSTGDVM 1316 (1516)
T ss_pred             ccCccch
Confidence            5555544

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.35  E-value=0.0004  Score=74.00  Aligned_cols=80  Identities=19%  Similarity=0.185  Sum_probs=55.2

Q ss_pred             ceEeecCCCeEEEEecC------CCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEE-ecCCCcEEEEecC
Q psy10063        804 DFLFDFDTTREVTTTST------KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYAS-GGEDGFVRLHTFD  875 (894)
Q Consensus       804 ~~~fS~dg~~l~~as~d------~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS-~s~Dg~V~vWdl~  875 (894)
                      .+++++...+|++....      +.+.-+|.+||+++++.++++... .+|.+|+++.|.+ +|+. ...++.|.|||..
T Consensus       242 ~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~  320 (342)
T PF06433_consen  242 LIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAA  320 (342)
T ss_dssp             -EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETT
T ss_pred             eeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCc
Confidence            45676666666654321      112234999999999999998742 3588999999886 5544 4578999999999


Q ss_pred             ccccccccc
Q psy10063        876 QAYFDYTFD  884 (894)
Q Consensus       876 ~~~~~~~~~  884 (894)
                      +++++..++
T Consensus       321 tGk~~~~~~  329 (342)
T PF06433_consen  321 TGKLVRSIE  329 (342)
T ss_dssp             T--EEEEE-
T ss_pred             CCcEEeehh
Confidence            999888875

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.31  E-value=6.3e-05  Score=86.06  Aligned_cols=170  Identities=9%  Similarity=-0.012  Sum_probs=117.8

Q ss_pred             EccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----c------ceEEEEE-
Q psy10063        417 WGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----E------PINDMQF-  484 (894)
Q Consensus       417 ~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----~------~V~~l~~-  484 (894)
                      +++||+.|... -..+.+.+.|.++.+....+.-..  ....+++++||+++++.+.+...    .      .=..+.| 
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg--npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn  277 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG--NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN  277 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEEeCC--CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc
Confidence            34566655332 234668888888887776666433  45678999999999988743322    0      1122333 


Q ss_pred             -------ecCCCEEEEEECCCCEEEEEcCC-----CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        485 -------SKDATMFITASKDHTAKLFTTHD-----RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       485 -------spdg~~L~sgs~Dg~V~iwdl~~-----~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                             .++|++...  .++.|.++|.++     .+.+..+........+.++|||+++++++....            
T Consensus       278 i~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~------------  343 (635)
T PRK02888        278 IARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSP------------  343 (635)
T ss_pred             hHHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCC------------
Confidence                   446776665  367899999998     567777888889999999999999999887543            


Q ss_pred             eeEEEEeccccce------------EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        553 FDARFYHLIFEEE------------FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       553 ~~v~vwd~~~~~~------------~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                       .|.|+|+...+.            +....- ...-...+|.++|..+.+.-.|..|..|+++.
T Consensus       344 -tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        344 -TVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             -cEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence             266666665432            222222 22335678999998888888999999999976

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.31  E-value=0.0003  Score=76.26  Aligned_cols=95  Identities=15%  Similarity=-0.008  Sum_probs=51.7

Q ss_pred             EEEEecCCCEEEEEEC-CC--CEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        481 DMQFSKDATMFITASK-DH--TAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~-Dg--~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .=+|.+||++|+.++. ||  .+.+.||.+++..+.-.+. .......++++++.|+.......              |+
T Consensus        40 ~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~--------------l~  105 (386)
T PF14583_consen   40 QNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRS--------------LR  105 (386)
T ss_dssp             S--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTE--------------EE
T ss_pred             CCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCe--------------EE
Confidence            3457788876666554 54  4667799999998887764 33446778898888876554443              77


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEe--cCCCEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFH--PDGKSYA  589 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~s--pdg~~l~  589 (894)
                      ..|+++++....+......+-...|.  .|+..++
T Consensus       106 ~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~  140 (386)
T PF14583_consen  106 RVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLV  140 (386)
T ss_dssp             EEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred             EEECCcCcEEEEEECCcccccccceeeCCCccEEE
Confidence            77888877655555556666555664  3455544

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.30  E-value=2e-06  Score=61.90  Aligned_cols=39  Identities=36%  Similarity=0.541  Sum_probs=36.5

Q ss_pred             cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       563 ~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      +++++.+.+|.+.|.+|+|+|++.+|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            356788899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.30  E-value=0.00011  Score=81.78  Aligned_cols=90  Identities=13%  Similarity=0.067  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc-cC----
Q psy10063        497 DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI-KG----  571 (894)
Q Consensus       497 Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-~~----  571 (894)
                      .+.+.|||+.+++..........+....|||+|+.|+......               |.++++..++..+.- .|    
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~~n---------------ly~~~~~~~~~~~lT~dg~~~i   86 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRDNN---------------LYLRDLATGQETQLTTDGEPGI   86 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEETTE---------------EEEESSTTSEEEESES--TTTE
T ss_pred             ceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEecCc---------------eEEEECCCCCeEEeccccceeE
Confidence            4578999999987776555567899999999999999987654               566666555333211 11    


Q ss_pred             ---C---------CCCeEEEEEecCCCEEEEEeCC-CcEEEEE
Q psy10063        572 ---H---------FGPINSLAFHPDGKSYASGGED-GFLISNT  601 (894)
Q Consensus       572 ---h---------~~~V~~l~~spdg~~l~sgs~D-g~I~vwd  601 (894)
                         -         -+.-..+.|||||++|+....| ..|+.+.
T Consensus        87 ~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~  129 (353)
T PF00930_consen   87 YNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYP  129 (353)
T ss_dssp             EESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEE
T ss_pred             EcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEE
Confidence               0         1223568899999988876543 3444443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG1645|consensus

Probab=98.28  E-value=8.2e-05  Score=78.66  Aligned_cols=92  Identities=13%  Similarity=0.113  Sum_probs=72.6

Q ss_pred             EEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeE
Q psy10063        500 AKLFTTHDRQLLKTYTT-ERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN  577 (894)
Q Consensus       500 V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~  577 (894)
                      |++.+-.+.+.++.+.. ...|..++|||... +|..++.+..              |+|.|+++...+..+..| ..++
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nk--------------iki~dlet~~~vssy~a~-~~~w  239 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNK--------------IKIMDLETSCVVSSYIAY-NQIW  239 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCce--------------EEEEecccceeeeheecc-CCce
Confidence            78887777776664443 46799999999988 4555555554              899999998888888777 7899


Q ss_pred             EEEEecCCC-EEEEEeCCCcEEEEECCCCc
Q psy10063        578 SLAFHPDGK-SYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       578 ~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +++|.-|.+ +|+.|...|.|.|||++..+
T Consensus       240 SC~wDlde~h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  240 SCCWDLDERHVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             eeeeccCCcceeEEeccCceEEEEEccCCC
Confidence            999998765 67788889999999998654

>KOG4190|consensus

Probab=98.28  E-value=3.8e-06  Score=90.96  Aligned_cols=242  Identities=17%  Similarity=0.163  Sum_probs=147.6

Q ss_pred             EeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCC-C------cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        470 ASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHD-R------QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       470 ~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-~------~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      +..-|+...|+.++--.+...+++++.|++|++|.++. |      .|...+. |..+|.++.|-.+-++++++  |+. 
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~g-  805 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGG-  805 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCc-
Confidence            33334444666666556677899999999999999873 1      2344444 57889999999998887765  343 


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEcc-----CCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCccccCCCcee
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIK-----GHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGLDISEGSFTS  615 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-----~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~~~~~~~~v~  615 (894)
                                   |.+||.--++.+..+.     +..+.|.|+.- -+..+|+.| +...+|+++|.+..+-.       
T Consensus       806 -------------iHlWDPFigr~Laq~~dapk~~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~-------  864 (1034)
T KOG4190|consen  806 -------------IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWT-------  864 (1034)
T ss_pred             -------------ceeecccccchhHhhhcCcccCCCceeEeccc-Ccchheeeeccchhhheeeecccccce-------
Confidence                         7888877776665332     11223333321 133333333 56778888886543200       


Q ss_pred             eeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCccee
Q psy10063        616 SSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  695 (894)
Q Consensus       616 ~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  695 (894)
                                        ..|..                                                         
T Consensus       865 ------------------~E~kV---------------------------------------------------------  869 (1034)
T KOG4190|consen  865 ------------------CELKV---------------------------------------------------------  869 (1034)
T ss_pred             ------------------eeEEe---------------------------------------------------------
Confidence                              00000                                                         


Q ss_pred             EeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE
Q psy10063        696 ELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL  775 (894)
Q Consensus       696 ~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L  775 (894)
                                                                                .-..++...+.++++.+.|.+|
T Consensus       870 ----------------------------------------------------------cna~~Pna~~R~iaVa~~GN~l  891 (1034)
T KOG4190|consen  870 ----------------------------------------------------------CNAPGPNALTRAIAVADKGNKL  891 (1034)
T ss_pred             ----------------------------------------------------------ccCCCCchheeEEEeccCcchh
Confidence                                                                      0012234456789999999999


Q ss_pred             EEecCCCcEEEEEccCCceeecccc-CCCceE-eecCCCeEEEEecCCCCceeEEE-eecCCcceeeeccCCCCCeeEEE
Q psy10063        776 ALALADKVSERYRDRKNKATAGFLL-SCPDFL-FDFDTTREVTTTSTKVGKFDARF-YHLIFEEEFARIKGHFGPINSLA  852 (894)
Q Consensus       776 atgs~Dg~I~iwd~~~~~~~~~~~~-~~~~~~-fS~dg~~l~~as~d~~g~~~I~v-wd~~tg~~l~~l~gH~~~V~~l~  852 (894)
                      |.+-..|.|.+.|.+.++.+-.+.. .+.-+. -.|..+.++....+.    .+.| |..-.|......+....+..-+ 
T Consensus       892 Aa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldH----slaVnWhaldgimh~q~kpppepahfl-  966 (1034)
T KOG4190|consen  892 AAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDH----SLAVNWHALDGIMHLQDKPPPEPAHFL-  966 (1034)
T ss_pred             hHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccc----eeEeeehhcCCeeeeccCCCCcchhhh-
Confidence            9999999999999999987654432 222221 244555566555554    4677 8877776665555333322111 


Q ss_pred             EeeCCcEEEEecCCCcEEEEec
Q psy10063        853 FHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       853 fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                       -.-|..|+++-....+.||.-
T Consensus       967 -qsvgpSLV~a~~Gn~lgVYad  987 (1034)
T KOG4190|consen  967 -QSVGPSLVTAQNGNILGVYAD  987 (1034)
T ss_pred             -hccCceeEEeccCcEEEEEec
Confidence             122566777777777788753

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.26  E-value=8.8e-05  Score=83.60  Aligned_cols=111  Identities=15%  Similarity=0.109  Sum_probs=75.4

Q ss_pred             ceEEEEEecCCCEEEEEE---CC-CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITAS---KD-HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs---~D-g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      .+..-+|+++++.|+..+   .. ..|.++|+..++........+.-...+|+|||++|+.+.....           ..
T Consensus       194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg-----------~~  262 (425)
T COG0823         194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDG-----------SP  262 (425)
T ss_pred             ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCC-----------Cc
Confidence            344555666666544432   22 4589999999988888777777788999999999988776542           23


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEE
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE-DGFLISN  600 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vw  600 (894)
                      +|.++|+..+... +|..-.+.-..-.|+|||++|+..+. .|.-.||
T Consensus       263 ~iy~~dl~~~~~~-~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~  309 (425)
T COG0823         263 DIYLMDLDGKNLP-RLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIY  309 (425)
T ss_pred             cEEEEcCCCCcce-ecccCCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence            5888888877633 34433343347789999998887653 4444444

>KOG2695|consensus

Probab=98.26  E-value=2.1e-06  Score=88.55  Aligned_cols=124  Identities=15%  Similarity=0.209  Sum_probs=91.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC-----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG-----RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg-----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .++.|.++.|.-.+.+|+.|+..|.|.++|++.+     .+.+.|. |..                         .|++|
T Consensus       251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~S-------------------------svtsl  304 (425)
T KOG2695|consen  251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDS-------------------------SVTSL  304 (425)
T ss_pred             cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCc-------------------------chhhh
Confidence            5578999999998999999999999999999865     1122221 222                         67777


Q ss_pred             EEec-CCCEEEEEECCCCEEEEEcCCCcE---EEEEeCC---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        483 QFSK-DATMFITASKDHTAKLFTTHDRQL---LKTYTTE---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       483 ~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~---~~~~~~~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      +.-. ++++|++.+.+|.|++||++--++   ++.++++   ..-.-+.+.+....|++++.|-.              .
T Consensus       305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcy--------------t  370 (425)
T KOG2695|consen  305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCY--------------T  370 (425)
T ss_pred             hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeE--------------E
Confidence            7766 788999999999999999997666   6666653   12223344556667777665553              8


Q ss_pred             EEEeccccceEEEccC
Q psy10063        556 RFYHLIFEEEFARIKG  571 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~  571 (894)
                      |||.++.|..+..++-
T Consensus       371 RiWsl~~ghLl~tipf  386 (425)
T KOG2695|consen  371 RIWSLDSGHLLCTIPF  386 (425)
T ss_pred             EEEecccCceeeccCC
Confidence            9999999998887754

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.25  E-value=0.00021  Score=76.11  Aligned_cols=142  Identities=15%  Similarity=0.121  Sum_probs=90.3

Q ss_pred             CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE
Q psy10063        431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL  510 (894)
Q Consensus       431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~  510 (894)
                      +.|+|+|.+.++.+..+....   .-.+.++||++.+.++.          .-|+.    +.=|-..-.|.+||.++.+.
T Consensus        17 ~rv~viD~d~~k~lGmi~~g~---~~~~~~spdgk~~y~a~----------T~~sR----~~rG~RtDvv~~~D~~TL~~   79 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDTGF---LGNVALSPDGKTIYVAE----------TFYSR----GTRGERTDVVEIWDTQTLSP   79 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEES---SEEEEE-TTSSEEEEEE----------EEEEE----TTEEEEEEEEEEEETTTTEE
T ss_pred             ceEEEEECCCCcEEEEeeccc---CCceeECCCCCEEEEEE----------EEEec----cccccceeEEEEEecCcCcc
Confidence            479999999999888887543   33456677776665432          11221    12234455799999999998


Q ss_pred             EEEEeCCC--------CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe
Q psy10063        511 LKTYTTER--------PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  582 (894)
Q Consensus       511 ~~~~~~~~--------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s  582 (894)
                      ...+....        ....++++.||+++++.-..-..            .|-|.|++.++.+.++.-. + ...+-=.
T Consensus        80 ~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~------------SVtVVDl~~~kvv~ei~~P-G-C~~iyP~  145 (342)
T PF06433_consen   80 TGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT------------SVTVVDLAAKKVVGEIDTP-G-CWLIYPS  145 (342)
T ss_dssp             EEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE------------EEEEEETTTTEEEEEEEGT-S-EEEEEEE
T ss_pred             cceEecCCcchheecccccceEEccCCcEEEEEccCCCC------------eEEEEECCCCceeeeecCC-C-EEEEEec
Confidence            88776432        12446788899888876543321            3889999999888776432 2 1222111


Q ss_pred             cCCCEEEEEeCCCcEEEEECCC
Q psy10063        583 PDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       583 pdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      . .+.|.+.+.||.+....++.
T Consensus       146 ~-~~~F~~lC~DGsl~~v~Ld~  166 (342)
T PF06433_consen  146 G-NRGFSMLCGDGSLLTVTLDA  166 (342)
T ss_dssp             E-TTEEEEEETTSCEEEEEETS
T ss_pred             C-CCceEEEecCCceEEEEECC
Confidence            2 24577888999998888764

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG4714|consensus

Probab=98.25  E-value=2.5e-06  Score=84.79  Aligned_cols=148  Identities=16%  Similarity=0.154  Sum_probs=95.5

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE----
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS----  495 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs----  495 (894)
                      -+..++++..||.+.+++.+.   +..+. |+- ++..+.                   --+.++...+.+|.++.    
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~---~~~~~-~~i-~~~~~~-------------------~as~~~~~~~~~i~s~~~g~~  155 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDK---DLALM-SRI-PSIHSG-------------------SASRKICRHGNSILSGGCGNW  155 (319)
T ss_pred             cCCceEecCCCceEEEEechH---HHhhh-hhc-cccccc-------------------ccccceeecccEEecCCcceE
Confidence            456899999999999999764   11111 110 111110                   01111122233333321    


Q ss_pred             -CCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE-EccCC
Q psy10063        496 -KDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA-RIKGH  572 (894)
Q Consensus       496 -~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~-~l~~h  572 (894)
                       .-+..++|+++-.+.+...+ ....|.+++-+|..+.+++++.++.+             +-+||++...... .++.|
T Consensus       156 n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~-------------~~l~d~rn~~~p~S~l~ah  222 (319)
T KOG4714|consen  156 NAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGI-------------VGLWDARNVAMPVSLLKAH  222 (319)
T ss_pred             eeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCe-------------EEEEEcccccchHHHHHHh
Confidence             23457778776544433222 23459999999988877777766654             8899988775433 46789


Q ss_pred             CCCeEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10063        573 FGPINSLAFHP-DGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       573 ~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +.+++.+.|+| ++..|+++++||.+..||..+
T Consensus       223 k~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  223 KAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             hhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            99999999998 577899999999999999764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.24  E-value=0.00013  Score=81.40  Aligned_cols=210  Identities=15%  Similarity=0.166  Sum_probs=121.4

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC----------------CCeeEEEEcCCCCEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK----------------EPINDMQFSKDATMF  467 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~----------------~~V~~v~~spdg~~l  467 (894)
                      .+......+....|||+|++|+... ++.|.++++..++..+.-.....                +.-..+.|||||++|
T Consensus        37 ~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~l  115 (353)
T PF00930_consen   37 PLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYL  115 (353)
T ss_dssp             ESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEE
T ss_pred             ECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEE
Confidence            3333367899999999999999985 57899999988755433221111                123578899999999


Q ss_pred             EEEeCCCCc-----------------------------------------------------------cceEEEEEecCC
Q psy10063        468 ITASHSQAV-----------------------------------------------------------EPINDMQFSKDA  488 (894)
Q Consensus       468 a~~~~d~~i-----------------------------------------------------------~~V~~l~~spdg  488 (894)
                      |....|...                                                           ..+..+.|.+++
T Consensus       116 a~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~  195 (353)
T PF00930_consen  116 AFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDG  195 (353)
T ss_dssp             EEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETT
T ss_pred             EEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCC
Confidence            987654322                                                           356778888888


Q ss_pred             CEEEEE--ECCC---CEEEEEcCCCcEEEEEe--CCCCe---eEEEEc-CCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        489 TMFITA--SKDH---TAKLFTTHDRQLLKTYT--TERPV---NSAALS-PILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       489 ~~L~sg--s~Dg---~V~iwdl~~~~~~~~~~--~~~~v---~~l~~s-pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +.|+..  .++.   .|.++|+.++++...+.  ....|   ..+.|. +++..++..+....           -..|.+
T Consensus       196 ~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-----------~~hly~  264 (353)
T PF00930_consen  196 KRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG-----------YRHLYL  264 (353)
T ss_dssp             EEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS-----------SEEEEE
T ss_pred             cEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC-----------CcEEEE
Confidence            744433  3332   35666777766544443  22322   345554 55555444433222           223777


Q ss_pred             EeccccceEEEccCCCCCeEE-EEEecCCCEEE-EEeCC----CcEEEEECC-CCc--cccCCCce-eeeEECcCCcEE
Q psy10063        558 YHLIFEEEFARIKGHFGPINS-LAFHPDGKSYA-SGGED----GFLISNTLS-NGL--DISEGSFT-SSSTQQPDGLVY  626 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~-l~~spdg~~l~-sgs~D----g~I~vwdl~-~~~--~~~~~~~v-~~~~~spdg~~l  626 (894)
                      ++...+. .+.|......|.. +.|+++++.|+ .+..+    ..|+.-+++ .+.  ++...... ..+.|+|+|+++
T Consensus       265 ~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~  342 (353)
T PF00930_consen  265 YDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYY  342 (353)
T ss_dssp             EETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEE
T ss_pred             Ecccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEE
Confidence            7777655 3455555566744 67888877655 44432    245555666 433  23333333 488899998876

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2066|consensus

Probab=98.24  E-value=3e-05  Score=88.59  Aligned_cols=139  Identities=12%  Similarity=0.165  Sum_probs=100.0

Q ss_pred             cCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-----CCEEEE
Q psy10063        419 NLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-----ATMFIT  493 (894)
Q Consensus       419 pdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-----g~~L~s  493 (894)
                      -+|.++++|+.||.|.|..+.+++....+..+.  +                        +.+|+++|+     .+++++
T Consensus        81 ~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~r--p------------------------iksial~Pd~~~~~sk~fv~  134 (846)
T KOG2066|consen   81 LEGEYVASCSDDGKVVIGSLFTDDEITQYDFKR--P------------------------IKSIALHPDFSRQQSKQFVS  134 (846)
T ss_pred             cCCceEEEecCCCcEEEeeccCCccceeEecCC--c------------------------ceeEEeccchhhhhhhheee
Confidence            369999999999999999999998888777665  3                        455555554     567888


Q ss_pred             EECCCCEEEEEcC---CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc
Q psy10063        494 ASKDHTAKLFTTH---DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK  570 (894)
Q Consensus       494 gs~Dg~V~iwdl~---~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~  570 (894)
                      |+..| |.++.-.   ....+......+.|.++.|.  |.+|+.+...|               |++||...++.+..+.
T Consensus       135 GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G---------------v~vyd~~~~~~l~~i~  196 (846)
T KOG2066|consen  135 GGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG---------------VKVYDTPTRQRLTNIP  196 (846)
T ss_pred             cCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC---------------cEEEeccccceeeccC
Confidence            88888 7776432   12222233357899999997  67899988888               8999999988887765


Q ss_pred             CCCCC------eEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        571 GHFGP------INSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       571 ~h~~~------V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      .....      -..+.|.++.+ |+.|-. -.|+|..++
T Consensus       197 ~p~~~~R~e~fpphl~W~~~~~-LVIGW~-d~v~i~~I~  233 (846)
T KOG2066|consen  197 PPSQSVRPELFPPHLHWQDEDR-LVIGWG-DSVKICSIK  233 (846)
T ss_pred             CCCCCCCcccCCCceEecCCCe-EEEecC-CeEEEEEEe
Confidence            43333      34577876554 555443 468888877

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.22  E-value=4.9e-05  Score=85.65  Aligned_cols=190  Identities=18%  Similarity=0.196  Sum_probs=114.0

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEe---cCC-CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITG---HAK-GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sg---s~D-g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      ......+..-...+..-+|+|+++.|+..   ... ..|+++|+..++..+.+....                       
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g-----------------------  238 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG-----------------------  238 (425)
T ss_pred             CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC-----------------------
Confidence            33444555566778888999999866543   333 469999999887655544211                       


Q ss_pred             CccceEEEEEecCCCEEEEE-ECCCC--EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        475 AVEPINDMQFSKDATMFITA-SKDHT--AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       475 ~i~~V~~l~~spdg~~L~sg-s~Dg~--V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                         .-...+|+|||++|+.+ ..||.  |.+.|+..+...+.-...+.-..-.|+|||++|+..+..+..          
T Consensus       239 ---~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~----------  305 (425)
T COG0823         239 ---NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGR----------  305 (425)
T ss_pred             ---ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCC----------
Confidence               12234566666655544 34444  566687777644422233444578899999999999876643          


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-Cc--EEEEECCCCcc---ccCCCceeeeEECcCCcE
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-GF--LISNTLSNGLD---ISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D-g~--I~vwdl~~~~~---~~~~~~v~~~~~spdg~~  625 (894)
                       -+|.+++++.+.. ..+....+.-....|+|||++|+..+.. |.  |.+.++..+..   +..........+.++|..
T Consensus       306 -p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~  383 (425)
T COG0823         306 -PQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRM  383 (425)
T ss_pred             -cceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCce
Confidence             2477788776654 3333333333378899999999887743 44  55555544431   112222334455566655


Q ss_pred             E
Q psy10063        626 Y  626 (894)
Q Consensus       626 l  626 (894)
                      +
T Consensus       384 i  384 (425)
T COG0823         384 I  384 (425)
T ss_pred             E
Confidence            5

>KOG3621|consensus

Probab=98.21  E-value=0.00044  Score=78.37  Aligned_cols=117  Identities=14%  Similarity=0.145  Sum_probs=80.3

Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-C-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-T-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      |.--+++..+++|+.|+.-|.|++|.-..++.+..-. + ++.+..++++++..++++|+..+.+.|+.+......-.  
T Consensus        36 v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~--  113 (726)
T KOG3621|consen   36 VKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL--  113 (726)
T ss_pred             EEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc--
Confidence            3334455668899999999999999877666544332 2 45567778888888888888777644433222111000  


Q ss_pred             EEeccccceEEEc-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        557 FYHLIFEEEFARI-KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       557 vwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                             ..+..+ +.|...|++++|++++..|++|...|.|.+-.++.
T Consensus       114 -------~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  114 -------DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             -------eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence                   011111 23778999999999999999999999999988876

>KOG4714|consensus

Probab=98.21  E-value=3.7e-05  Score=76.72  Aligned_cols=169  Identities=14%  Similarity=0.159  Sum_probs=88.6

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC-CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK-EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM  490 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~-~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~  490 (894)
                      |+.+.|+-+ ..|+.+..++.+..+....+.++.......+ ++..+++.+.            .+++-.  +.+--+..
T Consensus        39 ~~~~~~v~~-~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~s------------ep~p~~--~~s~~~t~  103 (319)
T KOG4714|consen   39 LSKVSLSAE-YILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNS------------EIDPND--ACTMTDNR  103 (319)
T ss_pred             EEEeechhh-heeecccchhheeeeccceEEEechhhcccCcCceeeeeccC------------CCCCcc--cccccCCc
Confidence            555555533 4677777777777776655555433322111 0222222111            011111  11223567


Q ss_pred             EEEEECCCCEEEEEcCCCcEE-EEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        491 FITASKDHTAKLFTTHDRQLL-KTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       491 L~sgs~Dg~V~iwdl~~~~~~-~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      ++++..||.+.+++.+.-..+ +.+.. +....+.++...+..|.+++ -+.   |....     ..+.|+++..+.+..
T Consensus       104 V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~-~g~---~n~~d-----~~~a~~~~p~~t~~~  174 (319)
T KOG4714|consen  104 VCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGG-CGN---WNAQD-----NFYANTLDPIKTLIP  174 (319)
T ss_pred             eEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCC-cce---Eeecc-----ceeeecccccccccc
Confidence            899999999999987752111 11111 12233344444555544432 111   11111     156777665544333


Q ss_pred             ccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10063        569 IKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSN  604 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~  604 (894)
                      -+.....|.+++-+|..+ .+++|+.||.+-+||++.
T Consensus       175 ~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn  211 (319)
T KOG4714|consen  175 SKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARN  211 (319)
T ss_pred             cccccccchhhhCCcccccEEEEecCCCeEEEEEccc
Confidence            233334589999998554 567788899999999864

>KOG1920|consensus

Probab=98.16  E-value=0.00054  Score=82.04  Aligned_cols=112  Identities=12%  Similarity=0.036  Sum_probs=75.5

Q ss_pred             EEeeCCCCCEEEEe-----cCCCcEEEEEccCCce-ee--ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC--
Q psy10063        765 KMPEPPKREKLALA-----LADKVSERYRDRKNKA-TA--GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF--  834 (894)
Q Consensus       765 ~la~spdg~~Latg-----s~Dg~I~iwd~~~~~~-~~--~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t--  834 (894)
                      .|.|--||+++|+.     ..-+.|+|||.+ +.+ ..  ....-...++|-|.|..+++.....+.+ +|.+|....  
T Consensus       200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~-~IvffErNGL~  277 (1265)
T KOG1920|consen  200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDS-DIVFFERNGLR  277 (1265)
T ss_pred             eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCC-cEEEEecCCcc
Confidence            56677777777762     233789999976 332 11  1122345788999999998887765543 588888542  


Q ss_pred             -cceeeeccCCCCCeeEEEEeeCCcEEEE---ecCCCcEEEEecCccc
Q psy10063        835 -EEEFARIKGHFGPINSLAFHPDGKSYAS---GGEDGFVRLHTFDQAY  878 (894)
Q Consensus       835 -g~~l~~l~gH~~~V~~l~fSpdg~~LaS---~s~Dg~V~vWdl~~~~  878 (894)
                       |+....+.....+|..|+|..++..||.   +.....|+||-+..-.
T Consensus       278 hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  278 HGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             ccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence             3333334444455999999999999988   6666669999986543

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.11  E-value=0.0013  Score=68.28  Aligned_cols=182  Identities=12%  Similarity=0.175  Sum_probs=106.5

Q ss_pred             EEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----
Q psy10063        403 MQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----  476 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----  476 (894)
                      +.+.+-...|++|+|.|+.+ ++++....+.|...+. .|+.++++.....+....|++..++.++++--+++.+     
T Consensus        15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            35667777899999999866 5566677788888886 4888888875544478889998887766655333332     


Q ss_pred             ------------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC---CcEEEEEe---------CCCCe
Q psy10063        477 ------------------------EPINDMQFSKDATMFITASKDHTAKLFTTHD---RQLLKTYT---------TERPV  520 (894)
Q Consensus       477 ------------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---~~~~~~~~---------~~~~v  520 (894)
                                              ..+-.|+|.+.++.|+.+-+..-.+||.+..   ...+....         .-..+
T Consensus        94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  173 (248)
T PF06977_consen   94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDL  173 (248)
T ss_dssp             ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS--
T ss_pred             eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccc
Confidence                                    3578899999888888887776677776653   22222211         12467


Q ss_pred             eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC---------CCCeEEEEEecCCCEEEEE
Q psy10063        521 NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---------FGPINSLAFHPDGKSYASG  591 (894)
Q Consensus       521 ~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h---------~~~V~~l~~spdg~~l~sg  591 (894)
                      .+++++|....|++-+.....             |..+| ..|+.+..+.-.         -...-.|+|.++|.+.+ .
T Consensus       174 S~l~~~p~t~~lliLS~es~~-------------l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-v  238 (248)
T PF06977_consen  174 SGLSYDPRTGHLLILSDESRL-------------LLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-V  238 (248)
T ss_dssp             -EEEEETTTTEEEEEETTTTE-------------EEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-E
T ss_pred             cceEEcCCCCeEEEEECCCCe-------------EEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-E
Confidence            899999998888887777654             44555 335444433211         13467899999986444 4


Q ss_pred             eCCCcEEEE
Q psy10063        592 GEDGFLISN  600 (894)
Q Consensus       592 s~Dg~I~vw  600 (894)
                      ++-...++|
T Consensus       239 sEpNlfy~f  247 (248)
T PF06977_consen  239 SEPNLFYRF  247 (248)
T ss_dssp             ETTTEEEEE
T ss_pred             cCCceEEEe
Confidence            566655554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.10  E-value=0.001  Score=72.28  Aligned_cols=183  Identities=11%  Similarity=0.003  Sum_probs=88.0

Q ss_pred             EEccCCCEEEEecC-C--CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE
Q psy10063        416 LWGNLDQYIITGHA-K--GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI  492 (894)
Q Consensus       416 ~~spdg~~L~sgs~-D--g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~  492 (894)
                      +|.+||++|+.++. |  ..+.+.|+.+++..+.-.+...                         ......++++.+.|+
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~-------------------------~~~g~~~s~~~~~~~   96 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGD-------------------------NTFGGFLSPDDRALY   96 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B--------------------------TTT-EE-TTSSEEE
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCC-------------------------CccceEEecCCCeEE
Confidence            67889976666543 4  4577888898886655443322                         122344556677776


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEE--cCCCCEEEEEECCCCeEEEeccC----------ccceeeEEEEe
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAAL--SPILPHVVLGGGQEAREVTTTST----------KVGKFDARFYH  559 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~--spdg~~l~~~~~~~~~~v~~~~~----------~~~~~~v~vwd  559 (894)
                      .......|+-.|+++++....+... ..+-...|  ..|+.+++-.-..+.  -|....          ......|...|
T Consensus        97 Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~--d~~~l~~~~~f~e~~~a~p~~~i~~id  174 (386)
T PF14583_consen   97 YVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISRE--DWKPLTKWKGFREFYEARPHCRIFTID  174 (386)
T ss_dssp             EEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGG--G-----SHHHHHHHHHC---EEEEEEE
T ss_pred             EEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeeh--hccCccccHHHHHHHhhCCCceEEEEE
Confidence            6656678888899998877777654 33434555  345665543321111  010000          00112366778


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCC-EEEEEeC---CCc-EEEEECCC--Cc--cc---cCCCceeeeEECcCCcEE
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGE---DGF-LISNTLSN--GL--DI---SEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~---Dg~-I~vwdl~~--~~--~~---~~~~~v~~~~~spdg~~l  626 (894)
                      +++|+....+ ....++-.+.|+|... .|+.|-+   |.. -|||-++.  ..  ++   ..++.+..--|.+||..+
T Consensus       175 l~tG~~~~v~-~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i  252 (386)
T PF14583_consen  175 LKTGERKVVF-EDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTI  252 (386)
T ss_dssp             TTT--EEEEE-EESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-E
T ss_pred             CCCCceeEEE-ecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEE
Confidence            8887765444 3556788999999544 5555543   221 36665443  22  11   234555566677777655

>KOG1275|consensus

Probab=98.10  E-value=3.5e-05  Score=88.89  Aligned_cols=104  Identities=13%  Similarity=0.085  Sum_probs=82.4

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE  565 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~  565 (894)
                      ++..++.|+....+..+|++..+..+..... ..|.-|  ...+++|++|...|.              |.+-|..+.+.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~im--R~Nnr~lf~G~t~G~--------------V~LrD~~s~~~  209 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIM--RYNNRNLFCGDTRGT--------------VFLRDPNSFET  209 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEE--EecCcEEEeecccce--------------EEeecCCcCce
Confidence            5667888888888999999998888776654 344444  445788999888886              88899999999


Q ss_pred             EEEccCCCCCeEEEEEecCCCEEEEEeC---------CCcEEEEECCCCccc
Q psy10063        566 FARIKGHFGPINSLAFHPDGKSYASGGE---------DGFLISNTLSNGLDI  608 (894)
Q Consensus       566 ~~~l~~h~~~V~~l~~spdg~~l~sgs~---------Dg~I~vwdl~~~~~~  608 (894)
                      ++.+..|.+.|..+..  .|..|++||.         |..|+|||++..+.+
T Consensus       210 iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral  259 (1118)
T KOG1275|consen  210 IHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRAL  259 (1118)
T ss_pred             eeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhcc
Confidence            9999999999887665  6888998875         556899999876644

>KOG3617|consensus

Probab=98.08  E-value=5.3e-05  Score=86.34  Aligned_cols=109  Identities=15%  Similarity=0.129  Sum_probs=81.5

Q ss_pred             EEEecCCCEEEEEE----CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        482 MQFSKDATMFITAS----KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       482 l~~spdg~~L~sgs----~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +.|+|...+|++++    ..|.|.|| +++|++-+.....-.+.+++|+|..-.|+.+-..|.              +.+
T Consensus        21 ~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~--------------~~v   85 (1416)
T KOG3617|consen   21 SSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGV--------------SDV   85 (1416)
T ss_pred             cccCCCCceeEEEEecCCCCceEEEE-ecCCCCCcccccceehhhhccChHHHHHhhccccce--------------eEE
Confidence            34566555555554    34778887 456665544444445678999998777777766664              777


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      |.....+.......|..+|..+.||++|..|+++..-|.|.+|+++..
T Consensus        86 ~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~  133 (1416)
T KOG3617|consen   86 QKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVI  133 (1416)
T ss_pred             EecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeec
Confidence            777766666666789999999999999999999999999999998743

>KOG1645|consensus

Probab=98.05  E-value=0.0003  Score=74.53  Aligned_cols=112  Identities=17%  Similarity=0.147  Sum_probs=78.9

Q ss_pred             ceEEEEEecCCC-EEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDAT-MFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|.+|+|+|..+ +|..++.+..|+|.|+++..++..+.....+++++|.-|...++.+|.....             |.
T Consensus       195 ~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~-------------Vl  261 (463)
T KOG1645|consen  195 FIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGM-------------VL  261 (463)
T ss_pred             hhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCce-------------EE
Confidence            799999999766 7888999999999999999999998888999999999998877776665543             88


Q ss_pred             EEeccccceE-EEccC--CCCCeEEEEEe------cCCCEEEEEeCCCcEEEEECCC
Q psy10063        557 FYHLIFEEEF-ARIKG--HFGPINSLAFH------PDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       557 vwd~~~~~~~-~~l~~--h~~~V~~l~~s------pdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +||++.-+-. ..+.+  -..+|..|+.-      +.|.+|+..+.  .+.+|.+..
T Consensus       262 vyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt--~l~f~ei~~  316 (463)
T KOG1645|consen  262 VYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALT--VLQFYEIVF  316 (463)
T ss_pred             EEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeeh--hhhhhhhhc
Confidence            8888754321 12211  22344444332      33445555443  356776654

>KOG3617|consensus

Probab=98.05  E-value=0.00013  Score=83.24  Aligned_cols=65  Identities=22%  Similarity=0.329  Sum_probs=55.3

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      .+.+++|+|..-.|+.|=.-|.+.||...+.+.......|.. +|..+.||++|..|+++..-|.+
T Consensus        61 hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a-~i~~l~wS~~G~~l~t~d~~g~v  125 (1416)
T KOG3617|consen   61 HATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPA-PIQGLDWSHDGTVLMTLDNPGSV  125 (1416)
T ss_pred             ehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCC-CceeEEecCCCCeEEEcCCCcee
Confidence            356799999988889998889999999887777777778888 99999999999999988765544

>KOG1275|consensus

Probab=98.00  E-value=6.4e-05  Score=86.80  Aligned_cols=152  Identities=13%  Similarity=0.173  Sum_probs=105.2

Q ss_pred             ccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC
Q psy10063        418 GNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD  497 (894)
Q Consensus       418 spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D  497 (894)
                      ...+++|++|...|.|.|-|..+-+.+++|..|.+ .|.++  +-.|..|+++|..+..               ..-..|
T Consensus       184 R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~-siSDf--Dv~GNlLitCG~S~R~---------------~~l~~D  245 (1118)
T KOG1275|consen  184 RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG-SISDF--DVQGNLLITCGYSMRR---------------YNLAMD  245 (1118)
T ss_pred             EecCcEEEeecccceEEeecCCcCceeeeeecccc-ceeee--eccCCeEEEeeccccc---------------cccccc
Confidence            34678999999999999999999999999999998 44332  2334444444432210               000147


Q ss_pred             CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC-CCEEEEEECCCCeEEEeccCccceeeEEEEe---cccc-ceEEEccCC
Q psy10063        498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPI-LPHVVLGGGQEAREVTTTSTKVGKFDARFYH---LIFE-EEFARIKGH  572 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd---~~~~-~~~~~l~~h  572 (894)
                      ..|+|||++..+.+.-+.......-+.|.|. ..++++++..|..              .+.|   +... ..+..+.--
T Consensus       246 ~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~--------------q~vd~~~lsNP~~~~~~v~p~  311 (1118)
T KOG1275|consen  246 PFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQF--------------QFVDTATLSNPPAGVKMVNPN  311 (1118)
T ss_pred             chhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccce--------------eeccccccCCCccceeEEccC
Confidence            7899999999888877766555566777775 3567777777763              3333   1111 111222223


Q ss_pred             CCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        573 FGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       573 ~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      ...+..+++++.|+.|+.|..+|.|.+|.
T Consensus       312 ~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  312 GSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             CCcceeEEecCCCceEEEecccCcEeeec
Confidence            44589999999999999999999999997

>KOG0882|consensus

Probab=97.98  E-value=2.3e-05  Score=83.67  Aligned_cols=205  Identities=11%  Similarity=-0.021  Sum_probs=139.5

Q ss_pred             ceeeeeccCccEEEecCCC----eEEEEEecCCCCEEEEEEccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCe
Q psy10063        381 DRLNSMSPAARKLATNAEP----VVKMQVTDQSAKITSLLWGNLDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPI  455 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~----~~~~~l~~H~~~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V  455 (894)
                      ......|-||..-.....+    .+...+..|-+.|.+++.+-||.++++++. |..++++|++.-..+..++...    
T Consensus        21 ~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~----   96 (558)
T KOG0882|consen   21 KFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVD----   96 (558)
T ss_pred             heEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhccccc----
Confidence            3344555566554444332    344467789999999999999999999877 9999999998665443332211    


Q ss_pred             eEEEEcCCCCEEEEEeCCCCccceEEEEEecC-C-CEEE-EEECCCCEEEEEcCCCc-EEEEEe--CCCCeeEEEEcCCC
Q psy10063        456 NDMQFSKDATMFITASHSQAVEPINDMQFSKD-A-TMFI-TASKDHTAKLFTTHDRQ-LLKTYT--TERPVNSAALSPIL  529 (894)
Q Consensus       456 ~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-g-~~L~-sgs~Dg~V~iwdl~~~~-~~~~~~--~~~~v~~l~~spdg  529 (894)
                           -|               ...++..++. . .+|+ +...+|.|.|+|-.... ....++  |-.+|.++.+.+.+
T Consensus        97 -----lP---------------g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~  156 (558)
T KOG0882|consen   97 -----LP---------------GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAG  156 (558)
T ss_pred             -----CC---------------CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccc
Confidence                 11               0111111221 1 1233 23456889999977544 333443  46899999999999


Q ss_pred             CEEEEEECCCCeEEEeccCccceee-EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        530 PHVVLGGGQEAREVTTTSTKVGKFD-ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       530 ~~l~~~~~~~~~~v~~~~~~~~~~~-v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      ..+++....|.+..|..+......+ -..|.++...-+..+........++.|+|+|..|..-+.|..|+++++.+++.+
T Consensus       157 Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklv  236 (558)
T KOG0882|consen  157 DSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLV  236 (558)
T ss_pred             cceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhh
Confidence            9999999999988888775222211 234666666666666666778899999999999999999999999999988755


Q ss_pred             c
Q psy10063        609 S  609 (894)
Q Consensus       609 ~  609 (894)
                      +
T Consensus       237 q  237 (558)
T KOG0882|consen  237 Q  237 (558)
T ss_pred             h
Confidence            3

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.97  E-value=0.011  Score=69.33  Aligned_cols=67  Identities=12%  Similarity=0.104  Sum_probs=46.7

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|.-+|+.+|+.+-+.........++ +.-.+.+++.++.||.|+.+|.++++.+.++++...+...|
T Consensus       442 ~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P  508 (527)
T TIGR03075       442 SLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPP  508 (527)
T ss_pred             eEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecC
Confidence            47888888888776554322222222 22355677778889999999999999999998876555443

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.95  E-value=0.0099  Score=69.27  Aligned_cols=165  Identities=15%  Similarity=0.103  Sum_probs=89.4

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeE--EEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE-----
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPIND--MQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA-----  494 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~--v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg-----  494 (894)
                      .+|+.++.++.|+-+|.++|+.+-++..... ....  +.-+|                    .+.  +.+++.+     
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~-~~~~~~i~ssP--------------------~v~--~~~v~vg~~~~~  167 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQ-VPPGYTMTGAP--------------------TIV--KKLVIIGSSGAE  167 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCC-cCcceEecCCC--------------------EEE--CCEEEEeccccc
Confidence            6788888899999999999998877764432 0000  00000                    011  1223333     


Q ss_pred             ----ECCCCEEEEEcCCCcEEEEEeCC-CC--------------------e-eEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        495 ----SKDHTAKLFTTHDRQLLKTYTTE-RP--------------------V-NSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       495 ----s~Dg~V~iwdl~~~~~~~~~~~~-~~--------------------v-~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                          +.+|.|..+|..+|+++..+... ..                    + ...++.+.+.+++++..++....|....
T Consensus       168 ~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~  247 (488)
T cd00216         168 FFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRR  247 (488)
T ss_pred             cccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCcc
Confidence                34678888899999888776542 10                    1 1345555667788887665211110000


Q ss_pred             ----ccceeeEEEEeccccceEEEccC--CCCC----eEEEEEe----cCCC---EEEEEeCCCcEEEEECCCCcccc
Q psy10063        549 ----KVGKFDARFYHLIFEEEFARIKG--HFGP----INSLAFH----PDGK---SYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       549 ----~~~~~~v~vwd~~~~~~~~~l~~--h~~~----V~~l~~s----pdg~---~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                          ....-.|.-+|+.+|+.+-.+..  |...    .....+.    -+|.   .++.++.+|.|..+|.++++.++
T Consensus       248 ~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W  325 (488)
T cd00216         248 TPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLIS  325 (488)
T ss_pred             CCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEee
Confidence                00001266677777777655431  2110    0001111    1333   56777788888888888876543

The alignment model contains an 8-bladed beta-propeller.

>KOG3621|consensus

Probab=97.93  E-value=0.00026  Score=80.22  Aligned_cols=130  Identities=11%  Similarity=0.120  Sum_probs=92.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----------  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----------  476 (894)
                      |...|.--+++..+++|+.|+.-|.|++|.-..++.++.-.+...+.+..+.++++..++|.|+..+.|           
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            445555566777889999999999999999876665433222222266777788888888888877766           


Q ss_pred             -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc-----EEEEEeCCCCeeEEEEcCCCCEEEEEECC
Q psy10063        477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ-----LLKTYTTERPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-----~~~~~~~~~~v~~l~~spdg~~l~~~~~~  538 (894)
                                   ..|++++|++++..|++|...|.|.+-.+....     ....+..+..|..|.+.  ..+|+++.-.
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LLVStl~  189 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLLVSTLT  189 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc--cceehHhhhh
Confidence                         489999999999999999999999988877621     11223345666666655  3455555544


Q ss_pred             C
Q psy10063        539 E  539 (894)
Q Consensus       539 ~  539 (894)
                      +
T Consensus       190 r  190 (726)
T KOG3621|consen  190 R  190 (726)
T ss_pred             h
Confidence            4

>KOG2114|consensus

Probab=97.90  E-value=0.00075  Score=78.04  Aligned_cols=176  Identities=15%  Similarity=0.177  Sum_probs=115.6

Q ss_pred             eeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCC-CEEEEecCCC-----cEEEEecCCC------eEE--EEecCC
Q psy10063        385 SMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLD-QYIITGHAKG-----DICTWDLRMG------REL--ESISGH  450 (894)
Q Consensus       385 ~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg-----~I~iWd~~tg------~~~--~~l~~h  450 (894)
                      .-+.+|+.+...+.-.+...++.|...|...-|.-++ .+|++.+.|+     .|+||+++.-      .++  ..+..+
T Consensus        40 igt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~  119 (933)
T KOG2114|consen   40 IGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTI  119 (933)
T ss_pred             EeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeecc
Confidence            3344444444444444444566677663333344444 5888877664     4999998643      333  222232


Q ss_pred             C----CCCeeEEEEcCCCCEEEEEeCCCCc----------------------cceEEEEEecCCCEEEEEECCCCEEEEE
Q psy10063        451 A----KEPINDMQFSKDATMFITASHSQAV----------------------EPINDMQFSKDATMFITASKDHTAKLFT  504 (894)
Q Consensus       451 ~----~~~V~~v~~spdg~~la~~~~d~~i----------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwd  504 (894)
                      .    ..++.+++++.+-+.+|+|-.+|.|                      .+|+.++|..+++.++.+.--..|.+|.
T Consensus       120 ~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~  199 (933)
T KOG2114|consen  120 KNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYS  199 (933)
T ss_pred             CCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEE
Confidence            2    2278999999999999999888877                      5899999999988755555567899999


Q ss_pred             cCCCcE-EEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-CCCCC
Q psy10063        505 THDRQL-LKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFGP  575 (894)
Q Consensus       505 l~~~~~-~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-~h~~~  575 (894)
                      +....+ +..+.. +..+.|..|++....|++++...               +.+|+....+.-..+. ||...
T Consensus       200 l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~---------------l~fY~sd~~~~cfaf~~g~kk~  258 (933)
T KOG2114|consen  200 LSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEF---------------LYFYDSDGRGPCFAFEVGEKKE  258 (933)
T ss_pred             ecCCCcceeeeccCCccceeeecCCCCccEEEecCce---------------EEEEcCCCcceeeeecCCCeEE
Confidence            984332 344554 57889999998766677777766               7788776555444554 55543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.84  E-value=0.00024  Score=79.52  Aligned_cols=78  Identities=13%  Similarity=0.181  Sum_probs=61.3

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      -..+...|.|++++|+.+.|+.|+.||.|++||...+..... + ..-                         ....++|
T Consensus       255 sipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k-a~~-------------------------~P~~iaW  307 (545)
T PF11768_consen  255 SIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K-AEF-------------------------IPTLIAW  307 (545)
T ss_pred             EEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e-ecc-------------------------cceEEEE
Confidence            335778999999999999999999999999999876633221 1 111                         4677888


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQ  509 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~  509 (894)
                      +|+|..|++|+..|.|++||+.-.-
T Consensus       308 Hp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  308 HPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             cCCCcEEEEEcCCceEEEEEeecCc
Confidence            8899999999999999999986443

>KOG2114|consensus

Probab=97.83  E-value=0.0018  Score=75.08  Aligned_cols=174  Identities=11%  Similarity=0.165  Sum_probs=117.2

Q ss_pred             EEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------
Q psy10063        416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------------------  476 (894)
Q Consensus       416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------  476 (894)
                      +|++.+..||.|+.||.|.+.+- +-+.++.|+.+..+-|..+....+..+|++.+.|+..                   
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP  108 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP  108 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence            46788889999999998888772 2444567777666224444444454667776666552                   


Q ss_pred             -----------------cceEEEEEecCCCEEEEEECCCCEEEEE--c-CCCcEEEEE--eCCCCeeEEEEcCCCCE-EE
Q psy10063        477 -----------------EPINDMQFSKDATMFITASKDHTAKLFT--T-HDRQLLKTY--TTERPVNSAALSPILPH-VV  533 (894)
Q Consensus       477 -----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwd--l-~~~~~~~~~--~~~~~v~~l~~spdg~~-l~  533 (894)
                                       .++.+++.+.+-+.+|+|-.+|.|.++.  + ++......+  .+.++|+.++|-.+++. |+
T Consensus       109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF  188 (933)
T KOG2114|consen  109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF  188 (933)
T ss_pred             ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence                             3677888888888899999999998884  2 222122223  34689999999999988 44


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccc-eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ++....               |.+|.+.... .+..+..|...+.|..|++....|++++ +..|.+|+.+..+
T Consensus       189 v~Tt~~---------------V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~  246 (933)
T KOG2114|consen  189 VATTEQ---------------VMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRG  246 (933)
T ss_pred             EEecce---------------eEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcc
Confidence            444443               6777777333 2444677888899999886554355544 3569999887543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.82  E-value=0.0021  Score=72.09  Aligned_cols=70  Identities=16%  Similarity=0.061  Sum_probs=57.6

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                      ..|.|++++|+.++|+.|+.||.|.+||...+.... .+..-.+..++|+|+|..|++|+..|.+.+|+..
T Consensus       260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~-~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL-AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             CcceEEecCcccceEEEEecCCeEEEEEcCCCeeee-eeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            478999999999999999999999999987764332 3455667899999999999999999985554443

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.76  E-value=0.0017  Score=73.66  Aligned_cols=128  Identities=10%  Similarity=0.093  Sum_probs=75.4

Q ss_pred             CeeEEEEcCCCCEEEEEeCCCCc------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCee
Q psy10063        454 PINDMQFSKDATMFITASHSQAV------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVN  521 (894)
Q Consensus       454 ~V~~v~~spdg~~la~~~~d~~i------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~  521 (894)
                      ....+.++|.|+++++++....+            +.-..++|...++ +|+-...+.|+|+.--+.+..+.+.....+.
T Consensus        34 ~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~k~i~~~~~~~  112 (443)
T PF04053_consen   34 YPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKAFGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVVKSIKLPFSVE  112 (443)
T ss_dssp             --SEEEE-TTSSEEEEEETTEEEEEETTTTEEEEEEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT-----SS-EE
T ss_pred             CCeeEEECCCCCEEEEEcCCEEEEEEccCCcccccCceeEEEEecCcc-EEEEECCCeEEEEEcCccccceEEcCCcccc
Confidence            67889999999999987655433            4556677888544 6666667889987433333333444433344


Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      .|..   |..|++.+.+.               |.+||+++++.++++...  .|..+.|+++|.+++..+.+ .+.|++
T Consensus       113 ~If~---G~LL~~~~~~~---------------i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~  171 (443)
T PF04053_consen  113 KIFG---GNLLGVKSSDF---------------ICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILK  171 (443)
T ss_dssp             EEE----SSSEEEEETTE---------------EEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred             eEEc---CcEEEEECCCC---------------EEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence            4443   78777777663               899999999999988643  48999999999999988765 677776


Q ss_pred             CC
Q psy10063        602 LS  603 (894)
Q Consensus       602 l~  603 (894)
                      .+
T Consensus       172 ~~  173 (443)
T PF04053_consen  172 YN  173 (443)
T ss_dssp             E-
T ss_pred             ec
Confidence            54

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.75  E-value=0.0021  Score=75.72  Aligned_cols=164  Identities=12%  Similarity=0.016  Sum_probs=95.1

Q ss_pred             CCCCEEEEEEccCCCEEEEec------CCC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        408 QSAKITSLLWGNLDQYIITGH------AKG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs------~Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ....|.++++||||++++...      .|+  .|.+++.. +.. +.+... . ....-.|+|||+.|++......    
T Consensus       348 ~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~g-~-~~t~PsWspDG~~lw~v~dg~~----  419 (591)
T PRK13616        348 QMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLEG-H-SLTRPSWSLDADAVWVVVDGNT----  419 (591)
T ss_pred             cccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeecC-C-CCCCceECCCCCceEEEecCcc----
Confidence            335788999999999887664      243  45555542 333 333221 2 4678889999887776643211    


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                        +.|      +......+.|.+.++..++..+  ..++.|..+.|||||++|++... +.+.+           ..|-.
T Consensus       420 --~~~------v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~~-g~v~V-----------a~Vvr  477 (591)
T PRK13616        420 --VVR------VIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMIIG-GKVYL-----------AVVEQ  477 (591)
T ss_pred             --eEE------EeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEEC-CEEEE-----------EEEEe
Confidence              111      1111234566666777666554  44567999999999999998774 44333           11222


Q ss_pred             ccccc-eE---EEc-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        560 LIFEE-EF---ARI-KGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       560 ~~~~~-~~---~~l-~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      ...|+ .+   +.+ .+-...+.++.|..++.++ .+..++...+|.+
T Consensus       478 ~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        478 TEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             CCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence            22332 01   112 2233346889999998854 5555554445543

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.73  E-value=0.14  Score=62.23  Aligned_cols=173  Identities=11%  Similarity=0.075  Sum_probs=100.6

Q ss_pred             CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCee-EEEE--cCCCCEEEEEeCCCCccceEEEEEec--CCCEEEEEE
Q psy10063        421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPIN-DMQF--SKDATMFITASHSQAVEPINDMQFSK--DATMFITAS  495 (894)
Q Consensus       421 g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~-~v~~--spdg~~la~~~~d~~i~~V~~l~~sp--dg~~L~sgs  495 (894)
                      +++|+.++.|+.|.-.|.++|+.+..|....  .|. ...+  .+.+.+              .+.-.|  .+..|+.|+
T Consensus       260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G--~vdl~~~~g~~~~g~~--------------~~ts~P~V~~g~VIvG~  323 (764)
T TIGR03074       260 ARRIILPTSDARLIALDADTGKLCEDFGNNG--TVDLTAGMGTTPPGYY--------------YPTSPPLVAGTTVVIGG  323 (764)
T ss_pred             CCEEEEecCCCeEEEEECCCCCEEEEecCCC--ceeeecccCcCCCccc--------------ccccCCEEECCEEEEEe
Confidence            4588889999999999999999988775322  110 0000  011110              001111  123444443


Q ss_pred             ----------CCCCEEEEEcCCCcEEEEEeCC----------CC--------e-eEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        496 ----------KDHTAKLFTTHDRQLLKTYTTE----------RP--------V-NSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       496 ----------~Dg~V~iwdl~~~~~~~~~~~~----------~~--------v-~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                                .+|.|+-+|+++|+++-.+...          +.        + ..+++.++...+++..+......|..
T Consensus       324 ~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~  403 (764)
T TIGR03074       324 RVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGG  403 (764)
T ss_pred             cccccccccCCCcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCC
Confidence                      2688999999999998877531          01        1 34566666667777655443322222


Q ss_pred             cCc----cceeeEEEEeccccceEEEccCCCCCeEE---------EEEec-CCC---EEEEEeCCCcEEEEECCCCcccc
Q psy10063        547 STK----VGKFDARFYHLIFEEEFARIKGHFGPINS---------LAFHP-DGK---SYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       547 ~~~----~~~~~v~vwd~~~~~~~~~l~~h~~~V~~---------l~~sp-dg~---~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                      ...    ...-.|.-.|+++|+.+-.++...+.+++         +.+.. +|+   .|+.+..+|.++++|.++++.+.
T Consensus       404 ~r~~~~n~y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~  483 (764)
T TIGR03074       404 DRTPADEKYSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIV  483 (764)
T ss_pred             ccccCcccccceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEe
Confidence            111    11123677888889887666542222222         12222 553   78899999999999999988664

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.72  E-value=0.0086  Score=68.45  Aligned_cols=127  Identities=9%  Similarity=0.013  Sum_probs=69.6

Q ss_pred             CEEEEEEccCCCEEEEe-cC----CCcEEEEecCCCeEEEEe-cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        411 KITSLLWGNLDQYIITG-HA----KGDICTWDLRMGRELESI-SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sg-s~----Dg~I~iWd~~tg~~~~~l-~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      .+..+++||||++||.+ +.    ...|+|+|+++|+.+... .....   ..+.|.+|++.|+....+..-.       
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~---~~~~W~~d~~~~~y~~~~~~~~-------  194 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF---SSVSWSDDGKGFFYTRFDEDQR-------  194 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES---EEEEECTTSSEEEEEECSTTTS-------
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc---ceEEEeCCCCEEEEEEeCcccc-------
Confidence            34467899999988865 22    245999999999876532 22111   1244444444333332221100       


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeC--CCC-eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQL--LKTYTT--ERP-VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~--~~~-v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                         +.   .......|++|.+.+...  ...++.  ... ...+.+++|+++|++....+.-          ..++.+.+
T Consensus       195 ---~~---~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~----------~s~v~~~d  258 (414)
T PF02897_consen  195 ---TS---DSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS----------ESEVYLLD  258 (414)
T ss_dssp             ---S----CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS----------EEEEEEEE
T ss_pred             ---cc---cCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc----------CCeEEEEe
Confidence               00   111133478888876543  244443  233 6788999999999887766542          12366666


Q ss_pred             cccc
Q psy10063        560 LIFE  563 (894)
Q Consensus       560 ~~~~  563 (894)
                      +..+
T Consensus       259 ~~~~  262 (414)
T PF02897_consen  259 LDDG  262 (414)
T ss_dssp             CCCT
T ss_pred             cccc
Confidence            6653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.68  E-value=0.0045  Score=70.23  Aligned_cols=165  Identities=14%  Similarity=0.099  Sum_probs=85.7

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------c
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--------E  477 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------~  477 (894)
                      ....-....|.++|.|++++.+ .||...|+.....+....  +    .-..++|...++ +|+......+        .
T Consensus        29 g~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~~--G----~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~  100 (443)
T PF04053_consen   29 GSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKAF--G----SGLSFVWSSRNR-YAVLESSSTIKIYKNFKNE  100 (443)
T ss_dssp             EE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEEE--E----E-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-
T ss_pred             CCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCccccc--C----ceeEEEEecCcc-EEEEECCCeEEEEEcCccc
Confidence            3344557788888888887775 466777777444443332  1    123466666444 3333323322        0


Q ss_pred             ---------ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        478 ---------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       478 ---------~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                               .+..|-  . |.+|+..+.+ .|.+||+.+++.++.+.... |..+.|+++|.+++..+.+.. .      
T Consensus       101 ~~k~i~~~~~~~~If--~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~~i-~------  168 (443)
T PF04053_consen  101 VVKSIKLPFSVEKIF--G-GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKDSI-Y------  168 (443)
T ss_dssp             TT-----SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S-SE-E------
T ss_pred             cceEEcCCcccceEE--c-CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCCeE-E------
Confidence                     112221  1 7777776654 79999999999999998764 899999999999999987762 2      


Q ss_pred             ccceeeEEEEecc-------cc--ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy10063        549 KVGKFDARFYHLI-------FE--EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLIS  599 (894)
Q Consensus       549 ~~~~~~v~vwd~~-------~~--~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~v  599 (894)
                            |.-++.+       .|  ..+..+......|.+.+|..|  .|+..... +|+.
T Consensus       169 ------il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY  219 (443)
T PF04053_consen  169 ------ILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY  219 (443)
T ss_dssp             ------EEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE
T ss_pred             ------EEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE
Confidence                  2223333       01  122223222567889999766  44444444 6666

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.67  E-value=0.0039  Score=63.61  Aligned_cols=205  Identities=15%  Similarity=0.127  Sum_probs=122.0

Q ss_pred             EEEccCCCEEEEecCC-----CcEEEEecCCC-eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-
Q psy10063        415 LLWGNLDQYIITGHAK-----GDICTWDLRMG-RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-  487 (894)
Q Consensus       415 l~~spdg~~L~sgs~D-----g~I~iWd~~tg-~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-  487 (894)
                      =+||+||++|+..-.|     |.|-|||...+ +.+.++..|.- ....|.|.+||+.|+.+...        |.-+|+ 
T Consensus       119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~Gi-GpHev~lm~DGrtlvvanGG--------Iethpdf  189 (366)
T COG3490         119 GVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGI-GPHEVTLMADGRTLVVANGG--------IETHPDF  189 (366)
T ss_pred             cccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCc-CcceeEEecCCcEEEEeCCc--------eeccccc
Confidence            3699999999886444     78999998754 44677777766 67788888899888776531        222332 


Q ss_pred             C-CEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        488 A-TMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       488 g-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      | ..|=.-++.-.+.+.|..+|.++.....     +-.+..++..+||..++.+-..|...-         +-..+--..
T Consensus       190 gR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d---------~ppLvg~~~  260 (366)
T COG3490         190 GRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRND---------LPPLVGHFR  260 (366)
T ss_pred             CccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCcc---------CCcceeecc
Confidence            1 1233334556677778788887765543     356888899999887766554443100         001111112


Q ss_pred             ccceEEEcc-------CCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccccCCCc--eeeeEECcCCcEEEecCC
Q psy10063        562 FEEEFARIK-------GHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDISEGSF--TSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       562 ~~~~~~~l~-------~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~--v~~~~~spdg~~l~~~~g  631 (894)
                      .++.+..+.       .....|-+|+...+..+++..+ ......+||.+++..+.+...  ...++....|..+.+..|
T Consensus       261 ~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~daaGva~~~~gf~vssg~G  340 (366)
T COG3490         261 KGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPDAAGVAAAKGGFAVSSGQG  340 (366)
T ss_pred             CCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccccccceeccCceEEecCCc
Confidence            233333322       2234577788876656555544 455688999999875543322  223344444555555555


Q ss_pred             eEEEEe
Q psy10063        632 HIHSLS  637 (894)
Q Consensus       632 ~i~~~~  637 (894)
                      ++....
T Consensus       341 ~~~~~s  346 (366)
T COG3490         341 RIIFYS  346 (366)
T ss_pred             eEEecc
Confidence            555443

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.66  E-value=0.027  Score=63.89  Aligned_cols=80  Identities=13%  Similarity=0.090  Sum_probs=51.5

Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      .++.+|.|.-||+...+..+...   .......|++|+.. |+.+..+....+.|.++.|..+ ..|+....||.+++||
T Consensus        33 ~va~a~~gGpIAi~~d~~k~~~~---~~~~p~~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~  107 (410)
T PF04841_consen   33 IVAVAPYGGPIAIIRDESKLVPV---GSAKPNSIQIYSSS-GKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYD  107 (410)
T ss_pred             eEEEcCCCceEEEEecCcccccc---cCCCCcEEEEECCC-CCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEe
Confidence            35566666666666554221111   00011138888876 6677776655589999999875 4566777999999999


Q ss_pred             CCCCc
Q psy10063        602 LSNGL  606 (894)
Q Consensus       602 l~~~~  606 (894)
                      +....
T Consensus       108 ~~G~~  112 (410)
T PF04841_consen  108 LFGEF  112 (410)
T ss_pred             CCCce
Confidence            86443

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.62  E-value=0.00033  Score=71.52  Aligned_cols=117  Identities=12%  Similarity=0.018  Sum_probs=75.2

Q ss_pred             cCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec---c--------ccCCCceEeecCCCeEEEEecCCCCce
Q psy10063        757 AGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG---F--------LLSCPDFLFDFDTTREVTTTSTKVGKF  825 (894)
Q Consensus       757 ~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~---~--------~~~~~~~~fS~dg~~l~~as~d~~g~~  825 (894)
                      ..|.-.|.+|.|..|.+.++++ .|-.|-+|.+........   +        ..-+.+..|+|.--.+..-+..+.   
T Consensus       169 NaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG---  244 (460)
T COG5170         169 NAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG---  244 (460)
T ss_pred             ccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC---
Confidence            4577778899999998888775 566699998654332111   1        112334557776554444443332   


Q ss_pred             eEEEeecCCccee------ee----------ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        826 DARFYHLIFEEEF------AR----------IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       826 ~I~vwd~~tg~~l------~~----------l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      .|+|-|++...+.      ..          +.+-...|.++.|++.|+|+++-+. -+|+|||+....
T Consensus       245 ~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k  312 (460)
T COG5170         245 EIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAK  312 (460)
T ss_pred             cEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccccc
Confidence            6999998743221      11          1223357889999999999998765 469999987543

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.62  E-value=0.017  Score=59.15  Aligned_cols=117  Identities=18%  Similarity=0.194  Sum_probs=76.4

Q ss_pred             CCcEEEEEeCCCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC--CeEEEEEec
Q psy10063        507 DRQLLKTYTTERPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG--PINSLAFHP  583 (894)
Q Consensus       507 ~~~~~~~~~~~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~--~V~~l~~sp  583 (894)
                      .|+++..+....+...|+|+|.-.+ ++++-.-|..             ..++|....+++..+....+  ..-.-+||+
T Consensus        57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf-------------~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~  123 (366)
T COG3490          57 AGKIVFATALPARGHGIAFHPALPRAVAFARRPGTF-------------AMVFDPNGAQEPVTLVSQEGRHFYGHGVFSP  123 (366)
T ss_pred             CCceeeeeecccccCCeecCCCCcceEEEEecCCce-------------EEEECCCCCcCcEEEecccCceeecccccCC
Confidence            4677777766677778889987554 4555555543             66788877776665543222  122347999


Q ss_pred             CCCEEEEEeCC-----CcEEEEECCCCccc-----cCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        584 DGKSYASGGED-----GFLISNTLSNGLDI-----SEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       584 dg~~l~sgs~D-----g~I~vwdl~~~~~~-----~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      ||++|+..-.|     |.|-|||.+.+...     ..+--...+.+.+||..++...|-|..-
T Consensus       124 dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIeth  186 (366)
T COG3490         124 DGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETH  186 (366)
T ss_pred             CCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecc
Confidence            99999876543     77999999854321     1244455678888888887777655443

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.58  E-value=0.15  Score=57.29  Aligned_cols=113  Identities=14%  Similarity=0.106  Sum_probs=82.8

Q ss_pred             eEEEEEecCCCEEE-EEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCC-CeEEEeccCccceeeEE
Q psy10063        479 INDMQFSKDATMFI-TASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQE-AREVTTTSTKVGKFDAR  556 (894)
Q Consensus       479 V~~l~~spdg~~L~-sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~-~~~v~~~~~~~~~~~v~  556 (894)
                      -..+++++++..++ ....+..|.+.|....++++.+........++|+++++.++++.... ..            .+.
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~------------~vs  143 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNN------------TVS  143 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCc------------eEE
Confidence            44667777777444 44456889999988888888887777889999999999999988742 11            167


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSN  604 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~  604 (894)
                      +.|..+.+.+.....-..+ ..++++|+|..++.+. .++.|.+.+.+.
T Consensus       144 vid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~  191 (381)
T COG3391         144 VIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSG  191 (381)
T ss_pred             EEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCC
Confidence            7777777777765433334 8899999999766665 677888887543

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.53  E-value=0.024  Score=63.53  Aligned_cols=135  Identities=8%  Similarity=0.076  Sum_probs=77.1

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE--EecCC-------------CCCCeeEEEE--cCC--CCEEEEEe
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE--SISGH-------------AKEPINDMQF--SKD--ATMFITAS  471 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~--~l~~h-------------~~~~V~~v~~--spd--g~~la~~~  471 (894)
                      .|.++.|+++-.-|++|-..|.|.||.+...+...  ....+             .+ .+..+.-  .+.  ..++-..-
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~di~~r~~~~~~~gf~P~~l   81 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPG-KLTDISDRAPPSLKEGFLPLTL   81 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS--SEEE-GGG--TT-SEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCc-ceEEehhhCCcccccccCchhh
Confidence            58899999998899999999999999875433221  00000             11 2222211  011  01111111


Q ss_pred             CCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC---------CCCeeEEEEcC-----CC---CEEEE
Q psy10063        472 HSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT---------ERPVNSAALSP-----IL---PHVVL  534 (894)
Q Consensus       472 ~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---------~~~v~~l~~sp-----dg---~~l~~  534 (894)
                      .+...+.|.+++.| |=.+++.|..+|.|.|.|+|...++..-..         ...+.++.|+-     |+   -+|++
T Consensus        82 ~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v  160 (395)
T PF08596_consen   82 LDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV  160 (395)
T ss_dssp             E---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred             eeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence            12223589999997 455899999999999999998888766331         23577887762     22   46777


Q ss_pred             EECCCCeEEEecc
Q psy10063        535 GGGQEAREVTTTS  547 (894)
Q Consensus       535 ~~~~~~~~v~~~~  547 (894)
                      |...|.+.+|.+-
T Consensus       161 GTn~G~v~~fkIl  173 (395)
T PF08596_consen  161 GTNSGNVLTFKIL  173 (395)
T ss_dssp             EETTSEEEEEEEE
T ss_pred             EeCCCCEEEEEEe
Confidence            7888776665443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG1897|consensus

Probab=97.50  E-value=0.42  Score=57.12  Aligned_cols=402  Identities=12%  Similarity=0.066  Sum_probs=190.8

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCC--C----CEEEEEeCCCCc--------
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKD--A----TMFITASHSQAV--------  476 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spd--g----~~la~~~~d~~i--------  476 (894)
                      .+...+.+-+...++.++.++.+...++..+......+..-...|.|+.++|-  +    +++++|..+..+        
T Consensus       489 ~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd  568 (1096)
T KOG1897|consen  489 KITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPD  568 (1096)
T ss_pred             ceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCC
Confidence            34444444444567777777778888887766322222112237999999974  2    256666655433        


Q ss_pred             ---------------cceEEEEEecCCCEEEEEECCCCEEEE--EcCCCcEEEEE---eCCCCeeEEEEcCCCCEEEEEE
Q psy10063        477 ---------------EPINDMQFSKDATMFITASKDHTAKLF--TTHDRQLLKTY---TTERPVNSAALSPILPHVVLGG  536 (894)
Q Consensus       477 ---------------~~V~~l~~spdg~~L~sgs~Dg~V~iw--dl~~~~~~~~~---~~~~~v~~l~~spdg~~l~~~~  536 (894)
                                     +.|.-.+|-.|..+|+++..||.+..|  |..+|+....-   -+-.++.--.|+..++.-+.+.
T Consensus       569 ~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~  648 (1096)
T KOG1897|consen  569 LILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFAL  648 (1096)
T ss_pred             cceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEe
Confidence                           455566666678899999999998766  44455443222   2345666667777776666666


Q ss_pred             CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEE-EEEecC--CCEEEEEeCCCcEEEEECCCCccc-----
Q psy10063        537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS-LAFHPD--GKSYASGGEDGFLISNTLSNGLDI-----  608 (894)
Q Consensus       537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~-l~~spd--g~~l~sgs~Dg~I~vwdl~~~~~~-----  608 (894)
                      .|+-..+|...               ++.+..--. -..+.. +.|+.+  ...|+++.. +.+++.-++.-+++     
T Consensus       649 sdrP~viY~~n---------------~kLv~spls-~kev~~~c~f~s~a~~d~l~~~~~-~~l~i~tid~iqkl~irtv  711 (1096)
T KOG1897|consen  649 SDRPTVIYSSN---------------GKLVYSPLS-LKEVNHMCPFNSDAYPDSLASANG-GALTIGTIDEIQKLHIRTV  711 (1096)
T ss_pred             CCCCEEEEecC---------------CcEEEeccc-hHHhhhhcccccccCCceEEEecC-CceEEEEecchhhcceeee
Confidence            66653333222               222211000 001111 122221  234555543 56777776654433     


Q ss_pred             cCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeec
Q psy10063        609 SEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNP  688 (894)
Q Consensus       609 ~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~  688 (894)
                      ..+..++.+++.+....+.....+.....        .   ..+....-..+++.+....             ..++...
T Consensus       712 pl~~~prrI~~q~~sl~~~v~s~r~e~~~--------~---~~~ee~~~s~l~vlD~nTf-------------~vl~~he  767 (1096)
T KOG1897|consen  712 PLGESPRRICYQESSLTFGVLSNRIESSA--------E---YYGEEYEVSFLRVLDQNTF-------------EVLSSHE  767 (1096)
T ss_pred             cCCCChhheEecccceEEEEEecccccch--------h---hcCCcceEEEEEEecCCce-------------eEEeecc
Confidence            34555666666664433321111100000        0   0000000111111111100             0111111


Q ss_pred             cCCcceeEeccCcceeEEeeeEEEcCC-CCEEEecccC---ccccccCCcceeeccccCcccccCCCCcceecCC--CCc
Q psy10063        689 FDEQQSVELTKDEQIEMARNRMSINHS-GTRLHVNPFD---EQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGP--VDI  762 (894)
Q Consensus       689 ~~~~~~~~~s~~~~~~~~~~~~~~s~~-g~~l~v~~~~---~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h--~~~  762 (894)
                      +...         +...+.....+..| +..++++..-   .........+.++...+       +..++++..+  .+.
T Consensus       768 f~~~---------E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e-------~~~L~~v~e~~v~Ga  831 (1096)
T KOG1897|consen  768 FERN---------ETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEE-------LNSLELVAETVVKGA  831 (1096)
T ss_pred             cccc---------ceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEec-------CCceeeeeeeeeccc
Confidence            1110         01111111223223 3333332211   00001111122221111       1222233222  233


Q ss_pred             eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063        763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA  839 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~  839 (894)
                      ++++.. -.|++||.  -...|++|++.+.+.++.   +..+...+.+.-.|.++++|.--+  .+++..|+-..|....
T Consensus       832 v~aL~~-fngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~--Sitll~y~~~eg~f~e  906 (1096)
T KOG1897|consen  832 VYALVE-FNGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMR--SITLLQYKGDEGNFEE  906 (1096)
T ss_pred             eeehhh-hCCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccc--eEEEEEEeccCCceEE
Confidence            444433 24566653  445799999888765543   233344555677788888765544  4566777777766554


Q ss_pred             ecc-CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        840 RIK-GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       840 ~l~-gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      .-+ .|..++.++.+-.+..||. +..+|.+++-..+
T Consensus       907 vArD~~p~Wmtaveil~~d~ylg-ae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  907 VARDYNPNWMTAVEILDDDTYLG-AENSGNLFTVRKD  942 (1096)
T ss_pred             eehhhCccceeeEEEecCceEEe-ecccccEEEEEec
Confidence            433 5778888888887666544 4466766665554

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.44  E-value=0.042  Score=62.28  Aligned_cols=27  Identities=22%  Similarity=0.150  Sum_probs=23.0

Q ss_pred             CCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        517 ERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       517 ~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                      .+++..|++||+|++|+.-..+|.+.+
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v  242 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWV  242 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEE
Confidence            468999999999999999998887444

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.44  E-value=0.0086  Score=53.13  Aligned_cols=98  Identities=17%  Similarity=0.189  Sum_probs=66.7

Q ss_pred             EEEEEEcc---CC-CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        412 ITSLLWGN---LD-QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       412 V~~l~~sp---dg-~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      |.+|++..   || ..|+.|+.|..||||+-  .+.+.++.....                          |.+|+-...
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~--------------------------v~~L~~~~~   53 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITETDK--------------------------VTSLCSLGG   53 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecccc--------------------------eEEEEEcCC
Confidence            67777765   33 38999999999999983  467777776653                          555555544


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCC----CEEEEEECCCC
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL----PHVVLGGGQEA  540 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg----~~l~~~~~~~~  540 (894)
                       .+|+.+...|+|-+|+-  .+.+..++.+..+.++++..-.    ..|++|-.+|.
T Consensus        54 -~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGk  107 (111)
T PF14783_consen   54 -GRFAYALANGTVGVYDR--SQRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGK  107 (111)
T ss_pred             -CEEEEEecCCEEEEEeC--cceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCe
Confidence             56888888899988864  3444455555567776655432    25777766665

>KOG1832|consensus

Probab=97.37  E-value=0.00024  Score=81.65  Aligned_cols=117  Identities=12%  Similarity=-0.000  Sum_probs=68.5

Q ss_pred             CCCceEEEeeCCCCCEEEEecCCC--cEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc
Q psy10063        759 PVDIGFKMPEPPKREKLALALADK--VSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE  836 (894)
Q Consensus       759 h~~~v~~la~spdg~~Latgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~  836 (894)
                      |...|.-+.-+.||..+++.+.-.  -..+|++...........+...+.|+-.-+.-+++....    .+.|||++++.
T Consensus      1142 H~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d----~a~~YDvqT~~ 1217 (1516)
T KOG1832|consen 1142 HQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEAD----DALLYDVQTCS 1217 (1516)
T ss_pred             cccccccccccCCcceeeeeccccCchHHHhccccccCccccccccceeehhhhHHHHHhccccc----ceEEEecccCc
Confidence            333444444445555544332222  356777655332222334455566776655545444433    47899999987


Q ss_pred             eeeec-c---CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        837 EFARI-K---GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       837 ~l~~l-~---gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .+..+ .   +....=.+..|+|+..+++=   ||  .+||+...+.+++|+
T Consensus      1218 ~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~~aIh~FD 1264 (1516)
T KOG1832|consen 1218 PLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG--VLWDVRIPEAIHRFD 1264 (1516)
T ss_pred             HHHHhcCcchhhhhhccccccCCCcceEee---Cc--eeeeeccHHHHhhhh
Confidence            76553 2   22333467889999987763   45  589999888888875

>smart00320 WD40 WD40 repeats

Probab=97.36  E-value=0.00034  Score=48.59  Aligned_cols=38  Identities=47%  Similarity=0.843  Sum_probs=34.0

Q ss_pred             ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        836 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       836 ~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      +++..+.+|...|.+++|.+++.+|++++.|+.|++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            45566778999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.34  E-value=0.031  Score=58.20  Aligned_cols=182  Identities=11%  Similarity=0.202  Sum_probs=90.1

Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCC-CCc------------------cceEEEEEecCCCEEEEEECCCCEEEEEcC
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHS-QAV------------------EPINDMQFSKDATMFITASKDHTAKLFTTH  506 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d-~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~  506 (894)
                      .+.+-.. .+..|.|.|+...|++.... +.+                  +..-.|++..++.++++.-.++.|.++++.
T Consensus        16 ~l~g~~~-e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   16 PLPGILD-ELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             E-TT--S--EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             ECCCccC-CccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            3444444 57777777765544444332 222                  356677777777666665568899999884


Q ss_pred             CCc------EEEEEe------CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC
Q psy10063        507 DRQ------LLKTYT------TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  574 (894)
Q Consensus       507 ~~~------~~~~~~------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~  574 (894)
                      ...      ....+.      +...+..|+|++.+..|+++-...-..++.+........+.+.+......   ...+..
T Consensus        95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  171 (248)
T PF06977_consen   95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDD---DKLFVR  171 (248)
T ss_dssp             ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH----HT--SS
T ss_pred             ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccccc---ccceec
Confidence            321      112232      12468999999999999988777665555554422222233322211110   123445


Q ss_pred             CeEEEEEecCCC-EEEEEeCCCcEEEEECCCCc----cc--------cCCCceeeeEECcCCcEEEecCC
Q psy10063        575 PINSLAFHPDGK-SYASGGEDGFLISNTLSNGL----DI--------SEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       575 ~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~----~~--------~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      .+.+++++|... +++.......|.++|.+...    .+        ....+...++|.++|.++.....
T Consensus       172 d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEp  241 (248)
T PF06977_consen  172 DLSGLSYDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEP  241 (248)
T ss_dssp             ---EEEEETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETT
T ss_pred             cccceEEcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCC
Confidence            678899998644 45555566667777744331    01        11245667888888877654443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG4640|consensus

Probab=97.29  E-value=0.001  Score=74.70  Aligned_cols=93  Identities=17%  Similarity=0.270  Sum_probs=78.8

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE-EEEEecC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN-DMQFSKD  487 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~-~l~~spd  487 (894)
                      ...|.-+.|+|.-.+||.+..+|.|.|..+. .+.+..+.-+..                         .+. +++|.||
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~-------------------------~v~~sL~W~~D   73 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGE-------------------------NVTASLCWRPD   73 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCC-------------------------ccceeeeecCC
Confidence            3567888999999999999999999999988 666777775554                         455 9999999


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEE--EeCCCCeeEEEEcC
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKT--YTTERPVNSAALSP  527 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~--~~~~~~v~~l~~sp  527 (894)
                      |++||.|-.||+|+|.|++++..+..  +....+|.++-|++
T Consensus        74 GkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   74 GKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             CCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence            99999999999999999999998887  45567888888874

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.28  E-value=0.061  Score=61.44  Aligned_cols=123  Identities=12%  Similarity=0.000  Sum_probs=71.9

Q ss_pred             eEEEEEecCCCEEEEE-ECC----CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        479 INDMQFSKDATMFITA-SKD----HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       479 V~~l~~spdg~~L~sg-s~D----g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      +..++++|||++||.+ +..    ..|+|+|+++|+.+...-.......++|.+|++.|+....+.....-   ......
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~---~~~~~~  202 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTS---DSGYPR  202 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS----CCGCCE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccc---cCCCCc
Confidence            3456677777776654 333    34999999999877543222222349999999998888766531100   111234


Q ss_pred             eEEEEeccccceE--EEccCCCC--CeEEEEEecCCCEEEEEeCCC----cEEEEECCC
Q psy10063        554 DARFYHLIFEEEF--ARIKGHFG--PINSLAFHPDGKSYASGGEDG----FLISNTLSN  604 (894)
Q Consensus       554 ~v~vwd~~~~~~~--~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg----~I~vwdl~~  604 (894)
                      .|++|.+.+....  ..+.....  ....+.+++|+++|+..+..+    .|++.++..
T Consensus       203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~  261 (414)
T PF02897_consen  203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD  261 (414)
T ss_dssp             EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred             EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence            5778887665432  33333333  256888999999877544322    356666654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.25  E-value=0.023  Score=63.62  Aligned_cols=188  Identities=14%  Similarity=0.144  Sum_probs=93.8

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec--C-----CCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS--G-----HAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~--~-----h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      .+....+.|++|+.|. =.++|.|..+|.|.|.|++....+..-.  .     .....|.++.|+-              
T Consensus        81 l~~~~~g~vtal~~S~-iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~v--------------  145 (395)
T PF08596_consen   81 LLDAKQGPVTALKNSD-IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSV--------------  145 (395)
T ss_dssp             EE---S-SEEEEEE-B-TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEE--------------
T ss_pred             heeccCCcEeEEecCC-CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEE--------------
Confidence            3445589999999984 4599999999999999998777765521  2     1122444554431              


Q ss_pred             cceEEEEEecCC---CEEEEEECCCCEEEEEcC--C-CcEE----EEE-eCCCCeeEEE-EcCCC---------------
Q psy10063        477 EPINDMQFSKDA---TMFITASKDHTAKLFTTH--D-RQLL----KTY-TTERPVNSAA-LSPIL---------------  529 (894)
Q Consensus       477 ~~V~~l~~spdg---~~L~sgs~Dg~V~iwdl~--~-~~~~----~~~-~~~~~v~~l~-~spdg---------------  529 (894)
                           +.+..|+   -+|++|...|.+.+|.+.  . +...    ... .++++|..|. |..+.               
T Consensus       146 -----m~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~  220 (395)
T PF08596_consen  146 -----MTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLS  220 (395)
T ss_dssp             -----EE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGG
T ss_pred             -----EecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccc
Confidence                 1111122   356677777777777653  1 2111    111 2345555444 32221               


Q ss_pred             ------CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe-----cCCCEEEEEeCCCcEE
Q psy10063        530 ------PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH-----PDGKSYASGGEDGFLI  598 (894)
Q Consensus       530 ------~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s-----pdg~~l~sgs~Dg~I~  598 (894)
                            .++++++. .              ++|++.....+..++...+.-....+.+-     ..+..|++...+|.|+
T Consensus       221 ~g~~i~g~vVvvSe-~--------------~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~  285 (395)
T PF08596_consen  221 KGISIPGYVVVVSE-S--------------DIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIR  285 (395)
T ss_dssp             GT----EEEEEE-S-S--------------EEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEE
T ss_pred             cCCCcCcEEEEEcc-c--------------ceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEE
Confidence                  12333332 2              28888887777666554222223334442     2456788889999999


Q ss_pred             EEECCCCccccC--------CCceeeeEECcCCcEE
Q psy10063        599 SNTLSNGLDISE--------GSFTSSSTQQPDGLVY  626 (894)
Q Consensus       599 vwdl~~~~~~~~--------~~~v~~~~~spdg~~l  626 (894)
                      +|.+-.-+++..        ........++++|.++
T Consensus       286 i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~  321 (395)
T PF08596_consen  286 IYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIF  321 (395)
T ss_dssp             EEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EE
T ss_pred             EEECCCchHhhcccCCCccccccccccEECCCCCEE
Confidence            999987665432        1223345556666554

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.25  E-value=0.032  Score=61.35  Aligned_cols=196  Identities=13%  Similarity=0.126  Sum_probs=90.6

Q ss_pred             CCEEEEEEc-----------cCCCEEEEec-CCCcEEEEecC----CCeEEEEecC---CCC---CCeeEEEEcCCCCEE
Q psy10063        410 AKITSLLWG-----------NLDQYIITGH-AKGDICTWDLR----MGRELESISG---HAK---EPINDMQFSKDATMF  467 (894)
Q Consensus       410 ~~V~~l~~s-----------pdg~~L~sgs-~Dg~I~iWd~~----tg~~~~~l~~---h~~---~~V~~v~~spdg~~l  467 (894)
                      .++.+.-|.           .+.++|+..+ ..+.|+|+|+.    ..+..+.++.   +..   .....+.--|+|+.+
T Consensus        65 DElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~im  144 (461)
T PF05694_consen   65 DELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIM  144 (461)
T ss_dssp             --B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EE
T ss_pred             CccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEE
Confidence            567777775           2345777766 56789999987    3455666653   110   022233445677666


Q ss_pred             EEEe--CCCCc-------------------------cceEEEEEecCCCEEEEEEC--------------------CCCE
Q psy10063        468 ITAS--HSQAV-------------------------EPINDMQFSKDATMFITASK--------------------DHTA  500 (894)
Q Consensus       468 a~~~--~d~~i-------------------------~~V~~l~~spdg~~L~sgs~--------------------Dg~V  500 (894)
                      +++-  .++.-                         ..-+.+.|.|..+.+++...                    ...|
T Consensus       145 IS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l  224 (461)
T PF05694_consen  145 ISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSL  224 (461)
T ss_dssp             EEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EE
T ss_pred             EEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeE
Confidence            6542  22211                         24456677787778887642                    3579


Q ss_pred             EEEEcCCCcEEEEEeCC---CCeeEEEEc--CCCCEEEEEECCCCeEEEeccC-ccceeeEE-EEeccccce--------
Q psy10063        501 KLFTTHDRQLLKTYTTE---RPVNSAALS--PILPHVVLGGGQEAREVTTTST-KVGKFDAR-FYHLIFEEE--------  565 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~~~---~~v~~l~~s--pdg~~l~~~~~~~~~~v~~~~~-~~~~~~v~-vwd~~~~~~--------  565 (894)
                      .+||+...++++.+...   ..+..|.|.  |+..+-++++.-.. .||.+.. ..+.|.++ +.++...+.        
T Consensus       225 ~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss-~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~m  303 (461)
T PF05694_consen  225 HVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSS-SIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEM  303 (461)
T ss_dssp             EEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--E-EEEEEEE-ETTEEEEEEEEEE--EE--SS---GG
T ss_pred             EEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccc-eEEEEEEcCCCCeeeeEEEECCCcccCccccccc
Confidence            99999999999999974   235566665  44555555554332 2332222 34444432 222221110        


Q ss_pred             EEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        566 FARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       566 ~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                      ++.+..-..-|..|.+|.|.++|+... .+|.||.||+....
T Consensus       304 l~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~  345 (461)
T PF05694_consen  304 LKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF  345 (461)
T ss_dssp             GGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred             ccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence            000111135678999999999987665 68999999998754

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.25  E-value=0.1  Score=55.88  Aligned_cols=140  Identities=14%  Similarity=0.164  Sum_probs=78.5

Q ss_pred             cCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC
Q psy10063        419 NLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDH  498 (894)
Q Consensus       419 pdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg  498 (894)
                      ..+++|+.|..+| |.++++........+....                          .|..|...++-+.|++-+ |+
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~--------------------------~I~ql~vl~~~~~llvLs-d~   56 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLS--------------------------SITQLSVLPELNLLLVLS-DG   56 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEeecc--------------------------eEEEEEEecccCEEEEEc-CC
Confidence            4578999999888 9999983222222222111                          366777777666555554 59


Q ss_pred             CEEEEEcCCCcEEE---------------EEeCCCCeeEEE---EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        499 TAKLFTTHDRQLLK---------------TYTTERPVNSAA---LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       499 ~V~iwdl~~~~~~~---------------~~~~~~~v~~l~---~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      .|+++++.......               .+.....+..++   -...+.+|+++.. ..              |.+|.+
T Consensus        57 ~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~k-k~--------------i~i~~~  121 (275)
T PF00780_consen   57 QLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVK-KK--------------ILIYEW  121 (275)
T ss_pred             ccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEEC-CE--------------EEEEEE
Confidence            99999987544333               111122333333   1222334444433 33              334333


Q ss_pred             cc----c-ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        561 IF----E-EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       561 ~~----~-~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ..    . +.++++. -...+.+++|.  +..|+.|..+ ...+.|+.++
T Consensus       122 ~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~-~f~~idl~~~  167 (275)
T PF00780_consen  122 NDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSK-GFYLIDLNTG  167 (275)
T ss_pred             ECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCC-ceEEEecCCC
Confidence            32    2 3444443 33678899998  5567777654 4777787654

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.23  E-value=0.018  Score=51.17  Aligned_cols=100  Identities=17%  Similarity=0.236  Sum_probs=69.8

Q ss_pred             eEEEEEec---CC-CEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        479 INDMQFSK---DA-TMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       479 V~~l~~sp---dg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      |.+|++..   || ..|++|+.|..||||+  ..+++..+...+.|.+|+-... .+++.+...|.+-+|...       
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~-------   71 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDRS-------   71 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeCc-------
Confidence            44555544   33 5799999999999996  4578888888889999988876 678999999987766443       


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEec---CCC-EEEEEeCCCcEE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHP---DGK-SYASGGEDGFLI  598 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~sp---dg~-~l~sgs~Dg~I~  598 (894)
                      .|+|.++++.          .+.++++..   ||. .|++|-.+|.|-
T Consensus        72 ~RlWRiKSK~----------~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   72 QRLWRIKSKN----------QVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             ceeeeeccCC----------CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            6677655322          245554432   232 588888888764

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=97.19  E-value=0.013  Score=65.43  Aligned_cols=39  Identities=8%  Similarity=-0.132  Sum_probs=29.7

Q ss_pred             CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063        758 GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA  796 (894)
Q Consensus       758 ~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~  796 (894)
                      .....+.+|+.+|.+.+.|+...=|.|.|+|+..+..++
T Consensus       305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvr  343 (415)
T PF14655_consen  305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVR  343 (415)
T ss_pred             cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhh
Confidence            344457788899998888888888888888887766544

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.17  E-value=0.11  Score=55.97  Aligned_cols=98  Identities=15%  Similarity=-0.017  Sum_probs=62.3

Q ss_pred             ceEEEeeCCCCCEEEEecC-CCcEEEEEccC--Cce-------eeccc-cCCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063        762 IGFKMPEPPKREKLALALA-DKVSERYRDRK--NKA-------TAGFL-LSCPDFLFDFDTTREVTTTSTKVGKFDARFY  830 (894)
Q Consensus       762 ~v~~la~spdg~~Latgs~-Dg~I~iwd~~~--~~~-------~~~~~-~~~~~~~fS~dg~~l~~as~d~~g~~~I~vw  830 (894)
                      .-..|+||||++.|..+.. .+.|..|++..  +..       ..... .....++...+|.+-+++...+.   .|.+|
T Consensus       164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~---~v~~~  240 (307)
T COG3386         164 IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGG---RVVRF  240 (307)
T ss_pred             ecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCc---eEEEE
Confidence            3457889999877776654 46677776652  111       00111 11234566777776655544432   49999


Q ss_pred             ecCCcceeeeccCCCCCeeEEEEe-eCCcEEEEe
Q psy10063        831 HLIFEEEFARIKGHFGPINSLAFH-PDGKSYASG  863 (894)
Q Consensus       831 d~~tg~~l~~l~gH~~~V~~l~fS-pdg~~LaS~  863 (894)
                      +.+ |+++..++.+...+.+++|- ++.+.|...
T Consensus       241 ~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT  273 (307)
T COG3386         241 NPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT  273 (307)
T ss_pred             CCC-CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence            999 99999998887889999997 445544443

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.16  E-value=0.068  Score=55.47  Aligned_cols=173  Identities=11%  Similarity=0.095  Sum_probs=103.4

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +.|-...|+++.|+|+.+.|++......-.||=-..|+.++++.-..-.                        ....|.|
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~------------------------DpE~Iey  136 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFS------------------------DPETIEY  136 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccC------------------------ChhHeEE
Confidence            4455566999999999999998888888888877889998887643211                        2334455


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEE-----EE-----eC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLK-----TY-----TT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~-----~~-----~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      ..+++++++--.++.+.++.+..+..+.     .+     .+ ......++|+|..+.|+++-...-+.++.........
T Consensus       137 ig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l  216 (316)
T COG3204         137 IGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSL  216 (316)
T ss_pred             ecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccc
Confidence            5555555555556666666554432111     11     12 3568899999999999998888775544433222111


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCC
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      .+.+-...+  ..+  .-.-..|.++.|.+. +..||-+.+++.|...|++..
T Consensus       217 ~~~~~~~~~--~~~--~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~  265 (316)
T COG3204         217 SVHASLDPT--ADR--DLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE  265 (316)
T ss_pred             ccccccCcc--ccc--ceEeeccccceecCCCCcEEEEecCCceEEEEecCCC
Confidence            111110000  000  001235677788764 455666667777776766544

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.14  E-value=0.046  Score=61.48  Aligned_cols=176  Identities=12%  Similarity=0.099  Sum_probs=115.0

Q ss_pred             EEEEEEccCCCEEEE-ecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063        412 ITSLLWGNLDQYIIT-GHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM  490 (894)
Q Consensus       412 V~~l~~spdg~~L~s-gs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~  490 (894)
                      -.++++++++..++. ...+..|.+.|....++++.+....                          ....++|+++++.
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~--------------------------~P~~~~~~~~~~~  129 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL--------------------------GPVGLAVDPDGKY  129 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc--------------------------CCceEEECCCCCE
Confidence            346778888875544 4445789999977666555544322                          2455677777766


Q ss_pred             EEEEEC---CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063        491 FITASK---DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA  567 (894)
Q Consensus       491 L~sgs~---Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~  567 (894)
                      +..+..   ++.|.+.|..+++++........-..++++|+|..+++.......             |.+.|.......+
T Consensus       130 vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~-------------v~vi~~~~~~v~~  196 (381)
T COG3391         130 VYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNT-------------VSVIDTSGNSVVR  196 (381)
T ss_pred             EEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCe-------------EEEEeCCCcceec
Confidence            665544   688889999999988886654434999999999988888744442             6667755444442


Q ss_pred             -E---ccCCCCCeEEEEEecCCCEEEEEeCC---CcEEEEECCCCccccC----CC-ceeeeEECcCCcEE
Q psy10063        568 -R---IKGHFGPINSLAFHPDGKSYASGGED---GFLISNTLSNGLDISE----GS-FTSSSTQQPDGLVY  626 (894)
Q Consensus       568 -~---l~~h~~~V~~l~~spdg~~l~sgs~D---g~I~vwdl~~~~~~~~----~~-~v~~~~~spdg~~l  626 (894)
                       .   ...-...-..+.++++|.+++.....   +.+.+.|...+.....    +. ....+.+.|+|..+
T Consensus       197 ~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~  267 (381)
T COG3391         197 GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAA  267 (381)
T ss_pred             cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEE
Confidence             1   11122344678999999976655443   5888888877653322    11 45567778887766

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.09  E-value=0.33  Score=55.00  Aligned_cols=113  Identities=14%  Similarity=0.218  Sum_probs=65.8

Q ss_pred             cCCCCEEEEEEccCC----CEEEEecCCCcEEEEecC-----CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        407 DQSAKITSLLWGNLD----QYIITGHAKGDICTWDLR-----MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       407 ~H~~~V~~l~~spdg----~~L~sgs~Dg~I~iWd~~-----tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      |.-..|..+.|+|-+    -.|+.......|.||.+.     ..+.+..-..+-+.+   +-+.|               
T Consensus        54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~---~pvLp---------------  115 (671)
T PF15390_consen   54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREP---FPVLP---------------  115 (671)
T ss_pred             eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCC---cccCC---------------
Confidence            455779999999853    244445567799999975     223322211111100   00111               


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcC--CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTH--DRQLLKTYTTERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~--~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                        ..+.|+|....|++-..+..-.+++++  ..+....++..+.|.|.+|..||.+|+++-+..
T Consensus       116 --QGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSs  177 (671)
T PF15390_consen  116 --QGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSS  177 (671)
T ss_pred             --CcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCe
Confidence              234466666555544333332344443  334445566788999999999999999987764

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.08  E-value=0.047  Score=57.56  Aligned_cols=145  Identities=9%  Similarity=0.022  Sum_probs=82.6

Q ss_pred             CEEEEEEccCCCEEEEec---CCCcEEEEecCCCeEEEEe-cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        411 KITSLLWGNLDQYIITGH---AKGDICTWDLRMGRELESI-SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs---~Dg~I~iWd~~tg~~~~~l-~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      .+.++++++||+.++...   ....|+++..  +.....+ .+.                           .+..-.|++
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~~g~---------------------------~l~~PS~d~   75 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVLTGG---------------------------SLTRPSWDP   75 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeeccCC---------------------------ccccccccC
Confidence            789999999999777655   2234555543  3322222 222                           355566677


Q ss_pred             CCCEEEEEECCCCEEEEE-cCCCcEEE-EEeC---CCCeeEEEEcCCCCEEEEEECC---CCeEEEeccCccceeeEEEE
Q psy10063        487 DATMFITASKDHTAKLFT-THDRQLLK-TYTT---ERPVNSAALSPILPHVVLGGGQ---EAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwd-l~~~~~~~-~~~~---~~~v~~l~~spdg~~l~~~~~~---~~~~v~~~~~~~~~~~v~vw  558 (894)
                      ++.+.+....+..++++. ...++... .+..   ...|.++.+||||.++++...+   +.+.+-           .|-
T Consensus        76 ~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va-----------~V~  144 (253)
T PF10647_consen   76 DGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVA-----------GVV  144 (253)
T ss_pred             CCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEE-----------EEE
Confidence            766666655555566663 33333221 2221   1289999999999999887732   332221           111


Q ss_pred             ecccc------ceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        559 HLIFE------EEFARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       559 d~~~~------~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      .-..+      ..+.........+..++|.+++.+++.+...+
T Consensus       145 r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  145 RDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG  187 (253)
T ss_pred             eCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence            11112      12222233456889999999998777665544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>smart00320 WD40 WD40 repeats

Probab=97.00  E-value=0.002  Score=44.48  Aligned_cols=37  Identities=19%  Similarity=0.444  Sum_probs=33.0

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWD  437 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd  437 (894)
                      ....+..|...|.+++|.+++++|++++.|+.|++|+
T Consensus         4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3456678999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.97  E-value=0.085  Score=56.94  Aligned_cols=90  Identities=17%  Similarity=0.189  Sum_probs=52.4

Q ss_pred             EEEEcC-CCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc--c-----ceEEEccC
Q psy10063        501 KLFTTH-DRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF--E-----EEFARIKG  571 (894)
Q Consensus       501 ~iwdl~-~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~--~-----~~~~~l~~  571 (894)
                      .||.+. .+..++.+.. -.....|+||||++.|+++......             |..|++..  +     .....+..
T Consensus       144 ~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~-------------i~r~~~d~~~g~~~~~~~~~~~~~  210 (307)
T COG3386         144 SLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR-------------IHRYDLDPATGPIGGRRGFVDFDE  210 (307)
T ss_pred             eEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCe-------------EEEEecCcccCccCCcceEEEccC
Confidence            445444 5666665554 3556889999999999988776532             33333321  1     11122223


Q ss_pred             CCCCeEEEEEecCCCEEEEEeCCC-cEEEEECC
Q psy10063        572 HFGPINSLAFHPDGKSYASGGEDG-FLISNTLS  603 (894)
Q Consensus       572 h~~~V~~l~~spdg~~l~sgs~Dg-~I~vwdl~  603 (894)
                      +.+..-.++...+|.+.+++..+| .|.+|+.+
T Consensus       211 ~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd  243 (307)
T COG3386         211 EPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD  243 (307)
T ss_pred             CCCCCCceEEeCCCCEEEecccCCceEEEECCC
Confidence            445556677777777665444443 67777766

>KOG1898|consensus

Probab=96.93  E-value=1.3  Score=53.41  Aligned_cols=108  Identities=11%  Similarity=0.013  Sum_probs=64.0

Q ss_pred             EeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCC-CceE--eecCCCeEEEEecCCCCceeEEEeecCCcceeeecc
Q psy10063        766 MPEPPKREKLALALADKVSERYRDRKNKATAGFLLSC-PDFL--FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK  842 (894)
Q Consensus       766 la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~-~~~~--fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~  842 (894)
                      +++.|-..++++| ....+++|++.+.+.++...... +..+  ....+.+++++....  .+....|+.+..+++....
T Consensus       939 ~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~RI~VgD~qe--SV~~~~y~~~~n~l~~fad 1015 (1205)
T KOG1898|consen  939 GAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGARIVVGDIQE--SVHFVRYRREDNQLIVFAD 1015 (1205)
T ss_pred             eEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEeecceEEEEeeccc--eEEEEEEecCCCeEEEEeC
Confidence            4455665666655 44569999999888776655443 3222  344667777765543  2345667666555443222


Q ss_pred             -CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        843 -GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       843 -gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                       .-...|+++.+-.. ..||.+..=|.+.+-++...
T Consensus      1016 D~~pR~Vt~~~~lD~-~tvagaDrfGNi~~vR~P~d 1050 (1205)
T KOG1898|consen 1016 DPVPRHVTALELLDY-DTVAGADRFGNIAVVRIPPD 1050 (1205)
T ss_pred             CCccceeeEEEEecC-CceeeccccCcEEEEECCCc
Confidence             22345766666544 44777777777777776544

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.93  E-value=0.016  Score=69.33  Aligned_cols=139  Identities=16%  Similarity=0.245  Sum_probs=95.2

Q ss_pred             cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEEEECCCCEEEEEcC
Q psy10063        428 HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFITASKDHTAKLFTTH  506 (894)
Q Consensus       428 s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~  506 (894)
                      .....|+-.||+.|+.+..++.|....|  ..|.|+.+                  |.. .....+.|-.+..|..||.|
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v--~~~~p~~K------------------~aqlt~e~tflGls~n~lfriDpR  560 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHDDIPV--VDIAPDSK------------------FAQLTNEQTFLGLSDNSLFRIDPR  560 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCCCcce--eEeccccc------------------ccccCCCceEEEECCCceEEeccC
Confidence            3456799999999999999998875222  23333221                  110 12345667778889999988


Q ss_pred             CC--cEEE----EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063        507 DR--QLLK----TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  580 (894)
Q Consensus       507 ~~--~~~~----~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~  580 (894)
                      -.  +++.    .+.......|++-..+| +||+|+.+|.              ||+||-...+....|.+-..+|.+|.
T Consensus       561 ~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~--------------IRLyd~~g~~AKT~lp~lG~pI~~iD  625 (794)
T PF08553_consen  561 LSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGD--------------IRLYDRLGKRAKTALPGLGDPIIGID  625 (794)
T ss_pred             CCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCc--------------EEeecccchhhhhcCCCCCCCeeEEE
Confidence            43  2332    22234567888877776 7899999996              88888543344445677788999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEEC
Q psy10063        581 FHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       581 ~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      .+.||+||++.+. ..|.|++.
T Consensus       626 vt~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  626 VTADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             ecCCCcEEEEeec-ceEEEEEE
Confidence            9999999887764 56777765

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.88  E-value=0.049  Score=58.40  Aligned_cols=157  Identities=15%  Similarity=0.205  Sum_probs=75.1

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .+....+-.+.|..+..++||++|++++....+.-||-........-+....                         .|.
T Consensus       136 W~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~-------------------------riq  190 (302)
T PF14870_consen  136 WQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSR-------------------------RIQ  190 (302)
T ss_dssp             EEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS--------------------------EE
T ss_pred             eeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccc-------------------------eeh
Confidence            3445556668899999999999999987766667887543222222222223                         566


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEE-cCCCcEEEE--Ee---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFT-THDRQLLKT--YT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwd-l~~~~~~~~--~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.|.+++.+.+.+ ..|.|++=+ ....+....  +.   ..-.+..++|.+++...+++ ..+.+             
T Consensus       191 ~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~g-g~G~l-------------  255 (302)
T PF14870_consen  191 SMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVG-GSGTL-------------  255 (302)
T ss_dssp             EEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEE-STT-E-------------
T ss_pred             hceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEe-CCccE-------------
Confidence            67777766654433 667666665 222222222  11   12348899999886666654 44432             


Q ss_pred             EEEEeccccceEEEc---cCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063        555 ARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFLISN  600 (894)
Q Consensus       555 v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw  600 (894)
                        +.....|+--++.   ..-...++.|.|..+.+-++. +.+|.|.-|
T Consensus       256 --~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~l-G~~G~ll~~  301 (302)
T PF14870_consen  256 --LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVL-GQDGVLLRY  301 (302)
T ss_dssp             --EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             --EEeCCCCccceECccccCCCCceEEEEEcCCCceEEE-CCCcEEEEe
Confidence              2222233322222   223456888999866555554 567877655

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.85  E-value=0.31  Score=53.70  Aligned_cols=29  Identities=34%  Similarity=0.476  Sum_probs=20.4

Q ss_pred             cCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy10063        570 KGHFGPINSLAFHPDGKSYASGGEDGFLI  598 (894)
Q Consensus       570 ~~h~~~V~~l~~spdg~~l~sgs~Dg~I~  598 (894)
                      ......+..|++.|||.++++-+.+|.|+
T Consensus       302 ~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  302 GGFGGRPRDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             TTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred             ccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence            34455788999999988888777777764

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.81  E-value=0.21  Score=51.95  Aligned_cols=158  Identities=15%  Similarity=0.137  Sum_probs=91.4

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      +.......+.|..+|.++-+.+.-|  .|+.+|+.+|+.++...-.....                        -..|+.
T Consensus        42 d~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~F------------------------gEGit~   97 (264)
T PF05096_consen   42 DPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYF------------------------GEGITI   97 (264)
T ss_dssp             -TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--------------------------EEEEEE
T ss_pred             CCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCcccc------------------------ceeEEE
Confidence            4456678899988888888877665  69999999999877665443201                        112222


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      .. .++....=.++...+||..+.+.+..+...+.=+.|+  .||+.|+...+...              |+++|.++.+
T Consensus        98 ~~-d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~--------------L~~~dP~~f~  160 (264)
T PF05096_consen   98 LG-DKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSR--------------LYFLDPETFK  160 (264)
T ss_dssp             ET-TEEEEEESSSSEEEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSE--------------EEEE-TTT-S
T ss_pred             EC-CEEEEEEecCCeEEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccc--------------eEEECCcccc
Confidence            22 2222333367889999999999999998776667777  56777777766665              6666666655


Q ss_pred             eEEEccCC-----CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        565 EFARIKGH-----FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       565 ~~~~l~~h-----~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .++.+.-.     -..+.-|.|. +|...|=.=....|.+.|..+|+
T Consensus       161 ~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~  206 (264)
T PF05096_consen  161 EVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGK  206 (264)
T ss_dssp             EEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-B
T ss_pred             eEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCe
Confidence            55544322     1234445554 45444433334455555655543

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.81  E-value=1.1  Score=49.23  Aligned_cols=58  Identities=16%  Similarity=0.158  Sum_probs=37.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE---EEEEe-----CCCCeeEEEEcCC---CCEEEEEEC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL---LKTYT-----TERPVNSAALSPI---LPHVVLGGG  537 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~---~~~~~-----~~~~v~~l~~spd---g~~l~~~~~  537 (894)
                      .-++|+|.|||++|++ ...|.|++++ ..+..   +..+.     ....+..++|+|+   ..+|++...
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t   71 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYT   71 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEE
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEE
Confidence            4678999999887665 5699999998 44544   22231     2457899999995   345555443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.76  E-value=0.048  Score=64.42  Aligned_cols=114  Identities=12%  Similarity=-0.036  Sum_probs=71.8

Q ss_pred             cceEEEEEecCCCEEEEEE------CCCC--EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCe-EEEecc
Q psy10063        477 EPINDMQFSKDATMFITAS------KDHT--AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAR-EVTTTS  547 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs------~Dg~--V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~-~v~~~~  547 (894)
                      ..+.+.+++|||+.++...      .|+.  |.+++. .+.. +.+..........|+|||+.|++......+ ++... 
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~-  426 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRD-  426 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeecCCCCCCceECCCCCceEEEecCcceEEEecc-
Confidence            4678899999999888765      2444  444454 2333 333333348899999999998888654332 11111 


Q ss_pred             CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLIS  599 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~v  599 (894)
                        .+.-++.+.++..++...   ...+.|..+.|||||.+|+... +|.|++
T Consensus       427 --~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        427 --PATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             --CCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence              111124444555444332   3356799999999999988766 467766

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=96.57  E-value=0.25  Score=54.25  Aligned_cols=111  Identities=14%  Similarity=0.208  Sum_probs=68.5

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc-EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ-LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|.+|+-- .|. |+.+. .+.|++|++...+ ++..-..+..+..++....+.+|++|...+.+.++            
T Consensus        90 ~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~------------  154 (321)
T PF03178_consen   90 PVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLL------------  154 (321)
T ss_dssp             -EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEE------------
T ss_pred             cceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEE------------
Confidence            56666655 344 44443 4789999998887 66655554443444444446799999988875443            


Q ss_pred             EEeccccceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        557 FYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       557 vwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      .|+.. ...+..+.  ....++.++.|-.+++.++.+..+|.|.++....
T Consensus       155 ~~~~~-~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~  203 (321)
T PF03178_consen  155 RYDEE-NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP  203 (321)
T ss_dssp             EEETT-TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred             EEEcc-CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence            23332 22122222  2344688888886767999999999999998763

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.54  E-value=0.95  Score=50.14  Aligned_cols=114  Identities=12%  Similarity=-0.029  Sum_probs=52.4

Q ss_pred             CCCEEEEEE-CCCCEEEEEcC----CCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        487 DATMFITAS-KDHTAKLFTTH----DRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       487 dg~~L~sgs-~Dg~V~iwdl~----~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      +.++|+..+ ..+.|+|+|+.    ..++.+.++..        .....+..-|+|+.++++-++..        ..+.-
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~--------G~g~G  157 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDAD--------GNGPG  157 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETT--------S-S--
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCC--------CCCCC
Confidence            456777766 66889999987    34566666521        12334445578888877644321        01222


Q ss_pred             eEEEEeccccceEEEccCC---CCCeEEEEEecCCCEEEEEeC--------------------CCcEEEEECCCCccc
Q psy10063        554 DARFYHLIFEEEFARIKGH---FGPINSLAFHPDGKSYASGGE--------------------DGFLISNTLSNGLDI  608 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h---~~~V~~l~~spdg~~l~sgs~--------------------Dg~I~vwdl~~~~~~  608 (894)
                      .+.++|-++.+.+......   ...-+.+.|.|....+++...                    ...|.+||+...+.+
T Consensus       158 gf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~  235 (461)
T PF05694_consen  158 GFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLL  235 (461)
T ss_dssp             EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEE
T ss_pred             cEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEe
Confidence            3566666655555544322   234456777777777776532                    256999999887644

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.52  E-value=0.14  Score=61.50  Aligned_cols=136  Identities=10%  Similarity=0.067  Sum_probs=88.4

Q ss_pred             CCCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC-------CCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        487 DATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPI-------LPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       487 dg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spd-------g~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      +..+|+.. .....|+-.||+.|+++..+..+..+.-..|.|+       ....++|-.+..              |..|
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~--------------lfri  557 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNS--------------LFRI  557 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCc--------------eEEe
Confidence            44444443 3457899999999999999997655444555554       234555655555              5666


Q ss_pred             eccccc--eEEE-c--cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc---cc-cCCCceeeeEECcCCcEE-Ee
Q psy10063        559 HLIFEE--EFAR-I--KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL---DI-SEGSFTSSSTQQPDGLVY-PS  628 (894)
Q Consensus       559 d~~~~~--~~~~-l--~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~---~~-~~~~~v~~~~~spdg~~l-~~  628 (894)
                      |.+-..  ++.. .  ........|++-..+| +||.|+.+|.||+||--...   .+ ..|..+.++..+.||+|+ ++
T Consensus       558 DpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaT  636 (794)
T PF08553_consen  558 DPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILAT  636 (794)
T ss_pred             ccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEe
Confidence            665432  2210 1  1233467788877766 69999999999999843221   12 348899999999999998 45


Q ss_pred             cCCeEEEEe
Q psy10063        629 QGGHIHSLS  637 (894)
Q Consensus       629 ~~g~i~~~~  637 (894)
                      ....+..+.
T Consensus       637 c~tyLlLi~  645 (794)
T PF08553_consen  637 CKTYLLLID  645 (794)
T ss_pred             ecceEEEEE
Confidence            555555554

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG1008|consensus

Probab=96.50  E-value=0.00062  Score=76.20  Aligned_cols=166  Identities=12%  Similarity=0.156  Sum_probs=100.0

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEec----CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGH----AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs----~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ..-+|.....+++|.+ |..+||.|-    .|..+.|||+.++-.+         +.....|+. +          ....
T Consensus        97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltv---------Pke~~~fs~-~----------~l~g  156 (783)
T KOG1008|consen   97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTV---------PKESPLFSS-S----------TLDG  156 (783)
T ss_pred             ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCC---------Ccccccccc-c----------cccC
Confidence            3446778899999998 556777773    3567999998866210         111122221 0          1114


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      ..+++|..+.++|++|...+.|+++|++..-..........+..+..+| .+.+++.-. ++.              |.+
T Consensus       157 qns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~--------------iAi  221 (783)
T KOG1008|consen  157 QNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGD--------------IAI  221 (783)
T ss_pred             ccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc-cCc--------------eee
Confidence            5578888888999999999999999998322211111223566677777 556666554 665              677


Q ss_pred             Ee-cccc-ceEEEccCC----CCCeEEEEEecCCC-EEEEEeC-CCcEEEEECCC
Q psy10063        558 YH-LIFE-EEFARIKGH----FGPINSLAFHPDGK-SYASGGE-DGFLISNTLSN  604 (894)
Q Consensus       558 wd-~~~~-~~~~~l~~h----~~~V~~l~~spdg~-~l~sgs~-Dg~I~vwdl~~  604 (894)
                      || .+.- .+++.+...    ...+..++|.|-.. .|++... .+.|+++++..
T Consensus       222 wD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  222 WDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             ccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            77 2221 122222111    12488999998532 4555554 46799998853

>PRK10115 protease 2; Provisional

Probab=96.50  E-value=3.2  Score=50.47  Aligned_cols=117  Identities=6%  Similarity=-0.091  Sum_probs=68.6

Q ss_pred             ceEEEEEecCCCEEEEEEC-----CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        478 PINDMQFSKDATMFITASK-----DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~-----Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .+..+.|+|||++|+.+..     ...|++.|+.+|+.+........ ..++|.+|++.|+....+..        ....
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~~~~~~--------~~~~  198 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE-PSFVWANDSWTFYYVRKHPV--------TLLP  198 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc-eEEEEeeCCCEEEEEEecCC--------CCCC
Confidence            3556677778777766532     23588889988864422211112 56999999998888766431        0122


Q ss_pred             eeEEEEecccc--ceEEEccCCCCCeE-EEEEecCCCEEEEEeC---CCcEEEEECC
Q psy10063        553 FDARFYHLIFE--EEFARIKGHFGPIN-SLAFHPDGKSYASGGE---DGFLISNTLS  603 (894)
Q Consensus       553 ~~v~vwd~~~~--~~~~~l~~h~~~V~-~l~~spdg~~l~sgs~---Dg~I~vwdl~  603 (894)
                      ++|+++++.++  +....+........ .+..+.|+++++..+.   ++.+.+|+.+
T Consensus       199 ~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~  255 (686)
T PRK10115        199 YQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE  255 (686)
T ss_pred             CEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence            45888888877  33334443333333 3333448887665443   3467777753

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.42  E-value=0.2  Score=56.06  Aligned_cols=40  Identities=5%  Similarity=0.039  Sum_probs=35.0

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT  516 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~  516 (894)
                      +.+.+|+.+|++++.|+...=|.|.|+|+..+..++.+++
T Consensus       308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKG  347 (415)
T PF14655_consen  308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKG  347 (415)
T ss_pred             ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhcc
Confidence            3678899999999888877779999999999999888886

>KOG4640|consensus

Probab=96.40  E-value=0.014  Score=65.85  Aligned_cols=90  Identities=12%  Similarity=0.070  Sum_probs=72.8

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .|..+.|+|.-.+||.+..+|.|.+..+. .+.+..+. ++..+. +++|.|||+.|++|-.+|.              |
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~--------------I   86 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGT--------------I   86 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCe--------------E
Confidence            58889999999999999999999999988 66777777 556666 9999999999999999997              7


Q ss_pred             EEEeccccceEEEc-cCCCCCeEEEEEe
Q psy10063        556 RFYHLIFEEEFARI-KGHFGPINSLAFH  582 (894)
Q Consensus       556 ~vwd~~~~~~~~~l-~~h~~~V~~l~~s  582 (894)
                      ++.|++.+..+..+ ......|.++-|.
T Consensus        87 ~L~Dve~~~~l~~~~~s~e~~is~~~w~  114 (665)
T KOG4640|consen   87 RLHDVEKGGRLVSFLFSVETDISKGIWD  114 (665)
T ss_pred             EEEEccCCCceeccccccccchheeecc
Confidence            88888877766652 2234567777775

>KOG1008|consensus

Probab=96.40  E-value=0.0017  Score=72.91  Aligned_cols=153  Identities=14%  Similarity=0.174  Sum_probs=97.9

Q ss_pred             CCCCEEEEEEccCCC--EEEEecCCCcEEEEecCCCeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        408 QSAKITSLLWGNLDQ--YIITGHAKGDICTWDLRMGREL--ESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       408 H~~~V~~l~~spdg~--~L~sgs~Dg~I~iWd~~tg~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      ....+.|+++.-+.+  +|+.|..+|.|.+-.++.....  ....++..                         ...+++
T Consensus        55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar-------------------------~Ct~lA  109 (783)
T KOG1008|consen   55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYAR-------------------------PCTSLA  109 (783)
T ss_pred             cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccc-------------------------cccccc
Confidence            346678888876544  7788888899888776533211  11122322                         677888


Q ss_pred             Eec-CCCEEEEEE----CCCCEEEEEcCCC--cEEE--EEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        484 FSK-DATMFITAS----KDHTAKLFTTHDR--QLLK--TYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       484 ~sp-dg~~L~sgs----~Dg~V~iwdl~~~--~~~~--~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      |.+ |..+||.|-    .|..+.|||+.++  .+..  .|.  ......+++|..+.+.+++|...+.            
T Consensus       110 wneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~------------  177 (783)
T KOG1008|consen  110 WNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRS------------  177 (783)
T ss_pred             cccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccch------------
Confidence            877 667777763    3567999999876  2222  122  2345668999988888888877765            


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEE
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNT  601 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwd  601 (894)
                        +.++|++.. +.....-....|..+..+| .+.|+++-. ||.|.+||
T Consensus       178 --~~ifdlRqs-~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD  223 (783)
T KOG1008|consen  178 --VHIFDLRQS-LDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWD  223 (783)
T ss_pred             --hhhhhhhhh-hhhhhhhhhhhcccceecCCCCCceeccc-cCceeecc
Confidence              667776621 1111111233556677777 677777765 99999999

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=96.33  E-value=0.19  Score=55.14  Aligned_cols=134  Identities=13%  Similarity=0.104  Sum_probs=78.0

Q ss_pred             CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC----CCEEEEEEC----------
Q psy10063        431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD----ATMFITASK----------  496 (894)
Q Consensus       431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd----g~~L~sgs~----------  496 (894)
                      +.|+|.|..+.+.+..+.......+.+++                     .+.|..+    ..+|+.|..          
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~---------------------~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~   60 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLC---------------------SVKLKGDSTGKKEYIVVGTAFNYGEDPEPS   60 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEE---------------------EEEETTS---SSEEEEEEEEE--TTSSS-S
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEE---------------------EEEEcCccccccCEEEEEeccccccccccc
Confidence            35888888877777666544432333332                     2222221    234444431          


Q ss_pred             CCCEEEEEcCCC-----cE--EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEE
Q psy10063        497 DHTAKLFTTHDR-----QL--LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFAR  568 (894)
Q Consensus       497 Dg~V~iwdl~~~-----~~--~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~  568 (894)
                      .|.|.++++...     ++  +......++|.+|+-.  +.+|+++.+..               |.+|++...+ .+..
T Consensus        61 ~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~~g~~---------------l~v~~l~~~~~l~~~  123 (321)
T PF03178_consen   61 SGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVAVGNK---------------LYVYDLDNSKTLLKK  123 (321)
T ss_dssp             -EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEEETTE---------------EEEEEEETTSSEEEE
T ss_pred             CcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEeecCE---------------EEEEEccCcccchhh
Confidence            288999999884     32  2334457889998877  34566666544               7778777666 3332


Q ss_pred             ccC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        569 IKG-HFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       569 l~~-h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      -.. ....+.++...  +.+|+.|+....|.++.++.
T Consensus       124 ~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~  158 (321)
T PF03178_consen  124 AFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDE  158 (321)
T ss_dssp             EEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEET
T ss_pred             heecceEEEEEEecc--ccEEEEEEcccCEEEEEEEc
Confidence            211 22255555554  56999999888888876543

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG2395|consensus

Probab=96.28  E-value=0.21  Score=55.63  Aligned_cols=202  Identities=10%  Similarity=0.131  Sum_probs=113.9

Q ss_pred             CCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        410 AKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       410 ~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      +.|.++++.. +..+|+.|..  .++|+.   +..+..+... . + .++.+...  -+..+ ....+.+-..|-...+.
T Consensus       277 ~~i~sl~~~a~~NS~Lvv~~~--ns~V~R---n~~iGVfk~e-k-g-l~f~~~i~--n~s~~-~g~S~~P~K~mL~~~ds  345 (644)
T KOG2395|consen  277 GGIGSLDEGALDNSFLVVGYG--NSYVTR---NNRIGVFKNE-K-G-LEFKAAIK--NVSDG-DGKSIDPHKAMLHRADS  345 (644)
T ss_pred             cccchhhhcccCCceEEeccc--ceEEEe---cceeeeeccC-C-c-eEEEeccC--cccCC-CccccCcchhhhhcccc
Confidence            5677787775 4456666643  366654   3334444322 2 1 12222111  00000 00011122233333455


Q ss_pred             CEEE-EEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCE-------EEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        489 TMFI-TASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPH-------VVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       489 ~~L~-sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~-------l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      .+|+ .+.....|+-.|++.|+++..++.+..|.-+.+.|+.+.       -++|-.+..              |..||.
T Consensus       346 nlil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~--------------vfriDp  411 (644)
T KOG2395|consen  346 NLILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNS--------------VFRIDP  411 (644)
T ss_pred             ceEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCc--------------eEEecc
Confidence            5444 445556788889999999999998888888888887642       233333333              555665


Q ss_pred             ccc-c-eEEEccCCC----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc----cccCCCceeeeEECcCCcEEEe-c
Q psy10063        561 IFE-E-EFARIKGHF----GPINSLAFHPDGKSYASGGEDGFLISNTLSNGL----DISEGSFTSSSTQQPDGLVYPS-Q  629 (894)
Q Consensus       561 ~~~-~-~~~~l~~h~----~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~----~~~~~~~v~~~~~spdg~~l~~-~  629 (894)
                      +-. . .+....+|+    ....|++-..+| +||.|+.+|.||+||--..+    ....|..+..+..+.+|+++.+ .
T Consensus       412 Rv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc  490 (644)
T KOG2395|consen  412 RVQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC  490 (644)
T ss_pred             cccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec
Confidence            421 1 222223332    245666665555 79999999999999973222    1135888899999999998844 4


Q ss_pred             CCeEEEEe
Q psy10063        630 GGHIHSLS  637 (894)
Q Consensus       630 ~g~i~~~~  637 (894)
                      +..+..++
T Consensus       491 ~tyLlLi~  498 (644)
T KOG2395|consen  491 KTYLLLID  498 (644)
T ss_pred             ccEEEEEE
Confidence            44444333

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.23  E-value=1.9  Score=44.95  Aligned_cols=109  Identities=12%  Similarity=0.005  Sum_probs=69.0

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE---EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL---LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~---~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      -+..+.|+  ++++..+..+.-++|+|+.+...   +..+...+-.+++..  .|++.+++..+..              
T Consensus        88 l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddg--------------  149 (370)
T COG5276          88 LFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDG--------------  149 (370)
T ss_pred             hhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCc--------------
Confidence            35556665  45677777788899999986543   333333344455544  4788888886665              


Q ss_pred             EEEEecc---ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        555 ARFYHLI---FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       555 v~vwd~~---~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +.+.|+.   +.+...++....+.-+.++.|  |++-+.+..|+-+.|-|+....
T Consensus       150 fLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~  202 (370)
T COG5276         150 FLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPH  202 (370)
T ss_pred             EEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCC
Confidence            3444443   334444444444555667775  6677777789999999997653

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=96.21  E-value=0.27  Score=55.42  Aligned_cols=71  Identities=13%  Similarity=0.187  Sum_probs=48.6

Q ss_pred             CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCC-CCeEEEEEecCCCEEEEEeCC
Q psy10063        516 TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-GPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       516 ~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~-~~V~~l~~spdg~~l~sgs~D  594 (894)
                      .+.+|..+.+...| .|.++..+|               +..||...++.++...... ..|..+..+-.|+ |..|..+
T Consensus       163 ~d~~V~aLv~D~~g-~lWvgT~dG---------------L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~-LWVGTdq  225 (671)
T COG3292         163 KDTPVVALVFDANG-RLWVGTPDG---------------LSYFDAGRGKALQLASPPLDKAINALIADVQGR-LWVGTDQ  225 (671)
T ss_pred             cCccceeeeeeccC-cEEEecCCc---------------ceEEccccceEEEcCCCcchhhHHHHHHHhcCc-EEEEecc
Confidence            35678888888877 567777777               7788888888776655444 5666666665665 5666655


Q ss_pred             CcEEEEECCC
Q psy10063        595 GFLISNTLSN  604 (894)
Q Consensus       595 g~I~vwdl~~  604 (894)
                      | |++.+.+.
T Consensus       226 G-v~~~e~~G  234 (671)
T COG3292         226 G-VYLQEAEG  234 (671)
T ss_pred             c-eEEEchhh
Confidence            5 66666554

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.14  E-value=0.52  Score=55.34  Aligned_cols=178  Identities=13%  Similarity=0.121  Sum_probs=102.3

Q ss_pred             EEccCCCEEEEecCC-----C-----------cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        416 LWGNLDQYIITGHAK-----G-----------DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       416 ~~spdg~~L~sgs~D-----g-----------~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      .+.+...+|+.+...     +           .|.-.|+++|+.+-.++.... .++...+..               ..
T Consensus       240 s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~-D~wD~d~~~---------------~p  303 (527)
T TIGR03075       240 SYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPH-DEWDYDGVN---------------EM  303 (527)
T ss_pred             eEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCC-CCccccCCC---------------Cc
Confidence            555656666665421     1           466778888888777665333 333222111               11


Q ss_pred             EEEEEecCCC---EEEEEECCCCEEEEEcCCCcEEEE--------Ee-C-C----CC-----------------------
Q psy10063        480 NDMQFSKDAT---MFITASKDHTAKLFTTHDRQLLKT--------YT-T-E----RP-----------------------  519 (894)
Q Consensus       480 ~~l~~spdg~---~L~sgs~Dg~V~iwdl~~~~~~~~--------~~-~-~----~~-----------------------  519 (894)
                      .-+.+..+|+   .|+.+..+|.+++.|.++|+++..        +. . .    .+                       
T Consensus       304 ~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~  383 (527)
T TIGR03075       304 ILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGF  383 (527)
T ss_pred             EEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCC
Confidence            1112223554   677888899999999988887621        10 0 0    00                       


Q ss_pred             -----eeEEEEcCCCCEEEEEECCCCeEEEecc------------------C-ccceeeEEEEeccccceEEEccCCCCC
Q psy10063        520 -----VNSAALSPILPHVVLGGGQEAREVTTTS------------------T-KVGKFDARFYHLIFEEEFARIKGHFGP  575 (894)
Q Consensus       520 -----v~~l~~spdg~~l~~~~~~~~~~v~~~~------------------~-~~~~~~v~vwd~~~~~~~~~l~~h~~~  575 (894)
                           -..++++|+..+|++...+....++...                  . ....-.|.-+|+.+|+.+-+.......
T Consensus       384 ~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~  463 (527)
T TIGR03075       384 LGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPL  463 (527)
T ss_pred             cCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCC
Confidence                 0226788888888877766433222110                  0 001123778899999887765432222


Q ss_pred             eEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC
Q psy10063        576 INSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE  610 (894)
Q Consensus       576 V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~  610 (894)
                      ..++ +.-.+.+++.+..||.|+.+|.++++.+.+
T Consensus       464 ~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~  497 (527)
T TIGR03075       464 WGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWK  497 (527)
T ss_pred             CCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEE
Confidence            2222 222455777788899999999999987754

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG2395|consensus

Probab=96.11  E-value=0.072  Score=59.13  Aligned_cols=144  Identities=15%  Similarity=0.183  Sum_probs=96.8

Q ss_pred             EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEE
Q psy10063        424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLF  503 (894)
Q Consensus       424 L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iw  503 (894)
                      |.++.....|+-.|++.|+.+...+.+..  |.-+.+.|+.+.-             .|  .+  ..-+.|-.|..|.-|
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d--i~mv~~t~d~K~~-------------Ql--~~--e~TlvGLs~n~vfri  409 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD--INMVDITPDFKFA-------------QL--TS--EQTLVGLSDNSVFRI  409 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCC--cceeeccCCcchh-------------cc--cc--cccEEeecCCceEEe
Confidence            34555556788889999999999998874  6666666655321             11  11  123446678889999


Q ss_pred             EcCC-Cc-EEEEEe-----CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe
Q psy10063        504 TTHD-RQ-LLKTYT-----TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI  576 (894)
Q Consensus       504 dl~~-~~-~~~~~~-----~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V  576 (894)
                      |.+- ++ .+...+     ......|++-..+| +|++|+.+|.              ||+||-........|.+...+|
T Consensus       410 DpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~Gd--------------IRLYdri~~~AKTAlPgLG~~I  474 (644)
T KOG2395|consen  410 DPRVQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGD--------------IRLYDRIGRRAKTALPGLGDAI  474 (644)
T ss_pred             cccccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCc--------------EEeehhhhhhhhhcccccCCce
Confidence            9873 22 222222     23445666665554 7888888886              8899875444455678888999


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        577 NSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       577 ~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      ..|..+.||++|++.+ +..|.+.++
T Consensus       475 ~hVdvtadGKwil~Tc-~tyLlLi~t  499 (644)
T KOG2395|consen  475 KHVDVTADGKWILATC-KTYLLLIDT  499 (644)
T ss_pred             eeEEeeccCcEEEEec-ccEEEEEEE
Confidence            9999999999988765 456666655

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.97  E-value=1.3  Score=49.49  Aligned_cols=119  Identities=8%  Similarity=0.056  Sum_probs=57.2

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCC-----CeE--E-EEecCC----CCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRM-----GRE--L-ESISGH----AKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-----g~~--~-~~l~~h----~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      .....|+|.++|  |++++....+++.|...     ++.  + ..+...    .. ....++|.|||.+.++.+..+.. 
T Consensus        72 ~~p~Gi~~~~~G--lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~-~~~~l~~gpDG~LYv~~G~~~~~-  147 (367)
T TIGR02604        72 SMVTGLAVAVGG--VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHH-SLNSLAWGPDGWLYFNHGNTLAS-  147 (367)
T ss_pred             CCccceeEecCC--EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccc-cccCceECCCCCEEEecccCCCc-
Confidence            345778888888  44444443333445421     121  1 122221    12 46678888888766654432110 


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG  536 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~  536 (894)
                      .+.    .+...-.......|.|.-++...++......+..-...++|+++|+++++-.
T Consensus       148 ~~~----~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       148 KVT----RPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             eec----cCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence            000    0100000000122455556665544332222334567899999998876644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG2079|consensus

Probab=95.96  E-value=0.066  Score=64.14  Aligned_cols=76  Identities=16%  Similarity=0.344  Sum_probs=56.2

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC--CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK--EPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~--~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      -.++|.+++|+-||++|+.|-.+|.|.+||+..++.++.+..|..  .+|..+.+..++..+.++...|   .++.+.|+
T Consensus       129 v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~G---sf~~lv~n  205 (1206)
T KOG2079|consen  129 VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGG---SFWKLVFN  205 (1206)
T ss_pred             cCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCC---ceEEEEec
Confidence            458999999999999999999999999999999999998886655  2334444444555555555544   35555554


Q ss_pred             c
Q psy10063        486 K  486 (894)
Q Consensus       486 p  486 (894)
                      .
T Consensus       206 k  206 (1206)
T KOG2079|consen  206 K  206 (1206)
T ss_pred             h
Confidence            3

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.94  E-value=1.3  Score=46.35  Aligned_cols=123  Identities=11%  Similarity=0.097  Sum_probs=81.8

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .|.++.|+|+.+.|++......-.||=-..|++++.+..  -.....|.|...|++.++--.++.+.++.++.......+
T Consensus        87 nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~  166 (316)
T COG3204          87 NVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISA  166 (316)
T ss_pred             cccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEec
Confidence            578888999888888887777777776678999998875  356778888888877776666665544444333222111


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +...    -.+............++|++..+.|+.+-+-.-+.||.+..
T Consensus       167 ~~~~----i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~  211 (316)
T COG3204         167 KVQK----IPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQ  211 (316)
T ss_pred             cceE----EeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEec
Confidence            1111    11111112255778999999988888887777788877653

>KOG1916|consensus

Probab=95.91  E-value=0.0018  Score=75.17  Aligned_cols=94  Identities=18%  Similarity=0.308  Sum_probs=65.6

Q ss_pred             CCCCEEEEEEcc---CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        408 QSAKITSLLWGN---LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       408 H~~~V~~l~~sp---dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ....+.-|.|+|   ..-++..+..++.|+|..+..... ..|.+|.. ++..++|-..|-.++             -.+
T Consensus       179 ~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~-~~~d~a~~~~g~~~l-------------~~l  243 (1283)
T KOG1916|consen  179 YGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQ-RVTDMAFFAEGVLKL-------------ASL  243 (1283)
T ss_pred             CCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCC-CcccHHHHhhchhhh-------------eee
Confidence            344455566655   556888888889988877664433 55677877 888888887764322             227


Q ss_pred             ecCCCEEEEEECCCCEEEEEcC-CC----cEEEEEeC
Q psy10063        485 SKDATMFITASKDHTAKLFTTH-DR----QLLKTYTT  516 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~-~~----~~~~~~~~  516 (894)
                      +|||..|+.++.||.|++|.+. .|    +|++..+.
T Consensus       244 SpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkp  280 (1283)
T KOG1916|consen  244 SPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKP  280 (1283)
T ss_pred             CCCCcEEEEeecCCccceeeeeeeccccHhhhhccCC
Confidence            8999999999999999999764 23    44555553

>PRK13684 Ycf48-like protein; Provisional

Probab=95.77  E-value=0.85  Score=50.26  Aligned_cols=150  Identities=12%  Similarity=0.162  Sum_probs=77.1

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEE-EecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICT-WDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~i-Wd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .+.+.++.+.+++.+++.+. .|.+.. +| ..++.-..+......                        .+.++.+.++
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~-~gg~tW~~~~~~~~~------------------------~l~~i~~~~~  225 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWE-PGQTAWTPHQRNSSR------------------------RLQSMGFQPD  225 (334)
T ss_pred             cceEEEEEECCCCeEEEEeC-CceEEEEcC-CCCCeEEEeeCCCcc------------------------cceeeeEcCC
Confidence            45688899999887776664 454432 22 222222222222211                        4566666666


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      ++.++++ ..|.+++=....|+.......     ...+.+++|.+++..+ +++.++.+               +.....
T Consensus       226 g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~-~~G~~G~v---------------~~S~d~  288 (334)
T PRK13684        226 GNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIW-AGGGNGTL---------------LVSKDG  288 (334)
T ss_pred             CCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEE-EEcCCCeE---------------EEeCCC
Confidence            6655543 345443222334443332221     2347788999877654 45555532               222222


Q ss_pred             cceEEEcc---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        563 EEEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       563 ~~~~~~l~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      |+.-..+.   .-......+.|..+++.++ .+..|.|..|+-
T Consensus       289 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~~  330 (334)
T PRK13684        289 GKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYVG  330 (334)
T ss_pred             CCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEecC
Confidence            33222222   2223577788876666555 456688777753

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.76  E-value=3.6  Score=44.26  Aligned_cols=147  Identities=18%  Similarity=0.135  Sum_probs=67.9

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc-EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ-LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      +.+..+..++||++|++++....+.-||--... ..+......+|..|.|.+++...+++ ..+.++.-.....     .
T Consensus       145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~-----~  218 (302)
T PF14870_consen  145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDD-----G  218 (302)
T ss_dssp             --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTE-----E
T ss_pred             ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCC-----c
Confidence            578888889999988888665555677754322 22222346889999999998766655 5554322110000     1


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc---c----CCCceeeeEECcC-CcEEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI---S----EGSFTSSSTQQPD-GLVYP  627 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~---~----~~~~v~~~~~spd-g~~l~  627 (894)
                      .-|..    .+..+..-...+..|+|.+++...++|+. |.| +...+.++.=   .    ....+..+.|... .-++.
T Consensus       219 ~~w~~----~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~l  292 (302)
T PF14870_consen  219 ETWSE----PIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVL  292 (302)
T ss_dssp             EEE-------B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE
T ss_pred             ccccc----ccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEE
Confidence            12211    11111122335889999988777776654 543 3445555411   1    1223445555433 33445


Q ss_pred             ecCCeEEE
Q psy10063        628 SQGGHIHS  635 (894)
Q Consensus       628 ~~~g~i~~  635 (894)
                      ..+|.+..
T Consensus       293 G~~G~ll~  300 (302)
T PF14870_consen  293 GQDGVLLR  300 (302)
T ss_dssp             -STTEEEE
T ss_pred             CCCcEEEE
Confidence            55555544

>KOG4499|consensus

Probab=95.67  E-value=2.6  Score=42.55  Aligned_cols=58  Identities=16%  Similarity=0.049  Sum_probs=40.4

Q ss_pred             ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeC--CcEEEEecC
Q psy10063        804 DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD--GKSYASGGE  865 (894)
Q Consensus       804 ~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd--g~~LaS~s~  865 (894)
                      .+++.-+|...++....+    .|+.+|..+|+.+..++-....|++++|---  .-+.+++..
T Consensus       216 Gm~ID~eG~L~Va~~ng~----~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~aa  275 (310)
T KOG4499|consen  216 GMTIDTEGNLYVATFNGG----TVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVTTAA  275 (310)
T ss_pred             cceEccCCcEEEEEecCc----EEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEEehh
Confidence            345555566544444433    5999999999999999988999999999743  234455443

>KOG2444|consensus

Probab=95.57  E-value=0.039  Score=55.06  Aligned_cols=103  Identities=10%  Similarity=-0.022  Sum_probs=71.8

Q ss_pred             CCEEEEecCCCcEEEEEccCCceeec-cccCCC-ceEeec---CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC-
Q psy10063        772 REKLALALADKVSERYRDRKNKATAG-FLLSCP-DFLFDF---DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-  845 (894)
Q Consensus       772 g~~Latgs~Dg~I~iwd~~~~~~~~~-~~~~~~-~~~fS~---dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-  845 (894)
                      +..|++|..+|.|++|.......... +..... ..+.-|   ++.+.+++..++    .||.|+++.++.+.....|. 
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg----~ir~~n~~p~k~~g~~g~h~~  145 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDG----RIRACNIKPNKVLGYVGQHNF  145 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCC----ceeeeccccCceeeeeccccC
Confidence            57889999999999998663222111 111111 111222   444566666665    59999999999998888888 


Q ss_pred             CCeeEEEEeeCCcEEEEe--cCCCcEEEEecCccc
Q psy10063        846 GPINSLAFHPDGKSYASG--GEDGFVRLHTFDQAY  878 (894)
Q Consensus       846 ~~V~~l~fSpdg~~LaS~--s~Dg~V~vWdl~~~~  878 (894)
                      .++..+..+..+++|+++  |.|..++.|+++.-.
T Consensus       146 ~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~  180 (238)
T KOG2444|consen  146 ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK  180 (238)
T ss_pred             CCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence            677778888888888888  888888999886443

>KOG4659|consensus

Probab=95.55  E-value=2.7  Score=51.86  Aligned_cols=31  Identities=19%  Similarity=0.289  Sum_probs=21.5

Q ss_pred             CCcceeeeccCCCCCeeEEEEeeCCcEEEEe
Q psy10063        833 IFEEEFARIKGHFGPINSLAFHPDGKSYASG  863 (894)
Q Consensus       833 ~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~  863 (894)
                      -+++-...-.+|...+.+|+++|||..++.-
T Consensus       649 fs~~~~~At~A~lnsp~alaVsPdg~v~IAD  679 (1899)
T KOG4659|consen  649 FSLRDVAATQAKLNSPYALAVSPDGDVIIAD  679 (1899)
T ss_pred             ccccchhhhccccCCcceEEECCCCcEEEec
Confidence            3344444455788889999999999866543

>KOG2444|consensus

Probab=95.54  E-value=0.014  Score=58.14  Aligned_cols=104  Identities=9%  Similarity=0.022  Sum_probs=65.9

Q ss_pred             CCEEEEEECCCCEEEEEcCC-CcEEEEEeC-CCCeeE-EEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        488 ATMFITASKDHTAKLFTTHD-RQLLKTYTT-ERPVNS-AALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~-~~~~~~~~~-~~~v~~-l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      +..|++|+.+|.|.+|...- |.....+.. ...+.+ |.--.++.+.++++.++.              ||.|.++..+
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~--------------ir~~n~~p~k  135 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGR--------------IRACNIKPNK  135 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCc--------------eeeeccccCc
Confidence            45688999999999998762 222222222 223322 223334456777777776              8888888888


Q ss_pred             eEEEccCCC-CCeEEEEEecCCCEEEEE--eCCCcEEEEECCCC
Q psy10063        565 EFARIKGHF-GPINSLAFHPDGKSYASG--GEDGFLISNTLSNG  605 (894)
Q Consensus       565 ~~~~l~~h~-~~V~~l~~spdg~~l~sg--s~Dg~I~vwdl~~~  605 (894)
                      .+.....|. ..+..+..+..+++|+..  |.|..++.|++...
T Consensus       136 ~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  136 VLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             eeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence            877777776 455555555556666666  66777777776543

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=95.54  E-value=5.6  Score=44.87  Aligned_cols=147  Identities=15%  Similarity=0.182  Sum_probs=80.1

Q ss_pred             CCEEEEecCCCcEEEEecCCCeEE---EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEEEEC
Q psy10063        421 DQYIITGHAKGDICTWDLRMGREL---ESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFITASK  496 (894)
Q Consensus       421 g~~L~sgs~Dg~I~iWd~~tg~~~---~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~sgs~  496 (894)
                      ...|+.|+..|.++||+...++..   ..++..-+.+|..|..-.                     |.+ .....++.-.
T Consensus        37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~---------------------F~s~~~~~~LaVLh   95 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGK---------------------FVSGSEDLQLAVLH   95 (418)
T ss_pred             ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEecc---------------------ccCCCCcceEEEec
Confidence            359999999999999998544311   111111122555554321                     111 1111222233


Q ss_pred             CCCEEEEEcC--CC--------cEEEEEeC--CCCeeEEEEcCCC-----CEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        497 DHTAKLFTTH--DR--------QLLKTYTT--ERPVNSAALSPIL-----PHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       497 Dg~V~iwdl~--~~--------~~~~~~~~--~~~v~~l~~spdg-----~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      -..|.||.+.  .|        ++...++|  ......+++-+-|     .+|++-+.||.              +.+|+
T Consensus        96 P~kl~vY~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~--------------L~~fe  161 (418)
T PF14727_consen   96 PRKLSVYSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGS--------------LSFFE  161 (418)
T ss_pred             CCEEEEEEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCce--------------EEEEe
Confidence            4455555542  11        12222333  3445555554432     46777777776              66666


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      -+.....+.+.+ .--.-.|.|.+.-..|++++.+..|.-|+..
T Consensus       162 qe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~  204 (418)
T PF14727_consen  162 QESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQ  204 (418)
T ss_pred             CCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHH
Confidence            554444444443 2233457788888889999998889888763

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.53  E-value=0.7  Score=48.75  Aligned_cols=89  Identities=15%  Similarity=0.185  Sum_probs=59.2

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEe-cCCCeE-EEEecCCCCC-CeeEEEEcCCCCEEEEEeCC---CCc-------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWD-LRMGRE-LESISGHAKE-PINDMQFSKDATMFITASHS---QAV-------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd-~~tg~~-~~~l~~h~~~-~V~~v~~spdg~~la~~~~d---~~i-------  476 (894)
                      ..+....|++++.+.+....+...+++. ...++. ...+...... .|..+++||||.++|+...+   +.+       
T Consensus        66 ~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r  145 (253)
T PF10647_consen   66 GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVR  145 (253)
T ss_pred             CccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEe
Confidence            4788889999988777776666777774 333432 2222222111 79999999999999877632   222       


Q ss_pred             --------------------cceEEEEEecCCCEEEEEECCC
Q psy10063        477 --------------------EPINDMQFSKDATMFITASKDH  498 (894)
Q Consensus       477 --------------------~~V~~l~~spdg~~L~sgs~Dg  498 (894)
                                          ..+.+++|.+++.+++.+...+
T Consensus       146 ~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  146 DGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG  187 (253)
T ss_pred             CCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence                                3678889998888777665443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.47  E-value=1.7  Score=46.43  Aligned_cols=113  Identities=12%  Similarity=0.119  Sum_probs=65.7

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec---CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE--E
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS---GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ--F  484 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~---~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~--~  484 (894)
                      ..|..|...++-+.|++-+ |+.|+++++..........   ..+. ......+..             .+.+..++  -
T Consensus        36 ~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~v~~f~~~~  100 (275)
T PF00780_consen   36 SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS-RSLPTKLPE-------------TKGVSFFAVNG  100 (275)
T ss_pred             ceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc-ccccccccc-------------cCCeeEEeecc
Confidence            3499999999877777665 4999999987654433110   0000 000000000             01222222  1


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCC----C-cEEEEEeCCCCeeEEEEcCCCCEEEEEECCC
Q psy10063        485 SKDATMFITASKDHTAKLFTTHD----R-QLLKTYTTERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~----~-~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                      ...+...+.+...+.|.||.+..    . +.++.+...+.+.+++|.  +..|+++..++
T Consensus       101 ~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~~~  158 (275)
T PF00780_consen  101 GHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTSKG  158 (275)
T ss_pred             ccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeCCc
Confidence            12333334444556888887764    2 567778888999999999  67888887665

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=95.45  E-value=0.36  Score=54.72  Aligned_cols=113  Identities=10%  Similarity=0.130  Sum_probs=72.3

Q ss_pred             cceEEEEEecC----CCEEEEEECCCCEEEEEcC-----CCcEEEE--EeCCC--C--eeEEEEcCCCCEEEEEECCCCe
Q psy10063        477 EPINDMQFSKD----ATMFITASKDHTAKLFTTH-----DRQLLKT--YTTER--P--VNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       477 ~~V~~l~~spd----g~~L~sgs~Dg~V~iwdl~-----~~~~~~~--~~~~~--~--v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      +.|..+.|.|-    -..|++....+.|.||.+.     ..+++..  .+...  +  ...+.|+|....|++-...+.-
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS  136 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS  136 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence            57899999883    3356667788999999875     3343332  22222  2  3678899999999888777642


Q ss_pred             EEEeccCccceeeEEEEeccc--cceEEEccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIF--EEEFARIKGHFGPINSLAFHPDGKSYASGGE-DGFLISNTLSN  604 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~--~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~  604 (894)
                                    .+++++.  .+....+ .-.+.|.|.+|..||.+|+.+-. .=.-+|||-..
T Consensus       137 --------------V~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  137 --------------VLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             --------------EeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence                          1222221  1222223 35678999999999998776643 33467887544

>KOG2280|consensus

Probab=95.43  E-value=1.3  Score=51.63  Aligned_cols=85  Identities=14%  Similarity=0.124  Sum_probs=56.8

Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc-------CCCceeeeEECcCCcE
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS-------EGSFTSSSTQQPDGLV  625 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~-------~~~~v~~~~~spdg~~  625 (894)
                      +.|+||++. |+.+..+....+.+..+.|+.+. .|++...+|.++||++-......       ....+..+.+...|..
T Consensus        64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa  141 (829)
T KOG2280|consen   64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA  141 (829)
T ss_pred             eeEEEEecc-ccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Confidence            347888865 77777666656689999998765 46777899999999986543211       1223444555557766


Q ss_pred             EEecCCeEEEEecc
Q psy10063        626 YPSQGGHIHSLSSH  639 (894)
Q Consensus       626 l~~~~g~i~~~~~~  639 (894)
                      +...+|.+..+...
T Consensus       142 vlt~~g~v~~i~~~  155 (829)
T KOG2280|consen  142 VLTVSGQVILINGV  155 (829)
T ss_pred             EEecCCcEEEEcCC
Confidence            66666666666543

>KOG2079|consensus

Probab=95.40  E-value=0.042  Score=65.71  Aligned_cols=99  Identities=12%  Similarity=0.108  Sum_probs=74.4

Q ss_pred             CCEEEEEECCCCEEEEEcCCCcE--EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQL--LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE  565 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~  565 (894)
                      +..++.|+..|.|...|+...-.  .+--...++|.+++|+.+|+.++.|-.+|.              |.+||+..++.
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~--------------V~v~D~~~~k~  164 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGH--------------VTVWDMHRAKI  164 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCc--------------EEEEEccCCcc
Confidence            45688888889998888765311  222224689999999999999999999997              89999999999


Q ss_pred             EEEccCCCCCeEEE---EEecCCCEEEEEeCCCcEEEEEC
Q psy10063        566 FARIKGHFGPINSL---AFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       566 ~~~l~~h~~~V~~l---~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      ++.+..|..++.++   .|..++..++++...|.  +|.+
T Consensus       165 l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  165 LKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             eeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            98887777665555   34445666777777675  5654

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=95.31  E-value=3  Score=50.99  Aligned_cols=30  Identities=0%  Similarity=0.005  Sum_probs=24.7

Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCC
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTE  517 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~  517 (894)
                      +..|+.|+.++.|.-.|.++|+.+..+..+
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~  223 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPK  223 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCC
Confidence            556778888899999999999998887753

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PRK10115 protease 2; Provisional

Probab=95.23  E-value=1.8  Score=52.59  Aligned_cols=177  Identities=6%  Similarity=0.030  Sum_probs=91.4

Q ss_pred             CCEEEEEEccCCCEEEEecC-----CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC-c-------
Q psy10063        410 AKITSLLWGNLDQYIITGHA-----KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA-V-------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~-----Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~-i-------  476 (894)
                      -.+..+.|||||++|+.+.+     ...|+|.|+.+|+.+.......  . ..++|++|++.|+....+.. .       
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~  203 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--E-PSFVWANDSWTFYYVRKHPVTLLPYQVWR  203 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--c-eEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence            34777899999998887632     2358899998886432221111  1 45999999998887765421 1       


Q ss_pred             ------------------cceE-EEEEecCCCEEEEEEC---CCCEEEEEc--CCCcEEEEEeCCCCe-eEEEEcCCCCE
Q psy10063        477 ------------------EPIN-DMQFSKDATMFITASK---DHTAKLFTT--HDRQLLKTYTTERPV-NSAALSPILPH  531 (894)
Q Consensus       477 ------------------~~V~-~l~~spdg~~L~sgs~---Dg~V~iwdl--~~~~~~~~~~~~~~v-~~l~~spdg~~  531 (894)
                                        .... .+..+.|+++++..+.   ++.+.+|+.  ..++....+.....+ ..+. .. +..
T Consensus       204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~  281 (686)
T PRK10115        204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HY-QHR  281 (686)
T ss_pred             EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eC-CCE
Confidence                              0111 1222336666554432   346777774  234433333333222 2222 22 234


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEecc-ccceEEEccCC-C-CCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGH-F-GPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h-~-~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      |++....+.          ..+.|...++. .++. ..+..+ . ..|..+.+. .+.++++...+|.-+++-++
T Consensus       282 ly~~tn~~~----------~~~~l~~~~~~~~~~~-~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~  344 (686)
T PRK10115        282 FYLRSNRHG----------KNFGLYRTRVRDEQQW-EELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQIN  344 (686)
T ss_pred             EEEEEcCCC----------CCceEEEecCCCcccC-eEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEc
Confidence            444433221          11223334444 2222 223333 2 367778887 33456666667776555443

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.12  E-value=0.051  Score=40.52  Aligned_cols=32  Identities=22%  Similarity=0.280  Sum_probs=28.9

Q ss_pred             CCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        845 FGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       845 ~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      ...|.+++|+|...+||.+..||.|.||++..
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~   42 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLNW   42 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence            35699999999999999999999999999943

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.07  E-value=0.055  Score=40.34  Aligned_cols=34  Identities=15%  Similarity=0.399  Sum_probs=30.2

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE  443 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~  443 (894)
                      ...|.+++|+|...+||.|..||.|.|+.+ .++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            467999999999999999999999999998 4553

>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others

Probab=95.05  E-value=3.2  Score=53.00  Aligned_cols=134  Identities=14%  Similarity=0.181  Sum_probs=81.0

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEE-------EEeCCC----C
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI-------TASHSQ----A  475 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la-------~~~~d~----~  475 (894)
                      .|...+..|.-+++|++|=.-  |+.|+.||...++..- ........+..+.-.-||+..+       -.+..+    .
T Consensus       360 aH~A~LTgv~~~~~ge~lRlH--d~~LY~~d~~~~~Wk~-~~~~~d~~~S~Ls~qgdG~lYAk~~~~l~nLSs~~~~~~~  436 (1774)
T PF11725_consen  360 AHIAHLTGVHTDPDGEQLRLH--DDRLYQFDPNTARWKP-PPDKSDTPFSSLSRQGDGKLYAKDDDTLVNLSSGQMSEAE  436 (1774)
T ss_pred             HHHHHhhccccCCCCCeEEee--cCceeeeccccceecC-CCCcccchhhhhcccCCCceEecCCCceeecCCCCcchhh
Confidence            466777888888888766554  6788888877654331 1222222445555555666555       111111    1


Q ss_pred             ccceEEEEEecCCCE-EEEEECCCCEEEEEcCCC------cEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        476 VEPINDMQFSKDATM-FITASKDHTAKLFTTHDR------QLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       476 i~~V~~l~~spdg~~-L~sgs~Dg~V~iwdl~~~------~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                      +..|.++...++|.. ++++-....|++|++...      ++...++   +.....+|.++++  +|+++..+|.++.-.
T Consensus       437 v~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~dG~a~A~~VgLs~d--rLFvADseGkLYsa~  514 (1774)
T PF11725_consen  437 VDKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLADGKAQAQSVGLSND--RLFVADSEGKLYSAD  514 (1774)
T ss_pred             hhhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccCCchhhhheeecCC--eEEEEeCCCCEEecc
Confidence            156777888899987 455555556699988643      1222233   2346778888876  789998888755443

It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=94.78  E-value=9.3  Score=46.07  Aligned_cols=131  Identities=13%  Similarity=0.040  Sum_probs=68.3

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCc--EEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGD--ICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~--I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      .+.-+...+..+.|+|+|++++..+.++.  .++|.+..+.   .+..+.. .|....|++++..++..........-..
T Consensus        54 ~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g---~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~~~~~~  129 (620)
T COG1506          54 RLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG---LITKTAF-GVSDARWSPDGDRIAFLTAEGASKRDGG  129 (620)
T ss_pred             cccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecCC---ceeeeec-ccccceeCCCCCeEEEEecccccccCCc
Confidence            35567888999999999999988763332  3444333221   2222333 6788899999999887432221100000


Q ss_pred             EEEecCCCEEEEEE---CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCC
Q psy10063        482 MQFSKDATMFITAS---KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       482 l~~spdg~~L~sgs---~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                      -.+.++.-.+...+   ....+.+.|... +..........+...++..++..++....+.
T Consensus       130 ~~~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (620)
T COG1506         130 DHLFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDD  189 (620)
T ss_pred             eeeeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCCceeEEeeecc
Confidence            00111111111111   223344444444 2222222345677777777777776665544

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=94.64  E-value=7.5  Score=43.03  Aligned_cols=119  Identities=12%  Similarity=0.103  Sum_probs=69.4

Q ss_pred             ceEEEEEe--c-CCC-EEEEEECCCCEEEEEcC---CC----cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        478 PINDMQFS--K-DAT-MFITASKDHTAKLFTTH---DR----QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       478 ~V~~l~~s--p-dg~-~L~sgs~Dg~V~iwdl~---~~----~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                      .++.+|+-  + +|. +++....+|.+..|.+.   .+    ++++.|.....+..|+......+|+++-.+..|+.+..
T Consensus       157 e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~A  236 (381)
T PF02333_consen  157 EPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVGEEDVGIWRYDA  236 (381)
T ss_dssp             SEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEEETTTEEEEEES
T ss_pred             cceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEecCccEEEEEec
Confidence            46666663  3 354 55666788888877664   33    46788888889999999999999999888876322222


Q ss_pred             cCccceeeEEEEeccccceEEEccC--CCCCeEEEEEec--CCC-EEEEEe-CCCcEEEEECCCC
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHP--DGK-SYASGG-EDGFLISNTLSNG  605 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~sp--dg~-~l~sgs-~Dg~I~vwdl~~~  605 (894)
                      +...+.         .++.+....+  ....|..|++-.  +++ ||+..+ .++...||+.+..
T Consensus       237 ep~~~~---------~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  237 EPEGGN---------DRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             SCCC-S-----------EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred             CCCCCC---------cceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            211110         1222322222  456788888753  433 555444 5778999998653

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=94.60  E-value=1.1  Score=53.11  Aligned_cols=112  Identities=11%  Similarity=0.097  Sum_probs=72.4

Q ss_pred             eEEEEEec--CCCEEEEEECCCCEEEEEcCC-------C-------------cEEEEEeCCCCeeEEEEc--CCCCEEEE
Q psy10063        479 INDMQFSK--DATMFITASKDHTAKLFTTHD-------R-------------QLLKTYTTERPVNSAALS--PILPHVVL  534 (894)
Q Consensus       479 V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~-------~-------------~~~~~~~~~~~v~~l~~s--pdg~~l~~  534 (894)
                      |..|....  +.+.|+.|..||.|.+|..+.       .             ++...+..+..+++|+++  ...++||+
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV  182 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV  182 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence            44444333  567899999999999996521       1             122334446788999998  77778888


Q ss_pred             EECCCCeEEEeccCccceeeEEEEeccccc-eEEEccCCCCCeEEEEEecCC---C---EEEEEeCCCcEEEEEC
Q psy10063        535 GGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSLAFHPDG---K---SYASGGEDGFLISNTL  602 (894)
Q Consensus       535 ~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~~V~~l~~spdg---~---~l~sgs~Dg~I~vwdl  602 (894)
                      ++....+.|+.+.            +...+ ....-..|.+-|-+|+|-++.   .   +|++++-.|.+.+|++
T Consensus       183 SsNs~~VTVFaf~------------l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  183 SSNSQEVTVFAFA------------LVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ecCCceEEEEEEe------------ccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            7777766554332            21111 111112366788899997643   2   7888999999988887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.54  E-value=1.1  Score=50.08  Aligned_cols=74  Identities=15%  Similarity=-0.067  Sum_probs=35.3

Q ss_pred             CCeeEEEEcCCCCEEEEEECCCCeEEEecc---Cc--cceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe
Q psy10063        518 RPVNSAALSPILPHVVLGGGQEAREVTTTS---TK--VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       518 ~~v~~l~~spdg~~l~~~~~~~~~~v~~~~---~~--~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs  592 (894)
                      .....++|.|||.+.++.+..+...+-...   ..  ...-.|..++...++......++ .....|+|+++|+++++-.
T Consensus       124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCc-CCCccceECCCCCEEEEcc
Confidence            347789999999766655532211110000   00  00001344444433322222232 3346788888887766543

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=94.53  E-value=3.3  Score=43.28  Aligned_cols=111  Identities=11%  Similarity=0.017  Sum_probs=71.7

Q ss_pred             ceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEeCCCCe--eEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        478 PINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYTTERPV--NSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v--~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      ....+.|..+|.++-+.+.-|  .|+.+|+.+|+.++.......+  ..+++.  +..|+.-.....+            
T Consensus        46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~------------  111 (264)
T PF05096_consen   46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGT------------  111 (264)
T ss_dssp             EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSE------------
T ss_pred             cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCe------------
Confidence            356677777788888877766  6999999999998877754433  334444  3344444443332            


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                       +.+||..+.+.+..+.- .+.=+.|+  .||+.|+.......|+++|.++.+
T Consensus       112 -~f~yd~~tl~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~  160 (264)
T PF05096_consen  112 -GFVYDPNTLKKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFK  160 (264)
T ss_dssp             -EEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-S
T ss_pred             -EEEEccccceEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccc
Confidence             78899998888887753 34557777  467777777667789998876543

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=94.53  E-value=0.45  Score=55.86  Aligned_cols=110  Identities=15%  Similarity=0.122  Sum_probs=68.9

Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEc--CCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALS--PILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~s--pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +.-+.-++..++-+....+.|||.+.+.+.....  ..+.|.++.|.  |+|+.|++.|....+.++.--.         
T Consensus        35 i~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R---------  105 (631)
T PF12234_consen   35 ISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLR---------  105 (631)
T ss_pred             EeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccc---------
Confidence            3333334444444445679999999988665444  47899999984  7899999988888876654321         


Q ss_pred             Eeccc----cceEEE--ccCCC-CCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        558 YHLIF----EEEFAR--IKGHF-GPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       558 wd~~~----~~~~~~--l~~h~-~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      ||...    ...++.  +..|. ++|.+..|.++|.+++.+  +..+.|++-
T Consensus       106 ~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk  155 (631)
T PF12234_consen  106 YDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK  155 (631)
T ss_pred             hhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence            11110    111111  12333 578999999998765544  357888864

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.51  E-value=3.4  Score=50.03  Aligned_cols=94  Identities=14%  Similarity=0.190  Sum_probs=62.8

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCC-CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRM-GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ...|..|.++++|++|+..|..| |.|-.+.. ......|++.+. .|.|-.+.=+..++.+...    ..|..+.|+|.
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~-~i~Crt~~v~~~~~~~~~~----~~i~qv~WhP~  157 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKK-EINCRTVPVDERFFTSNSS----LEIKQVRWHPW  157 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCc-ceeEEEEEechhhccCCCC----ceEEEEEEcCC
Confidence            46799999999999999988765 55555432 222233444443 5555555444444422221    27999999995


Q ss_pred             ---CCEEEEEECCCCEEEEEcCCC
Q psy10063        488 ---ATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       488 ---g~~L~sgs~Dg~V~iwdl~~~  508 (894)
                         +.+|+.=..|+.||+||+...
T Consensus       158 s~~~~~l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  158 SESDSHLVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             CCCCCeEEEEecCCEEEEEecCCC
Confidence               578888889999999999753

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG3630|consensus

Probab=94.38  E-value=0.26  Score=59.58  Aligned_cols=102  Identities=9%  Similarity=0.004  Sum_probs=64.4

Q ss_pred             ceEEEEEecCC-CEEEEEECCCCEEEEEcCCC-cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDA-TMFITASKDHTAKLFTTHDR-QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~-~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      ...++.|.|.- ...+.+..|+.|+|..+... +.+..+.....+.|++|+|.|+.|++|...|.+.-|.....+     
T Consensus       157 f~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~lei-----  231 (1405)
T KOG3630|consen  157 FQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEI-----  231 (1405)
T ss_pred             ccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccce-----
Confidence            45677777732 23556677888888766532 233445566788999999999999999998875333222111     


Q ss_pred             EEEeccccceEEEccC-CCCCeEEEEEecCCCEEEEE
Q psy10063        556 RFYHLIFEEEFARIKG-HFGPINSLAFHPDGKSYASG  591 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~l~sg  591 (894)
                             ...+..... ....|.||+|.....+||+-
T Consensus       232 -------k~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy  261 (1405)
T KOG3630|consen  232 -------KSEIPEPPVEENYRVLSVTWLSTQEFLVVY  261 (1405)
T ss_pred             -------eecccCCCcCCCcceeEEEEecceeEEEEe
Confidence                   111111111 24689999998776666643

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.32  E-value=8.1  Score=46.91  Aligned_cols=91  Identities=10%  Similarity=0.141  Sum_probs=55.7

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCC-CcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHD-RQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .|..|.+++.|.+|+..+..| |.|..+.. ......|.+ ...+.|-.+.                             
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~-----------------------------  135 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVP-----------------------------  135 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEE-----------------------------
Confidence            789999999999999888755 44444421 111112221 1222222221                             


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCC
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~~~  605 (894)
                          +.  ..+. ...+...|..+.|+|.   +.+|+.-..|+.||+||+...
T Consensus       136 ----v~--~~~~-~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  136 ----VD--ERFF-TSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             ----ec--hhhc-cCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence                11  1111 1234567889999986   578999999999999999654

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=94.30  E-value=6.6  Score=42.19  Aligned_cols=171  Identities=12%  Similarity=0.151  Sum_probs=87.4

Q ss_pred             EEEEEEccCCCEEEE--ecC----------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        412 ITSLLWGNLDQYIIT--GHA----------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       412 V~~l~~spdg~~L~s--gs~----------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      |..+...+++++-+.  |..          .-.|.+||+.+++.++++.....  +..    +++             .+
T Consensus         3 V~~v~iD~~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~--~~~----~~s-------------~l   63 (287)
T PF03022_consen    3 VQRVQIDECGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPD--IAP----PDS-------------FL   63 (287)
T ss_dssp             EEEEEE-TTSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CC--CS-----TCG-------------GE
T ss_pred             ccEEEEcCCCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChH--Hcc----ccc-------------cc
Confidence            566666666663332  311          13699999999999888875543  100    111             34


Q ss_pred             EEEEEecC-C----CEEEE-EECCCCEEEEEcCCCcEEEEEeC--------------------CCCeeEEEEcC---CCC
Q psy10063        480 NDMQFSKD-A----TMFIT-ASKDHTAKLFTTHDRQLLKTYTT--------------------ERPVNSAALSP---ILP  530 (894)
Q Consensus       480 ~~l~~spd-g----~~L~s-gs~Dg~V~iwdl~~~~~~~~~~~--------------------~~~v~~l~~sp---dg~  530 (894)
                      ..+.+... +    .+++. -+..+-|.|+|+.+++..+.+.+                    .+.+..++.+|   +|+
T Consensus        64 ndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r  143 (287)
T PF03022_consen   64 NDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGR  143 (287)
T ss_dssp             EEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-
T ss_pred             ceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCcc
Confidence            44554441 1    12222 23335788899988876655432                    22466667765   666


Q ss_pred             EEEEEECCCCeEEEeccCccceeeEEEEecc-ccceEEEccCCC-CCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        531 HVVLGGGQEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGHF-GPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       531 ~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h~-~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      .|+...-.+.. ++....+.-. +-..++.. ..+.++.+ |.. ...-.++++++|.++++--....|..|+...
T Consensus       144 ~LYf~~lss~~-ly~v~T~~L~-~~~~~~~~~~~~~v~~l-G~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~  216 (287)
T PF03022_consen  144 WLYFHPLSSRK-LYRVPTSVLR-DPSLSDAQALASQVQDL-GDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDG  216 (287)
T ss_dssp             EEEEEETT-SE-EEEEEHHHHC-STT--HHH-HHHT-EEE-EE---SECEEEEETTTEEEEEECCCTEEEEEETTT
T ss_pred             EEEEEeCCCCc-EEEEEHHHhh-Cccccccccccccceec-cccCCCCceEEECCCCcEEEecCCCCeEEEEeCCC
Confidence            77776655531 1111100000 00001000 01122222 222 3556788899998888888899999999886

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>KOG1916|consensus

Probab=94.27  E-value=0.068  Score=62.63  Aligned_cols=172  Identities=10%  Similarity=0.016  Sum_probs=92.6

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      .++|..+.|-.|+|.. +-..++  -.-|.+.|||++  .|+....|..|..        .|-|.++         ..|.
T Consensus       127 l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~--------~p~gs~~---------~~V~  187 (1283)
T KOG1916|consen  127 LAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPI--------TPYGSDP---------QLVS  187 (1283)
T ss_pred             HHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeec--------CcCCCCc---------ceee
Confidence            4567778888888854 111222  233678899875  3444333322211        1111110         0222


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCC--cEEEEEeCCCCe-----------eEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDR--QLLKTYTTERPV-----------NSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~--~~~~~~~~~~~v-----------~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                      .+-|.+..-+++.+-.++.|++..+...  ++++.  |..++           .--.+||||..|+.+..||.+..    
T Consensus       188 wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rs--Hs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f----  261 (1283)
T KOG1916|consen  188 WCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRS--HSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGF----  261 (1283)
T ss_pred             ecccccccceeeeccCCCceeEeeechHHHHHHHh--cCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccce----
Confidence            2223345566777777888887665432  22222  22222           22237899999999998887543    


Q ss_pred             CccceeeEEEEeccccceEEEccCCC-CCeEEEEEecCC---------CEEEEEeC-CCcEEEEECCCC
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKGHF-GPINSLAFHPDG---------KSYASGGE-DGFLISNTLSNG  605 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~h~-~~V~~l~~spdg---------~~l~sgs~-Dg~I~vwdl~~~  605 (894)
                           |.|+|.+...-++++..+.|. ++-.|.-|+...         .+++++.. ...+++|.-..-
T Consensus       262 -----~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w  325 (1283)
T KOG1916|consen  262 -----YQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPW  325 (1283)
T ss_pred             -----eeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccch
Confidence                 467777777777777777777 333343344321         13344433 345788865443

>KOG4659|consensus

Probab=94.25  E-value=20  Score=44.86  Aligned_cols=28  Identities=4%  Similarity=0.166  Sum_probs=20.1

Q ss_pred             eecCCCCceEEEeeCCCCCEEEEecCCC
Q psy10063        755 ILAGPVDIGFKMPEPPKREKLALALADK  782 (894)
Q Consensus       755 ~~~~h~~~v~~la~spdg~~Latgs~Dg  782 (894)
                      ..+.|-....++|++|||..++.-...-
T Consensus       656 At~A~lnsp~alaVsPdg~v~IAD~gN~  683 (1899)
T KOG4659|consen  656 ATQAKLNSPYALAVSPDGDVIIADSGNS  683 (1899)
T ss_pred             hhccccCCcceEEECCCCcEEEecCCch
Confidence            3455667788999999998877654443

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=94.22  E-value=13  Score=42.50  Aligned_cols=52  Identities=12%  Similarity=0.130  Sum_probs=35.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE--EEE----Ee--CCCCeeEEEEcCCC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL--LKT----YT--TERPVNSAALSPIL  529 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~----~~--~~~~v~~l~~spdg  529 (894)
                      .-+.|+|.|||++|++--..|.|++++...+..  +..    +.  .++.+..|+|+|+-
T Consensus        31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            578888889887776654468898887655432  111    11  35778999999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=94.19  E-value=1.7  Score=47.70  Aligned_cols=118  Identities=11%  Similarity=0.190  Sum_probs=68.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCc------EEEEecCCC-eEEEEecCCCCCCeeEEEE----cCCCCEEEEEeCCCCc
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGD------ICTWDLRMG-RELESISGHAKEPINDMQF----SKDATMFITASHSQAV  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~------I~iWd~~tg-~~~~~l~~h~~~~V~~v~~----spdg~~la~~~~d~~i  476 (894)
                      .-+.+++|.|.+++..++..+++|.      +..+++... ..+.        .|.....    .++|.-+.....    
T Consensus        18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~L~~~~G~~~~~~~~----   85 (326)
T PF13449_consen   18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIG--------GVTILDMIPLRDPDGQPFPKNGL----   85 (326)
T ss_pred             ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCcc--------ceEeccceeccCCCCCcCCcCCC----
Confidence            3477899999976666666667776      555554430 0000        1111000    122322211111    


Q ss_pred             cceEEEEEecCCCEEEEEECC------CCEEEEEcCCCcEEEEEe----------------CCCCeeEEEEcCCCCEEEE
Q psy10063        477 EPINDMQFSKDATMFITASKD------HTAKLFTTHDRQLLKTYT----------------TERPVNSAALSPILPHVVL  534 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~D------g~V~iwdl~~~~~~~~~~----------------~~~~v~~l~~spdg~~l~~  534 (894)
                       ..-+|++.++|.++++.-.+      ..|+.++.. |+.+..+.                ....+.+|+++|+|+.|++
T Consensus        86 -D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~  163 (326)
T PF13449_consen   86 -DPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFA  163 (326)
T ss_pred             -ChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEE
Confidence             34567777788877776666      678777766 66554441                1246899999999998877


Q ss_pred             EECCC
Q psy10063        535 GGGQE  539 (894)
Q Consensus       535 ~~~~~  539 (894)
                      +....
T Consensus       164 ~~E~~  168 (326)
T PF13449_consen  164 AMESP  168 (326)
T ss_pred             EECcc
Confidence            76544

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.08  E-value=2.4  Score=42.57  Aligned_cols=115  Identities=12%  Similarity=0.227  Sum_probs=65.9

Q ss_pred             CEEEEecCCCcEEEEecCC--CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE----EEecCCCEEEEEE
Q psy10063        422 QYIITGHAKGDICTWDLRM--GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM----QFSKDATMFITAS  495 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~t--g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l----~~spdg~~L~sgs  495 (894)
                      +.|+.+...+.|.+|++..  .+.+..|..- + .|..+.++..|.||++.-.+.....+..+    -|-..      ..
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~-~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~------~~  100 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-G-RVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQ------KE  100 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-h-heeEEEeccccceEEEEEeecCCccceEEEEEEEhhhh------cc
Confidence            4555545567899999983  3456666644 3 79999999999999988776655422211    12110      01


Q ss_pred             CCCCEEEEEcC----------CCcEEEE--EeCCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        496 KDHTAKLFTTH----------DRQLLKT--YTTERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       496 ~Dg~V~iwdl~----------~~~~~~~--~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                      ....+++--+.          .+..+..  +.....+.+++-+|-...|++|+.+. +.+|.
T Consensus       101 ~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~-l~lf~  161 (215)
T PF14761_consen  101 ENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNK-LVLFT  161 (215)
T ss_pred             cCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCE-EEEEE
Confidence            11111111000          0122333  33467889999999877788877655 33443

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=94.01  E-value=7.9  Score=40.98  Aligned_cols=52  Identities=19%  Similarity=0.291  Sum_probs=38.2

Q ss_pred             EEEEeccccceEEEcc--CCCCCeEEEEEec------CCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        555 ARFYHLIFEEEFARIK--GHFGPINSLAFHP------DGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~--~h~~~V~~l~~sp------dg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                      |.++|.. |..++++.  +.-..-+.|+..|      .|.+|+---.||+|..||..+++.
T Consensus       224 VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~  283 (336)
T TIGR03118       224 VNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQ  283 (336)
T ss_pred             EEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCce
Confidence            7888876 77787773  3445667888766      356677666799999999887653

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG1983|consensus

Probab=93.82  E-value=5.6  Score=50.21  Aligned_cols=42  Identities=21%  Similarity=0.147  Sum_probs=29.9

Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063        582 HPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDG  623 (894)
Q Consensus       582 spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg  623 (894)
                      ..++..++++..||.+.+||...+..+.....+....+.+.+
T Consensus       243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~~~~~~~~~~~~~~~~~  284 (993)
T KOG1983|consen  243 SRDGSHFVSYHTDGSYAFWDVSSGKLQIARNPVPLVSLVPYG  284 (993)
T ss_pred             ccCCceEEEEEecCCEEeeecCCCceeecCccccccccCCCC
Confidence            778999999999999999999987654333333333444433

>KOG1898|consensus

Probab=93.79  E-value=22  Score=43.66  Aligned_cols=84  Identities=13%  Similarity=0.004  Sum_probs=49.4

Q ss_pred             CCcEEEEEccC-Cc---eeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc--CCCCCeeEEEEe
Q psy10063        781 DKVSERYRDRK-NK---ATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFH  854 (894)
Q Consensus       781 Dg~I~iwd~~~-~~---~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~--gH~~~V~~l~fS  854 (894)
                      +|.++.|++-. ++   .+........-.++.+-..+++++.+.     .+++||+...+++++.+  .-...|..++|-
T Consensus       911 ~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~~~LagvG~-----~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~  985 (1205)
T KOG1898|consen  911 SGFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQGRVLAGVGR-----FLRLYDLGKKKLLRKCELKFIPNRISSIQTY  985 (1205)
T ss_pred             CCceEEEEEEecCceeeeeeccCCCccceEEeccCCEEEEeccc-----EEEEeeCChHHHHhhhhhccCceEEEEEeec
Confidence            44577776432 22   234444455566788877788888777     49999998777765543  223445555553


Q ss_pred             eCCcEEEEecCCCcEEE
Q psy10063        855 PDGKSYASGGEDGFVRL  871 (894)
Q Consensus       855 pdg~~LaS~s~Dg~V~v  871 (894)
                        +.+|+.|..--.|.+
T Consensus       986 --~~RI~VgD~qeSV~~ 1000 (1205)
T KOG1898|consen  986 --GARIVVGDIQESVHF 1000 (1205)
T ss_pred             --ceEEEEeeccceEEE
Confidence              444555544333433

>PHA02713 hypothetical protein; Provisional

Probab=93.79  E-value=0.83  Score=54.13  Aligned_cols=50  Identities=4%  Similarity=-0.061  Sum_probs=29.5

Q ss_pred             EEEEeccc-cce--EEEccCCCCCeEEEEEecCCCEEEEEeCCC--cEEEEECCCCc
Q psy10063        555 ARFYHLIF-EEE--FARIKGHFGPINSLAFHPDGKSYASGGEDG--FLISNTLSNGL  606 (894)
Q Consensus       555 v~vwd~~~-~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg--~I~vwdl~~~~  606 (894)
                      +..||... .+.  +..+.........+++  +|++.+.|+.||  .+..||..+.+
T Consensus       482 ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        482 IFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             EEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccccc
Confidence            56777775 333  3334333333333333  788888999888  56667766543

>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others

Probab=93.42  E-value=15  Score=47.37  Aligned_cols=14  Identities=14%  Similarity=0.245  Sum_probs=10.1

Q ss_pred             EecCCCcEEEEEcc
Q psy10063        777 LALADKVSERYRDR  790 (894)
Q Consensus       777 tgs~Dg~I~iwd~~  790 (894)
                      +|-.||.|..||..
T Consensus       618 v~L~~G~i~~wD~t  631 (1774)
T PF11725_consen  618 VGLQDGKIQYWDST  631 (1774)
T ss_pred             eeeccceEeeecCc
Confidence            45567899999843

It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].

>PHA02713 hypothetical protein; Provisional

Probab=93.36  E-value=9.6  Score=45.26  Aligned_cols=54  Identities=6%  Similarity=0.015  Sum_probs=35.3

Q ss_pred             EEEeecCC-c--ceeeeccCCCCCeeEEEEeeCCcEEEEecCCC--cEEEEecCccccccc
Q psy10063        827 ARFYHLIF-E--EEFARIKGHFGPINSLAFHPDGKSYASGGEDG--FVRLHTFDQAYFDYT  882 (894)
Q Consensus       827 I~vwd~~t-g--~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg--~V~vWdl~~~~~~~~  882 (894)
                      |..||..+ .  ..+..+..+......+.+  +|++.+.||.||  .|..||..+.++...
T Consensus       482 ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~  540 (557)
T PHA02713        482 IFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI  540 (557)
T ss_pred             EEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence            67899886 3  334444433333333333  789999999998  777888877766543

>PRK13684 Ycf48-like protein; Provisional

Probab=93.08  E-value=17  Score=40.13  Aligned_cols=111  Identities=17%  Similarity=0.134  Sum_probs=60.3

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCC-CcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHD-RQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      ..+.++.+.+++.+++++ ..|.+.. ..+. ++....+..  ...+.++.+.++++.++++. .+.+            
T Consensus       173 g~~~~i~~~~~g~~v~~g-~~G~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~------------  237 (334)
T PRK13684        173 GVVRNLRRSPDGKYVAVS-SRGNFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQI------------  237 (334)
T ss_pred             ceEEEEEECCCCeEEEEe-CCceEEE-EcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEE------------
Confidence            468889999988766555 4554432 2222 333333332  46789999999998776654 4432            


Q ss_pred             eEEEEeccccceEEEccC----CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        554 DARFYHLIFEEEFARIKG----HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~----h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                        ++-....|..-..+..    -...+..+.|.+++..++ ++.+|.|. ...+.++
T Consensus       238 --~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~  290 (334)
T PRK13684        238 --RFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGK  290 (334)
T ss_pred             --EEccCCCCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCC
Confidence              1111111211111111    123577888988877554 45567554 3444443

>KOG4499|consensus

Probab=92.98  E-value=3.5  Score=41.62  Aligned_cols=90  Identities=14%  Similarity=0.062  Sum_probs=55.2

Q ss_pred             EEEEEecCCCEEE-EEECCCCEEEEE--cCCCcE-----EEEEeC----C-CCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        480 NDMQFSKDATMFI-TASKDHTAKLFT--THDRQL-----LKTYTT----E-RPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       480 ~~l~~spdg~~L~-sgs~Dg~V~iwd--l~~~~~-----~~~~~~----~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                      ..|+|+.|.+.+. .-+.+-.|.-||  ..+|.+     +..++.    + ...-.+++..+|.+.++....+.      
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~------  234 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGT------  234 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcE------
Confidence            4566776655444 345566676676  444433     222221    1 11233444555655554444443      


Q ss_pred             cCccceeeEEEEeccccceEEEccCCCCCeEEEEEec
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  583 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp  583 (894)
                              |...|..+|+.+..++-....|.|++|-.
T Consensus       235 --------V~~~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  235 --------VQKVDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             --------EEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence                    78889999999999988899999999964

>KOG4460|consensus

Probab=92.86  E-value=1.7  Score=48.53  Aligned_cols=138  Identities=9%  Similarity=0.097  Sum_probs=75.8

Q ss_pred             EEEecCCCcEEEEecCCCeE-EEEecCCCCCCeeEEE------EcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC
Q psy10063        424 IITGHAKGDICTWDLRMGRE-LESISGHAKEPINDMQ------FSKDATMFITASHSQAVEPINDMQFSKDATMFITASK  496 (894)
Q Consensus       424 L~sgs~Dg~I~iWd~~tg~~-~~~l~~h~~~~V~~v~------~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~  496 (894)
                      ++.+..| .+..||-+..-+ +..+++..+ +-...+      +-|+....+         .|..|..++.|..++..+.
T Consensus        55 ~~~~~gD-~lf~Wd~~ds~Llv~~lR~~~~-~~~~~a~~q~q~l~P~~~V~f---------eV~~vl~s~~GS~VaL~G~  123 (741)
T KOG4460|consen   55 VVFGLGD-ELFLWDGEDSSLLVVRLRGPSG-GGEEPALSQYQRLLPINPVLF---------EVYQVLLSPTGSHVALIGI  123 (741)
T ss_pred             hhcccCC-EEEEEecCcceEEEEEeccCCC-CcccccccccceeccCCcceE---------EEEEEEecCCCceEEEecC
Confidence            4445455 788998765433 333443222 111111      223332222         6888999999999999998


Q ss_pred             CCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC
Q psy10063        497 DHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP  575 (894)
Q Consensus       497 Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~  575 (894)
                      +|.+.++=.+....-..|+.+ ..|.|-.|.-+. .|+..                                   ...-.
T Consensus       124 ~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~-~~fts-----------------------------------s~~lt  167 (741)
T KOG4460|consen  124 KGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAE-RFFTS-----------------------------------STSLT  167 (741)
T ss_pred             CeeEEEEchhhcCccceecCCCceEEEEeecccc-eeecc-----------------------------------CCcee
Confidence            987655432222222223221 223333333221 11111                                   11224


Q ss_pred             eEEEEEecCC---CEEEEEeCCCcEEEEECCCCccc
Q psy10063        576 INSLAFHPDG---KSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       576 V~~l~~spdg---~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      +..++|+|+.   ..|+.-..|..||+|++.....+
T Consensus       168 l~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  168 LKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             eeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence            5677888864   57888888999999999876644

>PHA03098 kelch-like protein; Provisional

Probab=92.85  E-value=2.3  Score=50.29  Aligned_cols=54  Identities=6%  Similarity=-0.061  Sum_probs=28.8

Q ss_pred             cCCCEEEEecCCC------cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        419 NLDQYIITGHAKG------DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       419 pdg~~L~sgs~Dg------~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .++.+++.||.++      .+.+||..+.+....-.-... .....+..-+++.++.||.+
T Consensus       293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~-R~~~~~~~~~~~lyv~GG~~  352 (534)
T PHA03098        293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYP-RKNPGVTVFNNRIYVIGGIY  352 (534)
T ss_pred             ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcc-cccceEEEECCEEEEEeCCC
Confidence            4566777776542      577888887765332111111 11122223367777777765

>KOG4441|consensus

Probab=92.48  E-value=4.9  Score=47.73  Aligned_cols=178  Identities=9%  Similarity=0.047  Sum_probs=91.5

Q ss_pred             CCCEEEEecCCC------cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC-CCc--cce-----------
Q psy10063        420 LDQYIITGHAKG------DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS-QAV--EPI-----------  479 (894)
Q Consensus       420 dg~~L~sgs~Dg------~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d-~~i--~~V-----------  479 (894)
                      .+.+++.||.++      .|..+|..+++......-.......++++. ++...++||.+ +..  ..|           
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~  362 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT  362 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence            455777777763      588888887755433332222123333333 45778888888 433  100           


Q ss_pred             ---------EEEEE-ecCCCEEEEEECCCC-----EEEEEcCCCcEEEEEeCCCCeeEEEE-cCCCCEEEEEECCCCeEE
Q psy10063        480 ---------NDMQF-SKDATMFITASKDHT-----AKLFTTHDRQLLKTYTTERPVNSAAL-SPILPHVVLGGGQEAREV  543 (894)
Q Consensus       480 ---------~~l~~-spdg~~L~sgs~Dg~-----V~iwdl~~~~~~~~~~~~~~v~~l~~-spdg~~l~~~~~~~~~~v  543 (894)
                               ..++. .-+|.+.|+|+.||.     |..||.+..+....-.......+.+. .-+|+..++||.++... 
T Consensus       363 ~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~-  441 (571)
T KOG4441|consen  363 PVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSN-  441 (571)
T ss_pred             ccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCcc-
Confidence                     00111 114667788888864     77777776554333222222222222 23455666666565431 


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc-----EEEEECCCCc
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF-----LISNTLSNGL  606 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~-----I~vwdl~~~~  606 (894)
                             ..-.+..||..+.+....-..-......-+-.-++.+++.||.|+.     |..||....+
T Consensus       442 -------~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~  502 (571)
T KOG4441|consen  442 -------CLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQ  502 (571)
T ss_pred             -------ccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCc
Confidence                   1113778887776554332211111111122236777888887763     5667765543

>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]

Probab=92.38  E-value=14  Score=37.82  Aligned_cols=118  Identities=11%  Similarity=0.200  Sum_probs=58.8

Q ss_pred             ccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC--------------------------CCCeeEEEEcCCCCEEEEEe
Q psy10063        418 GNLDQYIITGHAKGDICTWDLRMGRELESISGHA--------------------------KEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       418 spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~--------------------------~~~V~~v~~spdg~~la~~~  471 (894)
                      .|+...|++....+-++|||+. |++++.+...+                          ...|...++.|+.++|-+..
T Consensus        64 ~P~kS~vItt~Kk~Gl~VYDLs-GkqLqs~~~Gk~NNVDLrygF~LgG~~idiaaASdR~~~~i~~y~Idp~~~~L~sit  142 (364)
T COG4247          64 NPDKSLVITTVKKAGLRVYDLS-GKQLQSVNPGKYNNVDLRYGFQLGGQSIDIAAASDRQNDKIVFYKIDPNPQYLESIT  142 (364)
T ss_pred             CcCcceEEEeeccCCeEEEecC-CCeeeecCCCcccccccccCcccCCeEEEEEecccccCCeEEEEEeCCCccceeecc
Confidence            4555566666566667777765 44333332111                          01333444455555555444


Q ss_pred             CCCCc-----cceEEEEEecC---CC-EEEEEECCCCEEEEEcCC-------CcEEEEEeCCCCeeEEEEcCCCCEEEEE
Q psy10063        472 HSQAV-----EPINDMQFSKD---AT-MFITASKDHTAKLFTTHD-------RQLLKTYTTERPVNSAALSPILPHVVLG  535 (894)
Q Consensus       472 ~d~~i-----~~V~~l~~spd---g~-~L~sgs~Dg~V~iwdl~~-------~~~~~~~~~~~~v~~l~~spdg~~l~~~  535 (894)
                      +....     ..++.+++..+   |. ++++...+|.|+-|.+-.       ++.++.|+....-..|.....-..|+++
T Consensus       143 D~n~p~ss~~s~~YGl~lyrs~ktgd~yvfV~~~qG~~~Qy~l~d~gnGkv~~k~vR~fk~~tQTEG~VaDdEtG~LYIa  222 (364)
T COG4247         143 DSNAPYSSSSSSAYGLALYRSPKTGDYYVFVNRRQGDIAQYKLIDQGNGKVGTKLVRQFKIPTQTEGMVADDETGFLYIA  222 (364)
T ss_pred             CCCCccccCcccceeeEEEecCCcCcEEEEEecCCCceeEEEEEecCCceEcceeeEeeecCCcccceeeccccceEEEe
Confidence            33221     45666666543   33 455566778888876642       2455666654433333333333344444


Q ss_pred             E
Q psy10063        536 G  536 (894)
Q Consensus       536 ~  536 (894)
                      -
T Consensus       223 e  223 (364)
T COG4247         223 E  223 (364)
T ss_pred             e
Confidence            3

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=92.30  E-value=15  Score=40.38  Aligned_cols=35  Identities=17%  Similarity=0.236  Sum_probs=26.5

Q ss_pred             EEEEEEccCCCEEEEecCC------CcEEEEecCCCeEEEEe
Q psy10063        412 ITSLLWGNLDQYIITGHAK------GDICTWDLRMGRELESI  447 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~D------g~I~iWd~~tg~~~~~l  447 (894)
                      .-+|++.++|.++++.-.+      ..|+.++.. |+.+..+
T Consensus        87 ~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~  127 (326)
T PF13449_consen   87 PEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRF  127 (326)
T ss_pred             hhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceE
Confidence            3478887888888888777      788888876 7765555

>PHA02790 Kelch-like protein; Provisional

Probab=91.76  E-value=4.7  Score=46.95  Aligned_cols=54  Identities=2%  Similarity=-0.007  Sum_probs=27.4

Q ss_pred             CCCEEEEecCCC-----cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        420 LDQYIITGHAKG-----DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       420 dg~~L~sgs~Dg-----~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      ++.+++.||.++     .+..||....+....-.-... ........-++...+.||.++
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~-r~~~~~v~~~~~iYviGG~~~  329 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSP-RLYASGVPANNKLYVVGGLPN  329 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCch-hhcceEEEECCEEEEECCcCC
Confidence            455667776543     467788877664332211111 111112234667777777543

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=91.62  E-value=3.5  Score=47.18  Aligned_cols=31  Identities=19%  Similarity=0.158  Sum_probs=25.2

Q ss_pred             CCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        574 GPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       574 ~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      ..|.+|++.+..+.|++...+|.|.+|++..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            4499999999889999999999999999964

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=91.61  E-value=13  Score=43.12  Aligned_cols=163  Identities=10%  Similarity=0.008  Sum_probs=71.0

Q ss_pred             EEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC--CCeeEEEEcCCCCEEEEE
Q psy10063        393 LATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK--EPINDMQFSKDATMFITA  470 (894)
Q Consensus       393 l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~--~~V~~v~~spdg~~la~~  470 (894)
                      ++....+.++..+.........+.+-++|.+|+..+  ..++.+|+. |+.+..+.....  ..=..+.+.|+|.+|+.+
T Consensus       131 ~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~  207 (477)
T PF05935_consen  131 YLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNLLILA  207 (477)
T ss_dssp             EEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-EEEEE
T ss_pred             EEECCCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCEEEEE
Confidence            334444555554443332222266778898887665  679999986 776555442211  001246677888888877


Q ss_pred             eCCCCccceEEEEEecCCCEEEEEECCC-CEEEEEcCCCcEEEEE--------e-------CC--CCeeEEEEcCCCCEE
Q psy10063        471 SHSQAVEPINDMQFSKDATMFITASKDH-TAKLFTTHDRQLLKTY--------T-------TE--RPVNSAALSPILPHV  532 (894)
Q Consensus       471 ~~d~~i~~V~~l~~spdg~~L~sgs~Dg-~V~iwdl~~~~~~~~~--------~-------~~--~~v~~l~~spdg~~l  532 (894)
                      ...............  +..|+-...+| .|..||+.+---....        .       ..  -.+.++.+.+....|
T Consensus       208 ~~~~~~~~~~~~~~~--~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~i  285 (477)
T PF05935_consen  208 SETKYVDEDKDVDTV--EDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSI  285 (477)
T ss_dssp             EETTEE-TS-EE-----S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEE
T ss_pred             eecccccCCCCccEe--cCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeE
Confidence            632211110111111  12233332333 3567776542110111        0       01  147899999966666


Q ss_pred             EEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCC
Q psy10063        533 VLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF  573 (894)
Q Consensus       533 ~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~  573 (894)
                      ++.+.....             |...|.++++..-.+..|.
T Consensus       286 ivSsR~~s~-------------V~~Id~~t~~i~Wilg~~~  313 (477)
T PF05935_consen  286 IVSSRHQSA-------------VIKIDYRTGKIKWILGPPG  313 (477)
T ss_dssp             EEEETTT-E-------------EEEEE-TTS-EEEEES-ST
T ss_pred             EEEcCcceE-------------EEEEECCCCcEEEEeCCCC
Confidence            666655432             5555666666665555443

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=91.60  E-value=14  Score=41.55  Aligned_cols=104  Identities=14%  Similarity=0.166  Sum_probs=56.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-----EEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL-----LKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-----~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                      .+..+.|.+++.+++++ .+|.| +|....++.     +..+..   ...+.++.|..++..+ +++..|.+.       
T Consensus       282 ~l~~v~~~~dg~l~l~g-~~G~l-~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~-a~G~~G~v~-------  351 (398)
T PLN00033        282 RIQNMGWRADGGLWLLT-RGGGL-YVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAW-AAGGSGILL-------  351 (398)
T ss_pred             ceeeeeEcCCCCEEEEe-CCceE-EEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEE-EEECCCcEE-------
Confidence            46677777777766554 44543 334444432     222222   2348889999876654 455555421       


Q ss_pred             cceeeEEEEeccccceEEEcc---CCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063        550 VGKFDARFYHLIFEEEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFLISN  600 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw  600 (894)
                              .....|+.-....   .-...++.+.|..+++.++. +.+|.|..|
T Consensus       352 --------~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~il~~  396 (398)
T PLN00033        352 --------RSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGVLLRY  396 (398)
T ss_pred             --------EeCCCCcceeEccccCCCCcceeEEEEcCCCceEEE-eCCcEEEEe
Confidence                    1122233222222   23456789999877665555 456776655

>KOG2247|consensus

Probab=91.51  E-value=0.058  Score=59.32  Aligned_cols=113  Identities=8%  Similarity=0.024  Sum_probs=73.2

Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      ....|-+.+.-|+.++.+-.|..||-. ++.+..+...+....++|..+|..+++......-             +.+||
T Consensus        38 i~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~tg~aldm~wDkegdvlavlAek~~p-------------iylwd  103 (615)
T KOG2247|consen   38 IIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELNPTGKALDMAWDKEGDVLAVLAEKTGP-------------IYLWD  103 (615)
T ss_pred             ceeeEecCCCceehhhhhhHHHhhhhh-cceecccCCchhHhhhhhccccchhhhhhhcCCC-------------eeech
Confidence            345677766668888888888899843 5555555556677788999888877765544331             77888


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +.+......-.+-...-.-+.|++.+..++.+-..|.++|+.....+
T Consensus       104 ~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR  150 (615)
T KOG2247|consen  104 VNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSR  150 (615)
T ss_pred             hhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchh
Confidence            76443221111111111226788888888888888888888765443

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=91.46  E-value=0.64  Score=33.69  Aligned_cols=32  Identities=9%  Similarity=0.128  Sum_probs=27.1

Q ss_pred             CCEEEEEEccCC---CEEEEecCCCcEEEEecCCC
Q psy10063        410 AKITSLLWGNLD---QYIITGHAKGDICTWDLRMG  441 (894)
Q Consensus       410 ~~V~~l~~spdg---~~L~sgs~Dg~I~iWd~~tg  441 (894)
                      +.|+++.|||..   ++|+.+..-|.|.|+|++++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            578999999844   59999988899999999853

It contains a characteristic DLL sequence motif.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=91.44  E-value=4.1  Score=37.70  Aligned_cols=108  Identities=8%  Similarity=0.050  Sum_probs=67.3

Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCC--------CcEEEEEeCCCCeeEEEEcC-----CCCEEEEEECCCCeEEEeccCc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHD--------RQLLKTYTTERPVNSAALSP-----ILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~--------~~~~~~~~~~~~v~~l~~sp-----dg~~l~~~~~~~~~~v~~~~~~  549 (894)
                      +|......|+.+..-|.|.|++...        ...++.+.....|.+|+-.+     +...|++|+...          
T Consensus         5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~----------   74 (136)
T PF14781_consen    5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTS----------   74 (136)
T ss_pred             EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccce----------
Confidence            3444445677778888888887653        23456666677788876543     345666666655          


Q ss_pred             cceeeEEEEeccccceEEEccCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCCc
Q psy10063        550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                           |..||+.....+.. +.-...|.++.+-.-   ..-|+..+....|.-||.+..+
T Consensus        75 -----llaYDV~~N~d~Fy-ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e  128 (136)
T PF14781_consen   75 -----LLAYDVENNSDLFY-KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNE  128 (136)
T ss_pred             -----EEEEEcccCchhhh-hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcE
Confidence                 78888876655543 233456777776431   2235555556777777776544

>PRK13615 lipoprotein LpqB; Provisional

Probab=91.22  E-value=21  Score=41.88  Aligned_cols=155  Identities=7%  Similarity=-0.064  Sum_probs=80.3

Q ss_pred             EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE
Q psy10063        413 TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI  492 (894)
Q Consensus       413 ~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~  492 (894)
                      .+++.+++++.++....++.+++|... +.....+.++   .+..-.|.++| ++-+.....             ..+|+
T Consensus       337 ~s~avS~dg~~~A~v~~~~~l~vg~~~-~~~~~~~~~~---~Lt~PS~d~~g-~vWtv~~g~-------------~~~l~  398 (557)
T PRK13615        337 DAATLSADGRQAAVRNASGVWSVGDGD-RDAVLLDTRP---GLVAPSLDAQG-YVWSTPASD-------------PRGLV  398 (557)
T ss_pred             ccceEcCCCceEEEEcCCceEEEecCC-CcceeeccCC---ccccCcCcCCC-CEEEEeCCC-------------ceEEE
Confidence            788999999999888878888888765 2322223322   24444455544 221111100             11111


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC---CCCeEEEeccCccceeeEEEEecccc--ceE-
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG---QEAREVTTTSTKVGKFDARFYHLIFE--EEF-  566 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~---~~~~~v~~~~~~~~~~~v~vwd~~~~--~~~-  566 (894)
                      ....+|....-.+       ....+..|..+.+|+||-++++...   .+.+.+-.+           -. ..+  ..+ 
T Consensus       399 ~~~~~G~~~~v~v-------~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V-----------~R-~~~~P~~L~  459 (557)
T PRK13615        399 AWGPDGVGHPVAV-------SWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASI-----------VR-DGGVPTSLT  459 (557)
T ss_pred             EecCCCceEEeec-------cccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEE-----------Ee-CCCcceEee
Confidence            1112222211111       0112467999999999999887643   233333211           11 122  122 


Q ss_pred             ---EEccCCCCCeEEEEEecCCCEEEEEe---CCCcEEEEECCC
Q psy10063        567 ---ARIKGHFGPINSLAFHPDGKSYASGG---EDGFLISNTLSN  604 (894)
Q Consensus       567 ---~~l~~h~~~V~~l~~spdg~~l~sgs---~Dg~I~vwdl~~  604 (894)
                         ..+......+.+++|..++.+++.+.   .+..+++..+..
T Consensus       460 ~~p~~l~~~l~~v~sl~W~~~~~laVl~~~~~~~~~v~~v~v~g  503 (557)
T PRK13615        460 TTPLELLASPGTPLDATWVDELDVATLTLAPDGERQVELHQVGG  503 (557)
T ss_pred             eccEEcccCcCcceeeEEcCCCEEEEEeccCCCCceEEEEECCC
Confidence               22222234889999999888766552   234566666653

>KOG4441|consensus

Probab=91.17  E-value=5.2  Score=47.49  Aligned_cols=173  Identities=13%  Similarity=0.099  Sum_probs=90.1

Q ss_pred             CCCEEEEecCC-C-----cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------------
Q psy10063        420 LDQYIITGHAK-G-----DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----------------  476 (894)
Q Consensus       420 dg~~L~sgs~D-g-----~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----------------  476 (894)
                      .+.+.++||.| |     .+.+||....+....-.-... +...-.-.-+|...|+||.++..                 
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~-R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~  410 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTK-RSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP  410 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCc-cccceeEEECCEEEEEeccccccccccEEEecCCCCcccc
Confidence            45677888888 3     477888877765432111111 11111222367888899888755                 


Q ss_pred             -----cceEEEEE-ecCCCEEEEEECCC------CEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063        477 -----EPINDMQF-SKDATMFITASKDH------TAKLFTTHDRQLLKTYTTE--RPVNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       477 -----~~V~~l~~-spdg~~L~sgs~Dg------~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                           ....+.+. .-+|++.++|+.++      .|..||..+.+....-...  ..-..++ .-++...++||.++...
T Consensus       411 va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~  489 (571)
T KOG4441|consen  411 VAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSA  489 (571)
T ss_pred             cCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEE-EECCEEEEECCccCCCc
Confidence                 01112221 22567777777554      4678888776655433321  1111222 22455666666665211


Q ss_pred             EEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCCc-----EEEEECCCC
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDGF-----LISNTLSNG  605 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg~-----I~vwdl~~~  605 (894)
                      +         ..|..||.+..+....  +......+..+.+  +++..+.|+.||.     |..||....
T Consensus       490 ~---------~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  490 L---------SSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             c---------ceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCCC
Confidence            1         1266777766554432  2223333333333  5677788887764     555655443

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=91.16  E-value=2.3  Score=50.05  Aligned_cols=94  Identities=18%  Similarity=0.362  Sum_probs=62.3

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEc--CCCCEEEEEeCCCCc-----------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFS--KDATMFITASHSQAV-----------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~s--pdg~~la~~~~d~~i-----------  476 (894)
                      ....-+.-|.-++..++-+....+.|||...+....+-.....+.|.++.|.  |||+.|+..|...++           
T Consensus        30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~  109 (631)
T PF12234_consen   30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT  109 (631)
T ss_pred             CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence            3444444555555555555556899999998876544332222389999985  688988888877766           


Q ss_pred             -------------------cceEEEEEecCCCEEEEEECCCCEEEEEc
Q psy10063        477 -------------------EPINDMQFSKDATMFITASKDHTAKLFTT  505 (894)
Q Consensus       477 -------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl  505 (894)
                                         .+|.+..|.++|.+++.+  +..+.|+|-
T Consensus       110 ~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk  155 (631)
T PF12234_consen  110 NKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK  155 (631)
T ss_pred             cCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence                               467777888888765544  355777753

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=90.58  E-value=39  Score=39.24  Aligned_cols=52  Identities=8%  Similarity=0.059  Sum_probs=28.3

Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCC----eeEEEEcCCCCEEEEEE
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERP----VNSAALSPILPHVVLGG  536 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~----v~~l~~spdg~~l~~~~  536 (894)
                      +.+.++|.+|+...  ..++.+|+. |+.+..+.....    -..+.+.|+|.+|+.+.
T Consensus       153 ~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~  208 (477)
T PF05935_consen  153 FKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNLLILAS  208 (477)
T ss_dssp             EEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-EEEEEE
T ss_pred             eeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCEEEEEe
Confidence            44556777666544  677778875 666666654332    36778889999998887

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>KOG2377|consensus

Probab=90.49  E-value=33  Score=38.23  Aligned_cols=98  Identities=13%  Similarity=0.180  Sum_probs=69.5

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEE----EEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLK----TYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~----~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      ++|.+|.|++|.+.||+--.|..|.++.....+...    ..+.+ ..|...+|+.. .-++.....|            
T Consensus        67 G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G------------  133 (657)
T KOG2377|consen   67 GEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG------------  133 (657)
T ss_pred             CceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC------------
Confidence            389999999999999999999999999874333222    22222 34888999876 6677666666            


Q ss_pred             eeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCCEEEE
Q psy10063        552 KFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYAS  590 (894)
Q Consensus       552 ~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~~l~s  590 (894)
                         +.+|-+.. ...++.++.|...|.-..|.++-+.++-
T Consensus       134 ---~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL  170 (657)
T KOG2377|consen  134 ---IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILL  170 (657)
T ss_pred             ---eEEEEEchhhhhhhhhhhcccCccEEEEccccceEee
Confidence               45554432 3345566778888999999998775443

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=90.47  E-value=5.6  Score=39.53  Aligned_cols=30  Identities=30%  Similarity=0.458  Sum_probs=19.5

Q ss_pred             EEEEecCCCEEEEEeCCC--cEEEEECCCCccc
Q psy10063        578 SLAFHPDGKSYASGGEDG--FLISNTLSNGLDI  608 (894)
Q Consensus       578 ~l~~spdg~~l~sgs~Dg--~I~vwdl~~~~~~  608 (894)
                      .+.+. +|.+|.+.+.-|  .|++||+..++.+
T Consensus        50 GL~~~-~g~i~esTG~yg~S~ir~~~L~~gq~~   81 (262)
T COG3823          50 GLEYL-DGHILESTGLYGFSKIRVSDLTTGQEI   81 (262)
T ss_pred             ceeee-CCEEEEeccccccceeEEEeccCceEE
Confidence            34443 566677766544  5999999877643

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=90.40  E-value=4.4  Score=45.33  Aligned_cols=148  Identities=13%  Similarity=0.194  Sum_probs=87.6

Q ss_pred             CCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063        421 DQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT  499 (894)
Q Consensus       421 g~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~  499 (894)
                      ..+|+ .|+....++-.|++.|+.+.....|..  | -|.|.|+-++               -+.. +.+.|+ |-.+..
T Consensus       479 ssli~~dg~~~~kLykmDIErGkvveeW~~~dd--v-vVqy~p~~kf---------------~qmt-~eqtlv-GlS~~s  538 (776)
T COG5167         479 SSLIYLDGGERDKLYKMDIERGKVVEEWDLKDD--V-VVQYNPYFKF---------------QQMT-DEQTLV-GLSDYS  538 (776)
T ss_pred             cceEEecCCCcccceeeecccceeeeEeecCCc--c-eeecCCchhH---------------HhcC-ccceEE-eecccc
Confidence            33444 355556688888999999999888875  2 3444443211               0001 122333 333444


Q ss_pred             EEEEEcC-CCcEEEEEeCCCCeeEEEEc----CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC
Q psy10063        500 AKLFTTH-DRQLLKTYTTERPVNSAALS----PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  574 (894)
Q Consensus       500 V~iwdl~-~~~~~~~~~~~~~v~~l~~s----pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~  574 (894)
                      |.-.|.+ .|..+...+....+..-.|+    -...+|++++..|.              ||+||.........+.+...
T Consensus       539 vFrIDPR~~gNKi~v~esKdY~tKn~Fss~~tTesGyIa~as~kGD--------------irLyDRig~rAKtalP~lG~  604 (776)
T COG5167         539 VFRIDPRARGNKIKVVESKDYKTKNKFSSGMTTESGYIAAASRKGD--------------IRLYDRIGKRAKTALPGLGD  604 (776)
T ss_pred             eEEecccccCCceeeeeehhccccccccccccccCceEEEecCCCc--------------eeeehhhcchhhhcCccccc
Confidence            4444544 33333322222222222222    23458899888885              89998776666666788888


Q ss_pred             CeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        575 PINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      .|..|....+|++|++.+. ..|.+-|+.
T Consensus       605 aIk~idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         605 AIKHIDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             ceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence            9999999999999887765 467777764

>COG1770 PtrB Protease II [Amino acid transport and metabolism]

Probab=90.38  E-value=43  Score=39.42  Aligned_cols=65  Identities=22%  Similarity=0.212  Sum_probs=46.1

Q ss_pred             CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      .+-.++.|||+++|+.+-....         ...|.+++.|+.+|+.+-..  -.+.+.+++|..|++.|+-...|
T Consensus       130 ~Lg~~~~s~D~~~la~s~D~~G---------~e~y~lr~kdL~tg~~~~d~--i~~~~~~~~Wa~d~~~lfYt~~d  194 (682)
T COG1770         130 SLGAASISPDHNLLAYSVDVLG---------DEQYTLRFKDLATGEELPDE--ITNTSGSFAWAADGKTLFYTRLD  194 (682)
T ss_pred             eeeeeeeCCCCceEEEEEeccc---------ccEEEEEEEecccccccchh--hcccccceEEecCCCeEEEEEEc
Confidence            3556788999998888765443         23456999999998876432  23346688999999977766544

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=90.31  E-value=1  Score=32.70  Aligned_cols=30  Identities=13%  Similarity=0.258  Sum_probs=24.5

Q ss_pred             ceEEEEEecC-C--CEEEEEECCCCEEEEEcCC
Q psy10063        478 PINDMQFSKD-A--TMFITASKDHTAKLFTTHD  507 (894)
Q Consensus       478 ~V~~l~~spd-g--~~L~sgs~Dg~V~iwdl~~  507 (894)
                      .|++++|+|+ +  .+|+.+-.-|.|.|+|++.
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            5788888874 3  5888888889999999995

It contains a characteristic DLL sequence motif.

>KOG3616|consensus

Probab=90.24  E-value=11  Score=44.05  Aligned_cols=70  Identities=7%  Similarity=-0.067  Sum_probs=43.8

Q ss_pred             ecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063        756 LAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYH  831 (894)
Q Consensus       756 ~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd  831 (894)
                      +..|.+.|--|.+...+..|+.-...-.+.++|+.+.+... +..-|..+.|-|-...++.-.++.     +.||-
T Consensus       333 ~inh~~~vdwielne~~~kllfrdkk~kl~l~di~s~qksm-ilnfcsymqwvp~sdvivaqn~dn-----l~iwy  402 (1636)
T KOG3616|consen  333 FINHEGAVDWIELNERAHKLLFRDKKLKLHLVDIESCQKSM-ILNFCSYMQWVPGSDVIVAQNGDN-----LCIWY  402 (1636)
T ss_pred             cccccccccceeccchhhhhhcccccceeEEEEcccchHHH-HHHHhhhheeccCcceEEecCCCc-----eEEEe
Confidence            34577777767777667777766666678888877655321 222344566777777777666653     67763

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=90.12  E-value=26  Score=36.51  Aligned_cols=138  Identities=13%  Similarity=0.103  Sum_probs=85.2

Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      -..|+-.+||..-+.+...|.|--.|.++|+....--+ ......|..-|||..-++-++..               |..
T Consensus        64 p~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~a---------------I~R  128 (353)
T COG4257          64 PFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGLA---------------IGR  128 (353)
T ss_pred             ccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcce---------------eEE
Confidence            34556667777777777777777778888887655433 45667788888887665544332               444


Q ss_pred             EeccccceEE-Ec--cCCCCCeEEEEEecCCCEEEEEeC---------CCcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063        558 YHLIFEEEFA-RI--KGHFGPINSLAFHPDGKSYASGGE---------DGFLISNTLSNGLDISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       558 wd~~~~~~~~-~l--~~h~~~V~~l~~spdg~~l~sgs~---------Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~  625 (894)
                      .|-++.+..+ .|  +.-........|.++|.+-+++..         .+.|++|+.-      .+.-...++..|+|.+
T Consensus       129 ~dpkt~evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaP------qG~gpyGi~atpdGsv  202 (353)
T COG4257         129 LDPKTLEVTRFPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAP------QGGGPYGICATPDGSV  202 (353)
T ss_pred             ecCcccceEEeecccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccC------CCCCCcceEECCCCcE
Confidence            4443333221 12  223456778899999987777642         2457777664      3445567888898877


Q ss_pred             EEe--cCCeEEEEe
Q psy10063        626 YPS--QGGHIHSLS  637 (894)
Q Consensus       626 l~~--~~g~i~~~~  637 (894)
                      ...  .+..+..++
T Consensus       203 wyaslagnaiarid  216 (353)
T COG4257         203 WYASLAGNAIARID  216 (353)
T ss_pred             EEEeccccceEEcc
Confidence            744  344444444

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=90.08  E-value=18  Score=44.77  Aligned_cols=110  Identities=10%  Similarity=0.086  Sum_probs=70.4

Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCCCc-----EEE-------EE-eC---CCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHDRQ-----LLK-------TY-TT---ERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~-----~~~-------~~-~~---~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      ....++|.| +.+.||.....|...|||+..+.     .++       .+ ..   ......+.|..+...|+++.... 
T Consensus       147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~-  225 (765)
T PF10214_consen  147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSK-  225 (765)
T ss_pred             ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCc-
Confidence            677899998 56789999999999999992111     111       11 10   12334788888888888877665 


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEc--cCCCCCeEEEEEecC--CCEEEEEeCCCcEEEEECCC
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPINSLAFHPD--GKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V~~l~~spd--g~~l~sgs~Dg~I~vwdl~~  604 (894)
                                    +.++|++.......+  ......|..+.-+++  +..|+..  ...|...++..
T Consensus       226 --------------l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT--s~eiiw~~~~~  277 (765)
T PF10214_consen  226 --------------LMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT--SKEIIWLDVKS  277 (765)
T ss_pred             --------------eEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEe--cCeEEEEEccC
Confidence                          777888766553312  234457888887776  2333322  25666667665

These proteins are found in fungi.

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=89.76  E-value=51  Score=39.26  Aligned_cols=31  Identities=10%  Similarity=0.351  Sum_probs=27.9

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~  508 (894)
                      .|..|.|..+++.+++....|.|++||...+
T Consensus       131 kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~  161 (670)
T PF10395_consen  131 KVVGIKFSSDGKIIYVVLENGSIQIYDFSEN  161 (670)
T ss_pred             ceEEEEEecCCCEEEEEEcCCcEEEEecccc
Confidence            7889999999999999999999999999433

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>PRK13614 lipoprotein LpqB; Provisional

Probab=89.59  E-value=47  Score=39.28  Aligned_cols=76  Identities=9%  Similarity=-0.043  Sum_probs=44.8

Q ss_pred             CCeeEEEEcCCCCEEEEEE-CCCC--eEEEeccCccceeeEEEEeccccceE-----EEccCCCCCeEEEEEecCCCEEE
Q psy10063        518 RPVNSAALSPILPHVVLGG-GQEA--REVTTTSTKVGKFDARFYHLIFEEEF-----ARIKGHFGPINSLAFHPDGKSYA  589 (894)
Q Consensus       518 ~~v~~l~~spdg~~l~~~~-~~~~--~~v~~~~~~~~~~~v~vwd~~~~~~~-----~~l~~h~~~V~~l~~spdg~~l~  589 (894)
                      ..|..+.+|+||-++++.. .++.  +.|-           .|-.-..|+..     ..+ ++...+.+++|..++.+++
T Consensus       434 ~~I~~lrvSrDG~R~Avi~~~~g~~~V~va-----------~V~R~~~G~P~~L~~~~~~-~~~~~~~sl~W~~~~sl~V  501 (573)
T PRK13614        434 RTVKELRVSREGVRALVISEQNGKSRVQVA-----------GIVRNEDGTPRELTAPITL-AADSDADTGAWVGDSTVVV  501 (573)
T ss_pred             CeeEEEEECCCccEEEEEEEeCCccEEEEE-----------EEEeCCCCCeEEccCceec-ccCCCcceeEEcCCCEEEE
Confidence            3499999999999887755 2333  3331           12222233311     122 3346889999999888766


Q ss_pred             EEe---CCCcEEEEECCCC
Q psy10063        590 SGG---EDGFLISNTLSNG  605 (894)
Q Consensus       590 sgs---~Dg~I~vwdl~~~  605 (894)
                      .+.   .+..+++..+..+
T Consensus       502 ~~~~~~~~~~~~~v~v~~g  520 (573)
T PRK13614        502 TKASATSNVVPELLSVDAG  520 (573)
T ss_pred             EeccCCCcceEEEEEeCCC
Confidence            653   2344677777443

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=89.46  E-value=35  Score=40.06  Aligned_cols=188  Identities=14%  Similarity=0.159  Sum_probs=86.3

Q ss_pred             CCCEEEEEEccCC-CEEEEecC--CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCC---C-C------EEEEEeCCCC
Q psy10063        409 SAKITSLLWGNLD-QYIITGHA--KGDICTWDLRMGRELESISGHAKEPINDMQFSKD---A-T------MFITASHSQA  475 (894)
Q Consensus       409 ~~~V~~l~~spdg-~~L~sgs~--Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spd---g-~------~la~~~~d~~  475 (894)
                      .....++++-.+| .+|+.|+.  |+.+..|....-+.+..+....  +|.++++...   + .      .|++++..+.
T Consensus       255 ~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N~~--Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~  332 (504)
T PF10433_consen  255 CSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPNWG--PIVDFCVVDSSNSGQPSNPSSDQLVACSGAGK  332 (504)
T ss_dssp             -S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE------SEEEEEEE-TSSSSS-------EEEEEESSGG
T ss_pred             CChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccCcC--CccceEEeccccCCCCcccccceEEEEECcCC
Confidence            5555667776665 36776655  5556666655556666666543  8888888532   1 1      5666665555


Q ss_pred             ccceEEEEEe--cCCCEEEEEECCCCEEEEEcCCCc-----EEEEEeCC------------CCeeEE---EEcCCCCEEE
Q psy10063        476 VEPINDMQFS--KDATMFITASKDHTAKLFTTHDRQ-----LLKTYTTE------------RPVNSA---ALSPILPHVV  533 (894)
Q Consensus       476 i~~V~~l~~s--pdg~~L~sgs~Dg~V~iwdl~~~~-----~~~~~~~~------------~~v~~l---~~spdg~~l~  533 (894)
                      -+.+.-+...  +.+..++.....+.-++|-++...     ++..+...            +.+..+   .|..+.+.|+
T Consensus       333 ~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S~~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~  412 (504)
T PF10433_consen  333 RGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVLSFPNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLA  412 (504)
T ss_dssp             G-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEEEESSEEEEEEES----SSEEEEE---TS-SSS-EEE
T ss_pred             CCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEEEcCCceEEEEEecccCCcchhhhhhccCCCCCCCeE
Confidence            4455444432  122244455555666677665321     11111111            111111   3445556666


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccceEEEccC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG-HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ++.-.+...+-....     .|++.+...++....... ....|.+.++  .+.+++.+..++.+.++.++..
T Consensus       413 ~~~~~~~~ivQVt~~-----~i~l~~~~~~~~~~~w~~~~~~~I~~a~~--~~~~v~v~~~~~~~~~~~~~~~  478 (504)
T PF10433_consen  413 AGNVGDGRIVQVTPK-----GIRLIDLEDGKLTQEWKPPAGSIIVAASI--NDPQVLVALSGGELVYFELDDN  478 (504)
T ss_dssp             EEEETTTEEEEEESS-----EEEEEESSSTSEEEEEE-TTS---SEEEE--SSSEEEEEE-TTEEEEEEEETT
T ss_pred             EEEcCCCeEEEEecC-----eEEEEECCCCeEEEEEeCCCCCeEEEEEE--CCCEEEEEEeCCcEEEEEEECC
Confidence            665533322211111     166666665555544322 2234444444  3345666666777777776554

...

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=89.34  E-value=47  Score=38.28  Aligned_cols=60  Identities=13%  Similarity=0.244  Sum_probs=40.5

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCC
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                      ..|..+.|...|. |..|..|| +..||...++.++.-..  +.+|..+..+-.| .|.+|..+|
T Consensus       165 ~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG  226 (671)
T COG3292         165 TPVVALVFDANGR-LWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG  226 (671)
T ss_pred             ccceeeeeeccCc-EEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc
Confidence            4677888887775 55666777 66778888887775543  3556666665554 567777777

>KOG2280|consensus

Probab=89.10  E-value=29  Score=41.11  Aligned_cols=56  Identities=18%  Similarity=0.350  Sum_probs=34.1

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec---CCCCCCeeEEEEcCCCCEE
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS---GHAKEPINDMQFSKDATMF  467 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~---~h~~~~V~~v~~spdg~~l  467 (894)
                      +.+-.+.|+.+.. |++...||.++||++. |+.+....   ......|..+.|...|-.+
T Consensus        84 ~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~GVav  142 (829)
T KOG2280|consen   84 GELIGMGWSDDEE-LICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNGVAV  142 (829)
T ss_pred             CCeeeecccCCce-EEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCceEE
Confidence            3888999998765 5555689999999986 43333311   1111146666665555333

>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats

Probab=89.06  E-value=53  Score=38.53  Aligned_cols=117  Identities=8%  Similarity=-0.073  Sum_probs=66.6

Q ss_pred             CCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce---eeccccCCCceEeec-CCCeEEEEecCCCCc--------ee
Q psy10063        759 PVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA---TAGFLLSCPDFLFDF-DTTREVTTTSTKVGK--------FD  826 (894)
Q Consensus       759 h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~---~~~~~~~~~~~~fS~-dg~~l~~as~d~~g~--------~~  826 (894)
                      ....|+++.|--|.-||++=-.=--+.+.|+...+.   +-.+.....+--++| +..+|+-.+.+....        ..
T Consensus       324 ~gE~IysvRF~Gd~~Y~VTFrqvDPLfviDLsdP~~P~vlGeLKIPGfS~YLHP~~e~~LlGiG~~~~~~~~~~~~~GlK  403 (521)
T PF09826_consen  324 PGERIYSVRFMGDRAYLVTFRQVDPLFVIDLSDPANPKVLGELKIPGFSDYLHPYDENHLLGIGKDTDEDEGTGWTQGLK  403 (521)
T ss_pred             CCceEEEEEEeCCeEEEEEEeecCceEEEECCCCCCCceeeEEECccchhceeECCCCeEEEEcccCcccccccccceeE
Confidence            457799999999999999866544488888776543   222222222222555 344444444444444        67


Q ss_pred             EEEeecCCcc---eeeecc-C----CC---CCeeEEEEeeCCcEEEEecC-------CCcEEEEecC
Q psy10063        827 ARFYHLIFEE---EFARIK-G----HF---GPINSLAFHPDGKSYASGGE-------DGFVRLHTFD  875 (894)
Q Consensus       827 I~vwd~~tg~---~l~~l~-g----H~---~~V~~l~fSpdg~~LaS~s~-------Dg~V~vWdl~  875 (894)
                      |.|||+..-.   .+..+. |    ++   .--.++.|.++..+|+.--.       -..++|+++.
T Consensus       404 isLFDVSD~~~P~e~~~~~iG~~~s~S~a~~dhkAfl~~~~~~ll~~Pv~~~~~~~~~~g~~v~~i~  470 (521)
T PF09826_consen  404 ISLFDVSDPANPKELDKEVIGDRGSYSEALYDHKAFLFDKEKNLLAFPVSSSYGYFNFQGAYVFSID  470 (521)
T ss_pred             EEEEecCCCCCccEeEEEEcCCCCccCccccCceEEEEeCCCCEEEEEEEEccCccccceEEEEEEe
Confidence            8899987542   222211 1    11   11246788887776654221       1236777777

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=89.01  E-value=8.7  Score=38.70  Aligned_cols=52  Identities=15%  Similarity=0.120  Sum_probs=40.8

Q ss_pred             CEEEEEECCCCEEEEEcC--CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        489 TMFITASKDHTAKLFTTH--DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~--~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      +.|+.+.....|.+|++.  ..+++..|..-+.|..+.++..|++|++--.+..
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~   82 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNK   82 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecC
Confidence            445454667789999998  4556777777799999999999999999766554

>PRK05560 DNA gyrase subunit A; Validated

Probab=88.95  E-value=70  Score=39.79  Aligned_cols=63  Identities=11%  Similarity=0.057  Sum_probs=36.3

Q ss_pred             eEEEEEec--CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        479 INDMQFSK--DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       479 V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      |.++.+..  +..+++..+.+|.|+--++...       .....+..++.+..+........|++.+..|.+
T Consensus       593 v~~i~~~~~~~e~~lvlvTk~GyiKRi~l~~~~~~~r~G~~~ikLke~D~lv~v~~~~~~d~lll~T~~Gr~  664 (805)
T PRK05560        593 TAILPVREFDDDKYLFFATKNGTVKKTSLSEFSNIRSNGIIAINLDEGDELIGVRLTDGDDDILLATKNGKA  664 (805)
T ss_pred             EEEEeccCCCCCCEEEEEeCCCEEEEEEhHHhhhcccCCceeeccCCCCEEEEEEEeCCCCEEEEEECCCcE
Confidence            34444442  5678888899999887766432       222233334455555555555666666666653

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=88.85  E-value=33  Score=35.85  Aligned_cols=194  Identities=9%  Similarity=0.012  Sum_probs=92.6

Q ss_pred             eeeeeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEE
Q psy10063        382 RLNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQF  460 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~  460 (894)
                      +.++.++||..+...+.....-.|.-..+.|..+.+-.-. -+.+..+.||...|-|  ++.-|.+|..... .|...-+
T Consensus        65 ~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd--~~~aI~R~dpkt~-evt~f~l  141 (353)
T COG4257          65 FDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITD--TGLAIGRLDPKTL-EVTRFPL  141 (353)
T ss_pred             cccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEec--CcceeEEecCccc-ceEEeec
Confidence            4455666666666555544444455555555555443211 1333344555544433  3434444443322 2222221


Q ss_pred             cCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECC
Q psy10063        461 SKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       461 spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~  538 (894)
                      -.+          .--.......|.++|.+-+++.. |.---.|.. ...++.|.  .....+.|+..|+|...++.-..
T Consensus       142 p~~----------~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa-~~~i~vfpaPqG~gpyGi~atpdGsvwyaslag  209 (353)
T COG4257         142 PLE----------HADANLETAVFDPWGNLWFTGQI-GAYGRLDPA-RNVISVFPAPQGGGPYGICATPDGSVWYASLAG  209 (353)
T ss_pred             ccc----------cCCCcccceeeCCCccEEEeecc-ccceecCcc-cCceeeeccCCCCCCcceEECCCCcEEEEeccc
Confidence            100          00024566777788877777642 110001111 11223333  23567888999999877765555


Q ss_pred             CCeEEEeccCccceeeEEEEeccccceEE--EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        539 EAREVTTTSTKVGKFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~--~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      ..              |...|-..+....  .-.........+.-++.|+.-++-...+.+..||-..
T Consensus       210 na--------------iaridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~  263 (353)
T COG4257         210 NA--------------IARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSV  263 (353)
T ss_pred             cc--------------eEEcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCccc
Confidence            54              3334443332111  1112122334455566777767666666777776544

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=88.65  E-value=49  Score=37.87  Aligned_cols=59  Identities=20%  Similarity=0.288  Sum_probs=37.8

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE--EEEec----C-CCCCCeeEEEEcCCC
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE--LESIS----G-HAKEPINDMQFSKDA  464 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~----~-h~~~~V~~v~~spdg  464 (894)
                      +...-..-+.|+|.|||++|++--..|.|++++...+..  +..+.    . ... .+..|+|+|+-
T Consensus        25 va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~-GLlglal~PdF   90 (454)
T TIGR03606        25 LLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHN-GLLGLALHPDF   90 (454)
T ss_pred             EECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCC-ceeeEEECCCc
Confidence            334556788999999997777665468999998655432  21111    1 223 67778887763

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=88.52  E-value=40  Score=36.44  Aligned_cols=106  Identities=14%  Similarity=0.045  Sum_probs=63.2

Q ss_pred             CEEEEEEccCCCEEEEec------------------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEE--
Q psy10063        411 KITSLLWGNLDQYIITGH------------------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITA--  470 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs------------------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~--  470 (894)
                      ....+.+.++|..|++.-                  .|+.+..-|+++|+.+.+......-............ ...+  
T Consensus        58 d~He~~it~~gt~lvt~~~~~~~dls~~gg~~~g~i~d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~-~~~g~~  136 (299)
T PF14269_consen   58 DHHEFEITPDGTALVTAYNPTPADLSPVGGPEDGWILDDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDPL-PGSGGS  136 (299)
T ss_pred             CccceEEcCCCcEEEEEccceeccccccCcCCCccEecceeEEeccCCCCEEEEEEhhheecccccccccccc-cCCCcC
Confidence            355566667777666221                  2455667788888888777643220000000000000 0000  


Q ss_pred             -eCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC
Q psy10063        471 -SHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE  517 (894)
Q Consensus       471 -~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~  517 (894)
                       ..-...-.|.+|....+|.+|+|+-.-..|.+.|-++|+++..+.+.
T Consensus       137 ~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~  184 (299)
T PF14269_consen  137 SSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK  184 (299)
T ss_pred             CCCCCCccEeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence             00011136788888889999999988889999999999999888654

>KOG4460|consensus

Probab=88.50  E-value=4.5  Score=45.44  Aligned_cols=98  Identities=7%  Similarity=0.078  Sum_probs=64.5

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC-
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA-  488 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg-  488 (894)
                      -.|..+..++.|..++-.|.+|.+..+=.+....-..|+..+. -|.|-.|+-+.+++.....    -.+..++|+|+. 
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~-~v~CRt~~i~~~~ftss~~----ltl~Qa~WHP~S~  178 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKS-TVNCRTTPVAERFFTSSTS----LTLKQAAWHPSSI  178 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCc-eEEEEeecccceeeccCCc----eeeeeccccCCcc
Confidence            5688888999999999888888655543232222333443333 4555555555544443311    167889999965 


Q ss_pred             --CEEEEEECCCCEEEEEcCCCcEEE
Q psy10063        489 --TMFITASKDHTAKLFTTHDRQLLK  512 (894)
Q Consensus       489 --~~L~sgs~Dg~V~iwdl~~~~~~~  512 (894)
                        ..|+.-+.|..|||||+.....+.
T Consensus       179 ~D~hL~iL~sdnviRiy~lS~~tely  204 (741)
T KOG4460|consen  179 LDPHLVLLTSDNVIRIYSLSEPTELY  204 (741)
T ss_pred             CCceEEEEecCcEEEEEecCCcchhh
Confidence              567777789999999998766653

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=88.36  E-value=18  Score=38.70  Aligned_cols=98  Identities=9%  Similarity=0.039  Sum_probs=64.5

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC-eEEE---eccC--ccceeeEEEEec
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA-REVT---TTST--KVGKFDARFYHL  560 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~-~~v~---~~~~--~~~~~~v~vwd~  560 (894)
                      +|++.++-+..|.|..+|.++|+........+....++|.  |++++++-+.-. -.++   .++.  +....-|.+.|+
T Consensus       212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl  289 (335)
T TIGR03032       212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDL  289 (335)
T ss_pred             CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEEC
Confidence            6777788888899999998888888777778889999999  888877654321 0010   0000  111123777888


Q ss_pred             cccceEEEc--cCCCCCeEEEEEecCCC
Q psy10063        561 IFEEEFARI--KGHFGPINSLAFHPDGK  586 (894)
Q Consensus       561 ~~~~~~~~l--~~h~~~V~~l~~spdg~  586 (894)
                      .+|..++.+  .+--..+.+++.-|.-+
T Consensus       290 ~tG~vv~~l~feg~v~EifdV~vLPg~r  317 (335)
T TIGR03032       290 NSGDVVHWLRFEGVIEEIYDVAVLPGVR  317 (335)
T ss_pred             CCCCEEEEEEeCCceeEEEEEEEecCCC
Confidence            888776654  34445677777766533

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=88.22  E-value=35  Score=41.15  Aligned_cols=148  Identities=13%  Similarity=0.107  Sum_probs=78.0

Q ss_pred             ccceeeeeccCccEEEecC-CC----eEEEE-----EecCCCCEEEEEEccCCCEEEEecC------CCc-------EEE
Q psy10063        379 SVDRLNSMSPAARKLATNA-EP----VVKMQ-----VTDQSAKITSLLWGNLDQYIITGHA------KGD-------ICT  435 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~-~~----~~~~~-----l~~H~~~V~~l~~spdg~~L~sgs~------Dg~-------I~i  435 (894)
                      .......++|||+.++... ..    .+.+.     +..+...|....|+++|+.++....      |+.       +.+
T Consensus        60 ~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (620)
T COG1506          60 GGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGGLITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRLPV  139 (620)
T ss_pred             CcccccccCCCCCEEEEEeccCCCcceEEEEecCCceeeeecccccceeCCCCCeEEEEecccccccCCceeeeecccce
Confidence            3444556799999998765 11    11111     3556788889999999998887321      121       223


Q ss_pred             EecCCC-eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC-------EEEEEcCC
Q psy10063        436 WDLRMG-RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT-------AKLFTTHD  507 (894)
Q Consensus       436 Wd~~tg-~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~-------V~iwdl~~  507 (894)
                      |....+ +..           ....+...+ .+.......  ..+....+.+++..++....+..       ..+|...+
T Consensus       140 ~~~~~g~~~~-----------~l~~~d~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (620)
T COG1506         140 WFDGRGGERS-----------DLYVVDIES-KLIKLGLGN--LDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGN  205 (620)
T ss_pred             eecCCCCccc-----------ceEEEccCc-ccccccCCC--CceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCC
Confidence            332222 110           000000000 000000000  14555555555666655543332       33333346


Q ss_pred             CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        508 RQLLKTYTTERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       508 ~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      +.+.........+..+.|.++|+.++..+....
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~gk~~~~~~~~~~  238 (620)
T COG1506         206 GELESLTPGEGSISKLAFDADGKSIALLGTESD  238 (620)
T ss_pred             CceEEEcCCCceeeeeeeCCCCCeeEEeccCCc
Confidence            666666666677999999999997777665544

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=88.20  E-value=2.8  Score=43.08  Aligned_cols=82  Identities=12%  Similarity=0.089  Sum_probs=61.7

Q ss_pred             eccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-------cc-------CCCCCeeEEEEeeCCcEEE
Q psy10063        796 AGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-------IK-------GHFGPINSLAFHPDGKSYA  861 (894)
Q Consensus       796 ~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-------l~-------gH~~~V~~l~fSpdg~~La  861 (894)
                      ..+..++..+.+..++.++++...++    .+++||+..++++..       +.       .....|..+.+..+|.-|+
T Consensus         7 P~i~Lgs~~~~l~~~~~~Ll~iT~~G----~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV   82 (219)
T PF07569_consen    7 PPIVLGSPVSFLECNGSYLLAITSSG----LLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIV   82 (219)
T ss_pred             CcEecCCceEEEEeCCCEEEEEeCCC----eEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEE
Confidence            34455666667888999999988887    699999998876533       22       3557789999999998888


Q ss_pred             EecCCCcEEEEecCccccccc
Q psy10063        862 SGGEDGFVRLHTFDQAYFDYT  882 (894)
Q Consensus       862 S~s~Dg~V~vWdl~~~~~~~~  882 (894)
                      +-+ +|..++|+.+-+.++..
T Consensus        83 ~ls-ng~~y~y~~~L~~W~~v  102 (219)
T PF07569_consen   83 TLS-NGDSYSYSPDLGCWIRV  102 (219)
T ss_pred             EEe-CCCEEEeccccceeEEe
Confidence            775 57889999876665543

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PRK13613 lipoprotein LpqB; Provisional

Probab=87.91  E-value=39  Score=40.29  Aligned_cols=127  Identities=8%  Similarity=0.020  Sum_probs=70.5

Q ss_pred             CEEEEEEccCCCEEEEecCCC-cEEEEecCCCeE-----EEEecCC--------CCCCeeEEEEcCCCCE-EEEEeCCCC
Q psy10063        411 KITSLLWGNLDQYIITGHAKG-DICTWDLRMGRE-----LESISGH--------AKEPINDMQFSKDATM-FITASHSQA  475 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg-~I~iWd~~tg~~-----~~~l~~h--------~~~~V~~v~~spdg~~-la~~~~d~~  475 (894)
                      .+.+++.++++..+|....++ .+++..+..+..     ...+.+.        ..+.|+.+.-...+.. |.....++.
T Consensus       364 ~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g~vWtvd~~~~~~~vl~v~~~~G~  443 (599)
T PRK13613        364 PLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRGDLWVVDRDPADPRLLWLLQGDGE  443 (599)
T ss_pred             CccceEEcCCCceEEEEcCCCcEEEEeccCCCCccccccceeeccCcccCCcCcCCCCEEEecCCCCCceEEEEEcCCCc
Confidence            688999999998888776655 566655432322     1112211        1124555433223332 222222222


Q ss_pred             c----------cceEEEEEecCCCEEEEEEC---CCCEEEEEc---CCCc-EEEE---Ee-CCCCeeEEEEcCCCCEEEE
Q psy10063        476 V----------EPINDMQFSKDATMFITASK---DHTAKLFTT---HDRQ-LLKT---YT-TERPVNSAALSPILPHVVL  534 (894)
Q Consensus       476 i----------~~V~~l~~spdg~~L~sgs~---Dg~V~iwdl---~~~~-~~~~---~~-~~~~v~~l~~spdg~~l~~  534 (894)
                      .          +.|..+..|+||-+++.-..   .+.|+|=-+   ..|+ .+..   +. .-..+.+++|..++.+++.
T Consensus       444 ~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL~Vl  523 (599)
T PRK13613        444 PVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQLVVL  523 (599)
T ss_pred             EEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEEEEE
Confidence            2          37999999999998877543   255555433   2343 1111   11 1245899999999887776


Q ss_pred             EEC
Q psy10063        535 GGG  537 (894)
Q Consensus       535 ~~~  537 (894)
                      +..
T Consensus       524 g~~  526 (599)
T PRK13613        524 GRE  526 (599)
T ss_pred             ecc
Confidence            643

>TIGR01063 gyrA DNA gyrase, A subunit

Probab=87.85  E-value=59  Score=40.35  Aligned_cols=200  Identities=12%  Similarity=0.037  Sum_probs=89.7

Q ss_pred             ccceeeeeccCccEEEecCCCeEE-------------EEEecCCCCEEEEEEc--cCCCEEEEecCCCcEEEEecCCCeE
Q psy10063        379 SVDRLNSMSPAARKLATNAEPVVK-------------MQVTDQSAKITSLLWG--NLDQYIITGHAKGDICTWDLRMGRE  443 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~~~~-------------~~l~~H~~~V~~l~~s--pdg~~L~sgs~Dg~I~iWd~~tg~~  443 (894)
                      ..+.++.|+..|+++.......-.             +.+..-..-|.++.+.  .++.+|+..+.+|.|+..++..-+.
T Consensus       545 t~d~LllfTs~Grv~~l~~~~IP~~~r~~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~~~~lvliT~~GyiKRi~l~~~~~  624 (800)
T TIGR01063       545 THDYLLFFTNRGKVYWLKVYQIPEASRTAKGKPIVNLLPLQPDERITAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSN  624 (800)
T ss_pred             CCCeEEEEeCCCcEEEEEhhhCcCCCcCCCCcCHHHhccCCCCCeEEEEEEeccCCCCCEEEEEeCCCEEEEEEhHHhhh
Confidence            344566677777776543211100             1222223344555543  2456788888889888887654322


Q ss_pred             EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCC---------CcEEEEE
Q psy10063        444 LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHD---------RQLLKTY  514 (894)
Q Consensus       444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~  514 (894)
                      ...     . ++.++.|.. +..            +..+........|+..+..|.+..+.+..         |.....+
T Consensus       625 ~~r-----~-G~~aiklke-~D~------------lv~v~~~~~~d~lll~Ts~Gr~~r~~v~eIp~~gr~~~Gv~~i~L  685 (800)
T TIGR01063       625 IRS-----N-GIIAIKLDD-GDE------------LISVRLTSGDDEVMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKL  685 (800)
T ss_pred             hcc-----C-CcccccCCC-CCE------------EEEEEEeCCCCEEEEEECCCcEEEEEhhhcCCcCCCCCCeecccC
Confidence            111     1 223333322 121            11111112223344444455444443321         1122222


Q ss_pred             eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec-cccceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       515 ~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      ..++.|.++....++.+|+..+..|.+.....+.      ++...- ..|.....+....+.+..+....+...|+..+.
T Consensus       686 ~~~E~Vv~~~~v~~~~~ll~vT~~G~~Kr~~l~e------~~~~~R~~kGv~~ikl~~~~d~lv~~~~v~~~~~v~liT~  759 (800)
T TIGR01063       686 KNEDFVVSLLVVSEESYLLIVTENGYGKRTSIEE------YRETSRGGKGVKSIKITDRNGQVVGAIAVDDDDELMLITS  759 (800)
T ss_pred             CCCCEEEEEEEeccccEEEEEecCCcEEEEEHHH------ccccCCCCcceEEEEccCCCCeEEEEEEecCCCeEEEEec
Confidence            2344555555444555777777777643322110      000000 012222233333344444444444455666677


Q ss_pred             CCcEEEEECC
Q psy10063        594 DGFLISNTLS  603 (894)
Q Consensus       594 Dg~I~vwdl~  603 (894)
                      +|.+..+...
T Consensus       760 ~G~~lrf~~~  769 (800)
T TIGR01063       760 AGKLIRTSVQ  769 (800)
T ss_pred             CCeEEEeeHh
Confidence            8887777654

This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV.

>KOG3630|consensus

Probab=87.84  E-value=2.1  Score=52.17  Aligned_cols=146  Identities=12%  Similarity=0.116  Sum_probs=80.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC---CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG---HAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~---h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      -...++|++|+|.|+.|+.|-..|++.-|... ++..+++.+   .....|.+|+|.....+|++-+.-      .+..=
T Consensus       197 ~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy~n~------ts~~~  269 (1405)
T KOG3630|consen  197 VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFLVVYGNV------TSETD  269 (1405)
T ss_pred             cccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEEEEeccc------ccCcC
Confidence            34578999999999999999999999998755 444444433   222378888888777666654421      11111


Q ss_pred             ecCC--CEEEEEECCCCEEEEEcCCCcE----EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        485 SKDA--TMFITASKDHTAKLFTTHDRQL----LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       485 spdg--~~L~sgs~Dg~V~iwdl~~~~~----~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      .||.  .++..-..+|.+.+-..-.+.+    +....|...++-..|.++.+.|++.+....-.|-.+.. ..  ++..|
T Consensus       270 dpd~y~~~~~k~kp~g~~nF~E~~d~tppfg~~~rq~h~y~~~L~~W~~~~~~vVvvansaSsEvsila~-~~--qW~~w  346 (1405)
T KOG3630|consen  270 DPDSYDQKMYKIKPDGSANFQETFDITPPFGQIVRQPHMYKVTLSGWIEPDANVVVVANSASSEVSILAS-MK--QWIEW  346 (1405)
T ss_pred             CchhhhhccccccCcceeeeccccCCCCCccccCccchhHHHhhhhhcccccceEEEecccccchhhhhh-hc--ceeec
Confidence            1110  0111122455555544433333    33333444556667887776666655444333322222 12  24556


Q ss_pred             ecccc
Q psy10063        559 HLIFE  563 (894)
Q Consensus       559 d~~~~  563 (894)
                      .+..+
T Consensus       347 ~~vde  351 (1405)
T KOG3630|consen  347 SQVDE  351 (1405)
T ss_pred             ccccc
Confidence            55544

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=87.40  E-value=9.5  Score=45.01  Aligned_cols=31  Identities=10%  Similarity=0.023  Sum_probs=24.4

Q ss_pred             CCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        572 HFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       572 h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      -...|...+||.|.+.++....+..|.+++-
T Consensus       111 v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k  141 (1243)
T COG5290         111 VSNGIVAASWSADEKTWCVVTSTREILLFDK  141 (1243)
T ss_pred             ccCceEEEeeccCCceEEEEEcCceEEEEec
Confidence            4567888999999997777777788887763

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=87.35  E-value=2.6  Score=30.13  Aligned_cols=41  Identities=17%  Similarity=0.175  Sum_probs=30.3

Q ss_pred             cCCCEEEEEE-CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEc
Q psy10063        486 KDATMFITAS-KDHTAKLFTTHDRQLLKTYTTERPVNSAALS  526 (894)
Q Consensus       486 pdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~s  526 (894)
                      |++++|+++. .++.|.++|+.+++.+..+........++|+
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~~   42 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAVS   42 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEeC
Confidence            4666666544 5789999999999999888876556666653

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=87.33  E-value=5  Score=47.19  Aligned_cols=91  Identities=9%  Similarity=0.195  Sum_probs=49.9

Q ss_pred             EEEEecCCCEEEEEECCC-----CEEEEEc---CCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        481 DMQFSKDATMFITASKDH-----TAKLFTT---HDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg-----~V~iwdl---~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .++|-|+|..+++-..||     .|.++.-   +-|+.-.....+..+..++|.-....++++-+..             
T Consensus       251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~-------------  317 (1243)
T COG5290         251 QLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNL-------------  317 (1243)
T ss_pred             ccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhcce-------------
Confidence            378999999998876554     2445432   2222222222344566677766555555544333             


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCC
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK  586 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~  586 (894)
                        +++|-........+..-....+.-+.|+|...
T Consensus       318 --~~lwttkNyhWYLK~e~~ip~~s~vkwhpe~~  349 (1243)
T COG5290         318 --LKLWTTKNYHWYLKVERQIPGISYVKWHPEEK  349 (1243)
T ss_pred             --EEEEEccceEEEEEEeecCCCcceeeeccccC
Confidence              56665444333333333344567788998654

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=87.18  E-value=32  Score=37.20  Aligned_cols=69  Identities=10%  Similarity=0.056  Sum_probs=38.5

Q ss_pred             eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC-Ce----EEEEEecCCCEEEEEeCC
Q psy10063        520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG-PI----NSLAFHPDGKSYASGGED  594 (894)
Q Consensus       520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~-~V----~~l~~spdg~~l~sgs~D  594 (894)
                      +.+|....+|.+|+++-.-..              |.+.+.++|+.+-.+.|... ..    ..++|-.|-+++-.+..+
T Consensus       146 iNsV~~~~~G~yLiS~R~~~~--------------i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~  211 (299)
T PF14269_consen  146 INSVDKDDDGDYLISSRNTST--------------IYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDD  211 (299)
T ss_pred             eeeeeecCCccEEEEecccCE--------------EEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCC
Confidence            556666677777766655544              55556666666666655421 11    113333344445445567


Q ss_pred             CcEEEEEC
Q psy10063        595 GFLISNTL  602 (894)
Q Consensus       595 g~I~vwdl  602 (894)
                      +.|.|+|=
T Consensus       212 ~~IslFDN  219 (299)
T PF14269_consen  212 GTISLFDN  219 (299)
T ss_pred             CEEEEEcC
Confidence            77777765

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=87.09  E-value=13  Score=34.58  Aligned_cols=93  Identities=6%  Similarity=0.105  Sum_probs=57.1

Q ss_pred             EEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE---Eec--CCC
Q psy10063        415 LLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ---FSK--DAT  489 (894)
Q Consensus       415 l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~---~sp--dg~  489 (894)
                      -.|......|+++..-|.|.|++.........-   ....|..|-|..               .|.+|+   |.+  +..
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~---~~~~i~~LNin~---------------~italaaG~l~~~~~~D   65 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGR---QDSDISFLNINQ---------------EITALAAGRLKPDDGRD   65 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCcccccccc---ccCceeEEECCC---------------ceEEEEEEecCCCCCcC
Confidence            455555568888888899999987644322111   111444444433               344443   332  345


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEc
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALS  526 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~s  526 (894)
                      .|+.|+ ...|.+||+....-+..-+..+.|.++.+-
T Consensus        66 ~LliGt-~t~llaYDV~~N~d~Fyke~~DGvn~i~~g  101 (136)
T PF14781_consen   66 CLLIGT-QTSLLAYDVENNSDLFYKEVPDGVNAIVIG  101 (136)
T ss_pred             EEEEec-cceEEEEEcccCchhhhhhCccceeEEEEE
Confidence            677765 467999999987766655566777777763

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=86.57  E-value=16  Score=36.49  Aligned_cols=95  Identities=12%  Similarity=0.088  Sum_probs=55.3

Q ss_pred             CCCEEEEecCC--CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC
Q psy10063        420 LDQYIITGHAK--GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD  497 (894)
Q Consensus       420 dg~~L~sgs~D--g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D  497 (894)
                      +|.+|.+.+.-  ..|++||+..|+.+..-.-... .+..--       +...+     ..++.+.|           .+
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~-~~FgEG-------it~~g-----d~~y~LTw-----------~e  110 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPD-TVFGEG-------ITKLG-----DYFYQLTW-----------KE  110 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCc-cccccc-------eeecc-----ceEEEEEe-----------cc
Confidence            45666665543  4699999999987765432211 111000       00000     13444444           46


Q ss_pred             CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      |.-.++|.++.+++..+..++.-+.++  .|++.|+.+.+...
T Consensus       111 gvaf~~d~~t~~~lg~~~y~GeGWgLt--~d~~~LimsdGsat  151 (262)
T COG3823         111 GVAFKYDADTLEELGRFSYEGEGWGLT--SDDKNLIMSDGSAT  151 (262)
T ss_pred             ceeEEEChHHhhhhcccccCCcceeee--cCCcceEeeCCceE
Confidence            777889999999998887666555554  45666766655554

>TIGR01063 gyrA DNA gyrase, A subunit

Probab=86.44  E-value=96  Score=38.57  Aligned_cols=55  Identities=16%  Similarity=0.092  Sum_probs=32.8

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcE-------EEEEeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQL-------LKTYTTERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~-------~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      +..+|+..+.+|.|+-.++...+.       ...+..++.+..+........|++.+..|.+
T Consensus       601 ~~~~lvliT~~GyiKRi~l~~~~~~~r~G~~aiklke~D~lv~v~~~~~~d~lll~Ts~Gr~  662 (800)
T TIGR01063       601 DGLYLFFATKNGVVKKTSLTEFSNIRSNGIIAIKLDDGDELISVRLTSGDDEVMLGSKNGKA  662 (800)
T ss_pred             CCCEEEEEeCCCEEEEEEhHHhhhhccCCcccccCCCCCEEEEEEEeCCCCEEEEEECCCcE
Confidence            456788889999999887654321       1122234455555555555566666666653

This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV.

>KOG1900|consensus

Probab=86.42  E-value=5.1  Score=50.03  Aligned_cols=163  Identities=12%  Similarity=0.115  Sum_probs=86.5

Q ss_pred             CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEc-CCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063        421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFS-KDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT  499 (894)
Q Consensus       421 g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~s-pdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~  499 (894)
                      ++.-++-  |..+.+|++.++.....+.+... .|..|.+- |.-                 -.|-|.=++|+..+---.
T Consensus        91 ~RaWiTi--Dn~L~lWny~~~~e~~~~d~~sh-tIl~V~LvkPkp-----------------gvFv~~IqhlLvvaT~~e  150 (1311)
T KOG1900|consen   91 GRAWITI--DNNLFLWNYESDNELAEYDGLSH-TILKVGLVKPKP-----------------GVFVPEIQHLLVVATPVE  150 (1311)
T ss_pred             cceEEEe--CCeEEEEEcCCCCccccccchhh-hheeeeeecCCC-----------------CcchhhhheeEEecccce
Confidence            4433443  67899999999888888877665 55554432 111                 012222222222222233


Q ss_pred             EEEEEcC----CCcE---E--EEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee--EEEEeccccce--
Q psy10063        500 AKLFTTH----DRQL---L--KTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD--ARFYHLIFEEE--  565 (894)
Q Consensus       500 V~iwdl~----~~~~---~--~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~--v~vwd~~~~~~--  565 (894)
                      |.|+-+.    .+..   .  ..+.. +-.|.|+....+|+.++. |.+|.++-..+....+-|.  .+..++..+..  
T Consensus       151 i~ilgV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~-G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~  229 (1311)
T KOG1900|consen  151 IVILGVSFDEFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFA-GRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSS  229 (1311)
T ss_pred             EEEEEEEeccccCcccccccceeeecCCceEEEEEeccCCcEEEe-ecCCCEEEEEEeccCchhhcccccccCchhHHHH
Confidence            3333221    1110   0  11222 456888887777765554 5555433222222222111  22222221110  


Q ss_pred             ----EEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        566 ----FARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       566 ----~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                          +..+. .+..+|..|........|++-++.|.|++|++..
T Consensus       230 lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  230 LVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             hhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence                12233 5778999999988878899999999999999976

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=86.27  E-value=15  Score=38.27  Aligned_cols=73  Identities=8%  Similarity=0.070  Sum_probs=43.3

Q ss_pred             EEecCCCEEEEEECCC-CEEEEEcCC--CcEEE--EEeC-----C-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        483 QFSKDATMFITASKDH-TAKLFTTHD--RQLLK--TYTT-----E-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg-~V~iwdl~~--~~~~~--~~~~-----~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      ...+||+.|+.|+.+. ...+|.-+.  .....  .+..     . .---.+.+.|+|+.++.+..+.            
T Consensus       124 ~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s------------  191 (243)
T PF07250_consen  124 TTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS------------  191 (243)
T ss_pred             eECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc------------
Confidence            3456888888887764 345665432  11111  1111     1 2234667789999888877543            


Q ss_pred             eeeEEEEeccccceEEEccC
Q psy10063        552 KFDARFYHLIFEEEFARIKG  571 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~  571 (894)
                          .|||....+.++.|..
T Consensus       192 ----~i~d~~~n~v~~~lP~  207 (243)
T PF07250_consen  192 ----IIYDYKTNTVVRTLPD  207 (243)
T ss_pred             ----EEEeCCCCeEEeeCCC
Confidence                5678887777676654

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PLN02153 epithiospecifier protein

Probab=85.89  E-value=54  Score=36.14  Aligned_cols=13  Identities=8%  Similarity=0.049  Sum_probs=8.7

Q ss_pred             eEEEEeccccceE
Q psy10063        554 DARFYHLIFEEEF  566 (894)
Q Consensus       554 ~v~vwd~~~~~~~  566 (894)
                      +|.+||....+..
T Consensus       218 ~v~~yd~~~~~W~  230 (341)
T PLN02153        218 AVQFFDPASGKWT  230 (341)
T ss_pred             ceEEEEcCCCcEE
Confidence            3778887766544

>KOG1896|consensus

Probab=85.85  E-value=1.1e+02  Score=38.64  Aligned_cols=78  Identities=12%  Similarity=0.201  Sum_probs=40.9

Q ss_pred             eccCccEEEecCCC----eEE------EEEecCCCCEEEEEEcc---------CCCEEEEecCCCcEEEEecCCCeEEEE
Q psy10063        386 MSPAARKLATNAEP----VVK------MQVTDQSAKITSLLWGN---------LDQYIITGHAKGDICTWDLRMGRELES  446 (894)
Q Consensus       386 ~s~dg~~l~~~~~~----~~~------~~l~~H~~~V~~l~~sp---------dg~~L~sgs~Dg~I~iWd~~tg~~~~~  446 (894)
                      |..|++.|..+.-.    .++      +.+.+|.....-+.|..         ++-+|++-+..|.|.+|+++.......
T Consensus       582 f~~~~~Tl~~gnlg~~rriVQVtp~~~rllDg~~r~lq~i~fd~~~~vv~~sv~dpyv~v~~~~g~i~~~~l~~~s~rl~  661 (1366)
T KOG1896|consen  582 FTRDGPTLFAGNLGNERRIVQVTPSGLRLLDGDLRMLQRIPFDSGAIVVQTSVADPYVAVRSSEGRITLYDLEEKSHRLA  661 (1366)
T ss_pred             eEeccceEEEEecCCceEEEEEccceeEEecCcchheeEeccccCCcEEEEeccCceEEEEEcCCceEEEEeccccchhh
Confidence            56677766654211    111      14455555555555543         345777777778888888875522111


Q ss_pred             ecCCCCCCeeEEEEcCC
Q psy10063        447 ISGHAKEPINDMQFSKD  463 (894)
Q Consensus       447 l~~h~~~~V~~v~~spd  463 (894)
                      +..+....+.++...+|
T Consensus       662 ~~~~~s~~~~sv~~~~d  678 (1366)
T KOG1896|consen  662 LHDPMSFKVVSVSLPAD  678 (1366)
T ss_pred             ccCcccceeEEEechhh
Confidence            12221225666665554

>PHA03098 kelch-like protein; Provisional

Probab=85.56  E-value=58  Score=38.49  Aligned_cols=56  Identities=9%  Similarity=0.019  Sum_probs=32.5

Q ss_pred             EEEeecCCccee--eeccCCCCCeeEEEEeeCCcEEEEecCC-----CcEEEEecCccccccccc
Q psy10063        827 ARFYHLIFEEEF--ARIKGHFGPINSLAFHPDGKSYASGGED-----GFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       827 I~vwd~~tg~~l--~~l~gH~~~V~~l~fSpdg~~LaS~s~D-----g~V~vWdl~~~~~~~~~~  884 (894)
                      +.+||..+++-.  ..+.........+  .-++++++.||.+     ..|.+||.+..++.....
T Consensus       458 v~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~  520 (534)
T PHA03098        458 VESYNPVTNKWTELSSLNFPRINASLC--IFNNKIYVVGGDKYEYYINEIEVYDDKTNTWTLFCK  520 (534)
T ss_pred             EEEecCCCCceeeCCCCCcccccceEE--EECCEEEEEcCCcCCcccceeEEEeCCCCEEEecCC
Confidence            788888766432  2221111111122  2378888888865     468889988887654443

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=85.44  E-value=6.2  Score=40.51  Aligned_cols=53  Identities=6%  Similarity=0.075  Sum_probs=36.9

Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEE---------------eCCCCeeEEEEcCCCCEEEEEE
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTY---------------TTERPVNSAALSPILPHVVLGG  536 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~---------------~~~~~v~~l~~spdg~~l~~~~  536 (894)
                      +...+.+|++...+|.+++||+..++++..-               .....|..+.+..+|.-|+.-+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls   85 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS   85 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe
Confidence            3446889999999999999999998876432               1224566666666665555443

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=85.16  E-value=60  Score=36.24  Aligned_cols=191  Identities=13%  Similarity=0.017  Sum_probs=0.0

Q ss_pred             CccceeeeeccCccEEEecCCCeEEEEEecCCC---CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC-CC
Q psy10063        378 LSVDRLNSMSPAARKLATNAEPVVKMQVTDQSA---KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA-KE  453 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~H~~---~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~-~~  453 (894)
                      ....++.....+|++.+...+...+++-.....   .+.+-.+..+|+ |+.++.+|.++.+|.++|+.+..+.... . 
T Consensus        66 ~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~-  143 (370)
T COG1520          66 DGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSP-  143 (370)
T ss_pred             eeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCe-


Q ss_pred             CeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCC
Q psy10063        454 PINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILP  530 (894)
Q Consensus       454 ~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~  530 (894)
                                              .+..-.+-.++..++.. .++.+...|..+|+.+..+..   ..............
T Consensus       144 ------------------------~~~~~~v~~~~~v~~~s-~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~  198 (370)
T COG1520         144 ------------------------YYASPPVVGDGTVYVGT-DDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG  198 (370)
T ss_pred             ------------------------EEecCcEEcCcEEEEec-CCCeEEEEEccCCcEEEEEecCCccccccccCceeecc


Q ss_pred             EEEEEEC--CCCeEEEeccCccceeeEEEEeccccceEEE----ccCC------CCCeEEEEEecCCCEEEEEeCCCcEE
Q psy10063        531 HVVLGGG--QEAREVTTTSTKVGKFDARFYHLIFEEEFAR----IKGH------FGPINSLAFHPDGKSYASGGEDGFLI  598 (894)
Q Consensus       531 ~l~~~~~--~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~----l~~h------~~~V~~l~~spdg~~l~sgs~Dg~I~  598 (894)
                      .++++..  ++.              +.-.+++.|..+-.    ..--      ...+..-...-++.. +.++.++.+.
T Consensus       199 ~vy~~~~~~~~~--------------~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~g~~~  263 (370)
T COG1520         199 TVYVGSDGYDGI--------------LYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGV-YAGSYGGKLL  263 (370)
T ss_pred             eEEEecCCCcce--------------EEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcE-EEEecCCeEE


Q ss_pred             EEECCCCccccC
Q psy10063        599 SNTLSNGLDISE  610 (894)
Q Consensus       599 vwdl~~~~~~~~  610 (894)
                      ..+...++.++.
T Consensus       264 ~l~~~~G~~~W~  275 (370)
T COG1520         264 CLDADTGELIWS  275 (370)
T ss_pred             EEEcCCCceEEE

>KOG2377|consensus

Probab=85.02  E-value=6.3  Score=43.59  Aligned_cols=117  Identities=12%  Similarity=0.098  Sum_probs=74.7

Q ss_pred             CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-------cCCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063        758 GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-------LSCPDFLFDFDTTREVTTTSTKVGKFDARFY  830 (894)
Q Consensus       758 ~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vw  830 (894)
                      ...+.|.+|.||+|.+.||+--.|..|.++.....+......       ..+...+|+.. ..++.....+     |.+|
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-----~e~y  137 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-----IEFY  137 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-----eEEE
Confidence            345689999999999999999999999999864333322111       11234455544 4455555544     6666


Q ss_pred             ecCCc-ceeeeccCCCCCeeEEEEeeCCcEEEEe-c-CCCcEEEEecCccccc
Q psy10063        831 HLIFE-EEFARIKGHFGPINSLAFHPDGKSYASG-G-EDGFVRLHTFDQAYFD  880 (894)
Q Consensus       831 d~~tg-~~l~~l~gH~~~V~~l~fSpdg~~LaS~-s-~Dg~V~vWdl~~~~~~  880 (894)
                      -+... +.++..+.|.-.|.-..|+++-+.++-+ + ....+.=+.+..+...
T Consensus       138 ~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v~  190 (657)
T KOG2377|consen  138 QVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGTMS  190 (657)
T ss_pred             EEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeeceee
Confidence            65433 3456677899999999999998754433 3 3444444555554433

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=84.86  E-value=57  Score=34.52  Aligned_cols=171  Identities=11%  Similarity=0.031  Sum_probs=90.6

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE---EEecCCCCCCeeEEEEcCCCCEEEEEe-CCCCc---------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL---ESISGHAKEPINDMQFSKDATMFITAS-HSQAV---------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~---~~l~~h~~~~V~~v~~spdg~~la~~~-~d~~i---------  476 (894)
                      +.+..+.|+  +++++.+..+.-++|.|+.+...-   ..+.-. + .-.+  |.-.|+++.++. .++.+         
T Consensus        87 ~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~-g-yayg--v~vsGn~aYVadlddgfLivdvsdpss  160 (370)
T COG5276          87 DLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTD-G-YAYG--VYVSGNYAYVADLDDGFLIVDVSDPSS  160 (370)
T ss_pred             hhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCC-c-eEEE--EEecCCEEEEeeccCcEEEEECCCCCC
Confidence            444555565  457777777788999999765432   222211 1 2222  333455554444 22222         


Q ss_pred             -----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063        477 -----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYTTERPVNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       477 -----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                                 ..-+.++.|  |++-..+..|+-+.|.|+....   ++.....+..++++..+++..+++... .+   
T Consensus       161 P~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~-eg---  234 (370)
T COG5276         161 PQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD-EG---  234 (370)
T ss_pred             ceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc-cc---
Confidence                       122344443  5666677789999999997543   444444455788888887655544432 33   


Q ss_pred             EEeccCccceeeEEEEeccccceEEEccC-CCCCeEEE-EEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEEEFARIKG-HFGPINSL-AFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~~~~~l~~-h~~~V~~l-~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                                  +.+-|....+....+.. ....+.++ .+.-.|++......+..+.+-|++.
T Consensus       235 ------------vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn  286 (370)
T COG5276         235 ------------VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN  286 (370)
T ss_pred             ------------eEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence                        44445444332222211 11222222 2222456666666666666666654

>KOG2109|consensus

Probab=83.52  E-value=3.2  Score=47.87  Aligned_cols=76  Identities=14%  Similarity=0.160  Sum_probs=48.9

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCC-cEEEEecCCCeE-----EEEecCC----CCCCeeEEEEcCCCCEEEEE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKG-DICTWDLRMGRE-----LESISGH----AKEPINDMQFSKDATMFITA  470 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg-~I~iWd~~tg~~-----~~~l~~h----~~~~V~~v~~spdg~~la~~  470 (894)
                      ...+|+.|...|.+++|.+.|.+|++++..| .|.++.+..-.+     .+.+..+    ....+..++|+....+++.+
T Consensus       307 ~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfRimet~~t~~~~~qs~~~s~ra~t~aviqdicfs~~s~~r~~g  386 (788)
T KOG2109|consen  307 DIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFRIMETVCTVNVSDQSLVVSPRANTAAVIQDICFSEVSTIRTAG  386 (788)
T ss_pred             hhhheeeecCcccccccccCceEEEEEeeccceeeeEEeccccccccccccccccchhcchHHHHHHHhhhhhcceEeec
Confidence            3448889999999999999999999988765 355555432211     1111111    11134567788888888777


Q ss_pred             eCCCCc
Q psy10063        471 SHSQAV  476 (894)
Q Consensus       471 ~~d~~i  476 (894)
                      +.+|.-
T Consensus       387 sc~Ge~  392 (788)
T KOG2109|consen  387 SCEGEP  392 (788)
T ss_pred             ccCCCC
Confidence            766543

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=82.36  E-value=21  Score=38.04  Aligned_cols=80  Identities=10%  Similarity=0.209  Sum_probs=44.7

Q ss_pred             cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE------CCCCEEEEEc
Q psy10063        432 DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS------KDHTAKLFTT  505 (894)
Q Consensus       432 ~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs------~Dg~V~iwdl  505 (894)
                      .|++||....+....-.+-.+                         .|.+|.|..+.++|+.|.      ....+..||+
T Consensus        17 ~lC~yd~~~~qW~~~g~~i~G-------------------------~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~   71 (281)
T PF12768_consen   17 GLCLYDTDNSQWSSPGNGISG-------------------------TVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDF   71 (281)
T ss_pred             EEEEEECCCCEeecCCCCceE-------------------------EEEEEEEecCCEEEEEEeeEECCCCceeEEEEec
Confidence            599999887765544333333                         455555554444444443      3456788888


Q ss_pred             CCCcEEEEEe-----CCCCeeEEEEc-CCCCEEEEEE
Q psy10063        506 HDRQLLKTYT-----TERPVNSAALS-PILPHVVLGG  536 (894)
Q Consensus       506 ~~~~~~~~~~-----~~~~v~~l~~s-pdg~~l~~~~  536 (894)
                      ........-.     ..++|..+.+. .|+..+++++
T Consensus        72 ~~~~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG  108 (281)
T PF12768_consen   72 KNQTWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAG  108 (281)
T ss_pred             CCCeeeecCCcccccCCCcEEEEEeeccCCceEEEec
Confidence            7765432222     13677777764 3444455443

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=82.17  E-value=95  Score=35.07  Aligned_cols=133  Identities=13%  Similarity=0.069  Sum_probs=65.3

Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcE-EEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQL-LKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      +..++||.+++.+..-..++-||  .|+. .+.+.  ....+.++.|.+++..++++ ..+.+               ++
T Consensus       244 v~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l---------------~~  305 (398)
T PLN00033        244 VNRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGL---------------YV  305 (398)
T ss_pred             EEEcCCCCEEEEECCccEEEecC--CCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceE---------------EE
Confidence            34456666655554322222232  2332 12222  35678899999998877665 44432               12


Q ss_pred             eccccc-----eEEEccC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---cc----CCCceeeeEECcCCc
Q psy10063        559 HLIFEE-----EFARIKG--HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD---IS----EGSFTSSSTQQPDGL  624 (894)
Q Consensus       559 d~~~~~-----~~~~l~~--h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~---~~----~~~~v~~~~~spdg~  624 (894)
                      ....++     .+..+..  ....+.++.|.+++..++ ++..|.|.+.. +.++.   ..    ....+..+.|..+++
T Consensus       306 S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a-~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~  383 (398)
T PLN00033        306 SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWA-AGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKK  383 (398)
T ss_pred             ecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEE-EECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCc
Confidence            222221     1222221  223588899988776554 45667666553 33332   11    122355666655444


Q ss_pred             EE-EecCCeEE
Q psy10063        625 VY-PSQGGHIH  634 (894)
Q Consensus       625 ~l-~~~~g~i~  634 (894)
                      .+ ...+|.+.
T Consensus       384 g~~~G~~G~il  394 (398)
T PLN00033        384 GFVLGNDGVLL  394 (398)
T ss_pred             eEEEeCCcEEE
Confidence            44 33344433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	894
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		3e-39
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		3e-22
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-05
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-05
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-05
2h9l_A	329	Wdr5delta23 Length = 329		1e-05
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-05
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-05
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-05
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		1e-05
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-05
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-05
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-05
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		1e-05
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-05
2gnq_A	336	Structure Of Wdr5 Length = 336		2e-05
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-05
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		3e-05
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		8e-05
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-04
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		4e-04

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score =  160 bits (406), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/201 (42%), Positives = 116/201 (57%), Gaps = 26/201 (12%)
Query: 398 EPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE-LESISGHAKEPIN 456
           EP+ K+   +     T   W    +YII GH  G I  +D+    E ++SI  H K    
Sbjct: 164 EPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK---- 219
Query: 457 DMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT 516
                                 I+DMQFS D T FIT+S+D  + L      Q+LK Y T
Sbjct: 220 ---------------------SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET 258
Query: 517 ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI 576
           + P+N+A ++P+   ++LGGGQEA++VTTTS   GKF+ARFYH IFEEE  R++GHFGP+
Sbjct: 259 DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPL 318
Query: 577 NSLAFHPDGKSYASGGEDGFL 597
           N++A  P G SYASGGEDGF+
Sbjct: 319 NTVAISPQGTSYASGGEDGFI 339

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 54/63 (85%)
Query: 823 GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYT 882
           GKF+ARFYH IFEEE  R++GHFGP+N++A  P G SYASGGEDGF+RLH F+++YFD+ 
Sbjct: 293 GKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFK 352
Query: 883 FDI 885
           +D+
Sbjct: 353 YDV 355

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 85/179 (47%), Gaps = 30/179 (16%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 128 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 245
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP 583
              I  +  + GG+    V+ +   +       ++L  +E   +++GH   + S A HP
Sbjct: 246 ---IFANFSVTGGKWI--VSGSEDNL----VYIWNLQTKEIVQKLQGHTDVVISTACHP 295

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 236
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 237 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 283
Query: 582 HP 583
           HP
Sbjct: 284 HP 285

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 123 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 181
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 182 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 241
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 242 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 288
Query: 582 HP 583
           HP
Sbjct: 289 HP 290

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 139 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 197
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 198 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 257
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 258 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 304
Query: 582 HP 583
           HP
Sbjct: 305 HP 306

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 125 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 243
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 244 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 290
Query: 582 HP 583
           HP
Sbjct: 291 HP 292

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 122 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 240
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 241 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 287
Query: 582 HP 583
           HP
Sbjct: 288 HP 289

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 128 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 245
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 246 ---IFANFSVTGGKWIVS--------GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 294
Query: 583 P 583
           P
Sbjct: 295 P 295

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 125 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 243
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 244 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 290
Query: 582 HP 583
           HP
Sbjct: 291 HP 292

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 121 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 179
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 180 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 239
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 240 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 286
Query: 582 HP 583
           HP
Sbjct: 287 HP 288

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 122 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 239
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 240 ---IFANFSVTGGKWIVS--------GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 288
Query: 583 P 583
           P
Sbjct: 289 P 289

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 125 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 243
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 244 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 290
Query: 582 HP 583
           HP
Sbjct: 291 HP 292

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 127 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 185
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVN 521
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT    E+   
Sbjct: 186 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 245
Query: 522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF 581
            A  S      ++ G ++                  ++L  +E   +++GH   + S A 
Sbjct: 246 FANFSVTGGKWIVSGSEDNL-------------VYIWNLQTKEIVQKLQGHTDVVISTAC 292
Query: 582 HP 583
           HP
Sbjct: 293 HP 294

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 128 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 245
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 246 ---IFANFSVTGGKWIVS--------GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 294
Query: 583 P 583
           P
Sbjct: 295 P 295

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 146 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 204
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 205 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 263
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 264 ---IFANFSVTGGKWIVS--------GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 312
Query: 583 P 583
           P
Sbjct: 313 P 313

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G+ L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 261
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 262 ---IFANFSVTGGKWIVS--------GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 583 P 583
           P
Sbjct: 311 P 311

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G  L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 125 IVSGSFDESVRIWDVKTGMCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+T KL+     + LKTYT  +      
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC- 242
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 243 ---IFANFSVTGGKWIVS--------GSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACH 291
Query: 583 P 583
           P
Sbjct: 292 P 292

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 37/175 (21%)
Query: 439 RMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN-----------------D 481
           R G+ L++++GH+   +  + FS D     +AS  + V+  N                  
Sbjct: 127 RNGQLLQTLTGHS-SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWG 185
Query: 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEA 540
           + FS D     +AS D T KL+   + QLL+T T     V   A SP           + 
Sbjct: 186 VAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSP-----------DG 233
Query: 541 REVTTTST-KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 594
           + + + S  K  K   R   L+       + GH   +N +AF PDG++ AS  +D
Sbjct: 234 QTIASASDDKTVKLWNRNGQLL-----QTLTGHSSSVNGVAFRPDGQTIASASDD 283

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------- 472
           I++G     +  WD++ G  L+++  H+ +P++ + F++D ++ +++S+           
Sbjct: 125 IVSGSFDESVRIWDVKTGMCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 SQAVE--------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAA 524
            Q ++        P++ ++FS +    + A+ D+  KL+     + LKTYT  +      
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNDLKLWDYSKGKCLKTYTGHKNEKYC- 242
Query: 525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY--HLIFEEEFARIKGHFGPINSLAFH 582
              I  +  + GG+            G  D   Y  +L  +E   +++GH   + S A H
Sbjct: 243 ---IFANFSVTGGKWIVS--------GSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACH 291
Query: 583 P 583
           P
Sbjct: 292 P 292

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 75/193 (38%), Gaps = 51/193 (26%)
Query: 422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND 481
           Q+ ++G   G++  WDL  G       GH K+ ++                         
Sbjct: 443 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS------------------------- 477
Query: 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERP-------VNSAALSP--ILPHV 532
           + FS D    ++AS+D T KL+ T        YT           V+    SP  + P +
Sbjct: 478 VAFSLDNRQIVSASRDRTIKLWNTLGEC---KYTISEGGEGHRDWVSCVRFSPNTLQPTI 534
Query: 533 VLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG 592
           V     +  +V              ++L   +  + + GH G ++++A  PDG   ASGG
Sbjct: 535 VSASWDKTVKV--------------WNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG 580
Query: 593 EDGFLISNTLSNG 605
           +DG ++   L+ G
Sbjct: 581 KDGVVLLWDLAEG 593

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	894
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.98
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.98
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.97
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.97
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.97
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.97
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.97
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.97
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.96
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.96
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.96
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.96
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.96
3jro_A	753	Fusion protein of protein transport protein SEC13	99.96
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.96
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.96
2pm7_B	297	Protein transport protein SEC13, protein transport	99.96
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.96
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.96
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.96
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.96
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.96
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.96
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.96
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.96
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.96
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.95
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.95
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.95
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.95
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.95
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.94
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.94
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.94
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.94
3jro_A	753	Fusion protein of protein transport protein SEC13	99.94
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.94
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.93
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.93
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.93
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.93
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.93
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.93
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.92
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.91
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.91
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.9
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.89
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.89
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.89
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.89
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.88
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.87
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.87
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.87
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.87
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.86
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.86
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.86
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.85
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.85
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.84
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.84
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.84
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.83
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.82
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.81
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.81
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.81
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.8
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.79
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.78
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.78
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.78
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.77
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.76
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.75
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.74
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.73
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.72
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.71
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.7
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.7
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.68
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.68
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.65
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.64
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.6
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.6
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.59
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.59
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.58
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.58
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.58
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.58
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.57
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.57
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.57
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.56
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.54
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.54
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.52
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.51
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.5
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.49
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.48
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.46
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.43
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.41
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.4
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.4
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.39
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.37
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.36
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.35
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.34
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.33
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.3
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.28
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.28
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.27
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.24
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.22
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.22
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.22
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.19
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.19
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.18
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.18
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.17
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.14
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.09
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.07
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.07
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.05
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.04
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.04
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.02
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.02
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.99
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.98
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.97
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.96
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.96
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.94
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.93
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.92
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.92
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.91
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.9
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.87
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.87
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.86
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.79
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.77
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.75
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.73
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.73
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.71
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.69
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.65
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.63
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.58
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.58
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.57
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.55
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.55
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.55
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.49
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.45
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.44
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.44
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.42
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.38
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.37
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.32
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.27
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.22
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.21
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.19
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.17
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.16
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.15
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.13
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.12
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.1
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.1
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.08
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.08
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.06
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.06
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.02
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.02
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.0
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.96
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.9
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.89
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.82
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.74
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.73
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.72
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.72
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.65
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.62
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.61
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.59
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.56
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.51
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.48
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.45
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.44
3ott_A	758	Two-component system sensor histidine kinase; beta	97.38
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.36
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.32
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.29
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	97.27
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.23
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.2
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.15
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.06
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.02
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.94
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.81
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.71
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.7
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.7
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.56
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.54
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.5
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.48
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.47
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.31
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	95.96
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.92
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	95.83
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.8
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.77
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	95.73
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	95.64
3ott_A	758	Two-component system sensor histidine kinase; beta	95.59
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	95.55
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	95.45
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	95.3
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.25
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	95.23
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.94
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	94.85
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.72
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.32
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	94.25
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.24
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.23
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	94.06
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	93.83
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	93.57
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	93.45
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	92.77
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	92.39
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	92.09
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	91.94
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	90.94
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	90.68
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	89.32
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	88.78
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	88.73
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	86.11
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	85.47
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	83.63
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	83.13
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	83.05
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	82.9
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	81.94
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	81.87

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3.6e-48  Score=464.06  Aligned_cols=458  Identities=14%  Similarity=0.178  Sum_probs=340.5

Q ss_pred             cceeeeeccCccEEEecCCCeEEE----------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEe
Q psy10063        380 VDRLNSMSPAARKLATNAEPVVKM----------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESI  447 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~~~~~----------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l  447 (894)
                      ....++|+|||++|+.+....+++          .+.+|.+.|.+++|+|||++||+|+.||.|+|||+..+  ..+..+
T Consensus        20 ~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~   99 (611)
T 1nr0_A           20 TAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI   99 (611)
T ss_dssp             CCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred             ceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence            344567999999998876554333          57799999999999999999999999999999999754  346678


Q ss_pred             cCCCCCCeeEEEEcCCCCEEEEEeCCC--------------------CccceEEEEEecCCC-EEEEEECCCCEEEEEcC
Q psy10063        448 SGHAKEPINDMQFSKDATMFITASHSQ--------------------AVEPINDMQFSKDAT-MFITASKDHTAKLFTTH  506 (894)
Q Consensus       448 ~~h~~~~V~~v~~spdg~~la~~~~d~--------------------~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~  506 (894)
                      .+|.+ .|.+++|+|||++|++++.+.                    +.+.|.+++|+|++. +|++|+.|+.|+|||++
T Consensus       100 ~~~~~-~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~  178 (611)
T 1nr0_A          100 PVFSG-PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP  178 (611)
T ss_dssp             ECSSS-CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT
T ss_pred             cccCC-ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC
Confidence            88988 999999999999999888642                    226899999999987 69999999999999999


Q ss_pred             CCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-------CCCCCeEE
Q psy10063        507 DRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-------GHFGPINS  578 (894)
Q Consensus       507 ~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-------~h~~~V~~  578 (894)
                      .++++..+.. ...|.+++|+|+|++|++++.|+.              |++||+..++++..+.       +|.+.|.+
T Consensus       179 ~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~--------------i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~  244 (611)
T 1nr0_A          179 PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT--------------IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG  244 (611)
T ss_dssp             TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--------------EEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred             CCeEeeeeccccCceEEEEECCCCCEEEEEECCCc--------------EEEEECCCCcEeeeeccccccccccCCCEEE
Confidence            9999888874 578999999999999999999997              8999999998888874       79999999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEECCCCcccc-----------------------------------------------CC
Q psy10063        579 LAFHPDGKSYASGGEDGFLISNTLSNGLDIS-----------------------------------------------EG  611 (894)
Q Consensus       579 l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~-----------------------------------------------~~  611 (894)
                      ++|+|+|++|++++.|+.|+|||++.++.+.                                               +.
T Consensus       245 v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~  324 (611)
T 1nr0_A          245 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHN  324 (611)
T ss_dssp             EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCS
T ss_pred             EEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCC
Confidence            9999999999999999999999998765321                                               22


Q ss_pred             CceeeeEECcCCcEE--EecCCeEEEEecccCCC-----------------CCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063        612 SFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSS-----------------TDTGGVFSGSRVDDSGVELTKDEQIEMAR  672 (894)
Q Consensus       612 ~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~-----------------~d~~~i~sgs~~~d~~i~l~~~~~~~~~~  672 (894)
                      ..+.+++|+|+|.++  .+.++.+..|+......                 .....+++++  .++.+++|+........
T Consensus       325 ~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s--~d~~v~~w~~~~~~~~~  402 (611)
T 1nr0_A          325 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS--WDDHLKVVPAGGSGVDS  402 (611)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE--TTTEEEEECSSSSSSCT
T ss_pred             CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE--cCCceEEeecCCccccc
Confidence            345667777777666  34456666665422100                 0122344444  56667777644321110


Q ss_pred             hc------------ccccCCCCeEEeeccCCcceeEeccCcce-----eEEeeeEEEcCCCCEEEecccCccccccCCcc
Q psy10063        673 NR------------MSINHSGTRLHVNPFDEQQSVELTKDEQI-----EMARNRMSINHSGTRLHVNPFDEQQSVDASPL  735 (894)
Q Consensus       673 ~~------------~~~~~~g~~~~~~~~~~~~~~~~s~~~~~-----~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l  735 (894)
                      ..            +.+..++..+.....   ..+.+...+++     ......++++++|+.++.+..+..       +
T Consensus       403 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~---~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~-------v  472 (611)
T 1nr0_A          403 SKAVANKLSSQPLGLAVSADGDIAVAACY---KHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK-------V  472 (611)
T ss_dssp             TSCCEEECSSCEEEEEECTTSSCEEEEES---SEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE-------E
T ss_pred             cceeeeecCCCCcEEEEeCCCcEEEEEeC---ceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCe-------E
Confidence            00            000011111110000   00001101110     011235788899998888776554       6


Q ss_pred             eeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC-Cceeec-----cccCCCceEeec
Q psy10063        736 MTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK-NKATAG-----FLLSCPDFLFDF  809 (894)
Q Consensus       736 ~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~-~~~~~~-----~~~~~~~~~fS~  809 (894)
                      ++|+...+...     .... .+|...|.+|+|+|++++||+++.|+.|++|++.. ++.+..     +...+..++|+|
T Consensus       473 ~lwd~~~~~~~-----~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fsp  546 (611)
T 1nr0_A          473 HVYKLSGASVS-----EVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP  546 (611)
T ss_dssp             EEEEEETTEEE-----EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT
T ss_pred             EEEEccCCcee-----eeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECC
Confidence            77765433211     0112 57899999999999999999999999999999987 444332     344556788999


Q ss_pred             CCCeEEEEecCCCCceeEEEeecCCcc-ee-eeccCC-CCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        810 DTTREVTTTSTKVGKFDARFYHLIFEE-EF-ARIKGH-FGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       810 dg~~l~~as~d~~g~~~I~vwd~~tg~-~l-~~l~gH-~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      ||++|++++.|+    .|+|||+..++ ++ ..+.+| .+.|.+|+|+||++ |++++.|+.|+||++.
T Consensus       547 dg~~lasgs~D~----~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~  610 (611)
T 1nr0_A          547 DNVRLATGSLDN----SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP  610 (611)
T ss_dssp             TSSEEEEEETTS----CEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred             CCCEEEEEECCC----cEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence            999999999998    59999998875 33 677899 89999999999999 9999999999999983

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.5e-46  Score=444.24  Aligned_cols=454  Identities=21%  Similarity=0.300  Sum_probs=348.1

Q ss_pred             CCCccceeeeeccCccEEEecCCC-e---------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEP-V---------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~-~---------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      .+.+....++|+|||++|+.++.+ .         +...|.+|.+.|.+|+|+|||++||+++.|+.|+|||+ ++++++
T Consensus        14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~   92 (577)
T 2ymu_A           14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ   92 (577)
T ss_dssp             CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEE
Confidence            344556678899999999877543 2         33478899999999999999999999999999999996 588899


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------------------------------------
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAV-------------------------------------------------  476 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------------------------------------  476 (894)
                      .+.+|.. .|.+++|+|++++|++++.++.+                                                 
T Consensus        93 ~~~~~~~-~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (577)
T 2ymu_A           93 TLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ  171 (577)
T ss_dssp             EECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC
T ss_pred             EEECCCC-CEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceecccccee
Confidence            9999998 99999999999999999988755                                                 


Q ss_pred             ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                               ..|.+++|+|++++|++++.|+.|+|||. .++++..+. +...|.+++|+|++++|++++.++.      
T Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~------  244 (577)
T 2ymu_A          172 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT------  244 (577)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC------
T ss_pred             eeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCE------
Confidence                     36788999999999999999999999996 566776666 5688999999999999999999997      


Q ss_pred             cCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---ccCCCceeeeEECcCC
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD---ISEGSFTSSSTQQPDG  623 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~---~~~~~~v~~~~~spdg  623 (894)
                              |++||.. ++.+..+.+|...|.+++|+|++++|++++.|+.|++|+......   ..+...+..++|+|++
T Consensus       245 --------i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~  315 (577)
T 2ymu_A          245 --------VKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG  315 (577)
T ss_dssp             --------EEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS
T ss_pred             --------EEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCC
Confidence                    7888854 677888899999999999999999999999999999999765431   1245678889999999


Q ss_pred             cEEE--ecCCeEEEEecccC----------------CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEE
Q psy10063        624 LVYP--SQGGHIHSLSSHST----------------SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLH  685 (894)
Q Consensus       624 ~~l~--~~~g~i~~~~~~~~----------------~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~  685 (894)
                      ..++  ..++.+..|.....                ..+++..+++++  .++.+++|+......   .....+.+....
T Consensus       316 ~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~dg~v~~~~~~~~~~---~~~~~~~~~v~~  390 (577)
T 2ymu_A          316 QTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS--DDKTVKLWNRNGQLL---QTLTGHSSSVRG  390 (577)
T ss_dssp             SEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTCCEE---EEEECCSSCEEE
T ss_pred             CEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEe--CCCEEEEEcCCCCEE---EEecCCCCCeEE
Confidence            8774  44566666643110                134666777776  678899987432111   011112221111


Q ss_pred             ee-ccCCcceeEeccCcceeEE----------------eeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc
Q psy10063        686 VN-PFDEQQSVELTKDEQIEMA----------------RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL  748 (894)
Q Consensus       686 ~~-~~~~~~~~~~s~~~~~~~~----------------~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~  748 (894)
                      +. ..++...+....++.+.++                ...+.+++++..++....+..       +++|+        .
T Consensus       391 ~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-------v~~w~--------~  455 (577)
T 2ymu_A          391 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-------VKLWN--------R  455 (577)
T ss_dssp             EEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-------EEEEE--------T
T ss_pred             EEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-------EEEEE--------C
Confidence            11 1112222222222221111                123566667766666544432       55553        3


Q ss_pred             CCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCeEEEEecCCCCce
Q psy10063        749 DGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKF  825 (894)
Q Consensus       749 dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~  825 (894)
                      .++.+..+.+|...|.+++|+|++++||+++.|+.|+||+. .++.+.   .+...+..++|+|||++|++++.|+    
T Consensus       456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg----  530 (577)
T 2ymu_A          456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK----  530 (577)
T ss_dssp             TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS----
T ss_pred             CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC----
Confidence            44555677889999999999999999999999999999995 444443   3344566788999999999999887    


Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      .|+|||+ .++++..+.+|.+.|.+|+|+|||++|+++|.||.|+|||
T Consensus       531 ~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          531 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            6999996 5889999999999999999999999999999999999997

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=3.3e-44  Score=426.06  Aligned_cols=454  Identities=19%  Similarity=0.284  Sum_probs=331.7

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----  476 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----  476 (894)
                      .+..|+||.+.|.||+|||||++||+|+.|+.|+|||. ++++++.|.+|.. .|.+|+|+|||++|++++.|+.+    
T Consensus         8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~-~V~~l~fspdg~~las~~~d~~i~vWd   85 (577)
T 2ymu_A            8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWN   85 (577)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCC-CEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence            44579999999999999999999999999999999995 6899999999998 99999999999999999999876    


Q ss_pred             -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                                   ..|.+++|+|++++|++++.|+.+++|+...........+...+.++.|++++..++.++.++.+.+
T Consensus        86 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  165 (577)
T 2ymu_A           86 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL  165 (577)
T ss_dssp             TTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred             CCCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceec
Confidence                         5799999999999999999999999999775544433334455566666666655555555555544


Q ss_pred             EeccCcc---------------------------ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy10063        544 TTTSTKV---------------------------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF  596 (894)
Q Consensus       544 ~~~~~~~---------------------------~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~  596 (894)
                      |......                           ....|++||. .++.+..+.+|...|.+++|+|++++|++++.|+.
T Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~  244 (577)
T 2ymu_A          166 WNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT  244 (577)
T ss_dssp             ECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred             cccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCE
Confidence            4322110                           0012889995 47788889999999999999999999999999999


Q ss_pred             EEEEECCCCcc---ccCCCceeeeEECcCCcEEE--ecCCeEEEEeccc----------C------CCCCCCeeeecccc
Q psy10063        597 LISNTLSNGLD---ISEGSFTSSSTQQPDGLVYP--SQGGHIHSLSSHS----------T------SSTDTGGVFSGSRV  655 (894)
Q Consensus       597 I~vwdl~~~~~---~~~~~~v~~~~~spdg~~l~--~~~g~i~~~~~~~----------~------~~~d~~~i~sgs~~  655 (894)
                      |++|+......   ..+...+..++|+|++..++  ..++.+..|....          .      ..+++..+++++  
T Consensus       245 i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~--  322 (577)
T 2ymu_A          245 VKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS--  322 (577)
T ss_dssp             EEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE--
T ss_pred             EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEe--
Confidence            99999764431   12456788999999998774  4455666554211          0      124566777776  


Q ss_pred             CCCceEEechhhHHHhhhcccccCCCCeEEeec-cCCcceeEeccCcceeEE----------------eeeEEEcCCCCE
Q psy10063        656 DDSGVELTKDEQIEMARNRMSINHSGTRLHVNP-FDEQQSVELTKDEQIEMA----------------RNRMSINHSGTR  718 (894)
Q Consensus       656 ~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~s~~~~~~~~----------------~~~~~~s~~g~~  718 (894)
                      .++.+++|+.......   ....+......+.. .++...+....++.+.++                ...++++++|+.
T Consensus       323 ~d~~i~~w~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~  399 (577)
T 2ymu_A          323 DDKTVKLWNRNGQHLQ---TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT  399 (577)
T ss_dssp             TTSCEEEEETTSCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred             CCCeEEEEeCCCCeeE---EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCE
Confidence            6888999985432211   11111111111111 111111111122211111                133566667766


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--ee
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA--TA  796 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~--~~  796 (894)
                      ++.+..+.       .+++|+        ..++.+..+.+|...|.+++|+|++++|++++.|+.|++|+......  +.
T Consensus       400 l~~~~~d~-------~v~~~~--------~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~  464 (577)
T 2ymu_A          400 IASASDDK-------TVKLWN--------RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLT  464 (577)
T ss_dssp             EEEEETTS-------EEEEEC--------TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred             EEEEeCCC-------EEEEEe--------CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEc
Confidence            66554433       245553        33455566788999999999999999999999999999999643322  33


Q ss_pred             ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        797 GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       797 ~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      .+...+..++|+||+++|++++.++    .|+|||. .++++..+.+|...|.+|+|+|||++||+++.||.|+|||+..
T Consensus       465 ~~~~~v~~~~~spd~~~las~~~d~----~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~  539 (577)
T 2ymu_A          465 GHSSSVRGVAFSPDGQTIASASDDK----TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG  539 (577)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEETTS----EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred             CCCCCEEEEEEcCCCCEEEEEeCCC----EEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence            4445566788999999999999887    6999995 6889999999999999999999999999999999999999754


Q ss_pred             ccccccc
Q psy10063        877 AYFDYTF  883 (894)
Q Consensus       877 ~~~~~~~  883 (894)
                       +++..+
T Consensus       540 -~~~~~~  545 (577)
T 2ymu_A          540 -QLLQTL  545 (577)
T ss_dssp             -CEEEEE
T ss_pred             -CEEEEE
Confidence             444444

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.7e-43  Score=421.82  Aligned_cols=439  Identities=15%  Similarity=0.128  Sum_probs=310.5

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----------
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----------  476 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----------  476 (894)
                      .+.+.+.+++|+|||++|++++ ++.|+||++..++.+..|.+|.. .|.+++|+|+|++||+++.|+.+          
T Consensus        16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~-~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~   93 (611)
T 1nr0_A           16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSH-QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH   93 (611)
T ss_dssp             CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred             cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCC-ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc
Confidence            4578899999999999999998 56999999999999999999998 99999999999999999998866          


Q ss_pred             ----------cceEEEEEecCCCEEEEEECC----CCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCC
Q psy10063        477 ----------EPINDMQFSKDATMFITASKD----HTAKLFTTHDRQLLKTYT-TERPVNSAALSPILP-HVVLGGGQEA  540 (894)
Q Consensus       477 ----------~~V~~l~~spdg~~L~sgs~D----g~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~  540 (894)
                                +.|.+|+|+|+|++|++++.+    +.|++||  .++++..+. |...|.+++|+|++. +|++++.|+.
T Consensus        94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~  171 (611)
T 1nr0_A           94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT  171 (611)
T ss_dssp             CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred             eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCe
Confidence                      478999999999999999875    3577776  455555555 457899999999987 5999999987


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-----------c
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-----------S  609 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-----------~  609 (894)
                                    |++||...++++..+.+|...|.+++|+|||++|++|+.|+.|+|||+..++.+           .
T Consensus       172 --------------v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~  237 (611)
T 1nr0_A          172 --------------VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA  237 (611)
T ss_dssp             --------------EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCS
T ss_pred             --------------EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccc
Confidence                          899999999999999999999999999999999999999999999999877532           3


Q ss_pred             CCCceeeeEECcCCcEE--EecCCeEEEEecccCCC------------------CCCCeeeeccccCCCceEEechhhHH
Q psy10063        610 EGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSS------------------TDTGGVFSGSRVDDSGVELTKDEQIE  669 (894)
Q Consensus       610 ~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~------------------~d~~~i~sgs~~~d~~i~l~~~~~~~  669 (894)
                      +...+..++|+|+|.++  .+.++.+..|+......                  .++..+++++  .++.+++|+.....
T Consensus       238 h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s--~d~~i~~~~~~~~~  315 (611)
T 1nr0_A          238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS--ANGFINFVNPELGS  315 (611)
T ss_dssp             SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE--TTCCEEEEETTTTE
T ss_pred             cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe--CCCcEEEEeCCCCC
Confidence            45678899999999887  45567777776432100                  0122333333  45555555543221


Q ss_pred             Hhh---------hcccccCCCCeEEeeccCCcceeEeccCcc--------eeEEeeeEEEcCCCCEEEecccCccccccC
Q psy10063        670 MAR---------NRMSINHSGTRLHVNPFDEQQSVELTKDEQ--------IEMARNRMSINHSGTRLHVNPFDEQQSVDA  732 (894)
Q Consensus       670 ~~~---------~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~--------~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~  732 (894)
                      ...         ..+.+..++..+.....+....+.-...+.        .......+.+++++..+.. ..+..     
T Consensus       316 ~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~-s~d~~-----  389 (611)
T 1nr0_A          316 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV-SWDDH-----  389 (611)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEE-ETTTE-----
T ss_pred             cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEE-EcCCc-----
Confidence            100         011122233333332222211111000000        0011122333333322221 11111     


Q ss_pred             Ccceeecccc------------------CcccccCC----------------CCcceecCCCCceEEEeeCCCCCEEEEe
Q psy10063        733 SPLMTWGHIE------------------GTPFKLDG----------------SDTPILAGPVDIGFKMPEPPKREKLALA  778 (894)
Q Consensus       733 ~~l~~~~~~~------------------g~~~~~dg----------------~~~~~~~~h~~~v~~la~spdg~~Latg  778 (894)
                        +++|....                  ...+..++                .....+ .|...+.+++|+|||++||+|
T Consensus       390 --v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasg  466 (611)
T 1nr0_A          390 --LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVG  466 (611)
T ss_dssp             --EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEE
T ss_pred             --eEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEe
Confidence              11111000                  00000111                111122 266778999999999999999


Q ss_pred             cCCCcEEEEEccCCce----eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCC-cceeee--ccCCCCCeeEE
Q psy10063        779 LADKVSERYRDRKNKA----TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF-EEEFAR--IKGHFGPINSL  851 (894)
Q Consensus       779 s~Dg~I~iwd~~~~~~----~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~--l~gH~~~V~~l  851 (894)
                      +.|+.|+||++...+.    ...+...+..++|+|||++|++++.++    .|++|++.. ++++..  +.+|...|.+|
T Consensus       467 s~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~----~v~~w~~~~~~~~~~~~~~~~H~~~V~~v  542 (611)
T 1nr0_A          467 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSR----KVIPYSVANNFELAHTNSWTFHTAKVACV  542 (611)
T ss_dssp             ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTS----CEEEEEGGGTTEESCCCCCCCCSSCEEEE
T ss_pred             CCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCC----CEEEEEcCCCCceeeeeeeeecccceeEE
Confidence            9999999999876543    123445566889999999999999988    599999987 666554  34599999999


Q ss_pred             EEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        852 AFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       852 ~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      +|+|||++||+|+.|+.|+||+++.+.
T Consensus       543 ~fspdg~~lasgs~D~~v~lW~~~~~~  569 (611)
T 1nr0_A          543 SWSPDNVRLATGSLDNSVIVWNMNKPS  569 (611)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred             EECCCCCEEEEEECCCcEEEEECCCcc
Confidence            999999999999999999999998754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=7.7e-42  Score=408.09  Aligned_cols=466  Identities=14%  Similarity=0.144  Sum_probs=344.0

Q ss_pred             ccceeeeeccCccEEEecCCC--------------eEEEEEecCCCC-EEEEEEcc--CCCEEEEecCCCcEEEEecCCC
Q psy10063        379 SVDRLNSMSPAARKLATNAEP--------------VVKMQVTDQSAK-ITSLLWGN--LDQYIITGHAKGDICTWDLRMG  441 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~--------------~~~~~l~~H~~~-V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg  441 (894)
                      .....++|+|||++|+.+.+.              .....+.+|.+. |.+++|+|  ++++|++|+.||.|+|||+..+
T Consensus        19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~   98 (615)
T 1pgu_A           19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD   98 (615)
T ss_dssp             TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred             CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence            344556788888888765543              334466789999 99999999  9999999999999999999755


Q ss_pred             --------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC----C----------------ccceEEEEEecCCC-EEE
Q psy10063        442 --------RELESISGHAKEPINDMQFSKDATMFITASHSQ----A----------------VEPINDMQFSKDAT-MFI  492 (894)
Q Consensus       442 --------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~----~----------------i~~V~~l~~spdg~-~L~  492 (894)
                              +.+..+..|.. .|.+++|+|++++|++++.+.    .                ...|.+++|+|+++ +|+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  177 (615)
T 1pgu_A           99 KESNSVEVNVKSEFQVLAG-PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSM  177 (615)
T ss_dssp             GGGTEEEEEEEEEEECCSS-CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred             cccccccccccchhhcccc-cEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEE
Confidence                    77888888888 999999999999999998772    1                25899999999998 899


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeC-CC---CeeEEEEcCC-CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTT-ER---PVNSAALSPI-LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA  567 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~-~~---~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~  567 (894)
                      +++.|+.|+|||++.++++..+.. ..   .|.+++|+|+ +++|++++.++.              |++||+..++.+.
T Consensus       178 ~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--------------i~vwd~~~~~~~~  243 (615)
T 1pgu_A          178 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK--------------ISCFDGKSGEFLK  243 (615)
T ss_dssp             EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC--------------EEEEETTTCCEEE
T ss_pred             EEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe--------------EEEEECCCCCEeE
Confidence            999999999999999999999885 45   7999999999 999999999987              8999999999999


Q ss_pred             Ec-c---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC--------CCceeeeEECcCCcEE--EecCCeE
Q psy10063        568 RI-K---GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE--------GSFTSSSTQQPDGLVY--PSQGGHI  633 (894)
Q Consensus       568 ~l-~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~--------~~~v~~~~~spdg~~l--~~~~g~i  633 (894)
                      .+ .   +|...|.+++|+ ++++|++++.||.|++||++.++.+..        ...+..+.+. ++..+  ...+|.+
T Consensus       244 ~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i  321 (615)
T 1pgu_A          244 YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTL  321 (615)
T ss_dssp             ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCE
T ss_pred             EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCE
Confidence            98 6   899999999999 999999999999999999998764421        1344556664 44444  4556666


Q ss_pred             EEEecccCC------CCC--------CCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063        634 HSLSSHSTS------STD--------TGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK  699 (894)
Q Consensus       634 ~~~~~~~~~------~~d--------~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~  699 (894)
                      ..|......      ...        .. +++++  .++.+++|+..       .+...+.+....+...+....+....
T Consensus       322 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~-l~~~~--~dg~i~~w~~~-------~~~~~~~~~v~~~~~~~~~~l~~~~~  391 (615)
T 1pgu_A          322 NFYELGHDEVLKTISGHNKGITALTVNP-LISGS--YDGRIMEWSSS-------SMHQDHSNLIVSLDNSKAQEYSSISW  391 (615)
T ss_dssp             EEEETTEEEEEEEECCCSSCEEEEETTT-TEEEE--TTSCEEETTTT-------EEECCCCSCEEEEECCSTTCCEEEET
T ss_pred             EEEECCCCcEEEEEeCCCCCEEEEEecC-cEEEC--CCCeEEEEEch-------hhcCcccCceEEEEECCCcEEEEEeC
Confidence            665532100      000        00 55555  68899999866       11123333333322222333333333


Q ss_pred             CcceeEEe----------eeEEEcCCCCEEEecccCccccccC---------------------Ccceeeccc-cCcccc
Q psy10063        700 DEQIEMAR----------NRMSINHSGTRLHVNPFDEQQSVDA---------------------SPLMTWGHI-EGTPFK  747 (894)
Q Consensus       700 ~~~~~~~~----------~~~~~s~~g~~l~v~~~~~~~~~~~---------------------~~l~~~~~~-~g~~~~  747 (894)
                      ++.+..+.          ..+.+++++..++............                     ..+.+.+.. ++.+..
T Consensus       392 d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~  471 (615)
T 1pgu_A          392 DDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQV  471 (615)
T ss_dssp             TTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEE
T ss_pred             CCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEE
Confidence            33333221          2344555555444421111000000                     111111222 333222


Q ss_pred             cCC--CCc--ceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----cCCCceEeec----------
Q psy10063        748 LDG--SDT--PILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL----LSCPDFLFDF----------  809 (894)
Q Consensus       748 ~dg--~~~--~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~----~~~~~~~fS~----------  809 (894)
                      ++-  ...  ..+.+|...|.+++|+|++++|++++.|+.|++|++..++.+..+.    ..+..++|+|          
T Consensus       472 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~  551 (615)
T 1pgu_A          472 FKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEI  551 (615)
T ss_dssp             EETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CC
T ss_pred             EECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccccccc
Confidence            221  111  3456789999999999999999999999999999999988876543    3455788999          


Q ss_pred             CCCeEEEEecCCCCceeEEEeecCCc-ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        810 DTTREVTTTSTKVGKFDARFYHLIFE-EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       810 dg~~l~~as~d~~g~~~I~vwd~~tg-~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      ++++|++++.++    .|+|||+..+ +++..+.+|.+.|.+|+|+||++ |++++.||.|+||+++.
T Consensus       552 ~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          552 EEDLVATGSLDT----NIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             SCCEEEEEETTS----CEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred             CCCEEEEEcCCC----cEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence            999999999987    5999999998 78899999999999999999999 99999999999999975

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.9e-40  Score=429.71  Aligned_cols=472  Identities=14%  Similarity=0.162  Sum_probs=358.4

Q ss_pred             CCccceeeeeccCccEEEecCCC-e----------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-V----------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-~----------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      +......++|++||++|+.++.+ .          ....+.+|.+.|.+++|+|+|++|++|+.||.|+|||+.+++++.
T Consensus       614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~  693 (1249)
T 3sfz_A          614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH  693 (1249)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence            33455667899999999876542 2          233678899999999999999999999999999999999999999


Q ss_pred             EecCCCCCCeeEEEEcC--CCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEEEc
Q psy10063        446 SISGHAKEPINDMQFSK--DATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFTT  505 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~sp--dg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl  505 (894)
                      .+.+|.. .|.+++|++  ++.+|++++.|+.+                  ..|.+++|+|++++|++++.||.|++||+
T Consensus       694 ~~~~~~~-~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~  772 (1249)
T 3sfz_A          694 TYDEHSE-QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV  772 (1249)
T ss_dssp             EEECCSS-CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred             EEcCCCC-cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence            9999998 999999999  56689999998876                  57999999999999999999999999999


Q ss_pred             CCCcEEEEEeCC--------------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc---------------------
Q psy10063        506 HDRQLLKTYTTE--------------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKV---------------------  550 (894)
Q Consensus       506 ~~~~~~~~~~~~--------------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~---------------------  550 (894)
                      +.++....+...              ..+.+++|+|+|++|++++ ++.+.+|......                     
T Consensus       773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~  851 (1249)
T 3sfz_A          773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY  851 (1249)
T ss_dssp             GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred             CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence            988877766421              2566777777777777766 4556666543211                     


Q ss_pred             --------ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---------------
Q psy10063        551 --------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD---------------  607 (894)
Q Consensus       551 --------~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~---------------  607 (894)
                              ....|++||+..+..+..+.+|...|.+++|+|+|++|++++.||.|++|++.....               
T Consensus       852 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~  931 (1249)
T 3sfz_A          852 DHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQ  931 (1249)
T ss_dssp             TTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEc
Confidence                    011389999999999999999999999999999999999999999999999753210               


Q ss_pred             --------------------------ccCCCceeeeEECcCCcEE--EecCCeEEEEecccCC-----------------
Q psy10063        608 --------------------------ISEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTS-----------------  642 (894)
Q Consensus       608 --------------------------~~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~-----------------  642 (894)
                                                ......+..++++|+|.++  ...+|.+..|......                 
T Consensus       932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 1011 (1249)
T 3sfz_A          932 ENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQF 1011 (1249)
T ss_dssp             TTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEE
T ss_pred             CCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEE
Confidence                                      0123457788999999877  4556666666542211                 


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE----------------
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA----------------  706 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~----------------  706 (894)
                      .+++..+++++  .++.+++|+.......   ....+.+....+........+....++.+..+                
T Consensus      1012 s~dg~~l~s~~--~dg~i~vwd~~~~~~~---~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 1086 (1249)
T 3sfz_A         1012 TADGKTLISSS--EDSVIQVWNWQTGDYV---FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQG 1086 (1249)
T ss_dssp             CSSSSCEEEEC--SSSBEEEEETTTTEEE---CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSS
T ss_pred             CCCCCEEEEEc--CCCEEEEEECCCCceE---EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCC
Confidence            24666777777  7889999987654321   11122222222222222222222233322222                


Q ss_pred             -eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEE
Q psy10063        707 -RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSE  785 (894)
Q Consensus       707 -~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~  785 (894)
                       ...+.++++|..++.+..++       .+++|+...       +.....+.+|...|.+++|+|++++||+++.||.|+
T Consensus      1087 ~v~~~~~s~d~~~l~s~s~d~-------~v~iwd~~~-------~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~ 1152 (1249)
T 3sfz_A         1087 TVLSCAISSDATKFSSTSADK-------TAKIWSFDL-------LSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIR 1152 (1249)
T ss_dssp             CCCCEEECSSSSSCEEECCSS-------CCCEECSSS-------SSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCC
T ss_pred             cEEEEEECCCCCEEEEEcCCC-------cEEEEECCC-------cceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence             13356667776666655443       366665443       334456778999999999999999999999999999


Q ss_pred             EEEccCCceeec------------cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEE
Q psy10063        786 RYRDRKNKATAG------------FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF  853 (894)
Q Consensus       786 iwd~~~~~~~~~------------~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~f  853 (894)
                      +||+..++.+..            +...+..++|++||+++++++  +    .|++||+.+++++..+.+|...|.+++|
T Consensus      1153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g----~v~vwd~~~g~~~~~~~~~~~~i~~~~~ 1226 (1249)
T 3sfz_A         1153 IWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--G----YLKWWNVATGDSSQTFYTNGTNLKKIHV 1226 (1249)
T ss_dssp             EEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--S----SEEEBCSSSCBCCCCCCCSSCCCCCCEE
T ss_pred             EEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--C----eEEEEECCCCceeeeeeccCCcccEEEE
Confidence            999998876543            334567889999999999875  2    5999999999999999999999999999


Q ss_pred             eeCCcEEEEecCCCcEEEEecC
Q psy10063        854 HPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       854 Spdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      +|||++|++++.||.|+||++.
T Consensus      1227 s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A         1227 SPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp             CSSSCCEEEECTTCCEEEECCC
T ss_pred             CCCCCEEEEecCCcEEEEEeec
Confidence            9999999999999999999984

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-40  Score=412.81  Aligned_cols=444  Identities=11%  Similarity=0.039  Sum_probs=313.3

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------  476 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------  476 (894)
                      ....+|.+.|.+|+|+|++++||+|+.||.|+||+...++++..+. |.. .|.+|+|+| |++|++++.|+.+      
T Consensus        11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~-~V~~l~fsp-g~~L~S~s~D~~v~lWd~~   87 (902)
T 2oaj_A           11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRS-AIKEMRFVK-GIYLVVINAKDTVYVLSLY   87 (902)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCC-CEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred             ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCC-CEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence            3556899999999999999999999999999999999888766654 655 899999999 8899999999877      


Q ss_pred             -----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE-E----------e-CCCCeeEEEEcCCC-CEE
Q psy10063        477 -----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT-Y----------T-TERPVNSAALSPIL-PHV  532 (894)
Q Consensus       477 -----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~-~----------~-~~~~v~~l~~spdg-~~l  532 (894)
                                 ..|.+++|+|++++|++|+.||.|+|||++.+++... +          . |.+.|.+++|+|++ ..|
T Consensus        88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l  167 (902)
T 2oaj_A           88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV  167 (902)
T ss_dssp             TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred             CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence                       4689999999999999999999999999998886421 1          1 45789999999964 678


Q ss_pred             EEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC------------------CCCeEEEEEecCCCEEEEEeCC
Q psy10063        533 VLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH------------------FGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       533 ~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h------------------~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      ++++.++.              | +||++.+++++.+.+|                  ...|.+++|+|+|++|++|+.|
T Consensus       168 ~~g~~dg~--------------v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D  232 (902)
T 2oaj_A          168 LISYEYVT--------------L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED  232 (902)
T ss_dssp             EEECSSCE--------------E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred             EEEeCCCc--------------E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence            88887775              7 9999988888877665                  5789999999999999999999


Q ss_pred             CcEEEEECCCCcccc---------C-------------CCceeeeEEC----cCC-cEEEec--C-----CeEEEEecc-
Q psy10063        595 GFLISNTLSNGLDIS---------E-------------GSFTSSSTQQ----PDG-LVYPSQ--G-----GHIHSLSSH-  639 (894)
Q Consensus       595 g~I~vwdl~~~~~~~---------~-------------~~~v~~~~~s----pdg-~~l~~~--~-----g~i~~~~~~-  639 (894)
                      |.|+|||++.++.+.         +             ...+..++|+    |++ .++++.  +     ..+..|... 
T Consensus       233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~  312 (902)
T 2oaj_A          233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY  312 (902)
T ss_dssp             CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred             CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence            999999998876432         1             2257788884    443 344332  1     134444310 


Q ss_pred             -------------------------cC---------------CC-----CCCCeeeeccccCCCceEEechhhHHHhhh-
Q psy10063        640 -------------------------ST---------------SS-----TDTGGVFSGSRVDDSGVELTKDEQIEMARN-  673 (894)
Q Consensus       640 -------------------------~~---------------~~-----~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~-  673 (894)
                                               ..               .+     .+...++.++  .++.+++|+......... 
T Consensus       313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s--~dg~l~~~~~~~g~~~~~~  390 (902)
T 2oaj_A          313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLIL--GNGEIETMLYPSGIFTDKA  390 (902)
T ss_dssp             CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEE--TTSCEEEEETTTCCEECCG
T ss_pred             CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEc--CCCcEEEEECCCCCccccc
Confidence                                     00               00     1122333333  467788887532210000 


Q ss_pred             ---c-ccccCCCCeEEeeccC-------------CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce
Q psy10063        674 ---R-MSINHSGTRLHVNPFD-------------EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM  736 (894)
Q Consensus       674 ---~-~~~~~~g~~~~~~~~~-------------~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~  736 (894)
                         . ....+......+....             ......+. .  .......++++++|..++.+..|+.       ++
T Consensus       391 ~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~-G--~~~~v~sv~~spdg~~laSgs~Dgt-------Vr  460 (902)
T 2oaj_A          391 SLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK-G--GVRTKRQKLPAEYGTAFITGHSNGS-------VR  460 (902)
T ss_dssp             GGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC-C--SBCCCCCCCCCSEEEEEEEEETTSE-------EE
T ss_pred             ccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc-C--CcCCCCcccccccCcEEEEecCCCc-------EE
Confidence               0 0000111110000000             00000000 0  0011123456777888877766654       78


Q ss_pred             eeccccCcccccCCCCcce-e-----cCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce----------------
Q psy10063        737 TWGHIEGTPFKLDGSDTPI-L-----AGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA----------------  794 (894)
Q Consensus       737 ~~~~~~g~~~~~dg~~~~~-~-----~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~----------------  794 (894)
                      +|+...+.+...  ..+.+ +     .+|...|.+|+|+||+++||+|+.||.|+||++...+.                
T Consensus       461 lWd~~~g~~~~~--~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~  538 (902)
T 2oaj_A          461 IYDASHGDIQDN--ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNF  538 (902)
T ss_dssp             EEESSCCTTTTT--BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------C
T ss_pred             EEECCCccccCC--ceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceee
Confidence            887766632110  00000 1     27889999999999999999999999999999876521                


Q ss_pred             --------------------------------eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee---
Q psy10063        795 --------------------------------TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA---  839 (894)
Q Consensus       795 --------------------------------~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~---  839 (894)
                                                      +..+...+..++||||| +|++++.|+    .|+|||++.++++.   
T Consensus       539 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~----tv~lwd~~~~~~~~~~~  613 (902)
T 2oaj_A          539 RRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAG----SLMLIDRRGPAIIYMEN  613 (902)
T ss_dssp             CSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTS----EEEEEETTTTEEEEEEE
T ss_pred             eeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCC----cEEEEECCCCeEEEEee
Confidence                                            22334456688899999 999999987    69999998876653   


Q ss_pred             --ecc-CCCCCeeEEEEe-----eCC---cEEEEecCCCcEEEEec---Ccccccccc
Q psy10063        840 --RIK-GHFGPINSLAFH-----PDG---KSYASGGEDGFVRLHTF---DQAYFDYTF  883 (894)
Q Consensus       840 --~l~-gH~~~V~~l~fS-----pdg---~~LaS~s~Dg~V~vWdl---~~~~~~~~~  883 (894)
                        .+. +|.+.|++|+|+     |||   ++|++|+.||.|++|++   ..+++...|
T Consensus       614 ~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~  671 (902)
T 2oaj_A          614 IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQL  671 (902)
T ss_dssp             GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEE
T ss_pred             hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEe
Confidence              454 999999999999     886   89999999999999999   666655544

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.1e-40  Score=376.78  Aligned_cols=302  Identities=15%  Similarity=0.199  Sum_probs=248.5

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ...+.+|.+.|.+++|+|++++|++|+.||.|+|||+.+++.++.+.+|.+                         .|.+
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-------------------------~V~~  155 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-------------------------SVQD  155 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSS-------------------------CEEE
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCC-------------------------cEEE
Confidence            346789999999999999999999999999999999999999999999988                         7888


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      |+|+|++++|++|+.|+.|+|||+..++++..+.. ...|.+++|+|++.+|++++.|+.              |++||+
T Consensus       156 v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~--------------i~~wd~  221 (410)
T 1vyh_C          156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT--------------IKMWEV  221 (410)
T ss_dssp             EEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSE--------------EEEEET
T ss_pred             EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe--------------EEEEEC
Confidence            89999999999999999999999999999988874 578999999999999999999997              899999


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +.++++..+.+|...|.+++|+++|.+|++|+.||.|++||+..++...    +...+.+++|+|++             
T Consensus       222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-------------  288 (410)
T 1vyh_C          222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPES-------------  288 (410)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC-------------
T ss_pred             CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcc-------------
Confidence            9999999999999999999999999999999999999999997654221    01111111111110             


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       289 --------------------------------------------------------------------------------  288 (410)
T 1vyh_C          289 --------------------------------------------------------------------------------  288 (410)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA  796 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~  796 (894)
                      ....+                        ....+.            ........+.+|++|+.|+.|++||+..++.+.
T Consensus       289 ~~~~~------------------------~~~~~~------------~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~  332 (410)
T 1vyh_C          289 SYSSI------------------------SEATGS------------ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM  332 (410)
T ss_dssp             GGGGG------------------------GGCCSC------------C-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred             cccch------------------------hhhccc------------cccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence            00000                        000000            001112357899999999999999999888765


Q ss_pred             cc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        797 GF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       797 ~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      .+   ...+..++|+++|++|++++.|+    .|+|||+..++++..+.+|...|.+|+|+|++.+||+|+.||.|+||+
T Consensus       333 ~~~~h~~~v~~v~~~~~g~~l~s~s~D~----~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~  408 (410)
T 1vyh_C          333 TLVGHDNWVRGVLFHSGGKFILSCADDK----TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  408 (410)
T ss_dssp             EEECCSSCEEEEEECSSSSCEEEEETTT----EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEECCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            44   33455788999999999999887    699999999999999999999999999999999999999999999998


Q ss_pred             cC
Q psy10063        874 FD  875 (894)
Q Consensus       874 l~  875 (894)
                      +.
T Consensus       409 ~r  410 (410)
T 1vyh_C          409 CR  410 (410)
T ss_dssp             --
T ss_pred             CC
Confidence            63

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=8.5e-40  Score=361.91  Aligned_cols=285  Identities=14%  Similarity=0.238  Sum_probs=252.4

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ..+..|.+|.+.|.+++|+||+++|++|+.||.|+|||+.+++.+..+..|..                         .|
T Consensus        46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-------------------------~v  100 (340)
T 1got_B           46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS-------------------------WV  100 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSS-------------------------CE
T ss_pred             hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCc-------------------------cE
Confidence            45668899999999999999999999999999999999999999999998887                         78


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCc----EEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQ----LLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .+++|+|+|++|++|+.|+.|+|||+..++    ....+. |.+.|.+++|++++. |++++.++.              
T Consensus       101 ~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~--------------  165 (340)
T 1got_B          101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTT--------------  165 (340)
T ss_dssp             EEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSC--------------
T ss_pred             EEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCc--------------
Confidence            888899999999999999999999998753    444454 468899999998875 888888887              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      |++||+..++.+..+.+|.+.|.+++|+|++++|++|+.||.|++||++.++.+                          
T Consensus       166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~--------------------------  219 (340)
T 1got_B          166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR--------------------------  219 (340)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE--------------------------
T ss_pred             EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeE--------------------------
Confidence            899999999999999999999999999999999999999999999998643210                          


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                                                                                                      
T Consensus       220 --------------------------------------------------------------------------------  219 (340)
T 1got_B          220 --------------------------------------------------------------------------------  219 (340)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                             ..+.+|...|.+++|+|++.+|++|+.|+.|+|||++..+.
T Consensus       220 ---------------------------------------~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~  260 (340)
T 1got_B          220 ---------------------------------------QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE  260 (340)
T ss_dssp             ---------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             ---------------------------------------EEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence                                                   01234677899999999999999999999999999998876


Q ss_pred             eecccc-----CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        795 TAGFLL-----SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       795 ~~~~~~-----~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      +..+..     .+..++|+++|+++++++.++    .|+|||+..++++..+.+|.+.|.+|+|+|||++||+||.||.|
T Consensus       261 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i  336 (340)
T 1got_B          261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL  336 (340)
T ss_dssp             EEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred             EEEEccCCcccceEEEEECCCCCEEEEECCCC----eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccE
Confidence            554332     345778999999999999887    69999999999999999999999999999999999999999999


Q ss_pred             EEEe
Q psy10063        870 RLHT  873 (894)
Q Consensus       870 ~vWd  873 (894)
                      +||+
T Consensus       337 ~iWd  340 (340)
T 1got_B          337 KIWN  340 (340)
T ss_dssp             EEEC
T ss_pred             EecC
Confidence            9996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.2e-40  Score=359.50  Aligned_cols=288  Identities=18%  Similarity=0.215  Sum_probs=252.3

Q ss_pred             eEEEEEecCCCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .+...+++|.+.|.+|+|+++    +++|++|+.|+.|+|||+..++.  ...+.+|..                     
T Consensus        23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~---------------------   81 (321)
T 3ow8_A           23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL---------------------   81 (321)
T ss_dssp             EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS---------------------
T ss_pred             heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC---------------------
Confidence            344567799999999999985    56999999999999999987764  456788887                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                          .|.+++|++++.+|++++.|+.|+|||+++++++..+.. ...+.+++|+|++++|++++.++.            
T Consensus        82 ----~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~------------  145 (321)
T 3ow8_A           82 ----GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK------------  145 (321)
T ss_dssp             ----CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSE------------
T ss_pred             ----CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCc------------
Confidence                788888899999999999999999999999999988875 578999999999999999999986            


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                        |++|+++.++.+..+..|...|.+++|+|+|++|++|+.||.|++||++.++.+                        
T Consensus       146 --v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~------------------------  199 (321)
T 3ow8_A          146 --VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL------------------------  199 (321)
T ss_dssp             --EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE------------------------
T ss_pred             --EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE------------------------
Confidence              899999999999999999999999999999999999999999999998654210                        


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                                                                                                      
T Consensus       200 --------------------------------------------------------------------------------  199 (321)
T 3ow8_A          200 --------------------------------------------------------------------------------  199 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCC
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKN  792 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~  792 (894)
                                                               ..+.+|...|.+++|+|++++|++++.|+.|+|||++..
T Consensus       200 -----------------------------------------~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~  238 (321)
T 3ow8_A          200 -----------------------------------------HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA  238 (321)
T ss_dssp             -----------------------------------------EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred             -----------------------------------------EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence                                                     012346667889999999999999999999999999988


Q ss_pred             ceeecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        793 KATAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       793 ~~~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      +.+..+   ...+..++|+|++.+|++++.|+    .|+|||+..++++..+.+|.+.|.+|+|+++|++|++++.||.|
T Consensus       239 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~----~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i  314 (321)
T 3ow8_A          239 NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK----SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI  314 (321)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred             ceeEEEcCCCCceEEEEECCCCCEEEEEeCCC----cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence            765443   34455788999999999999988    59999999999999999999999999999999999999999999


Q ss_pred             EEEecC
Q psy10063        870 RLHTFD  875 (894)
Q Consensus       870 ~vWdl~  875 (894)
                      +|||+.
T Consensus       315 ~vwd~p  320 (321)
T 3ow8_A          315 HIYDCP  320 (321)
T ss_dssp             EEEECC
T ss_pred             EEEeCC
Confidence            999973

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=3.5e-39  Score=417.93  Aligned_cols=460  Identities=16%  Similarity=0.184  Sum_probs=347.0

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----  476 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----  476 (894)
                      ..+.+.+|.+.|.+++|+|+|++|++|+.||.|+|||+.+++.+..+.+|.. .|.+++|+|+|++|++++.|+.+    
T Consensus       607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~vwd  685 (1249)
T 3sfz_A          607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED-EVLCCAFSSDDSYIATCSADKKVKIWD  685 (1249)
T ss_dssp             CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC-CEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            3456889999999999999999999999999999999999999999999998 99999999999999999999877    


Q ss_pred             --------------cceEEEEEec--CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063        477 --------------EPINDMQFSK--DATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       477 --------------~~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                                    ..|.+++|++  ++.+|++|+.||.|++||++.++++..+.. ...|.+++|+|++++|++++.++
T Consensus       686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg  765 (1249)
T 3sfz_A          686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG  765 (1249)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred             CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence                          5899999999  566899999999999999999999988874 68899999999999999999999


Q ss_pred             CeEEEeccCccc----------------------------------------eeeEEEEeccccceEEEcc-CCCCCeEE
Q psy10063        540 AREVTTTSTKVG----------------------------------------KFDARFYHLIFEEEFARIK-GHFGPINS  578 (894)
Q Consensus       540 ~~~v~~~~~~~~----------------------------------------~~~v~vwd~~~~~~~~~l~-~h~~~V~~  578 (894)
                      .+.+|+......                                        .-.+.+||+..+..+..+. +|...|.+
T Consensus       766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~  845 (1249)
T 3sfz_A          766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQY  845 (1249)
T ss_dssp             EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCE
T ss_pred             eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEE
Confidence            999998753310                                        0137899999988887775 89999999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEECCCCccc----cCCCceeeeEECcCCcEE--EecCCeEEEEecccCCCC--------
Q psy10063        579 LAFHPDGKSYASGGEDGFLISNTLSNGLDI----SEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTSST--------  644 (894)
Q Consensus       579 l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~----~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~~~--------  644 (894)
                      ++|+|++++|++++.||.|++|++..+..+    .+...+..++|+|+|..+  .+.+|.+..|........        
T Consensus       846 ~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~  925 (1249)
T 3sfz_A          846 CDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQE  925 (1249)
T ss_dssp             EEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEE
T ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccce
Confidence            999999999999999999999999987654    346678899999999877  455677777764211000        


Q ss_pred             -------CCCeeeeccccCCCceEEechhhHHHh------hhcccccCCCCeEEeeccCCcceeEeccCcc-------ee
Q psy10063        645 -------DTGGVFSGSRVDDSGVELTKDEQIEMA------RNRMSINHSGTRLHVNPFDEQQSVELTKDEQ-------IE  704 (894)
Q Consensus       645 -------d~~~i~sgs~~~d~~i~l~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~-------~~  704 (894)
                             ....++...  ....+.++........      ...+.+...+..+.+...++...+.-...+.       ..
T Consensus       926 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~ 1003 (1249)
T 3sfz_A          926 IDVVFQENETMVLAVD--NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK 1003 (1249)
T ss_dssp             EEEEEETTEEEEEEEE--SSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCS
T ss_pred             eeEEEcCCCcEEEEec--CCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCC
Confidence                   000000000  1111111111000000      0001111122222111111111110000000       11


Q ss_pred             EEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcE
Q psy10063        705 MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVS  784 (894)
Q Consensus       705 ~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I  784 (894)
                      .....+.++++|..++.+..++       .+.+|+...+...        .+.+|...|.+++|++++ .|++++.|+.|
T Consensus      1004 ~~v~~l~~s~dg~~l~s~~~dg-------~i~vwd~~~~~~~--------~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v 1067 (1249)
T 3sfz_A         1004 KAVRHIQFTADGKTLISSSEDS-------VIQVWNWQTGDYV--------FLQAHQETVKDFRLLQDS-RLLSWSFDGTV 1067 (1249)
T ss_dssp             SCCCCEEECSSSSCEEEECSSS-------BEEEEETTTTEEE--------CCBCCSSCEEEEEECSSS-EEEEEESSSEE
T ss_pred             CceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCceE--------EEecCCCcEEEEEEcCCC-cEEEEECCCcE
Confidence            1224467788888777765544       3677765544322        345788999999999965 67888999999


Q ss_pred             EEEEccCCceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEE
Q psy10063        785 ERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA  861 (894)
Q Consensus       785 ~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~La  861 (894)
                      ++||+..++.+..   +...+..++|+++++++++++.++    .|+|||+..++++..+.+|.+.|.+++|+|||++||
T Consensus      1068 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~----~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~la 1143 (1249)
T 3sfz_A         1068 KVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK----TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1143 (1249)
T ss_dssp             EEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS----CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEE
T ss_pred             EEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC----cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEE
Confidence            9999988876443   445567889999999999999987    599999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCcccccccc
Q psy10063        862 SGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       862 S~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      +++.||.|+||++..++.+..+
T Consensus      1144 t~~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A         1144 TGDDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp             EEETTSCCCEEESSSSCCCCCC
T ss_pred             EEeCCCEEEEEECCCCceEEEe
Confidence            9999999999999988876654

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.3e-38  Score=346.68  Aligned_cols=289  Identities=16%  Similarity=0.220  Sum_probs=246.8

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ++..|.+|.+.|.+|+|+|++++|++|+.||.|+|||+.+++.++.+..|..                         .|.
T Consensus         5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-------------------------~v~   59 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-------------------------PVR   59 (304)
T ss_dssp             CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------------------------CEE
T ss_pred             eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-------------------------cEE
Confidence            4567889999999999999999999999999999999999999999999987                         788


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +++|++++++|++|+.|+.|+|||+++++++..+.. ...|.+++|+|++++|++++.|+.              |++||
T Consensus        60 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~--------------v~lWd  125 (304)
T 2ynn_A           60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT--------------VKLWN  125 (304)
T ss_dssp             EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--------------EEEEE
T ss_pred             EEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCe--------------EEEEE
Confidence            889999999999999999999999999999988875 588999999999999999999997              89999


Q ss_pred             cccc-ceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        560 LIFE-EEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       560 ~~~~-~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      ++.+ .....+.+|...|.+++|+| ++.+|++|+.||.|++||+.......                            
T Consensus       126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~----------------------------  177 (304)
T 2ynn_A          126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF----------------------------  177 (304)
T ss_dssp             GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE----------------------------
T ss_pred             CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc----------------------------
Confidence            9877 45567889999999999999 67899999999999999985432100                            


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (304)
T 2ynn_A          178 --------------------------------------------------------------------------------  177 (304)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC--CCCEEEEecCCCcEEEEEccCCcee
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP--KREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp--dg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                          .+..+|...+..++|+|  ++.+|++|+.|+.|+|||++.++++
T Consensus       178 ------------------------------------~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~  221 (304)
T 2ynn_A          178 ------------------------------------TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV  221 (304)
T ss_dssp             ------------------------------------EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred             ------------------------------------eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence                                                00112333455566655  7889999999999999999988775


Q ss_pred             ecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc--EEEEecCCCcEE
Q psy10063        796 AGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK--SYASGGEDGFVR  870 (894)
Q Consensus       796 ~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~--~LaS~s~Dg~V~  870 (894)
                      ..+   ...+..++|+|++.+|++++.|+    .|+|||+.+++++..+..|...|++++|+|++.  +|++|+.|| +.
T Consensus       222 ~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg----~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~  296 (304)
T 2ynn_A          222 ATLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FT  296 (304)
T ss_dssp             EEEECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EE
T ss_pred             eeeCCCCCCEEEEEECCCCCEEEEEcCCC----eEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eE
Confidence            544   34455678999999999999998    599999999999999999999999999999885  578887666 77


Q ss_pred             EEecCcc
Q psy10063        871 LHTFDQA  877 (894)
Q Consensus       871 vWdl~~~  877 (894)
                      +|++..+
T Consensus       297 ~~~~~~~  303 (304)
T 2ynn_A          297 VLSLGND  303 (304)
T ss_dssp             EEECC--
T ss_pred             EEEeccC
Confidence            8888754

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=8.6e-39  Score=355.97  Aligned_cols=286  Identities=13%  Similarity=0.217  Sum_probs=251.0

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      .....|.+|.+.|.+|+|+|++++|++|+.||.|+|||+.+++....+..|..                         .|
T Consensus        55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~-------------------------~v  109 (354)
T 2pbi_B           55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCT-------------------------WV  109 (354)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-------------------------CC
T ss_pred             EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCC-------------------------CE
Confidence            45568899999999999999999999999999999999999999888888876                         68


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCC------cEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDR------QLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~------~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .+++|+|+|.+|++|+.|+.|++|++...      .....+ .|...|.+++|++++.+|++++.++.            
T Consensus       110 ~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~------------  177 (354)
T 2pbi_B          110 MACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT------------  177 (354)
T ss_dssp             CEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE------------
T ss_pred             EEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc------------
Confidence            88888899999999999999999998643      223333 46788999999999999999999997            


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEec--CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHP--DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp--dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~  630 (894)
                        |++||++.++++..+.+|...|.+++|++  +|.+|++|+.||.|++||++.++.+                      
T Consensus       178 --v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~----------------------  233 (354)
T 2pbi_B          178 --CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV----------------------  233 (354)
T ss_dssp             --EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE----------------------
T ss_pred             --EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE----------------------
Confidence              89999999999999999999999999987  5789999999999999998654210                      


Q ss_pred             CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063        631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM  710 (894)
Q Consensus       631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  710 (894)
                                                                                                      
T Consensus       234 --------------------------------------------------------------------------------  233 (354)
T 2pbi_B          234 --------------------------------------------------------------------------------  233 (354)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063        711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR  790 (894)
Q Consensus       711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~  790 (894)
                                                                 ..+.+|...|.+++|+|++.+|++++.|+.|++||++
T Consensus       234 -------------------------------------------~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~  270 (354)
T 2pbi_B          234 -------------------------------------------QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR  270 (354)
T ss_dssp             -------------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             -------------------------------------------EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence                                                       0123477789999999999999999999999999998


Q ss_pred             CCceeeccc-----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecC
Q psy10063        791 KNKATAGFL-----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  865 (894)
Q Consensus       791 ~~~~~~~~~-----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~  865 (894)
                      ..+.+..+.     ..+..++|+++|.++++++.++    .|+|||+..++++..+.+|.+.|.+|+|+|||++||+|+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~  346 (354)
T 2pbi_B          271 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY----TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSW  346 (354)
T ss_dssp             TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred             CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC----cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcC
Confidence            876654332     2345678999999999999887    5999999999999999999999999999999999999999


Q ss_pred             CCcEEEEe
Q psy10063        866 DGFVRLHT  873 (894)
Q Consensus       866 Dg~V~vWd  873 (894)
                      ||.|+||+
T Consensus       347 D~~v~vW~  354 (354)
T 2pbi_B          347 DHTLRVWA  354 (354)
T ss_dssp             TSEEEEEC
T ss_pred             CCCEEecC
Confidence            99999996

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.2e-39  Score=363.08  Aligned_cols=293  Identities=15%  Similarity=0.234  Sum_probs=251.9

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ......|.+|.+.|.+|+|+|++++|++|+.||.|+|||+.+++.+..+.+|..                         .
T Consensus        56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~-------------------------~  110 (380)
T 3iz6_a           56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP-------------------------W  110 (380)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT-------------------------T
T ss_pred             eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC-------------------------C
Confidence            345668999999999999999999999999999999999999999999999987                         7


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCc-------EEEEEe-CCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCc
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQ-------LLKTYT-TERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~-------~~~~~~-~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~  549 (894)
                      |.+++|+|+|++|++|+.|+.|+|||+....       +...+. |.+.|.+++|+|++ .+|++++.|+.         
T Consensus       111 v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~---------  181 (380)
T 3iz6_a          111 VMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT---------  181 (380)
T ss_dssp             CCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC---------
T ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc---------
Confidence            8888899999999999999999999997532       223333 45789999999974 56899999987         


Q ss_pred             cceeeEEEEeccccceEEEc-----cCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063        550 VGKFDARFYHLIFEEEFARI-----KGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDG  623 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~~~~l-----~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg  623 (894)
                           |++||+..++.+..+     .+|...|.+++|++ ++.+|++|+.||.|++||++....                
T Consensus       182 -----i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~----------------  240 (380)
T 3iz6_a          182 -----CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR----------------  240 (380)
T ss_dssp             -----EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC----------------
T ss_pred             -----EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc----------------
Confidence                 899999999888776     67999999999987 889999999999999999853210                


Q ss_pred             cEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcce
Q psy10063        624 LVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQI  703 (894)
Q Consensus       624 ~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~  703 (894)
                                                                                                      
T Consensus       241 --------------------------------------------------------------------------------  240 (380)
T 3iz6_a          241 --------------------------------------------------------------------------------  240 (380)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCc
Q psy10063        704 EMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKV  783 (894)
Q Consensus       704 ~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~  783 (894)
                                                                      ....+.+|.+.|.+++|+|++.+|++|+.|+.
T Consensus       241 ------------------------------------------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~  272 (380)
T 3iz6_a          241 ------------------------------------------------AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT  272 (380)
T ss_dssp             ------------------------------------------------CCEEECCCSSCCCEEEECTTSSEEEEECSSSC
T ss_pred             ------------------------------------------------ceEEECCcCCCeEEEEEecCCCeEEEEcCCCe
Confidence                                                            01123467888999999999999999999999


Q ss_pred             EEEEEccCCceeecccc----------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec----cCCCCCee
Q psy10063        784 SERYRDRKNKATAGFLL----------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI----KGHFGPIN  849 (894)
Q Consensus       784 I~iwd~~~~~~~~~~~~----------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l----~gH~~~V~  849 (894)
                      |+|||++.++.+..+..          .+..++|+++|+++++++.++    .|+|||+..++++..+    .+|.+.|.
T Consensus       273 i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg----~i~vwd~~~~~~~~~~~~~~~~h~~~v~  348 (380)
T 3iz6_a          273 CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG----DCYVWDTLLAEMVLNLGTLQNSHEGRIS  348 (380)
T ss_dssp             EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS----CEEEEETTTCCEEEEECCSCSSCCCCCC
T ss_pred             EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC----CEEEEECCCCceEEEEecccCCCCCceE
Confidence            99999998877554322          246788999999999998887    5999999999888766    68999999


Q ss_pred             EEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        850 SLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      +|+|+|||++|++||.||.|+||++....
T Consensus       349 ~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          349 CLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             EEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             EEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            99999999999999999999999998664

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=5e-38  Score=375.08  Aligned_cols=438  Identities=13%  Similarity=0.115  Sum_probs=327.9

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----eEEEEecCCCCCC-eeEEEEcC--CCCEEEEEeCCCCc--
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----RELESISGHAKEP-INDMQFSK--DATMFITASHSQAV--  476 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----~~~~~l~~h~~~~-V~~v~~sp--dg~~la~~~~d~~i--  476 (894)
                      ..|.+.|.+++|+|||++|++++ ++.|+|||+.++    +.+..+.+|.. . |.+++|+|  ++++|++++.|+.+  
T Consensus        15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~-~~v~~~~~sp~~~~~~l~s~~~dg~v~v   92 (615)
T 1pgu_A           15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGS-SVVTTVKFSPIKGSQYLCSGDESGKVIV   92 (615)
T ss_dssp             CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTT-SCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred             CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCC-ceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence            36899999999999999999998 789999999999    89999999998 8 99999999  99999999988755  


Q ss_pred             ------------------------cceEEEEEecCCCEEEEEECC----CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcC
Q psy10063        477 ------------------------EPINDMQFSKDATMFITASKD----HTAKLFTTHDRQLLKTYTT-ERPVNSAALSP  527 (894)
Q Consensus       477 ------------------------~~V~~l~~spdg~~L~sgs~D----g~V~iwdl~~~~~~~~~~~-~~~v~~l~~sp  527 (894)
                                              ..|.+++|+|++++|++++.+    +.|++||  .++.+..+.. ...|.+++|+|
T Consensus        93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~  170 (615)
T 1pgu_A           93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ  170 (615)
T ss_dssp             EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred             EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence                                    368899999999999999988    6788887  5667777664 58899999999


Q ss_pred             CCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC---CeEEEEEecC-CCEEEEEeCCCcEEEEEC
Q psy10063        528 ILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG---PINSLAFHPD-GKSYASGGEDGFLISNTL  602 (894)
Q Consensus       528 dg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~---~V~~l~~spd-g~~l~sgs~Dg~I~vwdl  602 (894)
                      +++ +|++++.++.              |++||+..++.+..+.+|..   .|.+++|+|+ +++|++++.||.|++||+
T Consensus       171 ~~~~~l~~~~~d~~--------------v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~  236 (615)
T 1pgu_A          171 SRPMRSMTVGDDGS--------------VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG  236 (615)
T ss_dssp             SSSCEEEEEETTTE--------------EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred             CCCcEEEEEeCCCc--------------EEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence            998 7888888886              89999999999999999999   9999999999 999999999999999999


Q ss_pred             CCCccc--------cCCCceeeeEECcCCcEE--EecCCeEEEEecccCC------C--------------CCCCeeeec
Q psy10063        603 SNGLDI--------SEGSFTSSSTQQPDGLVY--PSQGGHIHSLSSHSTS------S--------------TDTGGVFSG  652 (894)
Q Consensus       603 ~~~~~~--------~~~~~v~~~~~spdg~~l--~~~~g~i~~~~~~~~~------~--------------~d~~~i~sg  652 (894)
                      +.++.+        .+...+..+.|+ ++.++  ...+|.+..|......      .              +++..++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  315 (615)
T 1pgu_A          237 KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL  315 (615)
T ss_dssp             TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEE
T ss_pred             CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEE
Confidence            887633        345678889999 88777  4446777777653211      0              134455666


Q ss_pred             cccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe------------eeEEEcCCCCEEE
Q psy10063        653 SRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR------------NRMSINHSGTRLH  720 (894)
Q Consensus       653 s~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~------------~~~~~s~~g~~l~  720 (894)
                      +  .++.+++|+.......  .....+.+....+..  .. .+....++.+..+.            ..+.+ .++..++
T Consensus       316 ~--~~g~i~~~d~~~~~~~--~~~~~~~~~v~~~~~--~~-l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~  387 (615)
T 1pgu_A          316 S--LDGTLNFYELGHDEVL--KTISGHNKGITALTV--NP-LISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYS  387 (615)
T ss_dssp             E--TTSCEEEEETTEEEEE--EEECCCSSCEEEEET--TT-TEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCE
T ss_pred             E--CCCCEEEEECCCCcEE--EEEeCCCCCEEEEEe--cC-cEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEE
Confidence            5  6888999886542221  111123332222222  11 23333333332221            12233 2233333


Q ss_pred             ecccCccccccCCcceeeccccCc--------------------------cccc-CCCCcceecCCCCceEEEeeCCCCC
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGT--------------------------PFKL-DGSDTPILAGPVDIGFKMPEPPKRE  773 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~--------------------------~~~~-dg~~~~~~~~h~~~v~~la~spdg~  773 (894)
                      ....++       .+.+|+...+.                          ++.. .++....+ .|...+.+++|+  ++
T Consensus       388 ~~~~d~-------~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~  457 (615)
T 1pgu_A          388 SISWDD-------TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV-RLNSPGSAVSLS--QN  457 (615)
T ss_dssp             EEETTT-------EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEEC--SS
T ss_pred             EEeCCC-------CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeec-ccCCCceEEEEc--CC
Confidence            332222       23444332211                          1111 22222222 367789999999  89


Q ss_pred             EEEEecC-CCcEEEEEccCCcee----eccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-CCCC
Q psy10063        774 KLALALA-DKVSERYRDRKNKAT----AGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-HFGP  847 (894)
Q Consensus       774 ~Latgs~-Dg~I~iwd~~~~~~~----~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-H~~~  847 (894)
                      +|++++. |+.|++|++...+..    ..+...+..++|++++++|++++.++    .|+|||+..++++..+.+ |...
T Consensus       458 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~h~~~  533 (615)
T 1pgu_A          458 YVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMG----KILLYDLQSREVKTSRWAFRTSK  533 (615)
T ss_dssp             EEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTTTEEEECCSCCCSSC
T ss_pred             EEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCC----eEEEeeCCCCcceeEeecCCCCc
Confidence            9999999 999999999887654    22334455788999999999999987    599999999999999998 9999


Q ss_pred             eeEEEEee----------CCcEEEEecCCCcEEEEecCcc-ccccccc
Q psy10063        848 INSLAFHP----------DGKSYASGGEDGFVRLHTFDQA-YFDYTFD  884 (894)
Q Consensus       848 V~~l~fSp----------dg~~LaS~s~Dg~V~vWdl~~~-~~~~~~~  884 (894)
                      |.+|+|+|          ++++||+++.||.|+||+++.+ +++..+.
T Consensus       534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  581 (615)
T 1pgu_A          534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN  581 (615)
T ss_dssp             EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT
T ss_pred             eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh
Confidence            99999999          9999999999999999999987 4555443

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.5e-38  Score=345.70  Aligned_cols=288  Identities=17%  Similarity=0.204  Sum_probs=246.6

Q ss_pred             eEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCC-----CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRM-----GRELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~t-----g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .++..|.+|.+.|.+|+|+|++ ++|++|+.|+.|+||++..     +..++.+.+|..                     
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~---------------------   66 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH---------------------   66 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS---------------------
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcc---------------------
Confidence            3455789999999999999965 7999999999999999863     345778888887                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                          .|.+++|+++|++|++|+.|+.|+|||++++++++.+.+ ...|.+++|++++.+|++++.|+.            
T Consensus        67 ----~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~------------  130 (319)
T 3frx_A           67 ----IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT------------  130 (319)
T ss_dssp             ----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC------------
T ss_pred             ----cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe------------
Confidence                788899999999999999999999999999999988874 688999999999999999999997            


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecC------CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEE
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPD------GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd------g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l  626 (894)
                        |++||++ ++++..+.+|...|.+++|+|.      +.+|++++.|+.|++||++..+..                  
T Consensus       131 --i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~------------------  189 (319)
T 3frx_A          131 --IKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE------------------  189 (319)
T ss_dssp             --EEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE------------------
T ss_pred             --EEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh------------------
Confidence              8889986 5677888899999999999984      458999999999999998543200                  


Q ss_pred             EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE
Q psy10063        627 PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA  706 (894)
Q Consensus       627 ~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~  706 (894)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (319)
T 3frx_A          190 --------------------------------------------------------------------------------  189 (319)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEE
Q psy10063        707 RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSER  786 (894)
Q Consensus       707 ~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~i  786 (894)
                                                                     ..+.+|...|.+++|+|++++|++++.|+.|+|
T Consensus       190 -----------------------------------------------~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i  222 (319)
T 3frx_A          190 -----------------------------------------------ADFIGHNSNINTLTASPDGTLIASAGKDGEIML  222 (319)
T ss_dssp             -----------------------------------------------EEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred             -----------------------------------------------eeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence                                                           013357788999999999999999999999999


Q ss_pred             EEccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc--------CCCCCeeEEEEeeC
Q psy10063        787 YRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK--------GHFGPINSLAFHPD  856 (894)
Q Consensus       787 wd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~--------gH~~~V~~l~fSpd  856 (894)
                      ||+...+.+..+.  ..+..++|+|++.+++++..++     |+||++..+.++..+.        .|...|.+|+|+||
T Consensus       223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~-----i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  297 (319)
T 3frx_A          223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG-----IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD  297 (319)
T ss_dssp             EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE-----EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT
T ss_pred             EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC
Confidence            9999888765544  3455788999999999887653     9999999887766554        35667999999999


Q ss_pred             CcEEEEecCCCcEEEEecCcc
Q psy10063        857 GKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       857 g~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      |++|++|+.||.|+||++.++
T Consensus       298 g~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          298 GQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             SSEEEEEETTSCEEEEEEEEC
T ss_pred             CCEEEEeecCceEEEEEEeec
Confidence            999999999999999998753

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-38  Score=350.93  Aligned_cols=297  Identities=15%  Similarity=0.157  Sum_probs=238.4

Q ss_pred             EEEEEecCCC-CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE---ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        401 VKMQVTDQSA-KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES---ISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       401 ~~~~l~~H~~-~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~---l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      +...+.+|.+ .|.+|+|+|+|++||+|+.|+.|+|||+..++.+..   ..+|..                        
T Consensus         7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~------------------------   62 (345)
T 3fm0_A            7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR------------------------   62 (345)
T ss_dssp             EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSS------------------------
T ss_pred             EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCC------------------------
Confidence            4457889988 999999999999999999999999999998864322   256776                        


Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                       .|.+|+|+|+|++|++|+.|+.|+|||+..+.  ++..+. |...|.+++|+|++++|++++.|+.             
T Consensus        63 -~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~-------------  128 (345)
T 3fm0_A           63 -TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS-------------  128 (345)
T ss_dssp             -CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-------------
T ss_pred             -cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe-------------
Confidence             78899999999999999999999999998764  556666 4688999999999999999999997             


Q ss_pred             eEEEEecccc---ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063        554 DARFYHLIFE---EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       554 ~v~vwd~~~~---~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~  630 (894)
                       |++||+..+   +++..+.+|...|.+++|+|++++|++|+.|+.|++|+++.++..                      
T Consensus       129 -v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~----------------------  185 (345)
T 3fm0_A          129 -VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV----------------------  185 (345)
T ss_dssp             -EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE----------------------
T ss_pred             -EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE----------------------
Confidence             788888765   345677899999999999999999999999999999987432100                      


Q ss_pred             CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063        631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM  710 (894)
Q Consensus       631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  710 (894)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (345)
T 3fm0_A          186 --------------------------------------------------------------------------------  185 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063        711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR  790 (894)
Q Consensus       711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~  790 (894)
                                                               ....+.+|...|.+|+|+|++++||+++.|+.|+||+..
T Consensus       186 -----------------------------------------~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~  224 (345)
T 3fm0_A          186 -----------------------------------------CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY  224 (345)
T ss_dssp             -----------------------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             -----------------------------------------EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence                                                     001234678889999999999999999999999999964


Q ss_pred             CCce---------------eec----cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc---------eeeecc
Q psy10063        791 KNKA---------------TAG----FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE---------EFARIK  842 (894)
Q Consensus       791 ~~~~---------------~~~----~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~---------~l~~l~  842 (894)
                      ....               +..    +...+..++|++++..+++++.|+    .|+||++..+.         ....+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~----~i~vw~~~~~~~~~~~~~~~~~~~~~  300 (345)
T 3fm0_A          225 LPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD----AIRVFQEDPNSDPQQPTFSLTAHLHQ  300 (345)
T ss_dssp             CTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS----CEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred             cCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC----eEEEEEeCCCCCcceeeEEEEeeecc
Confidence            3211               111    223345788999999999999987    59999987543         123346


Q ss_pred             CCCCCeeEEEEeeCC-cEEEEecCCCcEEEEecCcccccccc
Q psy10063        843 GHFGPINSLAFHPDG-KSYASGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       843 gH~~~V~~l~fSpdg-~~LaS~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      +|...|.+|+|+|++ .+||+||.||.|+||++..++....+
T Consensus       301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH  342 (345)
T ss_dssp             SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred             cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence            899999999999998 59999999999999999988765543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.2e-37  Score=339.62  Aligned_cols=290  Identities=20%  Similarity=0.258  Sum_probs=253.2

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ..++..+.+|.+.|.+++|+|+|++|++|+.||.|+||++..++.+..+.+|..                         .
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~-------------------------~   67 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-------------------------G   67 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-------------------------C
T ss_pred             ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCC-------------------------c
Confidence            456778999999999999999999999999999999999999999999999987                         7


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      |.+++|+|++++|++|+.|+.|+|||+++++++..+.. ...|.+++|+|++.+|++++.++.              |++
T Consensus        68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--------------i~i  133 (312)
T 4ery_A           68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES--------------VRI  133 (312)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--------------EEE
T ss_pred             eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCc--------------EEE
Confidence            88899999999999999999999999999999988875 578999999999999999999997              899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      ||++.++.+..+..|...|.+++|++++++|++++.||.|++||++.++.+.                         .  
T Consensus       134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-------------------------~--  186 (312)
T 4ery_A          134 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK-------------------------T--  186 (312)
T ss_dssp             EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-------------------------E--
T ss_pred             EECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee-------------------------E--
Confidence            9999999999999999999999999999999999999999999986542110                         0  


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (312)
T 4ery_A          187 --------------------------------------------------------------------------------  186 (312)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                                           +...+...+.+++|+|++++|++++.|+.|++||+..++.+..
T Consensus       187 -------------------------------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  229 (312)
T 4ery_A          187 -------------------------------------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT  229 (312)
T ss_dssp             -------------------------------------ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             -------------------------------------EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence                                                 0011234567899999999999999999999999998887665


Q ss_pred             cccCC-----CceEee-cCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEec--CCCcE
Q psy10063        798 FLLSC-----PDFLFD-FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG--EDGFV  869 (894)
Q Consensus       798 ~~~~~-----~~~~fS-~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s--~Dg~V  869 (894)
                      +....     ....++ +++.++++++.|+    .|+|||+..++++..+.+|.+.|.+++|+|++.+|++++  .|+.|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i  305 (312)
T 4ery_A          230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDN----LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI  305 (312)
T ss_dssp             ECSSCCSSSCCCEEEECSSSCEEEECCTTS----CEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE
T ss_pred             EEecCCceEEEEEEEEeCCCcEEEEECCCC----EEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccE
Confidence            43221     122344 5677888888887    599999999999999999999999999999999999986  69999


Q ss_pred             EEEecC
Q psy10063        870 RLHTFD  875 (894)
Q Consensus       870 ~vWdl~  875 (894)
                      +||+.+
T Consensus       306 ~~W~~d  311 (312)
T 4ery_A          306 KLWKSD  311 (312)
T ss_dssp             EEEECC
T ss_pred             EEecCC
Confidence            999975

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-37  Score=344.85  Aligned_cols=318  Identities=24%  Similarity=0.375  Sum_probs=265.1

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ....+.|.+|.+.|.+|+|+|+|++|++|+.||.|+|||+.+++.+..+.+|..                         .
T Consensus        22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-------------------------~   76 (369)
T 3zwl_B           22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-------------------------T   76 (369)
T ss_dssp             SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-------------------------C
T ss_pred             ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-------------------------c
Confidence            355567899999999999999999999999999999999999999999999988                         7


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC-----CCeEEEeccCcccee
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ-----EAREVTTTSTKVGKF  553 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~-----~~~~v~~~~~~~~~~  553 (894)
                      |.+++|+|++++|++++.||.|+|||+++++++..+.+...+.+++|+|++++|++++.+     +.+.+|.........
T Consensus        77 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~  156 (369)
T 3zwl_B           77 IWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH  156 (369)
T ss_dssp             EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence            888899999999999999999999999999999999999999999999999999999988     774444443332221


Q ss_pred             eEEEEeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        554 DARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      .+...   ....+..+..|.+  .|.+++|++++++|++++.||.|++||++.....                       
T Consensus       157 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------------------  210 (369)
T 3zwl_B          157 ELTKV---SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY-----------------------  210 (369)
T ss_dssp             CEEEE---CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE-----------------------
T ss_pred             eeccc---ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe-----------------------
Confidence            11111   1234455566776  9999999999999999999999999998642100                       


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (369)
T 3zwl_B          211 --------------------------------------------------------------------------------  210 (369)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                               ...+..|...|.+++|+|++.+|++++.|+.|++||++.
T Consensus       211 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~  249 (369)
T 3zwl_B          211 -----------------------------------------VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST  249 (369)
T ss_dssp             -----------------------------------------EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             -----------------------------------------EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence                                                     001233566789999999999999999999999999999


Q ss_pred             Cceeeccc--cCCCceEeecCCCeEEEEecCCC----------CceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063        792 NKATAGFL--LSCPDFLFDFDTTREVTTTSTKV----------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS  859 (894)
Q Consensus       792 ~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~----------g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~  859 (894)
                      ++.+..+.  ..+..++|+++++++++++.++.          +.+.|++||+..++++..+.+|...|.+|+|+||+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  329 (369)
T 3zwl_B          250 LQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTS  329 (369)
T ss_dssp             CCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred             CceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCE
Confidence            88766554  33457789999999999987752          2225999999999999999999999999999999999


Q ss_pred             EEEecCCCcEEEEecCccccccccccCcc
Q psy10063        860 YASGGEDGFVRLHTFDQAYFDYTFDISEE  888 (894)
Q Consensus       860 LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~  888 (894)
                      |++++.||.|+||+++.+.+.++++.++.
T Consensus       330 l~s~~~dg~v~iw~~~~~~~~~~~~~~~~  358 (369)
T 3zwl_B          330 YASGGEDGFIRLHHFEKSYFDFKYDVEKA  358 (369)
T ss_dssp             EEEEETTSEEEEEEECHHHHTCCCHHHHH
T ss_pred             EEEEcCCCeEEEEECccccchhHHHHHHH
Confidence            99999999999999999988888765443

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=2e-37  Score=343.19  Aligned_cols=287  Identities=18%  Similarity=0.224  Sum_probs=236.3

Q ss_pred             EEEEEecCCCCEEEEEE-----cc-CCCEEEEecCCCcEEEEecCC-------CeEEEEecCCCCCCeeEEEEcCCCCEE
Q psy10063        401 VKMQVTDQSAKITSLLW-----GN-LDQYIITGHAKGDICTWDLRM-------GRELESISGHAKEPINDMQFSKDATMF  467 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~-----sp-dg~~L~sgs~Dg~I~iWd~~t-------g~~~~~l~~h~~~~V~~v~~spdg~~l  467 (894)
                      +...|.+|.+.|.+|+|     ++ ++++|++|+.|+.|+|||+..       +.++..+.+|..               
T Consensus        13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~---------------   77 (343)
T 2xzm_R           13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH---------------   77 (343)
T ss_dssp             EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS---------------
T ss_pred             eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC---------------
Confidence            44578999999999999     77 999999999999999999974       345677888887               


Q ss_pred             EEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        468 ITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       468 a~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                                .|.+++|+|++.+|++|+.|+.|+|||+++++++..+. |...|.+++|+|++++|++++.++.      
T Consensus        78 ----------~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~------  141 (343)
T 2xzm_R           78 ----------FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE------  141 (343)
T ss_dssp             ----------CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSC------
T ss_pred             ----------ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE------
Confidence                      78889999999999999999999999999999998887 4689999999999999999999997      


Q ss_pred             cCccceeeEEEEeccccceEEEc---cCCCCCeEEEEEecCC----------CEEEEEeCCCcEEEEECCCCccccCCCc
Q psy10063        547 STKVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPDG----------KSYASGGEDGFLISNTLSNGLDISEGSF  613 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg----------~~l~sgs~Dg~I~vwdl~~~~~~~~~~~  613 (894)
                              |++||+.. .....+   .+|...|.+++|+|++          .+|++++.||.|++||... +.      
T Consensus       142 --------i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~------  205 (343)
T 2xzm_R          142 --------IKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QI------  205 (343)
T ss_dssp             --------EEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EE------
T ss_pred             --------EEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ce------
Confidence                    78888873 333333   3789999999999987          7899999999999998421 00      


Q ss_pred             eeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcc
Q psy10063        614 TSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  693 (894)
Q Consensus       614 v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  693 (894)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (343)
T 2xzm_R          206 --------------------------------------------------------------------------------  205 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC
Q psy10063        694 SVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE  773 (894)
Q Consensus       694 ~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~  773 (894)
                                                                                 ...+.+|...|.+++|+|+++
T Consensus       206 -----------------------------------------------------------~~~~~~h~~~v~~~~~s~~g~  226 (343)
T 2xzm_R          206 -----------------------------------------------------------RYTFKAHESNVNHLSISPNGK  226 (343)
T ss_dssp             -----------------------------------------------------------EEEEECCSSCEEEEEECTTSS
T ss_pred             -----------------------------------------------------------eEEEcCccccceEEEECCCCC
Confidence                                                                       001235777899999999999


Q ss_pred             EEEEecCCCcEEEEEccCCc-eeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee--ecc------
Q psy10063        774 KLALALADKVSERYRDRKNK-ATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA--RIK------  842 (894)
Q Consensus       774 ~Latgs~Dg~I~iwd~~~~~-~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~--~l~------  842 (894)
                      +||+|+.|+.|+|||+.... ....  ....+..++|+|++.+++++. ++    .|+||++..++.+.  .+.      
T Consensus       227 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~----~v~iw~~~~~~~~~~~~~~~~~~~~  301 (343)
T 2xzm_R          227 YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQ----GVKIFNLMTQSKAPVCTIEAEPITK  301 (343)
T ss_dssp             EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SS----CEEEEESSSCCSCSEEECCCCSGGG
T ss_pred             EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CC----CEEEEEeCCCCCCceEEeecCcchh
Confidence            99999999999999985433 2222  223456788999998876554 43    49999998876543  333      


Q ss_pred             -----CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        843 -----GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       843 -----gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                           +|...|.+|+|+|+|++|++|+.||.|+||+++.+.
T Consensus       302 ~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~  342 (343)
T 2xzm_R          302 AEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA  342 (343)
T ss_dssp             BTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred             hhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence                 788999999999999999999999999999997653

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.4e-37  Score=381.50  Aligned_cols=454  Identities=12%  Similarity=0.090  Sum_probs=319.7

Q ss_pred             ccceeeeeccCccEEEecCCC-eEEE---------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063        379 SVDRLNSMSPAARKLATNAEP-VVKM---------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS  448 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~-~~~~---------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~  448 (894)
                      .....++|+|||++|+.+..+ .+++         ....|...|.+|+|+| |++|++++.|+.|+|||+.+++++..+.
T Consensus        18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~   96 (902)
T 2oaj_A           18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF   96 (902)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE
T ss_pred             CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc
Confidence            445677899999999887654 3332         2345889999999999 8899999999999999999999998886


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------------------------cceEEEEEecC-CCEEEEEECCC
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAV-----------------------------EPINDMQFSKD-ATMFITASKDH  498 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i-----------------------------~~V~~l~~spd-g~~L~sgs~Dg  498 (894)
                       |.. .|.+++|+|++++|++++.|+.+                             +.|.+|+|+|+ +.+|++|+.||
T Consensus        97 -~~~-~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg  174 (902)
T 2oaj_A           97 -VPG-KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV  174 (902)
T ss_dssp             -CSS-CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred             -CCC-CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence             555 89999999999999999988765                             25789999995 57899999999


Q ss_pred             CEEEEEcCCCcEEEEEeCC-------------------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        499 TAKLFTTHDRQLLKTYTTE-------------------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       499 ~V~iwdl~~~~~~~~~~~~-------------------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      .| |||++.+++++.+..+                   ..|.+++|+|+|++|++++.|+.              |++||
T Consensus       175 ~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~--------------i~lWd  239 (902)
T 2oaj_A          175 TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS--------------LVFWD  239 (902)
T ss_dssp             EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC--------------EEEEE
T ss_pred             cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe--------------EEEEE
Confidence            99 9999999999888754                   67999999999999999999997              88899


Q ss_pred             ccccceEEE--c---cC-------------CCCCeEEEEEec----CC-CEEEEEeCC-----CcEEEEECCC-------
Q psy10063        560 LIFEEEFAR--I---KG-------------HFGPINSLAFHP----DG-KSYASGGED-----GFLISNTLSN-------  604 (894)
Q Consensus       560 ~~~~~~~~~--l---~~-------------h~~~V~~l~~sp----dg-~~l~sgs~D-----g~I~vwdl~~-------  604 (894)
                      ++.++++..  +   .+             |...|.+++|++    ++ .+|++|+.|     +.|++|++..       
T Consensus       240 ~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~  319 (902)
T 2oaj_A          240 ANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSIT  319 (902)
T ss_dssp             TTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGC
T ss_pred             CCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcccc
Confidence            988887653  2   12             345799999964    43 467777665     3788888521       


Q ss_pred             -------------Ccc-c--cCCCceeeeEECcC----------C--cEEEecCCeEEEEecccC---------------
Q psy10063        605 -------------GLD-I--SEGSFTSSSTQQPD----------G--LVYPSQGGHIHSLSSHST---------------  641 (894)
Q Consensus       605 -------------~~~-~--~~~~~v~~~~~spd----------g--~~l~~~~g~i~~~~~~~~---------------  641 (894)
                                   ... +  .....+..+.+.++          +  .+....+|.+..|.....               
T Consensus       320 s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~  399 (902)
T 2oaj_A          320 SYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSW  399 (902)
T ss_dssp             CHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTT
T ss_pred             chhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccc
Confidence                         011 1  12344445554431          1  122444555665543110               


Q ss_pred             -------------------------------------------CCCCCCeeeeccccCCCceEEechhhHHHhhhccccc
Q psy10063        642 -------------------------------------------SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSIN  678 (894)
Q Consensus       642 -------------------------------------------~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~  678 (894)
                                                                 ..+++..+++|+  .|+.|++|+........      
T Consensus       400 ~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs--~DgtVrlWd~~~g~~~~------  471 (902)
T 2oaj_A          400 LRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH--SNGSVRIYDASHGDIQD------  471 (902)
T ss_dssp             BTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE--TTSEEEEEESSCCTTTT------
T ss_pred             cCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec--CCCcEEEEECCCccccC------
Confidence                                                       012344455555  56677777644321100      


Q ss_pred             CCCCeEEeeccCCcceeEec--cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc--------
Q psy10063        679 HSGTRLHVNPFDEQQSVELT--KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL--------  748 (894)
Q Consensus       679 ~~g~~~~~~~~~~~~~~~~s--~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~--------  748 (894)
                        ...+.+         .+.  ...........++|+++|+.++++..++.       +++|+...+..+..        
T Consensus       472 --~~~~~~---------~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-------V~lwd~~~~~~~~~~~~~~~~~  533 (902)
T 2oaj_A          472 --NASFEV---------NLSRTLNKAKELAVDKISFAAETLELAVSIETGD-------VVLFKYEVNQFYSVENRPESGD  533 (902)
T ss_dssp             --TBCEEE---------EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-------EEEEEEEECCC-----------
T ss_pred             --CceEEe---------echhhcCCCCCCceeEEEecCCCCeEEEEecCcE-------EEEEEecCccccCccccCCCcc
Confidence              000000         000  00011123455788888888888776654       55665444321100        


Q ss_pred             ------------------------C------CCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee--
Q psy10063        749 ------------------------D------GSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA--  796 (894)
Q Consensus       749 ------------------------d------g~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~--  796 (894)
                                              +      ...+..+.+|.+.|.+|+|+||| +||+|+.|+.|+|||++....+.  
T Consensus       534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~  612 (902)
T 2oaj_A          534 LEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYME  612 (902)
T ss_dssp             ----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             cceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEe
Confidence                                    0      01245677899999999999999 99999999999999988776543  


Q ss_pred             -------ccccCCCceEee-----cCC---CeEEEEecCCCCceeEEEeec---CCcceeeeccCCC-----CCeeEEE-
Q psy10063        797 -------GFLLSCPDFLFD-----FDT---TREVTTTSTKVGKFDARFYHL---IFEEEFARIKGHF-----GPINSLA-  852 (894)
Q Consensus       797 -------~~~~~~~~~~fS-----~dg---~~l~~as~d~~g~~~I~vwd~---~tg~~l~~l~gH~-----~~V~~l~-  852 (894)
                             ++...+.+++|+     +||   ++|++++.|+    .|++||+   .+|+++..|.+|.     ++|.+++ 
T Consensus       613 ~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~----tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~  688 (902)
T 2oaj_A          613 NIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMG----EVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDA  688 (902)
T ss_dssp             EGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTS----EEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEE
T ss_pred             ehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCC----cEEEEEEecCCCCcEEEEecCceecCCCCceEEEEe
Confidence                   222335678899     886   7899999987    6999999   8899988888874     7788887 


Q ss_pred             Ee----------------------eCCcEEEEecCCCcEEEEecCcccccccc
Q psy10063        853 FH----------------------PDGKSYASGGEDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       853 fS----------------------pdg~~LaS~s~Dg~V~vWdl~~~~~~~~~  883 (894)
                      |+                      ++|.+|+++  |..||||++..+++..+.
T Consensus       689 ~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~  739 (902)
T 2oaj_A          689 FSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG  739 (902)
T ss_dssp             EETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE
T ss_pred             EecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeE
Confidence            76                      556655555  678999999988777655

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=7.3e-38  Score=346.76  Aligned_cols=291  Identities=11%  Similarity=0.114  Sum_probs=225.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec----CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS----GHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~----~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .|...|.+++|+|||++|++++ |+.+++||..    +..+.    .+.. ......+..+             ..|.+|
T Consensus        28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~----~~~~~~~~~~~~~-~~~~~~~~~~-------------~~v~~~   88 (344)
T 4gqb_B           28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGS----LWLFKDPCAAPNE-GFCSAGVQTE-------------AGVADL   88 (344)
T ss_dssp             SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEE----EEEESSGGGTTCG-GGCSEEEEES-------------SCEEEE
T ss_pred             cccCCEEEEEECCCCCEEEEEe-CCceEEeece----eeeeccccccCCc-ceeeeeeccC-------------CCEEEE
Confidence            4677899999999999999887 7789999832    22222    1111 1111111111             169999


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-----eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTY-----TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-----~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +|++++ +|++|+.||.|+|||+++++++..+     .|.+.|.+|+|+|+|++|++++.++.              |++
T Consensus        89 ~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~--------------i~i  153 (344)
T 4gqb_B           89 TWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC--------------IKV  153 (344)
T ss_dssp             EEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--------------EEE
T ss_pred             EEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe--------------EEE
Confidence            999985 6889999999999999998765443     35689999999999999999999997              899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      ||+.++++++.+.+|.+.|.+++|++++. +|++|+.||.|+|||++.++.+..                         +
T Consensus       154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-------------------------~  208 (344)
T 4gqb_B          154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQ-------------------------I  208 (344)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEE-------------------------C
T ss_pred             EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeee-------------------------e
Confidence            99999999999999999999999999885 789999999999999976532100                         0


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       209 --------------------------------------------------------------------------------  208 (344)
T 4gqb_B          209 --------------------------------------------------------------------------------  208 (344)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCcee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                            ....|...+.+++|+|+ +.+|++|+.|+.|+|||++.++.+
T Consensus       209 --------------------------------------~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~  250 (344)
T 4gqb_B          209 --------------------------------------GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV  250 (344)
T ss_dssp             --------------------------------------C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC
T ss_pred             --------------------------------------ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE
Confidence                                                  00113345678899985 678899999999999999988775


Q ss_pred             ec---cccCCCceEeecCCC-eEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEecCCCcEE
Q psy10063        796 AG---FLLSCPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFVR  870 (894)
Q Consensus       796 ~~---~~~~~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s~Dg~V~  870 (894)
                      ..   +...+..++|+|++. +|++++.|+    .|+|||+..++++ .+.+|.+.|.+|+|+|+++ +|++||.||.|+
T Consensus       251 ~~~~~h~~~v~~v~fsp~g~~~lasgs~D~----~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~  325 (344)
T 4gqb_B          251 LSSAVHSQCVTGLVFSPHSVPFLASLSEDC----SLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV  325 (344)
T ss_dssp             EEEECCSSCEEEEEECSSSSCCEEEEETTS----CEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred             EEEcCCCCCEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence            54   344566788999985 678888887    5999999988765 5789999999999999986 577999999999


Q ss_pred             EEecCcccc
Q psy10063        871 LHTFDQAYF  879 (894)
Q Consensus       871 vWdl~~~~~  879 (894)
                      +|++..+.+
T Consensus       326 ~w~v~~~~~  334 (344)
T 4gqb_B          326 HHVVPTEPL  334 (344)
T ss_dssp             EEECCC---
T ss_pred             EEECCCCCC
Confidence            999987644

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.2e-37  Score=347.07  Aligned_cols=287  Identities=14%  Similarity=0.168  Sum_probs=224.4

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecC------CCcEEEEecCCCeEEE----EecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHA------KGDICTWDLRMGRELE----SISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~------Dg~I~iWd~~tg~~~~----~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      ...|.+.|.+|+|||||++|++|+.      |+.|++|+..+++...    ...+|..                      
T Consensus        38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~----------------------   95 (357)
T 4g56_B           38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA----------------------   95 (357)
T ss_dssp             --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS----------------------
T ss_pred             cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC----------------------
Confidence            3579999999999999999999997      6789999987775432    2234554                      


Q ss_pred             CccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE-----EeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        475 AVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT-----YTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       475 ~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~-----~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                         .|.+|+|+|+++ |++++.||.|+|||+.+++.+..     ..|...|.+|+|+|+|++|++++.++.         
T Consensus        96 ---~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~---------  162 (357)
T 4g56_B           96 ---GVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS---------  162 (357)
T ss_dssp             ---CEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC---------
T ss_pred             ---CEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe---------
Confidence               688888998875 55678899999999998775432     235688999999999999999999997         


Q ss_pred             cceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEe
Q psy10063        550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~  628 (894)
                           |++||+..++++..+.+|...|.+|+|++++. +|++++.||.|+|||++.++.+..                  
T Consensus       163 -----v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~------------------  219 (357)
T 4g56_B          163 -----VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR------------------  219 (357)
T ss_dssp             -----EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB------------------
T ss_pred             -----EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee------------------
Confidence                 89999999999999999999999999999875 789999999999999876432100                  


Q ss_pred             cCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEee
Q psy10063        629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARN  708 (894)
Q Consensus       629 ~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~  708 (894)
                                                                                                      
T Consensus       220 --------------------------------------------------------------------------------  219 (357)
T 4g56_B          220 --------------------------------------------------------------------------------  219 (357)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEE
Q psy10063        709 RMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERY  787 (894)
Q Consensus       709 ~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iw  787 (894)
                                                                   .....|...+.+++|+|+ +.+|++|+.|+.|+||
T Consensus       220 ---------------------------------------------~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w  254 (357)
T 4g56_B          220 ---------------------------------------------IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV  254 (357)
T ss_dssp             ---------------------------------------------CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred             ---------------------------------------------eeeccccccccchhhhhcccceEEEeecccceeEE
Confidence                                                         001124456789999998 5688999999999999


Q ss_pred             EccCCceeecc---ccCCCceEeecCCC-eEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee-CCcEEEE
Q psy10063        788 RDRKNKATAGF---LLSCPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYAS  862 (894)
Q Consensus       788 d~~~~~~~~~~---~~~~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp-dg~~LaS  862 (894)
                      |++.++.+..+   ...+..++|+|++. +|++++.|+    .|+|||++.++++..+ +|.+.|.+|+|+| |+++||+
T Consensus       255 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~----~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s  329 (357)
T 4g56_B          255 NIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC----TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTT  329 (357)
T ss_dssp             ESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS----CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEE
T ss_pred             ECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC----EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEE
Confidence            99988765443   34456788999985 677888877    5999999999887655 8999999999998 8999999


Q ss_pred             ecCCCcEEEEecCcccc
Q psy10063        863 GGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       863 ~s~Dg~V~vWdl~~~~~  879 (894)
                      ||.||.|+||++.....
T Consensus       330 ~s~Dg~v~iW~~~~~~~  346 (357)
T 4g56_B          330 VGWDHKVLHHHLPSEGR  346 (357)
T ss_dssp             EETTSCEEEEECC----
T ss_pred             EcCCCeEEEEECCCCCc
Confidence            99999999999976543

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=8.3e-37  Score=345.04  Aligned_cols=308  Identities=16%  Similarity=0.219  Sum_probs=243.7

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ..+|.+.|.|++|+|||++|++|+ |+.++||++.+|+.+..+..|.. ...      +...+...........|.+++|
T Consensus        60 ~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~-~~~------~~~~~~~~~~~~~~~~v~~v~~  131 (393)
T 1erj_A           60 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSA-ANK------DPENLNTSSSPSSDLYIRSVCF  131 (393)
T ss_dssp             EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------CCCCBEEEEEE
T ss_pred             ecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccc-ccc------ccccccccccCCCceeEEEEEE
Confidence            347999999999999999999987 67999999999999988887653 110      0011111111111125999999


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +|+|++|++|+.|+.|+|||++.++++..+.+ ...|.+++|+|++++|++++.++.              |++||++.+
T Consensus       132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~--------------v~iwd~~~~  197 (393)
T 1erj_A          132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT--------------VRIWDLRTG  197 (393)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--------------EEEEETTTT
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc--------------EEEEECCCC
Confidence            99999999999999999999999999988874 578999999999999999999996              899999999


Q ss_pred             ceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        564 EEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      +++..+. |...|.+++|+| ++++|++|+.||.|++||++.++.+.                         .+..    
T Consensus       198 ~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~-------------------------~~~~----  247 (393)
T 1erj_A          198 QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE-------------------------RLDS----  247 (393)
T ss_dssp             EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE-------------------------EEC-----
T ss_pred             eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE-------------------------eecc----
Confidence            8887775 567799999999 89999999999999999986543110                         0000    


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                                                                                      
T Consensus       248 --------------------------------------------------------------------------------  247 (393)
T 1erj_A          248 --------------------------------------------------------------------------------  247 (393)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce--------
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA--------  794 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~--------  794 (894)
                                                   ......+|...|.+++|+|++++|++|+.|+.|++||++....        
T Consensus       248 -----------------------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~  298 (393)
T 1erj_A          248 -----------------------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN  298 (393)
T ss_dssp             ----------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred             -----------------------------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence                                         0001235788899999999999999999999999999876432        


Q ss_pred             -------eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee------CCcEEE
Q psy10063        795 -------TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP------DGKSYA  861 (894)
Q Consensus       795 -------~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp------dg~~La  861 (894)
                             +..+...+..++|++++.+|++++.|+    .|+|||+..++++..+.+|...|.+|+|++      ++.+||
T Consensus       299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~----~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~  374 (393)
T 1erj_A          299 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR----GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA  374 (393)
T ss_dssp             --CEEEEEECCSSCEEEEEECGGGCEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred             CCcceEEEecccCcEEEEEECCCCCEEEEEeCCC----eEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence                   122333345678999999999999987    699999999999999999999999999986      689999


Q ss_pred             EecCCCcEEEEecCcc
Q psy10063        862 SGGEDGFVRLHTFDQA  877 (894)
Q Consensus       862 S~s~Dg~V~vWdl~~~  877 (894)
                      +||.||.|+||+++..
T Consensus       375 sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          375 TGSGDCKARIWKYKKI  390 (393)
T ss_dssp             EEETTSEEEEEEEEEC
T ss_pred             EECCCCcEEECccccc
Confidence            9999999999998643

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.8e-36  Score=374.69  Aligned_cols=410  Identities=17%  Similarity=0.169  Sum_probs=313.7

Q ss_pred             CccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE
Q psy10063        378 LSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES  446 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~  446 (894)
                      ......++|+|||++|+.+..+           .....+.+|.+.|.+++|+|++++|++|+.||.|+|||+.+++.+..
T Consensus        13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~   92 (814)
T 3mkq_A           13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD   92 (814)
T ss_dssp             CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            3445667888999888876532           23336778999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------------cceEEEEEec-CCCEEEEEECCCCEEEEEcC
Q psy10063        447 ISGHAKEPINDMQFSKDATMFITASHSQAV-------------------EPINDMQFSK-DATMFITASKDHTAKLFTTH  506 (894)
Q Consensus       447 l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~  506 (894)
                      +.+|.+ .|.+++|+|++.+|++++.++.+                   ..|.+++|+| ++.+|++++.||.|++||+.
T Consensus        93 ~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~  171 (814)
T 3mkq_A           93 FEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG  171 (814)
T ss_dssp             EECCSS-CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred             EecCCC-CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            999998 99999999999999999999876                   4799999999 89999999999999999999


Q ss_pred             CCcEEEEEeC--CCCeeEEEEcC--CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe
Q psy10063        507 DRQLLKTYTT--ERPVNSAALSP--ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  582 (894)
Q Consensus       507 ~~~~~~~~~~--~~~v~~l~~sp--dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s  582 (894)
                      .++....+..  ...+.+++|+|  ++.+|++++.++.              |++||+..++.+..+.+|...|.+++|+
T Consensus       172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--------------i~~~d~~~~~~~~~~~~~~~~v~~~~~~  237 (814)
T 3mkq_A          172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT--------------IKIWDYQTKSCVATLEGHMSNVSFAVFH  237 (814)
T ss_dssp             CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE--------------EEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred             CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE--------------EEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence            8887777764  37899999999  9999999999986              8999999999999999999999999999


Q ss_pred             cCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCc---EEEecCCeEEEEecccCCCCCCCeeeecccc
Q psy10063        583 PDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGL---VYPSQGGHIHSLSSHSTSSTDTGGVFSGSRV  655 (894)
Q Consensus       583 pdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~---~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~  655 (894)
                      |++++|++++.||.|++||+..++.+.    ....+..++|+|+|.   +....++.+..+.....              
T Consensus       238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  303 (814)
T 3mkq_A          238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND--------------  303 (814)
T ss_dssp             SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC--------------
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC--------------
Confidence            999999999999999999998876442    345677788888875   23333444433332110              


Q ss_pred             CCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCC-c
Q psy10063        656 DDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDAS-P  734 (894)
Q Consensus       656 ~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~-~  734 (894)
                                                          .               ..+.+.++|..++....+........ .
T Consensus       304 ------------------------------------~---------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~  332 (814)
T 3mkq_A          304 ------------------------------------E---------------PTLSLDPVGKLVWSGGKNAAASDIFTAV  332 (814)
T ss_dssp             ------------------------------------S---------------CCEEECSSSEEEEECCTTSCTTCEEEEE
T ss_pred             ------------------------------------C---------------ceeEECCCCCEEEECcccccceeeeeee
Confidence                                                0               01222333333333221111000000 0


Q ss_pred             c-eeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCe
Q psy10063        735 L-MTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTR  813 (894)
Q Consensus       735 l-~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~  813 (894)
                      + ..|....+...   ......+..+...+.+++|+|+|++|++++ |+.+++|++.......  ...+..++|+|||++
T Consensus       333 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~~--~~~i~~~~~spdg~~  406 (814)
T 3mkq_A          333 IRGNEEVEQDEPL---SLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNKA--FGKCQDFVWGPDSNS  406 (814)
T ss_dssp             CCSCCCCCSSSCB---CCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE--EEECSEEEECTTSSC
T ss_pred             cccccccccCccc---eeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccccC--CCceEEEEEeCCCCe
Confidence            0 00111111111   112223455667789999999999999998 8999999976544322  345668999999999


Q ss_pred             EEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC---cEEEEecCCCcEEEEecCcccccccccc
Q psy10063        814 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG---KSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       814 l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg---~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      ++++..++    .|++|+        .+.+|...|.+++|+|||   ++|++++.|+.|+|||++.++.+..+..
T Consensus       407 la~~~~~g----~v~l~~--------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~  469 (814)
T 3mkq_A          407 YALIDETG----QIKYYK--------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDV  469 (814)
T ss_dssp             EEEECTTC----CEEEEE--------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESS
T ss_pred             EEEEeCCC----cEEEEE--------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEec
Confidence            99998877    599995        356788899999999999   6899999999999999998887776654

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8e-37  Score=346.27  Aligned_cols=308  Identities=15%  Similarity=0.165  Sum_probs=263.7

Q ss_pred             EEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEec----CCCe------EEEEecC----------CCCCCeeEEEEc
Q psy10063        403 MQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDL----RMGR------ELESISG----------HAKEPINDMQFS  461 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~----~tg~------~~~~l~~----------h~~~~V~~v~~s  461 (894)
                      +....|.+.|.+++|+|+|+ +|++|+.||.|+|||+    ..++      ....+..          |.. .|.+++|+
T Consensus        39 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s  117 (425)
T 1r5m_A           39 LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTN-QVTCLAWS  117 (425)
T ss_dssp             CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CB-CEEEEEEC
T ss_pred             eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCC-ceEEEEEc
Confidence            34556779999999999999 9999999999999999    8888      4555554          555 89999999


Q ss_pred             CCCCEEEEEeCCCCc-----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-CC----
Q psy10063        462 KDATMFITASHSQAV-----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-RP----  519 (894)
Q Consensus       462 pdg~~la~~~~d~~i-----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~----  519 (894)
                      |++++|++++.++.+                 ..|.+++|+|++++|++++.||.|++||++.++.+..+... ..    
T Consensus       118 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  197 (425)
T 1r5m_A          118 HDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI  197 (425)
T ss_dssp             TTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred             CCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence            999999999999876                 58999999999999999999999999999999999888754 33    


Q ss_pred             -----------eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEE
Q psy10063        520 -----------VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY  588 (894)
Q Consensus       520 -----------v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l  588 (894)
                                 +.+++|++++ .|++++.++.              |++||+..++.+..+.+|...|.+++|++++++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~--------------i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  262 (425)
T 1r5m_A          198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPKGA--------------IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL  262 (425)
T ss_dssp             --------CCCBSCCEEEETT-EEEEECGGGC--------------EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred             eeccccCCcceeeEEEEcCCC-EEEEEcCCCe--------------EEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence                       8999999985 5777877776              8999999999999999999999999999999999


Q ss_pred             EEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhH
Q psy10063        589 ASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQI  668 (894)
Q Consensus       589 ~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~  668 (894)
                      ++++.||.|++||++.++.+                                                            
T Consensus       263 ~~~~~d~~i~i~d~~~~~~~------------------------------------------------------------  282 (425)
T 1r5m_A          263 LSASDDGTLRIWHGGNGNSQ------------------------------------------------------------  282 (425)
T ss_dssp             EEEETTSCEEEECSSSBSCS------------------------------------------------------------
T ss_pred             EEEcCCCEEEEEECCCCccc------------------------------------------------------------
Confidence            99999999999998543210                                                            


Q ss_pred             HHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc
Q psy10063        669 EMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL  748 (894)
Q Consensus       669 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~  748 (894)
                                                                                                      
T Consensus       283 --------------------------------------------------------------------------------  282 (425)
T 1r5m_A          283 --------------------------------------------------------------------------------  282 (425)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc---cCCCceEeecCCCeEEEEecCCCCce
Q psy10063        749 DGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL---LSCPDFLFDFDTTREVTTTSTKVGKF  825 (894)
Q Consensus       749 dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---~~~~~~~fS~dg~~l~~as~d~~g~~  825 (894)
                           ..+.+|...|.+++|+|++ +|++++.|+.|++||+..++.+..+.   ..+..++|+++++++++++.++    
T Consensus       283 -----~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----  352 (425)
T 1r5m_A          283 -----NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG----  352 (425)
T ss_dssp             -----EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS----
T ss_pred             -----eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC----
Confidence                 1123466678899999999 99999999999999999888765543   3455778999999999999887    


Q ss_pred             eEEEeecCCcc--------------------eeeeccCCCC--CeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        826 DARFYHLIFEE--------------------EFARIKGHFG--PINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       826 ~I~vwd~~tg~--------------------~l~~l~gH~~--~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      .|+|||+..++                    ++..+.+|..  .|.+|+|+|++++|++++.||.|+||++++
T Consensus       353 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g  425 (425)
T 1r5m_A          353 QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG  425 (425)
T ss_dssp             CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred             eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence            59999999988                    8899999977  999999999999999999999999999963

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-36  Score=331.52  Aligned_cols=288  Identities=16%  Similarity=0.146  Sum_probs=227.0

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEe-cC-CCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESI-SG-HAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l-~~-h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      .+...|.+|.+.|.+++|+++  +|++|+.|+.|+|||+..+  +.+..+ .+ |..                       
T Consensus         5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~-----------------------   59 (330)
T 2hes_X            5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKK-----------------------   59 (330)
T ss_dssp             EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCS-----------------------
T ss_pred             ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccC-----------------------
Confidence            345578899999999999987  9999999999999999875  455666 34 766                       


Q ss_pred             ccceEEEEEecCCCEEEEEECCCCEEEEEcCC-------CcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        476 VEPINDMQFSKDATMFITASKDHTAKLFTTHD-------RQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~-------~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                        .|.+|+|+|++++|++|+.|+.|+|||++.       .+++..+. |...|.+++|+|+|++|++++.|+.       
T Consensus        60 --~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~-------  130 (330)
T 2hes_X           60 --AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS-------  130 (330)
T ss_dssp             --CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSC-------
T ss_pred             --CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCE-------
Confidence              788999999999999999999999999853       34566665 4688999999999999999999997       


Q ss_pred             CccceeeEEEEeccc----cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063        548 TKVGKFDARFYHLIF----EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDG  623 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~----~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg  623 (894)
                             |++||+..    .+++..+.+|...|.+|+|+|++.+|++|+.|+.|++|++..+..                
T Consensus       131 -------v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~----------------  187 (330)
T 2hes_X          131 -------VWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW----------------  187 (330)
T ss_dssp             -------EEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE----------------
T ss_pred             -------EEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe----------------
Confidence                   78888842    256778899999999999999999999999999999998642200                


Q ss_pred             cEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcce
Q psy10063        624 LVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQI  703 (894)
Q Consensus       624 ~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~  703 (894)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (330)
T 2hes_X          188 --------------------------------------------------------------------------------  187 (330)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC--CCEEEEecCC
Q psy10063        704 EMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK--REKLALALAD  781 (894)
Q Consensus       704 ~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd--g~~Latgs~D  781 (894)
                                                                     ..+..+.+|.+.|.+++|+|+  +.+|++++.|
T Consensus       188 -----------------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D  220 (330)
T 2hes_X          188 -----------------------------------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD  220 (330)
T ss_dssp             -----------------------------------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred             -----------------------------------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence                                                           000134568888999999999  7789999999


Q ss_pred             CcEEEEEccCCc--------eeec----cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc--eee-eccCCCC
Q psy10063        782 KVSERYRDRKNK--------ATAG----FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE--EFA-RIKGHFG  846 (894)
Q Consensus       782 g~I~iwd~~~~~--------~~~~----~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~--~l~-~l~gH~~  846 (894)
                      +.|+||++....        .+..    +...+..++|++++ ++++++.|+    .|+|||+..++  ++. .+.+|..
T Consensus       221 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg----~v~iw~~~~~~~~~~~~~~~~h~~  295 (330)
T 2hes_X          221 STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADG----VLAVYEEVDGEWKVFAKRALCHGV  295 (330)
T ss_dssp             SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTS----CEEEEEEETTEEEEEEEESCTTTT
T ss_pred             CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCC----EEEEEEcCCCceEEEecccccccc
Confidence            999999986541        2221    23345567788554 788888887    59999998773  333 3468887


Q ss_pred             -CeeEEEEee--CCcEEEEecCCCcEEEEecCc
Q psy10063        847 -PINSLAFHP--DGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       847 -~V~~l~fSp--dg~~LaS~s~Dg~V~vWdl~~  876 (894)
                       .|.+|+|+|  ++++||+||.||.|+||+++.
T Consensus       296 ~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          296 YEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             SCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             ceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence             899999999  789999999999999999875

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.1e-35  Score=325.85  Aligned_cols=303  Identities=14%  Similarity=0.137  Sum_probs=252.6

Q ss_pred             ceeeeeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE---EEE
Q psy10063        381 DRLNSMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE---LES  446 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~---~~~  446 (894)
                      ....+|+|||++++....           ....+...+|.+.|.+++|+|++++|++++ ||.|+|||+..++.   +..
T Consensus        12 v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~   90 (337)
T 1gxr_A           12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ   90 (337)
T ss_dssp             CCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE
T ss_pred             eeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec
Confidence            455689999999876532           123345568999999999999999999999 99999999987653   233


Q ss_pred             ec--CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCee
Q psy10063        447 IS--GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVN  521 (894)
Q Consensus       447 l~--~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~  521 (894)
                      +.  +|..                         .|.+++|+|++++|++++.||.|++||++.++  ....+. +...|.
T Consensus        91 ~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~  145 (337)
T 1gxr_A           91 LDCLNRDN-------------------------YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY  145 (337)
T ss_dssp             EECSCTTS-------------------------BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred             ccccCCCC-------------------------cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE
Confidence            32  4544                         78999999999999999999999999999887  444454 457899


Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      +++|+|++++|++++.++.              |++||++.++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus       146 ~~~~~~~~~~l~~~~~dg~--------------v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d  211 (337)
T 1gxr_A          146 ALAISPDSKVCFSCCSDGN--------------IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD  211 (337)
T ss_dssp             EEEECTTSSEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCc--------------EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence            9999999999999999987              89999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCC
Q psy10063        602 LSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSG  681 (894)
Q Consensus       602 l~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g  681 (894)
                      ++.++.+.                                                                        
T Consensus       212 ~~~~~~~~------------------------------------------------------------------------  219 (337)
T 1gxr_A          212 LREGRQLQ------------------------------------------------------------------------  219 (337)
T ss_dssp             TTTTEEEE------------------------------------------------------------------------
T ss_pred             CCCCceEe------------------------------------------------------------------------
Confidence            86542110                                                                        


Q ss_pred             CeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC
Q psy10063        682 TRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD  761 (894)
Q Consensus       682 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~  761 (894)
                                                                                                ...+..
T Consensus       220 --------------------------------------------------------------------------~~~~~~  225 (337)
T 1gxr_A          220 --------------------------------------------------------------------------QHDFTS  225 (337)
T ss_dssp             --------------------------------------------------------------------------EEECSS
T ss_pred             --------------------------------------------------------------------------eecCCC
Confidence                                                                                      001233


Q ss_pred             ceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee--ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063        762 IGFKMPEPPKREKLALALADKVSERYRDRKNKATA--GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA  839 (894)
Q Consensus       762 ~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~--~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~  839 (894)
                      .+.+++|+|++++|++++.|+.|++|++...+...  .+...+..++|+++++++++++.++    .|++||+..++.+.
T Consensus       226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~~~~~  301 (337)
T 1gxr_A          226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYGASIF  301 (337)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEE
T ss_pred             ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCC----cEEEEECCCCeEEE
Confidence            57789999999999999999999999998877643  3334456788999999999999887    69999999998874


Q ss_pred             eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        840 RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       840 ~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      . ..|...|.+++|+|++++|++++.||.|+||++
T Consensus       302 ~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          302 Q-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             E-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             E-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            4 468899999999999999999999999999997

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=2.9e-35  Score=323.51  Aligned_cols=290  Identities=16%  Similarity=0.162  Sum_probs=240.6

Q ss_pred             eEEEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCCCe-----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRMGR-----ELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~tg~-----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .++..|+||.+.|.+|+|+|+ +++||+|+.||.|+|||+..++     +++.+.+|..                     
T Consensus        29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~---------------------   87 (340)
T 4aow_A           29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH---------------------   87 (340)
T ss_dssp             EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS---------------------
T ss_pred             EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC---------------------
Confidence            455679999999999999997 6899999999999999987643     5677888887                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                          .|.+++|+|+|++|++++.|+.|++|+...+........ ...+..+.+++++.+|++++.++.            
T Consensus        88 ----~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~------------  151 (340)
T 4aow_A           88 ----FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT------------  151 (340)
T ss_dssp             ----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC------------
T ss_pred             ----CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCe------------
Confidence                788899999999999999999999999999888877765 578899999999999999999997            


Q ss_pred             eeEEEEeccccce-EEEccCCCCCeEEEEEecCC--CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        553 FDARFYHLIFEEE-FARIKGHFGPINSLAFHPDG--KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       553 ~~v~vwd~~~~~~-~~~l~~h~~~V~~l~~spdg--~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                        +++||+..... ...+.+|...|.+++|++++  .++++++.|+.|++||++.++.+                     
T Consensus       152 --~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~---------------------  208 (340)
T 4aow_A          152 --IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK---------------------  208 (340)
T ss_dssp             --EEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE---------------------
T ss_pred             --EEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee---------------------
Confidence              78888765544 34467899999999999865  57889999999999998653210                     


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                                                                                                      
T Consensus       209 --------------------------------------------------------------------------------  208 (340)
T 4aow_A          209 --------------------------------------------------------------------------------  208 (340)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                                                                  ..+.+|.+.|.+|+|+|++++|++|+.|+.|+|||+
T Consensus       209 --------------------------------------------~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~  244 (340)
T 4aow_A          209 --------------------------------------------TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL  244 (340)
T ss_dssp             --------------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             --------------------------------------------eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence                                                        012346778999999999999999999999999999


Q ss_pred             cCCceeeccccC--CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec---------cCCCCCeeEEEEeeCCc
Q psy10063        790 RKNKATAGFLLS--CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI---------KGHFGPINSLAFHPDGK  858 (894)
Q Consensus       790 ~~~~~~~~~~~~--~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l---------~gH~~~V~~l~fSpdg~  858 (894)
                      ...+.+..+...  +..++|++++..++ ++.++    .|+|||++.+.++..+         .+|...|.+|+|+|||+
T Consensus       245 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~  319 (340)
T 4aow_A          245 NEGKHLYTLDGGDIINALCFSPNRYWLC-AATGP----SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ  319 (340)
T ss_dssp             TTTEEEEEEECSSCEEEEEECSSSSEEE-EEETT----EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred             ccCceeeeecCCceEEeeecCCCCceee-ccCCC----EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence            998886655433  44667888876555 44454    5999999988766554         36899999999999999


Q ss_pred             EEEEecCCCcEEEEecCccc
Q psy10063        859 SYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       859 ~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      +||+|+.||.|+||+++.|.
T Consensus       320 ~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          320 TLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EEEEEETTSCEEEEEEEC--
T ss_pred             EEEEEeCCCEEEEEeCCCcC
Confidence            99999999999999998875

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=5e-35  Score=355.63  Aligned_cols=288  Identities=18%  Similarity=0.205  Sum_probs=240.4

Q ss_pred             eEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCC-----CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRM-----GRELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~t-----g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .++..+.+|.+.|.+|+|++++ ++|++|+.|+.|+|||+..     +...+.+.+|..                     
T Consensus       373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~---------------------  431 (694)
T 3dm0_A          373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH---------------------  431 (694)
T ss_dssp             EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS---------------------
T ss_pred             chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCC---------------------
Confidence            4455789999999999999875 6999999999999999875     345677888887                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                          .|.+++|+|+|++|++|+.||.|+|||+..+++++.+. |...|.+++|+|++++|++++.|+.            
T Consensus       432 ----~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~------------  495 (694)
T 3dm0_A          432 ----FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT------------  495 (694)
T ss_dssp             ----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC------------
T ss_pred             ----cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCE------------
Confidence                78889999999999999999999999999999988887 4688999999999999999999998            


Q ss_pred             eeEEEEeccccceEEEc---cCCCCCeEEEEEecCC--CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        553 FDARFYHLIFEEEFARI---KGHFGPINSLAFHPDG--KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg--~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                        |++||+.........   .+|...|.+++|+|++  .+|++|+.||.|+|||++..+.+                   
T Consensus       496 --i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~-------------------  554 (694)
T 3dm0_A          496 --IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR-------------------  554 (694)
T ss_dssp             --EEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE-------------------
T ss_pred             --EEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE-------------------
Confidence              778887644333322   4788999999999987  58999999999999998543200                   


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                                                                                                      
T Consensus       555 --------------------------------------------------------------------------------  554 (694)
T 3dm0_A          555 --------------------------------------------------------------------------------  554 (694)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERY  787 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iw  787 (894)
                                                                    ..+.+|.+.|.+++|+|++++|++++.|+.|+||
T Consensus       555 ----------------------------------------------~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw  588 (694)
T 3dm0_A          555 ----------------------------------------------STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW  588 (694)
T ss_dssp             ----------------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred             ----------------------------------------------EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence                                                          1234577889999999999999999999999999


Q ss_pred             EccCCceeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC-------------------C
Q psy10063        788 RDRKNKATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-------------------G  846 (894)
Q Consensus       788 d~~~~~~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~-------------------~  846 (894)
                      |+..++.+..+..  .+..++|++++.+++++...     .|+|||++.++++..+..|.                   .
T Consensus       589 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  663 (694)
T 3dm0_A          589 DLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH-----GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVI  663 (694)
T ss_dssp             ETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEEEEEECCCCC----------------CCC
T ss_pred             ECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCC-----CEEEEECCCCCChhhhccccccccccccccccccCCceeE
Confidence            9999888765543  34467899999888776654     49999999998887765432                   1


Q ss_pred             CeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      .|.+|+|+|||++|++|+.||.|+||++..
T Consensus       664 ~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~  693 (694)
T 3dm0_A          664 YCTSLNWSADGSTLFSGYTDGVIRVWGIGR  693 (694)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             EeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence            378899999999999999999999999863

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=5.4e-35  Score=328.25  Aligned_cols=290  Identities=16%  Similarity=0.141  Sum_probs=234.0

Q ss_pred             CeEEEEEecCCCCEEEEEEccCC-CEEEEecCCCcEEEEecCCCeEEEEec--CCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLD-QYIITGHAKGDICTWDLRMGRELESIS--GHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg-~~L~sgs~Dg~I~iWd~~tg~~~~~l~--~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      ..+...+.+|.+.|.+++|+|++ ++|++|+.||.|+|||+..++....+.  +|..                       
T Consensus        63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~-----------------------  119 (383)
T 3ei3_B           63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGD-----------------------  119 (383)
T ss_dssp             CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTC-----------------------
T ss_pred             cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCC-----------------------
Confidence            34556788999999999999999 899999999999999999888777765  5776                       


Q ss_pred             ccceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEe-C---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063        476 VEPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYT-T---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       476 i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~  550 (894)
                        .|.+++|+| ++.+|++++.|+.|+|||++. +.+..+. +   ...|.+++|+|++++|++++.++.          
T Consensus       120 --~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------  186 (383)
T 3ei3_B          120 --AITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGR----------  186 (383)
T ss_dssp             --BEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSE----------
T ss_pred             --ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCC----------
Confidence              788889998 789999999999999999996 4444444 3   267999999999999999999986          


Q ss_pred             ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        551 GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                          |++||+ .++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||++..+...                    
T Consensus       187 ----i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--------------------  241 (383)
T 3ei3_B          187 ----LLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN--------------------  241 (383)
T ss_dssp             ----EEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT--------------------
T ss_pred             ----EEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc--------------------
Confidence                889998 5788888999999999999999999 99999999999999986432100                    


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                                                                                                      
T Consensus       242 --------------------------------------------------------------------------------  241 (383)
T 3ei3_B          242 --------------------------------------------------------------------------------  241 (383)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEEEE
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSERYR  788 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd  788 (894)
                                                               .....+ +|...|.+++|+| ++.+|++++.|+.|+|||
T Consensus       242 -----------------------------------------~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd  279 (383)
T 3ei3_B          242 -----------------------------------------SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS  279 (383)
T ss_dssp             -----------------------------------------CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred             -----------------------------------------ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence                                                     000011 3667789999999 999999999999999999


Q ss_pred             ccCCceeeccccC---------CCceEeecCCCeEEEE---------ecCCCCceeEEEeecCCcceeeeccC--CCCCe
Q psy10063        789 DRKNKATAGFLLS---------CPDFLFDFDTTREVTT---------TSTKVGKFDARFYHLIFEEEFARIKG--HFGPI  848 (894)
Q Consensus       789 ~~~~~~~~~~~~~---------~~~~~fS~dg~~l~~a---------s~d~~g~~~I~vwd~~tg~~l~~l~g--H~~~V  848 (894)
                      ++.++.+..+...         .-...|++++..++++         +.++    .|+|||+.+++++..+.+  |.+.|
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~----~i~iwd~~~~~~~~~l~~~~~~~~~  355 (383)
T 3ei3_B          280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKR----TIDIYDANSGGLVHQLRDPNAAGII  355 (383)
T ss_dssp             TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCC----CEEEEETTTCCEEEEECBTTBCSCC
T ss_pred             CCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCC----eEEEEecCCCceeeeecCCCCCceE
Confidence            9887664332210         1112344444444333         3343    699999999999999987  56778


Q ss_pred             eEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        849 NSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       849 ~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      .+|+|+|||++|++|+ ||.|+||++++
T Consensus       356 ~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          356 SLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             CEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             EEEEEecCccEEEEec-CCcEEEEecCC
Confidence            8889999999999997 99999999974

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.6e-35  Score=334.69  Aligned_cols=293  Identities=15%  Similarity=0.107  Sum_probs=231.8

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ...+|...|+||+|+| ++.+||+|+.||.|+|||+..++.  +..+.+|.+                         .|.
T Consensus       114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~-------------------------~V~  168 (435)
T 4e54_B          114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGG-------------------------SIT  168 (435)
T ss_dssp             EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSC-------------------------CCC
T ss_pred             cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCC-------------------------CEE
Confidence            4568999999999999 567999999999999999987754  444567877                         788


Q ss_pred             EEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        481 DMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +|+|+| ++.+|++|+.||.|+|||++.+.+.....+   ...+.+++|++++.+|++++.++.              |+
T Consensus       169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~--------------i~  234 (435)
T 4e54_B          169 GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN--------------VI  234 (435)
T ss_dssp             EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB--------------EE
T ss_pred             EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc--------------Ee
Confidence            888887 788999999999999999987665544443   245789999999999999999997              88


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +||+. ++.+..+.+|...|.+|+|+|++. +|++|+.|+.|+|||++..+...                          
T Consensus       235 ~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~--------------------------  287 (435)
T 4e54_B          235 LLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA--------------------------  287 (435)
T ss_dssp             EEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS--------------------------
T ss_pred             eeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc--------------------------
Confidence            89986 566778899999999999999876 78899999999999986542110                          


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       288 --------------------------------------------------------------------------------  287 (435)
T 4e54_B          288 --------------------------------------------------------------------------------  287 (435)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                          ......+|...|.+++|+|++.+|++++.|+.|+|||+..++..
T Consensus       288 ------------------------------------~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~  331 (435)
T 4e54_B          288 ------------------------------------SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP  331 (435)
T ss_dssp             ------------------------------------CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred             ------------------------------------eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence                                                00012357788999999999999999999999999999887764


Q ss_pred             ecccc---------CCCceEeecCCCeEEEEecCCC--------CceeEEEeecCCcceeeecc-CCCCCeeEE-EEeeC
Q psy10063        796 AGFLL---------SCPDFLFDFDTTREVTTTSTKV--------GKFDARFYHLIFEEEFARIK-GHFGPINSL-AFHPD  856 (894)
Q Consensus       796 ~~~~~---------~~~~~~fS~dg~~l~~as~d~~--------g~~~I~vwd~~tg~~l~~l~-gH~~~V~~l-~fSpd  856 (894)
                      ..+..         ..-..+|++++..++++.....        ....|+|||+.+|+++..+. +|...|.++ +|+||
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspd  411 (435)
T 4e54_B          332 LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPM  411 (435)
T ss_dssp             EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTT
T ss_pred             eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCC
Confidence            43321         1224567888887777654311        11149999999999998865 788899988 69999


Q ss_pred             CcEEEEecCCCcEEEEecCcccc
Q psy10063        857 GKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       857 g~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      |++||+|+ |+.|+||+++.++.
T Consensus       412 g~~lasg~-d~~i~iW~~~~gk~  433 (435)
T 4e54_B          412 GDTLASAM-GYHILIWSQQEART  433 (435)
T ss_dssp             SSCEEEEC-SSEEEECCCC----
T ss_pred             CCEEEEEc-CCcEEEEECCcCee
Confidence            99999886 78999999998764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=3e-35  Score=326.51  Aligned_cols=316  Identities=12%  Similarity=0.070  Sum_probs=243.9

Q ss_pred             EEEecCCCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        403 MQVTDQSAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ..+.+|.+.|.+|+|+|+    ..+|++++.++.|+|||+..++.++.+..|.. .                   .....
T Consensus        12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~-~-------------------~~~~~   71 (366)
T 3k26_A           12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVD-A-------------------DADEN   71 (366)
T ss_dssp             EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEEC-S-------------------CTTCC
T ss_pred             EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccc-c-------------------CCCCc
Confidence            455689999999999984    34666666677999999998887777665432 0                   00016


Q ss_pred             eEEEEEecC----CCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccce
Q psy10063        479 INDMQFSKD----ATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       479 V~~l~~spd----g~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      |.+++|+|+    |.+|++|+.||.|+|||+.+++++..+. |...|.+++|+| ++.+|++++.++.            
T Consensus        72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~------------  139 (366)
T 3k26_A           72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHA------------  139 (366)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSC------------
T ss_pred             EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCe------------
Confidence            788888887    6799999999999999999999999888 578999999999 9999999999997            


Q ss_pred             eeEEEEeccccceEEEc---cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        553 FDARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                        |++||+..++.+..+   .+|...|.+++|+|++++|++++.||.|++||++.++.+....  ..+.++|++..+   
T Consensus       140 --i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~---  212 (366)
T 3k26_A          140 --LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK--ESYDYNPNKTNR---  212 (366)
T ss_dssp             --EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH--HHHTCCGGGCSS---
T ss_pred             --EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc--eeEEecCCCCcc---
Confidence              899999999988887   7899999999999999999999999999999997654321000  000111111000   


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                                                                                                      
T Consensus       213 --------------------------------------------------------------------------------  212 (366)
T 3k26_A          213 --------------------------------------------------------------------------------  212 (366)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                                .+.           ..           ...........+|...|.+++|+  +.+|++++.|+.|++||+
T Consensus       213 ----------~~~-----------~~-----------~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~  258 (366)
T 3k26_A          213 ----------PFI-----------SQ-----------KIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKP  258 (366)
T ss_dssp             ----------CCC-----------CE-----------EECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEE
T ss_pred             ----------ccc-----------ce-----------eeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeC
Confidence                      000           00           00001112344588889999998  789999999999999998


Q ss_pred             cCCce--------------ee---ccccCCCceEeecC--CCeEEEEecCCCCceeEEEeecCCccee----eeccCC--
Q psy10063        790 RKNKA--------------TA---GFLLSCPDFLFDFD--TTREVTTTSTKVGKFDARFYHLIFEEEF----ARIKGH--  844 (894)
Q Consensus       790 ~~~~~--------------~~---~~~~~~~~~~fS~d--g~~l~~as~d~~g~~~I~vwd~~tg~~l----~~l~gH--  844 (894)
                      ...+.              +.   .+...+..++|+++  +++|++++.++    .|+|||+..++++    ..+.+|  
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~  334 (366)
T 3k26_A          259 GKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG----KLYVWDLEVEDPHKAKCTTLTHHKC  334 (366)
T ss_dssp             SSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS----CEEEEECCSSSGGGCEEEEECCTTC
T ss_pred             CCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC----cEEEEECCCCCCccccceEEccccc
Confidence            77643              21   22334667889999  99999998887    5999999988644    477787  


Q ss_pred             CCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        845 FGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       845 ~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      ...|.+|+|+|++++|++++.||.|+|||+.
T Consensus       335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          335 GAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            7999999999999999999999999999985

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.6e-34  Score=320.16  Aligned_cols=304  Identities=12%  Similarity=0.063  Sum_probs=243.0

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      +..|.+.|.+++|+|++++|++|+.|+.|+|||+..++  .+..+.+|..                         .|.++
T Consensus         4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~-------------------------~v~~~   58 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-------------------------QVTGV   58 (372)
T ss_dssp             EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-------------------------CEEEE
T ss_pred             ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC-------------------------cccEE
Confidence            45699999999999999999999999999999999998  8888998987                         78899


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +|+|++++|++++.||.|+|||++.+++...+.   +...|.+++|+|++++|++++.++.              |++||
T Consensus        59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------v~i~d  124 (372)
T 1k8k_C           59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV--------------ISICY  124 (372)
T ss_dssp             EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS--------------EEEEE
T ss_pred             EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE--------------EEEEE
Confidence            999999999999999999999999988665543   5678999999999999999999997              77788


Q ss_pred             ccccce----EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        560 LIFEEE----FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       560 ~~~~~~----~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +..++.    .....+|...|.+++|+|++++|++++.||.|++||++.........                       
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-----------------------  181 (372)
T 1k8k_C          125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA-----------------------  181 (372)
T ss_dssp             EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC-----------------------
T ss_pred             ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc-----------------------
Confidence            777652    33346789999999999999999999999999999986432100000                       


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                              ...|                                                    
T Consensus       182 ------------------------~~~~----------------------------------------------------  185 (372)
T 1k8k_C          182 ------------------------PTPW----------------------------------------------------  185 (372)
T ss_dssp             ------------------------CBTT----------------------------------------------------
T ss_pred             ------------------------cccc----------------------------------------------------
Confidence                                    0000                                                    


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                             +.     ....+.....+.+|...|.+++|+|++.+|++++.|+.|++||++.++.+
T Consensus       186 -----------------------~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  237 (372)
T 1k8k_C          186 -----------------------GS-----KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV  237 (372)
T ss_dssp             -----------------------BS-----CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred             -----------------------cc-----ccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence                                   00     00011112234467888999999999999999999999999999988876


Q ss_pred             ecccc---CCCceEeecCCCeEEEEecCCCCceeEEEeecCC--cce--------------------------------e
Q psy10063        796 AGFLL---SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF--EEE--------------------------------F  838 (894)
Q Consensus       796 ~~~~~---~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t--g~~--------------------------------l  838 (894)
                      ..+..   .+..++|++++.+++++ .++    .|+||++..  ++.                                .
T Consensus       238 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (372)
T 1k8k_C          238 ATLASETLPLLAVTFITESSLVAAG-HDC----FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE  312 (372)
T ss_dssp             EEEECSSCCEEEEEEEETTEEEEEE-TTS----SCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---
T ss_pred             EEEccCCCCeEEEEEecCCCEEEEE-eCC----eEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccc
Confidence            65543   34577899999988877 554    599999987  421                                0


Q ss_pred             ------eec-cCCCCCeeEEEEe-eCC---cEEEEecCCCcEEEEecCcccc
Q psy10063        839 ------ARI-KGHFGPINSLAFH-PDG---KSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       839 ------~~l-~gH~~~V~~l~fS-pdg---~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                            ..+ .+|.+.|.+|+|+ ++|   .+|++|+.||.|+||+++.++.
T Consensus       313 ~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~  364 (372)
T 1k8k_C          313 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES  364 (372)
T ss_dssp             ------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred             cCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence                  333 4999999999976 666   9999999999999999987553

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-35  Score=334.46  Aligned_cols=284  Identities=12%  Similarity=0.079  Sum_probs=238.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC----CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM----GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t----g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .|...|.+++|+|++++|++|+.||.|+|||+..    .+.+..+.+|..                         .|.+|
T Consensus        65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~-------------------------~v~~~  119 (416)
T 2pm9_A           65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSS-------------------------SVKTV  119 (416)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSS-------------------------CCCEE
T ss_pred             ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCcc-------------------------ceEEE
Confidence            5889999999999999999999999999999987    457888888987                         78888


Q ss_pred             EEecC-CCEEEEEECCCCEEEEEcCCCc------EEEEE----eCCCCeeEEEEcCC-CCEEEEEECCCCeEEEeccCcc
Q psy10063        483 QFSKD-ATMFITASKDHTAKLFTTHDRQ------LLKTY----TTERPVNSAALSPI-LPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       483 ~~spd-g~~L~sgs~Dg~V~iwdl~~~~------~~~~~----~~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~  550 (894)
                      +|+|+ +.+|++++.||.|+|||++.++      ....+    .+...|.+++|+|+ +.+|++++.++.          
T Consensus       120 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~----------  189 (416)
T 2pm9_A          120 KFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNF----------  189 (416)
T ss_dssp             EECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSC----------
T ss_pred             EEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCC----------
Confidence            88887 8899999999999999999876      33332    35678999999999 788899888887          


Q ss_pred             ceeeEEEEeccccceEEEccCC------CCCeEEEEEecCC-CEEEEEeCCC---cEEEEECCCCccccCCCceeeeEEC
Q psy10063        551 GKFDARFYHLIFEEEFARIKGH------FGPINSLAFHPDG-KSYASGGEDG---FLISNTLSNGLDISEGSFTSSSTQQ  620 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h------~~~V~~l~~spdg-~~l~sgs~Dg---~I~vwdl~~~~~~~~~~~v~~~~~s  620 (894)
                          |++||++.++.+..+..|      ...|.+++|+|++ .+|++++.|+   .|++||++.+...            
T Consensus       190 ----v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~------------  253 (416)
T 2pm9_A          190 ----ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP------------  253 (416)
T ss_dssp             ----EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC------------
T ss_pred             ----EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC------------
Confidence                899999999988888776      7899999999997 6899999998   9999998653110            


Q ss_pred             cCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccC
Q psy10063        621 PDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKD  700 (894)
Q Consensus       621 pdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~  700 (894)
                                                                                                      
T Consensus       254 --------------------------------------------------------------------------------  253 (416)
T 2pm9_A          254 --------------------------------------------------------------------------------  253 (416)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceec-CCCCceEEEeeCC-CCCEEEEe
Q psy10063        701 EQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA-GPVDIGFKMPEPP-KREKLALA  778 (894)
Q Consensus       701 ~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~-~h~~~v~~la~sp-dg~~Latg  778 (894)
                                                                          ...+. +|...|.+++|+| ++.+|+++
T Consensus       254 ----------------------------------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~  281 (416)
T 2pm9_A          254 ----------------------------------------------------LQTLNQGHQKGILSLDWCHQDEHLLLSS  281 (416)
T ss_dssp             ----------------------------------------------------SBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred             ----------------------------------------------------cEEeecCccCceeEEEeCCCCCCeEEEE
Confidence                                                                00122 5677899999999 89999999


Q ss_pred             cCCCcEEEEEccCCceeecc---ccCCCceEeecCC-CeEEEEecCCCCceeEEEeecCCcceeeecc------------
Q psy10063        779 LADKVSERYRDRKNKATAGF---LLSCPDFLFDFDT-TREVTTTSTKVGKFDARFYHLIFEEEFARIK------------  842 (894)
Q Consensus       779 s~Dg~I~iwd~~~~~~~~~~---~~~~~~~~fS~dg-~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~------------  842 (894)
                      +.|+.|++||++.++.+..+   ...+..++|++++ .++++++.++    .|+|||+..++......            
T Consensus       282 ~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~  357 (416)
T 2pm9_A          282 GRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN----KIEVQTLQNLTNTLDEQETETKQQESETD  357 (416)
T ss_dssp             ESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS----EEEEEESCCCCCSSCC-------------
T ss_pred             eCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC----cEEEEEccCCCCCcccccccccccCCccc
Confidence            99999999999988876544   4456788999999 7888888877    69999998776443221            


Q ss_pred             -----------------------CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        843 -----------------------GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       843 -----------------------gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                                             .|..+|.+++|+|||++|++++.||.|+||++..+
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          358 FWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             ---------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             ccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence                                   27788899999999999999999999999999864

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=8.9e-35  Score=327.44  Aligned_cols=290  Identities=12%  Similarity=0.085  Sum_probs=242.6

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe------EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR------ELESISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~------~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      ....+.+|.+.|.+|+|+|  ++|++|+.||.|+|||+..++      .+..+.+|..                      
T Consensus         8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~----------------------   63 (397)
T 1sq9_A            8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS----------------------   63 (397)
T ss_dssp             EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT----------------------
T ss_pred             hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCC----------------------
Confidence            4457789999999999998  899999999999999999988      7888888887                      


Q ss_pred             CccceEEEEEecC----C---CEEEEEECCCCEEEEEcCCCcE-----EEEEeCC------CCeeEEEEc----CCCCE-
Q psy10063        475 AVEPINDMQFSKD----A---TMFITASKDHTAKLFTTHDRQL-----LKTYTTE------RPVNSAALS----PILPH-  531 (894)
Q Consensus       475 ~i~~V~~l~~spd----g---~~L~sgs~Dg~V~iwdl~~~~~-----~~~~~~~------~~v~~l~~s----pdg~~-  531 (894)
                         .|.+++|+|+    +   ++|++++.||.|+|||+..++.     +..+..+      ..|.+++|+    |++++ 
T Consensus        64 ---~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  140 (397)
T 1sq9_A           64 ---GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR  140 (397)
T ss_dssp             ---CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred             ---cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE
Confidence               7888888888    8   9999999999999999998886     7777644      889999999    99999 


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccc------cceEE-----Ec-------cCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIF------EEEFA-----RI-------KGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~------~~~~~-----~l-------~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      |++++.++.              |++||+..      ++.+.     .+       ..|...|.+++|+|++ +|++++.
T Consensus       141 l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~  205 (397)
T 1sq9_A          141 LVATDVKGT--------------TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN  205 (397)
T ss_dssp             EEEEETTSC--------------EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT
T ss_pred             EEEEeCCCc--------------EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC
Confidence            999999987              77888877      65555     66       4488999999999999 9999999


Q ss_pred             CCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhh
Q psy10063        594 DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARN  673 (894)
Q Consensus       594 Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~  673 (894)
                      ||.|++||++.++.+.                         .+.                                    
T Consensus       206 dg~i~i~d~~~~~~~~-------------------------~~~------------------------------------  224 (397)
T 1sq9_A          206 NGTVQISELSTLRPLY-------------------------NFE------------------------------------  224 (397)
T ss_dssp             TSEEEEEETTTTEEEE-------------------------EEE------------------------------------
T ss_pred             CCcEEEEECCCCceeE-------------------------EEe------------------------------------
Confidence            9999999986532110                         000                                    


Q ss_pred             cccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc
Q psy10063        674 RMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT  753 (894)
Q Consensus       674 ~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~  753 (894)
                                                                                                      
T Consensus       225 --------------------------------------------------------------------------------  224 (397)
T 1sq9_A          225 --------------------------------------------------------------------------------  224 (397)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceecCC---CCceEEEeeCCCCCEEEEecCC---CcEEEEEccCCceeeccc----------------cCCCceEeecCC
Q psy10063        754 PILAGP---VDIGFKMPEPPKREKLALALAD---KVSERYRDRKNKATAGFL----------------LSCPDFLFDFDT  811 (894)
Q Consensus       754 ~~~~~h---~~~v~~la~spdg~~Latgs~D---g~I~iwd~~~~~~~~~~~----------------~~~~~~~fS~dg  811 (894)
                       ...+|   ...|.+++|+|++.+|++++.|   +.|++||++.++.+..+.                ..+..++|++++
T Consensus       225 -~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  303 (397)
T 1sq9_A          225 -SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG  303 (397)
T ss_dssp             -CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred             -ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence             00124   5678899999999999999999   999999999888765443                334577899999


Q ss_pred             CeEEEEecCCCCceeEEEeecCCcceeeecc------CC---------------CCCeeEEEEeeCC----------cEE
Q psy10063        812 TREVTTTSTKVGKFDARFYHLIFEEEFARIK------GH---------------FGPINSLAFHPDG----------KSY  860 (894)
Q Consensus       812 ~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~------gH---------------~~~V~~l~fSpdg----------~~L  860 (894)
                      ++|++++.++    .|+|||+..++++..+.      +|               ...|.+|+|+|+|          ++|
T Consensus       304 ~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l  379 (397)
T 1sq9_A          304 ETLCSAGWDG----KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESL  379 (397)
T ss_dssp             SEEEEEETTS----EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEE
T ss_pred             CEEEEEeCCC----eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceE
Confidence            9999999887    69999999999999999      88               9999999999999          799


Q ss_pred             EEecCCCcEEEEecCccc
Q psy10063        861 ASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       861 aS~s~Dg~V~vWdl~~~~  878 (894)
                      ++++.||.|+||+++.++
T Consensus       380 ~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          380 CCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             EEEETTTEEEEEEEEC--
T ss_pred             EEecCCCcEEEEEcCCCC
Confidence            999999999999998763

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.6e-34  Score=314.14  Aligned_cols=246  Identities=15%  Similarity=0.220  Sum_probs=215.5

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|.+|+|+|++++|++++.||.|+|||++++++++.+.. ...|.+++|++++++|++++.++.              |+
T Consensus        15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~--------------i~   80 (304)
T 2ynn_A           15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFR--------------IR   80 (304)
T ss_dssp             CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSE--------------EE
T ss_pred             ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCE--------------EE
Confidence            789999999999999999999999999999999988885 578999999999999999999997              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +||+..++.+..+.+|.+.|.+|+|+|++++|++|+.||.|++||++.+..+                            
T Consensus        81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~----------------------------  132 (304)
T 2ynn_A           81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL----------------------------  132 (304)
T ss_dssp             EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE----------------------------
T ss_pred             EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch----------------------------
Confidence            9999999999999999999999999999999999999999999998532100                            


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (304)
T 2ynn_A          133 --------------------------------------------------------------------------------  132 (304)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEEEEccCCcee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                          ...+.+|...|.+++|+| ++.+|++|+.|+.|++||+......
T Consensus       133 ------------------------------------~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~  176 (304)
T 2ynn_A          133 ------------------------------------EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN  176 (304)
T ss_dssp             ------------------------------------EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred             ------------------------------------hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence                                                012345778899999999 6789999999999999999876654


Q ss_pred             ecccc----CCCceEeec--CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        796 AGFLL----SCPDFLFDF--DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       796 ~~~~~----~~~~~~fS~--dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      ..+..    .+..+.|++  ++.++++++.|+    .|+|||++.++++..+.+|...|.+++|+|++++|++|+.||.|
T Consensus       177 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~----~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i  252 (304)
T 2ynn_A          177 FTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL  252 (304)
T ss_dssp             EEEECCCTTCEEEEEECCSTTCCEEEEEETTS----EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred             ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC----eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE
Confidence            43332    233456665  778999999887    69999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccccccccc
Q psy10063        870 RLHTFDQAYFDYTFDI  885 (894)
Q Consensus       870 ~vWdl~~~~~~~~~~~  885 (894)
                      +|||+..++++..+..
T Consensus       253 ~iWd~~~~~~~~~~~~  268 (304)
T 2ynn_A          253 KIWNSSTYKVEKTLNV  268 (304)
T ss_dssp             EEEETTTCCEEEEECC
T ss_pred             EEEECCCCceeeeccC
Confidence            9999999888777754

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=8.1e-34  Score=319.91  Aligned_cols=323  Identities=15%  Similarity=0.116  Sum_probs=245.6

Q ss_pred             EEEEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        402 KMQVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ...+.+|.+.|.+|+|+| ++++|++|+.||.|+|||+..++....+....   +..  ...       ....++...|.
T Consensus        36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~--~~~-------~~~~~~~~~v~  103 (408)
T 4a11_B           36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA---VCS--IGR-------DHPDVHRYSVE  103 (408)
T ss_dssp             EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE---EEE--ECT-------TCTTCCSSCEE
T ss_pred             eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc---ccc--ccc-------cccccCCCcEE
Confidence            346778999999999999 99999999999999999999876544332100   000  000       00011112788


Q ss_pred             EEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCC---CEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        481 DMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL---PHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       481 ~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg---~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +++|+| ++.+|++++.||.|++||++.++++..+.+...+.+++|++.+   .+|++++.++.              |+
T Consensus       104 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------v~  169 (408)
T 4a11_B          104 TVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPK--------------VQ  169 (408)
T ss_dssp             EEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSS--------------EE
T ss_pred             EEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCe--------------EE
Confidence            999999 7889999999999999999999999999999999999999954   49999999987              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +||+..++.+..+.+|...|.+++|+|+++ +|++++.||.|++||++.+...                        +..
T Consensus       170 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~------------------------~~~  225 (408)
T 4a11_B          170 LCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC------------------------LIT  225 (408)
T ss_dssp             EEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC------------------------SEE
T ss_pred             EEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc------------------------ccc
Confidence            999999999999999999999999999998 5899999999999999764311                        000


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                      +....                                        +                                  
T Consensus       226 ~~~~~----------------------------------------~----------------------------------  231 (408)
T 4a11_B          226 LDQHN----------------------------------------G----------------------------------  231 (408)
T ss_dssp             CCTTT----------------------------------------T----------------------------------
T ss_pred             ccccc----------------------------------------c----------------------------------
Confidence            00000                                        0                                  


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                     ...........+|...|.+++|+|++++|++++.|+.|++||+..++..
T Consensus       232 -------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  280 (408)
T 4a11_B          232 -------------------------------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT  280 (408)
T ss_dssp             -------------------------------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred             -------------------------------ccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence                                           0000111234568889999999999999999999999999999987764


Q ss_pred             eccccC--------CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063        796 AGFLLS--------CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  867 (894)
Q Consensus       796 ~~~~~~--------~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg  867 (894)
                      ......        .........+..+++++.++    .|+|||+..++++..+.+|.+.|.+|+|+|++++|++++.||
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  356 (408)
T 4a11_B          281 LVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS----TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDC  356 (408)
T ss_dssp             CCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT----EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred             eeccccccccccccceeEEecCCCceEEEEecCC----EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCC
Confidence            433211        11122333455566666665    699999999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccccccc
Q psy10063        868 FVRLHTFDQAYFDYTF  883 (894)
Q Consensus       868 ~V~vWdl~~~~~~~~~  883 (894)
                      .|+||+++.++.+...
T Consensus       357 ~i~iw~~~~~~~~~~~  372 (408)
T 4a11_B          357 NILAWVPSLYEPVPDD  372 (408)
T ss_dssp             CEEEEEECC-------
T ss_pred             eEEEEeCCCCCccCCC
Confidence            9999999988776544

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-34  Score=329.31  Aligned_cols=302  Identities=13%  Similarity=0.122  Sum_probs=240.5

Q ss_pred             eeeeccCccEEEec----CCCeEEEEE-ecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCC---Ce---EEEEecCC
Q psy10063        383 LNSMSPAARKLATN----AEPVVKMQV-TDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRM---GR---ELESISGH  450 (894)
Q Consensus       383 ~~~~s~dg~~l~~~----~~~~~~~~l-~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~t---g~---~~~~l~~h  450 (894)
                      ...|+++++.++..    ....+...+ .+|.+.|.+|+|+| ++++|++|+.||.|+|||+..   +.   ....+ +|
T Consensus        32 ~~~f~~~~~~~~~~~~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h  110 (437)
T 3gre_A           32 YKEFGPIQEIVRSPNMGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DC  110 (437)
T ss_dssp             CGGGCCCCCCCCCCCGGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-EC
T ss_pred             hhhcCCccccccccccccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cC
Confidence            34577777777644    234555566 89999999999999 999999999999999999876   43   12222 35


Q ss_pred             CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC---CCcEEEEEe------------
Q psy10063        451 AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH---DRQLLKTYT------------  515 (894)
Q Consensus       451 ~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~---~~~~~~~~~------------  515 (894)
                      ..                         .|.+|+|+|++++|++|+.||.|+|||++   .++++..+.            
T Consensus       111 ~~-------------------------~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~  165 (437)
T 3gre_A          111 SS-------------------------TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNF  165 (437)
T ss_dssp             SS-------------------------CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGG
T ss_pred             CC-------------------------CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCc
Confidence            54                         78999999999999999999999999995   565554433            


Q ss_pred             -CCCCeeEEE--EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC--CCCCeEEEEEecCCCEEEE
Q psy10063        516 -TERPVNSAA--LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHPDGKSYAS  590 (894)
Q Consensus       516 -~~~~v~~l~--~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~spdg~~l~s  590 (894)
                       +...+.++.  +++++.+|++++.++.              |++||++.++++..+.+  |.+.|.+++|+|++++|++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~--------------i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s  231 (437)
T 3gre_A          166 GKNEYAVRMRAFVNEEKSLLVALTNLSR--------------VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLIL  231 (437)
T ss_dssp             SSCCCEEEEEEEECSSCEEEEEEETTSE--------------EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEE
T ss_pred             ccccCceEEEEEEcCCCCEEEEEeCCCe--------------EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEE
Confidence             345566666  6688999999999986              89999999999999988  8999999999999999999


Q ss_pred             EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHH
Q psy10063        591 GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEM  670 (894)
Q Consensus       591 gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~  670 (894)
                      |+.||.|++||++.++.+.                         .+                                  
T Consensus       232 ~~~dg~i~iwd~~~~~~~~-------------------------~~----------------------------------  252 (437)
T 3gre_A          232 GTTRGIIDIWDIRFNVLIR-------------------------SW----------------------------------  252 (437)
T ss_dssp             EETTSCEEEEETTTTEEEE-------------------------EE----------------------------------
T ss_pred             EcCCCeEEEEEcCCccEEE-------------------------EE----------------------------------
Confidence            9999999999997543110                         00                                  


Q ss_pred             hhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCC
Q psy10063        671 ARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDG  750 (894)
Q Consensus       671 ~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg  750 (894)
                                                                                                      
T Consensus       253 --------------------------------------------------------------------------------  252 (437)
T 3gre_A          253 --------------------------------------------------------------------------------  252 (437)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcceecCCCCceEEE----eeCCCCCEEEEecCCCcEEEEEccCCceeeccc---------------------------
Q psy10063        751 SDTPILAGPVDIGFKM----PEPPKREKLALALADKVSERYRDRKNKATAGFL---------------------------  799 (894)
Q Consensus       751 ~~~~~~~~h~~~v~~l----a~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---------------------------  799 (894)
                           ...|...|.++    +|++++.+|++++.|+.|+|||++.++.+..+.                           
T Consensus       253 -----~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  327 (437)
T 3gre_A          253 -----SFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIR  327 (437)
T ss_dssp             -----BCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCC
T ss_pred             -----ecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccc
Confidence                 00133345566    556778899999999999999998877644332                           


Q ss_pred             --cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC----------------------------------
Q psy10063        800 --LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG----------------------------------  843 (894)
Q Consensus       800 --~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g----------------------------------  843 (894)
                        ..+..++|+ ++.+|++++.|+    .|+|||+..++++..+.+                                  
T Consensus       328 ~~~~v~~l~~~-~~~~l~s~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (437)
T 3gre_A          328 SLNALSTISVS-NDKILLTDEATS----SIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDD  402 (437)
T ss_dssp             SGGGGCCEEEE-TTEEEEEEGGGT----EEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---------
T ss_pred             cCCceEEEEEC-CceEEEecCCCC----eEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCc
Confidence              224567788 778899988887    699999999988877766                                  


Q ss_pred             ---CCCCeeEEEEeeC--CcEEEEecCCCcEEEEe
Q psy10063        844 ---HFGPINSLAFHPD--GKSYASGGEDGFVRLHT  873 (894)
Q Consensus       844 ---H~~~V~~l~fSpd--g~~LaS~s~Dg~V~vWd  873 (894)
                         |.+.|.+|+|+++  +.+|++|+.||.|+||+
T Consensus       403 ~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          403 SLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             ----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             ccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence               8999999999998  88999999999999995

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-33  Score=305.41  Aligned_cols=293  Identities=10%  Similarity=0.055  Sum_probs=244.6

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      .+...+.+|.+.|.+++| +++++|++|+.||.|+|||+..++.+..+..|..                         .|
T Consensus         9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~-------------------------~v   62 (313)
T 3odt_A            9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQG-------------------------FL   62 (313)
T ss_dssp             EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSS-------------------------CE
T ss_pred             HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCc-------------------------cE
Confidence            566788999999999999 9999999999999999999999999999998887                         78


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCC---cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDR---QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .+++|+|++++|++++.||.|++|++...   +.+..+. +...|.+++|  ++.+|++++.++.              |
T Consensus        63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~--------------i  126 (313)
T 3odt_A           63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT--------------A  126 (313)
T ss_dssp             EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE--------------E
T ss_pred             EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC--------------E
Confidence            89999999999999999999999998764   4555555 5688999999  6789999999997              7


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      ++||  .++.+..+..|...|.+++|.+ ++.+|++++.||.|++||.....                           .
T Consensus       127 ~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------------------------~  177 (313)
T 3odt_A          127 KVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVI---------------------------K  177 (313)
T ss_dssp             EEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEE---------------------------E
T ss_pred             EEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceE---------------------------E
Confidence            8888  6777888889999999999998 89999999999999999832100                           0


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                      .                                                                               
T Consensus       178 ~-------------------------------------------------------------------------------  178 (313)
T 3odt_A          178 T-------------------------------------------------------------------------------  178 (313)
T ss_dssp             E-------------------------------------------------------------------------------
T ss_pred             E-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                              +...|...+.+++|+|++. |++++.|+.|++||++.++.
T Consensus       179 ----------------------------------------~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~  217 (313)
T 3odt_A          179 ----------------------------------------FSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV  217 (313)
T ss_dssp             ----------------------------------------ECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE
T ss_pred             ----------------------------------------EeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh
Confidence                                                    0011556688999999988 99999999999999998887


Q ss_pred             eeccc---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        795 TAGFL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       795 ~~~~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                      +..+.   ..+..++|++++ ++++++.++    .|+|||+..++++..+..|...|.+++|+|+++ |++++.||.|+|
T Consensus       218 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg----~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i  291 (313)
T 3odt_A          218 LRTYEGHESFVYCIKLLPNG-DIVSCGEDR----TVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRI  291 (313)
T ss_dssp             EEEEECCSSCEEEEEECTTS-CEEEEETTS----EEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEE
T ss_pred             hhhhhcCCceEEEEEEecCC-CEEEEecCC----EEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEE
Confidence            65543   445578899999 688888776    699999999999999999999999999999999 667899999999


Q ss_pred             EecCccccccccccCccc
Q psy10063        872 HTFDQAYFDYTFDISEEF  889 (894)
Q Consensus       872 Wdl~~~~~~~~~~~~~~~  889 (894)
                      |+++.+++....+++.++
T Consensus       292 w~~~~~~~~~~~~~~~~~  309 (313)
T 3odt_A          292 FSQEKSRWASEDEIKGEL  309 (313)
T ss_dssp             EESCGGGCCC--------
T ss_pred             EeCCCCceeehhhhhhhh
Confidence            999999888777765544

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.5e-34  Score=328.50  Aligned_cols=345  Identities=8%  Similarity=0.041  Sum_probs=252.4

Q ss_pred             EEEecCCCC---EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        403 MQVTDQSAK---ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       403 ~~l~~H~~~---V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      +.+.++...   +.+++|+|+|++|++|+.||.|+|||+..++....+..| .                         .+
T Consensus        47 ~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~-------------------------~~  100 (420)
T 3vl1_A           47 IVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-D-------------------------YT  100 (420)
T ss_dssp             EECCSTTTCCBCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-C-------------------------EE
T ss_pred             EeecCCCcccccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-C-------------------------ce
Confidence            344444433   448999999999999999999999999988766555554 2                         35


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      ....|++++++|++|+.||.|+|||++.++++..+. |...|.+++|+|++++|++++.++.              |++|
T Consensus       101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~--------------i~iw  166 (420)
T 3vl1_A          101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQ--------------LKIW  166 (420)
T ss_dssp             EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSE--------------EEEE
T ss_pred             EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCe--------------EEEE
Confidence            556788999999999999999999999999888864 6789999999999999999999996              8999


Q ss_pred             eccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC-------CCceeeeEECcCCcEEEecCC
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE-------GSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~-------~~~v~~~~~spdg~~l~~~~g  631 (894)
                      |+..++.+..+.+|...|.+++|+|++++|++++.||.|++||++.++.+..       ...+..+++.+.+...     
T Consensus       167 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----  241 (420)
T 3vl1_A          167 SVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ-----  241 (420)
T ss_dssp             ETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS-----
T ss_pred             eCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce-----
Confidence            9999999999999999999999999999999999999999999987764321       1122222222211000     


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                       +...                          +         ...               ...+.
T Consensus       242 -----------------~~~~--------------------------~---------~~~---------------v~~~~  254 (420)
T 3vl1_A          242 -----------------LHEI--------------------------S---------TSK---------------KNNLE  254 (420)
T ss_dssp             -----------------CGGG--------------------------C---------CCC---------------CCTTC
T ss_pred             -----------------eeec--------------------------c---------cCc---------------ccceE
Confidence                             0000                          0         000               01123


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEEecCCCcEEEEEcc
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALALADKVSERYRDR  790 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs~Dg~I~iwd~~  790 (894)
                      ++++|..++.+..++.       +.+|+...+...      ..+..+|...|.+++|+|++. +|++|+.||.|++||++
T Consensus       255 ~s~~~~~l~~~~~dg~-------i~i~d~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~  321 (420)
T 3vl1_A          255 FGTYGKYVIAGHVSGV-------ITVHNVFSKEQT------IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR  321 (420)
T ss_dssp             SSCTTEEEEEEETTSC-------EEEEETTTCCEE------EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred             EcCCCCEEEEEcCCCe-------EEEEECCCCcee------EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence            3344444444332222       444543322211      112345788899999999999 99999999999999998


Q ss_pred             CCce-eeccccCC---CceEeecCCCeEEEEecCCCCceeEEEeecCCc---------ceeeeccCCCCCeeEEEEeeCC
Q psy10063        791 KNKA-TAGFLLSC---PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE---------EEFARIKGHFGPINSLAFHPDG  857 (894)
Q Consensus       791 ~~~~-~~~~~~~~---~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg---------~~l~~l~gH~~~V~~l~fSpdg  857 (894)
                      .++. +..+...+   -..+++++++++++++.|+    .|+||++...         .....+.+|.+.|.+++|+||+
T Consensus       322 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  397 (420)
T 3vl1_A          322 SPECPVGEFLINEGTPINNVYFAAGALFVSSGFDT----SIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDD  397 (420)
T ss_dssp             CTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTE----EEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred             CCcCchhhhhccCCCCceEEEeCCCCEEEEecCCc----cEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence            8754 33332212   2234667888999988887    6999998763         2233466899999999999999


Q ss_pred             c---EEEEecCCCcEEEEecCc
Q psy10063        858 K---SYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       858 ~---~LaS~s~Dg~V~vWdl~~  876 (894)
                      +   .|+++|.+|.+++|+++.
T Consensus       398 ~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          398 ESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             SSSCEEEEEETTTEEEEEESCC
T ss_pred             CCcceEEEEcCCceEEEEeccC
Confidence            9   788888899999999875

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=3.3e-34  Score=317.12  Aligned_cols=291  Identities=12%  Similarity=0.124  Sum_probs=234.2

Q ss_pred             eEEEEEecCCCCEEEEEEccCCC-EEEEecC---CCcEEEEecCCCeEEEEec-CCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQ-YIITGHA---KGDICTWDLRMGRELESIS-GHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~-~L~sgs~---Dg~I~iWd~~tg~~~~~l~-~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      .+...+.+|.+.|.+|+|+|++. +|++|+.   ||.|+|||+..++...... +|..                      
T Consensus         9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~----------------------   66 (357)
T 3i2n_A            9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAK----------------------   66 (357)
T ss_dssp             EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESS----------------------
T ss_pred             HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccC----------------------
Confidence            55567789999999999999996 4556665   8999999999887654433 5665                      


Q ss_pred             CccceEEEEEecC---CCEEEEEECCCCEEEEEcCCCc-EEEEEe-CCCCeeEEE------EcCCCCEEEEEECCCCeEE
Q psy10063        475 AVEPINDMQFSKD---ATMFITASKDHTAKLFTTHDRQ-LLKTYT-TERPVNSAA------LSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       475 ~i~~V~~l~~spd---g~~L~sgs~Dg~V~iwdl~~~~-~~~~~~-~~~~v~~l~------~spdg~~l~~~~~~~~~~v  543 (894)
                         .|.+++|+|+   +.+|++|+.||.|++||+..++ ++..+. |...|.+++      |++++++|++++.++.   
T Consensus        67 ---~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~---  140 (357)
T 3i2n_A           67 ---PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT---  140 (357)
T ss_dssp             ---CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC---
T ss_pred             ---cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe---
Confidence               6777778777   7999999999999999999888 777776 468899995      5789999999999997   


Q ss_pred             EeccCccceeeEEEEeccccc-eEEEccCCCC----CeEEEE----EecCCCEEEEEeCCCcEEEEECCCCccccCCCce
Q psy10063        544 TTTSTKVGKFDARFYHLIFEE-EFARIKGHFG----PINSLA----FHPDGKSYASGGEDGFLISNTLSNGLDISEGSFT  614 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~----~V~~l~----~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v  614 (894)
                                 |++||+..++ .+..+..|.+    .|.+++    |++++++|++++.||.|++||++.++.+      
T Consensus       141 -----------i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------  203 (357)
T 3i2n_A          141 -----------VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR------  203 (357)
T ss_dssp             -----------EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE------
T ss_pred             -----------EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee------
Confidence                       8899998876 6777766554    899998    6789999999999999999998653210      


Q ss_pred             eeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcce
Q psy10063        615 SSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS  694 (894)
Q Consensus       615 ~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  694 (894)
                                                                                                      
T Consensus       204 --------------------------------------------------------------------------------  203 (357)
T 3i2n_A          204 --------------------------------------------------------------------------------  203 (357)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC---C
Q psy10063        695 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP---K  771 (894)
Q Consensus       695 ~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp---d  771 (894)
                                                                                  ....|...|.+++|+|   +
T Consensus       204 ------------------------------------------------------------~~~~~~~~v~~~~~~~~~~~  223 (357)
T 3i2n_A          204 ------------------------------------------------------------WETNIKNGVCSLEFDRKDIS  223 (357)
T ss_dssp             ------------------------------------------------------------EEEECSSCEEEEEESCSSSS
T ss_pred             ------------------------------------------------------------eecCCCCceEEEEcCCCCCC
Confidence                                                                        0112445688999999   9


Q ss_pred             CCEEEEecCCCcEEEEEccCCceee--------ccccCCCceEeecCCC-eEEEEecCCCCceeEEEeecCCc-------
Q psy10063        772 REKLALALADKVSERYRDRKNKATA--------GFLLSCPDFLFDFDTT-REVTTTSTKVGKFDARFYHLIFE-------  835 (894)
Q Consensus       772 g~~Latgs~Dg~I~iwd~~~~~~~~--------~~~~~~~~~~fS~dg~-~l~~as~d~~g~~~I~vwd~~tg-------  835 (894)
                      +.+|++++.|+.|++||++..+.+.        .+...+..++|++++. ++++++.++    .|+|||+..+       
T Consensus       224 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~  299 (357)
T 3i2n_A          224 MNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG----GLHLWKYEYPIQRSKKD  299 (357)
T ss_dssp             CCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS----EEEEEEEECCSCC--CC
T ss_pred             CCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC----cEEEeecCCCccccccc
Confidence            9999999999999999988765432        3444566788999999 788888877    6999999754       


Q ss_pred             ------------ceeeeccCCCCCeeEEEEeeCCcEEE-EecCCCcEEEEecCcccc
Q psy10063        836 ------------EEFARIKGHFGPINSLAFHPDGKSYA-SGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       836 ------------~~l~~l~gH~~~V~~l~fSpdg~~La-S~s~Dg~V~vWdl~~~~~  879 (894)
                                  +++..+.+|.+.|.+|+|+|+|++|+ +++.||.|+||++....+
T Consensus       300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence                        46677889999999999999999998 899999999999987653

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=3.8e-33  Score=317.84  Aligned_cols=289  Identities=15%  Similarity=0.181  Sum_probs=234.0

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC--CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG--HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~--h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ..+..|+||++ .+|++|. |+.|+|||+.+|++++.+..  |..                         .|.+|+|+|+
T Consensus       106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~-------------------------~V~sv~fspd  158 (420)
T 4gga_A          106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGE-------------------------YISSVAWIKE  158 (420)
T ss_dssp             TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTC-------------------------CEEEEEECTT
T ss_pred             ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCC-------------------------cEEEEEECCC
Confidence            34678999975 4777775 89999999999998877764  444                         6899999999


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ce
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EE  565 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~  565 (894)
                      |++|++|+.||.|+|||++++++++.+.+ ...+.+++|+  +.+|++++.++.              +++||.... ..
T Consensus       159 g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~--------------i~~~d~~~~~~~  222 (420)
T 4gga_A          159 GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGH--------------IHHHDVRVAEHH  222 (420)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE--------------EEEEETTSSSCE
T ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCc--------------eeEeeeccccee
Confidence            99999999999999999999999998875 4678777775  679999999986              778887654 45


Q ss_pred             EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCC
Q psy10063        566 FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTD  645 (894)
Q Consensus       566 ~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d  645 (894)
                      +..+.+|...+.++.|++++++|++++.|+.|++|++..++...                                    
T Consensus       223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~------------------------------------  266 (420)
T 4gga_A          223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW------------------------------------  266 (420)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS------------------------------------
T ss_pred             eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc------------------------------------
Confidence            66788999999999999999999999999999999986543110                                    


Q ss_pred             CCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccC
Q psy10063        646 TGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFD  725 (894)
Q Consensus       646 ~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~  725 (894)
                                                                                                      
T Consensus       267 --------------------------------------------------------------------------------  266 (420)
T 4gga_A          267 --------------------------------------------------------------------------------  266 (420)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEE--ecCCCcEEEEEccCCceeeccccC-
Q psy10063        726 EQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLAL--ALADKVSERYRDRKNKATAGFLLS-  801 (894)
Q Consensus       726 ~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Lat--gs~Dg~I~iwd~~~~~~~~~~~~~-  801 (894)
                                               ..+.....|...|.+++|+|++. +|++  |+.|+.|+|||+..++.+..+... 
T Consensus       267 -------------------------~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~  321 (420)
T 4gga_A          267 -------------------------VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS  321 (420)
T ss_dssp             -------------------------CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS
T ss_pred             -------------------------eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc
Confidence                                     00012334667788999999754 4444  568999999999999887665543 


Q ss_pred             -CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063        802 -CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       802 -~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                       +..++|++++..++++++...+  .|+|||+.+++++..|.+|.+.|.+|+|+|||++||+||.||.|+||++.+....
T Consensus       322 ~v~~~~~~~~~~~lv~~sg~~d~--~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~  399 (420)
T 4gga_A          322 QVCSILWSPHYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPA  399 (420)
T ss_dssp             CEEEEEEETTTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred             ceeeeeecCCCCeEEEEEecCCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence             3466799999999998765433  6999999999999999999999999999999999999999999999999765544


Q ss_pred             cccc
Q psy10063        881 YTFD  884 (894)
Q Consensus       881 ~~~~  884 (894)
                      .+.+
T Consensus       400 ~~~~  403 (420)
T 4gga_A          400 RRRE  403 (420)
T ss_dssp             ----
T ss_pred             chhh
Confidence            4443

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.1e-33  Score=304.95  Aligned_cols=243  Identities=16%  Similarity=0.222  Sum_probs=217.1

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..+.+|...|.+++|++++.+|++|+.|+.|+|||+.++++++.+..|..                         .+.++
T Consensus        74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~-------------------------~~~~~  128 (321)
T 3ow8_A           74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV-------------------------DAWTL  128 (321)
T ss_dssp             EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTT-------------------------CCCCE
T ss_pred             eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc-------------------------cEEEE
Confidence            35789999999999999999999999999999999999999999988876                         67888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      +|+|++++|++|+.||.|+|||++.++....+.. ...|.+++|+|+|++|++++.++.              |++||++
T Consensus       129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~--------------i~iwd~~  194 (321)
T 3ow8_A          129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI--------------INIFDIA  194 (321)
T ss_dssp             EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSC--------------EEEEETT
T ss_pred             EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCe--------------EEEEECC
Confidence            8999999999999999999999999998888775 578999999999999999999997              8999999


Q ss_pred             ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063        562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST  641 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~  641 (894)
                      .++.+..+.+|...|.+|+|+|++++|++|+.||.|+|||++.++.+                                 
T Consensus       195 ~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~---------------------------------  241 (321)
T 3ow8_A          195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA---------------------------------  241 (321)
T ss_dssp             TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE---------------------------------
T ss_pred             CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee---------------------------------
Confidence            99999999999999999999999999999999999999998643210                                 


Q ss_pred             CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063        642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV  721 (894)
Q Consensus       642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v  721 (894)
                                                                                                      
T Consensus       242 --------------------------------------------------------------------------------  241 (321)
T 3ow8_A          242 --------------------------------------------------------------------------------  241 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc--
Q psy10063        722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL--  799 (894)
Q Consensus       722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--  799 (894)
                                                      ..+.+|...|.+++|+|++.+|++++.|+.|+|||+..++++..+.  
T Consensus       242 --------------------------------~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h  289 (321)
T 3ow8_A          242 --------------------------------GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH  289 (321)
T ss_dssp             --------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred             --------------------------------EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC
Confidence                                            1234577789999999999999999999999999999888766543  


Q ss_pred             -cCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        800 -LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       800 -~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                       ..+..++|++++++|++++.|+    .|+|||+.
T Consensus       290 ~~~v~~v~~s~~g~~l~s~~~d~----~i~vwd~p  320 (321)
T 3ow8_A          290 QDQVWGVKYNGNGSKIVSVGDDQ----EIHIYDCP  320 (321)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTC----CEEEEECC
T ss_pred             CCcEEEEEECCCCCEEEEEeCCC----eEEEEeCC
Confidence             4456788999999999999988    59999963

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2e-33  Score=308.27  Aligned_cols=301  Identities=16%  Similarity=0.150  Sum_probs=223.1

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      +..+.+|.+.|.+|+|+|++++|++|+.||.|+|||+..+    +.+..+.+|..                         
T Consensus         4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-------------------------   58 (351)
T 3f3f_A            4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS-------------------------   58 (351)
T ss_dssp             CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS-------------------------
T ss_pred             cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC-------------------------
Confidence            3467899999999999999999999999999999999876    56777888887                         


Q ss_pred             ceEEEEEec--CCCEEEEEECCCCEEEEEcCCC---------cEEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEE
Q psy10063        478 PINDMQFSK--DATMFITASKDHTAKLFTTHDR---------QLLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREV  543 (894)
Q Consensus       478 ~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~---------~~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v  543 (894)
                      .|.+|+|+|  ++++|++|+.||.|+|||++.+         +++..+. +...|.+++|+|+  +.+|++++.++.   
T Consensus        59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~---  135 (351)
T 3f3f_A           59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI---  135 (351)
T ss_dssp             CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE---
T ss_pred             cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc---
Confidence            788888888  6899999999999999999887         4566665 4688999999999  999999999997   


Q ss_pred             EeccCccceeeEEEEeccccceEEEc-------------cCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCCcc
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARI-------------KGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l-------------~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                                 |++||++.++.+..+             .+|...|.+++|+|+   +.+|++++.|+.+.+|+...++.
T Consensus       136 -----------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~  204 (351)
T 3f3f_A          136 -----------LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL  204 (351)
T ss_dssp             -----------EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred             -----------EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence                       677777666543332             268889999999997   89999999999997776543210


Q ss_pred             ccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEee
Q psy10063        608 ISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVN  687 (894)
Q Consensus       608 ~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~  687 (894)
                      .                          .                                                    
T Consensus       205 ~--------------------------~----------------------------------------------------  206 (351)
T 3f3f_A          205 H--------------------------V----------------------------------------------------  206 (351)
T ss_dssp             E--------------------------E----------------------------------------------------
T ss_pred             e--------------------------e----------------------------------------------------
Confidence            0                          0                                                    


Q ss_pred             ccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEe
Q psy10063        688 PFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMP  767 (894)
Q Consensus       688 ~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la  767 (894)
                                                                                       ...+.+|...|.+++
T Consensus       207 -----------------------------------------------------------------~~~~~~h~~~i~~~~  221 (351)
T 3f3f_A          207 -----------------------------------------------------------------AAKLPGHKSLIRSIS  221 (351)
T ss_dssp             -----------------------------------------------------------------EEECCCCCSCEEEEE
T ss_pred             -----------------------------------------------------------------eeecCCCCcceeEEE
Confidence                                                                             002345778899999


Q ss_pred             eCCCC----CEEEEecCCCcEEEEEccCCceeeccccC---CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee
Q psy10063        768 EPPKR----EKLALALADKVSERYRDRKNKATAGFLLS---CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR  840 (894)
Q Consensus       768 ~spdg----~~Latgs~Dg~I~iwd~~~~~~~~~~~~~---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~  840 (894)
                      |+|++    .+|++++.||.|++||+............   .....++.+...+..+.........+.+|+...++++..
T Consensus       222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (351)
T 3f3f_A          222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE  301 (351)
T ss_dssp             ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred             ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence            99998    89999999999999999876553332222   222234444444444444433333478888888899999


Q ss_pred             ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       841 l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      +.+|.+.|.+|+|+|++++|++++.||.|+||++..++....+.
T Consensus       302 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~  345 (351)
T 3f3f_A          302 HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS  345 (351)
T ss_dssp             ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred             EecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence            99999999999999999999999999999999999876655443

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.9e-33  Score=315.97  Aligned_cols=269  Identities=14%  Similarity=0.174  Sum_probs=232.1

Q ss_pred             CCccceeeeeccCccEEEecCCC-eEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-VVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      +......++|+|++.+|+.++.+ .++          ..+.+|.+.|.+|+|+|+|++|++|+.|+.|+|||+..+++++
T Consensus       107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~  186 (410)
T 1vyh_C          107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR  186 (410)
T ss_dssp             CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence            33455667899999988877543 333          3678999999999999999999999999999999999999999


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEE
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAA  524 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~  524 (894)
                      .+.+|..                         .|.+++|+|++.+|++|+.|+.|++||++.++++..+.. ...|.+++
T Consensus       187 ~~~~h~~-------------------------~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~  241 (410)
T 1vyh_C          187 TMHGHDH-------------------------NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR  241 (410)
T ss_dssp             CCCCCSS-------------------------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred             EEcCCCC-------------------------CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEE
Confidence            9999987                         788889999999999999999999999999999998875 57899999


Q ss_pred             EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecC--------------------
Q psy10063        525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD--------------------  584 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd--------------------  584 (894)
                      |+++|.+|++++.++.              |++||+..++++..+.+|...|.+++|+|+                    
T Consensus       242 ~~~~g~~l~s~s~D~~--------------v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (410)
T 1vyh_C          242 PNQDGTLIASCSNDQT--------------VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP  307 (410)
T ss_dssp             ECTTSSEEEEEETTSC--------------EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------
T ss_pred             ECCCCCEEEEEcCCCe--------------EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCC
Confidence            9999999999999997              899999999999999999999999999996                    


Q ss_pred             CCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEec
Q psy10063        585 GKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTK  664 (894)
Q Consensus       585 g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~  664 (894)
                      |.+|++|+.||.|++||++.++.+                                                        
T Consensus       308 g~~l~sgs~D~~i~iwd~~~~~~~--------------------------------------------------------  331 (410)
T 1vyh_C          308 GPFLLSGSRDKTIKMWDVSTGMCL--------------------------------------------------------  331 (410)
T ss_dssp             CCEEEEEETTSEEEEEETTTTEEE--------------------------------------------------------
T ss_pred             CCEEEEEeCCCeEEEEECCCCceE--------------------------------------------------------
Confidence            678999999999999998653210                                                        


Q ss_pred             hhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCc
Q psy10063        665 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT  744 (894)
Q Consensus       665 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~  744 (894)
                                                                                                      
T Consensus       332 --------------------------------------------------------------------------------  331 (410)
T 1vyh_C          332 --------------------------------------------------------------------------------  331 (410)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec---cccCCCceEeecCCCeEEEEecCC
Q psy10063        745 PFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTK  821 (894)
Q Consensus       745 ~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~  821 (894)
                               ..+.+|...|.+++|+|++++|++|+.|+.|++||+..++.+..   +...+..++|++++.++++++.|+
T Consensus       332 ---------~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~  402 (410)
T 1vyh_C          332 ---------MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ  402 (410)
T ss_dssp             ---------EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTS
T ss_pred             ---------EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence                     02335777899999999999999999999999999988776443   344566788999999999999998


Q ss_pred             CCceeEEEeecC
Q psy10063        822 VGKFDARFYHLI  833 (894)
Q Consensus       822 ~g~~~I~vwd~~  833 (894)
                          .|+||+++
T Consensus       403 ----~i~vW~~r  410 (410)
T 1vyh_C          403 ----TVKVWECR  410 (410)
T ss_dssp             ----EEEEEC--
T ss_pred             ----cEEEEeCC
Confidence                69999863

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.1e-34  Score=322.34  Aligned_cols=298  Identities=14%  Similarity=0.078  Sum_probs=223.0

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      +..|.+.|.+++|+|+|++|++|+.|+.|+|||+..+  +++..+.+|..                         .|.++
T Consensus         7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~-------------------------~v~~~   61 (377)
T 3dwl_C            7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK-------------------------IVTCV   61 (377)
T ss_dssp             EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS-------------------------CEEEE
T ss_pred             EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc-------------------------eEEEE
Confidence            4457789999999999999999999999999999988  77888888887                         78888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCc---EEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQ---LLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      +|+|++++|++++.|+.|+|||++.++   .+..+ .|...|.+++|+|++++|++++.++.              |++|
T Consensus        62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~iw  127 (377)
T 3dwl_C           62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV--------------ISVC  127 (377)
T ss_dssp             EECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC--------------EEEC
T ss_pred             EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe--------------EEEE
Confidence            999999999999999999999999887   34443 46789999999999999999999997              8888


Q ss_pred             eccccc---eEEEccC-CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        559 HLIFEE---EFARIKG-HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       559 d~~~~~---~~~~l~~-h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      |++.++   .+..+.+ |...|.+++|+|++++|++++.||.|++||++.........                      
T Consensus       128 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------------------  185 (377)
T 3dwl_C          128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPE----------------------  185 (377)
T ss_dssp             CC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCC----------------------
T ss_pred             EECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcc----------------------
Confidence            888776   4677777 99999999999999999999999999999986542110000                      


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                                               ...|                 +.                   .+.          
T Consensus       186 -------------------------~~~~-----------------~~-------------------~~~----------  194 (377)
T 3dwl_C          186 -------------------------ASVW-----------------GS-------------------RLP----------  194 (377)
T ss_dssp             -------------------------SCSS-----------------CS-------------------CCC----------
T ss_pred             -------------------------cccc-----------------cc-------------------ccc----------
Confidence                                     0000                 00                   000          


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                        .+.....+ +|...|.+++|+|++++|++++.|+.|+|||+..++.
T Consensus       195 ----------------------------------~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~  239 (377)
T 3dwl_C          195 ----------------------------------FNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ  239 (377)
T ss_dssp             ----------------------------------EEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred             ----------------------------------hhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence                                              00001122 6888899999999999999999999999999988765


Q ss_pred             ----ee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc--ee---------------------------
Q psy10063        795 ----TA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE--EF---------------------------  838 (894)
Q Consensus       795 ----~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~--~l---------------------------  838 (894)
                          +.   .+...+..++|++++++|++++.++     +.+|+...+.  ..                           
T Consensus       240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (377)
T 3dwl_C          240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-----PILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGP  314 (377)
T ss_dssp             CEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-----EEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---
T ss_pred             cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-----EEEEEeCCCceEEEeeecccccccccccccccccccccccc
Confidence                33   3334456788999999998887664     5677765211  00                           


Q ss_pred             -------e----------------eccCCCCCeeEEEEeeCC-c---EEEEecCCCcEEEEec
Q psy10063        839 -------A----------------RIKGHFGPINSLAFHPDG-K---SYASGGEDGFVRLHTF  874 (894)
Q Consensus       839 -------~----------------~l~gH~~~V~~l~fSpdg-~---~LaS~s~Dg~V~vWdl  874 (894)
                             .                ...+|...|.+|++.++. .   +|++||.||.|+||++
T Consensus       315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          315 VSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             ----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                   0                012399999999976644 3   6999999999999986

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.8e-32  Score=298.21  Aligned_cols=279  Identities=16%  Similarity=0.199  Sum_probs=225.2

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC--CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG--HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~--h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      +.+|+||+++ +|++| .|+.|+|||+.+|++++.+..  |..                         .|.+|+|+|+++
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~-------------------------~V~~v~~~~~~~   80 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGE-------------------------YISSVAWIKEGN   80 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTC-------------------------CEEEEEECTTSS
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCC-------------------------eEEEEEECCCCC
Confidence            5789999986 77776 489999999999999887764  444                         689999999999


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ceEE
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EEFA  567 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~~~  567 (894)
                      +|++|+.||.|+|||++++++++.+..+ ..+.+  +++++..|++++.++.              +++|+...+ ..+.
T Consensus        81 ~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~--~~~~~~~l~s~~~~~~--------------~~~~~~~~~~~~~~  144 (318)
T 4ggc_A           81 YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS--LSWNSYILSSGSRSGH--------------IHHHDVRVAEHHVA  144 (318)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE--EEEETTEEEEEETTSE--------------EEEEETTSSSCEEE
T ss_pred             EEEEEECCCcEEEeecCCceeEEEecCccceEEE--eecCCCEEEEEecCCc--------------eEeeecCCCceeEE
Confidence            9999999999999999999999988764 45554  4556789999999886              666766654 4566


Q ss_pred             EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCC
Q psy10063        568 RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTG  647 (894)
Q Consensus       568 ~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~  647 (894)
                      .+.+|...+.+++|++++++|++++.||.|++||++.++....                                     
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-------------------------------------  187 (318)
T 4ggc_A          145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV-------------------------------------  187 (318)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC-------------------------------------
T ss_pred             EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc-------------------------------------
Confidence            7889999999999999999999999999999999876432100                                     


Q ss_pred             eeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcc
Q psy10063        648 GVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQ  727 (894)
Q Consensus       648 ~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~  727 (894)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (318)
T 4ggc_A          188 --------------------------------------------------------------------------------  187 (318)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE---EEecCCCcEEEEEccCCceeeccc--cCC
Q psy10063        728 QSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL---ALALADKVSERYRDRKNKATAGFL--LSC  802 (894)
Q Consensus       728 ~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L---atgs~Dg~I~iwd~~~~~~~~~~~--~~~  802 (894)
                                              .......|...|.++++++++..+   ++++.++.|++|+...........  ..+
T Consensus       188 ------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v  243 (318)
T 4ggc_A          188 ------------------------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV  243 (318)
T ss_dssp             ------------------------CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCE
T ss_pred             ------------------------ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeee
Confidence                                    000122344556777777765533   467889999999998887755443  334


Q ss_pred             CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      ..++|++++..++++++...+  .|+|||+.+++++..+++|.+.|.+|+|+|||++||+||.||.|+|||+.+
T Consensus       244 ~~~~~~~~~~~~~~~sg~~d~--~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          244 CSILWSPHYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE  315 (318)
T ss_dssp             EEEEEETTTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred             eeeeecccccceEEEEEcCCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence            567799999999988765433  699999999999999999999999999999999999999999999999965

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=9.4e-34  Score=316.65  Aligned_cols=293  Identities=12%  Similarity=0.055  Sum_probs=221.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCC-------cEEEEecCCCeE----------EEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKG-------DICTWDLRMGRE----------LESISGHAKEPINDMQFSKDATMFITA  470 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg-------~I~iWd~~tg~~----------~~~l~~h~~~~V~~v~~spdg~~la~~  470 (894)
                      -..+|.||+|+|||++|++|+.|.       .|+||++..+..          ...|.+|.. .|.+++++  +..++++
T Consensus        13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~-~v~s~~~~--~~~~~~g   89 (365)
T 4h5i_A           13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDD-SPTAIDAS--KGIILVG   89 (365)
T ss_dssp             CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSC-CCCEEEEE--TTEEEEE
T ss_pred             CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCC-ceEEEEeC--CCEEEEE
Confidence            346899999999999999997654       499999876532          123556666 66666553  4445444


Q ss_pred             eCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-EE---EEe------CCCCeeEEEEcCCCCEEEEEEC--C
Q psy10063        471 SHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL-LK---TYT------TERPVNSAALSPILPHVVLGGG--Q  538 (894)
Q Consensus       471 ~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-~~---~~~------~~~~v~~l~~spdg~~l~~~~~--~  538 (894)
                      ..             .++.+|++++.|+.||+|++..+.. +.   ...      ++..+.+++|+|||++|+++++  +
T Consensus        90 ~~-------------~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d  156 (365)
T 4h5i_A           90 CN-------------ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVP  156 (365)
T ss_dssp             CC-------------CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSS
T ss_pred             EC-------------CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCC
Confidence            33             2344566777899999999875432 22   111      1245889999999999987764  3


Q ss_pred             CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeE
Q psy10063        539 EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSST  618 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~  618 (894)
                      +.              |++||+++++++..+. |.+.|.+|+|+|||++|++++.+ .+++|+...++.+.         
T Consensus       157 ~~--------------i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~---------  211 (365)
T 4h5i_A          157 AI--------------MRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIA---------  211 (365)
T ss_dssp             CE--------------EEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEE---------
T ss_pred             CE--------------EEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCccee---------
Confidence            43              8999999999998885 77889999999999999999855 46666654332100         


Q ss_pred             ECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEec
Q psy10063        619 QQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT  698 (894)
Q Consensus       619 ~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s  698 (894)
                                      .                                                               
T Consensus       212 ----------------~---------------------------------------------------------------  212 (365)
T 4h5i_A          212 ----------------R---------------------------------------------------------------  212 (365)
T ss_dssp             ----------------E---------------------------------------------------------------
T ss_pred             ----------------e---------------------------------------------------------------
Confidence                            0                                                               


Q ss_pred             cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe
Q psy10063        699 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA  778 (894)
Q Consensus       699 ~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg  778 (894)
                                                                             ....+|...|.+++|+|++.+|+++
T Consensus       213 -------------------------------------------------------~~~~~~~~~v~~v~fspdg~~l~~~  237 (365)
T 4h5i_A          213 -------------------------------------------------------KTDFDKNWSLSKINFIADDTVLIAA  237 (365)
T ss_dssp             -------------------------------------------------------ECCCCTTEEEEEEEEEETTEEEEEE
T ss_pred             -------------------------------------------------------eecCCCCCCEEEEEEcCCCCEEEEE
Confidence                                                                   0112355668899999999999999


Q ss_pred             cCCC----cEEEEEccCCce-------eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-ccCCCC
Q psy10063        779 LADK----VSERYRDRKNKA-------TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-IKGHFG  846 (894)
Q Consensus       779 s~Dg----~I~iwd~~~~~~-------~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-l~gH~~  846 (894)
                      +.|+    .|++|++.....       +..+...+.+++|+|||++|++++.|+    .|+|||+++++++.. +.+|..
T Consensus       238 s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~----~V~iwd~~~~~~~~~~~~gH~~  313 (365)
T 4h5i_A          238 SLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN----SIALVKLKDLSMSKIFKQAHSF  313 (365)
T ss_dssp             EESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS----CEEEEETTTTEEEEEETTSSSS
T ss_pred             ecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC----EEEEEECCCCcEEEEecCcccC
Confidence            9887    588898766543       223344566788999999999999998    599999999999987 579999


Q ss_pred             CeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063        847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      .|++|+|||||++|||||.|++||||++.....
T Consensus       314 ~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~  346 (365)
T 4h5i_A          314 AITEVTISPDSTYVASVSAANTIHIIKLPLNYA  346 (365)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred             CEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence            999999999999999999999999999975543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-32  Score=311.69  Aligned_cols=296  Identities=11%  Similarity=0.108  Sum_probs=236.2

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC-CCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG-HAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~-h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ...+...+|...+.+.+++.++..|++++.|+.|+|||+.+++.+..+.. |..                         .
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~-------------------------~  136 (401)
T 4aez_A           82 ERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDEST-------------------------Y  136 (401)
T ss_dssp             SEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTC-------------------------C
T ss_pred             ceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCC-------------------------C
Confidence            33445557776654444444456688888999999999999998887776 554                         7


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      |.+++|+|++++|++|+.||.|+|||+..++++..+. |...|.+++|  ++.+|++++.++.              |++
T Consensus       137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~--------------i~i  200 (401)
T 4aez_A          137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGA--------------IHH  200 (401)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSE--------------EEE
T ss_pred             EEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCC--------------EEE
Confidence            8889999999999999999999999999999998887 4688999999  5679999999986              889


Q ss_pred             Eecc-ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        558 YHLI-FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       558 wd~~-~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      ||++ .+..+..+.+|.+.|.+++|+|++.+|++|+.||.|++||++.++.+                            
T Consensus       201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~----------------------------  252 (401)
T 4aez_A          201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK----------------------------  252 (401)
T ss_dssp             EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE----------------------------
T ss_pred             EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc----------------------------
Confidence            9998 56678888999999999999999999999999999999998643210                            


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       253 --------------------------------------------------------------------------------  252 (401)
T 4aez_A          253 --------------------------------------------------------------------------------  252 (401)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EEEEec--CCCcEEEEEccCCc
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALAL--ADKVSERYRDRKNK  793 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs--~Dg~I~iwd~~~~~  793 (894)
                                                           ..+..|...|.+++|+|++. +|++++  .|+.|++||+..++
T Consensus       253 -------------------------------------~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~  295 (401)
T 4aez_A          253 -------------------------------------FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA  295 (401)
T ss_dssp             -------------------------------------EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred             -------------------------------------EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence                                                 01224666788999999865 455544  79999999999888


Q ss_pred             eeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee--eccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        794 ATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       794 ~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~--~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      .+..+..  .+..++|++++.+++++++...|  .|+|||+..++...  .+.+|...|.+++|+|||++|++++.||.|
T Consensus       296 ~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i  373 (401)
T 4aez_A          296 RVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENL  373 (401)
T ss_dssp             EEEEEECSSCEEEEEECSSSSEEEEEECTTTC--EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEE
T ss_pred             EEEEEeCCCcEEEEEECCCCCeEEEEeecCCC--cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence            7665543  35578899999999997643322  69999999865554  467999999999999999999999999999


Q ss_pred             EEEecCcccccccc
Q psy10063        870 RLHTFDQAYFDYTF  883 (894)
Q Consensus       870 ~vWdl~~~~~~~~~  883 (894)
                      +||++..++.+...
T Consensus       374 ~iw~~~~~~~~~~~  387 (401)
T 4aez_A          374 KFWRVYDGDHVKRP  387 (401)
T ss_dssp             EEEECCC-------
T ss_pred             EEEECCCCcccccc
Confidence            99999988776654

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=5.4e-32  Score=310.61  Aligned_cols=319  Identities=17%  Similarity=0.229  Sum_probs=251.6

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ...+.+|.+.|.. +++++|++|++|+.||.|+|||+.+++++..+.+|..                         .|.+
T Consensus       111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-------------------------~v~~  164 (445)
T 2ovr_B          111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-------------------------GVWS  164 (445)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSS-------------------------CEEE
T ss_pred             eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC-------------------------CEEE
Confidence            3467899987643 3556799999999999999999999999999999988                         6777


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      ++|+  +.+|++|+.||.|++||+.+++++..+.. ...|.+++|+  +.+|++++.++.              |++||+
T Consensus       165 ~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~--------------i~~wd~  226 (445)
T 2ovr_B          165 SQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDAT--------------LRVWDI  226 (445)
T ss_dssp             EEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE--------------EEEEES
T ss_pred             EEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCE--------------EEEEEC
Confidence            7776  56899999999999999999999998874 5789999995  678999999986              899999


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      ..++.+..+.+|...|.+++|  ++.+|++|+.||.|++||++.++.+..               +..+.+.+..+..  
T Consensus       227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~---------------~~~~~~~v~~~~~--  287 (445)
T 2ovr_B          227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT---------------LQGHTNRVYSLQF--  287 (445)
T ss_dssp             SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEE---------------ECCCSSCEEEEEE--
T ss_pred             CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEE---------------ecCCCCceEEEEE--
Confidence            999999999999999999999  788999999999999999976643211               0011122222221  


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                          ++..+++++  .++.+++|+..                                                      
T Consensus       288 ----~~~~l~~~~--~d~~i~i~d~~------------------------------------------------------  307 (445)
T 2ovr_B          288 ----DGIHVVSGS--LDTSIRVWDVE------------------------------------------------------  307 (445)
T ss_dssp             ----CSSEEEEEE--TTSCEEEEETT------------------------------------------------------
T ss_pred             ----CCCEEEEEe--CCCeEEEEECC------------------------------------------------------
Confidence                334455554  45556665522                                                      


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL  800 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~  800 (894)
                                           .       ++....+.+|...+.++.+  ++.+|++++.||.|++||++.++.+..+..
T Consensus       308 ---------------------~-------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  357 (445)
T 2ovr_B          308 ---------------------T-------GNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQG  357 (445)
T ss_dssp             ---------------------T-------CCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECS
T ss_pred             ---------------------C-------CCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEcc
Confidence                                 1       1111234456677777776  467999999999999999998887766543


Q ss_pred             ----CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-----cCCCCCeeEEEEeeCCcEEEEecCCCc---
Q psy10063        801 ----SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-----KGHFGPINSLAFHPDGKSYASGGEDGF---  868 (894)
Q Consensus       801 ----~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-----~gH~~~V~~l~fSpdg~~LaS~s~Dg~---  868 (894)
                          .....++..++.++++++.++    .|+|||+..++++..+     .+|.+.|.+|+|+|++.+|++|+.||.   
T Consensus       358 ~~~~~~~v~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~  433 (445)
T 2ovr_B          358 PNKHQSAVTCLQFNKNFVITSSDDG----TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET  433 (445)
T ss_dssp             TTSCSSCEEEEEECSSEEEEEETTS----EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC
T ss_pred             CCCCCCCEEEEEECCCEEEEEeCCC----eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCcc
Confidence                122334566789999999887    6999999999998887     578899999999999999999999998   


Q ss_pred             -EEEEecCcc
Q psy10063        869 -VRLHTFDQA  877 (894)
Q Consensus       869 -V~vWdl~~~  877 (894)
                       |.|||++..
T Consensus       434 ~l~v~df~~~  443 (445)
T 2ovr_B          434 KLLVLDFDVD  443 (445)
T ss_dssp             EEEEEECCCC
T ss_pred             EEEEEECCCC
Confidence             999999864

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=7e-33  Score=306.73  Aligned_cols=268  Identities=14%  Similarity=0.074  Sum_probs=213.2

Q ss_pred             ceeeeeccCccEEEecCCCeEE------E---------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC
Q psy10063        381 DRLNSMSPAARKLATNAEPVVK------M---------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR  439 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~~~~------~---------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~  439 (894)
                      ...++|++||++|+.+++..++      .               ....|...|.+|+|+|++ +|++|+.||.|+|||+.
T Consensus        33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~  111 (344)
T 4gqb_B           33 LEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWELD  111 (344)
T ss_dssp             EEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEecc
Confidence            4567899999999877642211      1               122356789999999985 68899999999999999


Q ss_pred             CCeEEEE----ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe
Q psy10063        440 MGRELES----ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT  515 (894)
Q Consensus       440 tg~~~~~----l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~  515 (894)
                      +++.+..    +.+|.+                         .|.+|+|+|+|++|++|+.|+.|+|||++++++++.+.
T Consensus       112 ~~~~~~~~~~~~~~H~~-------------------------~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~  166 (344)
T 4gqb_B          112 ENETLIVSKFCKYEHDD-------------------------IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR  166 (344)
T ss_dssp             TTSSCEEEEEEEECCSS-------------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             CCCceeEeeccccCCCC-------------------------CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence            8876443    347776                         78899999999999999999999999999999999998


Q ss_pred             C-CCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecC-CCEEEE
Q psy10063        516 T-ERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPD-GKSYAS  590 (894)
Q Consensus       516 ~-~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spd-g~~l~s  590 (894)
                      + ...|.+++|++++. +|++++.|+.              |++||++.++.+..+.  .|...+.+++|+|+ +++|++
T Consensus       167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~--------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s  232 (344)
T 4gqb_B          167 AHAAQVTCVAASPHKDSVFLSCSEDNR--------------ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF  232 (344)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSC--------------EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred             CcCCceEEEEecCCCCCceeeeccccc--------------cccccccccceeeeeecceeeccceeeeecCCCCcceEE
Confidence            4 68999999999985 6788888887              8999999999888774  45667999999985 568899


Q ss_pred             EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHH
Q psy10063        591 GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEM  670 (894)
Q Consensus       591 gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~  670 (894)
                      |+.||.|+|||++.++.+                                                              
T Consensus       233 g~~dg~v~~wd~~~~~~~--------------------------------------------------------------  250 (344)
T 4gqb_B          233 GDENGTVSLVDTKSTSCV--------------------------------------------------------------  250 (344)
T ss_dssp             EETTSEEEEEESCC--CC--------------------------------------------------------------
T ss_pred             eccCCcEEEEECCCCcEE--------------------------------------------------------------
Confidence            999999999998654211                                                              


Q ss_pred             hhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCC
Q psy10063        671 ARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDG  750 (894)
Q Consensus       671 ~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg  750 (894)
                                                                                                      
T Consensus       251 --------------------------------------------------------------------------------  250 (344)
T 4gqb_B          251 --------------------------------------------------------------------------------  250 (344)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcceecCCCCceEEEeeCCCC-CEEEEecCCCcEEEEEccCCceee--ccccCCCceEeecCCCeE-EEEecCCCCcee
Q psy10063        751 SDTPILAGPVDIGFKMPEPPKR-EKLALALADKVSERYRDRKNKATA--GFLLSCPDFLFDFDTTRE-VTTTSTKVGKFD  826 (894)
Q Consensus       751 ~~~~~~~~h~~~v~~la~spdg-~~Latgs~Dg~I~iwd~~~~~~~~--~~~~~~~~~~fS~dg~~l-~~as~d~~g~~~  826 (894)
                         ..+.+|...|.+|+|+|++ .+||+|+.|+.|+|||+..++++.  .+...+..++|+|++..+ ++++.|+    .
T Consensus       251 ---~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~----~  323 (344)
T 4gqb_B          251 ---LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH----Q  323 (344)
T ss_dssp             ---EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS----C
T ss_pred             ---EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC----e
Confidence               1234577889999999997 579999999999999998887643  344456678899999865 4677777    5


Q ss_pred             EEEeecCCcce
Q psy10063        827 ARFYHLIFEEE  837 (894)
Q Consensus       827 I~vwd~~tg~~  837 (894)
                      |++|++....+
T Consensus       324 v~~w~v~~~~~  334 (344)
T 4gqb_B          324 VVHHVVPTEPL  334 (344)
T ss_dssp             EEEEECCC---
T ss_pred             EEEEECCCCCC
Confidence            99999986543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-34  Score=332.90  Aligned_cols=323  Identities=13%  Similarity=0.074  Sum_probs=215.7

Q ss_pred             CCCCEEEEEEccCC---------CEEEE-------------------ecCCCcEEEEecCCCeEE----EEecCCCCCCe
Q psy10063        408 QSAKITSLLWGNLD---------QYIIT-------------------GHAKGDICTWDLRMGREL----ESISGHAKEPI  455 (894)
Q Consensus       408 H~~~V~~l~~spdg---------~~L~s-------------------gs~Dg~I~iWd~~tg~~~----~~l~~h~~~~V  455 (894)
                      +.+.|.+|+|+|++         ++||+                   ++.|+.|+|||+..+++.    ..+.+|.+ .|
T Consensus       132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~-~V  210 (524)
T 2j04_B          132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG-EV  210 (524)
T ss_dssp             CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC-SE
T ss_pred             CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC-cE
Confidence            56778888888775         55655                   557889999999877642    34555655 45


Q ss_pred             eEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE-----------EEEEe-CCCCeeEE
Q psy10063        456 NDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL-----------LKTYT-TERPVNSA  523 (894)
Q Consensus       456 ~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-----------~~~~~-~~~~v~~l  523 (894)
                      .+|+|+|++.                  +++++.+||+++.||.|+|||+..+++           ...+. |...|.++
T Consensus       211 ~~v~wsp~~~------------------~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv  272 (524)
T 2j04_B          211 WDLKWHEGCH------------------APHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTF  272 (524)
T ss_dssp             EEEEECSSCC------------------CSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEE
T ss_pred             EEEEECCCCC------------------CCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEE
Confidence            5555554320                  123468999999999999999987642           12444 45789999


Q ss_pred             EEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEccCCCCCeEEE--EEecCC-CEEEEEeCCCcEEE
Q psy10063        524 ALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARIKGHFGPINSL--AFHPDG-KSYASGGEDGFLIS  599 (894)
Q Consensus       524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l~~h~~~V~~l--~~spdg-~~l~sgs~Dg~I~v  599 (894)
                      +|+++ .+|++|+.|+.              |++||++.+. .+..+.+|...|.+|  +|+++| .+|++|+.||.|+|
T Consensus       273 ~~s~~-~~lasgs~Dgt--------------V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl  337 (524)
T 2j04_B          273 DFLSP-TTVVCGFKNGF--------------VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI  337 (524)
T ss_dssp             EESSS-SEEEEEETTSE--------------EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred             EecCC-CeEEEEeCCCE--------------EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence            99986 48999999997              8999998763 455688999999999  578888 89999999999999


Q ss_pred             EECCCCccccC----C--CceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhh
Q psy10063        600 NTLSNGLDISE----G--SFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARN  673 (894)
Q Consensus       600 wdl~~~~~~~~----~--~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~  673 (894)
                      ||++.++.+..    .  ..+..++|+|++..+                       ++++  .+..|++|+..       
T Consensus       338 WD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l-----------------------~s~~--~d~tv~lwd~~-------  385 (524)
T 2j04_B          338 FNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY-----------------------IYSD--GASSLRAVPSR-------  385 (524)
T ss_dssp             ECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE-----------------------EEEC--SSSEEEEEETT-------
T ss_pred             EECCCCCcccccccccccCcccceEeCCCcCeE-----------------------EEeC--CCCcEEEEECc-------
Confidence            99987653210    0  123445555544333                       2222  33445554411       


Q ss_pred             cccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc
Q psy10063        674 RMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT  753 (894)
Q Consensus       674 ~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~  753 (894)
                                                                                          .       +...
T Consensus       386 --------------------------------------------------------------------~-------~~~~  390 (524)
T 2j04_B          386 --------------------------------------------------------------------A-------AFAV  390 (524)
T ss_dssp             --------------------------------------------------------------------C-------TTCC
T ss_pred             --------------------------------------------------------------------c-------cccc
Confidence                                                                                1       1122


Q ss_pred             ceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc--------CCCceEeecCCCeEEEEecCCCCce
Q psy10063        754 PILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL--------SCPDFLFDFDTTREVTTTSTKVGKF  825 (894)
Q Consensus       754 ~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~--------~~~~~~fS~dg~~l~~as~d~~g~~  825 (894)
                      ..+.+|.+.|.+|+|+|++.+||+|+.|+.|+||++... .+..+..        .+..++|+++|..+..  .+.    
T Consensus       391 ~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~~----  463 (524)
T 2j04_B          391 HPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DSS----  463 (524)
T ss_dssp             EEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE--CCC----
T ss_pred             eeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc--cCC----
Confidence            345679999999999999999999999999999997653 2222211        1235678999884422  221    


Q ss_pred             eEEEeecC-CcceeeeccCCCCCeeEEEEeeCCc---EEEEecCCCcEEEEecCcccc
Q psy10063        826 DARFYHLI-FEEEFARIKGHFGPINSLAFHPDGK---SYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       826 ~I~vwd~~-tg~~l~~l~gH~~~V~~l~fSpdg~---~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                       +++|+.. .++++..+.+|...|.+|+|+|++.   +||+|+.||.||||+++....
T Consensus       464 -~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~~  520 (524)
T 2j04_B          464 -YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEHH  520 (524)
T ss_dssp             -CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC--
T ss_pred             -ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccccc
Confidence             3445443 5778888999999999999999964   999999999999999986644

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.9e-32  Score=309.32  Aligned_cols=281  Identities=19%  Similarity=0.214  Sum_probs=226.3

Q ss_pred             CccceeeeeccCccEEEecCCCeEEE----------EEecCC------------------CCEEEEEEccCCCEEEEecC
Q psy10063        378 LSVDRLNSMSPAARKLATNAEPVVKM----------QVTDQS------------------AKITSLLWGNLDQYIITGHA  429 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~~~~~----------~l~~H~------------------~~V~~l~~spdg~~L~sgs~  429 (894)
                      ......++|+|||++|+.+....+++          .+.+|.                  ..|.+++|+|||++|++|+.
T Consensus        64 ~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~  143 (393)
T 1erj_A           64 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE  143 (393)
T ss_dssp             SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred             CCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence            34456678999999999876543332          343443                  24999999999999999999


Q ss_pred             CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc
Q psy10063        430 KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ  509 (894)
Q Consensus       430 Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~  509 (894)
                      |+.|+|||+.+++.+..+.+|..                         .|.+++|+|++++|++++.|+.|+|||+++++
T Consensus       144 d~~i~iwd~~~~~~~~~~~~h~~-------------------------~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~  198 (393)
T 1erj_A          144 DRLIRIWDIENRKIVMILQGHEQ-------------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ  198 (393)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSS-------------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             CCeEEEEECCCCcEEEEEccCCC-------------------------CEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence            99999999999999999999988                         78889999999999999999999999999999


Q ss_pred             EEEEEeCCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc-------cCCCCCeEEEEE
Q psy10063        510 LLKTYTTERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI-------KGHFGPINSLAF  581 (894)
Q Consensus       510 ~~~~~~~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-------~~h~~~V~~l~~  581 (894)
                      ++..+.++..+.+++|+| ++++|++++.++.              |++||++.++.+..+       .+|...|.+++|
T Consensus       199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~--------------v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~  264 (393)
T 1erj_A          199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRA--------------VRVWDSETGFLVERLDSENESGTGHKDSVYSVVF  264 (393)
T ss_dssp             EEEEEECSSCEEEEEECSTTCCEEEEEETTSC--------------EEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred             eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCc--------------EEEEECCCCcEEEeecccccCCCCCCCCEEEEEE
Confidence            999999989999999999 8999999999997              888998888877766       579999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceE
Q psy10063        582 HPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVE  661 (894)
Q Consensus       582 spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~  661 (894)
                      +|+|++|++|+.||.|++||++........                         ..                       
T Consensus       265 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~-------------------------~~-----------------------  296 (393)
T 1erj_A          265 TRDGQSVVSGSLDRSVKLWNLQNANNKSDS-------------------------KT-----------------------  296 (393)
T ss_dssp             CTTSSEEEEEETTSEEEEEEC-----------------------------------------------------------
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCCCcccc-------------------------cC-----------------------
Confidence            999999999999999999998653211000                         00                       


Q ss_pred             EechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccc
Q psy10063        662 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI  741 (894)
Q Consensus       662 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~  741 (894)
                                                                                                      
T Consensus       297 --------------------------------------------------------------------------------  296 (393)
T 1erj_A          297 --------------------------------------------------------------------------------  296 (393)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc---ccCCCceEeec------CCC
Q psy10063        742 EGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF---LLSCPDFLFDF------DTT  812 (894)
Q Consensus       742 ~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---~~~~~~~~fS~------dg~  812 (894)
                           ...+.....+.+|.+.|.+++|++++.+|++|+.|+.|++||+..++.+..+   ...+..++|++      ++.
T Consensus       297 -----~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~  371 (393)
T 1erj_A          297 -----PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN  371 (393)
T ss_dssp             ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCE
T ss_pred             -----CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCC
Confidence                 0000011134568888999999999999999999999999999988875543   33344566654      788


Q ss_pred             eEEEEecCCCCceeEEEeecCC
Q psy10063        813 REVTTTSTKVGKFDARFYHLIF  834 (894)
Q Consensus       813 ~l~~as~d~~g~~~I~vwd~~t  834 (894)
                      ++++++.|+    .|+||+++.
T Consensus       372 ~l~sgs~Dg----~i~iW~~~~  389 (393)
T 1erj_A          372 VFATGSGDC----KARIWKYKK  389 (393)
T ss_dssp             EEEEEETTS----EEEEEEEEE
T ss_pred             EEEEECCCC----cEEECcccc
Confidence            899999988    699999864

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=3.9e-32  Score=335.92  Aligned_cols=399  Identities=15%  Similarity=0.167  Sum_probs=298.2

Q ss_pred             CCccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC-eEE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG-REL  444 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg-~~~  444 (894)
                      +......++|+++|++|+.++.+           .....+.+|.+.|.+++|+|++++|++|+.||.|+|||+..+ ...
T Consensus        54 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~  133 (814)
T 3mkq_A           54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE  133 (814)
T ss_dssp             CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred             CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence            33455677899999988877543           233367789999999999999999999999999999999987 778


Q ss_pred             EEecCCCCCCeeEEEEcC-CCCEEEEEeCCCCc-------------------cceEEEEEec--CCCEEEEEECCCCEEE
Q psy10063        445 ESISGHAKEPINDMQFSK-DATMFITASHSQAV-------------------EPINDMQFSK--DATMFITASKDHTAKL  502 (894)
Q Consensus       445 ~~l~~h~~~~V~~v~~sp-dg~~la~~~~d~~i-------------------~~V~~l~~sp--dg~~L~sgs~Dg~V~i  502 (894)
                      ..+.+|.. .|.+++|+| ++.+|++++.++.+                   ..|.+++|+|  ++.+|++++.||.|++
T Consensus       134 ~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~  212 (814)
T 3mkq_A          134 QTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI  212 (814)
T ss_dssp             EEEECCSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEE
T ss_pred             EEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEE
Confidence            88889988 999999999 89999999998866                   4788999999  9999999999999999


Q ss_pred             EEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEE
Q psy10063        503 FTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF  581 (894)
Q Consensus       503 wdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~  581 (894)
                      ||++.++++..+. |...|.+++|+|++++|++++.++.              |++||+..++.+..+..|...|.+++|
T Consensus       213 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------v~vwd~~~~~~~~~~~~~~~~v~~~~~  278 (814)
T 3mkq_A          213 WDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT--------------LKIWNSSTYKVEKTLNVGLERSWCIAT  278 (814)
T ss_dssp             EETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--------------EEEEETTTCSEEEEECCSSSSEEEEEE
T ss_pred             EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe--------------EEEEECCCCcEEEEeecCCCcEEEEEE
Confidence            9999999999888 4688999999999999999999997              899999999999999999999999999


Q ss_pred             ecCCCE-EEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe-----EEEEecccCCCCCCCeeeecccc
Q psy10063        582 HPDGKS-YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH-----IHSLSSHSTSSTDTGGVFSGSRV  655 (894)
Q Consensus       582 spdg~~-l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~-----i~~~~~~~~~~~d~~~i~sgs~~  655 (894)
                      +|+|.. +++++.++.+.+|++....        ..+.++|+|..+......     +........              
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------------  336 (814)
T 3mkq_A          279 HPTGRKNYIASGFDNGFTVLSLGNDE--------PTLSLDPVGKLVWSGGKNAAASDIFTAVIRGN--------------  336 (814)
T ss_dssp             CTTCGGGEEEEEETTEEEEEECSCCS--------CCEEECSSSEEEEECCTTSCTTCEEEEECCSC--------------
T ss_pred             ccCCCceEEEEEeCCCEEEEEcCCCC--------ceeEECCCCCEEEECcccccceeeeeeecccc--------------
Confidence            999873 2444456778999886543        246677777766432211     000000000              


Q ss_pred             CCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcc
Q psy10063        656 DDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPL  735 (894)
Q Consensus       656 ~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l  735 (894)
                             |..             ..+....      .....+   .........+.++++|..+++.. ++       .+
T Consensus       337 -------~~~-------------~~~~~~~------~~~~~~---~~~~~~~~~~~~spdg~~la~~~-~~-------~~  379 (814)
T 3mkq_A          337 -------EEV-------------EQDEPLS------LQTKEL---GSVDVFPQSLAHSPNGRFVTVVG-DG-------EY  379 (814)
T ss_dssp             -------CCC-------------CSSSCBC------CCCEEE---CCCSSCCSEEEECTTSSEEEEEE-TT-------EE
T ss_pred             -------ccc-------------ccCccce------eeeecC---CCCccCCceeEECCCCCEEEEec-CC-------EE
Confidence                   000             0000000      000000   00111123467788888777754 22       23


Q ss_pred             eeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCC---C
Q psy10063        736 MTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDT---T  812 (894)
Q Consensus       736 ~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg---~  812 (894)
                      .+|....            ....+.+.+.+++|+|++++||+++.++.|++|+..     ..+...+..+.|+++|   .
T Consensus       380 ~i~~~~~------------~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~-----~~~~~~v~~~~~s~dg~~~~  442 (814)
T 3mkq_A          380 VIYTALA------------WRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNF-----KEVTSWSVPMHSAIDRLFSG  442 (814)
T ss_dssp             EEEETTT------------TEEEEEEECSEEEECTTSSCEEEECTTCCEEEEETT-----EECTTCCCCCSSCCCEEECS
T ss_pred             EEEECcc------------ccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEECC-----CCccceEEcCCcCccceecc
Confidence            4443110            111234567799999999999999999999999633     2333445677799998   6


Q ss_pred             eEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEe------cCCCcEEEEe
Q psy10063        813 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG------GEDGFVRLHT  873 (894)
Q Consensus       813 ~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~------s~Dg~V~vWd  873 (894)
                      ++++++.++    .|++||+.+++++..+.+|..   .++|+|||++|+++      +.|+.+.+|-
T Consensus       443 ~l~~~~~d~----~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~~  502 (814)
T 3mkq_A          443 ALLGVKSDG----FVYFFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTLLF  502 (814)
T ss_dssp             SSEEEEETT----EEEEECTTTCCEEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEEEE
T ss_pred             eEEEEecCC----EEEEEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEEEe
Confidence            888887776    699999999999999998875   89999999999999      6666555553

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.7e-31  Score=307.78  Aligned_cols=302  Identities=18%  Similarity=0.177  Sum_probs=250.7

Q ss_pred             eEEEEEecCCCCE-EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--
Q psy10063        400 VVKMQVTDQSAKI-TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--  476 (894)
Q Consensus       400 ~~~~~l~~H~~~V-~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--  476 (894)
                      .....+.+|...| .++.|  ++++|++|+.||.|+|||+.+++.+..+.+|.+ .|.+++|++++ +|++++.|+.+  
T Consensus       112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~-~V~~l~~~~~~-~l~s~s~dg~i~v  187 (464)
T 3v7d_B          112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDG-GVWALKYAHGG-ILVSGSTDRTVRV  187 (464)
T ss_dssp             CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECSTT-EEEEEETTSCEEE
T ss_pred             cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCc-CEEEEEEcCCC-EEEEEeCCCCEEE
Confidence            3556788999885 55555  678999999999999999999999999999998 99999999988 99999999887  


Q ss_pred             ----------------cceEEEEEe--cCCCEEEEEECCCCEEEEEcCCCcEE-----------------------EEEe
Q psy10063        477 ----------------EPINDMQFS--KDATMFITASKDHTAKLFTTHDRQLL-----------------------KTYT  515 (894)
Q Consensus       477 ----------------~~V~~l~~s--pdg~~L~sgs~Dg~V~iwdl~~~~~~-----------------------~~~~  515 (894)
                                      ..|.+++|+  +++.+|++|+.||.|++||++.++.+                       ..+.
T Consensus       188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (464)
T 3v7d_B          188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR  267 (464)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred             EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence                            588999998  57899999999999999999877632                       2333


Q ss_pred             -CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        516 -TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       516 -~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                       +...+.++  ++++.+|++++.++.              |++||+..++.+..+.+|...|.+++|++++++|++|+.|
T Consensus       268 ~~~~~v~~~--~~~~~~l~~~~~d~~--------------i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d  331 (464)
T 3v7d_B          268 GHMASVRTV--SGHGNIVVSGSYDNT--------------LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD  331 (464)
T ss_dssp             CCSSCEEEE--EEETTEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred             CccceEEEE--cCCCCEEEEEeCCCe--------------EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC
Confidence             23555555  678999999999997              8999999999999999999999999999999999999999


Q ss_pred             CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhc
Q psy10063        595 GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNR  674 (894)
Q Consensus       595 g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~  674 (894)
                      |.|++||++.++.+                                                                  
T Consensus       332 g~i~vwd~~~~~~~------------------------------------------------------------------  345 (464)
T 3v7d_B          332 TTIRIWDLENGELM------------------------------------------------------------------  345 (464)
T ss_dssp             SCEEEEETTTTEEE------------------------------------------------------------------
T ss_pred             CcEEEEECCCCcEE------------------------------------------------------------------
Confidence            99999998654211                                                                  


Q ss_pred             ccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcc
Q psy10063        675 MSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTP  754 (894)
Q Consensus       675 ~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~  754 (894)
                                                                                                     .
T Consensus       346 -------------------------------------------------------------------------------~  346 (464)
T 3v7d_B          346 -------------------------------------------------------------------------------Y  346 (464)
T ss_dssp             -------------------------------------------------------------------------------E
T ss_pred             -------------------------------------------------------------------------------E
Confidence                                                                                           0


Q ss_pred             eecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeec
Q psy10063        755 ILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHL  832 (894)
Q Consensus       755 ~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~  832 (894)
                      .+.+|...|.+++++  +.+|++++.||.|++||+...+......  .....++|++++.++++++ ++    .|+|||+
T Consensus       347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg----~i~iwd~  419 (464)
T 3v7d_B          347 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-EN----QFNIYNL  419 (464)
T ss_dssp             EECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TT----EEEEEET
T ss_pred             EEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CC----eEEEEEC
Confidence            123466678888887  5899999999999999999877655443  3345678999999999887 44    5999999


Q ss_pred             CCcceeee-ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        833 IFEEEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       833 ~tg~~l~~-l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      ++++++.. +.+|.+.|.+|+|+ +..++++++.||.+.+|-+
T Consensus       420 ~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l  461 (464)
T 3v7d_B          420 RSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL  461 (464)
T ss_dssp             TTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred             CCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence            99999986 77899999999997 4556666777876665544

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=9.3e-33  Score=302.64  Aligned_cols=289  Identities=14%  Similarity=0.072  Sum_probs=240.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      -|.+.|.+++|+|||++|+++..++.+.+|............+|..                         .|.+++|+|
T Consensus         7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~   61 (337)
T 1gxr_A            7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGE-------------------------VVCAVTISN   61 (337)
T ss_dssp             EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSS-------------------------CCCEEEECS
T ss_pred             ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCC-------------------------ceEEEEEec
Confidence            3567899999999999999998888788877665555555557877                         788888999


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcE---EEEE---eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQL---LKTY---TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~---~~~~---~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      ++++|++++ ||.|+|||+..++.   +..+   .+...|.+++|+|++++|++++.++.              |++||+
T Consensus        62 ~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~~~d~  126 (337)
T 1gxr_A           62 PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST--------------LSIWDL  126 (337)
T ss_dssp             SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE--------------EEEEEC
T ss_pred             CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc--------------EEEEEC
Confidence            999999998 99999999987653   3333   35688999999999999999999886              888998


Q ss_pred             cccc--eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        561 IFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       561 ~~~~--~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                      ..++  ....+.+|...|.+++|++++++|++++.||.|++||++.++.+                              
T Consensus       127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~------------------------------  176 (337)
T 1gxr_A          127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV------------------------------  176 (337)
T ss_dssp             CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE------------------------------
T ss_pred             CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCcee------------------------------
Confidence            8776  56677889999999999999999999999999999998653210                              


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (337)
T 1gxr_A          177 --------------------------------------------------------------------------------  176 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF  798 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~  798 (894)
                                                         ..+.+|...|.+++|+|++++|++++.|+.|++||++.++.+..+
T Consensus       177 -----------------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~  221 (337)
T 1gxr_A          177 -----------------------------------RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH  221 (337)
T ss_dssp             -----------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             -----------------------------------eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee
Confidence                                               012235667889999999999999999999999999988876554


Q ss_pred             c--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        799 L--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       799 ~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      .  ..+..++|+++++++++++.++    .|++||+..++.. .+.+|...|.+++|+|++++|++++.||.|+||+++.
T Consensus       222 ~~~~~v~~~~~s~~~~~l~~~~~~~----~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~  296 (337)
T 1gxr_A          222 DFTSQIFSLGYCPTGEWLAVGMESS----NVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY  296 (337)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEETTS----CEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             cCCCceEEEEECCCCCEEEEEcCCC----cEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence            3  3455778999999999998877    5999999987754 6789999999999999999999999999999999998


Q ss_pred             ccccccccc
Q psy10063        877 AYFDYTFDI  885 (894)
Q Consensus       877 ~~~~~~~~~  885 (894)
                      ++.+..+..
T Consensus       297 ~~~~~~~~~  305 (337)
T 1gxr_A          297 GASIFQSKE  305 (337)
T ss_dssp             CCEEEEEEC
T ss_pred             CeEEEEecC
Confidence            887755443

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2e-32  Score=296.54  Aligned_cols=255  Identities=13%  Similarity=0.191  Sum_probs=206.0

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC--CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM--GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t--g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      +.+.+|.+.|.+++|+|+|++||+|+.|+.|+|||+..  ++++..|.+|.+                         .|.
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~-------------------------~V~   57 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEG-------------------------PVW   57 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSS-------------------------CEE
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccC-------------------------CeE
Confidence            46789999999999999999999999999999999974  467889999988                         677


Q ss_pred             EEEEec--CCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcccee
Q psy10063        481 DMQFSK--DATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       481 ~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      +|+|++  ++++|++|+.|+.|+|||++.++  .+..+. |...|.+++|+|+  |.+|++++.++.             
T Consensus        58 ~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~-------------  124 (297)
T 2pm7_B           58 RVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK-------------  124 (297)
T ss_dssp             EEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE-------------
T ss_pred             EEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc-------------
Confidence            788865  48899999999999999999874  445555 5688999999998  899999999997             


Q ss_pred             eEEEEeccccc--eEEEccCCCCCeEEEEEecC-------------CCEEEEEeCCCcEEEEECCCCccccCCCceeeeE
Q psy10063        554 DARFYHLIFEE--EFARIKGHFGPINSLAFHPD-------------GKSYASGGEDGFLISNTLSNGLDISEGSFTSSST  618 (894)
Q Consensus       554 ~v~vwd~~~~~--~~~~l~~h~~~V~~l~~spd-------------g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~  618 (894)
                       |++||++.+.  ....+.+|...|.+++|+|+             +++|++|+.|+.|+|||++.++...         
T Consensus       125 -v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~---------  194 (297)
T 2pm7_B          125 -VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY---------  194 (297)
T ss_dssp             -EEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEE---------
T ss_pred             -EEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE---------
Confidence             7888887653  24567899999999999997             5799999999999999975432000         


Q ss_pred             ECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEec
Q psy10063        619 QQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT  698 (894)
Q Consensus       619 ~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s  698 (894)
                                      .                                                               
T Consensus       195 ----------------~---------------------------------------------------------------  195 (297)
T 2pm7_B          195 ----------------V---------------------------------------------------------------  195 (297)
T ss_dssp             ----------------E---------------------------------------------------------------
T ss_pred             ----------------E---------------------------------------------------------------
Confidence                            0                                                               


Q ss_pred             cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC---CEE
Q psy10063        699 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR---EKL  775 (894)
Q Consensus       699 ~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg---~~L  775 (894)
                                                                           ....+.+|.+.|.+++|+|++   .+|
T Consensus       196 -----------------------------------------------------~~~~l~~H~~~V~~v~~sp~~~~~~~l  222 (297)
T 2pm7_B          196 -----------------------------------------------------LESTLEGHSDWVRDVAWSPTVLLRSYM  222 (297)
T ss_dssp             -----------------------------------------------------EEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred             -----------------------------------------------------EEEEecCCCCceEEEEECCCCCCceEE
Confidence                                                                 001245688899999999994   899


Q ss_pred             EEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063        776 ALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       776 atgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      |+++.|+.|+||++.......                             ...         +....+|...|.+++|+|
T Consensus       223 as~s~D~~v~iWd~~~~~~~~-----------------------------~~~---------~~~~~~~~~~v~~~~~s~  264 (297)
T 2pm7_B          223 ASVSQDRTCIIWTQDNEQGPW-----------------------------KKT---------LLKEEKFPDVLWRASWSL  264 (297)
T ss_dssp             EEEETTSCEEEEEESSTTSCC-----------------------------EEE---------ESSSSCCSSCEEEEEECS
T ss_pred             EEEECCCcEEEEEeCCCCCcc-----------------------------cee---------eeecccCCCcEEEEEECC
Confidence            999999999999865421000                             000         111246788999999999


Q ss_pred             CCcEEEEecCCCcEEEEecC
Q psy10063        856 DGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       856 dg~~LaS~s~Dg~V~vWdl~  875 (894)
                      +|++||+++.||.|+||++.
T Consensus       265 ~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          265 SGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             SSCCEEEEETTSCEEEEEEC
T ss_pred             CCCEEEEEcCCCcEEEEEEC
Confidence            99999999999999999986

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=5.1e-32  Score=300.11  Aligned_cols=289  Identities=14%  Similarity=0.200  Sum_probs=219.4

Q ss_pred             cceeeeeccCccEEEecCCC-eEEE-------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC--eE
Q psy10063        380 VDRLNSMSPAARKLATNAEP-VVKM-------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG--RE  443 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~-~~~~-------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg--~~  443 (894)
                      ....++|+|||++|+.++.+ .+++             .+.+|.+.|.+|+|+|+|++|++|+.|+.|+|||+..+  ++
T Consensus        18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~   97 (345)
T 3fm0_A           18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC   97 (345)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred             cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence            45677899999999877543 2222             23589999999999999999999999999999999876  45


Q ss_pred             EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEe-CCCC
Q psy10063        444 LESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYT-TERP  519 (894)
Q Consensus       444 ~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~-~~~~  519 (894)
                      +..+.+|..                         .|.+|+|+|++++|++|+.|+.|+|||++.++   ++..+. |...
T Consensus        98 ~~~~~~h~~-------------------------~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~  152 (345)
T 3fm0_A           98 VTTLEGHEN-------------------------EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD  152 (345)
T ss_dssp             EEEECCCSS-------------------------CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred             EEEccCCCC-------------------------CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence            788889987                         78889999999999999999999999998764   344454 4678


Q ss_pred             eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc--eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063        520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDGFL  597 (894)
Q Consensus       520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~--~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I  597 (894)
                      |.+++|+|++++|++++.++.              |++||++.++  ++..+.+|...|.+|+|+|+|++|++|+.||.|
T Consensus       153 v~~~~~~p~~~~l~s~s~d~~--------------i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v  218 (345)
T 3fm0_A          153 VKHVVWHPSQELLASASYDDT--------------VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV  218 (345)
T ss_dssp             EEEEEECSSSSCEEEEETTSC--------------EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             eEEEEECCCCCEEEEEeCCCc--------------EEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence            999999999999999999997              7888887764  456788999999999999999999999999999


Q ss_pred             EEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccc
Q psy10063        598 ISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSI  677 (894)
Q Consensus       598 ~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~  677 (894)
                      +||++........                                     ....+.   +..                  
T Consensus       219 ~iW~~~~~~~~~~-------------------------------------~~~~~~---~~~------------------  240 (345)
T 3fm0_A          219 RIWRQYLPGNEQG-------------------------------------VACSGS---DPS------------------  240 (345)
T ss_dssp             EEEEEECTTCTTC-------------------------------------CCCC------CE------------------
T ss_pred             EEeccccCCCCcc-------------------------------------ceeecc---CCc------------------
Confidence            9998632210000                                     000000   000                  


Q ss_pred             cCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee-
Q psy10063        678 NHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL-  756 (894)
Q Consensus       678 ~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~-  756 (894)
                                                                                              ...+..+ 
T Consensus       241 ------------------------------------------------------------------------~~~~~~~~  248 (345)
T 3fm0_A          241 ------------------------------------------------------------------------WKCICTLS  248 (345)
T ss_dssp             ------------------------------------------------------------------------EEEEEEEC
T ss_pred             ------------------------------------------------------------------------cceeEEec
Confidence                                                                                    0000011 


Q ss_pred             cCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce-------e-----eccccCCCceEeecCCC-eEEEEecCCCC
Q psy10063        757 AGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA-------T-----AGFLLSCPDFLFDFDTT-REVTTTSTKVG  823 (894)
Q Consensus       757 ~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~-------~-----~~~~~~~~~~~fS~dg~-~l~~as~d~~g  823 (894)
                      ..|...|++++|++++.+|++++.|+.|++|+......       +     ..+...+..++|+|++. .|++++.|+  
T Consensus       249 ~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg--  326 (345)
T 3fm0_A          249 GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG--  326 (345)
T ss_dssp             SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTS--
T ss_pred             CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCC--
Confidence            23677899999999999999999999999999765421       1     12334556788999985 788888887  


Q ss_pred             ceeEEEeecCCcceeeec
Q psy10063        824 KFDARFYHLIFEEEFARI  841 (894)
Q Consensus       824 ~~~I~vwd~~tg~~l~~l  841 (894)
                        .|+||++..++.+..+
T Consensus       327 --~v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          327 --EVAFWKYQRPEGLHHH  342 (345)
T ss_dssp             --CEEEEEECC-------
T ss_pred             --cEEEEEecCCCCcccc
Confidence              5999999988766544

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.9e-31  Score=292.02  Aligned_cols=242  Identities=20%  Similarity=0.260  Sum_probs=204.3

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..+.+|...|.+++|+|+|++|++|+.|+.|+|||+.++++++.+.+|..                         .|.++
T Consensus        59 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~-------------------------~v~~~  113 (319)
T 3frx_A           59 RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS-------------------------DVMSV  113 (319)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------------------------CEEEE
T ss_pred             eEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC-------------------------cEEEE
Confidence            35789999999999999999999999999999999999999999999988                         78888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCC------CCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPI------LPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spd------g~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      +|+|++.+|++|+.|+.|+|||++.. ++..+. |...|.+++|+|.      +.+|++++.++.              |
T Consensus       114 ~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~--------------i  178 (319)
T 3frx_A          114 DIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM--------------V  178 (319)
T ss_dssp             EECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC------CCEEEEEETTSC--------------E
T ss_pred             EEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE--------------E
Confidence            89999999999999999999999754 454444 5688999999985      458999999997              8


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      ++||+..++.+..+.+|...|.+++|+|+|++|++|+.||.|+|||+..++.+.                          
T Consensus       179 ~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~--------------------------  232 (319)
T 3frx_A          179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY--------------------------  232 (319)
T ss_dssp             EEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE--------------------------
T ss_pred             EEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--------------------------
Confidence            999999999999999999999999999999999999999999999986542110                          


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       233 --------------------------------------------------------------------------------  232 (319)
T 3frx_A          233 --------------------------------------------------------------------------------  232 (319)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                             .+. +...|.+++|+|++.+|++++.++ |++|++.....+
T Consensus       233 ---------------------------------------~~~-~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~  271 (319)
T 3frx_A          233 ---------------------------------------TLS-AQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLV  271 (319)
T ss_dssp             ---------------------------------------EEE-CCSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEE
T ss_pred             ---------------------------------------Eec-CCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeee
Confidence                                                   000 123578899999999999887665 999998876554


Q ss_pred             eccc-----------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        796 AGFL-----------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       796 ~~~~-----------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      ..+.           ..+..++|+|||++|++++.|+    .|+|||+.++
T Consensus       272 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg----~i~vWd~~t~  318 (319)
T 3frx_A          272 DDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN----VIRVWQVMTA  318 (319)
T ss_dssp             EEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS----CEEEEEEEEC
T ss_pred             eccCccccccccCcCcceeEEEECCCCCEEEEeecCc----eEEEEEEeec
Confidence            3321           1233678999999999999998    5999998764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.7e-31  Score=295.12  Aligned_cols=268  Identities=17%  Similarity=0.175  Sum_probs=224.1

Q ss_pred             CCccceeeeeccCccEEEecCCC-eEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC----
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-VVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG----  441 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg----  441 (894)
                      +......++|++||++|+.++.+ .++          ..+..|...|.+++|+|+|++|++|+.|+.|+||++..+    
T Consensus        54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~  133 (340)
T 1got_B           54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV  133 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC
T ss_pred             CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc
Confidence            34455667899999998877654 232          356789999999999999999999999999999999875    


Q ss_pred             eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCe
Q psy10063        442 RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPV  520 (894)
Q Consensus       442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v  520 (894)
                      +....+.+|.+                         .|.+++|++++. |++++.|+.|+|||+++++++..+.. ...|
T Consensus       134 ~~~~~~~~h~~-------------------------~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v  187 (340)
T 1got_B          134 RVSRELAGHTG-------------------------YLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDV  187 (340)
T ss_dssp             EEEEEEECCSS-------------------------CEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred             eeEEEecCCCc-------------------------cEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence            45667778877                         678888887765 88999999999999999999998874 5889


Q ss_pred             eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063        521 NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISN  600 (894)
Q Consensus       521 ~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw  600 (894)
                      .+++|+|++++|++++.++.              |++||++.++++..+.+|...|.+++|+|++++|++|+.||.|++|
T Consensus       188 ~~~~~~~~~~~l~sg~~d~~--------------v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw  253 (340)
T 1got_B          188 MSLSLAPDTRLFVSGACDAS--------------AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF  253 (340)
T ss_dssp             EEEEECTTSSEEEEEETTSC--------------EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             EEEEECCCCCEEEEEeCCCc--------------EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence            99999999999999999997              8999999999999999999999999999999999999999999999


Q ss_pred             ECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCC
Q psy10063        601 TLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHS  680 (894)
Q Consensus       601 dl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~  680 (894)
                      |++.++.+.                         .+.                                           
T Consensus       254 d~~~~~~~~-------------------------~~~-------------------------------------------  265 (340)
T 1got_B          254 DLRADQELM-------------------------TYS-------------------------------------------  265 (340)
T ss_dssp             ETTTTEEEE-------------------------EEC-------------------------------------------
T ss_pred             ECCCCcEEE-------------------------EEc-------------------------------------------
Confidence            986542110                         000                                           


Q ss_pred             CCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCC
Q psy10063        681 GTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPV  760 (894)
Q Consensus       681 g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~  760 (894)
                                                                                                 ...+.
T Consensus       266 ---------------------------------------------------------------------------~~~~~  270 (340)
T 1got_B          266 ---------------------------------------------------------------------------HDNII  270 (340)
T ss_dssp             ---------------------------------------------------------------------------CTTCC
T ss_pred             ---------------------------------------------------------------------------cCCcc
Confidence                                                                                       00122


Q ss_pred             CceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063        761 DIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYH  831 (894)
Q Consensus       761 ~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd  831 (894)
                      ..|.+++|+|++++|++|+.|+.|++||+...+.+.   .+...+..++|+++|.+|++++.|+    .|+|||
T Consensus       271 ~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~----~i~iWd  340 (340)
T 1got_B          271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS----FLKIWN  340 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS----CEEEEC
T ss_pred             cceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCc----cEEecC
Confidence            357899999999999999999999999998877644   3444556788999999999999998    599997

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=8.7e-33  Score=302.33  Aligned_cols=256  Identities=15%  Similarity=0.140  Sum_probs=195.8

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      .+...+.+|.+.|.+|+|+|+|++||+|+.|+.|+|||+..++  ++..+.+|.+                         
T Consensus         4 ~~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~-------------------------   58 (316)
T 3bg1_A            4 VINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEG-------------------------   58 (316)
T ss_dssp             ----------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSS-------------------------
T ss_pred             eeeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc-------------------------
Confidence            3455778999999999999999999999999999999998875  4678889988                         


Q ss_pred             ceEEEEEec--CCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCcc
Q psy10063        478 PINDMQFSK--DATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       478 ~V~~l~~sp--dg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~  550 (894)
                      .|.+|+|++  ++++|++|+.|+.|+|||++.++  .+..+. |...|.+++|+|+  |.+|++++.++.          
T Consensus        59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~----------  128 (316)
T 3bg1_A           59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA----------  128 (316)
T ss_dssp             CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC----------
T ss_pred             cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC----------
Confidence            677888865  48899999999999999999874  455555 5678999999998  789999999997          


Q ss_pred             ceeeEEEEeccccce---EEEccCCCCCeEEEEEecC-----------------CCEEEEEeCCCcEEEEECCCCccccC
Q psy10063        551 GKFDARFYHLIFEEE---FARIKGHFGPINSLAFHPD-----------------GKSYASGGEDGFLISNTLSNGLDISE  610 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~---~~~l~~h~~~V~~l~~spd-----------------g~~l~sgs~Dg~I~vwdl~~~~~~~~  610 (894)
                          |++||+..+..   ...+.+|...|.+++|+|+                 +++|++|+.|+.|+|||++.....  
T Consensus       129 ----i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--  202 (316)
T 3bg1_A          129 ----ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW--  202 (316)
T ss_dssp             ----EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE--
T ss_pred             ----EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc--
Confidence                78888776532   3456789999999999997                 356777777777777776321100  


Q ss_pred             CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063        611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD  690 (894)
Q Consensus       611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~  690 (894)
                                                                                                      
T Consensus       203 --------------------------------------------------------------------------------  202 (316)
T 3bg1_A          203 --------------------------------------------------------------------------------  202 (316)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC
Q psy10063        691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP  770 (894)
Q Consensus       691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp  770 (894)
                                                                                  .....+.+|.+.|.+++|+|
T Consensus       203 ------------------------------------------------------------~~~~~l~~h~~~V~~v~~sp  222 (316)
T 3bg1_A          203 ------------------------------------------------------------KEEQKLEAHSDWVRDVAWAP  222 (316)
T ss_dssp             ------------------------------------------------------------EEEECCBCCSSCEEEEECCC
T ss_pred             ------------------------------------------------------------ceeeecccCCCceEEEEecC
Confidence                                                                        00012356888999999999


Q ss_pred             CC----CEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC
Q psy10063        771 KR----EKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  846 (894)
Q Consensus       771 dg----~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~  846 (894)
                      ++    .+||+++.|+.|+||++......                                       ......+.+|.+
T Consensus       223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~---------------------------------------~~~~~~~~~~~~  263 (316)
T 3bg1_A          223 SIGLPTSTIASCSQDGRVFIWTCDDASSN---------------------------------------TWSPKLLHKFND  263 (316)
T ss_dssp             CSSCSCCEEEEEETTCEEEEEECSSTTCC---------------------------------------CCBCCEEEECSS
T ss_pred             CCCCCCceEEEEcCCCeEEEEEccCcccc---------------------------------------chhhhhhhcCCC
Confidence            86    88999999999999986542100                                       000112346788


Q ss_pred             CeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        847 PINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      .|.+|+|+|+|++||+++.||.|+||++.
T Consensus       264 ~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          264 VVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             CEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             cEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            99999999999999999999999999986

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=8.1e-32  Score=308.31  Aligned_cols=302  Identities=12%  Similarity=0.200  Sum_probs=223.7

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe-----------EEEEecCCCCC--CeeEEEEcCCCCEEEEEeCC
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR-----------ELESISGHAKE--PINDMQFSKDATMFITASHS  473 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~-----------~~~~l~~h~~~--~V~~v~~spdg~~la~~~~d  473 (894)
                      .|.+.|.+|+|+|+|++||+|+.||.|+|||+..++           ++..+.+|...  .+..+.+.            
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~------------   93 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIE------------   93 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEEC------------
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccccc------------
Confidence            367999999999999999999999999999999877           47777777620  00000000            


Q ss_pred             CCccceEEEEEecCC--CEEEEEECCCCEEEEEcCCCcEE---------------------------------------E
Q psy10063        474 QAVEPINDMQFSKDA--TMFITASKDHTAKLFTTHDRQLL---------------------------------------K  512 (894)
Q Consensus       474 ~~i~~V~~l~~spdg--~~L~sgs~Dg~V~iwdl~~~~~~---------------------------------------~  512 (894)
                         ..|.+|+|+|++  .+|++++.|+.|+|||+..++..                                       +
T Consensus        94 ---~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (447)
T 3dw8_B           94 ---EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR  170 (447)
T ss_dssp             ---CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred             ---CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence               168888899887  79999999999999998764432                                       1


Q ss_pred             EE--eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEE-------EccCCCCCeEEEEEe
Q psy10063        513 TY--TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFA-------RIKGHFGPINSLAFH  582 (894)
Q Consensus       513 ~~--~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~-------~l~~h~~~V~~l~~s  582 (894)
                      .+  .|...|.+++|+|++++|+++ .++.              |++||+.. ++.+.       .+.+|...|.+++|+
T Consensus       171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  235 (447)
T 3dw8_B          171 IFANAHTYHINSISINSDYETYLSA-DDLR--------------INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH  235 (447)
T ss_dssp             EECSCCSSCCCEEEECTTSSEEEEE-CSSE--------------EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC
T ss_pred             EeccCCCcceEEEEEcCCCCEEEEe-CCCe--------------EEEEECCCCCceeeeeecccccccccCcceEEEEEC
Confidence            22  256889999999999999998 6776              78888873 34443       367899999999999


Q ss_pred             cCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceE
Q psy10063        583 PDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVE  661 (894)
Q Consensus       583 pdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~  661 (894)
                      |++ .+|++|+.||.|++||++.++....                     .+..+..+.                     
T Consensus       236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~---------------------~~~~~~~~~---------------------  273 (447)
T 3dw8_B          236 PNSCNTFVYSSSKGTIRLCDMRASALCDR---------------------HSKLFEEPE---------------------  273 (447)
T ss_dssp             SSCTTEEEEEETTSCEEEEETTTCSSSCT---------------------TCEEECCC----------------------
T ss_pred             CCCCcEEEEEeCCCeEEEEECcCCccccc---------------------eeeEeccCC---------------------
Confidence            998 9999999999999999976542100                     000000000                     


Q ss_pred             EechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccc
Q psy10063        662 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI  741 (894)
Q Consensus       662 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~  741 (894)
                                                                                                      
T Consensus       274 --------------------------------------------------------------------------------  273 (447)
T 3dw8_B          274 --------------------------------------------------------------------------------  273 (447)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC-CceeeccccC------------------C
Q psy10063        742 EGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK-NKATAGFLLS------------------C  802 (894)
Q Consensus       742 ~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~-~~~~~~~~~~------------------~  802 (894)
                             +......+.+|...|.+++|+|++++|++++. +.|+|||++. ++.+..+...                  .
T Consensus       274 -------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~  345 (447)
T 3dw8_B          274 -------DPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDK  345 (447)
T ss_dssp             -----------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCC
T ss_pred             -------CccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccc
Confidence                   00000123346678999999999999999999 9999999986 5544333221                  1


Q ss_pred             CceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc---------------------------------CCCCCee
Q psy10063        803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK---------------------------------GHFGPIN  849 (894)
Q Consensus       803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~---------------------------------gH~~~V~  849 (894)
                      ..++|++++++|++++.++    .|+|||+..++.+. +.                                 .+...|.
T Consensus       346 ~~~~~s~~~~~l~s~s~dg----~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  420 (447)
T 3dw8_B          346 FECCWNGSDSVVMTGSYNN----FFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL  420 (447)
T ss_dssp             CCEEECTTSSEEEEECSTT----EEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred             eEEEECCCCCEEEEeccCC----EEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence            1289999999999999887    69999999887653 22                                 2345789


Q ss_pred             EEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        850 SLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       850 ~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      +++|+|++.+||+++.++ ++||.-
T Consensus       421 ~~~~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          421 HTAWHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             EEEECSSSSEEEEECSSC-EEEEEC
T ss_pred             EEEECCCCCEEEEEecce-eeeecc
Confidence            999999999999998887 777764

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.8e-33  Score=314.49  Aligned_cols=291  Identities=13%  Similarity=0.178  Sum_probs=236.6

Q ss_pred             CCCCEEEEEEccCCC-EEEEe----------cCCCcEEEEecCCCeE---EEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        408 QSAKITSLLWGNLDQ-YIITG----------HAKGDICTWDLRMGRE---LESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       408 H~~~V~~l~~spdg~-~L~sg----------s~Dg~I~iWd~~tg~~---~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      +...|.+++|+|+|+ +|++|          +.|+.|+|||+..++.   +..+ .|..                     
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~---------------------   68 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDS---------------------   68 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSS---------------------
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCC---------------------
Confidence            445789999999997 99999          8899999999998753   3333 3444                     


Q ss_pred             CCccceEEEEEecCCCEEEEEECCCCEEEEEcCC----CcEEEEEe-CCCCeeEEEEcCC-CCEEEEEECCCCeEEEecc
Q psy10063        474 QAVEPINDMQFSKDATMFITASKDHTAKLFTTHD----RQLLKTYT-TERPVNSAALSPI-LPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~----~~~~~~~~-~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~  547 (894)
                          .|.+++|+|++++|++++.||.|+|||+..    .+++..+. |...|.+++|+|+ +.+|++++.++.       
T Consensus        69 ----~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~-------  137 (416)
T 2pm9_A           69 ----KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE-------  137 (416)
T ss_dssp             ----CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC-------
T ss_pred             ----ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe-------
Confidence                688999999999999999999999999987    34666665 5689999999998 899999999987       


Q ss_pred             CccceeeEEEEeccccc------eEE---EccCCCCCeEEEEEecC-CCEEEEEeCCCcEEEEECCCCccccCCCceeee
Q psy10063        548 TKVGKFDARFYHLIFEE------EFA---RIKGHFGPINSLAFHPD-GKSYASGGEDGFLISNTLSNGLDISEGSFTSSS  617 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~------~~~---~l~~h~~~V~~l~~spd-g~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~  617 (894)
                             |++||+..++      ...   .+.+|...|.+++|+++ +.+|++++.||.|++||++.++.+.        
T Consensus       138 -------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~--------  202 (416)
T 2pm9_A          138 -------IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI--------  202 (416)
T ss_dssp             -------EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE--------
T ss_pred             -------EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce--------
Confidence                   7888887765      322   34679999999999999 7899999999999999997643110        


Q ss_pred             EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063        618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL  697 (894)
Q Consensus       618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  697 (894)
                                       .+...                                                          
T Consensus       203 -----------------~~~~~----------------------------------------------------------  207 (416)
T 2pm9_A          203 -----------------HLSYT----------------------------------------------------------  207 (416)
T ss_dssp             -----------------EECCC----------------------------------------------------------
T ss_pred             -----------------EEecc----------------------------------------------------------
Confidence                             00000                                                          


Q ss_pred             ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC-CEEE
Q psy10063        698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR-EKLA  776 (894)
Q Consensus       698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg-~~La  776 (894)
                                                                              ....+|...|.+++|+|++ .+|+
T Consensus       208 --------------------------------------------------------~~~~~~~~~v~~~~~~~~~~~~l~  231 (416)
T 2pm9_A          208 --------------------------------------------------------SPNSGIKQQLSVVEWHPKNSTRVA  231 (416)
T ss_dssp             --------------------------------------------------------CCSSCCCCCEEEEEECSSCTTEEE
T ss_pred             --------------------------------------------------------ccccccCCceEEEEECCCCCCEEE
Confidence                                                                    0012356778999999997 6899


Q ss_pred             EecCCC---cEEEEEccCCc-eeec----cccCCCceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCC
Q psy10063        777 LALADK---VSERYRDRKNK-ATAG----FLLSCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP  847 (894)
Q Consensus       777 tgs~Dg---~I~iwd~~~~~-~~~~----~~~~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~  847 (894)
                      +++.|+   .|++||++... .+..    +...+..++|++ ++.++++++.++    .|+|||++.++++..+.+|...
T Consensus       232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg----~v~~wd~~~~~~~~~~~~~~~~  307 (416)
T 2pm9_A          232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN----TVLLWNPESAEQLSQFPARGNW  307 (416)
T ss_dssp             EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----EEEEECSSSCCEEEEEECSSSC
T ss_pred             EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----CEEEeeCCCCccceeecCCCCc
Confidence            999998   99999998863 3322    334455788999 899999999887    6999999999999999999999


Q ss_pred             eeEEEEeeCC-cEEEEecCCCcEEEEecCcccccc
Q psy10063        848 INSLAFHPDG-KSYASGGEDGFVRLHTFDQAYFDY  881 (894)
Q Consensus       848 V~~l~fSpdg-~~LaS~s~Dg~V~vWdl~~~~~~~  881 (894)
                      |.+|+|+|++ ++|++++.||.|+||++.......
T Consensus       308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~  342 (416)
T 2pm9_A          308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL  342 (416)
T ss_dssp             CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred             eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence            9999999999 899999999999999998776443

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=9.9e-32  Score=299.28  Aligned_cols=269  Identities=15%  Similarity=0.120  Sum_probs=209.6

Q ss_pred             ccceeeeeccCccEEEecCCC-------eEEE--------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy10063        379 SVDRLNSMSPAARKLATNAEP-------VVKM--------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWD  437 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~-------~~~~--------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd  437 (894)
                      .....++|||||++|+.++.+       .+.+              ...+|...|.+|+|+|++++| +++.||.|+|||
T Consensus        43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd  121 (357)
T 4g56_B           43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGAVELWE  121 (357)
T ss_dssp             SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTSCEEEC-
T ss_pred             CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCCEEEEee
Confidence            345667899999999987642       1221              334689999999999998655 567799999999


Q ss_pred             cCCCeEEE----EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE
Q psy10063        438 LRMGRELE----SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT  513 (894)
Q Consensus       438 ~~tg~~~~----~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~  513 (894)
                      +.+++.+.    .+.+|..                         .|.+|+|+|+|++|++|+.|+.|+|||+++++++..
T Consensus       122 ~~~~~~~~~~~~~~~~h~~-------------------------~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~  176 (357)
T 4g56_B          122 ILEKESLLVNKFAKYEHDD-------------------------IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS  176 (357)
T ss_dssp             -------CCCCEEECCCSS-------------------------CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             ccccceeEEEeeccCCCCC-------------------------CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            99887543    2335665                         789999999999999999999999999999999999


Q ss_pred             EeC-CCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc--cCCCCCeEEEEEecC-CCEE
Q psy10063        514 YTT-ERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPINSLAFHPD-GKSY  588 (894)
Q Consensus       514 ~~~-~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V~~l~~spd-g~~l  588 (894)
                      +.. ...|.+++|++++. +|++++.++.              |++||++.++++..+  ..|...|.+++|+|+ +.+|
T Consensus       177 ~~~h~~~v~~v~~s~~~~~~~~s~~~dg~--------------v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l  242 (357)
T 4g56_B          177 YNAHSSEVNCVAACPGKDTIFLSCGEDGR--------------ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF  242 (357)
T ss_dssp             ECCCSSCEEEEEECTTCSSCEEEEETTSC--------------EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred             EcCCCCCEEEEEEccCCCceeeeeccCCc--------------eEEEECCCCceeeeeeeccccccccchhhhhcccceE
Confidence            885 68899999999986 6788888887              899999988877655  356778999999997 4688


Q ss_pred             EEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhH
Q psy10063        589 ASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQI  668 (894)
Q Consensus       589 ~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~  668 (894)
                      ++|+.|+.|++||++.++.+                                                            
T Consensus       243 a~g~~d~~i~~wd~~~~~~~------------------------------------------------------------  262 (357)
T 4g56_B          243 ACGDETGNVSLVNIKNPDSA------------------------------------------------------------  262 (357)
T ss_dssp             EEEESSSCEEEEESSCGGGC------------------------------------------------------------
T ss_pred             EEeecccceeEEECCCCcEe------------------------------------------------------------
Confidence            99999999999998653211                                                            


Q ss_pred             HHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccccc
Q psy10063        669 EMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL  748 (894)
Q Consensus       669 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~  748 (894)
                                                                                                      
T Consensus       263 --------------------------------------------------------------------------------  262 (357)
T 4g56_B          263 --------------------------------------------------------------------------------  262 (357)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcceecCCCCceEEEeeCCCC-CEEEEecCCCcEEEEEccCCceeec--cccCCCceEeec-CCCeEEEEecCCCCc
Q psy10063        749 DGSDTPILAGPVDIGFKMPEPPKR-EKLALALADKVSERYRDRKNKATAG--FLLSCPDFLFDF-DTTREVTTTSTKVGK  824 (894)
Q Consensus       749 dg~~~~~~~~h~~~v~~la~spdg-~~Latgs~Dg~I~iwd~~~~~~~~~--~~~~~~~~~fS~-dg~~l~~as~d~~g~  824 (894)
                           ..+.+|...|.+|+|+|++ ++||+|+.|+.|+|||++.++.+..  +...+..++|+| |+.+|++++.|+   
T Consensus       263 -----~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg---  334 (357)
T 4g56_B          263 -----QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDH---  334 (357)
T ss_dssp             -----EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS---
T ss_pred             -----EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCC---
Confidence                 1234567778999999987 5799999999999999998877543  334556788998 899999999988   


Q ss_pred             eeEEEeecCCcc
Q psy10063        825 FDARFYHLIFEE  836 (894)
Q Consensus       825 ~~I~vwd~~tg~  836 (894)
                       .|+||++....
T Consensus       335 -~v~iW~~~~~~  345 (357)
T 4g56_B          335 -KVLHHHLPSEG  345 (357)
T ss_dssp             -CEEEEECC---
T ss_pred             -eEEEEECCCCC
Confidence             59999997543

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-32  Score=313.55  Aligned_cols=304  Identities=14%  Similarity=0.114  Sum_probs=228.8

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCE----EEEEeCC-----C
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATM----FITASHS-----Q  474 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~----la~~~~d-----~  474 (894)
                      .-++-...|.+|+|||||++||+++.|++|+  |...++   .+.+|.. .|++|+|+|+|..    +-.+...     .
T Consensus        10 ~~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~-~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~   83 (588)
T 2j04_A           10 DRKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSK-NLFHVKEFPLEFENKLDFELAQQNGLLNSQ   83 (588)
T ss_dssp             CSCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGG-GTEEEEEECCCCCCTTTTSCCCSSCSSTTS
T ss_pred             cHhHhhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCc-cEEEEEECCCCCcceEEEEeCCCceEeecC
Confidence            3445678999999999999999999999999  755554   4478988 9999999999821    0000000     0


Q ss_pred             CccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC-----CeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        475 AVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER-----PVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       475 ~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~-----~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                      ....|.+++|+|||++||+++.||.|+|||.+.  ++..+.++.     .|.+++|||||++|++|+.|+.         
T Consensus        84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGt---------  152 (588)
T 2j04_A           84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGE---------  152 (588)
T ss_dssp             CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSE---------
T ss_pred             CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCE---------
Confidence            015799999999999999999999999999544  666666433     4999999999999999999997         


Q ss_pred             cceeeEEEEeccccce-------EEEc----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc--------cC
Q psy10063        550 VGKFDARFYHLIFEEE-------FARI----KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI--------SE  610 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~-------~~~l----~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~--------~~  610 (894)
                           |++||+..+..       +..+    .+|..+|.+++|+|||  |++++.|+.|++|++..++..        .+
T Consensus       153 -----VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h  225 (588)
T 2j04_A          153 -----LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNAS  225 (588)
T ss_dssp             -----EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCC
T ss_pred             -----EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccc
Confidence                 88899887753       5665    6788999999999999  888999999999999876521        01


Q ss_pred             CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063        611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD  690 (894)
Q Consensus       611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~  690 (894)
                      ...+.+++|+  |                       ..+++++   ++.|++|+..                        
T Consensus       226 ~~~V~svaFs--g-----------------------~~LASa~---~~tIkLWd~~------------------------  253 (588)
T 2j04_A          226 RRKITDLKIV--D-----------------------YKVVLTC---PGYVHKIDLK------------------------  253 (588)
T ss_dssp             SSCCCCEEEE--T-----------------------TEEEEEC---SSEEEEEETT------------------------
T ss_pred             cCcEEEEEEE--C-----------------------CEEEEEe---CCeEEEEECC------------------------
Confidence            1223333332  1                       2233332   2445554411                        


Q ss_pred             CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc-ceecCCCCceEEEee-
Q psy10063        691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT-PILAGPVDIGFKMPE-  768 (894)
Q Consensus       691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~-~~~~~h~~~v~~la~-  768 (894)
                                                                                 +... ....+|.+.|..|+| 
T Consensus       254 -----------------------------------------------------------~~~~~~~~~gh~~~V~~va~~  274 (588)
T 2j04_A          254 -----------------------------------------------------------NYSISSLKTGSLENFHIIPLN  274 (588)
T ss_dssp             -----------------------------------------------------------TTEEEEEECSCCSCCCEEEET
T ss_pred             -----------------------------------------------------------CCeEEEEEcCCCceEEEEEee
Confidence                                                                       1111 122378899999999 


Q ss_pred             -CCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCC
Q psy10063        769 -PPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP  847 (894)
Q Consensus       769 -spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~  847 (894)
                       +|++..|++++.||. ++|...             .+.|++|+..++.+  ++    .|++|+...+. +..+++ ...
T Consensus       275 ~s~d~~~La~a~edG~-klw~~d-------------~~~~spd~~l~a~~--d~----~v~lW~~~g~~-l~~~~~-~~~  332 (588)
T 2j04_A          275 HEKESTILLMSNKTSY-KVLLED-------------ELHVTADNIIAPYL--EK----KFKKWSTIWNE-FNNYET-TLV  332 (588)
T ss_dssp             TCSSCEEEEECSSCEE-EEEESS-------------SEEEECCCSSHHHH--HH----HHHHTTTTTTS-SSSSCC-EEE
T ss_pred             eCCCCCEEEEEcCCCC-EEEeec-------------cEEECCCceEEEEc--CC----EEEEEECCCCc-eeeecc-ceE
Confidence             999999999999999 999876             36699999988874  44    58999986544 555555 778


Q ss_pred             eeEEEEeeCCcEEEEec
Q psy10063        848 INSLAFHPDGKSYASGG  864 (894)
Q Consensus       848 V~~l~fSpdg~~LaS~s  864 (894)
                      |.+|+|||||+.||+++
T Consensus       333 I~~va~SPdG~~lA~~~  349 (588)
T 2j04_A          333 IHGISLSPDGYSIAIVY  349 (588)
T ss_dssp             EEEEEECTTSSEEEEEE
T ss_pred             EEEEEECCCCCEEEEEE
Confidence            99999999999999886

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.5e-31  Score=294.44  Aligned_cols=278  Identities=8%  Similarity=-0.046  Sum_probs=232.3

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ..+|.+.|.+++|+|++++|++|+.||.|+|||+..++   .+..+.+|..                         .|.+
T Consensus         7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-------------------------~v~~   61 (342)
T 1yfq_A            7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-------------------------PLLC   61 (342)
T ss_dssp             SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS-------------------------CEEE
T ss_pred             ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCC-------------------------ceEE
Confidence            45899999999999999999999999999999998876   3444556766                         7889


Q ss_pred             EEEecCCC-EEEEEECCCCEEEEEc-CCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        482 MQFSKDAT-MFITASKDHTAKLFTT-HDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       482 l~~spdg~-~L~sgs~Dg~V~iwdl-~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      ++|+|+++ +|++|+.||.|++||+ ..++......  |...|.+++|+| +.+|++++.++.              |++
T Consensus        62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~--------------i~i  126 (342)
T 1yfq_A           62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGL--------------IEV  126 (342)
T ss_dssp             EEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSE--------------EEE
T ss_pred             EEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCe--------------EEE
Confidence            99999999 9999999999999999 8887755555  678999999999 999999999986              888


Q ss_pred             Eeccc---------cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC-CccccCCCceeeeEECcCCcEEE
Q psy10063        558 YHLIF---------EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN-GLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       558 wd~~~---------~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~-~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                      ||++.         ++++..+. |...|.+++|++++  |++++.||.|++||++. +....                  
T Consensus       127 wd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~------------------  185 (342)
T 1yfq_A          127 IDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG------------------  185 (342)
T ss_dssp             ECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCC------------------
T ss_pred             EcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccc------------------
Confidence            88887         77666666 88999999999887  99999999999999865 32100                  


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (342)
T 1yfq_A          186 --------------------------------------------------------------------------------  185 (342)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC-CCCEEEEecCCCcEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP-KREKLALALADKVSER  786 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp-dg~~Latgs~Dg~I~i  786 (894)
                                                                   ......|...+.+++|+| ++++|++++.||.|+|
T Consensus       186 ---------------------------------------------~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i  220 (342)
T 1yfq_A          186 ---------------------------------------------TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV  220 (342)
T ss_dssp             ---------------------------------------------EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred             ---------------------------------------------eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence                                                         001123455688999999 9999999999999999


Q ss_pred             EEccCC------ceeec---ccc---------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCC-CCC
Q psy10063        787 YRDRKN------KATAG---FLL---------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-FGP  847 (894)
Q Consensus       787 wd~~~~------~~~~~---~~~---------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH-~~~  847 (894)
                      |+++..      +.+..   +..         .+..++|++++++|++++.++    .|+|||+..++++..+.+| ...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~h~~~  296 (342)
T 1yfq_A          221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG----IISCWNLQTRKKIKNFAKFNEDS  296 (342)
T ss_dssp             EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS----CEEEEETTTTEEEEECCCCSSSE
T ss_pred             EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc----eEEEEcCccHhHhhhhhcccCCC
Confidence            998765      33222   222         455778999999999999887    5999999999999999998 999


Q ss_pred             eeEEEEeeCCcEEEEecCCCc-EEEEec
Q psy10063        848 INSLAFHPDGKSYASGGEDGF-VRLHTF  874 (894)
Q Consensus       848 V~~l~fSpdg~~LaS~s~Dg~-V~vWdl  874 (894)
                      |.+|+  +++++|++++.||. .+.|..
T Consensus       297 v~~~~--~~~~~l~s~s~Dg~~~~~~~~  322 (342)
T 1yfq_A          297 VVKIA--CSDNILCLATSDDTFKTNAAI  322 (342)
T ss_dssp             EEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred             ceEec--CCCCeEEEEecCCcccccccc
Confidence            99999  99999999999998 665554

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.1e-31  Score=295.40  Aligned_cols=285  Identities=15%  Similarity=0.147  Sum_probs=229.4

Q ss_pred             EEEEEecCCCCEEEEEEccC---CCEEEEecCCCcEEEEecCC-CeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        401 VKMQVTDQSAKITSLLWGNL---DQYIITGHAKGDICTWDLRM-GREL-ESISGHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spd---g~~L~sgs~Dg~I~iWd~~t-g~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      ....+.+|.+.|.+|+|+|+   |++|++|+.||.|+|||+.. ++.+ ..+.+|..                       
T Consensus        31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-----------------------   87 (368)
T 3mmy_A           31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG-----------------------   87 (368)
T ss_dssp             CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSS-----------------------
T ss_pred             eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccC-----------------------
Confidence            34467899999999999999   69999999999999999997 5554 77888887                       


Q ss_pred             ccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEE--cCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        476 VEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAAL--SPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~--spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                        .|.+++|+|++++|++++.||.|+|||++.++++....|...|.+++|  ++++.+|++++.++.             
T Consensus        88 --~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-------------  152 (368)
T 3mmy_A           88 --PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKT-------------  152 (368)
T ss_dssp             --CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSE-------------
T ss_pred             --CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCc-------------
Confidence              788999999999999999999999999999999998888999999999  999999999999996             


Q ss_pred             eEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063        554 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       554 ~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i  633 (894)
                       |++||++.++.+..+..|. .+.++.+.  +..+++++.++.+++|+++.....                         
T Consensus       153 -i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~-------------------------  203 (368)
T 3mmy_A          153 -LKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSE-------------------------  203 (368)
T ss_dssp             -EEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEE-------------------------
T ss_pred             -EEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccch-------------------------
Confidence             8999999999988887765 56666665  458888999999999998653210                         


Q ss_pred             EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063        634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN  713 (894)
Q Consensus       634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s  713 (894)
                        +...                                                                          
T Consensus       204 --~~~~--------------------------------------------------------------------------  207 (368)
T 3mmy_A          204 --FRRI--------------------------------------------------------------------------  207 (368)
T ss_dssp             --EEEC--------------------------------------------------------------------------
T ss_pred             --hhhc--------------------------------------------------------------------------
Confidence              0000                                                                          


Q ss_pred             CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC----EEEEecCCCcEEEEEc
Q psy10063        714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE----KLALALADKVSERYRD  789 (894)
Q Consensus       714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~----~Latgs~Dg~I~iwd~  789 (894)
                                                                ...+...+.++++.++..    .|++++.|+.|++|++
T Consensus       208 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~  245 (368)
T 3mmy_A          208 ------------------------------------------ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI  245 (368)
T ss_dssp             ------------------------------------------CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred             ------------------------------------------cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence                                                      000001112222222222    3999999999999999


Q ss_pred             cCCce------eecccc------------CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063        790 RKNKA------TAGFLL------------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL  851 (894)
Q Consensus       790 ~~~~~------~~~~~~------------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l  851 (894)
                      .....      +..+..            .+..++|++++++|++++.++    .|+|||+..++++..+.+|...|.+|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~v~~~  321 (368)
T 3mmy_A          246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG----RFSFWDKDARTKLKTSEQLDQPISAC  321 (368)
T ss_dssp             SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS----CEEEEETTTTEEEEECCCCSSCEEEE
T ss_pred             CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC----eEEEEECCCCcEEEEecCCCCCceEE
Confidence            87632      222222            466788999999999999887    59999999999999999999999999


Q ss_pred             EEeeCCcEEEEecCCCcEEEEec
Q psy10063        852 AFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       852 ~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      +|+|||++|++++.|+.++.|++
T Consensus       322 ~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          322 CFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             EECTTSSCEEEEECCCSTTCGGG
T ss_pred             EECCCCCeEEEEecccccccccc
Confidence            99999999999999986666554

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.2e-30  Score=288.73  Aligned_cols=161  Identities=21%  Similarity=0.324  Sum_probs=142.9

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..+.+|...|.+++|+|++.+|++|+.|+.|+|||+.++++++.+.+|..                         .|.++
T Consensus        70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-------------------------~v~~v  124 (343)
T 2xzm_R           70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS-------------------------EVYSV  124 (343)
T ss_dssp             EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS-------------------------CEEEE
T ss_pred             chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC-------------------------cEEEE
Confidence            35789999999999999999999999999999999999999999999988                         78889


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEE---eCCCCeeEEEEcCCC----------CEEEEEECCCCeEEEeccCc
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTY---TTERPVNSAALSPIL----------PHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~---~~~~~v~~l~~spdg----------~~l~~~~~~~~~~v~~~~~~  549 (894)
                      +|+|++++|++++.|+.|+|||+.........   .+...|.+++|+|++          .+|++++.++.         
T Consensus       125 ~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~---------  195 (343)
T 2xzm_R          125 AFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR---------  195 (343)
T ss_dssp             EECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE---------
T ss_pred             EECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE---------
Confidence            99999999999999999999999844333322   245789999999987          78999999987         


Q ss_pred             cceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                           |++||. .++.+..+.+|...|.+++|+|+|++|++|+.||.|+|||+.
T Consensus       196 -----i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~  243 (343)
T 2xzm_R          196 -----LKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL  243 (343)
T ss_dssp             -----EEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred             -----EEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence                 888884 466777888999999999999999999999999999999984

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.2e-30  Score=284.09  Aligned_cols=245  Identities=14%  Similarity=0.164  Sum_probs=212.5

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|.+++|+|++++|++|+.||.|+|||+..++++..+.. ...|.+++|+|++++|++++.++.              |+
T Consensus        25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~--------------i~   90 (312)
T 4ery_A           25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKT--------------LK   90 (312)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--------------EE
T ss_pred             cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCE--------------EE
Confidence            789999999999999999999999999999999888874 578999999999999999999986              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +||++.++++..+.+|...|.+++|+|++.+|++|+.||.|++||++.++.+                            
T Consensus        91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~----------------------------  142 (312)
T 4ery_A           91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL----------------------------  142 (312)
T ss_dssp             EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE----------------------------
T ss_pred             EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE----------------------------
Confidence            9999999999999999999999999999999999999999999998653210                            


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (312)
T 4ery_A          143 --------------------------------------------------------------------------------  142 (312)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA  796 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~  796 (894)
                                                           ..+..|...|.+++|+|++.+|++++.|+.|++||++.++.+.
T Consensus       143 -------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~  185 (312)
T 4ery_A          143 -------------------------------------KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK  185 (312)
T ss_dssp             -------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred             -------------------------------------EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee
Confidence                                                 0122356678899999999999999999999999999888766


Q ss_pred             ccccC----CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE--EEe-eCCcEEEEecCCCcE
Q psy10063        797 GFLLS----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL--AFH-PDGKSYASGGEDGFV  869 (894)
Q Consensus       797 ~~~~~----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l--~fS-pdg~~LaS~s~Dg~V  869 (894)
                      .+...    +..++|+++++++++++.++    .|+|||+..++++..+.+|...+.++  .|+ +++++|++|+.||.|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i  261 (312)
T 4ery_A          186 TLIDDDNPPVSFVKFSPNGKYILAATLDN----TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV  261 (312)
T ss_dssp             EECCSSCCCEEEEEECTTSSEEEEEETTT----EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCE
T ss_pred             EEeccCCCceEEEEECCCCCEEEEEcCCC----eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEE
Confidence            54432    34578999999999999887    69999999999999999998765433  344 678999999999999


Q ss_pred             EEEecCcccccccccc
Q psy10063        870 RLHTFDQAYFDYTFDI  885 (894)
Q Consensus       870 ~vWdl~~~~~~~~~~~  885 (894)
                      +||+++.++++..+..
T Consensus       262 ~vwd~~~~~~~~~~~~  277 (312)
T 4ery_A          262 YIWNLQTKEIVQKLQG  277 (312)
T ss_dssp             EEEETTTCCEEEEECC
T ss_pred             EEEECCCchhhhhhhc
Confidence            9999999988777653

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.4e-31  Score=296.64  Aligned_cols=314  Identities=15%  Similarity=0.090  Sum_probs=220.4

Q ss_pred             CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC-EEEEEECCCCEEEEEc----
Q psy10063        431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT-MFITASKDHTAKLFTT----  505 (894)
Q Consensus       431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl----  505 (894)
                      ..+.+|++...........|.+                         .|.+++|+|+|+ +|++|+.||.|+|||+    
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~-------------------------~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~   79 (425)
T 1r5m_A           25 SIDSSDDLDGFVKILKEIVKLD-------------------------NIVSSTWNPLDESILAYGEKNSVARLARIVETD   79 (425)
T ss_dssp             ---------CCCEECEEEEECS-------------------------CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC-
T ss_pred             cccccccchhhhhheeeeeccC-------------------------ceEEEEECCCCCcEEEEecCCceEEEEEEeccc
Confidence            3456788765554444444545                         788899999999 9999999999999999    


Q ss_pred             CCCc------EEEEEeC-----------CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        506 HDRQ------LLKTYTT-----------ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       506 ~~~~------~~~~~~~-----------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      ..++      ....+.+           ...|.+++|+|++++|++++.++.              |++|| ..++.+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~i~~-~~~~~~~~  144 (425)
T 1r5m_A           80 QEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGE--------------LRLWN-KTGALLNV  144 (425)
T ss_dssp             -----CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSC--------------EEEEE-TTSCEEEE
T ss_pred             CCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCe--------------EEEEe-CCCCeeee
Confidence            8888      4555554           348999999999999999999987              88888 66788888


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCe
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGG  648 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~  648 (894)
                      +.+|...|.+++|+|++++|++++.||.|++||+..++.+....      ....         ....+....        
T Consensus       145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~---------~~~~~~~~~--------  201 (425)
T 1r5m_A          145 LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE------LKET---------GGSSINAEN--------  201 (425)
T ss_dssp             ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC------CC----------------------------
T ss_pred             ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee------cccc---------Cccceeecc--------
Confidence            99999999999999999999999999999999998765331100      0000         000000000        


Q ss_pred             eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063        649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  728 (894)
Q Consensus       649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~  728 (894)
                       ..+                           .+.        ....               +.+.+++. ++++..+   
T Consensus       202 -~~~---------------------------~~~--------~~~~---------------~~~~~~~~-~~~~~~~---  226 (425)
T 1r5m_A          202 -HSG---------------------------DGS--------LGVD---------------VEWVDDDK-FVIPGPK---  226 (425)
T ss_dssp             --------------------------------CC--------CBSC---------------CEEEETTE-EEEECGG---
T ss_pred             -ccC---------------------------Ccc--------eeeE---------------EEEcCCCE-EEEEcCC---
Confidence             000                           000        0000               11111111 1111111   


Q ss_pred             cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc---ccCCCce
Q psy10063        729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF---LLSCPDF  805 (894)
Q Consensus       729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---~~~~~~~  805 (894)
                          ..+.+|+...       +.....+.+|...|.+++|+|++++|++++.|+.|++||+...+.+..+   ...+..+
T Consensus       227 ----g~i~~~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~  295 (425)
T 1r5m_A          227 ----GAIFVYQITE-------KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSA  295 (425)
T ss_dssp             ----GCEEEEETTC-------SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEE
T ss_pred             ----CeEEEEEcCC-------CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEE
Confidence                1233443322       2233456678899999999999999999999999999999887765443   3445678


Q ss_pred             EeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        806 LFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       806 ~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      +|++++ ++++++.++    .|+|||+..++++..+.+|...|.+++|+|++++|++++.||.|+||++..+.
T Consensus       296 ~~~~~~-~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~  363 (425)
T 1r5m_A          296 SWVGDD-KVISCSMDG----SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN  363 (425)
T ss_dssp             EEETTT-EEEEEETTS----EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred             EECCCC-EEEEEeCCC----cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence            899999 888888877    69999999999999999999999999999999999999999999999998877

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.9e-30  Score=286.02  Aligned_cols=270  Identities=16%  Similarity=0.151  Sum_probs=222.7

Q ss_pred             CCCccceeeeeccCccEEEecCCC-eEEE----------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC---
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEP-VVKM----------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG---  441 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~-~~~~----------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg---  441 (894)
                      .+......++|++||++|+.++.+ .+++          .+..|...|.+++|+|+|.+|++|+.|+.|+||++...   
T Consensus        62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~  141 (354)
T 2pbi_B           62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE  141 (354)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred             CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence            344455677899999999887654 2322          45678899999999999999999999999999998643   


Q ss_pred             ---eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-C
Q psy10063        442 ---RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-E  517 (894)
Q Consensus       442 ---~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~  517 (894)
                         .....+.+|..                         .|.+++|++++.+|++++.|+.|+|||+++++++..+.. .
T Consensus       142 ~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~  196 (354)
T 2pbi_B          142 NMAAKKKSVAMHTN-------------------------YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHG  196 (354)
T ss_dssp             CSGGGCEEEEECSS-------------------------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred             cccccceeeeccCC-------------------------cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCC
Confidence               23455556665                         788999999999999999999999999999999998885 5


Q ss_pred             CCeeEEEEcC--CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        518 RPVNSAALSP--ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       518 ~~v~~l~~sp--dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      ..|.+++|+|  +|.+|++++.|+.              |++||++.++++..+.+|...|.+++|+|++.+|++|+.|+
T Consensus       197 ~~v~~~~~~~~~~g~~l~sgs~Dg~--------------v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~  262 (354)
T 2pbi_B          197 ADVLCLDLAPSETGNTFVSGGCDKK--------------AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA  262 (354)
T ss_dssp             SCEEEEEECCCSSCCEEEEEETTSC--------------EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCeEEEEEEeCCCCCEEEEEeCCCe--------------EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence            7899999987  5789999999997              89999999999999999999999999999999999999999


Q ss_pred             cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063        596 FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM  675 (894)
Q Consensus       596 ~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~  675 (894)
                      .|++||++.++.+                         ..+.                                      
T Consensus       263 ~v~lwd~~~~~~~-------------------------~~~~--------------------------------------  279 (354)
T 2pbi_B          263 TCRLYDLRADREV-------------------------AIYS--------------------------------------  279 (354)
T ss_dssp             CEEEEETTTTEEE-------------------------EEEC--------------------------------------
T ss_pred             eEEEEECCCCcEE-------------------------EEEc--------------------------------------
Confidence            9999998653210                         0000                                      


Q ss_pred             cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcce
Q psy10063        676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPI  755 (894)
Q Consensus       676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~  755 (894)
                                                                                                      
T Consensus       280 --------------------------------------------------------------------------------  279 (354)
T 2pbi_B          280 --------------------------------------------------------------------------------  279 (354)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec---cccCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063        756 LAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG---FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYH  831 (894)
Q Consensus       756 ~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~---~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd  831 (894)
                      ...+...+.+++|+|++.+|++|+.|+.|+|||+..++.+..   +...+..++|+|||++|++++.|+    .|+||+
T Consensus       280 ~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~----~v~vW~  354 (354)
T 2pbi_B          280 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH----TLRVWA  354 (354)
T ss_dssp             CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTS----EEEEEC
T ss_pred             CCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCC----CEEecC
Confidence            000122467899999999999999999999999988876543   444566788999999999999998    699996

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.7e-30  Score=297.42  Aligned_cols=279  Identities=17%  Similarity=0.170  Sum_probs=227.7

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ..+|...|.|++|  ++++|++|+.||.|+|||+.+++.+..+.+|..                         .|.+++|
T Consensus       129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-------------------------~v~~l~~  181 (435)
T 1p22_A          129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG-------------------------SVLCLQY  181 (435)
T ss_dssp             CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSS-------------------------CEEEEEC
T ss_pred             ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC-------------------------cEEEEEE
Confidence            3467788999887  799999999999999999999999999999988                         6778877


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                        ++++|++|+.||.|+|||+++++++..+.. ...|.+++|+  +.+|++++.++.              |++||+..+
T Consensus       182 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~--------------i~vwd~~~~  243 (435)
T 1p22_A          182 --DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRS--------------IAVWDMASP  243 (435)
T ss_dssp             --CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSC--------------EEEEECSSS
T ss_pred             --CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCc--------------EEEEeCCCC
Confidence              788999999999999999999999998875 5789999997  459999999997              888888877


Q ss_pred             ceE---EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        564 EEF---ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       564 ~~~---~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      +.+   ..+.+|...|.+++|  ++++|++|+.||.|++||++.++.+                                
T Consensus       244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~--------------------------------  289 (435)
T 1p22_A          244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFV--------------------------------  289 (435)
T ss_dssp             SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE--------------------------------
T ss_pred             CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEE--------------------------------
Confidence            655   667899999999999  7889999999999999998654211                                


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       290 --------------------------------------------------------------------------------  289 (435)
T 1p22_A          290 --------------------------------------------------------------------------------  289 (435)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL  800 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~  800 (894)
                                                       ..+.+|...|.++++  ++.+|++|+.|+.|++||++.++.+..+..
T Consensus       290 ---------------------------------~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~  334 (435)
T 1p22_A          290 ---------------------------------RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG  334 (435)
T ss_dssp             ---------------------------------EEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             ---------------------------------EEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC
Confidence                                             012235556777777  478999999999999999998887665543


Q ss_pred             CCC-ceEeecCCCeEEEEecCCCCceeEEEeecCCcc---------eeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        801 SCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE---------EFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       801 ~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~---------~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      ... ..++..++.++++++.++    .|+|||+..++         ++..+.+|.+.|.+|+|  ++++|++++.||.|+
T Consensus       335 h~~~v~~~~~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~  408 (435)
T 1p22_A          335 HEELVRCIRFDNKRIVSGAYDG----KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL  408 (435)
T ss_dssp             CSSCEEEEECCSSEEEEEETTS----CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEE
T ss_pred             CcCcEEEEEecCCEEEEEeCCC----cEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEE
Confidence            322 233555999999999887    59999998776         78889999999999999  789999999999999


Q ss_pred             EEecCcccccccc
Q psy10063        871 LHTFDQAYFDYTF  883 (894)
Q Consensus       871 vWdl~~~~~~~~~  883 (894)
                      ||++.........
T Consensus       409 iwd~~~~~~~~~~  421 (435)
T 1p22_A          409 IWDFLNDPAAQAE  421 (435)
T ss_dssp             EEC----------
T ss_pred             EEECCCCCCcccC
Confidence            9999877655443

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-31  Score=294.02  Aligned_cols=258  Identities=14%  Similarity=0.211  Sum_probs=211.4

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      +...+.+|.+.|.+++|+|++++|++|+.||.|+|||+.  .++.+..+.+|..                         .
T Consensus         3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-------------------------~   57 (379)
T 3jrp_A            3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG-------------------------P   57 (379)
T ss_dssp             --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-------------------------C
T ss_pred             ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCC-------------------------c
Confidence            345678999999999999999999999999999999998  6677888899987                         6


Q ss_pred             eEEEEEecC--CCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCccc
Q psy10063        479 INDMQFSKD--ATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       479 V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      |.+|+|+++  +.+|++|+.||.|+|||++.++  .+..+. +...|.+++|+|+  +.+|++++.++.           
T Consensus        58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~-----------  126 (379)
T 3jrp_A           58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK-----------  126 (379)
T ss_dssp             EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE-----------
T ss_pred             EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc-----------
Confidence            888888766  8999999999999999999987  555555 5689999999999  999999999997           


Q ss_pred             eeeEEEEecccc--ceEEEccCCCCCeEEEEEec-------------CCCEEEEEeCCCcEEEEECCCCccccCCCceee
Q psy10063        552 KFDARFYHLIFE--EEFARIKGHFGPINSLAFHP-------------DGKSYASGGEDGFLISNTLSNGLDISEGSFTSS  616 (894)
Q Consensus       552 ~~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~sp-------------dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~  616 (894)
                         |++||+..+  .....+.+|...|.+++|+|             ++.+|++++.||.|++||++.+....       
T Consensus       127 ---i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-------  196 (379)
T 3jrp_A          127 ---VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-------  196 (379)
T ss_dssp             ---EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEE-------
T ss_pred             ---EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce-------
Confidence               888888776  34456678999999999999             69999999999999999985432100       


Q ss_pred             eEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063        617 STQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE  696 (894)
Q Consensus       617 ~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  696 (894)
                                        .                                                             
T Consensus       197 ------------------~-------------------------------------------------------------  197 (379)
T 3jrp_A          197 ------------------V-------------------------------------------------------------  197 (379)
T ss_dssp             ------------------E-------------------------------------------------------------
T ss_pred             ------------------e-------------------------------------------------------------
Confidence                              0                                                             


Q ss_pred             eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---CC
Q psy10063        697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---RE  773 (894)
Q Consensus       697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---g~  773 (894)
                                                                             ....+.+|...|.+++|+|+   +.
T Consensus       198 -------------------------------------------------------~~~~~~~h~~~v~~~~~sp~~~~~~  222 (379)
T 3jrp_A          198 -------------------------------------------------------LESTLEGHSDWVRDVAWSPTVLLRS  222 (379)
T ss_dssp             -------------------------------------------------------EEEEECCCSSCEEEEEECCCCSSSE
T ss_pred             -------------------------------------------------------eEEEEecccCcEeEEEECCCCCCCC
Confidence                                                                   00123457788999999999   89


Q ss_pred             EEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEE
Q psy10063        774 KLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF  853 (894)
Q Consensus       774 ~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~f  853 (894)
                      +|++++.||.|+|||+.......                                      ...+.....|...|.+++|
T Consensus       223 ~l~s~~~dg~i~iwd~~~~~~~~--------------------------------------~~~~~~~~~~~~~v~~~~~  264 (379)
T 3jrp_A          223 YLASVSQDRTCIIWTQDNEQGPW--------------------------------------KKTLLKEEKFPDVLWRASW  264 (379)
T ss_dssp             EEEEEETTSCEEEEEESSTTSCC--------------------------------------EEEESSSSCCSSCEEEEEE
T ss_pred             eEEEEeCCCEEEEEeCCCCCccc--------------------------------------eeeeeccccCCCcEEEEEE
Confidence            99999999999999876532100                                      0111223468889999999


Q ss_pred             eeCCcEEEEecCCCcEEEEecCc
Q psy10063        854 HPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       854 Spdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      +|+|++|++++.||.|+||++..
T Consensus       265 s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          265 SLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             CSSSCCEEEEESSSSEEEEEEEE
T ss_pred             cCCCCEEEEecCCCcEEEEeCCC
Confidence            99999999999999999999974

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.98  E-value=7.5e-31  Score=294.78  Aligned_cols=279  Identities=14%  Similarity=0.153  Sum_probs=222.9

Q ss_pred             CCccceeeeeccCccEEEecCCC-eEE----------EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-VVK----------MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---  442 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-~~~----------~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---  442 (894)
                      +......++|+|+|++|+.++.+ .++          ..+.+|...|.+++|+|+|++|++|+.|+.|+|||+....   
T Consensus        65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~  144 (380)
T 3iz6_a           65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD  144 (380)
T ss_dssp             CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC
T ss_pred             cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc
Confidence            34455667899999999887654 333          3677899999999999999999999999999999987532   


Q ss_pred             ----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-CCEEEEEECCCCEEEEEcCCCcEEEEEe--
Q psy10063        443 ----ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-ATMFITASKDHTAKLFTTHDRQLLKTYT--  515 (894)
Q Consensus       443 ----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-g~~L~sgs~Dg~V~iwdl~~~~~~~~~~--  515 (894)
                          ..+.+.+|.+                         .|.+++|.|+ +.+|++|+.|+.|+|||+++++++..+.  
T Consensus       145 ~~~~~~~~~~gh~~-------------------------~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~  199 (380)
T 3iz6_a          145 GNMPVSRVLTGHKG-------------------------YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE  199 (380)
T ss_dssp             CSSTTCCBCCCCSS-------------------------CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred             CCccceeeccCCCc-------------------------ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence                2345667766                         6777777775 4579999999999999999999998873  


Q ss_pred             ----CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEecc-ccceEEEccCCCCCeEEEEEecCCCEEE
Q psy10063        516 ----TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGHFGPINSLAFHPDGKSYA  589 (894)
Q Consensus       516 ----~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h~~~V~~l~~spdg~~l~  589 (894)
                          |...|.+++|++ ++.+|++++.|+.              |++||++ .++.+..+.+|.+.|.+|+|+|++++|+
T Consensus       200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~--------------v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~  265 (380)
T 3iz6_a          200 FPSGHTADVLSLSINSLNANMFISGSCDTT--------------VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG  265 (380)
T ss_dssp             SSSSCCSCEEEEEECSSSCCEEEEEETTSC--------------EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred             cCCCCccCeEEEEeecCCCCEEEEEECCCe--------------EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence                457899999977 8899999999997              8999987 4577888999999999999999999999


Q ss_pred             EEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHH
Q psy10063        590 SGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIE  669 (894)
Q Consensus       590 sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~  669 (894)
                      +|+.||.|+|||++.++.+.                         .+....                             
T Consensus       266 s~s~D~~i~lwd~~~~~~~~-------------------------~~~~~~-----------------------------  291 (380)
T 3iz6_a          266 TGSDDGTCRLFDMRTGHQLQ-------------------------VYNREP-----------------------------  291 (380)
T ss_dssp             EECSSSCEEEEETTTTEEEE-------------------------EECCCC-----------------------------
T ss_pred             EEcCCCeEEEEECCCCcEEE-------------------------Eecccc-----------------------------
Confidence            99999999999997653210                         000000                             


Q ss_pred             HhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccC
Q psy10063        670 MARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLD  749 (894)
Q Consensus       670 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~d  749 (894)
                                                                                                      
T Consensus       292 --------------------------------------------------------------------------------  291 (380)
T 3iz6_a          292 --------------------------------------------------------------------------------  291 (380)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-------cccCCCceEeecCCCeEEEEecCCC
Q psy10063        750 GSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-------FLLSCPDFLFDFDTTREVTTTSTKV  822 (894)
Q Consensus       750 g~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-------~~~~~~~~~fS~dg~~l~~as~d~~  822 (894)
                          .....+...|.+++|+|+|++|++|+.||.|++||....+.+..       +...+..++|++||.+|++++.|+ 
T Consensus       292 ----~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-  366 (380)
T 3iz6_a          292 ----DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-  366 (380)
T ss_dssp             ----SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-
T ss_pred             ----cccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-
Confidence                00011223467899999999999999999999999987776432       334566889999999999999998 


Q ss_pred             CceeEEEeecCCcc
Q psy10063        823 GKFDARFYHLIFEE  836 (894)
Q Consensus       823 g~~~I~vwd~~tg~  836 (894)
                         .|+||++..++
T Consensus       367 ---~i~iW~~~~~~  377 (380)
T 3iz6_a          367 ---NLKIWAFSGHR  377 (380)
T ss_dssp             ---CEEEEECCSSS
T ss_pred             ---CEEEEecCCCc
Confidence               59999987654

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.98  E-value=6.5e-30  Score=281.28  Aligned_cols=184  Identities=16%  Similarity=0.226  Sum_probs=145.9

Q ss_pred             eeeeeccCccEEEecCCC---eEEEEE-ec-CCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-------CeEEEEecC
Q psy10063        382 RLNSMSPAARKLATNAEP---VVKMQV-TD-QSAKITSLLWGNLDQYIITGHAKGDICTWDLRM-------GRELESISG  449 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~---~~~~~l-~~-H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-------g~~~~~l~~  449 (894)
                      .+...+.||.+.+.....   .+...+ .+ |.+.|.+|+|+|++++|++|+.|+.|+|||+..       .+++..+.+
T Consensus        26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~  105 (330)
T 2hes_X           26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG  105 (330)
T ss_dssp             EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred             EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence            344445555544433221   233334 34 999999999999999999999999999999853       456777888


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCC----CcEEEEEe-CCCCeeEEE
Q psy10063        450 HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHD----RQLLKTYT-TERPVNSAA  524 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~----~~~~~~~~-~~~~v~~l~  524 (894)
                      |..                         .|.+|+|+|+|++|++|+.|+.|+|||++.    .+++..+. |...|.+++
T Consensus       106 h~~-------------------------~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~  160 (330)
T 2hes_X          106 HEN-------------------------EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI  160 (330)
T ss_dssp             ----------------------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred             CCC-------------------------cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence            887                         788999999999999999999999999953    24566666 458899999


Q ss_pred             EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc--ceEEEccCCCCCeEEEEEecC--CCEEEEEeCCCcEEEE
Q psy10063        525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHFGPINSLAFHPD--GKSYASGGEDGFLISN  600 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~spd--g~~l~sgs~Dg~I~vw  600 (894)
                      |+|++.+|++++.|+.              |++||+..+  +++..+.+|.+.|.+++|+|+  +.+|++|+.|+.|++|
T Consensus       161 ~~p~~~~l~s~s~D~~--------------i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw  226 (330)
T 2hes_X          161 WHPSEALLASSSYDDT--------------VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW  226 (330)
T ss_dssp             ECSSSSEEEEEETTSC--------------EEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred             ECCCCCEEEEEcCCCe--------------EEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence            9999999999999997              888888765  678889999999999999998  6789999999999999


Q ss_pred             ECCC
Q psy10063        601 TLSN  604 (894)
Q Consensus       601 dl~~  604 (894)
                      ++..
T Consensus       227 ~~~~  230 (330)
T 2hes_X          227 KYMG  230 (330)
T ss_dssp             EEEE
T ss_pred             EecC
Confidence            9743

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.97  E-value=4.5e-30  Score=291.44  Aligned_cols=207  Identities=17%  Similarity=0.165  Sum_probs=177.4

Q ss_pred             eeeeccCccEEEecCCC-eEEEE----------EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC
Q psy10063        383 LNSMSPAARKLATNAEP-VVKMQ----------VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA  451 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~~-~~~~~----------l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~  451 (894)
                      .++|+++|++|+.+..+ .+++.          +..| ..+....|++++++|++|+.||.|+|||+..++++..+.+|.
T Consensus        61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~  139 (420)
T 3vl1_A           61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV  139 (420)
T ss_dssp             TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS
T ss_pred             ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc
Confidence            46899999999877654 33331          1123 445566889999999999999999999999999999889999


Q ss_pred             CCCeeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE
Q psy10063        452 KEPINDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT  513 (894)
Q Consensus       452 ~~~V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~  513 (894)
                      . .|.+++|+|++++|++++.|+.+                  ..|.+++|+|++++|++++.||.|+|||++.++++..
T Consensus       140 ~-~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~  218 (420)
T 3vl1_A          140 S-EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT  218 (420)
T ss_dssp             S-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             C-ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence            8 99999999999999999999877                  5899999999999999999999999999999999988


Q ss_pred             EeC----CCCeeE---------------------EEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        514 YTT----ERPVNS---------------------AALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       514 ~~~----~~~v~~---------------------l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      +..    ...+.+                     ++|+|+|++|++++.++.              |++||++.++.+..
T Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~i~d~~~~~~~~~  284 (420)
T 3vl1_A          219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV--------------ITVHNVFSKEQTIQ  284 (420)
T ss_dssp             ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC--------------EEEEETTTCCEEEE
T ss_pred             eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe--------------EEEEECCCCceeEE
Confidence            863    234444                     455789999999999997              89999998887776


Q ss_pred             cc-CCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCC
Q psy10063        569 IK-GHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       569 l~-~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +. +|...|.+++|+|+++ +|++|+.||.|++||++.+
T Consensus       285 ~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~  323 (420)
T 3vl1_A          285 LPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP  323 (420)
T ss_dssp             ECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred             cccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence            64 5889999999999999 9999999999999999754

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.9e-29  Score=289.98  Aligned_cols=302  Identities=12%  Similarity=0.068  Sum_probs=227.4

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCe---EEEEecCCCCCCeeEEEEc---CCCCEEEEEeC-----------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGR---ELESISGHAKEPINDMQFS---KDATMFITASH-----------  472 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~s---pdg~~la~~~~-----------  472 (894)
                      .+|.+++|++||++|+++ .++.|+|||+.+|+   .+..+..+.. .+..+.+.   .++..+.....           
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFD-KIQESRNTTAKEQQGQSSENENENKKLKSNKGD   82 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccc-cccccccccchhhccccccccccccccccCcCc
Confidence            578999999999977766 47799999999998   7777765543 22222221   11111111110           


Q ss_pred             ----------------CCCccceEEEEEecCCCEE-EEEECCCCEEEEEcC--CCcEEEEEe---CCCCeeEEEEcCCCC
Q psy10063        473 ----------------SQAVEPINDMQFSKDATMF-ITASKDHTAKLFTTH--DRQLLKTYT---TERPVNSAALSPILP  530 (894)
Q Consensus       473 ----------------d~~i~~V~~l~~spdg~~L-~sgs~Dg~V~iwdl~--~~~~~~~~~---~~~~v~~l~~spdg~  530 (894)
                                      .+....|.+++|+|++++| ++|+.||.|+|||+.  .++++..+.   +...|.+++|+|+|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~  162 (450)
T 2vdu_B           83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT  162 (450)
T ss_dssp             -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred             cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence                            0111369999999999996 889999999999999  888888774   468899999999999


Q ss_pred             EEEEEECCCCeEEEeccCccceeeEEEEeccccceEE----EccCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECC
Q psy10063        531 HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA----RIKGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       531 ~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~----~l~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~  603 (894)
                      +|++++.++.              |++|++..++...    .+.+|...|.+|+|+|+   +++|++|+.|+.|++||+.
T Consensus       163 ~l~~~~~~g~--------------v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~  228 (450)
T 2vdu_B          163 TVIIADKFGD--------------VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP  228 (450)
T ss_dssp             EEEEEETTSE--------------EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred             EEEEEeCCCc--------------EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence            9999999886              7788877766443    77889999999999999   9999999999999999986


Q ss_pred             CCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCe
Q psy10063        604 NGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTR  683 (894)
Q Consensus       604 ~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~  683 (894)
                      .++.+.                                                                          
T Consensus       229 ~~~~~~--------------------------------------------------------------------------  234 (450)
T 2vdu_B          229 QCFIVD--------------------------------------------------------------------------  234 (450)
T ss_dssp             CTTCEE--------------------------------------------------------------------------
T ss_pred             CCceee--------------------------------------------------------------------------
Confidence            432100                                                                          


Q ss_pred             EEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCce
Q psy10063        684 LHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIG  763 (894)
Q Consensus       684 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v  763 (894)
                                                                                            .++.+|...|
T Consensus       235 ----------------------------------------------------------------------~~~~~h~~~v  244 (450)
T 2vdu_B          235 ----------------------------------------------------------------------KWLFGHKHFV  244 (450)
T ss_dssp             ----------------------------------------------------------------------EECCCCSSCE
T ss_pred             ----------------------------------------------------------------------eeecCCCCce
Confidence                                                                                  0123577789


Q ss_pred             EEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----------------------------cCCCceEeecCCCeEE
Q psy10063        764 FKMPEPPKREKLALALADKVSERYRDRKNKATAGFL----------------------------LSCPDFLFDFDTTREV  815 (894)
Q Consensus       764 ~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~----------------------------~~~~~~~fS~dg~~l~  815 (894)
                      .+++|+ ++++|++++.|+.|+|||+..++.+..+.                            ..+..++|++++++++
T Consensus       245 ~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~  323 (450)
T 2vdu_B          245 SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA  323 (450)
T ss_dssp             EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE
T ss_pred             EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE
Confidence            999999 99999999999999999999888755443                            1234678999999999


Q ss_pred             EEe-cCCCCceeEEEeec--CCc---ceeeeccCCCCCeeEEEEeeCCcEEEEecC------CCcEEEEecCcc
Q psy10063        816 TTT-STKVGKFDARFYHL--IFE---EEFARIKGHFGPINSLAFHPDGKSYASGGE------DGFVRLHTFDQA  877 (894)
Q Consensus       816 ~as-~d~~g~~~I~vwd~--~tg---~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~------Dg~V~vWdl~~~  877 (894)
                      +++ .++    .|+||++  ..+   +++..+.+| +.|.+|+|+|++.+++.++.      +..|+||.+...
T Consensus       324 ~~~~~d~----~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          324 FFVEATK----CIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             EEETTCS----EEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             EEECCCC----eEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence            998 554    6999999  666   677788888 88999999996554444443      556899987543

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.97  E-value=7e-29  Score=301.46  Aligned_cols=164  Identities=26%  Similarity=0.431  Sum_probs=148.2

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..+.+|.+.|.+|+|+|+|++|++|+.||.|+|||+.++++++.+.+|..                         .|.++
T Consensus       424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-------------------------~v~~~  478 (694)
T 3dm0_A          424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK-------------------------DVLSV  478 (694)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------------------------CEEEE
T ss_pred             ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC-------------------------CEEEE
Confidence            35779999999999999999999999999999999999999999999988                         78888


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe----CCCCeeEEEEcCCC--CEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT----TERPVNSAALSPIL--PHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~----~~~~v~~l~~spdg--~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +|+|++++|++|+.|+.|+|||+..........    |...|.+++|+|++  ..|++++.++.              |+
T Consensus       479 ~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~--------------v~  544 (694)
T 3dm0_A          479 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT--------------VK  544 (694)
T ss_dssp             EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC--------------EE
T ss_pred             EEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe--------------EE
Confidence            899999999999999999999987654443332    45679999999987  57999999997              89


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +||+..++++..+.+|.+.|.+|+|+|+|++|++|+.||.|+|||+..+
T Consensus       545 vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~  593 (694)
T 3dm0_A          545 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG  593 (694)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred             EEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence            9999999999999999999999999999999999999999999998654

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=9.4e-30  Score=287.82  Aligned_cols=281  Identities=11%  Similarity=0.095  Sum_probs=224.1

Q ss_pred             CCEEEEEEccCCCEE-EEecCCCcEEEEecCCCe----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        410 AKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGR----ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       410 ~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      .....++++|+...+ ++++.||.|+||++....    .+..+.+|.+                         .|.+++|
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~~~~   89 (402)
T 2aq5_A           35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTA-------------------------PVLDIAW   89 (402)
T ss_dssp             CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSS-------------------------CEEEEEE
T ss_pred             cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCC-------------------------CEEEEEe
Confidence            344568888877644 457889999999996543    2445667776                         7888999


Q ss_pred             ec-CCCEEEEEECCCCEEEEEcCCC-------cEEEEEe-CCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceee
Q psy10063        485 SK-DATMFITASKDHTAKLFTTHDR-------QLLKTYT-TERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       485 sp-dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~-~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      +| ++.+|++|+.||.|+|||+..+       +++..+. |...|.+++|+|++ .+|++++.++.              
T Consensus        90 ~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~--------------  155 (402)
T 2aq5_A           90 CPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV--------------  155 (402)
T ss_dssp             CTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC--------------
T ss_pred             CCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE--------------
Confidence            99 8999999999999999999987       5566666 56899999999998 69999999987              


Q ss_pred             EEEEeccccceEEEc--cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCe
Q psy10063        555 ARFYHLIFEEEFARI--KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       555 v~vwd~~~~~~~~~l--~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~  632 (894)
                      |++||+..++.+..+  .+|...|.+++|+|++++|++++.||.|++||++.++.+.                       
T Consensus       156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-----------------------  212 (402)
T 2aq5_A          156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA-----------------------  212 (402)
T ss_dssp             EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-----------------------
T ss_pred             EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee-----------------------
Confidence            899999999999998  8899999999999999999999999999999986543110                       


Q ss_pred             EEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEE
Q psy10063        633 IHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSI  712 (894)
Q Consensus       633 i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  712 (894)
                        .                                                                             
T Consensus       213 --~-----------------------------------------------------------------------------  213 (402)
T 2aq5_A          213 --E-----------------------------------------------------------------------------  213 (402)
T ss_dssp             --E-----------------------------------------------------------------------------
T ss_pred             --e-----------------------------------------------------------------------------
Confidence              0                                                                             


Q ss_pred             cCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCc-eEEEeeCCCCCEEEEe---cCCCcEEEEE
Q psy10063        713 NHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDI-GFKMPEPPKREKLALA---LADKVSERYR  788 (894)
Q Consensus       713 s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~-v~~la~spdg~~Latg---s~Dg~I~iwd  788 (894)
                                                                +..+|.+. +.+++|+|++.+|++|   +.|+.|++||
T Consensus       214 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd  251 (402)
T 2aq5_A          214 ------------------------------------------KDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD  251 (402)
T ss_dssp             ------------------------------------------EECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred             ------------------------------------------eccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence                                                      00123222 6688899999999999   8999999999


Q ss_pred             ccCCce-e--e--ccccCCCceEeecCCCeEEEEe-cCCCCceeEEEeecCCcce-eeeccC--CCCCeeEEEEeeCCcE
Q psy10063        789 DRKNKA-T--A--GFLLSCPDFLFDFDTTREVTTT-STKVGKFDARFYHLIFEEE-FARIKG--HFGPINSLAFHPDGKS  859 (894)
Q Consensus       789 ~~~~~~-~--~--~~~~~~~~~~fS~dg~~l~~as-~d~~g~~~I~vwd~~tg~~-l~~l~g--H~~~V~~l~fSpdg~~  859 (894)
                      ++..+. +  .  .+...+..++|+++++++++++ .++    .|+|||+..++. +..+..  |...|.+|+|+|++.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg----~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~  327 (402)
T 2aq5_A          252 TKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS----SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL  327 (402)
T ss_dssp             TTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS----CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS
T ss_pred             CccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC----eEEEEEecCCCcceEeecccccCCcccceEEeccccc
Confidence            988654 1  1  2233455778999999997665 455    599999998874 555544  5589999999999998


Q ss_pred             EEEecCCCcEEEEecCcccc
Q psy10063        860 YASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       860 LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      |++  .|+.+++|++..+.+
T Consensus       328 ~~s--~~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          328 EVN--KCEIARFYKLHERKC  345 (402)
T ss_dssp             CGG--GTEEEEEEEEETTEE
T ss_pred             cee--cceeEEEEEcCCCcE
Confidence            875  466899999987654

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=7.6e-30  Score=297.25  Aligned_cols=186  Identities=14%  Similarity=0.108  Sum_probs=162.3

Q ss_pred             EEecCCCCEEEEEEccC------CCEEEEecCCCcEEEEecCCCeE-----------EEEecCCCCCCeeEEEEcCCCCE
Q psy10063        404 QVTDQSAKITSLLWGNL------DQYIITGHAKGDICTWDLRMGRE-----------LESISGHAKEPINDMQFSKDATM  466 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spd------g~~L~sgs~Dg~I~iWd~~tg~~-----------~~~l~~h~~~~V~~v~~spdg~~  466 (894)
                      .+.+|.+.|.+|+|+|+      +++||+|+.||.|+|||+..++.           ...+.+|.. .|.+++|++++ +
T Consensus       202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~-~v~sv~~s~~~-~  279 (524)
T 2j04_B          202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS-LITTFDFLSPT-T  279 (524)
T ss_dssp             EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT-CEEEEEESSSS-E
T ss_pred             EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC-CEEEEEecCCC-e
Confidence            35678899999999997      57999999999999999987642           246788887 99999999864 8


Q ss_pred             EEEEeCCCCc-------------------cceEEE--EEecCC-CEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCee
Q psy10063        467 FITASHSQAV-------------------EPINDM--QFSKDA-TMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVN  521 (894)
Q Consensus       467 la~~~~d~~i-------------------~~V~~l--~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~  521 (894)
                      |++|+.|+.+                   ..|.+|  +|+++| .+||+|+.|+.|+|||+++++++..+..+   ..|.
T Consensus       280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~  359 (524)
T 2j04_B          280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV  359 (524)
T ss_dssp             EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred             EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence            9999998876                   478888  578888 89999999999999999998877666532   3588


Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      +++|+|+++.|++++.++.              |++||++.+.++..+.+|.+.|.+|+|+|+|++|++|+.||.|++|+
T Consensus       360 ~v~fsp~~~~l~s~~~d~t--------------v~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd  425 (524)
T 2j04_B          360 PVVYCPQIYSYIYSDGASS--------------LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN  425 (524)
T ss_dssp             CEEEETTTTEEEEECSSSE--------------EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred             ceEeCCCcCeEEEeCCCCc--------------EEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence            9999999999999988886              89999999998888999999999999999999999999999999999


Q ss_pred             CCCC
Q psy10063        602 LSNG  605 (894)
Q Consensus       602 l~~~  605 (894)
                      +..+
T Consensus       426 ~~~~  429 (524)
T 2j04_B          426 AARR  429 (524)
T ss_dssp             SCSS
T ss_pred             chHh
Confidence            8643

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=1.3e-29  Score=283.04  Aligned_cols=278  Identities=12%  Similarity=0.056  Sum_probs=203.5

Q ss_pred             cceeeeeccCccEEEecCCC--------eEEE--------------------EEecCCCCEEEEEEccCCCEEEEec---
Q psy10063        380 VDRLNSMSPAARKLATNAEP--------VVKM--------------------QVTDQSAKITSLLWGNLDQYIITGH---  428 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~--------~~~~--------------------~l~~H~~~V~~l~~spdg~~L~sgs---  428 (894)
                      ....++|++||++|+.++++        .+++                    .|.+|...|.+++|+  +++|++|.   
T Consensus        16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~   93 (365)
T 4h5i_A           16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNEN   93 (365)
T ss_dssp             CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCC
T ss_pred             CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCC
Confidence            34567899999999986432        1222                    355788888888764  56676654   


Q ss_pred             --------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE--CCC
Q psy10063        429 --------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS--KDH  498 (894)
Q Consensus       429 --------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs--~Dg  498 (894)
                              .|+.|++|++..+.....+..       .+.+...         ......+.+++|+|||++|++++  .|+
T Consensus        94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~-------~~~~~~~---------~~~~~~~~~v~fSpDg~~la~as~~~d~  157 (365)
T 4h5i_A           94 STKITQGKGNKHLRKFKYDKVNDQLEFLT-------SVDFDAS---------TNADDYTKLVYISREGTVAAIASSKVPA  157 (365)
T ss_dssp             HHHHHHTSCCCCEEEEEEETTTTEEEEEE-------EECSSCC---------CCTTCCEEEEEECTTSSCEEEEESCSSC
T ss_pred             ccEEEEecCCCcEEEEEecCCCceEEEee-------eeceeec---------CCcccCEEEEEEcCCCCEEEEEECCCCC
Confidence                    466788888765432111110       0000000         00002578899999999877554  789


Q ss_pred             CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCe
Q psy10063        499 TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPI  576 (894)
Q Consensus       499 ~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V  576 (894)
                      .|+|||+++++++..+.++..|.+|+|+|||++|++++.++               +++|+...++.+..  +.+|...|
T Consensus       158 ~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~---------------~~~~~~~~~~~~~~~~~~~~~~~v  222 (365)
T 4h5i_A          158 IMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS---------------LEVISTVTGSCIARKTDFDKNWSL  222 (365)
T ss_dssp             EEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC---------------EEEEETTTCCEEEEECCCCTTEEE
T ss_pred             EEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee---------------EEEEEeccCcceeeeecCCCCCCE
Confidence            99999999999999999999999999999999999998665               66777777766543  45688899


Q ss_pred             EEEEEecCCCEEEEEeCCC----cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeec
Q psy10063        577 NSLAFHPDGKSYASGGEDG----FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSG  652 (894)
Q Consensus       577 ~~l~~spdg~~l~sgs~Dg----~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sg  652 (894)
                      .+++|+|++++|++++.|+    .+++|++......                          ..                
T Consensus       223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~--------------------------~~----------------  260 (365)
T 4h5i_A          223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS--------------------------VL----------------  260 (365)
T ss_dssp             EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE--------------------------EE----------------
T ss_pred             EEEEEcCCCCEEEEEecCCcceeEEeecccccceec--------------------------ce----------------
Confidence            9999999999999999887    4666665322100                          00                


Q ss_pred             cccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccC
Q psy10063        653 SRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDA  732 (894)
Q Consensus       653 s~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~  732 (894)
                                                                                                      
T Consensus       261 --------------------------------------------------------------------------------  260 (365)
T 4h5i_A          261 --------------------------------------------------------------------------------  260 (365)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc----CCCceEee
Q psy10063        733 SPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL----SCPDFLFD  808 (894)
Q Consensus       733 ~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~----~~~~~~fS  808 (894)
                                         ....+.+|...|.+|+|+|||++||+|+.|+.|+|||+++++++..+..    .+.+++|+
T Consensus       261 -------------------~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS  321 (365)
T 4h5i_A          261 -------------------RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS  321 (365)
T ss_dssp             -------------------EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC
T ss_pred             -------------------eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC
Confidence                               0012345777899999999999999999999999999999988765543    45578899


Q ss_pred             cCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        809 FDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       809 ~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      |||++|++++.|+    .|+|||+...
T Consensus       322 pdg~~laS~S~D~----tvrvw~ip~~  344 (365)
T 4h5i_A          322 PDSTYVASVSAAN----TIHIIKLPLN  344 (365)
T ss_dssp             TTSCEEEEEETTS----EEEEEECCTT
T ss_pred             CCCCEEEEEeCCC----eEEEEEcCCC
Confidence            9999999999998    6999999643

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.97  E-value=6.1e-29  Score=275.56  Aligned_cols=250  Identities=13%  Similarity=0.118  Sum_probs=202.1

Q ss_pred             CCCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        408 QSAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       408 H~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      |.+.|.+++|+|+    |++|++|+.||.|+|||+.+++.+..+.+|..                         .|.+++
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-------------------------~i~~~~  122 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGN-------------------------AINELK  122 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCS-------------------------CEEEEE
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCC-------------------------cEEEEE
Confidence            6788999999999    67999999999999999999999999999987                         788888


Q ss_pred             Eec-CCCEEEEEECCCCEEEEEcCCCcEEEEE----eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        484 FSK-DATMFITASKDHTAKLFTTHDRQLLKTY----TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       484 ~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~----~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      |+| ++.+|++|+.||.|+|||++.++.+..+    .+...|.+++|+|++++|++++.++.              |++|
T Consensus       123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~i~  188 (366)
T 3k26_A          123 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS--------------LKLW  188 (366)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC--------------EEEE
T ss_pred             ECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCC--------------EEEE
Confidence            888 8999999999999999999999999988    35689999999999999999999997              7777


Q ss_pred             eccccceEEEc----------------------------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC
Q psy10063        559 HLIFEEEFARI----------------------------KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE  610 (894)
Q Consensus       559 d~~~~~~~~~l----------------------------~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~  610 (894)
                      |++.++.+..+                            .+|...|.+++|+  +++|++++.||.|++||+........
T Consensus       189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~  266 (366)
T 3k26_A          189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDID  266 (366)
T ss_dssp             ESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGG
T ss_pred             ECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccc
Confidence            77766544333                            3499999999998  77999999999999999876532100


Q ss_pred             CCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccC
Q psy10063        611 GSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD  690 (894)
Q Consensus       611 ~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~  690 (894)
                      .                             ..         ..   ...                               
T Consensus       267 ~-----------------------------~~---------~~---~~~-------------------------------  274 (366)
T 3k26_A          267 K-----------------------------IK---------PS---ESN-------------------------------  274 (366)
T ss_dssp             G-----------------------------CC---------TT---CCC-------------------------------
T ss_pred             c-----------------------------cc---------cC---Ccc-------------------------------
Confidence            0                             00         00   000                               


Q ss_pred             CcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCC
Q psy10063        691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPP  770 (894)
Q Consensus       691 ~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~sp  770 (894)
                                                                                 ......+.+|...|.+++|+|
T Consensus       275 -----------------------------------------------------------~~~~~~~~~~~~~v~~~~~s~  295 (366)
T 3k26_A          275 -----------------------------------------------------------VTILGRFDYSQCDIWYMRFSM  295 (366)
T ss_dssp             -----------------------------------------------------------EEEEEEEECSSCCSSCCCCEE
T ss_pred             -----------------------------------------------------------hheeccccccCCcEEEEEEcC
Confidence                                                                       000113445777788999999


Q ss_pred             C--CCEEEEecCCCcEEEEEccCCcee-------ecc--ccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        771 K--REKLALALADKVSERYRDRKNKAT-------AGF--LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       771 d--g~~Latgs~Dg~I~iwd~~~~~~~-------~~~--~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      +  +++|++++.||.|++||+..++.+       ..+  ...+..++|++++++|++++.|+    .|+|||+.
T Consensus       296 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----~i~iwd~~  365 (366)
T 3k26_A          296 DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA----SIWRWDRL  365 (366)
T ss_dssp             CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEEC-
T ss_pred             CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC----EEEEEEec
Confidence            9  999999999999999999887532       222  24455788999999999999987    69999985

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.97  E-value=2.1e-28  Score=272.38  Aligned_cols=188  Identities=12%  Similarity=0.137  Sum_probs=157.0

Q ss_pred             ccceeeeeccCccEEEecCCC-e------------EEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        379 SVDRLNSMSPAARKLATNAEP-V------------VKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~-~------------~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      .....++|++||++|+.+..+ .            ....+.+|.+.|.+++|+|++++|++++.||.|+|||+..++...
T Consensus         9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~   88 (372)
T 1k8k_C            9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP   88 (372)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence            344556777888877766321 1            444677899999999999999999999999999999999887655


Q ss_pred             Ee--cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE---EEEEe--CCC
Q psy10063        446 SI--SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQL---LKTYT--TER  518 (894)
Q Consensus       446 ~l--~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~---~~~~~--~~~  518 (894)
                      .+  ..|..                         .|.+++|+|++++|++++.|+.|++||++.++.   ...+.  +..
T Consensus        89 ~~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~  143 (372)
T 1k8k_C           89 TLVILRINR-------------------------AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS  143 (372)
T ss_dssp             EEECCCCSS-------------------------CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred             eEEeecCCC-------------------------ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC
Confidence            44  45655                         788899999999999999999999999998763   33332  467


Q ss_pred             CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec------------------cccceEEEccCCCCCeEEEE
Q psy10063        519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL------------------IFEEEFARIKGHFGPINSLA  580 (894)
Q Consensus       519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~------------------~~~~~~~~l~~h~~~V~~l~  580 (894)
                      .|.+++|+|++++|++++.++.              |++||+                  ..++.+..+.+|...|.+++
T Consensus       144 ~i~~~~~~~~~~~l~~~~~dg~--------------i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  209 (372)
T 1k8k_C          144 TVLSLDWHPNSVLLAAGSCDFK--------------CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC  209 (372)
T ss_dssp             CEEEEEECTTSSEEEEEETTSC--------------EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred             CeeEEEEcCCCCEEEEEcCCCC--------------EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence            8999999999999999999997              777774                  46788889999999999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        581 FHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       581 ~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      |+|++++|++++.||.|++||++.+
T Consensus       210 ~~~~~~~l~~~~~d~~i~i~d~~~~  234 (372)
T 1k8k_C          210 FSANGSRVAWVSHDSTVCLADADKK  234 (372)
T ss_dssp             ECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred             ECCCCCEEEEEeCCCEEEEEECCCC
Confidence            9999999999999999999998643

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.6e-28  Score=270.49  Aligned_cols=276  Identities=13%  Similarity=0.082  Sum_probs=221.4

Q ss_pred             CCccceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      +......++|++||++|+.+..+           .....+.+|.+.|.+++|+|++++|++++.||.|+|||+.+++++.
T Consensus        31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  110 (369)
T 3zwl_B           31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA  110 (369)
T ss_dssp             CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred             eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence            34455566788888888766432           2333677899999999999999999999999999999999999988


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC-----CCEEEEEcCCCcE----------
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD-----HTAKLFTTHDRQL----------  510 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~----------  510 (894)
                      .+. +..                         .|.+++|+|++++|++++.+     |.|++||+..++.          
T Consensus       111 ~~~-~~~-------------------------~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~  164 (369)
T 3zwl_B          111 TWK-SPV-------------------------PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE  164 (369)
T ss_dssp             EEE-CSS-------------------------CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred             Eee-cCC-------------------------CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence            887 554                         67888888888888888888     9999999876532          


Q ss_pred             -EEEEe-CCC--CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCC
Q psy10063        511 -LKTYT-TER--PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDG  585 (894)
Q Consensus       511 -~~~~~-~~~--~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg  585 (894)
                       +..+. +..  .+.+++|+|++++|++++.++.              |++||+.. ++.+..+..|...|.+++|+|++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~--------------i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~  230 (369)
T 3zwl_B          165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGK--------------ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL  230 (369)
T ss_dssp             CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSE--------------EEEEETTTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred             eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCE--------------EEEEECCCCcEeEEEEecCCCceeEEEECCCC
Confidence             22222 233  8999999999999999999986              89999998 78888899999999999999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEech
Q psy10063        586 KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKD  665 (894)
Q Consensus       586 ~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~  665 (894)
                      ++|++++.||.|++||++.++.+.                         .                              
T Consensus       231 ~~l~~~~~d~~i~v~d~~~~~~~~-------------------------~------------------------------  255 (369)
T 3zwl_B          231 TYFITSSRDTNSFLVDVSTLQVLK-------------------------K------------------------------  255 (369)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEE-------------------------E------------------------------
T ss_pred             CEEEEecCCceEEEEECCCCceee-------------------------e------------------------------
Confidence            999999999999999986543110                         0                              


Q ss_pred             hhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcc
Q psy10063        666 EQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTP  745 (894)
Q Consensus       666 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~  745 (894)
                                                                                                      
T Consensus       256 --------------------------------------------------------------------------------  255 (369)
T 3zwl_B          256 --------------------------------------------------------------------------------  255 (369)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC--------------cEEEEEccCCceeecc---ccCCCceEee
Q psy10063        746 FKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK--------------VSERYRDRKNKATAGF---LLSCPDFLFD  808 (894)
Q Consensus       746 ~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg--------------~I~iwd~~~~~~~~~~---~~~~~~~~fS  808 (894)
                                +. +...+.+++|+|++++|++++.++              .|++||...++.+..+   ...+..++|+
T Consensus       256 ----------~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s  324 (369)
T 3zwl_B          256 ----------YE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAIS  324 (369)
T ss_dssp             ----------EE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred             ----------ec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEEC
Confidence                      00 223466778888888888888877              8999999988876544   3445678899


Q ss_pred             cCCCeEEEEecCCCCceeEEEeecCCcceeeecc
Q psy10063        809 FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK  842 (894)
Q Consensus       809 ~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~  842 (894)
                      +++++|++++.|+    .|+||+++.+.....+.
T Consensus       325 ~~~~~l~s~~~dg----~v~iw~~~~~~~~~~~~  354 (369)
T 3zwl_B          325 PQGTSYASGGEDG----FIRLHHFEKSYFDFKYD  354 (369)
T ss_dssp             TTSSEEEEEETTS----EEEEEEECHHHHTCCCH
T ss_pred             CCCCEEEEEcCCC----eEEEEECccccchhHHH
Confidence            9999999999887    69999999876554443

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=7.3e-28  Score=270.59  Aligned_cols=276  Identities=14%  Similarity=0.070  Sum_probs=223.1

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEE-EEEECCCCE
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMF-ITASKDHTA  500 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L-~sgs~Dg~V  500 (894)
                      .+|++++.|+.|+|||+.+++++..+..|.                          .+.+++|+|+|++| ++++.|+.|
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~--------------------------~~~~~~~s~dg~~l~~~~~~d~~i   56 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIPVGS--------------------------NPMGAVISPDGTKVYVANAHSNDV   56 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECSS--------------------------SEEEEEECTTSSEEEEEEGGGTEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEeecCC--------------------------CcceEEECCCCCEEEEECCCCCeE
Confidence            468889999999999999999999988775                          47788888888876 566689999


Q ss_pred             EEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063        501 KLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  580 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~  580 (894)
                      ++||+.+++++..+.++..+.+++|+|+|++|++++.+..             .|++||+..++.+..+..| ..+.+++
T Consensus        57 ~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-------------~v~v~d~~~~~~~~~~~~~-~~~~~~~  122 (391)
T 1l0q_A           57 SIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASS-------------TLSVIDTTSNTVAGTVKTG-KSPLGLA  122 (391)
T ss_dssp             EEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT-------------EEEEEETTTTEEEEEEECS-SSEEEEE
T ss_pred             EEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCC-------------EEEEEECCCCeEEEEEeCC-CCcceEE
Confidence            9999999999999998889999999999999988776533             2899999999988887655 4689999


Q ss_pred             EecCCCEE-EEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCc
Q psy10063        581 FHPDGKSY-ASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSG  659 (894)
Q Consensus       581 ~spdg~~l-~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~  659 (894)
                      |+++|++| ++++.|+.|++||+..++.+.                                                  
T Consensus       123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~--------------------------------------------------  152 (391)
T 1l0q_A          123 LSPDGKKLYVTNNGDKTVSVINTVTKAVIN--------------------------------------------------  152 (391)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEE--------------------------------------------------
T ss_pred             ECCCCCEEEEEeCCCCEEEEEECCCCcEEE--------------------------------------------------
Confidence            99999977 677889999999986543110                                                  


Q ss_pred             eEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeec
Q psy10063        660 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWG  739 (894)
Q Consensus       660 i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~  739 (894)
                                                                                                      
T Consensus       153 --------------------------------------------------------------------------------  152 (391)
T 1l0q_A          153 --------------------------------------------------------------------------------  152 (391)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCcccccCCCCcceecCCCCceEEEeeCCCCCEE-EEecCCCcEEEEEccCCceeeccc--cCCCceEeecCCCeEEE
Q psy10063        740 HIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL-ALALADKVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVT  816 (894)
Q Consensus       740 ~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L-atgs~Dg~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~  816 (894)
                                     .+..| ..+.+++|+|++++| ++++.|+.|++||+..++.+..+.  .....++|+++|+++++
T Consensus       153 ---------------~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~  216 (391)
T 1l0q_A          153 ---------------TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYV  216 (391)
T ss_dssp             ---------------EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEE
T ss_pred             ---------------EEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEE
Confidence                           00001 124678899999887 577889999999999887755443  23446789999999998


Q ss_pred             EecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEE-EEecCCCcEEEEecCcccccccccc
Q psy10063        817 TTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY-ASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       817 as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~L-aS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      +..+. ++..|++||+..++++..+..|. .+.+++|+|||++| ++++.|+.|+|||++.++++..+..
T Consensus       217 ~~~~~-~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~  284 (391)
T 1l0q_A          217 TNVDK-YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV  284 (391)
T ss_dssp             EEECS-SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             EecCc-CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence            88421 11169999999999998888875 47899999999877 6779999999999998888776654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.5e-29  Score=289.19  Aligned_cols=273  Identities=9%  Similarity=0.085  Sum_probs=214.9

Q ss_pred             EEccCCCEEEEecCCCcEEEEecCCCeEEEEe-cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec-CCCEEEE
Q psy10063        416 LWGNLDQYIITGHAKGDICTWDLRMGRELESI-SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK-DATMFIT  493 (894)
Q Consensus       416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l-~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp-dg~~L~s  493 (894)
                      .|+|+++.+++++      +|+ ..++++..+ .+|.+                         .|.+|+|+| ++++|++
T Consensus        34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~-------------------------~V~~~~~s~~~~~~l~s   81 (437)
T 3gre_A           34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPN-------------------------SITSSAVSPGETPYLIT   81 (437)
T ss_dssp             GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTS-------------------------CEEEEEEECSSSCEEEE
T ss_pred             hcCCccccccccc------ccc-ccceEEeeeccCCCC-------------------------ceEEEEECCCCCCEEEE
Confidence            3677888777765      488 558888888 78877                         789999999 9999999


Q ss_pred             EECCCCEEEEEcCC---Cc---EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc---ccc
Q psy10063        494 ASKDHTAKLFTTHD---RQ---LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI---FEE  564 (894)
Q Consensus       494 gs~Dg~V~iwdl~~---~~---~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~---~~~  564 (894)
                      |+.||.|+|||+..   +.   +...+.|...|.+++|+|++.+|++++.++.+              ++||+.   .++
T Consensus        82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i--------------~vwd~~~~~~~~  147 (437)
T 3gre_A           82 GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI--------------IVLKVNHYQQES  147 (437)
T ss_dssp             EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE--------------EEEEEEEEEETT
T ss_pred             ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE--------------EEEEeccccCCc
Confidence            99999999999876   33   45566788999999999999999999999984              555542   333


Q ss_pred             eEE--------Ecc--C--CCCCeEEEE--EecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecC
Q psy10063        565 EFA--------RIK--G--HFGPINSLA--FHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       565 ~~~--------~l~--~--h~~~V~~l~--~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~  630 (894)
                      .+.        .+.  .  +...+.++.  +++++.+|++|+.||.|++||++.++.+                      
T Consensus       148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----------------------  205 (437)
T 3gre_A          148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL----------------------  205 (437)
T ss_dssp             EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE----------------------
T ss_pred             eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee----------------------
Confidence            322        221  2  556777777  5578999999999999999998654311                      


Q ss_pred             CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063        631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM  710 (894)
Q Consensus       631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  710 (894)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (437)
T 3gre_A          206 --------------------------------------------------------------------------------  205 (437)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecC--CCCceEEEeeCCCCCEEEEecCCCcEEEEE
Q psy10063        711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAG--PVDIGFKMPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~--h~~~v~~la~spdg~~Latgs~Dg~I~iwd  788 (894)
                                                                 ..+.+  |.+.|.+++|+|++.+|++|+.||.|++||
T Consensus       206 -------------------------------------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd  242 (437)
T 3gre_A          206 -------------------------------------------QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWD  242 (437)
T ss_dssp             -------------------------------------------EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             -------------------------------------------EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence                                                       00111  556789999999999999999999999999


Q ss_pred             ccCCceeeccccC----CCceE----eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC-----------------
Q psy10063        789 DRKNKATAGFLLS----CPDFL----FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG-----------------  843 (894)
Q Consensus       789 ~~~~~~~~~~~~~----~~~~~----fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g-----------------  843 (894)
                      ++.++.+..+...    +..++    |++++.++++++.++    .|+|||+..++++..+.+                 
T Consensus       243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  318 (437)
T 3gre_A          243 IRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT----FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL  318 (437)
T ss_dssp             TTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE----EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred             cCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC----cEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence            9998887655422    33553    456788899888887    699999999987766653                 


Q ss_pred             ---------CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        844 ---------HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       844 ---------H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                               |...|.+|+|+ ++++|++|+.||.|+||++..++....+.
T Consensus       319 ~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~  367 (437)
T 3gre_A          319 EELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI  367 (437)
T ss_dssp             GGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred             ccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence                     55668899999 88999999999999999999988776664

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.4e-27  Score=269.92  Aligned_cols=271  Identities=13%  Similarity=0.162  Sum_probs=212.3

Q ss_pred             ceeeeeccCccEEEecCC-C-eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEE
Q psy10063        381 DRLNSMSPAARKLATNAE-P-VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDM  458 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~-~-~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v  458 (894)
                      ..+++.+.||.+.+.... . ........|.+.|.+++|+|++++|++|+.||.|+|||+.+++.+..+.+|..      
T Consensus       104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------  177 (401)
T 4aez_A          104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA------  177 (401)
T ss_dssp             TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS------
T ss_pred             CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC------
Confidence            344455555555444322 2 22233334899999999999999999999999999999999999999999987      


Q ss_pred             EEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC-CCcEEEEEe-CCCCeeEEEEcCCCCEEEEEE
Q psy10063        459 QFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH-DRQLLKTYT-TERPVNSAALSPILPHVVLGG  536 (894)
Q Consensus       459 ~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~-~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~  536 (894)
                                         .|.+++|  ++.+|++|+.||.|++||++ .+..+..+. |...|.+++|+|++.+|++++
T Consensus       178 -------------------~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  236 (401)
T 4aez_A          178 -------------------RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG  236 (401)
T ss_dssp             -------------------CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             -------------------ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence                               6788888  46799999999999999999 456666665 568999999999999999999


Q ss_pred             CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEe--CCCcEEEEECCCCccccCCCc
Q psy10063        537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGG--EDGFLISNTLSNGLDISEGSF  613 (894)
Q Consensus       537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs--~Dg~I~vwdl~~~~~~~~~~~  613 (894)
                      .++.              |++||+..++.+..+.+|...|.+++|+|++. +|++++  .||.|++||+..++.+.    
T Consensus       237 ~d~~--------------v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~----  298 (401)
T 4aez_A          237 NDNV--------------VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN----  298 (401)
T ss_dssp             TTSC--------------EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE----
T ss_pred             CCCe--------------EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE----
Confidence            9997              89999999999999999999999999999775 555654  69999999986542110    


Q ss_pred             eeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcc
Q psy10063        614 TSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  693 (894)
Q Consensus       614 v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  693 (894)
                                                                                                      
T Consensus       299 --------------------------------------------------------------------------------  298 (401)
T 4aez_A          299 --------------------------------------------------------------------------------  298 (401)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC
Q psy10063        694 SVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE  773 (894)
Q Consensus       694 ~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~  773 (894)
                                                                                   .+ .+...|.+++|+|++.
T Consensus       299 -------------------------------------------------------------~~-~~~~~v~~~~~s~~~~  316 (401)
T 4aez_A          299 -------------------------------------------------------------TV-DAGSQVTSLIWSPHSK  316 (401)
T ss_dssp             -------------------------------------------------------------EE-ECSSCEEEEEECSSSS
T ss_pred             -------------------------------------------------------------EE-eCCCcEEEEEECCCCC
Confidence                                                                         00 0223578999999999


Q ss_pred             EEEE--ecCCCcEEEEEccCCceee-----ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc
Q psy10063        774 KLAL--ALADKVSERYRDRKNKATA-----GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK  842 (894)
Q Consensus       774 ~Lat--gs~Dg~I~iwd~~~~~~~~-----~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~  842 (894)
                      +|++  |+.|+.|+||++...+...     .+...+..++|+++|.+|++++.|+    .|+||++..++++..+.
T Consensus       317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg----~i~iw~~~~~~~~~~~~  388 (401)
T 4aez_A          317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE----NLKFWRVYDGDHVKRPI  388 (401)
T ss_dssp             EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS----EEEEEECCC--------
T ss_pred             eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC----cEEEEECCCCccccccc
Confidence            9998  5589999999998855432     3445677889999999999999887    69999999998876554

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=3.6e-28  Score=260.44  Aligned_cols=290  Identities=11%  Similarity=0.075  Sum_probs=192.5

Q ss_pred             EEEEEEccCCC---EEEEecCCCcEEEEecCCC---eEEEEecCCCCCCeeEEEEcCCCCE-EEEEeCCCCccceEEEEE
Q psy10063        412 ITSLLWGNLDQ---YIITGHAKGDICTWDLRMG---RELESISGHAKEPINDMQFSKDATM-FITASHSQAVEPINDMQF  484 (894)
Q Consensus       412 V~~l~~spdg~---~L~sgs~Dg~I~iWd~~tg---~~~~~l~~h~~~~V~~v~~spdg~~-la~~~~d~~i~~V~~l~~  484 (894)
                      |.++.|-..|-   .|+++++ ..|++|+...+   ++++.+.+|+. +|..|+|.||..- +.++-..-.++.|.+|+|
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~  119 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEV-PVLQIVPVPDVYNLVCVALGNLEIREIRALFC  119 (356)
T ss_dssp             EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSS-CEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred             EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCc-eeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence            55666654433   6677775 58999999999   89999999998 9999999998654 445555666789999999


Q ss_pred             ecC----CCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        485 SKD----ATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       485 spd----g~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      +||    ++++++++.+  ++||++.+++++....  |...|..++|+|+                              
T Consensus       120 spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d------------------------------  167 (356)
T 2w18_A          120 SSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAED------------------------------  167 (356)
T ss_dssp             ------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTT------------------------------
T ss_pred             CCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCC------------------------------
Confidence            999    9999998844  8889876666555432  2344444444444                              


Q ss_pred             eccccceEEEccCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHP---DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~sp---dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                          |+.+..+.+|...+..++|++   ++.+|++++.|+.|+|||+++++.+.                         .
T Consensus       168 ----G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~-------------------------t  218 (356)
T 2w18_A          168 ----GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLK-------------------------K  218 (356)
T ss_dssp             ----SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEE-------------------------E
T ss_pred             ----CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEE-------------------------E
Confidence                455555668888999999999   77999999999999999998875331                         0


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                      +..+..                                                             .......++|+++
T Consensus       219 L~g~~~-------------------------------------------------------------~v~~v~~vafSpd  237 (356)
T 2w18_A          219 MHIDDS-------------------------------------------------------------YQASVCHKAYSEM  237 (356)
T ss_dssp             EECCC----------------------------------------------------------------CCCEEEEEEET
T ss_pred             EcCCCc-------------------------------------------------------------ceeeeEEEEECCC
Confidence            100000                                                             0000000122222


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCce
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                      |..++...                                             .++ ...|++|+.|++|++|+...++.
T Consensus       238 G~~lvs~s---------------------------------------------~~~~~w~laSGs~D~tIklWd~~tgk~  272 (356)
T 2w18_A          238 GLLFIVLS---------------------------------------------HPCAKESESLRSPVFQLIVINPKTTLS  272 (356)
T ss_dssp             TEEEEEEC---------------------------------------------------------CCEEEEEEETTTTEE
T ss_pred             CCEEEEec---------------------------------------------cCCCcceeeccCCCcEEEEEECCCCEE
Confidence            22111100                                             000 12467899999999999998887


Q ss_pred             eeccc----cCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCee-EEEEeeCCcEEEEecCCC
Q psy10063        795 TAGFL----LSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN-SLAFHPDGKSYASGGEDG  867 (894)
Q Consensus       795 ~~~~~----~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~-~l~fSpdg~~LaS~s~Dg  867 (894)
                      +..+.    .++.  .+..+.++..+++++.|+    .|+|||+.+|+++..|.+|...|. +|+|||||++|++|+.|+
T Consensus       273 l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~Dg----TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~  348 (356)
T 2w18_A          273 VGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSG----TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG  348 (356)
T ss_dssp             EEEEEECCCTTCCCCEEEEEEETTEEEEEETTS----CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred             EEEEEeeccCCCcceeEccccCCCEEEEEcCCC----cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence            54331    2222  222344467788888887    699999999999999999988765 589999999999999999


Q ss_pred             cEEEEec
Q psy10063        868 FVRLHTF  874 (894)
Q Consensus       868 ~V~vWdl  874 (894)
                      .|||||+
T Consensus       349 TIklWd~  355 (356)
T 2w18_A          349 NIFVYHY  355 (356)
T ss_dssp             CEEEEEE
T ss_pred             cEEEecC
Confidence            9999996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.96  E-value=1.6e-28  Score=276.30  Aligned_cols=280  Identities=12%  Similarity=0.043  Sum_probs=217.6

Q ss_pred             ceeeeeccCccEEEecCCC-e------EEEEEecCCCCEEEEEEccC----C---CEEEEecCCCcEEEEecCCCeE---
Q psy10063        381 DRLNSMSPAARKLATNAEP-V------VKMQVTDQSAKITSLLWGNL----D---QYIITGHAKGDICTWDLRMGRE---  443 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~-~------~~~~l~~H~~~V~~l~~spd----g---~~L~sgs~Dg~I~iWd~~tg~~---  443 (894)
                      ..+...+.||.+.+..... .      ....+.+|...|.+++|+|+    |   ++|++++.||.|+|||+..++.   
T Consensus        27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~  106 (397)
T 1sq9_A           27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK  106 (397)
T ss_dssp             SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred             CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence            4555556666655544332 2      35577899999999999999    9   9999999999999999998886   


Q ss_pred             --EEEecCCC-----CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe----cCCCE-EEEEECCCCEEEEEcCC----
Q psy10063        444 --LESISGHA-----KEPINDMQFSKDATMFITASHSQAVEPINDMQFS----KDATM-FITASKDHTAKLFTTHD----  507 (894)
Q Consensus       444 --~~~l~~h~-----~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s----pdg~~-L~sgs~Dg~V~iwdl~~----  507 (894)
                        +..+..|.     .                         .|.+++|+    |++.+ |++++.||.|++||++.    
T Consensus       107 ~~~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  161 (397)
T 1sq9_A          107 VIFEKLDLLDSDMKKH-------------------------SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE  161 (397)
T ss_dssp             EEEEEECCSCTTGGGS-------------------------CEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred             ccceeecccccccCCC-------------------------cEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence              78888884     4                         68888888    89999 99999999999999998    


Q ss_pred             --CcEEE-----EEe--------CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC-
Q psy10063        508 --RQLLK-----TYT--------TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG-  571 (894)
Q Consensus       508 --~~~~~-----~~~--------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~-  571 (894)
                        ++.+.     .+.        +...|.+++|+|++ +|++++.++.              |++||++.++.+..+.. 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~--------------i~i~d~~~~~~~~~~~~~  226 (397)
T 1sq9_A          162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT--------------VQISELSTLRPLYNFESQ  226 (397)
T ss_dssp             HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE--------------EEEEETTTTEEEEEEECC
T ss_pred             cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc--------------EEEEECCCCceeEEEecc
Confidence              66655     553        46789999999999 9999988886              89999999999999988 


Q ss_pred             --C---CCCeEEEEEecCCCEEEEEeCC---CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        572 --H---FGPINSLAFHPDGKSYASGGED---GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       572 --h---~~~V~~l~~spdg~~l~sgs~D---g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                        |   ...|.+++|+|++++|++++.|   |.|++||++.++.+                         ..+...... 
T Consensus       227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~-------------------------~~~~~~~~~-  280 (397)
T 1sq9_A          227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI-------------------------GSLSVPTHS-  280 (397)
T ss_dssp             C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE-------------------------EEECBC----
T ss_pred             ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc-------------------------ceeccCccc-
Confidence              9   9999999999999999999999   99999999764321                         000000000 


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                                                                                      
T Consensus       281 --------------------------------------------------------------------------------  280 (397)
T 1sq9_A          281 --------------------------------------------------------------------------------  280 (397)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc----
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL----  799 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~----  799 (894)
                                                .........|...|.+++|+|++++|++++.|+.|+|||+..++.+..+.    
T Consensus       281 --------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  334 (397)
T 1sq9_A          281 --------------------------SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD  334 (397)
T ss_dssp             -------------------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred             --------------------------ccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccC
Confidence                                      00000011366789999999999999999999999999999888765544    


Q ss_pred             --------------------cCCCceEeecCC----------CeEEEEecCCCCceeEEEeecCCcc
Q psy10063        800 --------------------LSCPDFLFDFDT----------TREVTTTSTKVGKFDARFYHLIFEE  836 (894)
Q Consensus       800 --------------------~~~~~~~fS~dg----------~~l~~as~d~~g~~~I~vwd~~tg~  836 (894)
                                          ..+..++|++++          .++++++.++    .|+||++++|+
T Consensus       335 ~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg----~i~iw~~~~g~  397 (397)
T 1sq9_A          335 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR----SIRWFREAGGK  397 (397)
T ss_dssp             GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT----EEEEEEEEC--
T ss_pred             cccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC----cEEEEEcCCCC
Confidence                                234577899999          6888888887    69999998764

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.96  E-value=2.5e-28  Score=269.82  Aligned_cols=213  Identities=15%  Similarity=0.231  Sum_probs=177.1

Q ss_pred             ccceeeeeccCccEEE-ecC----CCeEE-----------EEEecCCCCEEEEEEccC---CCEEEEecCCCcEEEEecC
Q psy10063        379 SVDRLNSMSPAARKLA-TNA----EPVVK-----------MQVTDQSAKITSLLWGNL---DQYIITGHAKGDICTWDLR  439 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~-~~~----~~~~~-----------~~l~~H~~~V~~l~~spd---g~~L~sgs~Dg~I~iWd~~  439 (894)
                      .....++|+|+|..|+ .+.    +..++           ....+|...|.+++|+|+   |++|++|+.||.|+|||+.
T Consensus        19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~   98 (357)
T 3i2n_A           19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE   98 (357)
T ss_dssp             SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred             CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence            3445567777775443 332    22222           234479999999999998   6999999999999999999


Q ss_pred             CCe-EEEEecCCCCCCeeEEEE------cCCCCEEEEEeCCCCc-----------------------cceEEEE----Ee
Q psy10063        440 MGR-ELESISGHAKEPINDMQF------SKDATMFITASHSQAV-----------------------EPINDMQ----FS  485 (894)
Q Consensus       440 tg~-~~~~l~~h~~~~V~~v~~------spdg~~la~~~~d~~i-----------------------~~V~~l~----~s  485 (894)
                      .++ .+..+.+|.. .|.+++|      ++++++|++++.|+.+                       ..|.+++    |+
T Consensus        99 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  177 (357)
T 3i2n_A           99 APEMPVYSVKGHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN  177 (357)
T ss_dssp             SCSSCSEEECCCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred             CCCccEEEEEeccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence            988 8899999998 9999954      6899999999999876                       1677888    67


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcC---CCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSP---ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~sp---dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      +++.+|++++.||.|++||++.++++....+...|.+++|+|   ++.+|++++.++.              |++||++.
T Consensus       178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~--------------i~i~d~~~  243 (357)
T 3i2n_A          178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK--------------FHVFDMRT  243 (357)
T ss_dssp             -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE--------------EEEEEEEE
T ss_pred             CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe--------------EEEEeCcC
Confidence            899999999999999999999999988888889999999999   9999999999997              77888776


Q ss_pred             cceEEEc-----cCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCc
Q psy10063        563 EEEFARI-----KGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       563 ~~~~~~l-----~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ++.+..+     .+|...|.+++|+|+++ +|++++.||.|++||++.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  293 (357)
T 3i2n_A          244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI  293 (357)
T ss_dssp             EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred             CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence            6654444     38999999999999998 89999999999999987543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=6.5e-28  Score=268.17  Aligned_cols=294  Identities=8%  Similarity=0.042  Sum_probs=213.0

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.+|.+.|.+|+|+|||++|++|+.|+ ++||++..++.+.....+                           .+..++
T Consensus        14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~---------------------------~~~~~~   65 (355)
T 3vu4_A           14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR---------------------------HLSKVR   65 (355)
T ss_dssp             -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS---------------------------CCCEEE
T ss_pred             ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC---------------------------CeEEEE
Confidence            4578999999999999999999998775 789999987766554322                           245566


Q ss_pred             EecCCCEE-EEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        484 FSKDATMF-ITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       484 ~spdg~~L-~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      |.+++.++ ++++.|+.|+|||+++++++..+.+...|.+++|++++  ++++. ++.              |++||+..
T Consensus        66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~-~~~--------------i~i~d~~~  128 (355)
T 3vu4_A           66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSY-GDV--------------ISVFKFGN  128 (355)
T ss_dssp             ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEE-TTE--------------EEEEESST
T ss_pred             EcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEE-cCE--------------EEEEECCC
Confidence            66666666 55777899999999999999999998999999999863  44444 443              88999988


Q ss_pred             c-ceEEEccCCCCCeEEEEEecCCCEEEE--EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        563 E-EEFARIKGHFGPINSLAFHPDGKSYAS--GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       563 ~-~~~~~l~~h~~~V~~l~~spdg~~l~s--gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      + +.+..+..   ....+++++  .+|+.  |+.||.|++||+..+......+                           
T Consensus       129 ~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~---------------------------  176 (355)
T 3vu4_A          129 PWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQD---------------------------  176 (355)
T ss_dssp             TCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-----------------------------------
T ss_pred             CceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCcccccc---------------------------
Confidence            7 66655544   444566666  56665  5789999999997643110000                           


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                                        ....                                       .                  
T Consensus       177 ------------------~~~~---------------------------------------~------------------  181 (355)
T 3vu4_A          177 ------------------QGVQ---------------------------------------Q------------------  181 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ------------------cccc---------------------------------------c------------------
Confidence                              0000                                       0                  


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCC-cceecCCCCceEEEeeCCCCCEEEEecCCCc-EEEEEccCCceeec
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSD-TPILAGPVDIGFKMPEPPKREKLALALADKV-SERYRDRKNKATAG  797 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~-~~~~~~h~~~v~~la~spdg~~Latgs~Dg~-I~iwd~~~~~~~~~  797 (894)
                                                  ..... ...+.+|.+.|.+++|+|++++||+|+.|+. |+|||+++++.+..
T Consensus       182 ----------------------------~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~  233 (355)
T 3vu4_A          182 ----------------------------KAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE  233 (355)
T ss_dssp             ---------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred             ----------------------------cccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence                                        00000 2345679999999999999999999999998 99999999888665


Q ss_pred             cc-----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCccee--eecc---------------------CCCCCee
Q psy10063        798 FL-----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF--ARIK---------------------GHFGPIN  849 (894)
Q Consensus       798 ~~-----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l--~~l~---------------------gH~~~V~  849 (894)
                      +.     ..+..++|+|+|++|++++.|+    .|+|||+..+...  ..+.                     .+...+.
T Consensus       234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (355)
T 3vu4_A          234 FRRGLDRADVVDMKWSTDGSKLAVVSDKW----TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC  309 (355)
T ss_dssp             EECTTCCSCEEEEEECTTSCEEEEEETTC----EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred             EEcCCCCCcEEEEEECCCCCEEEEEECCC----EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence            54     3345788999999999999987    6999999765321  1111                     1122346


Q ss_pred             EEEEeeCCcEEEEecCCCcEEEEecCcccccc
Q psy10063        850 SLAFHPDGKSYASGGEDGFVRLHTFDQAYFDY  881 (894)
Q Consensus       850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~  881 (894)
                      .++|++||++|++++.||.+++|++..++...
T Consensus       310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~  341 (355)
T 3vu4_A          310 KIAWISESSLVVVWPHTRMIETFKVVFDDEME  341 (355)
T ss_dssp             EEEESSSSEEEEEETTTTEEEEEEEEEETTTT
T ss_pred             EEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCc
Confidence            79999999999999999999999987655433

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.96  E-value=2.5e-27  Score=272.92  Aligned_cols=295  Identities=14%  Similarity=0.121  Sum_probs=216.1

Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +.++.|  ++.+|++|+.||.|+|||+.+++++..+. |.+.|.+++|++++ +|++++.++.              |++
T Consensus       125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~--------------i~v  187 (464)
T 3v7d_B          125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT--------------VRV  187 (464)
T ss_dssp             EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSC--------------EEE
T ss_pred             EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC--------------EEE
Confidence            455555  46799999999999999999999999988 56899999999988 9999999997              899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEe--cCCCEEEEEeCCCcEEEEECCCCccccCCC---ceeeeEECcCCc--EEEecC
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFH--PDGKSYASGGEDGFLISNTLSNGLDISEGS---FTSSSTQQPDGL--VYPSQG  630 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~s--pdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~---~v~~~~~spdg~--~l~~~~  630 (894)
                      ||++.++.+..+.+|...|.+++|+  +++.+|++|+.||.|++||+..+.......   ....+.+.+.+.  .+....
T Consensus       188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (464)
T 3v7d_B          188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR  267 (464)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred             EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence            9999999999999999999999999  578899999999999999998765432110   000011111100  000000


Q ss_pred             CeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeE
Q psy10063        631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRM  710 (894)
Q Consensus       631 g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  710 (894)
                      +                                               +.+..                          .
T Consensus       268 ~-----------------------------------------------~~~~v--------------------------~  274 (464)
T 3v7d_B          268 G-----------------------------------------------HMASV--------------------------R  274 (464)
T ss_dssp             C-----------------------------------------------CSSCE--------------------------E
T ss_pred             C-----------------------------------------------ccceE--------------------------E
Confidence            0                                               00000                          0


Q ss_pred             EEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063        711 SINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDR  790 (894)
Q Consensus       711 ~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~  790 (894)
                      .+.+++..++.+..++       .+.+|+...+       +....+.+|...|.+++|+|++.+|++|+.|+.|++||++
T Consensus       275 ~~~~~~~~l~~~~~d~-------~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~  340 (464)
T 3v7d_B          275 TVSGHGNIVVSGSYDN-------TLIVWDVAQM-------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE  340 (464)
T ss_dssp             EEEEETTEEEEEETTS-------CEEEEETTTT-------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             EEcCCCCEEEEEeCCC-------eEEEEECCCC-------cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            1122333333333222       2445543322       2233566789999999999999999999999999999999


Q ss_pred             CCceeeccccCCC-ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcE
Q psy10063        791 KNKATAGFLLSCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFV  869 (894)
Q Consensus       791 ~~~~~~~~~~~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V  869 (894)
                      .++.+..+..... ..++..++.++++++.|+    .|++||+..++....+ .|...+..++|++++++|++++ ||.|
T Consensus       341 ~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg----~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i  414 (464)
T 3v7d_B          341 NGELMYTLQGHTALVGLLRLSDKFLVSAAADG----SIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQF  414 (464)
T ss_dssp             TTEEEEEECCCSSCEEEEEECSSEEEEEETTS----EEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEE
T ss_pred             CCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCC----cEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeE
Confidence            9887766543322 223455689999999987    6999999988766555 3677888999999999999998 8999


Q ss_pred             EEEecCcccccccc
Q psy10063        870 RLHTFDQAYFDYTF  883 (894)
Q Consensus       870 ~vWdl~~~~~~~~~  883 (894)
                      +||+++.++++..+
T Consensus       415 ~iwd~~~g~~~~~~  428 (464)
T 3v7d_B          415 NIYNLRSGKLVHAN  428 (464)
T ss_dssp             EEEETTTCCEEESC
T ss_pred             EEEECCCCcEEehh
Confidence            99999999888763

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.96  E-value=9.4e-27  Score=255.49  Aligned_cols=278  Identities=18%  Similarity=0.252  Sum_probs=208.8

Q ss_pred             CCccceeeeeccC-ccEEEecCCC-eE---------------EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC
Q psy10063        377 PLSVDRLNSMSPA-ARKLATNAEP-VV---------------KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR  439 (894)
Q Consensus       377 ~~~~~~~~~~s~d-g~~l~~~~~~-~~---------------~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~  439 (894)
                      +......++|+|+ +++|+.++.+ .+               ...+.+|...|.+++|+|+|++|++|+.|+.|++|+..
T Consensus        37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~  116 (340)
T 4aow_A           37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT  116 (340)
T ss_dssp             CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence            4445566678876 5677765442 22               23567899999999999999999999999999999999


Q ss_pred             CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CC
Q psy10063        440 MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TE  517 (894)
Q Consensus       440 tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~  517 (894)
                      .+.....+..+..                         .+..+.+++++.+|++++.|+.+++||+..........  +.
T Consensus       117 ~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~  171 (340)
T 4aow_A          117 TGTTTRRFVGHTK-------------------------DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHS  171 (340)
T ss_dssp             TTEEEEEEECCSS-------------------------CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCS
T ss_pred             ccceeeeecCCCC-------------------------ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecccc
Confidence            9998888887776                         67778888899999999999999999998765544332  35


Q ss_pred             CCeeEEEEcCCC--CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        518 RPVNSAALSPIL--PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       518 ~~v~~l~~spdg--~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      ..+.+++|++++  .++++++.++.              |++||++.++.+..+.+|.+.|.+|+|+|++++|++|+.||
T Consensus       172 ~~v~~~~~~~~~~~~~~~s~~~d~~--------------i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg  237 (340)
T 4aow_A          172 EWVSCVRFSPNSSNPIIVSCGWDKL--------------VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG  237 (340)
T ss_dssp             SCEEEEEECSCSSSCEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred             CcccceEEccCCCCcEEEEEcCCCE--------------EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence            789999999875  46778888886              89999999999999999999999999999999999999999


Q ss_pred             cEEEEECCCCcccc---CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063        596 FLISNTLSNGLDIS---EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMAR  672 (894)
Q Consensus       596 ~I~vwdl~~~~~~~---~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~  672 (894)
                      .|++||++..+.+.   ....+..+.|+|++.++                        .++  .++.|++|+......  
T Consensus       238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~------------------------~~~--~d~~i~iwd~~~~~~--  289 (340)
T 4aow_A          238 QAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL------------------------CAA--TGPSIKIWDLEGKII--  289 (340)
T ss_dssp             EEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE------------------------EEE--ETTEEEEEETTTTEE--
T ss_pred             eEEEEEeccCceeeeecCCceEEeeecCCCCcee------------------------ecc--CCCEEEEEECCCCeE--
Confidence            99999998876442   23344555555554433                        222  245555554221000  


Q ss_pred             hcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccC-CC
Q psy10063        673 NRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLD-GS  751 (894)
Q Consensus       673 ~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~d-g~  751 (894)
                                            +          .                                        ... ..
T Consensus       290 ----------------------~----------~----------------------------------------~~~~~~  297 (340)
T 4aow_A          290 ----------------------V----------D----------------------------------------ELKQEV  297 (340)
T ss_dssp             ----------------------E----------E----------------------------------------EECCC-
T ss_pred             ----------------------E----------E----------------------------------------eccccc
Confidence                                  0          0                                        000 00


Q ss_pred             CcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCc
Q psy10063        752 DTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNK  793 (894)
Q Consensus       752 ~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~  793 (894)
                      ......+|...|.+++|+|++++||+|+.||.|+|||+.++.
T Consensus       298 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          298 ISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             ------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             eeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            011234688899999999999999999999999999988764

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.96  E-value=8.5e-29  Score=276.77  Aligned_cols=239  Identities=14%  Similarity=0.099  Sum_probs=192.0

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCC--cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDR--QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~--~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.+++|+|+|++|++|+.|+.|+|||+..+  +++..+. |...|.+++|+|++++|++++.++.              
T Consensus        13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~--------------   78 (377)
T 3dwl_C           13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRN--------------   78 (377)
T ss_dssp             CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSS--------------
T ss_pred             cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCe--------------
Confidence            6899999999999999999999999999988  6666666 4688999999999999999999997              


Q ss_pred             EEEEeccccc---eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        555 ARFYHLIFEE---EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       555 v~vwd~~~~~---~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      |++||+..++   .+..+.+|...|.+++|+|++++|++++.|+.|++||++.++...                      
T Consensus        79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----------------------  136 (377)
T 3dwl_C           79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW----------------------  136 (377)
T ss_dssp             EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC----------------------
T ss_pred             EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce----------------------
Confidence            8889988876   677788999999999999999999999999999999986532100                      


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (377)
T 3dwl_C          137 --------------------------------------------------------------------------------  136 (377)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecC-CCCceEEEeeCCCCCEEEEecCCCcEEEEEcc
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAG-PVDIGFKMPEPPKREKLALALADKVSERYRDR  790 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~-h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~  790 (894)
                                                              ....+.+ |...|.+++|+|++++|++++.|+.|++||+.
T Consensus       137 ----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  176 (377)
T 3dwl_C          137 ----------------------------------------VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY  176 (377)
T ss_dssp             ----------------------------------------CCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred             ----------------------------------------eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence                                                    0001223 77789999999999999999999999999985


Q ss_pred             C------------------Cceeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce----eeeccCCCC
Q psy10063        791 K------------------NKATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE----FARIKGHFG  846 (894)
Q Consensus       791 ~------------------~~~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~----l~~l~gH~~  846 (894)
                      .                  ++.+..  +...+..++|+|++++|++++.++    .|+|||+..+++    +..+.+|..
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~  252 (377)
T 3dwl_C          177 VRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS----SVTIAYPSAPEQPPRALITVKLSQL  252 (377)
T ss_dssp             CSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT----EEC-CEECSTTSCEEECCCEECSSS
T ss_pred             ecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC----cEEEEECCCCCCcceeeEeecCCCC
Confidence            2                  222332  233345778999999999999887    699999999988    888999999


Q ss_pred             CeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        847 PINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      .|.+|+|+|||++|++++.|+.+ +|+....
T Consensus       253 ~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~  282 (377)
T 3dwl_C          253 PLRSLLWANESAIVAAGYNYSPI-LLQGNES  282 (377)
T ss_dssp             CEEEEEEEETTEEEEEESSSSEE-EECCCC-
T ss_pred             ceEEEEEcCCCCEEEEEcCCcEE-EEEeCCC
Confidence            99999999999999999877766 6666533

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.96  E-value=6.1e-28  Score=275.73  Aligned_cols=267  Identities=16%  Similarity=0.146  Sum_probs=213.9

Q ss_pred             EEEEecCCCCEEEEEEccC-CCEEEEecCCCcEEEEecCC----------CeEEEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063        402 KMQVTDQSAKITSLLWGNL-DQYIITGHAKGDICTWDLRM----------GRELESISGHAKEPINDMQFSKDATMFITA  470 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spd-g~~L~sgs~Dg~I~iWd~~t----------g~~~~~l~~h~~~~V~~v~~spdg~~la~~  470 (894)
                      ...+.+|.+.|.+|+|+|+ +.+|++|+.||.|+|||+..          ++.+..+.+|..                  
T Consensus       121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~------------------  182 (430)
T 2xyi_A          121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK------------------  182 (430)
T ss_dssp             EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS------------------
T ss_pred             EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC------------------
Confidence            3567789999999999997 67999999999999999986          566777888877                  


Q ss_pred             eCCCCccceEEEEEecCCC-EEEEEECCCCEEEEEcCCCcE-------EEEEe-CCCCeeEEEEcC-CCCEEEEEECCCC
Q psy10063        471 SHSQAVEPINDMQFSKDAT-MFITASKDHTAKLFTTHDRQL-------LKTYT-TERPVNSAALSP-ILPHVVLGGGQEA  540 (894)
Q Consensus       471 ~~d~~i~~V~~l~~spdg~-~L~sgs~Dg~V~iwdl~~~~~-------~~~~~-~~~~v~~l~~sp-dg~~l~~~~~~~~  540 (894)
                             .|.+|+|+|++. +|++|+.||.|+|||+..+..       ...+. |...|.+++|+| ++.+|++++.++.
T Consensus       183 -------~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~  255 (430)
T 2xyi_A          183 -------EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK  255 (430)
T ss_dssp             -------CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred             -------CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence                   788888888887 999999999999999987422       33443 567899999999 6778888888886


Q ss_pred             eEEEeccCccceeeEEEEecccc---ceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceee
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSS  616 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~---~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~  616 (894)
                                    |++||++.+   +.+..+..|...|.+|+|+|+++ +|++|+.||.|++||++....         
T Consensus       256 --------------i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---------  312 (430)
T 2xyi_A          256 --------------LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---------  312 (430)
T ss_dssp             --------------EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---------
T ss_pred             --------------EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---------
Confidence                          889999876   57777889999999999999987 688999999999999864210         


Q ss_pred             eEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063        617 STQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE  696 (894)
Q Consensus       617 ~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  696 (894)
                                                                                                      
T Consensus       313 --------------------------------------------------------------------------------  312 (430)
T 2xyi_A          313 --------------------------------------------------------------------------------  312 (430)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCC-EE
Q psy10063        697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKRE-KL  775 (894)
Q Consensus       697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~-~L  775 (894)
                                                                             .+..+.+|...|.+|+|+|+++ +|
T Consensus       313 -------------------------------------------------------~~~~~~~h~~~v~~i~~sp~~~~~l  337 (430)
T 2xyi_A          313 -------------------------------------------------------KLHSFESHKDEIFQVQWSPHNETIL  337 (430)
T ss_dssp             -------------------------------------------------------CSEEEECCSSCEEEEEECSSCTTEE
T ss_pred             -------------------------------------------------------CeEEeecCCCCEEEEEECCCCCCEE
Confidence                                                                   0012334677899999999985 68


Q ss_pred             EEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee
Q psy10063        776 ALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       776 atgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      ++++.|+.|+|||+...........                 ..+            ...+++..+.+|...|.+++|+|
T Consensus       338 ~s~~~d~~i~iwd~~~~~~~~~~~~-----------------~~~------------~~~~~~~~~~~h~~~v~~~~~~p  388 (430)
T 2xyi_A          338 ASSGTDRRLHVWDLSKIGEEQSTED-----------------AED------------GPPELLFIHGGHTAKISDFSWNP  388 (430)
T ss_dssp             EEEETTSCCEEEEGGGTTCCCCHHH-----------------HHH------------CCTTEEEECCCCSSCEEEEEECS
T ss_pred             EEEeCCCcEEEEeCCCCccccCccc-----------------ccc------------CCcceEEEcCCCCCCceEEEECC
Confidence            9999999999999876332110000                 000            01355667789999999999999


Q ss_pred             CCc-EEEEecCCCcEEEEecCccccc
Q psy10063        856 DGK-SYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       856 dg~-~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      +++ +|++++.||.|+||++....+.
T Consensus       389 ~~~~~l~s~s~dg~i~iw~~~~~~~~  414 (430)
T 2xyi_A          389 NEPWIICSVSEDNIMQVWQMAENVYN  414 (430)
T ss_dssp             SSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred             CCCCEEEEEECCCCEEEeEccccccc
Confidence            999 8999999999999999877554

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=2.5e-27  Score=270.07  Aligned_cols=281  Identities=11%  Similarity=0.054  Sum_probs=225.7

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-----ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-----ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-----l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      ...+.+++|+|+++++++++.|+.|++||+.+++.++.     +.+|..                         .|.+++
T Consensus       122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-------------------------~v~~~~  176 (433)
T 3bws_A          122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG-------------------------FVETIS  176 (433)
T ss_dssp             SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC-------------------------EEEEEE
T ss_pred             CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC-------------------------ceeEEE
Confidence            35567999999888888888999999999999998873     345665                         788889


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCccceeeEEEEecc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      |++++.+|++++.|+.|++||++.++++..+.. ...+.+++|+|++++|++++. ++.              |++||++
T Consensus       177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------------i~~~d~~  242 (433)
T 3bws_A          177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISED--------------ISVIDRK  242 (433)
T ss_dssp             EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE--------------EEEEETT
T ss_pred             EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc--------------EEEEECC
Confidence            988999999999999999999999999988874 678999999999999987774 554              8999999


Q ss_pred             ccceEEEccCCCCCeEEEEEecCCCEEEEEe--------CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063        562 FEEEFARIKGHFGPINSLAFHPDGKSYASGG--------EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs--------~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i  633 (894)
                      .++.+..+..+ ..+.+++|+|+|++|++++        .||.|++||+..++.+.                        
T Consensus       243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~------------------------  297 (433)
T 3bws_A          243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID------------------------  297 (433)
T ss_dssp             TTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE------------------------
T ss_pred             CCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe------------------------
Confidence            99988888765 4599999999999999888        58899999986542100                        


Q ss_pred             EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063        634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN  713 (894)
Q Consensus       634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s  713 (894)
                       .                                                                              
T Consensus       298 -~------------------------------------------------------------------------------  298 (433)
T 3bws_A          298 -T------------------------------------------------------------------------------  298 (433)
T ss_dssp             -E------------------------------------------------------------------------------
T ss_pred             -e------------------------------------------------------------------------------
Confidence             0                                                                              


Q ss_pred             CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE-EEecCCCcEEEEEccCC
Q psy10063        714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL-ALALADKVSERYRDRKN  792 (894)
Q Consensus       714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L-atgs~Dg~I~iwd~~~~  792 (894)
                                                                 ..|...+.+++|+|++++| ++++.|+.|++||+..+
T Consensus       299 -------------------------------------------~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~  335 (433)
T 3bws_A          299 -------------------------------------------IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK  335 (433)
T ss_dssp             -------------------------------------------EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred             -------------------------------------------ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence                                                       0011135578899999755 56689999999999988


Q ss_pred             ceeeccc--cCCCceEeecCCCeEEEEecCCCC-----------ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063        793 KATAGFL--LSCPDFLFDFDTTREVTTTSTKVG-----------KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS  859 (894)
Q Consensus       793 ~~~~~~~--~~~~~~~fS~dg~~l~~as~d~~g-----------~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~  859 (894)
                      +.+..+.  .....++|+++|++++++..+...           +..|++||+.+++++..+.++ ..+.+++|+|||++
T Consensus       336 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~  414 (433)
T 3bws_A          336 KVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRY  414 (433)
T ss_dssp             EEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCE
T ss_pred             cEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCE
Confidence            7755443  334578899999999888764310           126999999999999888764 57899999999999


Q ss_pred             EEEec-CCCcEEEEecCc
Q psy10063        860 YASGG-EDGFVRLHTFDQ  876 (894)
Q Consensus       860 LaS~s-~Dg~V~vWdl~~  876 (894)
                      |++++ .|+.|+||++++
T Consensus       415 l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          415 LVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             EEEEETTTTEEEEEEETT
T ss_pred             EEEEECCCCeEEEEEecC
Confidence            98876 499999999874

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.96  E-value=4.8e-28  Score=271.55  Aligned_cols=260  Identities=12%  Similarity=0.018  Sum_probs=211.5

Q ss_pred             EEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEE
Q psy10063        434 CTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLK  512 (894)
Q Consensus       434 ~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~  512 (894)
                      .+|++...+.++.+.+|..                         .|.+++|+|++ ++|++|+.||.|+|||+..++...
T Consensus        56 ~~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  110 (383)
T 3ei3_B           56 FIRSLKSYKLHRTASPFDR-------------------------RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS  110 (383)
T ss_dssp             HHHHHTTCEEEEEECCCSS-------------------------CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE
T ss_pred             ccccccccceEEeccCCCC-------------------------CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce
Confidence            4566677788888888887                         78888899988 899999999999999999998888


Q ss_pred             EEe---CCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC---CCCCeEEEEEecCC
Q psy10063        513 TYT---TERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG---HFGPINSLAFHPDG  585 (894)
Q Consensus       513 ~~~---~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~---h~~~V~~l~~spdg  585 (894)
                      .+.   |...|.+++|+| ++.+|++++.++.              |++||+.. ..+..+..   |...|.+++|+|++
T Consensus       111 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~--------------i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~  175 (383)
T 3ei3_B          111 FIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA--------------TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR  175 (383)
T ss_dssp             EECCCSTTCBEEEEEEETTEEEEEEEEETTTE--------------EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred             eeecCCcCCceeEEEeCCCCCCEEEEEeCCCE--------------EEEEECCC-CceEEEeccCCCCCCeEEEEECCCC
Confidence            776   568999999999 7799999999987              88888884 55555544   44789999999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEech
Q psy10063        586 KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKD  665 (894)
Q Consensus       586 ~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~  665 (894)
                      ++|++|+.||.|++||++.. .+                                                         
T Consensus       176 ~~l~~~~~d~~i~i~d~~~~-~~---------------------------------------------------------  197 (383)
T 3ei3_B          176 QMLATGDSTGRLLLLGLDGH-EI---------------------------------------------------------  197 (383)
T ss_dssp             TEEEEEETTSEEEEEETTSC-EE---------------------------------------------------------
T ss_pred             CEEEEECCCCCEEEEECCCC-EE---------------------------------------------------------
Confidence            99999999999999998321 00                                                         


Q ss_pred             hhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcc
Q psy10063        666 EQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTP  745 (894)
Q Consensus       666 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~  745 (894)
                                                                                                      
T Consensus       198 --------------------------------------------------------------------------------  197 (383)
T 3ei3_B          198 --------------------------------------------------------------------------------  197 (383)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCcceecCCCCceEEEeeCCCCC-EEEEecCCCcEEEEEccC----Cceee--ccccCCCceEeec-CCCeEEEE
Q psy10063        746 FKLDGSDTPILAGPVDIGFKMPEPPKRE-KLALALADKVSERYRDRK----NKATA--GFLLSCPDFLFDF-DTTREVTT  817 (894)
Q Consensus       746 ~~~dg~~~~~~~~h~~~v~~la~spdg~-~Latgs~Dg~I~iwd~~~----~~~~~--~~~~~~~~~~fS~-dg~~l~~a  817 (894)
                              ..+.+|...|.+++|+|+++ +|++++.|+.|++||++.    ...+.  .+...+..++|++ ++.+++++
T Consensus       198 --------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~  269 (383)
T 3ei3_B          198 --------FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT  269 (383)
T ss_dssp             --------EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE
T ss_pred             --------EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEE
Confidence                    01234677899999999999 999999999999999987    44433  3344566788999 99999999


Q ss_pred             ecCCCCceeEEEeecCCcceeeeccCCC-----------------CCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063        818 TSTKVGKFDARFYHLIFEEEFARIKGHF-----------------GPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       818 s~d~~g~~~I~vwd~~tg~~l~~l~gH~-----------------~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      +.++    .|+|||+..++++..+.+|.                 +.+..++|+|||++  +++.||.|+|||+..++++
T Consensus       270 ~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~  343 (383)
T 3ei3_B          270 DQRN----EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV  343 (383)
T ss_dssp             ESSS----EEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE
T ss_pred             cCCC----cEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee
Confidence            9887    69999999998877776553                 23444677777776  8889999999999998887


Q ss_pred             ccccc
Q psy10063        881 YTFDI  885 (894)
Q Consensus       881 ~~~~~  885 (894)
                      ..+..
T Consensus       344 ~~l~~  348 (383)
T 3ei3_B          344 HQLRD  348 (383)
T ss_dssp             EEECB
T ss_pred             eeecC
Confidence            77653

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.5e-28  Score=300.82  Aligned_cols=258  Identities=14%  Similarity=0.209  Sum_probs=209.1

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ...+.+|.+.|.+++|+|+|++|++|+.||.|+|||+.  .++.+..+.+|.+                         .|
T Consensus         2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~-------------------------~V   56 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEG-------------------------PV   56 (753)
T ss_dssp             ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSS-------------------------CE
T ss_pred             eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcC-------------------------ce
Confidence            34678999999999999999999999999999999998  5577888999987                         78


Q ss_pred             EEEEEecC--CCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCC--CCEEEEEECCCCeEEEeccCccce
Q psy10063        480 NDMQFSKD--ATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPI--LPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       480 ~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spd--g~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .+|+|+++  +.+|++|+.||.|+|||+..++  .+..+. |...|.+++|+|+  +.+|++++.++.            
T Consensus        57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~------------  124 (753)
T 3jro_A           57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK------------  124 (753)
T ss_dssp             EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE------------
T ss_pred             EEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc------------
Confidence            88888876  8999999999999999999987  455555 5689999999999  999999999997            


Q ss_pred             eeEEEEecccc--ceEEEccCCCCCeEEEEEec-------------CCCEEEEEeCCCcEEEEECCCCccccCCCceeee
Q psy10063        553 FDARFYHLIFE--EEFARIKGHFGPINSLAFHP-------------DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSS  617 (894)
Q Consensus       553 ~~v~vwd~~~~--~~~~~l~~h~~~V~~l~~sp-------------dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~  617 (894)
                        |++||+..+  .....+.+|...|.+++|+|             ++.+|++|+.||.|++||++.+....        
T Consensus       125 --I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~--------  194 (753)
T 3jro_A          125 --VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY--------  194 (753)
T ss_dssp             --EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE--------
T ss_pred             --EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc--------
Confidence              888888776  34456678999999999999             58999999999999999985432100        


Q ss_pred             EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063        618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL  697 (894)
Q Consensus       618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  697 (894)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (753)
T 3jro_A          195 --------------------------------------------------------------------------------  194 (753)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---CCE
Q psy10063        698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---REK  774 (894)
Q Consensus       698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---g~~  774 (894)
                                                                           .....+.+|...|.+++|+|+   +.+
T Consensus       195 -----------------------------------------------------~~~~~~~~h~~~V~~l~~sp~~~~~~~  221 (753)
T 3jro_A          195 -----------------------------------------------------VLESTLEGHSDWVRDVAWSPTVLLRSY  221 (753)
T ss_dssp             -----------------------------------------------------EEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             -----------------------------------------------------eeeeeecCCCCcEEEEEeccCCCCCCE
Confidence                                                                 000123457888999999999   899


Q ss_pred             EEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEe
Q psy10063        775 LALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH  854 (894)
Q Consensus       775 Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fS  854 (894)
                      |++++.||.|++||+..++...                                      ...+....+|.+.|.+++|+
T Consensus       222 l~s~s~Dg~I~iwd~~~~~~~~--------------------------------------~~~~~~~~~~~~~v~~l~~s  263 (753)
T 3jro_A          222 LASVSQDRTCIIWTQDNEQGPW--------------------------------------KKTLLKEEKFPDVLWRASWS  263 (753)
T ss_dssp             EEEEESSSCEEEEEESSSSSCC--------------------------------------BCCBSSSSCCSSCCCCEEEC
T ss_pred             EEEEecCCEEEEecCCCCCCcc--------------------------------------eeEEeccCCCCCceEEEEEc
Confidence            9999999999999876533100                                      11223345788999999999


Q ss_pred             eCCcEEEEecCCCcEEEEecCcc
Q psy10063        855 PDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       855 pdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      |+|++|++++.||.|+||++..+
T Consensus       264 pdg~~l~s~s~Dg~I~vwd~~~~  286 (753)
T 3jro_A          264 LSGNVLALSGGDNKVTLWKENLE  286 (753)
T ss_dssp             TTTCCEEEECSSSCEECCBCCSS
T ss_pred             CCCCEEEEEcCCCEEEEEecCCC
Confidence            99999999999999999999853

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.96  E-value=7.4e-28  Score=271.66  Aligned_cols=321  Identities=13%  Similarity=0.029  Sum_probs=209.1

Q ss_pred             CEEEEEEc---cCCCEEEEecCCCcEEEEecCCC-------e---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        411 KITSLLWG---NLDQYIITGHAKGDICTWDLRMG-------R---ELESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       411 ~V~~l~~s---pdg~~L~sgs~Dg~I~iWd~~tg-------~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      ...++.|.   +++..|+.++.|+.|++|++...       .   .+..+. +.. .+..+.|++......... +   .
T Consensus        17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~-~---~   90 (393)
T 4gq1_A           17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQ-TGL-PTLHLSFSSSCSYSENLH-D---G   90 (393)
T ss_dssp             CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEE-CSS-CEEEEEECTTCEEECC--------
T ss_pred             CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEe-cCC-CeeeEeecCCcccccccc-C---C
Confidence            34555663   44444555556788999986321       1   122222 333 788888877543322111 1   1


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE--E---e-CCCCeeEEEEcC--------CCCEEEEEECCCCeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT--Y---T-TERPVNSAALSP--------ILPHVVLGGGQEAREV  543 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~--~---~-~~~~v~~l~~sp--------dg~~l~~~~~~~~~~v  543 (894)
                      .+....+++++.+|++++.|+.|+|||++.+++...  +   . |.+.|.+|+|+|        ||++|++++.|+.   
T Consensus        91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t---  167 (393)
T 4gq1_A           91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT---  167 (393)
T ss_dssp             ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE---
T ss_pred             CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe---
Confidence            344455667888999999999999999998876543  2   2 468999999998        8999999999997   


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcC
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPD  622 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spd  622 (894)
                                 |+|||+..+.++..+.+|...|.+++|+|++. +|++|+.||.|++||++.++.......         
T Consensus       168 -----------v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~---------  227 (393)
T 4gq1_A          168 -----------LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ---------  227 (393)
T ss_dssp             -----------EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------------
T ss_pred             -----------EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc---------
Confidence                       99999998888888889999999999999875 799999999999999987653211000         


Q ss_pred             CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063        623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ  702 (894)
Q Consensus       623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~  702 (894)
                                      ....          .  ....+.+                                   .... 
T Consensus       228 ----------------~~~~----------~--~~~~~s~-----------------------------------~~~~-  243 (393)
T 4gq1_A          228 ----------------TELV----------K--NPWLLTL-----------------------------------NTLP-  243 (393)
T ss_dssp             -------------------C----------S--CCCSEEE-----------------------------------ESGG-
T ss_pred             ----------------cCCc----------c--cceEEec-----------------------------------cccc-
Confidence                            0000          0  0000000                                   0000 


Q ss_pred             eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeC-CCCCEEEEecCC
Q psy10063        703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEP-PKREKLALALAD  781 (894)
Q Consensus       703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~s-pdg~~Latgs~D  781 (894)
                                                                     ........+|...+.+++|+ +|+++|++++.|
T Consensus       244 -----------------------------------------------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d  276 (393)
T 4gq1_A          244 -----------------------------------------------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKS  276 (393)
T ss_dssp             -----------------------------------------------GC------CCSSSCSEEEEETTTTCEEEEECTT
T ss_pred             -----------------------------------------------ceeeeecccccccceeeeeecCCCCEEEEEeCC
Confidence                                                           00001234577778888876 899999999999


Q ss_pred             CcEEEEEccCCceeecccc---------------------CCCceEeecC--CCeEEEEecCCCCceeEEEeecCCccee
Q psy10063        782 KVSERYRDRKNKATAGFLL---------------------SCPDFLFDFD--TTREVTTTSTKVGKFDARFYHLIFEEEF  838 (894)
Q Consensus       782 g~I~iwd~~~~~~~~~~~~---------------------~~~~~~fS~d--g~~l~~as~d~~g~~~I~vwd~~tg~~l  838 (894)
                      +.|++||+...+....+..                     .....+|++.  +.++++++.|+    .|+|||+..++++
T Consensus       277 ~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg----~V~lwd~~~~~~~  352 (393)
T 4gq1_A          277 GAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG----LIQLINTYEKDSN  352 (393)
T ss_dssp             SEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT----EEEEEETTCTTCC
T ss_pred             CCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC----EEEEEECCCCcEE
Confidence            9999999876554322210                     0112234442  23344445555    6999999999999


Q ss_pred             eeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        839 ARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       839 ~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      ..+.+|..+|.+|+|+|||++||++++|| |.||++.+
T Consensus       353 ~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g  389 (393)
T 4gq1_A          353 SIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG  389 (393)
T ss_dssp             EEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred             EEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence            99999999999999999999999999777 66777643

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.96  E-value=2.3e-27  Score=271.21  Aligned_cols=211  Identities=12%  Similarity=0.137  Sum_probs=155.3

Q ss_pred             CCccceeeeeccCccEEEecCCC-e---------------------EEEEEecCC------------CCEEEEEEccCC-
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEP-V---------------------VKMQVTDQS------------AKITSLLWGNLD-  421 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~-~---------------------~~~~l~~H~------------~~V~~l~~spdg-  421 (894)
                      ..+....++|+++|++|+.+..+ .                     +...+.+|.            +.|.+|+|+|++ 
T Consensus        27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~  106 (447)
T 3dw8_B           27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN  106 (447)
T ss_dssp             GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred             ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence            34555677899999999876542 1                     234667898            889999999998 


Q ss_pred             -CEEEEecCCCcEEEEecCCCeEEEEec---CCCC-----CCeeEE---EEcCCCCEEEEE-----eCCCCccceEEEEE
Q psy10063        422 -QYIITGHAKGDICTWDLRMGRELESIS---GHAK-----EPINDM---QFSKDATMFITA-----SHSQAVEPINDMQF  484 (894)
Q Consensus       422 -~~L~sgs~Dg~I~iWd~~tg~~~~~l~---~h~~-----~~V~~v---~~spdg~~la~~-----~~d~~i~~V~~l~~  484 (894)
                       .+|++++.|+.|+|||+..++......   .+.+     ..+..+   .+.+.+ +++..     -..++...|.+++|
T Consensus       107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD-LMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE-EEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh-eeeeccceEEeccCCCcceEEEEE
Confidence             799999999999999998765432211   1000     000000   011111 11111     02233458999999


Q ss_pred             ecCCCEEEEEECCCCEEEEEcC-CCcEEEEE--------eCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceee
Q psy10063        485 SKDATMFITASKDHTAKLFTTH-DRQLLKTY--------TTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~-~~~~~~~~--------~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      +|++++|++| .|+.|+|||++ .++++..+        .|...|.+++|+|++ .+|++++.++.              
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~--------------  250 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT--------------  250 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC--------------
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe--------------
Confidence            9999999998 89999999999 45555544        356789999999999 99999999997              


Q ss_pred             EEEEeccccce----EEEccCCCC------------CeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        555 ARFYHLIFEEE----FARIKGHFG------------PINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       555 v~vwd~~~~~~----~~~l~~h~~------------~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |++||++.++.    +..+.+|..            .|.+++|+|+|++|++++. +.|+|||++.
T Consensus       251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~  315 (447)
T 3dw8_B          251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM  315 (447)
T ss_dssp             EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred             EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence            88999988876    677888876            8999999999999999999 9999999975

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.96  E-value=2.5e-27  Score=256.51  Aligned_cols=187  Identities=18%  Similarity=0.267  Sum_probs=154.1

Q ss_pred             ccceeeeeccCccEEEecCCC-eE------------EEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCe-
Q psy10063        379 SVDRLNSMSPAARKLATNAEP-VV------------KMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGR-  442 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~-~~------------~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~-  442 (894)
                      ...+.++|++||++|+.++.+ .+            ...|.+|.+.|.+|+|++  ++++|++|+.|+.|+|||+..++ 
T Consensus        10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~   89 (297)
T 2pm7_B           10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW   89 (297)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred             CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence            344567888999988876543 22            235678999999999986  48999999999999999999874 


Q ss_pred             -EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcE--EEEE-eC
Q psy10063        443 -ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQL--LKTY-TT  516 (894)
Q Consensus       443 -~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~--~~~~-~~  516 (894)
                       .+..+.+|..                         .|.+++|+|+  |.+|++++.|+.|+|||++.+..  ...+ .|
T Consensus        90 ~~~~~~~~h~~-------------------------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h  144 (297)
T 2pm7_B           90 SQIAVHAVHSA-------------------------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH  144 (297)
T ss_dssp             CCCEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC
T ss_pred             EEEEEeecCCC-------------------------ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc
Confidence             5667777877                         6788888886  88999999999999999987632  2333 35


Q ss_pred             CCCeeEEEEcCC-------------CCEEEEEECCCCeEEEeccCccceeeEEEEeccccc----eEEEccCCCCCeEEE
Q psy10063        517 ERPVNSAALSPI-------------LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE----EFARIKGHFGPINSL  579 (894)
Q Consensus       517 ~~~v~~l~~spd-------------g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----~~~~l~~h~~~V~~l  579 (894)
                      ...|.+++|+|+             +++|++++.|+.              |++||+..++    .+..+.+|...|.+|
T Consensus       145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~--------------v~lwd~~~~~~~~~~~~~l~~H~~~V~~v  210 (297)
T 2pm7_B          145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL--------------VKIWKYNSDAQTYVLESTLEGHSDWVRDV  210 (297)
T ss_dssp             SSCEEEEEECCCC------------CCEEEEEETTSC--------------EEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred             cCccceEeecCCcccccccCCCCCCcceEEEEcCCCc--------------EEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence            688999999997             579999999997              8888887765    566788999999999


Q ss_pred             EEecCC---CEEEEEeCCCcEEEEECCC
Q psy10063        580 AFHPDG---KSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       580 ~~spdg---~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +|+|++   .+|++++.|+.|+|||++.
T Consensus       211 ~~sp~~~~~~~las~s~D~~v~iWd~~~  238 (297)
T 2pm7_B          211 AWSPTVLLRSYMASVSQDRTCIIWTQDN  238 (297)
T ss_dssp             EECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred             EECCCCCCceEEEEEECCCcEEEEEeCC
Confidence            999985   7999999999999999854

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=4.3e-26  Score=256.09  Aligned_cols=303  Identities=10%  Similarity=0.040  Sum_probs=229.3

Q ss_pred             eeccCccEEEecCC-CeEEEEEecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063        385 SMSPAARKLATNAE-PVVKMQVTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK  462 (894)
Q Consensus       385 ~~s~dg~~l~~~~~-~~~~~~l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp  462 (894)
                      .-+.|+.+.+.... ..+...+.+| ..+.+++|+|+|++| ++++.|+.|+|||+.++++++.+..+.           
T Consensus         7 s~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------   74 (391)
T 1l0q_A            7 ANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-----------   74 (391)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----------
T ss_pred             EcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-----------
Confidence            33455555544433 3444455555 459999999999977 677789999999999999998887665           


Q ss_pred             CCCEEEEEeCCCCccceEEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC-CCC
Q psy10063        463 DATMFITASHSQAVEPINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG-QEA  540 (894)
Q Consensus       463 dg~~la~~~~d~~i~~V~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~-~~~  540 (894)
                                     .+.+++|+|++++|+.+ +.++.|++||+.+++++..+.++..+.+++|+|+|++|++.+. ++.
T Consensus        75 ---------------~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  139 (391)
T 1l0q_A           75 ---------------SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT  139 (391)
T ss_dssp             ---------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred             ---------------CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCE
Confidence                           47788888888877554 4679999999999999999998889999999999998865554 553


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEE-EEEeCCCcEEEEECCCCccccCCCceeeeEE
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY-ASGGEDGFLISNTLSNGLDISEGSFTSSSTQ  619 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l-~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~  619 (894)
                                    |++||+..++.+..+..| ..+.+++|+|++++| ++++.|+.|++||++.++.+.          
T Consensus       140 --------------v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~----------  194 (391)
T 1l0q_A          140 --------------VSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID----------  194 (391)
T ss_dssp             --------------EEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----------
T ss_pred             --------------EEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE----------
Confidence                          899999999988888766 457999999999987 577788999999986542100          


Q ss_pred             CcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063        620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK  699 (894)
Q Consensus       620 spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~  699 (894)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (391)
T 1l0q_A          195 --------------------------------------------------------------------------------  194 (391)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec
Q psy10063        700 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL  779 (894)
Q Consensus       700 ~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs  779 (894)
                                                                             .+ .+...+.+++|+|++++|++++
T Consensus       195 -------------------------------------------------------~~-~~~~~~~~~~~~~~g~~l~~~~  218 (391)
T 1l0q_A          195 -------------------------------------------------------TV-KVEAAPSGIAVNPEGTKAYVTN  218 (391)
T ss_dssp             -------------------------------------------------------EE-ECSSEEEEEEECTTSSEEEEEE
T ss_pred             -------------------------------------------------------EE-ecCCCccceEECCCCCEEEEEe
Confidence                                                                   00 0122456789999999999887


Q ss_pred             ---CCCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEEe-cCCCCceeEEEeecCCcceeeeccCCCCCee---E
Q psy10063        780 ---ADKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTTT-STKVGKFDARFYHLIFEEEFARIKGHFGPIN---S  850 (894)
Q Consensus       780 ---~Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~as-~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~---~  850 (894)
                         .++.|++||+..++.+..+..+  ...++|+++|++++++. .++    .|++||+.+++++..+..|..+..   .
T Consensus       219 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~----~v~v~d~~~~~~~~~~~~~~~~~~~~~~  294 (391)
T 1l0q_A          219 VDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXN----TVSVIDTATNTITATMAVGKNPYASGQF  294 (391)
T ss_dssp             ECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEECSSSEECCSSC
T ss_pred             cCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCC----EEEEEECCCCcEEEEEECCcCCCcccee
Confidence               6899999999988776554433  34578999999986554 444    699999999999988887765432   1


Q ss_pred             EE------------EeeCC----------cEEEEecCCCcEEEEecCcccc
Q psy10063        851 LA------------FHPDG----------KSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       851 l~------------fSpdg----------~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      +.            |+.+.          ..|...+.|..+++|++..+..
T Consensus       295 ~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~  345 (391)
T 1l0q_A          295 IGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS  345 (391)
T ss_dssp             EEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred             eecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence            22            33222          3466777899999999987764

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.96  E-value=5.8e-27  Score=266.68  Aligned_cols=262  Identities=13%  Similarity=0.208  Sum_probs=198.1

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.+|...|.+|+|+|||++||+|+.||.|+|||+.++++++.+.+|..                         .|.+++
T Consensus       142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~-------------------------~v~~~s  196 (420)
T 4gga_A          142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-------------------------RVGSLS  196 (420)
T ss_dssp             ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-------------------------CEEEEE
T ss_pred             EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC-------------------------ceEEEe
Confidence            4457889999999999999999999999999999999999999999987                         566666


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCC-cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDR-QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~-~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      |  ++.+|++|+.|+.+++||.... ..+..+. |...+.++.|+++|++|++++.++.              +++|++.
T Consensus       197 ~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~--------------v~i~~~~  260 (420)
T 4gga_A          197 W--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL--------------VNVWPSA  260 (420)
T ss_dssp             E--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--------------EEEEESS
T ss_pred             e--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecccc--------------ceEEeec
Confidence            6  4679999999999999999864 4445555 4688999999999999999999997              7788877


Q ss_pred             ccc----eEEEccCCCCCeEEEEEecCCC-EEEE--EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        562 FEE----EFARIKGHFGPINSLAFHPDGK-SYAS--GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       562 ~~~----~~~~l~~h~~~V~~l~~spdg~-~l~s--gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      .++    .+..+..|...|.+++|+|++. +|++  |+.|+.|+|||+..++.+.                         
T Consensus       261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~-------------------------  315 (420)
T 4gga_A          261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS-------------------------  315 (420)
T ss_dssp             CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE-------------------------
T ss_pred             cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce-------------------------
Confidence            654    3456678999999999999765 5554  3579999999987653110                         


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                      .                                                                               
T Consensus       316 ~-------------------------------------------------------------------------------  316 (420)
T 4gga_A          316 A-------------------------------------------------------------------------------  316 (420)
T ss_dssp             E-------------------------------------------------------------------------------
T ss_pred             e-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec--CCCcEEEEEccCC
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL--ADKVSERYRDRKN  792 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs--~Dg~I~iwd~~~~  792 (894)
                                                               +. +...+.++.|++++..|++++  .|+.|+|||+.++
T Consensus       317 -----------------------------------------~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~  354 (420)
T 4gga_A          317 -----------------------------------------VD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM  354 (420)
T ss_dssp             -----------------------------------------EE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred             -----------------------------------------ec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence                                                     00 122466778889988888754  7999999999998


Q ss_pred             ceeecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeC
Q psy10063        793 KATAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       793 ~~~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd  856 (894)
                      +++..+   ...+..++|+|||++|++++.|+    .|+|||+......+..+.|...+....|..+
T Consensus       355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~----tvriWdv~~~~~~~~~~~~~~~~~~~s~~~~  417 (420)
T 4gga_A          355 AKVAELKGHTSRVLSLTMSPDGATVASAAADE----TLRLWRCFELDPARRREREKASAAKSSLIHQ  417 (420)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSCEEEEETTT----EEEEECCSCSSCC------------------
T ss_pred             cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC----eEEEEECCCCCccchhhhccCCccccccCCC
Confidence            886554   34556788999999999999998    6999999888777777777666655555443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=5.2e-28  Score=267.40  Aligned_cols=266  Identities=10%  Similarity=0.003  Sum_probs=206.1

Q ss_pred             EEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE
Q psy10063        416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS  495 (894)
Q Consensus       416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs  495 (894)
                      .+..++.+|++|+.||.|+|||+.+++.+..+.  ..                         .|.+++|+|+   |++++
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~-------------------------~v~~~~~~~~---~~s~s   92 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TP-------------------------NPRTGGEHPA---IISRG   92 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EE-------------------------CCCTTCCCCS---EEEEC
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cC-------------------------CceeeeeCCc---eEEec
Confidence            445688899999999999999999998887776  22                         4555666665   77777


Q ss_pred             CCCCEEEEEc---------CCCcEEEEEeC--CCCeeEEEEcC--CCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        496 KDHTAKLFTT---------HDRQLLKTYTT--ERPVNSAALSP--ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       496 ~Dg~V~iwdl---------~~~~~~~~~~~--~~~v~~l~~sp--dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      .|+.|++|+.         ..+++++.+..  .+.|.+++|+|  ++++|++++.++.              |++||++.
T Consensus        93 ~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~--------------i~~wd~~~  158 (343)
T 3lrv_A           93 PCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT--------------IGFQSYED  158 (343)
T ss_dssp             STTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC--------------EEEEESSS
T ss_pred             CCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc--------------EEEEECCC
Confidence            7777777754         46666666653  46799999999  9999999999997              89999999


Q ss_pred             cceEEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccC
Q psy10063        563 EEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHST  641 (894)
Q Consensus       563 ~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~  641 (894)
                      ++.+..+. .|...|.+++|+|+|.+|++|+.||.|+|||++.++.+.                                
T Consensus       159 ~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~--------------------------------  206 (343)
T 3lrv_A          159 DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS--------------------------------  206 (343)
T ss_dssp             SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC--------------------------------
T ss_pred             CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc--------------------------------
Confidence            98877664 455689999999999999999999999999987543110                                


Q ss_pred             CCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEe
Q psy10063        642 SSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHV  721 (894)
Q Consensus       642 ~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v  721 (894)
                                                                                                      
T Consensus       207 --------------------------------------------------------------------------------  206 (343)
T 3lrv_A          207 --------------------------------------------------------------------------------  206 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCccccccCCcceeeccccCcccccCCCCcceec-CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-
Q psy10063        722 NPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA-GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-  799 (894)
Q Consensus       722 ~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~-~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-  799 (894)
                                                      ..+. +|...|.+|+|+|++.+|++++ |+.|+|||++..+.+..+. 
T Consensus       207 --------------------------------~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~  253 (343)
T 3lrv_A          207 --------------------------------SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT  253 (343)
T ss_dssp             --------------------------------EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred             --------------------------------cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc
Confidence                                            0112 2777899999999999999999 4599999999887654332 


Q ss_pred             -----cCCC--ceEeecCCCeEEEEec-CCCCceeEEEeecCCcceeeeccCCCCCeeEEEEee---CCcEEEEecCCCc
Q psy10063        800 -----LSCP--DFLFDFDTTREVTTTS-TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP---DGKSYASGGEDGF  868 (894)
Q Consensus       800 -----~~~~--~~~fS~dg~~l~~as~-d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSp---dg~~LaS~s~Dg~  868 (894)
                           ..+.  .++|+++|++|+++++ ++    .|+||++..+......    .++..++|.+   +++.|++++.||.
T Consensus       254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~----~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~  325 (343)
T 3lrv_A          254 YTIPEFKTGTVTYDIDDSGKNMIAYSNESN----SLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGG  325 (343)
T ss_dssp             CBC-----CCEEEEECTTSSEEEEEETTTT----EEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTE
T ss_pred             cccccccccceEEEECCCCCEEEEecCCCC----cEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCc
Confidence                 2233  4899999999999887 65    5999999766543332    5677889998   8899999999999


Q ss_pred             EEEEecCccc
Q psy10063        869 VRLHTFDQAY  878 (894)
Q Consensus       869 V~vWdl~~~~  878 (894)
                      +++|-.....
T Consensus       326 ~~~~~~~~~~  335 (343)
T 3lrv_A          326 IAAILKTNDS  335 (343)
T ss_dssp             EEEEEECSSE
T ss_pred             eEEEEecCCe
Confidence            9998765543

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.96  E-value=3.1e-26  Score=262.62  Aligned_cols=297  Identities=13%  Similarity=0.140  Sum_probs=229.0

Q ss_pred             eeeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC
Q psy10063        384 NSMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK  452 (894)
Q Consensus       384 ~~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~  452 (894)
                      .+++++|++|+.++.           ......+.+|.+.|.+++|+  +++|++|+.||.|+|||+.+++.+..+.+|..
T Consensus       123 ~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~  200 (445)
T 2ovr_B          123 TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTS  200 (445)
T ss_dssp             EEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             EEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCC
Confidence            356667777765543           23444778999999999997  67999999999999999999999999999987


Q ss_pred             CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCE
Q psy10063        453 EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPH  531 (894)
Q Consensus       453 ~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~  531 (894)
                                               .|.+++|+  +.+|++|+.||.|++||++.++++..+.. ...|.+++|  ++.+
T Consensus       201 -------------------------~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~  251 (445)
T 2ovr_B          201 -------------------------TVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRR  251 (445)
T ss_dssp             -------------------------CEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSC
T ss_pred             -------------------------cEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCE
Confidence                                     67777774  56899999999999999999999988875 588999999  7899


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCC
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEG  611 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~  611 (894)
                      |++++.++.              |++||++.++.+..+.+|...|.+++|  ++.+|++++.||.|++||++.++.+.. 
T Consensus       252 l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~-  314 (445)
T 2ovr_B          252 VVSGAYDFM--------------VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT-  314 (445)
T ss_dssp             EEEEETTSC--------------EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE-
T ss_pred             EEEEcCCCE--------------EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEE-
Confidence            999999997              899999999999999999999999999  889999999999999999987653311 


Q ss_pred             CceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCC
Q psy10063        612 SFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDE  691 (894)
Q Consensus       612 ~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  691 (894)
                                    +..+.+.+..+..      ++..+++++  .++.|++|+..                         
T Consensus       315 --------------~~~~~~~v~~~~~------~~~~l~~~~--~dg~i~vwd~~-------------------------  347 (445)
T 2ovr_B          315 --------------LTGHQSLTSGMEL------KDNILVSGN--ADSTVKIWDIK-------------------------  347 (445)
T ss_dssp             --------------ECCCCSCEEEEEE------ETTEEEEEE--TTSCEEEEETT-------------------------
T ss_pred             --------------EcCCcccEEEEEE------eCCEEEEEe--CCCeEEEEECC-------------------------
Confidence                          0011111111211      223444444  45566665522                         


Q ss_pred             cceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee---cCCCCceEEEee
Q psy10063        692 QQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL---AGPVDIGFKMPE  768 (894)
Q Consensus       692 ~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~---~~h~~~v~~la~  768 (894)
                                                                        .+       +....+   ..|...|.+++|
T Consensus       348 --------------------------------------------------~~-------~~~~~~~~~~~~~~~v~~~~~  370 (445)
T 2ovr_B          348 --------------------------------------------------TG-------QCLQTLQGPNKHQSAVTCLQF  370 (445)
T ss_dssp             --------------------------------------------------TC-------CEEEEECSTTSCSSCEEEEEE
T ss_pred             --------------------------------------------------CC-------cEEEEEccCCCCCCCEEEEEE
Confidence                                                              11       001111   237778999999


Q ss_pred             CCCCCEEEEecCCCcEEEEEccCCceeeccc--------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCC
Q psy10063        769 PPKREKLALALADKVSERYRDRKNKATAGFL--------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF  834 (894)
Q Consensus       769 spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~--------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t  834 (894)
                      +  +.+|++|+.||.|++||+..++.+..+.        ..+..++|++++..+++++.++.....|+|||+..
T Consensus       371 ~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          371 N--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             C--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             C--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence            5  6899999999999999999988766552        23446789999999999999986555699999874

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.96  E-value=4.3e-27  Score=254.79  Aligned_cols=251  Identities=18%  Similarity=0.184  Sum_probs=207.4

Q ss_pred             CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCC
Q psy10063        441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERP  519 (894)
Q Consensus       441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~  519 (894)
                      .+.++.+.+|.+                         .|.+|+| +++++|++++.||.|+|||+..+++...+. +...
T Consensus         8 ~~~~~~l~~h~~-------------------------~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~   61 (313)
T 3odt_A            8 YQLSATLKGHDQ-------------------------DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF   61 (313)
T ss_dssp             CEEEEEECCCSS-------------------------CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSC
T ss_pred             HHHHHHhhCCCC-------------------------CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCcc
Confidence            367788889987                         7888999 889999999999999999999998887776 4689


Q ss_pred             eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc---cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy10063        520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF---EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF  596 (894)
Q Consensus       520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~---~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~  596 (894)
                      |.+++|+|++++|++++.++.              |++|++..   ++.+..+.+|...|.+++|  ++++|++++.||.
T Consensus        62 v~~~~~~~~~~~l~~~~~dg~--------------i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~  125 (313)
T 3odt_A           62 LNSVCYDSEKELLLFGGKDTM--------------INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT  125 (313)
T ss_dssp             EEEEEEETTTTEEEEEETTSC--------------EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred             EEEEEECCCCCEEEEecCCCe--------------EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC
Confidence            999999999999999999998              66666544   3567778899999999999  5789999999999


Q ss_pred             EEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhccc
Q psy10063        597 LISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMS  676 (894)
Q Consensus       597 I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~  676 (894)
                      |++||.  ++.+                                                                    
T Consensus       126 i~~~d~--~~~~--------------------------------------------------------------------  135 (313)
T 3odt_A          126 AKVWKE--GSLV--------------------------------------------------------------------  135 (313)
T ss_dssp             EEEEET--TEEE--------------------------------------------------------------------
T ss_pred             EEEEcC--CcEE--------------------------------------------------------------------
Confidence            999982  1100                                                                    


Q ss_pred             ccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee
Q psy10063        677 INHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL  756 (894)
Q Consensus       677 ~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~  756 (894)
                                                                                                   ..+
T Consensus       136 -----------------------------------------------------------------------------~~~  138 (313)
T 3odt_A          136 -----------------------------------------------------------------------------YNL  138 (313)
T ss_dssp             -----------------------------------------------------------------------------EEE
T ss_pred             -----------------------------------------------------------------------------Eec
Confidence                                                                                         012


Q ss_pred             cCCCCceEEEeeCC-CCCEEEEecCCCcEEEEEccCCceeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        757 AGPVDIGFKMPEPP-KREKLALALADKVSERYRDRKNKATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       757 ~~h~~~v~~la~sp-dg~~Latgs~Dg~I~iwd~~~~~~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      ..|...+.++++++ ++.+|++++.|+.|++||.........  +...+..++|++++. +++++.++    .|++||+.
T Consensus       139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg----~i~i~d~~  213 (313)
T 3odt_A          139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG----LIKLVDMH  213 (313)
T ss_dssp             ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS----EEEEEETT
T ss_pred             ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC----eEEEEECC
Confidence            23556678888877 899999999999999999544333222  334456788999999 78887776    69999999


Q ss_pred             CcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063        834 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       834 tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      .++++..+.+|...|.+|+|+|++ +|++++.||.|+||++..++....+...
T Consensus       214 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~  265 (313)
T 3odt_A          214 TGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP  265 (313)
T ss_dssp             TCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred             chhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc
Confidence            999999999999999999999999 5999999999999999999887776544

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.96  E-value=2.5e-27  Score=260.55  Aligned_cols=249  Identities=14%  Similarity=0.110  Sum_probs=203.2

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc----EEEEEeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccce
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ----LLKTYTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .|.+++|+|++++|++++.||.|+|||+..++    +.....+...|.+++|+|+++ +|++++.++.            
T Consensus        13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~------------   80 (342)
T 1yfq_A           13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE------------   80 (342)
T ss_dssp             CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC------------
T ss_pred             cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe------------
Confidence            79999999999999999999999999999887    666666789999999999999 9999999987            


Q ss_pred             eeEEEEec-cccceEEEccC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        553 FDARFYHL-IFEEEFARIKG--HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       553 ~~v~vwd~-~~~~~~~~l~~--h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                        |++||+ ..++. ..+.+  |...|.+++|++ +.+|++++.||.|++||++.....                     
T Consensus        81 --i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~---------------------  135 (342)
T 1yfq_A           81 --ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDG---------------------  135 (342)
T ss_dssp             --EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTB---------------------
T ss_pred             --EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccc---------------------
Confidence              888998 76654 67788  999999999999 999999999999999997431000                     


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                        .. ..                                                                         
T Consensus       136 --~~-~~-------------------------------------------------------------------------  139 (342)
T 1yfq_A          136 --VI-AV-------------------------------------------------------------------------  139 (342)
T ss_dssp             --CE-EE-------------------------------------------------------------------------
T ss_pred             --cc-cc-------------------------------------------------------------------------
Confidence              00 00                                                                         


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEc
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRD  789 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~  789 (894)
                                                             .++....+. |...|.+++|++++  |++++.|+.|++||+
T Consensus       140 ---------------------------------------~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~  177 (342)
T 1yfq_A          140 ---------------------------------------KNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRL  177 (342)
T ss_dssp             ---------------------------------------EESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEES
T ss_pred             ---------------------------------------cCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEEC
Confidence                                                   000000111 55678899999887  999999999999999


Q ss_pred             cC-Ccee-----eccccCCCceEeec-CCCeEEEEecCCCCceeEEEeecCCc------ceeeeccCCCC---------C
Q psy10063        790 RK-NKAT-----AGFLLSCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFE------EEFARIKGHFG---------P  847 (894)
Q Consensus       790 ~~-~~~~-----~~~~~~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg------~~l~~l~gH~~---------~  847 (894)
                      +. ....     ..+...+..++|++ +++++++++.++    .|+||+++.+      +.+..+.+|..         .
T Consensus       178 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
T 1yfq_A          178 PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG----RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP  253 (342)
T ss_dssp             SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS----EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred             CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC----cEEEEEEcCCCcccccccceeeeccccccccccccee
Confidence            87 4431     12233456788999 999999999887    6999999887      77888888865         9


Q ss_pred             eeEEEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        848 INSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       848 V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      |.+++|+|++++|++++.||.|+|||+..++++..+..
T Consensus       254 i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  291 (342)
T 1yfq_A          254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK  291 (342)
T ss_dssp             EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred             EEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence            99999999999999999999999999998888777653

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.96  E-value=1.7e-27  Score=272.40  Aligned_cols=188  Identities=14%  Similarity=0.131  Sum_probs=146.8

Q ss_pred             ceeeeecc-CccEEEecCC-CeEE------------EEEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEE
Q psy10063        381 DRLNSMSP-AARKLATNAE-PVVK------------MQVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELE  445 (894)
Q Consensus       381 ~~~~~~s~-dg~~l~~~~~-~~~~------------~~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~  445 (894)
                      ...++|+| ++.+|+.++. +.++            +.+.+|.+.|.+|+|+| ++.+|++|+.||.|+|||++.+....
T Consensus       122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~  201 (435)
T 4e54_B          122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV  201 (435)
T ss_dssp             EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE
T ss_pred             EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE
Confidence            44567887 4566766543 2222            24568999999999998 68899999999999999998665443


Q ss_pred             EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEE
Q psy10063        446 SISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAA  524 (894)
Q Consensus       446 ~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~  524 (894)
                      ....+.. .                      ..+.+++|++++.+|++|+.||.|+|||++.. .+..+. |...|.+++
T Consensus       202 ~~~~~~~-~----------------------~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~  257 (435)
T 4e54_B          202 FASSDTI-N----------------------IWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVA  257 (435)
T ss_dssp             EECCSSC-S----------------------CCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEE
T ss_pred             EeccCCC-C----------------------ccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeee
Confidence            3333322 1                      15788999999999999999999999999754 444444 568999999


Q ss_pred             EcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE---ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEE
Q psy10063        525 LSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR---IKGHFGPINSLAFHPDGKSYASGGEDGFLISN  600 (894)
Q Consensus       525 ~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~---l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vw  600 (894)
                      |+|++. +|++++.|+.              |++||++.++....   ..+|...|.+|+|+|+|.+|++++.||.|+||
T Consensus       258 ~~p~~~~~~~s~s~d~~--------------v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw  323 (435)
T 4e54_B          258 LNPCCDWFLATASVDQT--------------VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY  323 (435)
T ss_dssp             ECTTCSSEEEEEETTSB--------------CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred             ecCCCceEEEEecCcce--------------eeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence            999987 5667888886              78888877654433   35799999999999999999999999999999


Q ss_pred             ECCCCc
Q psy10063        601 TLSNGL  606 (894)
Q Consensus       601 dl~~~~  606 (894)
                      |+..+.
T Consensus       324 d~~~~~  329 (435)
T 4e54_B          324 SASQWD  329 (435)
T ss_dssp             ESSSSS
T ss_pred             ECCCCc
Confidence            997654

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.96  E-value=2.4e-26  Score=258.63  Aligned_cols=316  Identities=9%  Similarity=0.077  Sum_probs=197.5

Q ss_pred             CCccceeeeecc-CccEEEecCCC-eEEE-EE----------------------ecCCCCEEEEEEcc-CCCEEEEecCC
Q psy10063        377 PLSVDRLNSMSP-AARKLATNAEP-VVKM-QV----------------------TDQSAKITSLLWGN-LDQYIITGHAK  430 (894)
Q Consensus       377 ~~~~~~~~~~s~-dg~~l~~~~~~-~~~~-~l----------------------~~H~~~V~~l~~sp-dg~~L~sgs~D  430 (894)
                      +......++|+| +|++|+.+..+ .+++ .+                      .+|.+.|.+++|+| ++++|++++.|
T Consensus        42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d  121 (408)
T 4a11_B           42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD  121 (408)
T ss_dssp             CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred             cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence            445556678999 99999877543 3333 11                      24999999999999 77899999999


Q ss_pred             CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec---CCCEEEEEECCCCEEEEEcCC
Q psy10063        431 GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK---DATMFITASKDHTAKLFTTHD  507 (894)
Q Consensus       431 g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp---dg~~L~sgs~Dg~V~iwdl~~  507 (894)
                      |.|+|||+..++.+..+. +..                         .+.+++|++   ++.+|++++.||.|++||++.
T Consensus       122 ~~i~iwd~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~  175 (408)
T 4a11_B          122 KTLKVWDTNTLQTADVFN-FEE-------------------------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS  175 (408)
T ss_dssp             SEEEEEETTTTEEEEEEE-CSS-------------------------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred             CeEEEeeCCCCccceecc-CCC-------------------------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence            999999999999888887 333                         355555555   556999999999999999999


Q ss_pred             CcEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEc---------------
Q psy10063        508 RQLLKTYT-TERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARI---------------  569 (894)
Q Consensus       508 ~~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l---------------  569 (894)
                      ++++..+. +...|.+++|+|+++ .|++++.++.              |++||++.+. .+..+               
T Consensus       176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~--------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (408)
T 4a11_B          176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSR--------------VKLWDVRRASGCLITLDQHNGKKSQAVESAN  241 (408)
T ss_dssp             SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC--------------EEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred             cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc--------------EEEEECCCCCcccccccccccccceeecccc
Confidence            99988887 568899999999999 4888998887              6777776554 33333               


Q ss_pred             cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCee
Q psy10063        570 KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGV  649 (894)
Q Consensus       570 ~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i  649 (894)
                      .+|...|.+++|+|++++|++++.||.|++||+..++........... ...        .+....+..     .....+
T Consensus       242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~-----~~~~~~  307 (408)
T 4a11_B          242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCN-NSK--------KGLKFTVSC-----GCSSEF  307 (408)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCC-CCS--------SCCCCEECC-----SSSSCE
T ss_pred             ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccc-ccc--------ccceeEEec-----CCCceE
Confidence            578899999999999999999999999999999877643211000000 000        000000000     000011


Q ss_pred             eeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCcccc
Q psy10063        650 FSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS  729 (894)
Q Consensus       650 ~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~  729 (894)
                      +.++  .++.                                                                      
T Consensus       308 ~~~~--~~~~----------------------------------------------------------------------  315 (408)
T 4a11_B          308 VFVP--YGST----------------------------------------------------------------------  315 (408)
T ss_dssp             EEEE--ETTE----------------------------------------------------------------------
T ss_pred             EEEe--cCCE----------------------------------------------------------------------
Confidence            1111  1112                                                                      


Q ss_pred             ccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeec
Q psy10063        730 VDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDF  809 (894)
Q Consensus       730 ~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~  809 (894)
                           +.+|+...       +.....+.+|...|.+++|+|++.+|++++.||.|++|++...+.+...........+.+
T Consensus       316 -----i~v~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~  383 (408)
T 4a11_B          316 -----IAVYTVYS-------GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNP  383 (408)
T ss_dssp             -----EEEEETTT-------CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------
T ss_pred             -----EEEEECcC-------CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEecccccc
Confidence                 23333222       223345677899999999999999999999999999999999887766554444444555


Q ss_pred             CCCeEEEEecCCCCceeEEEeecC
Q psy10063        810 DTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       810 dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      ....+++..++..   .|++|+..
T Consensus       384 ~~~~~~~~~~~~~---~~~~W~~~  404 (408)
T 4a11_B          384 AFEDAWSSSDEEG---GTSAWSHP  404 (408)
T ss_dssp             ------------------------
T ss_pred             ccceeecccCccC---ceeecCCc
Confidence            4444444333322   58999875

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.96  E-value=4.2e-27  Score=266.00  Aligned_cols=246  Identities=15%  Similarity=0.123  Sum_probs=204.1

Q ss_pred             EEecCCCCEEEEEEcc-CCCEEEEecCCCcEEEEecCCC-------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC
Q psy10063        404 QVTDQSAKITSLLWGN-LDQYIITGHAKGDICTWDLRMG-------RELESISGHAKEPINDMQFSKDATMFITASHSQA  475 (894)
Q Consensus       404 ~l~~H~~~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg-------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~  475 (894)
                      .+.+|.+.|.+++|+| ++++|++|+.||.|+|||+..+       +.+..+.+|..                       
T Consensus        76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~-----------------------  132 (402)
T 2aq5_A           76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK-----------------------  132 (402)
T ss_dssp             CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS-----------------------
T ss_pred             eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC-----------------------
Confidence            4568999999999999 9999999999999999999988       56778888887                       


Q ss_pred             ccceEEEEEecCC-CEEEEEECCCCEEEEEcCCCcEEEEE--e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        476 VEPINDMQFSKDA-TMFITASKDHTAKLFTTHDRQLLKTY--T-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       476 i~~V~~l~~spdg-~~L~sgs~Dg~V~iwdl~~~~~~~~~--~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                        .|.+|+|+|++ .+|++++.||.|+|||++.++++..+  . |...|.+++|+|++++|++++.++.           
T Consensus       133 --~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----------  199 (402)
T 2aq5_A          133 --RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR-----------  199 (402)
T ss_dssp             --CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE-----------
T ss_pred             --eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc-----------
Confidence              78888888887 69999999999999999999999988  4 5688999999999999999999986           


Q ss_pred             eeeEEEEeccccceEEEc-cCCCCC-eEEEEEecCCCEEEEE---eCCCcEEEEECCCCccccCCCceeeeEECcCCcEE
Q psy10063        552 KFDARFYHLIFEEEFARI-KGHFGP-INSLAFHPDGKSYASG---GEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l-~~h~~~-V~~l~~spdg~~l~sg---s~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l  626 (894)
                         |++||++.++.+..+ .+|.+. +.+++|++++++|++|   +.|+.|++||++..+...                 
T Consensus       200 ---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-----------------  259 (402)
T 2aq5_A          200 ---VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-----------------  259 (402)
T ss_dssp             ---EEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-----------------
T ss_pred             ---EEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-----------------
Confidence               899999999999988 788876 8999999999999999   789999999986532100                 


Q ss_pred             EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEE
Q psy10063        627 PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMA  706 (894)
Q Consensus       627 ~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~  706 (894)
                                                        .                                             
T Consensus       260 ----------------------------------~---------------------------------------------  260 (402)
T 2aq5_A          260 ----------------------------------S---------------------------------------------  260 (402)
T ss_dssp             ----------------------------------E---------------------------------------------
T ss_pred             ----------------------------------e---------------------------------------------
Confidence                                              0                                             


Q ss_pred             eeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEE-EecCCCcEE
Q psy10063        707 RNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLA-LALADKVSE  785 (894)
Q Consensus       707 ~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~La-tgs~Dg~I~  785 (894)
                                                                     .....|...+.+++|+|++++|+ +++.|+.|+
T Consensus       261 -----------------------------------------------~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~  293 (402)
T 2aq5_A          261 -----------------------------------------------LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR  293 (402)
T ss_dssp             -----------------------------------------------EEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred             -----------------------------------------------EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence                                                           00012344578899999999997 566899999


Q ss_pred             EEEccCCce----eeccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063        786 RYRDRKNKA----TAGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE  837 (894)
Q Consensus       786 iwd~~~~~~----~~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~  837 (894)
                      +|++..++.    +..+.  ..+..++|++++.++++  +++    .+++|++..+++
T Consensus       294 i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~----~~~~~~l~~~~~  345 (402)
T 2aq5_A          294 YFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCE----IARFYKLHERKC  345 (402)
T ss_dssp             EEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTE----EEEEEEEETTEE
T ss_pred             EEEecCCCcceEeecccccCCcccceEEeccccccee--cce----eEEEEEcCCCcE
Confidence            999998772    33333  55678899999998764  333    599999987654

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.5e-26  Score=257.57  Aligned_cols=190  Identities=17%  Similarity=0.242  Sum_probs=157.9

Q ss_pred             CCccceeeeeccCccEEEecCC-Ce------------EEEEEecCCCCEEEEEEccC--CCEEEEecCCCcEEEEecCCC
Q psy10063        377 PLSVDRLNSMSPAARKLATNAE-PV------------VKMQVTDQSAKITSLLWGNL--DQYIITGHAKGDICTWDLRMG  441 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~-~~------------~~~~l~~H~~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg  441 (894)
                      +......++|++||++|+.+.. ..            ....+.+|.+.|.+|+|+++  +++|++|+.||.|+|||+..+
T Consensus        10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~   89 (379)
T 3jrp_A           10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG   89 (379)
T ss_dssp             CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred             CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence            3344556678888888877643 22            22356789999999999987  999999999999999999999


Q ss_pred             e--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcE--EEEE-
Q psy10063        442 R--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQL--LKTY-  514 (894)
Q Consensus       442 ~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~--~~~~-  514 (894)
                      +  .+..+.+|..                         .|.+++|+|+  +.+|++++.||.|+|||++.+..  ...+ 
T Consensus        90 ~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~  144 (379)
T 3jrp_A           90 RWSQIAVHAVHSA-------------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID  144 (379)
T ss_dssp             EEEEEEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE
T ss_pred             ceeEeeeecCCCc-------------------------ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec
Confidence            7  6777788877                         7888888888  89999999999999999998743  2233 


Q ss_pred             eCCCCeeEEEEcC-------------CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc----eEEEccCCCCCeE
Q psy10063        515 TTERPVNSAALSP-------------ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE----EFARIKGHFGPIN  577 (894)
Q Consensus       515 ~~~~~v~~l~~sp-------------dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----~~~~l~~h~~~V~  577 (894)
                      .+...|.+++|+|             ++.+|++++.++.              |++||++.++    .+..+.+|...|.
T Consensus       145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~--------------i~i~d~~~~~~~~~~~~~~~~h~~~v~  210 (379)
T 3jrp_A          145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL--------------VKIWKYNSDAQTYVLESTLEGHSDWVR  210 (379)
T ss_dssp             CCTTCEEEEEECCCC----------CTTCEEEEEETTSC--------------EEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred             CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCe--------------EEEEEecCCCcceeeEEEEecccCcEe
Confidence            4578999999999             6999999999997              7888877654    4567788999999


Q ss_pred             EEEEecC---CCEEEEEeCCCcEEEEECCCC
Q psy10063        578 SLAFHPD---GKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       578 ~l~~spd---g~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +++|+|+   +++|++++.||.|+|||++.+
T Consensus       211 ~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~  241 (379)
T 3jrp_A          211 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNE  241 (379)
T ss_dssp             EEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred             EEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence            9999999   899999999999999998654

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2e-27  Score=270.51  Aligned_cols=253  Identities=12%  Similarity=0.061  Sum_probs=198.3

Q ss_pred             CeeEEEEcCCCCEEEEEeCCCCc-------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCe
Q psy10063        454 PINDMQFSKDATMFITASHSQAV-------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPV  520 (894)
Q Consensus       454 ~V~~v~~spdg~~la~~~~d~~i-------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v  520 (894)
                      +|.+|+|+|||++||+++.|+.+             +.|.+++|+|+|       .++.+++|+.+.. .+..+.+...|
T Consensus        17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~~~~~~~~V   88 (588)
T 2j04_A           17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLLNSQPVCYP   88 (588)
T ss_dssp             SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSSTTSCSCCE
T ss_pred             cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEeecCCCCcE
Confidence            89999999999999999998776             578899999998       4666666654322 23333457889


Q ss_pred             eEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC-----CeEEEEEecCCCEEEEEeCCC
Q psy10063        521 NSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG-----PINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       521 ~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~-----~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      .+++|||+|++|++++.++.              |++||.+.  ++..+. |..     .|.+++|+|||++|++|+.||
T Consensus        89 ~~vawSPdG~~LAs~s~dg~--------------V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG  151 (588)
T 2j04_A           89 RVCKPSPIDDWMAVLSNNGN--------------VSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG  151 (588)
T ss_dssp             EEEEECSSSSCEEEEETTSC--------------EEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred             EEEEECCCCCEEEEEeCCCc--------------EEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence            99999999999999999997              78888543  666666 665     599999999999999999999


Q ss_pred             cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063        596 FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM  675 (894)
Q Consensus       596 ~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~  675 (894)
                      .|+||++..+..... .++                 .+..+.                                      
T Consensus       152 tVkIWd~~~~~l~~~-~~i-----------------~l~ti~--------------------------------------  175 (588)
T 2j04_A          152 ELQFFSIRKNSENTP-EFY-----------------FESSIR--------------------------------------  175 (588)
T ss_dssp             EEEEEECCCCTTTCC-CCE-----------------EEEEEE--------------------------------------
T ss_pred             EEEEEECCCCccccc-cce-----------------eeeeee--------------------------------------
Confidence            999999876421000 000                 000000                                      


Q ss_pred             cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcce
Q psy10063        676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPI  755 (894)
Q Consensus       676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~  755 (894)
                                                                                                    ..
T Consensus       176 ------------------------------------------------------------------------------~~  177 (588)
T 2j04_A          176 ------------------------------------------------------------------------------LS  177 (588)
T ss_dssp             ------------------------------------------------------------------------------CS
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          01


Q ss_pred             ecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce------ee-ccccCCCceEeecCCCeEEEEecCCCCceeEE
Q psy10063        756 LAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA------TA-GFLLSCPDFLFDFDTTREVTTTSTKVGKFDAR  828 (894)
Q Consensus       756 ~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~------~~-~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~  828 (894)
                      ..+|.++|.+++|+|||  ||+++.|+.|++|++...+.      +. .+...+.+++|+  |+.+++++ ++    .|+
T Consensus       178 ~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~----tIk  248 (588)
T 2j04_A          178 DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG----YVH  248 (588)
T ss_dssp             CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS----EEE
T ss_pred             cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC----eEE
Confidence            24578899999999999  88889999999999987773      21 344567788999  68888886 33    699


Q ss_pred             EeecCCcceeeeccCCCCCeeEEEE--eeCCcEEEEecCCCcEEEEecC
Q psy10063        829 FYHLIFEEEFARIKGHFGPINSLAF--HPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       829 vwd~~tg~~l~~l~gH~~~V~~l~f--Spdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      +||+..++......+|...|.+|+|  +||+..|+++++||. +||.++
T Consensus       249 LWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          249 KIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             EEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             EEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence            9999988774444489999999999  999999999999999 999987

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.95  E-value=5.3e-26  Score=246.98  Aligned_cols=184  Identities=16%  Similarity=0.330  Sum_probs=151.1

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------  476 (894)
                      .+.+|...|.+|+|+|+|++|++|+.||.|+|||++++++++.+.+|.. .+.+  +++++.+|++++.++.+       
T Consensus        62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~-~~~~--~~~~~~~l~s~~~~~~~~~~~~~~  138 (318)
T 4ggc_A           62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-RVGS--LSWNSYILSSGSRSGHIHHHDVRV  138 (318)
T ss_dssp             ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEE--EEEETTEEEEEETTSEEEEEETTS
T ss_pred             EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccc-eEEE--eecCCCEEEEEecCCceEeeecCC
Confidence            4457889999999999999999999999999999999999999999987 6655  45567899999887755       


Q ss_pred             ------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE----EE-EeCCCCeeEEEEcCCCCEEEE-EE--
Q psy10063        477 ------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL----KT-YTTERPVNSAALSPILPHVVL-GG--  536 (894)
Q Consensus       477 ------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~----~~-~~~~~~v~~l~~spdg~~l~~-~~--  536 (894)
                                  ..+.+++|.+++++|++++.||.|+|||++.++..    .. ..+.+.|.++++++++..++. ++  
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  218 (318)
T 4ggc_A          139 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT  218 (318)
T ss_dssp             SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred             CceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence                        57889999999999999999999999999876532    22 234678999999998775543 22  


Q ss_pred             CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe--CCCcEEEEECCCC
Q psy10063        537 GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG--EDGFLISNTLSNG  605 (894)
Q Consensus       537 ~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs--~Dg~I~vwdl~~~  605 (894)
                      .++.              |++||...+...... .|...+..+.|+++++.+++++  .|+.|+|||++.+
T Consensus       219 ~~~~--------------i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~  274 (318)
T 4ggc_A          219 SDRH--------------IRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM  274 (318)
T ss_dssp             TTCE--------------EEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred             CCCE--------------EEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC
Confidence            2332              899999888776654 5677899999999999887765  7999999998654

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.95  E-value=9.1e-27  Score=254.44  Aligned_cols=187  Identities=14%  Similarity=0.239  Sum_probs=152.2

Q ss_pred             ccceeeeeccCccEEEecCCC-e------------EEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCC--
Q psy10063        379 SVDRLNSMSPAARKLATNAEP-V------------VKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMG--  441 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~-~------------~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg--  441 (894)
                      .....++|++||++|+.++.+ .            ....+.+|.+.|.+|+|++  ++++|++|+.|+.|+|||++.+  
T Consensus        14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~   93 (316)
T 3bg1_A           14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW   93 (316)
T ss_dssp             CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred             CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence            445567888999888876543 1            2335789999999999986  4899999999999999999987  


Q ss_pred             eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcEEE---EEe-
Q psy10063        442 RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQLLK---TYT-  515 (894)
Q Consensus       442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~~~---~~~-  515 (894)
                      +.+..+.+|..                         .|.+|+|+|+  +.+|++|+.|+.|+|||++.+....   .+. 
T Consensus        94 ~~~~~~~~h~~-------------------------~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~  148 (316)
T 3bg1_A           94 EKSHEHAGHDS-------------------------SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA  148 (316)
T ss_dssp             CEEEEECCCSS-------------------------CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS
T ss_pred             eEEEEccCCCC-------------------------ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc
Confidence            45677888887                         6777777776  7899999999999999998764322   222 


Q ss_pred             CCCCeeEEEEcCC-----------------CCEEEEEECCCCeEEEeccCccceeeEEEEecccc---ceEEEccCCCCC
Q psy10063        516 TERPVNSAALSPI-----------------LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE---EEFARIKGHFGP  575 (894)
Q Consensus       516 ~~~~v~~l~~spd-----------------g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~---~~~~~l~~h~~~  575 (894)
                      |...|.+++|+|+                 +++|++++.|+.              |++||++.+   +++..+.+|...
T Consensus       149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~--------------v~lWd~~~~~~~~~~~~l~~h~~~  214 (316)
T 3bg1_A          149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNL--------------IKLWKEEEDGQWKEEQKLEAHSDW  214 (316)
T ss_dssp             SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSB--------------CCEEEECTTSCEEEEECCBCCSSC
T ss_pred             ccCCcceEEEccccCCccccccccccCccccceEEEecCCCe--------------EEEEEeCCCCccceeeecccCCCc
Confidence            4578999999998                 468999999987              778887644   466778999999


Q ss_pred             eEEEEEecCC----CEEEEEeCCCcEEEEECCC
Q psy10063        576 INSLAFHPDG----KSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       576 V~~l~~spdg----~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |.+++|+|++    .+|++++.||.|+||+++.
T Consensus       215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             EEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred             eEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence            9999999986    7899999999999999854

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.95  E-value=2.3e-26  Score=251.96  Aligned_cols=192  Identities=13%  Similarity=0.180  Sum_probs=156.6

Q ss_pred             CCCccceeeeeccCccEEEecCCC-e--------------EEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEec
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEP-V--------------VKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDL  438 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~-~--------------~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~  438 (894)
                      .+......++|+++|++|+.+..+ .              +...+.+|.+.|.+|+|+|  |+++|++|+.||.|+|||+
T Consensus         9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~   88 (351)
T 3f3f_A            9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE   88 (351)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred             ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence            334455666788888877766432 2              3335578999999999999  6999999999999999999


Q ss_pred             CCC---------eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCC
Q psy10063        439 RMG---------RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHD  507 (894)
Q Consensus       439 ~tg---------~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~  507 (894)
                      ..+         +.+..+.+|..                         .|.+++|+|+  +.+|++++.||.|+|||++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~  143 (351)
T 3f3f_A           89 DPDQEECSGRRWNKLCTLNDSKG-------------------------SLYSVKFAPAHLGLKLACLGNDGILRLYDALE  143 (351)
T ss_dssp             CTTSCTTSSCSEEEEEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred             CCCcccccccCcceeeeecccCC-------------------------ceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence            887         66777888877                         7888888888  99999999999999999998


Q ss_pred             CcEEEEE--------------eCCCCeeEEEEcCC---CCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEE
Q psy10063        508 RQLLKTY--------------TTERPVNSAALSPI---LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FAR  568 (894)
Q Consensus       508 ~~~~~~~--------------~~~~~v~~l~~spd---g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~  568 (894)
                      ++.+..+              .+...+.+++|+|+   +.+|++++.++.              +.+|+...++.  +..
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~  209 (351)
T 3f3f_A          144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA--------------IIYQRGKDGKLHVAAK  209 (351)
T ss_dssp             TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE--------------EEEEECTTSCEEEEEE
T ss_pred             hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCc--------------EEEEccCCCceeeeee
Confidence            7754332              23467999999997   899999999886              55566555554  677


Q ss_pred             ccCCCCCeEEEEEecCC----CEEEEEeCCCcEEEEECCCCc
Q psy10063        569 IKGHFGPINSLAFHPDG----KSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg----~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +.+|...|.+++|+|++    ++|++|+.||.|++||++.+.
T Consensus       210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~  251 (351)
T 3f3f_A          210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL  251 (351)
T ss_dssp             CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred             cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence            88999999999999998    899999999999999997653

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.95  E-value=5.8e-25  Score=279.10  Aligned_cols=385  Identities=9%  Similarity=0.016  Sum_probs=259.4

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCC------CcEEEEecCCCeEEEEecCCCCCCe-------eEEEEcCCCCEEE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAK------GDICTWDLRMGRELESISGHAKEPI-------NDMQFSKDATMFI  468 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~D------g~I~iWd~~tg~~~~~l~~h~~~~V-------~~v~~spdg~~la  468 (894)
                      ...+.+|...|.+++|||||++||+++.+      ..|++||+..++ .+.+..|.. .+       ..++|+|||++++
T Consensus        45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~-~~~~~~~~~~~~~~SpDg~ll~  122 (1045)
T 1k32_A           45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSG-KSTGRRMFTDVAGFDPDGNLII  122 (1045)
T ss_dssp             EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCE-EEETTEECSEEEEECTTCCEEE
T ss_pred             EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCC-cccccccccccccCCCCCEEEE
Confidence            34677899999999999999999988643      479999999887 677888876 67       8999999999666


Q ss_pred             EEeCC----C--Cc---------------cceEEEEEecCCCEEEEEEC------------CCCEEEEEcCC-CcEEEEE
Q psy10063        469 TASHS----Q--AV---------------EPINDMQFSKDATMFITASK------------DHTAKLFTTHD-RQLLKTY  514 (894)
Q Consensus       469 ~~~~d----~--~i---------------~~V~~l~~spdg~~L~sgs~------------Dg~V~iwdl~~-~~~~~~~  514 (894)
                      +++.+    +  .+               .....++|+| | +|++++.            +...+||.... ++.....
T Consensus       123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~  200 (1045)
T 1k32_A          123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV  200 (1045)
T ss_dssp             EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE
T ss_pred             EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECc
Confidence            66644    1  11               2334677999 8 8888753            33466775433 4444444


Q ss_pred             eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        515 TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       515 ~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      .|...+.+++|+++ .+++++..++.              +++|.+.. +.....+..|. .+..++|+|||++|+++. 
T Consensus       201 ~~~~~v~~~~~s~d-~l~~~~~~dg~--------------~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-  263 (1045)
T 1k32_A          201 DMSTHVSSPVIVGH-RIYFITDIDGF--------------GQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-  263 (1045)
T ss_dssp             CCSSCCEEEEEETT-EEEEEECTTSS--------------CEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-
T ss_pred             CCCCcccceEEeCC-EEEEEEeccCc--------------eEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-
Confidence            46788999999988 45555555555              45555432 34455565555 467789999999998874 


Q ss_pred             CCcEEEEECCCCccccC--------------CCceeeeEEC-cCCcEEE-ecCCeEEEEecccCCCCCCCeeeeccccCC
Q psy10063        594 DGFLISNTLSNGLDISE--------------GSFTSSSTQQ-PDGLVYP-SQGGHIHSLSSHSTSSTDTGGVFSGSRVDD  657 (894)
Q Consensus       594 Dg~I~vwdl~~~~~~~~--------------~~~v~~~~~s-pdg~~l~-~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d  657 (894)
                      ++.|++|++...+....              ...+..++|+ |+|+.++ ...+.+..+....                 
T Consensus       264 ~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~-----------------  326 (1045)
T 1k32_A          264 GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSG-----------------  326 (1045)
T ss_dssp             TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTS-----------------
T ss_pred             CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCC-----------------
Confidence            89999999844332111              1146778888 8887552 2233333332110                 


Q ss_pred             CceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce-
Q psy10063        658 SGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM-  736 (894)
Q Consensus       658 ~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~-  736 (894)
                                             +....           +.....  .....+.++ +|+.+++...+       ..+. 
T Consensus       327 -----------------------~~~~~-----------~~~~~~--~~~~~~~~s-dg~~l~~~s~~-------~~l~~  362 (1045)
T 1k32_A          327 -----------------------TYVLK-----------VPEPLR--IRYVRRGGD-TKVAFIHGTRE-------GDFLG  362 (1045)
T ss_dssp             -----------------------SBEEE-----------CSCCSC--EEEEEECSS-SEEEEEEEETT-------EEEEE
T ss_pred             -----------------------CceEE-----------ccCCCc--ceEEeeeEc-CCCeEEEEECC-------CceEE
Confidence                                   00000           000000  011123444 55555443321       1222 


Q ss_pred             eeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee---ccccCCCceEeecCCCe
Q psy10063        737 TWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA---GFLLSCPDFLFDFDTTR  813 (894)
Q Consensus       737 ~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~---~~~~~~~~~~fS~dg~~  813 (894)
                      +|+..        +.....+.+|...+.+++|+|||++||+++.++.|++||+..++...   .+...+..++|||||++
T Consensus       363 ~~d~~--------~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~  434 (1045)
T 1k32_A          363 IYDYR--------TGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF  434 (1045)
T ss_dssp             EEETT--------TCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred             EEECC--------CCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence            33222        22222333677889999999999999999999999999998877643   23344568899999999


Q ss_pred             EEEEecCC------CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        814 EVTTTSTK------VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       814 l~~as~d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      |++++.+.      .+...|++||+..++ +..+..|...+.+++|+|||++|++++.++.+++|+....
T Consensus       435 la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~  503 (1045)
T 1k32_A          435 IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL  503 (1045)
T ss_dssp             EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred             EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence            99887654      223469999999887 6778889999999999999999999999998888886533

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.95  E-value=4.1e-25  Score=259.18  Aligned_cols=325  Identities=8%  Similarity=-0.017  Sum_probs=237.5

Q ss_pred             EEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE
Q psy10063        416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS  495 (894)
Q Consensus       416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs  495 (894)
                      +|+|+++++++++.|+.|.|||..+++++..+..+.                          .+.+++|+|||++|++++
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--------------------------~~~~v~~spdg~~l~v~~  197 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--------------------------AVHISRMSASGRYLLVIG  197 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--------------------------TEEEEEECTTSCEEEEEE
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--------------------------ccceEEECCCCCEEEEEC
Confidence            489999999999999999999999999999888543                          367888899999999999


Q ss_pred             CCCCEEEEEc--CCCcEEEEEeCCCCeeEEEEcC----CCCEEEEEEC-CCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        496 KDHTAKLFTT--HDRQLLKTYTTERPVNSAALSP----ILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       496 ~Dg~V~iwdl--~~~~~~~~~~~~~~v~~l~~sp----dg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      .|+.|++||+  .+++++..+.++..+..++|+|    ||++|++++. ++.              |.+||..+++++..
T Consensus       198 ~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~--------------v~v~D~~t~~~~~~  263 (543)
T 1nir_A          198 RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ--------------FAIMDGETLEPKQI  263 (543)
T ss_dssp             TTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE--------------EEEEETTTCCEEEE
T ss_pred             CCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCe--------------EEEEecccccccee
Confidence            9999999999  8999999999888899999999    9999999985 443              88999999998887


Q ss_pred             ccCC----------C-CCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEECcCCcEEEecCC
Q psy10063        569 IKGH----------F-GPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       569 l~~h----------~-~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      +..+          . ..+.++.+++++. ++++...++.|.+||+...+.+     ..+..+..+.|+|+|+++..   
T Consensus       264 i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~v---  340 (543)
T 1nir_A          264 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMT---  340 (543)
T ss_dssp             EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEE---
T ss_pred             ecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEE---
Confidence            7642          2 3789999999776 4566778899999999875422     23455666777777664411   


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                          ++. .+..|.+|+..                                             
T Consensus       341 --------------------a~~-~~~~v~v~D~~---------------------------------------------  354 (543)
T 1nir_A          341 --------------------AAN-NSNKVAVIDSK---------------------------------------------  354 (543)
T ss_dssp             --------------------EEG-GGTEEEEEETT---------------------------------------------
T ss_pred             --------------------Eec-CCCeEEEEECC---------------------------------------------
Confidence                                100 12233333311                                             


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccc-cCCCCcceecCCCCceEEEeeCCC-CCEEEEec-CCCcEEEEE
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFK-LDGSDTPILAGPVDIGFKMPEPPK-REKLALAL-ADKVSERYR  788 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~-~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs-~Dg~I~iwd  788 (894)
                                                    .+.+.. +...    ...|.+....+ ++|+ +.+++++. .|+.|.|||
T Consensus       355 ------------------------------tg~l~~~i~~g----~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d  399 (543)
T 1nir_A          355 ------------------------------DRRLSALVDVG----KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIG  399 (543)
T ss_dssp             ------------------------------TTEEEEEEECS----SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEE
T ss_pred             ------------------------------CCeEEEeeccC----CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEE
Confidence                                          000000 0000    00133223333 4676 66667765 689999999


Q ss_pred             ccC-------Cceeecccc---CCCceEeecCCCeEEEEecCCC---CceeEEEeecCCccee-eec--------cCCCC
Q psy10063        789 DRK-------NKATAGFLL---SCPDFLFDFDTTREVTTTSTKV---GKFDARFYHLIFEEEF-ARI--------KGHFG  846 (894)
Q Consensus       789 ~~~-------~~~~~~~~~---~~~~~~fS~dg~~l~~as~d~~---g~~~I~vwd~~tg~~l-~~l--------~gH~~  846 (894)
                      ...       .+.+..+..   +...+.|+|+|++|++......   ..-.|.|||+.+++++ ..+        ..|..
T Consensus       400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~  479 (543)
T 1nir_A          400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAK  479 (543)
T ss_dssp             CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCC
T ss_pred             eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCC
Confidence            988       666665553   3356889999999999872110   0115999999998877 443        46678


Q ss_pred             CeeEEEEeeCCcEEEEe-----cCCCcEEEEecCccccccccc
Q psy10063        847 PINSLAFHPDGKSYASG-----GEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~-----s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .|..++|++||++|+++     +.|+.|.|||.++++++..++
T Consensus       480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~  522 (543)
T 1nir_A          480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK  522 (543)
T ss_dssp             EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred             ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence            89999999999988865     358999999999999988766

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.94  E-value=5.6e-25  Score=251.44  Aligned_cols=273  Identities=14%  Similarity=0.215  Sum_probs=203.8

Q ss_pred             ceeeeeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC
Q psy10063        381 DRLNSMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG  449 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~  449 (894)
                      ..+.++..||++|+.+..+           .....+.+|.+.|.+++|  ++++|++|+.||.|+|||+.+++++..+.+
T Consensus       134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~  211 (435)
T 1p22_A          134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH  211 (435)
T ss_dssp             CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC
T ss_pred             CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC
Confidence            3455666677777765432           334467899999999999  789999999999999999999999999999


Q ss_pred             CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE---EEEe-CCCCeeEEEE
Q psy10063        450 HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL---KTYT-TERPVNSAAL  525 (894)
Q Consensus       450 h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~---~~~~-~~~~v~~l~~  525 (894)
                      |..                         .|.+++|+  +.+|++|+.||.|++||++.++.+   ..+. |...|.+++|
T Consensus       212 h~~-------------------------~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  264 (435)
T 1p22_A          212 HCE-------------------------AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF  264 (435)
T ss_dssp             CCS-------------------------CEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred             CCC-------------------------cEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence            987                         67777775  458999999999999999987765   3343 4678999999


Q ss_pred             cCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        526 SPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       526 spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                        ++.+|++++.++.              |++||+..++.+..+.+|...|.+++|  ++.+|++|+.||.|++||++.+
T Consensus       265 --~~~~l~s~~~dg~--------------i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~  326 (435)
T 1p22_A          265 --DDKYIVSASGDRT--------------IKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG  326 (435)
T ss_dssp             --ETTEEEEEETTSE--------------EEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred             --CCCEEEEEeCCCe--------------EEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC
Confidence              7899999999996              899999999999999999999999999  4789999999999999998654


Q ss_pred             ccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEE
Q psy10063        606 LDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLH  685 (894)
Q Consensus       606 ~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~  685 (894)
                      +.+                                                                             
T Consensus       327 ~~~-----------------------------------------------------------------------------  329 (435)
T 1p22_A          327 ACL-----------------------------------------------------------------------------  329 (435)
T ss_dssp             CEE-----------------------------------------------------------------------------
T ss_pred             CEE-----------------------------------------------------------------------------
Confidence            211                                                                             


Q ss_pred             eeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEE
Q psy10063        686 VNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFK  765 (894)
Q Consensus       686 ~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~  765 (894)
                                                                                          ..+.+|...|.+
T Consensus       330 --------------------------------------------------------------------~~~~~h~~~v~~  341 (435)
T 1p22_A          330 --------------------------------------------------------------------RVLEGHEELVRC  341 (435)
T ss_dssp             --------------------------------------------------------------------EEECCCSSCEEE
T ss_pred             --------------------------------------------------------------------EEEeCCcCcEEE
Confidence                                                                                012346667888


Q ss_pred             EeeCCCCCEEEEecCCCcEEEEEccCCc---------eee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        766 MPEPPKREKLALALADKVSERYRDRKNK---------ATA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       766 la~spdg~~Latgs~Dg~I~iwd~~~~~---------~~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      ++|  ++.+|++|+.||.|++||+...+         .+.   .+...+..++|  ++.++++++.|+    .|+|||+.
T Consensus       342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg----~i~iwd~~  413 (435)
T 1p22_A          342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDD----TILIWDFL  413 (435)
T ss_dssp             EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSS----EEEEEC--
T ss_pred             EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCC----EEEEEECC
Confidence            888  78999999999999999987654         332   33334445556  899999998887    69999998


Q ss_pred             CcceeeeccCCCCCeeEEEEe
Q psy10063        834 FEEEFARIKGHFGPINSLAFH  854 (894)
Q Consensus       834 tg~~l~~l~gH~~~V~~l~fS  854 (894)
                      .+....... ...++.++.|.
T Consensus       414 ~~~~~~~~~-~~~~~~~~~~~  433 (435)
T 1p22_A          414 NDPAAQAEP-PRSPSRTYTYI  433 (435)
T ss_dssp             ---------------------
T ss_pred             CCCCcccCC-CCCCccceeee
Confidence            776554332 22344455554

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.94  E-value=3.2e-25  Score=245.51  Aligned_cols=259  Identities=17%  Similarity=0.131  Sum_probs=201.9

Q ss_pred             EEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC---CCEEEEEECCCCEEEEEcCC-CcE
Q psy10063        435 TWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD---ATMFITASKDHTAKLFTTHD-RQL  510 (894)
Q Consensus       435 iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd---g~~L~sgs~Dg~V~iwdl~~-~~~  510 (894)
                      .|+....+.++.+.+|.+                         .|.+|+|+|+   |++|++|+.||.|+|||++. ++.
T Consensus        23 ~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~   77 (368)
T 3mmy_A           23 TDNHNPMKDIEVTSSPDD-------------------------SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT   77 (368)
T ss_dssp             CCSSCTTCCEECSSCCSS-------------------------CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE
T ss_pred             cCCCCCcceeEeccCCCC-------------------------ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce
Confidence            345566677788888887                         7888888887   69999999999999999997 555


Q ss_pred             E-EEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEE--ecCCC
Q psy10063        511 L-KTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF--HPDGK  586 (894)
Q Consensus       511 ~-~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~--spdg~  586 (894)
                      + ..+. |...|.+++|+|++++|++++.++.              |++||+..++.+. +.+|...|.+++|  ++++.
T Consensus        78 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~  142 (368)
T 3mmy_A           78 IPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT--------------AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS  142 (368)
T ss_dssp             EEEEEEECSSCEEEEEECTTSSEEEEEETTSE--------------EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE
T ss_pred             eEEEeccccCCEEEEEECcCCCEEEEEcCCCc--------------EEEEEcCCCCcee-eccccCceEEEEEEeCCCCC
Confidence            4 4454 5789999999999999999999986              8999999888766 5679999999999  88999


Q ss_pred             EEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechh
Q psy10063        587 SYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDE  666 (894)
Q Consensus       587 ~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~  666 (894)
                      +|++++.||.|++||++.++.+.                         .+.                             
T Consensus       143 ~l~~~~~dg~i~vwd~~~~~~~~-------------------------~~~-----------------------------  168 (368)
T 3mmy_A          143 CVMTGSWDKTLKFWDTRSSNPMM-------------------------VLQ-----------------------------  168 (368)
T ss_dssp             EEEEEETTSEEEEECSSCSSCSE-------------------------EEE-----------------------------
T ss_pred             EEEEccCCCcEEEEECCCCcEEE-------------------------EEe-----------------------------
Confidence            99999999999999987643210                         000                             


Q ss_pred             hHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCccc
Q psy10063        667 QIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPF  746 (894)
Q Consensus       667 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~  746 (894)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (368)
T 3mmy_A          169 --------------------------------------------------------------------------------  168 (368)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-----cCCCceEeecCCCe----EEEE
Q psy10063        747 KLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-----LSCPDFLFDFDTTR----EVTT  817 (894)
Q Consensus       747 ~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-----~~~~~~~fS~dg~~----l~~a  817 (894)
                                 .+ ..+.++.+.  ...+++++.++.+++|++..........     .....+.+.+++..    ++++
T Consensus       169 -----------~~-~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (368)
T 3mmy_A          169 -----------LP-ERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG  234 (368)
T ss_dssp             -----------CS-SCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE
T ss_pred             -----------cC-CCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe
Confidence                       00 012233333  3477888899999999988765533222     12234455665554    8888


Q ss_pred             ecCCCCceeEEEeecCCc---ceeeeccCCCC------------CeeEEEEeeCCcEEEEecCCCcEEEEecCccccccc
Q psy10063        818 TSTKVGKFDARFYHLIFE---EEFARIKGHFG------------PINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYT  882 (894)
Q Consensus       818 s~d~~g~~~I~vwd~~tg---~~l~~l~gH~~------------~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~  882 (894)
                      +.++    .|+|||+...   +.+..+.+|..            .|.+|+|+|++++|++++.||.|+|||++.++++..
T Consensus       235 ~~dg----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~  310 (368)
T 3mmy_A          235 SIEG----RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT  310 (368)
T ss_dssp             ETTS----EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred             cCCC----cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE
Confidence            8877    6999999887   66777888876            799999999999999999999999999999888777


Q ss_pred             ccc
Q psy10063        883 FDI  885 (894)
Q Consensus       883 ~~~  885 (894)
                      +..
T Consensus       311 ~~~  313 (368)
T 3mmy_A          311 SEQ  313 (368)
T ss_dssp             CCC
T ss_pred             ecC
Confidence            653

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.5e-25  Score=255.58  Aligned_cols=239  Identities=7%  Similarity=-0.001  Sum_probs=194.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEeCC-------------------------------------
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYTTE-------------------------------------  517 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~~~-------------------------------------  517 (894)
                      ++.+|+|+++|++|+++ .++.|++||+.+|+   .+..+..+                                     
T Consensus         6 p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (450)
T 2vdu_B            6 PLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI   84 (450)
T ss_dssp             CCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred             cEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence            67889999999966655 57889999999998   66555422                                     


Q ss_pred             ------------------CCeeEEEEcCCCCEE-EEEECCCCeEEEeccCccceeeEEEEecc--ccceEEEcc--CCCC
Q psy10063        518 ------------------RPVNSAALSPILPHV-VLGGGQEAREVTTTSTKVGKFDARFYHLI--FEEEFARIK--GHFG  574 (894)
Q Consensus       518 ------------------~~v~~l~~spdg~~l-~~~~~~~~~~v~~~~~~~~~~~v~vwd~~--~~~~~~~l~--~h~~  574 (894)
                                        ..|.+++|+|+|++| ++++.++.              |++||+.  .++.+..+.  .|..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~--------------v~iwd~~~~~~~~~~~~~~~~~~~  150 (450)
T 2vdu_B           85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKS--------------LLVFDVDKTSKNVLKLRKRFCFSK  150 (450)
T ss_dssp             ---------------CCCCCEEEEEECTTSSEEEEEEGGGTE--------------EEEEEECSSSSSCEEEEEEEECSS
T ss_pred             cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCe--------------EEEEECcCCCCceeeeeecccCCC
Confidence                              159999999999997 67777776              8899998  888888776  5678


Q ss_pred             CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccc
Q psy10063        575 PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSR  654 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~  654 (894)
                      .|.+|+|+|++++|++|+.||.|++|++..++....                                            
T Consensus       151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~--------------------------------------------  186 (450)
T 2vdu_B          151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF--------------------------------------------  186 (450)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC--------------------------------------------
T ss_pred             CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc--------------------------------------------
Confidence            999999999999999999999999999865421100                                            


Q ss_pred             cCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCc
Q psy10063        655 VDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASP  734 (894)
Q Consensus       655 ~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~  734 (894)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (450)
T 2vdu_B          187 --------------------------------------------------------------------------------  186 (450)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeeccccCcccccCCCCcceecCCCCceEEEeeCCC---CCEEEEecCCCcEEEEEccCCceeeccc----cCCCceEe
Q psy10063        735 LMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK---REKLALALADKVSERYRDRKNKATAGFL----LSCPDFLF  807 (894)
Q Consensus       735 l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd---g~~Latgs~Dg~I~iwd~~~~~~~~~~~----~~~~~~~f  807 (894)
                                       ....+.+|...|.+|+|+|+   +++|++++.|+.|+|||+..++.+..+.    ..+..++|
T Consensus       187 -----------------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~  249 (450)
T 2vdu_B          187 -----------------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICC  249 (450)
T ss_dssp             -----------------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEE
T ss_pred             -----------------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEE
Confidence                             00123457778999999999   9999999999999999999887765533    34557889


Q ss_pred             ecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCC-------------------------CCCeeEEEEeeCCcEEEE
Q psy10063        808 DFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGH-------------------------FGPINSLAFHPDGKSYAS  862 (894)
Q Consensus       808 S~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH-------------------------~~~V~~l~fSpdg~~LaS  862 (894)
                      + ++++|++++.++    .|+|||+..++++..+..|                         ...|.+|+|+|++++|++
T Consensus       250 s-d~~~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~  324 (450)
T 2vdu_B          250 G-KDYLLLSAGGDD----KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF  324 (450)
T ss_dssp             C-STTEEEEEESSS----EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred             C-CCCEEEEEeCCC----eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence            9 999999999887    6999999999988777632                         357999999999999999


Q ss_pred             ec-CCCcEEEEec--Ccc
Q psy10063        863 GG-EDGFVRLHTF--DQA  877 (894)
Q Consensus       863 ~s-~Dg~V~vWdl--~~~  877 (894)
                      ++ .|+.|+||++  ..+
T Consensus       325 ~~~~d~~i~iw~~~~~~~  342 (450)
T 2vdu_B          325 FVEATKCIIILEMSEKQK  342 (450)
T ss_dssp             EETTCSEEEEEEECSSST
T ss_pred             EECCCCeEEEEEeccCCC
Confidence            88 8999999999  544

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.94  E-value=2.6e-24  Score=245.14  Aligned_cols=292  Identities=11%  Similarity=0.028  Sum_probs=221.6

Q ss_pred             EEEecCCCCEEEEE---EccCCCEEEEe--------------cCCC--cEEEEecCCC--eEEEEecCCCCCCeeEEEEc
Q psy10063        403 MQVTDQSAKITSLL---WGNLDQYIITG--------------HAKG--DICTWDLRMG--RELESISGHAKEPINDMQFS  461 (894)
Q Consensus       403 ~~l~~H~~~V~~l~---~spdg~~L~sg--------------s~Dg--~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~s  461 (894)
                      +....+...+..++   |+|+++.++..              +.++  .|.+||...+  +.+..+..+.          
T Consensus        54 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~----------  123 (433)
T 3bws_A           54 VLEMDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGF----------  123 (433)
T ss_dssp             EEEEETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS----------
T ss_pred             eeecccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCC----------
Confidence            33345667788888   88887766543              2233  3444444334  4555555443          


Q ss_pred             CCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe------CCCCeeEEEEcCCCCEEEEE
Q psy10063        462 KDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT------TERPVNSAALSPILPHVVLG  535 (894)
Q Consensus       462 pdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~------~~~~v~~l~~spdg~~l~~~  535 (894)
                                      .+.+++|+|++.++++++.|+.|++||+.+++++..+.      +...|.+++|++++++++++
T Consensus       124 ----------------~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~  187 (433)
T 3bws_A          124 ----------------QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ  187 (433)
T ss_dssp             ----------------CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE
T ss_pred             ----------------CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEE
Confidence                            35688888877778888888999999999999887443      34689999999999999998


Q ss_pred             ECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCccccCCCce
Q psy10063        536 GGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGLDISEGSFT  614 (894)
Q Consensus       536 ~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~~~~~~~~v  614 (894)
                      +.++.              |++||++.++.+..+..|...+.+++|++++++|+++ +.|+.|++||++.++.+.     
T Consensus       188 ~~d~~--------------v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-----  248 (433)
T 3bws_A          188 MQANA--------------VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-----  248 (433)
T ss_dssp             GGGTE--------------EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-----
T ss_pred             CCCCE--------------EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-----
Confidence            88876              8999999999999999999999999999999988554 479999999986542110     


Q ss_pred             eeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcce
Q psy10063        615 SSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS  694 (894)
Q Consensus       615 ~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  694 (894)
                                                                                                      
T Consensus       249 --------------------------------------------------------------------------------  248 (433)
T 3bws_A          249 --------------------------------------------------------------------------------  248 (433)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCE
Q psy10063        695 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREK  774 (894)
Q Consensus       695 ~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~  774 (894)
                                                                                  .+. +...+.+++|+|++++
T Consensus       249 ------------------------------------------------------------~~~-~~~~~~~~~~~~~g~~  267 (433)
T 3bws_A          249 ------------------------------------------------------------KTD-KIGLPRGLLLSKDGKE  267 (433)
T ss_dssp             ------------------------------------------------------------ECC-CCSEEEEEEECTTSSE
T ss_pred             ------------------------------------------------------------Eec-CCCCceEEEEcCCCCE
Confidence                                                                        000 0122568889999999


Q ss_pred             EEEec--------CCCcEEEEEccCCceeecc--ccCCCceEeecCCCeEEEE-ecCCCCceeEEEeecCCcceeeeccC
Q psy10063        775 LALAL--------ADKVSERYRDRKNKATAGF--LLSCPDFLFDFDTTREVTT-TSTKVGKFDARFYHLIFEEEFARIKG  843 (894)
Q Consensus       775 Latgs--------~Dg~I~iwd~~~~~~~~~~--~~~~~~~~fS~dg~~l~~a-s~d~~g~~~I~vwd~~tg~~l~~l~g  843 (894)
                      |++++        .|+.|++||+..++.+...  ......++|++++++++++ ..++    .|++||+..++++..+. 
T Consensus       268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~----~v~v~d~~~~~~~~~~~-  342 (433)
T 3bws_A          268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS----KIEVYDLKEKKVQKSIP-  342 (433)
T ss_dssp             EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT----EEEEEETTTTEEEEEEE-
T ss_pred             EEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC----EEEEEECCCCcEEEEec-
Confidence            98887        5889999999888765544  3345578899999877666 4444    69999999998887775 


Q ss_pred             CCCCeeEEEEeeCCcEEEEecC---------------CCcEEEEecCcccccccccc
Q psy10063        844 HFGPINSLAFHPDGKSYASGGE---------------DGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       844 H~~~V~~l~fSpdg~~LaS~s~---------------Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      |...+.+++|+|||++|++++.               ||.|++||+..++.+..+..
T Consensus       343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~  399 (433)
T 3bws_A          343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA  399 (433)
T ss_dssp             CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC
T ss_pred             CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC
Confidence            6788999999999998888776               67999999998887776654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3.6e-25  Score=270.95  Aligned_cols=189  Identities=17%  Similarity=0.244  Sum_probs=157.5

Q ss_pred             CccceeeeeccCccEEEecCCC-------------eEEEEEecCCCCEEEEEEccC--CCEEEEecCCCcEEEEecCCCe
Q psy10063        378 LSVDRLNSMSPAARKLATNAEP-------------VVKMQVTDQSAKITSLLWGNL--DQYIITGHAKGDICTWDLRMGR  442 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~-------------~~~~~l~~H~~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg~  442 (894)
                      ......++|+++|++|+.++.+             .....+.+|.+.|.+++|+++  +++|++|+.||.|+|||+..++
T Consensus         9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~   88 (753)
T 3jro_A            9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR   88 (753)
T ss_dssp             CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred             cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence            3445556777777777665432             223366789999999999998  9999999999999999999987


Q ss_pred             --EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcE---EEEEe
Q psy10063        443 --ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQL---LKTYT  515 (894)
Q Consensus       443 --~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~---~~~~~  515 (894)
                        .+..+.+|..                         .|.+++|+|+  +.+|++|+.||.|+|||++.+..   .....
T Consensus        89 ~~~~~~~~~h~~-------------------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~  143 (753)
T 3jro_A           89 WSQIAVHAVHSA-------------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA  143 (753)
T ss_dssp             EEEEEEECCCSS-------------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred             ccccccccCCCC-------------------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence              6777888887                         7888888888  99999999999999999988732   23334


Q ss_pred             CCCCeeEEEEcC-------------CCCEEEEEECCCCeEEEeccCccceeeEEEEecccc----ceEEEccCCCCCeEE
Q psy10063        516 TERPVNSAALSP-------------ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE----EEFARIKGHFGPINS  578 (894)
Q Consensus       516 ~~~~v~~l~~sp-------------dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~----~~~~~l~~h~~~V~~  578 (894)
                      +...|.+++|+|             ++.+|++++.++.              |++||++.+    ..+..+.+|...|.+
T Consensus       144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~--------------I~iwd~~~~~~~~~~~~~~~~h~~~V~~  209 (753)
T 3jro_A          144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL--------------VKIWKYNSDAQTYVLESTLEGHSDWVRD  209 (753)
T ss_dssp             CSSCEEEEEECCCC---------CGGGCCEEEEETTSC--------------EEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred             CCCceEEEEecCcccccccccccCCCCCEEEEEECCCe--------------EEEEeccCCcccceeeeeecCCCCcEEE
Confidence            578999999999             5899999999997              788888766    556678899999999


Q ss_pred             EEEecC---CCEEEEEeCCCcEEEEECCCC
Q psy10063        579 LAFHPD---GKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       579 l~~spd---g~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ++|+|+   +.+|++|+.||.|++||+..+
T Consensus       210 l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~  239 (753)
T 3jro_A          210 VAWSPTVLLRSYLASVSQDRTCIIWTQDNE  239 (753)
T ss_dssp             EEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred             EEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence            999999   899999999999999998654

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.94  E-value=1.1e-24  Score=242.22  Aligned_cols=182  Identities=12%  Similarity=0.136  Sum_probs=137.7

Q ss_pred             CCccceeeeeccCccEEEecCCCeEEE--------EEecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEe
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEPVVKM--------QVTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESI  447 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~--------~l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l  447 (894)
                      +......++|++||++|+.+..+.+++        .+..+...+..++|.++++++ ++|+.|+.|+|||+.+++++..+
T Consensus        18 h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~   97 (355)
T 3vu4_A           18 VSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI   97 (355)
T ss_dssp             -CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred             CCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence            344566779999999999888765443        122233468889999988877 56788899999999999999988


Q ss_pred             cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCC-cEEEEEeCCCCeeEEEEc
Q psy10063        448 SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDR-QLLKTYTTERPVNSAALS  526 (894)
Q Consensus       448 ~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~-~~~~~~~~~~~v~~l~~s  526 (894)
                      .. ..                         .|.+++|++++  ++++ .|+.|+|||+..+ +++..+..  ....++++
T Consensus        98 ~~-~~-------------------------~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s  146 (355)
T 3vu4_A           98 KV-DA-------------------------PVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFS  146 (355)
T ss_dssp             EC-SS-------------------------CEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEE
T ss_pred             EC-CC-------------------------ceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEE
Confidence            74 34                         46666666543  3433 4789999999988 66665554  45566777


Q ss_pred             CCCCEEEEE--ECCCCeEEEeccCccceeeEEEEeccccc----------------eEEEccCCCCCeEEEEEecCCCEE
Q psy10063        527 PILPHVVLG--GGQEAREVTTTSTKVGKFDARFYHLIFEE----------------EFARIKGHFGPINSLAFHPDGKSY  588 (894)
Q Consensus       527 pdg~~l~~~--~~~~~~~v~~~~~~~~~~~v~vwd~~~~~----------------~~~~l~~h~~~V~~l~~spdg~~l  588 (894)
                      +  .+|+++  +.++.              |++||+..++                ++..+.+|.+.|.+++|+|+|++|
T Consensus       147 ~--~~la~~sg~~~g~--------------v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l  210 (355)
T 3vu4_A          147 N--GLLVYSNEFNLGQ--------------IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV  210 (355)
T ss_dssp             T--TEEEEEESSCTTC--------------EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE
T ss_pred             c--cEEEEeCCCcCcE--------------EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE
Confidence            7  677775  55565              8888888765                267789999999999999999999


Q ss_pred             EEEeCCCc-EEEEECCCC
Q psy10063        589 ASGGEDGF-LISNTLSNG  605 (894)
Q Consensus       589 ~sgs~Dg~-I~vwdl~~~  605 (894)
                      ++|+.||. |+|||++.+
T Consensus       211 ~s~s~d~~~v~iwd~~~~  228 (355)
T 3vu4_A          211 ATCSQDGTIIRVFKTEDG  228 (355)
T ss_dssp             EEEETTCSEEEEEETTTC
T ss_pred             EEEeCCCCEEEEEECCCC
Confidence            99999998 999998754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.9e-25  Score=246.84  Aligned_cols=238  Identities=11%  Similarity=0.022  Sum_probs=190.4

Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +..++.+|++|+.||.|+|||+.+++++..+. ...|.+++|+|+   |++++.|+.+++|.....     +.+|++..+
T Consensus        44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~-----~~~~~~~~~  114 (343)
T 3lrv_A           44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQ-----ITILDSKTN  114 (343)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTE-----EEEEETTTC
T ss_pred             hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCc-----eEEeecCCc
Confidence            34578899999999999999999999988877 456788889988   999999999999987753     788999988


Q ss_pred             ceEEEcc-CCCCCeEEEEEec--CCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        564 EEFARIK-GHFGPINSLAFHP--DGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       564 ~~~~~l~-~h~~~V~~l~~sp--dg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      +.++.+. +|.+.|.+++|+|  ++++|++++.||.|++||++.++.+.                          +    
T Consensus       115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~--------------------------~----  164 (343)
T 3lrv_A          115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI--------------------------V----  164 (343)
T ss_dssp             CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE--------------------------E----
T ss_pred             ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE--------------------------E----
Confidence            8776665 7888999999999  99999999999999999986542100                          0    


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (343)
T 3lrv_A          165 --------------------------------------------------------------------------------  164 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee-ecc-
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT-AGF-  798 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~-~~~-  798 (894)
                                                        ....|...+.+++|+|++.+||+|+.||.|+|||++.++.+ ..+ 
T Consensus       165 ----------------------------------~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~  210 (343)
T 3lrv_A          165 ----------------------------------HSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP  210 (343)
T ss_dssp             ----------------------------------ECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred             ----------------------------------EecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence                                              00112334779999999999999999999999999988765 333 


Q ss_pred             ---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC---CCCCee--EEEEeeCCcEEEEecC-CCcE
Q psy10063        799 ---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG---HFGPIN--SLAFHPDGKSYASGGE-DGFV  869 (894)
Q Consensus       799 ---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g---H~~~V~--~l~fSpdg~~LaS~s~-Dg~V  869 (894)
                         ...+..++|+++|.+|++++.+     .|+|||++.++++..+..   |...+.  +++|+|+|++|++++. |+.|
T Consensus       211 ~~h~~~v~~l~fs~~g~~l~s~~~~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i  285 (343)
T 3lrv_A          211 VDEEAKIKEVKFADNGYWMVVECDQ-----TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSL  285 (343)
T ss_dssp             CCTTSCEEEEEECTTSSEEEEEESS-----BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEE
T ss_pred             ccCCCCEEEEEEeCCCCEEEEEeCC-----eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcE
Confidence               3445578899999999999844     499999999887766554   555555  5999999999999888 9999


Q ss_pred             EEEecCcccc
Q psy10063        870 RLHTFDQAYF  879 (894)
Q Consensus       870 ~vWdl~~~~~  879 (894)
                      +||+++....
T Consensus       286 ~v~~~~~~~~  295 (343)
T 3lrv_A          286 TIYKFDKKTK  295 (343)
T ss_dssp             EEEEECTTTC
T ss_pred             EEEEEccccc
Confidence            9999976543

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.93  E-value=4.9e-25  Score=248.52  Aligned_cols=162  Identities=13%  Similarity=0.167  Sum_probs=116.7

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE-----EecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE-----SISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~-----~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      .|...+....+++++.+|++|+.|++|+|||+..+++..     .+.+|.+                         .|.+
T Consensus        87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~-------------------------~v~~  141 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN-------------------------FVND  141 (393)
T ss_dssp             ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS-------------------------CEEE
T ss_pred             ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC-------------------------ceEE
Confidence            455555556666778899999999999999999887543     3567887                         4555


Q ss_pred             EEEec--------CCCEEEEEECCCCEEEEEcCCCcEE-EEEeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccc
Q psy10063        482 MQFSK--------DATMFITASKDHTAKLFTTHDRQLL-KTYTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       482 l~~sp--------dg~~L~sgs~Dg~V~iwdl~~~~~~-~~~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      |+|+|        |+++||+|+.|++|+|||++.+.++ ..+.++..|.+++|+|++. +|++++.++.           
T Consensus       142 v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~-----------  210 (393)
T 4gq1_A          142 IDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN-----------  210 (393)
T ss_dssp             EEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE-----------
T ss_pred             EEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE-----------
Confidence            55554        7899999999999999999877655 4556789999999999985 7888999998           


Q ss_pred             eeeEEEEeccccceE-------------------------EEccCCCCCeEEEEEe-cCCCEEEEEeCCCcEEEEECCCC
Q psy10063        552 KFDARFYHLIFEEEF-------------------------ARIKGHFGPINSLAFH-PDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~-------------------------~~l~~h~~~V~~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                         |++||++.++..                         ....+|...|.+++|+ +||++|++++.|+.+++||+..+
T Consensus       211 ---v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~  287 (393)
T 4gq1_A          211 ---IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN  287 (393)
T ss_dssp             ---EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred             ---EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence               555555444322                         1234788899999997 79999999999999999999876


Q ss_pred             cc
Q psy10063        606 LD  607 (894)
Q Consensus       606 ~~  607 (894)
                      +.
T Consensus       288 ~~  289 (393)
T 4gq1_A          288 ND  289 (393)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.93  E-value=5.6e-25  Score=249.89  Aligned_cols=300  Identities=14%  Similarity=0.072  Sum_probs=212.1

Q ss_pred             CCCCEEEEEEccCCC-EEEEec----CCC----cEEEEec--CCCeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        408 QSAKITSLLWGNLDQ-YIITGH----AKG----DICTWDL--RMGREL--ESISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       408 H~~~V~~l~~spdg~-~L~sgs----~Dg----~I~iWd~--~tg~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      +...|...+|.+.|. +|++|+    .||    .|+|||+  .+++++  ..+.+|.. .+..+++++....+.      
T Consensus        61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~------  133 (415)
T 2hqs_A           61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQ-WLRYAGHTASDEVFE------  133 (415)
T ss_dssp             SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGG-GHHHHHHHHHHHHHH------
T ss_pred             cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChh-HHHHHHHHHHHHHHH------
Confidence            345778888988876 555765    467    8999999  999887  45778876 444444432100000      


Q ss_pred             CccceEEEEEecCCCEEEEEECC------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        475 AVEPINDMQFSKDATMFITASKD------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       475 ~i~~V~~l~~spdg~~L~sgs~D------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                         .... ...+.+.+|+.++.+      +.|++||+..+.+.....+...+.+++|+|||++|++++.++.        
T Consensus       134 ---~~~g-~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~--------  201 (415)
T 2hqs_A          134 ---KLTG-IKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG--------  201 (415)
T ss_dssp             ---HHHS-SCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTS--------
T ss_pred             ---HHcC-CCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCC--------
Confidence               0000 000125556665544      7899999986555555557789999999999999999997752        


Q ss_pred             ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEE-EEeCCCc--EEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063        549 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA-SGGEDGF--LISNTLSNGLDISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       549 ~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~-sgs~Dg~--I~vwdl~~~~~~~~~~~v~~~~~spdg~~  625 (894)
                         ...|++||+..++.. .+..|...+.+++|+|||++|+ +++.|+.  |++||++.++..                 
T Consensus       202 ---~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-----------------  260 (415)
T 2hqs_A          202 ---RSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-----------------  260 (415)
T ss_dssp             ---SCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----------------
T ss_pred             ---CcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-----------------
Confidence               113899999988775 5667888999999999999888 6666655  888887543200                 


Q ss_pred             EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063        626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM  705 (894)
Q Consensus       626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~  705 (894)
                                                                                                      
T Consensus       261 --------------------------------------------------------------------------------  260 (415)
T 2hqs_A          261 --------------------------------------------------------------------------------  260 (415)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CC--
Q psy10063        706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DK--  782 (894)
Q Consensus       706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg--  782 (894)
                                                                       .+..|...+.+++|+|||++|++++. ++  
T Consensus       261 -------------------------------------------------~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~  291 (415)
T 2hqs_A          261 -------------------------------------------------QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRP  291 (415)
T ss_dssp             -------------------------------------------------ECCCCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred             -------------------------------------------------eCcCCCCcccceEECCCCCEEEEEECCCCCc
Confidence                                                             11123445778999999999998776 45  


Q ss_pred             cEEEEEccCCceeec--cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEE
Q psy10063        783 VSERYRDRKNKATAG--FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY  860 (894)
Q Consensus       783 ~I~iwd~~~~~~~~~--~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~L  860 (894)
                      .|++||+..++...-  .......++|+|||++|++++.+. +...|++||+.++++. .+..|. .+.+++|+|||++|
T Consensus       292 ~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l  368 (415)
T 2hqs_A          292 QVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMV  368 (415)
T ss_dssp             EEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEE
T ss_pred             EEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEE
Confidence            577778877664321  112234678999999999888753 3447999999988774 566664 89999999999999


Q ss_pred             EEecCCC---cEEEEecCcccc
Q psy10063        861 ASGGEDG---FVRLHTFDQAYF  879 (894)
Q Consensus       861 aS~s~Dg---~V~vWdl~~~~~  879 (894)
                      ++++.|+   .|++|+++++..
T Consensus       369 ~~~s~~~~~~~l~~~d~~g~~~  390 (415)
T 2hqs_A          369 IYSSSQGMGSVLNLVSTDGRFK  390 (415)
T ss_dssp             EEEEEETTEEEEEEEETTSCCE
T ss_pred             EEEEcCCCccEEEEEECCCCcE
Confidence            9988887   799999986543

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.93  E-value=1.3e-24  Score=232.94  Aligned_cols=189  Identities=14%  Similarity=0.056  Sum_probs=144.0

Q ss_pred             CCCEEEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        409 SAKITSLLWGNL----DQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       409 ~~~V~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      ...|.+|+|+||    ++++++++.+  ++||++..|+.+.. +.+|.+ .|..++|+|+|+.++......  ..+..++
T Consensus       111 ~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~-~V~~~~~s~dG~~~~s~~~~~--~~v~~l~  185 (356)
T 2w18_A          111 IREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQ-QVEVMTFAEDGGGKENQFLMP--PEETILT  185 (356)
T ss_dssp             EEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTC-EEEEEEECTTSCEEEEEEECC--CSSCEEE
T ss_pred             ccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCC-cEEEEEECCCCceeeeeccCC--CceeeEE
Confidence            347788888899    8899998854  89999999999888 578888 999999999999888644322  2577788


Q ss_pred             Eec---CCCEEEEEECCCCEEEEEcCCCcEEEEEeC-C---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        484 FSK---DATMFITASKDHTAKLFTTHDRQLLKTYTT-E---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       484 ~sp---dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      |++   ++.+|++++.|++|+|||+++|++++.+.. +   ..+.+++|+|+|+++++++.+..  +|.+........|+
T Consensus       186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~laSGs~D~tIk  263 (356)
T 2w18_A          186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KESESLRSPVFQLI  263 (356)
T ss_dssp             EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------------CCEEEE
T ss_pred             eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cceeeccCCCcEEE
Confidence            888   789999999999999999999999999974 2   35778899999999988775433  35555555556699


Q ss_pred             EEeccccceEEEc-----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        557 FYHLIFEEEFARI-----KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       557 vwd~~~~~~~~~l-----~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      +||..+++.+..+     .+|...+.+..++  +.++++++.|+.|+|||+..++
T Consensus       264 lWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk  316 (356)
T 2w18_A          264 VINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQ  316 (356)
T ss_dssp             EEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCS
T ss_pred             EEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCc
Confidence            9999999988765     4777766555554  8899999999999999997654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.93  E-value=8.3e-24  Score=268.48  Aligned_cols=396  Identities=12%  Similarity=0.032  Sum_probs=262.0

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC----C--Cc-----
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS----Q--AV-----  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d----~--~i-----  476 (894)
                      |.+.+.+++||+  ++|++++. +.|++|++..++ .+.+..|.. .|.+++|||||++||+++.+    +  .+     
T Consensus        13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~-~~~lt~~~~-~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~   87 (1045)
T 1k32_A           13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGS-TRKIVSNLG-VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG   87 (1045)
T ss_dssp             CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCC-EEEEECSSS-EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET
T ss_pred             ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCc-EEEeeeCCC-cccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC
Confidence            567899999995  57888765 689999998776 456677887 89999999999999988654    2  12     


Q ss_pred             ------------cce-------EEEEEecCCCEEEEEECC------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCE
Q psy10063        477 ------------EPI-------NDMQFSKDATMFITASKD------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPH  531 (894)
Q Consensus       477 ------------~~V-------~~l~~spdg~~L~sgs~D------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~  531 (894)
                                  ..+       .+++|+|||++|++++.+      ..|++||+..+++.....+  ....++|+| | +
T Consensus        88 ~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~~~~~~~sp-G-~  163 (1045)
T 1k32_A           88 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLG--PATHILFAD-G-R  163 (1045)
T ss_dssp             TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSC--SCSEEEEET-T-E
T ss_pred             CCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCC--CcceeeeCC-C-E
Confidence                        245       889999999977777654      3588888887776543333  345678999 8 7


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC--Cc--c
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN--GL--D  607 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~--~~--~  607 (894)
                      +++++.+.....|........  .++|....+.....+.+|...+.+++|+++ +++++++.|+.++||.++.  +.  .
T Consensus       164 l~~~~~~~~~~~~~~~~g~~~--~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~  240 (1045)
T 1k32_A          164 RVIGRNTFELPHWKGYRGGTR--GKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRK  240 (1045)
T ss_dssp             EEEEESCSCCTTSTTCCSTTC--CEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEE
T ss_pred             EEEeccCCCccccccccCCCc--CCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceE
Confidence            777764433222222111111  445543333555666899999999999988 6777788889999997653  22  2


Q ss_pred             ccCCCceeeeEECcCCcEE-EecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEe
Q psy10063        608 ISEGSFTSSSTQQPDGLVY-PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHV  686 (894)
Q Consensus       608 ~~~~~~v~~~~~spdg~~l-~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~  686 (894)
                      +.....+...+|+|+|..+ ...++.+..|..      ....+..                         +....     
T Consensus       241 l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~------~~~~l~~-------------------------l~~~~-----  284 (1045)
T 1k32_A          241 HTSFTDYYPRHLNTDGRRILFSKGGSIYIFNP------DTEKIEK-------------------------IEIGD-----  284 (1045)
T ss_dssp             CCCCCSSCEEEEEESSSCEEEEETTEEEEECT------TTCCEEE-------------------------CCCCC-----
T ss_pred             ecCCCCcceeeEcCCCCEEEEEeCCEEEEecC------CceEeee-------------------------eccCc-----
Confidence            2222334556788888754 333333333332      0000000                         00000     


Q ss_pred             eccCCcceeEeccCcceeEEeeeEEEc-CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCC-ceE
Q psy10063        687 NPFDEQQSVELTKDEQIEMARNRMSIN-HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVD-IGF  764 (894)
Q Consensus       687 ~~~~~~~~~~~s~~~~~~~~~~~~~~s-~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~-~v~  764 (894)
                         .........    .......+.++ ++|+.+++..        ...+.+|....+.        ...+..|.. .+.
T Consensus       285 ---~~~~~~~~~----~~~~v~~~~~S~pdG~~la~~~--------~~~i~~~~~~~~~--------~~~~~~~~~~~~~  341 (1045)
T 1k32_A          285 ---LESPEDRII----SIPSKFAEDFSPLDGDLIAFVS--------RGQAFIQDVSGTY--------VLKVPEPLRIRYV  341 (1045)
T ss_dssp             ---CCBCCSEEE----ECGGGGEEEEEECGGGCEEEEE--------TTEEEEECTTSSB--------EEECSCCSCEEEE
T ss_pred             ---ccccccccc----cccccceeeecCCCCCEEEEEE--------cCEEEEEcCCCCc--------eEEccCCCcceEE
Confidence               000000000    00012346677 7777776644        1224444332222        223445666 789


Q ss_pred             EEeeCCCCCEEEEecCCCcEE-EEEccCCceee--ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec
Q psy10063        765 KMPEPPKREKLALALADKVSE-RYRDRKNKATA--GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI  841 (894)
Q Consensus       765 ~la~spdg~~Latgs~Dg~I~-iwd~~~~~~~~--~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l  841 (894)
                      +++|+ ||+.|+.++.+..|. +|++..++...  .+...+..++|+|||++|++++.++    .|++||+.++++...+
T Consensus       342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~----~v~~~d~~tg~~~~~~  416 (1045)
T 1k32_A          342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRF----EIMTVDLETGKPTVIE  416 (1045)
T ss_dssp             EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEE
T ss_pred             eeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCC----eEEEEECCCCceEEec
Confidence            99999 999999988888888 89987765432  2223345788999999999988776    6999999999988888


Q ss_pred             cCCCCCeeEEEEeeCCcEEEEecCCC----------cEEEEecCcccc
Q psy10063        842 KGHFGPINSLAFHPDGKSYASGGEDG----------FVRLHTFDQAYF  879 (894)
Q Consensus       842 ~gH~~~V~~l~fSpdg~~LaS~s~Dg----------~V~vWdl~~~~~  879 (894)
                      .+|.+.|.+++|||||++|++++.++          .|+||++..++.
T Consensus       417 ~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~  464 (1045)
T 1k32_A          417 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI  464 (1045)
T ss_dssp             ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred             cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence            89999999999999999999887654          899999987763

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.93  E-value=3.2e-24  Score=262.32  Aligned_cols=340  Identities=11%  Similarity=0.063  Sum_probs=218.4

Q ss_pred             CCCEEEEEEccCCCEEEEecC-CC-----cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC-------
Q psy10063        409 SAKITSLLWGNLDQYIITGHA-KG-----DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA-------  475 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~-Dg-----~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~-------  475 (894)
                      ...|.+++|||||++|++++. |+     .|++||+.+++....+..+.. .       |+|+.|........       
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~  107 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVV-L-------PGTETLSDEEKARRERQRIAA  107 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGT-C---------------------------C
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhc-c-------cccccccchhhhhhhhhhhcc
Confidence            567999999999999999988 88     899999999998877765543 1       22222221110000       


Q ss_pred             ccceEEEEEecCCCEEEEEECCCCEEEEEcCCC---cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        476 VEPINDMQFSKDATMFITASKDHTAKLFTTHDR---QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       476 i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      ...|.+++|+|||++|++++. +.|++||+..+   ++.....+...+.+++|+|||++|++++.+ .            
T Consensus       108 ~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~-~------------  173 (741)
T 2ecf_A          108 MTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR-N------------  173 (741)
T ss_dssp             CEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT-E------------
T ss_pred             ccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC-c------------
Confidence            014788999999999999886 99999999988   655544556789999999999999998754 2            


Q ss_pred             eeEEEEeccccceEEEccCCCCC----------------eEEEEEecCCCEEEEEeCCC---------------------
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGP----------------INSLAFHPDGKSYASGGEDG---------------------  595 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~----------------V~~l~~spdg~~l~sgs~Dg---------------------  595 (894)
                        |++||+..++..+....+...                +.+++|+|||++|++++.|+                     
T Consensus       174 --i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~  251 (741)
T 2ecf_A          174 --LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ  251 (741)
T ss_dssp             --EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred             --EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence              889999888776655444432                47899999999999887665                     


Q ss_pred             ------------cEEEEECCC-Ccccc------CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccC
Q psy10063        596 ------------FLISNTLSN-GLDIS------EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVD  656 (894)
Q Consensus       596 ------------~I~vwdl~~-~~~~~------~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~  656 (894)
                                  .|++||+.. ++...      ....+..++|                                     
T Consensus       252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------  294 (741)
T 2ecf_A          252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-------------------------------------  294 (741)
T ss_dssp             ECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-------------------------------------
T ss_pred             ecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-------------------------------------
Confidence                        344444443 32110      1112223333                                     


Q ss_pred             CCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcce
Q psy10063        657 DSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLM  736 (894)
Q Consensus       657 d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~  736 (894)
                                                                               ++|+.+++...+..  .....+.
T Consensus       295 ---------------------------------------------------------pDg~~l~~~~~~~~--~~~~~i~  315 (741)
T 2ecf_A          295 ---------------------------------------------------------RDPQHLSFQRQSRD--QKKLDLV  315 (741)
T ss_dssp             ---------------------------------------------------------EETTEEEEEEEETT--SSEEEEE
T ss_pred             ---------------------------------------------------------CCCCEEEEEEeccc--CCeEEEE
Confidence                                                                     33333333221100  0111233


Q ss_pred             eeccccCcccccCCCCcceecCCCC----ceEEEeeCCCCCEEEEecCCCcEEEEEcc-CCceeeccccC---CCce-Ee
Q psy10063        737 TWGHIEGTPFKLDGSDTPILAGPVD----IGFKMPEPPKREKLALALADKVSERYRDR-KNKATAGFLLS---CPDF-LF  807 (894)
Q Consensus       737 ~~~~~~g~~~~~dg~~~~~~~~h~~----~v~~la~spdg~~Latgs~Dg~I~iwd~~-~~~~~~~~~~~---~~~~-~f  807 (894)
                      +|+...+..       ..++..+..    .+..++|+|||++|++++.|+.++||.+. .++ +..+..+   +..+ .|
T Consensus       316 ~~d~~~g~~-------~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~  387 (741)
T 2ecf_A          316 EVTLASNQQ-------RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAV  387 (741)
T ss_dssp             EEETTTCCE-------EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEE
T ss_pred             EEECCCCce-------EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEE
Confidence            332222211       111211211    34578999999999999999988888765 333 3333322   2244 49


Q ss_pred             ecCCCeEEEEecCCCCceeEEEeecCC-cceeeeccCCCCCeeEEEEeeCCcEEEEecCC----CcEEEEecCccc
Q psy10063        808 DFDTTREVTTTSTKVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGKSYASGGED----GFVRLHTFDQAY  878 (894)
Q Consensus       808 S~dg~~l~~as~d~~g~~~I~vwd~~t-g~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D----g~V~vWdl~~~~  878 (894)
                      ++||+++++.+.+. +...++||++.. ++.+..|.+ ...+.+++|||||++|+....+    +.+.+|+++.+.
T Consensus       388 s~dg~~l~~~~~~~-~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~  461 (741)
T 2ecf_A          388 DEKAGLAYFRAGIE-SARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK  461 (741)
T ss_dssp             ETTTTEEEEEECSS-CTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE
T ss_pred             eCCCCEEEEEEeCC-CCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe
Confidence            99999887666543 222478898864 666666765 6678899999999988875443    468899886553

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.92  E-value=2.4e-23  Score=236.47  Aligned_cols=269  Identities=9%  Similarity=0.003  Sum_probs=203.7

Q ss_pred             EEEecCCCCEEEEEEcc--------------CCCEEEEecCC------CcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063        403 MQVTDQSAKITSLLWGN--------------LDQYIITGHAK------GDICTWDLRMGRELESISGHAKEPINDMQFSK  462 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~sp--------------dg~~L~sgs~D------g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp  462 (894)
                      ..+.+|...|.++++++              .+.+|++++.+      +.|+|||+. ++.++.+.+|..          
T Consensus       111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~----------  179 (415)
T 2hqs_A          111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQ----------  179 (415)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESS----------
T ss_pred             eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCC----------
Confidence            56788888888888775              15666666544      799999997 555677777776          


Q ss_pred             CCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC---CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CC
Q psy10063        463 DATMFITASHSQAVEPINDMQFSKDATMFITASKDH---TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG-GQ  538 (894)
Q Consensus       463 dg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg---~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~  538 (894)
                                     .|.+++|+|||++|++++.++   .|++||++++++.....+...+.+++|+|||++|++.+ .+
T Consensus       180 ---------------~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~  244 (415)
T 2hqs_A          180 ---------------PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT  244 (415)
T ss_dssp             ---------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred             ---------------cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC
Confidence                           677888888888888888775   89999999999887666778899999999999988554 34


Q ss_pred             CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeC-CC--cEEEEECCCCccccCCCcee
Q psy10063        539 EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE-DG--FLISNTLSNGLDISEGSFTS  615 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg--~I~vwdl~~~~~~~~~~~v~  615 (894)
                      +.            ..|++||+..++. ..+..|...+.+++|+|||++|++++. ++  .|++||+..++..       
T Consensus       245 g~------------~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-------  304 (415)
T 2hqs_A          245 GS------------LNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-------  304 (415)
T ss_dssp             SS------------CEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-------
T ss_pred             CC------------ceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-------
Confidence            32            1388999988775 567788899999999999999998876 45  4666666432100       


Q ss_pred             eeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCccee
Q psy10063        616 SSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  695 (894)
Q Consensus       616 ~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  695 (894)
                                                                                                      
T Consensus       305 --------------------------------------------------------------------------------  304 (415)
T 2hqs_A          305 --------------------------------------------------------------------------------  304 (415)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE
Q psy10063        696 ELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL  775 (894)
Q Consensus       696 ~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L  775 (894)
                                                                                 .+..+...+.+++|+|||++|
T Consensus       305 -----------------------------------------------------------~l~~~~~~~~~~~~spdG~~l  325 (415)
T 2hqs_A          305 -----------------------------------------------------------RITWEGSQNQDADVSSDGKFM  325 (415)
T ss_dssp             -----------------------------------------------------------ECCCSSSEEEEEEECTTSSEE
T ss_pred             -----------------------------------------------------------EEecCCCcccCeEECCCCCEE
Confidence                                                                       001122346688999999999


Q ss_pred             EEecCC---CcEEEEEccCCceeeccc-cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063        776 ALALAD---KVSERYRDRKNKATAGFL-LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL  851 (894)
Q Consensus       776 atgs~D---g~I~iwd~~~~~~~~~~~-~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l  851 (894)
                      ++++.+   ..|++||+..++...-.. .....++|+|||++|++++.++. ...|++||+. ++.+..+.+|.+.|.++
T Consensus       326 ~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~-g~~~~~l~~~~~~v~~~  403 (415)
T 2hqs_A          326 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTD-GRFKARLPATDGQVKFP  403 (415)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETT-EEEEEEEETT-SCCEEECCCSSSEEEEE
T ss_pred             EEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECC-CCcEEEeeCCCCCCcCC
Confidence            988765   579999998876632111 24557789999999998887652 3359999997 66678899999999999


Q ss_pred             EEeeCCc
Q psy10063        852 AFHPDGK  858 (894)
Q Consensus       852 ~fSpdg~  858 (894)
                      +|+|.-.
T Consensus       404 ~~~~~~~  410 (415)
T 2hqs_A          404 AWSPYLH  410 (415)
T ss_dssp             EECCCCC
T ss_pred             ccccccc
Confidence            9998653

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=2.1e-22  Score=220.50  Aligned_cols=287  Identities=10%  Similarity=0.071  Sum_probs=200.9

Q ss_pred             EEEccCCCE-EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        415 LLWGNLDQY-IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       415 l~~spdg~~-L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      +.|.+++++ +++++.++.|++||+.+++.+..+..+..                         .+ +++|+|+|++|++
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-------------------------~~-~~~~s~dg~~l~~   56 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYD-------------------------FV-DTAITSDCSNVVV   56 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCC-------------------------EE-EEEECSSSCEEEE
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCC-------------------------cc-eEEEcCCCCEEEE
Confidence            456666554 66778899999999999999888776554                         45 7888888886666


Q ss_pred             EEC-CCCEEEEEcCCCcE-EEEEeCCCCeeE-EEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc
Q psy10063        494 ASK-DHTAKLFTTHDRQL-LKTYTTERPVNS-AALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK  570 (894)
Q Consensus       494 gs~-Dg~V~iwdl~~~~~-~~~~~~~~~v~~-l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~  570 (894)
                      ++. ++.|++||+.++++ ...+..+..... ++|+|+|++|+++..++.           ...|++||+..++.+..+.
T Consensus        57 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-----------~~~i~v~d~~~~~~~~~~~  125 (331)
T 3u4y_A           57 TSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNH-----------PFNMQSYSFLKNKFISTIP  125 (331)
T ss_dssp             EESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSS-----------SCEEEEEETTTTEEEEEEE
T ss_pred             EeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCC-----------cccEEEEECCCCCeEEEEE
Confidence            655 88999999999987 777766555555 999999999995444421           0018999999998888776


Q ss_pred             CCCCCeEEEEEecCCCEEEEE-eCCCc-EEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCe
Q psy10063        571 GHFGPINSLAFHPDGKSYASG-GEDGF-LISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGG  648 (894)
Q Consensus       571 ~h~~~V~~l~~spdg~~l~sg-s~Dg~-I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~  648 (894)
                      .+ ..+.+++|+|||++|+++ ..++. |++|+++....                 +.        ....          
T Consensus       126 ~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~-----------------~~--------~~~~----------  169 (331)
T 3u4y_A          126 IP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV-----------------LF--------DTGQ----------  169 (331)
T ss_dssp             CC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC-----------------EE--------EEEE----------
T ss_pred             CC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCc-----------------Ee--------ecCC----------
Confidence            54 456899999999865554 55688 99999863210                 00        0000          


Q ss_pred             eeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccc
Q psy10063        649 VFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQ  728 (894)
Q Consensus       649 i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~  728 (894)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (331)
T 3u4y_A          170 --------------------------------------------------------------------------------  169 (331)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE-ecCCCcEEEEEccCCce---eeccc--cCC
Q psy10063        729 SVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL-ALADKVSERYRDRKNKA---TAGFL--LSC  802 (894)
Q Consensus       729 ~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat-gs~Dg~I~iwd~~~~~~---~~~~~--~~~  802 (894)
                                               ..+ .+.....+++|+|+|++|++ +..++.|++||+..++.   +..+.  ...
T Consensus       170 -------------------------~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~  223 (331)
T 3u4y_A          170 -------------------------EFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLP  223 (331)
T ss_dssp             -------------------------EEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCC
T ss_pred             -------------------------ccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCC
Confidence                                     000 01122468899999996654 55688999999988776   44443  334


Q ss_pred             CceEeecCCCeEEEEecCCCCceeEEEeecCCcce--eeeccCC----CCC---eeEEEEeeCCcEEEE-ecCCCcEEEE
Q psy10063        803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE--FARIKGH----FGP---INSLAFHPDGKSYAS-GGEDGFVRLH  872 (894)
Q Consensus       803 ~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~--l~~l~gH----~~~---V~~l~fSpdg~~LaS-~s~Dg~V~vW  872 (894)
                      ..++|+|||++++++.....   .|.+||++++++  +..+..+    ...   +.+++|+|||++|+. +..++.|+||
T Consensus       224 ~~~~~spdg~~l~v~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~  300 (331)
T 3u4y_A          224 GTIVVSRDGSTVYVLTESTV---DVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF  300 (331)
T ss_dssp             CCEEECTTSSEEEEECSSEE---EEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ceEEECCCCCEEEEEEcCCC---EEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence            57899999998887765332   599999998877  3333222    222   355899999998865 5556799999


Q ss_pred             ecCcccccccc
Q psy10063        873 TFDQAYFDYTF  883 (894)
Q Consensus       873 dl~~~~~~~~~  883 (894)
                      ++.........
T Consensus       301 d~~~~~~~~~~  311 (331)
T 3u4y_A          301 TISGKVVGYVA  311 (331)
T ss_dssp             ETTSCEEEECT
T ss_pred             EecCCccccee
Confidence            99887654443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.91  E-value=8.4e-22  Score=231.02  Aligned_cols=337  Identities=11%  Similarity=0.033  Sum_probs=221.5

Q ss_pred             eeccCccEEEecCCC-----------eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEec--CCCeEEEEecCCC
Q psy10063        385 SMSPAARKLATNAEP-----------VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDL--RMGRELESISGHA  451 (894)
Q Consensus       385 ~~s~dg~~l~~~~~~-----------~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~--~tg~~~~~l~~h~  451 (894)
                      .+++++++++....+           .+...+..+.. +.+++|+|||++|++++.|+.|++||+  .+++++..+..+.
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~  222 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI  222 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC
Confidence            466777666654332           22234442222 899999999999999999999999999  8899888887543


Q ss_pred             CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec----CCCEEEEEEC-CCCEEEEEcCCCcEEEEEeCC---------
Q psy10063        452 KEPINDMQFSKDATMFITASHSQAVEPINDMQFSK----DATMFITASK-DHTAKLFTTHDRQLLKTYTTE---------  517 (894)
Q Consensus       452 ~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp----dg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~~---------  517 (894)
                                                .+..|+|+|    ||++|++++. ++.|.|||..++++++.+...         
T Consensus       223 --------------------------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~  276 (543)
T 1nir_A          223 --------------------------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY  276 (543)
T ss_dssp             --------------------------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCE
T ss_pred             --------------------------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcccc
Confidence                                      477888888    8998888874 899999999999999888642         


Q ss_pred             ---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE--EccCCCCCeEEEEEecCCCEEEEEe
Q psy10063        518 ---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       518 ---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~--~l~~h~~~V~~l~~spdg~~l~sgs  592 (894)
                         ..+.++.|+++++.+++...+...             |.+||+..++.+.  .+ .+...+.+++|+|+|++|++++
T Consensus       277 ~~~~~v~~i~~s~~~~~~~vs~~~~g~-------------i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~  342 (543)
T 1nir_A          277 HPEPRVAAIIASHEHPEFIVNVKETGK-------------VLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAA  342 (543)
T ss_dssp             ESCCCEEEEEECSSSSEEEEEETTTTE-------------EEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEE
T ss_pred             ccCCceEEEEECCCCCEEEEEECCCCe-------------EEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEe
Confidence               268899999998887776655432             8888887765443  33 3566788999999999876554


Q ss_pred             -CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHh
Q psy10063        593 -EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMA  671 (894)
Q Consensus       593 -~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~  671 (894)
                       .++.|++||+++++.+...      .   .+..  .+.+....+.     .++...++..+...+..|.+|+..     
T Consensus       343 ~~~~~v~v~D~~tg~l~~~i------~---~g~~--ph~g~g~~~~-----~p~~g~~~~s~~~~d~~V~v~d~~-----  401 (543)
T 1nir_A          343 NNSNKVAVIDSKDRRLSALV------D---VGKT--PHPGRGANFV-----HPKYGPVWSTSHLGDGSISLIGTD-----  401 (543)
T ss_dssp             GGGTEEEEEETTTTEEEEEE------E---CSSS--BCCTTCEEEE-----ETTTEEEEEEEBSSSSEEEEEECC-----
T ss_pred             cCCCeEEEEECCCCeEEEee------c---cCCC--CCCCCCcccC-----CCCCccEEEeccCCCceEEEEEeC-----
Confidence             5889999999887533110      0   0000  0000000000     011111111111122333333311     


Q ss_pred             hhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCC
Q psy10063        672 RNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGS  751 (894)
Q Consensus       672 ~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~  751 (894)
                                                                                            ....-....+
T Consensus       402 ----------------------------------------------------------------------~~~~~~~~~~  411 (543)
T 1nir_A          402 ----------------------------------------------------------------------PKNHPQYAWK  411 (543)
T ss_dssp             ----------------------------------------------------------------------TTTCTTTBTS
T ss_pred             ----------------------------------------------------------------------CCCCchhcCe
Confidence                                                                                  1000000122


Q ss_pred             CcceecCCCCceEEEeeCCCCCEEEEec-------CCCcEEEEEccCCceeeccc------------cCCCceEeecCCC
Q psy10063        752 DTPILAGPVDIGFKMPEPPKREKLALAL-------ADKVSERYRDRKNKATAGFL------------LSCPDFLFDFDTT  812 (894)
Q Consensus       752 ~~~~~~~h~~~v~~la~spdg~~Latgs-------~Dg~I~iwd~~~~~~~~~~~------------~~~~~~~fS~dg~  812 (894)
                      .+..+.+|...+..|+++|++++|++++       .++.|+|||+.+++......            ..+..+.|++||+
T Consensus       412 ~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~  491 (543)
T 1nir_A          412 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD  491 (543)
T ss_dssp             EEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred             EEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence            3345666777788899999999999987       37799999999887652221            1223567999999


Q ss_pred             eEEEEecCC-CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcE
Q psy10063        813 REVTTTSTK-VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS  859 (894)
Q Consensus       813 ~l~~as~d~-~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~  859 (894)
                      +++++...+ ..+-.|.|||.++++++..++.+.-      +.|+|++
T Consensus       492 ~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~------~~p~g~~  533 (543)
T 1nir_A          492 EVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRL------ITPTGKF  533 (543)
T ss_dssp             EEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTC------CSEEEEE
T ss_pred             EEEEEeecCCCCCCeEEEEECCCceEEEeecCCCc------cCCCeee
Confidence            999885421 1122699999999999999886531      3466654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=7.5e-22  Score=217.70  Aligned_cols=277  Identities=11%  Similarity=0.033  Sum_probs=212.2

Q ss_pred             cCCCCEEEEEEccCCCEEEEecC-------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHA-------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~-------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      .+...+.+++|+|+|++|++++.       ++.|.+||+.+++.+..+....                          .+
T Consensus        38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--------------------------~~   91 (353)
T 3vgz_A           38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--------------------------KP   91 (353)
T ss_dssp             EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--------------------------CC
T ss_pred             hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--------------------------Cc
Confidence            34567899999999998888764       5689999999999888876543                          35


Q ss_pred             EEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCC----------CeeEEEEcCCCCEEEEEEC-CCCeEEEecc
Q psy10063        480 NDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYTTER----------PVNSAALSPILPHVVLGGG-QEAREVTTTS  547 (894)
Q Consensus       480 ~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~----------~v~~l~~spdg~~l~~~~~-~~~~~v~~~~  547 (894)
                      .+++|+++|++|+.+ ..++.|.+||+++++.+..+..+.          .+.+++|+|+|++|++++. +..       
T Consensus        92 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-------  164 (353)
T 3vgz_A           92 FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKES-------  164 (353)
T ss_dssp             CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSC-------
T ss_pred             ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCc-------
Confidence            677888888855544 457899999999999988887532          2688999999999888873 222       


Q ss_pred             CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEE
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~  627 (894)
                            .|.+||+..++.+..+..+...+.+++|+|+|++|++++.++.|.+||+..++.+.                  
T Consensus       165 ------~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~------------------  220 (353)
T 3vgz_A          165 ------VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS------------------  220 (353)
T ss_dssp             ------EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE------------------
T ss_pred             ------eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE------------------
Confidence                  28899999999988887666678999999999999999999999999986543110                  


Q ss_pred             ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEe
Q psy10063        628 SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMAR  707 (894)
Q Consensus       628 ~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~  707 (894)
                             .+..                                                                     
T Consensus       221 -------~~~~---------------------------------------------------------------------  224 (353)
T 3vgz_A          221 -------RKKL---------------------------------------------------------------------  224 (353)
T ss_dssp             -------EEEC---------------------------------------------------------------------
T ss_pred             -------EEEc---------------------------------------------------------------------
Confidence                   0000                                                                     


Q ss_pred             eeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecC-CCcEEE
Q psy10063        708 NRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA-DKVSER  786 (894)
Q Consensus       708 ~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~-Dg~I~i  786 (894)
                                                                     ...++...+..++|+|++++|++++. ++.|++
T Consensus       225 -----------------------------------------------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~  257 (353)
T 3vgz_A          225 -----------------------------------------------LDDGKEHFFINISLDTARQRAFITDSKAAEVLV  257 (353)
T ss_dssp             -----------------------------------------------CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEE
T ss_pred             -----------------------------------------------CCCCCCcccceEEECCCCCEEEEEeCCCCEEEE
Confidence                                                           00012334668899999998776655 489999


Q ss_pred             EEccCCceeeccccC-CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecC
Q psy10063        787 YRDRKNKATAGFLLS-CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE  865 (894)
Q Consensus       787 wd~~~~~~~~~~~~~-~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~  865 (894)
                      ||...++.+..+..+ ...++|+++|++++++.....   .|++||+.+++.+..+..+. .+.+++|++||++|+.+..
T Consensus       258 ~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~---~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~  333 (353)
T 3vgz_A          258 VDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAG---KVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVK  333 (353)
T ss_dssp             EETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTT---EEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEE
T ss_pred             EECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCC---eEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEc
Confidence            999988876655433 346889999998877764332   69999999999888877554 6789999999997777665


Q ss_pred             CC
Q psy10063        866 DG  867 (894)
Q Consensus       866 Dg  867 (894)
                      ++
T Consensus       334 ~~  335 (353)
T 3vgz_A          334 QK  335 (353)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.91  E-value=1.9e-23  Score=254.66  Aligned_cols=329  Identities=10%  Similarity=-0.003  Sum_probs=203.9

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCC--CeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKE--PINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~--~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ..+.+++|+|||++|++ +.||.|++||+.++++...+..|...  .|.+++|||||++|++++.++.+..         
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~---------   86 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ---------   86 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS---------
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCcccee---------
Confidence            34678999999998776 68999999999999988888776531  2455555555554444443322100         


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                            .+.++.|++||+.++++......   ...+.+++|||||++|++++. +.              |++||+..++
T Consensus        87 ------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~--------------i~~~~~~~g~  145 (723)
T 1xfd_A           87 ------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NN--------------IYYCAHVGKQ  145 (723)
T ss_dssp             ------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TE--------------EEEESSSSSC
T ss_pred             ------ecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-Ce--------------EEEEECCCCc
Confidence                  01247899999999887322222   234889999999999999886 32              8899998888


Q ss_pred             eEEEccCCCCCe------------------EEEEEecCCCEEEEEeCC-CcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063        565 EFARIKGHFGPI------------------NSLAFHPDGKSYASGGED-GFLISNTLSNGLDISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       565 ~~~~l~~h~~~V------------------~~l~~spdg~~l~sgs~D-g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~  625 (894)
                      ..+....+...+                  .+++|+|||++|++++.| +.+++|++....... ...+..+.|.++|..
T Consensus       146 ~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~  224 (723)
T 1xfd_A          146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI-YPTVKPYHYPKAGSE  224 (723)
T ss_dssp             CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS-SCCCEEEECCBTTSC
T ss_pred             eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcC-CCcceeccCCCCCCC
Confidence            776665544433                  789999999999988765 457777764321100 000111111111100


Q ss_pred             EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063        626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM  705 (894)
Q Consensus       626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~  705 (894)
                                                   .....                                              
T Consensus       225 -----------------------------~~~~~----------------------------------------------  229 (723)
T 1xfd_A          225 -----------------------------NPSIS----------------------------------------------  229 (723)
T ss_dssp             -----------------------------CCEEE----------------------------------------------
T ss_pred             -----------------------------CCeeE----------------------------------------------
Confidence                                         00011                                              


Q ss_pred             EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcc-cccCCCCcceecCCCCceEEEeeCCCCCEEEEecC----
Q psy10063        706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTP-FKLDGSDTPILAGPVDIGFKMPEPPKREKLALALA----  780 (894)
Q Consensus       706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~-~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~----  780 (894)
                                                   +.+|+...+.. ..+...  ..+..+...+..++|+|||++|++...    
T Consensus       230 -----------------------------l~~~d~~~~~~~~~l~~~--~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~  278 (723)
T 1xfd_A          230 -----------------------------LHVIGLNGPTHDLEMMPP--DDPRMREYYITMVKWATSTKVAVTWLNRAQN  278 (723)
T ss_dssp             -----------------------------EEEEESSSSCCCEECCCC--CCGGGSSEEEEEEEESSSSEEEEEEEETTSC
T ss_pred             -----------------------------EEEEECCCCceeEEeeCC--ccCCCccceeEEEEEeCCCeEEEEEEcCCCC
Confidence                                         12221111110 000000  001123556889999999999876643    


Q ss_pred             CCcEEEEEccCCceeecccc---C-C----CceEeecCCCeEEEEecCCCC----ceeEEEee-cCCcc--eeeeccCCC
Q psy10063        781 DKVSERYRDRKNKATAGFLL---S-C----PDFLFDFDTTREVTTTSTKVG----KFDARFYH-LIFEE--EFARIKGHF  845 (894)
Q Consensus       781 Dg~I~iwd~~~~~~~~~~~~---~-~----~~~~fS~dg~~l~~as~d~~g----~~~I~vwd-~~tg~--~l~~l~gH~  845 (894)
                      +..|++||+..++....+..   . +    ..++|+|||++|+.++.+..+    ...|++|| ...++  ++..+..+.
T Consensus       279 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~  358 (723)
T 1xfd_A          279 VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD  358 (723)
T ss_dssp             EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS
T ss_pred             eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC
Confidence            35799999988776432211   1 1    378899999999887443333    34588888 45444  155565444


Q ss_pred             CCeeE-EEEeeCCcEEEEecCC---CcEEEEecCc
Q psy10063        846 GPINS-LAFHPDGKSYASGGED---GFVRLHTFDQ  876 (894)
Q Consensus       846 ~~V~~-l~fSpdg~~LaS~s~D---g~V~vWdl~~  876 (894)
                      ..+.. ++|+|||++|+..+.+   +.++||+++.
T Consensus       359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~  393 (723)
T 1xfd_A          359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT  393 (723)
T ss_dssp             SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred             eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence            44544 7999999999765554   7899999864

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.91  E-value=1.1e-22  Score=232.07  Aligned_cols=163  Identities=18%  Similarity=0.346  Sum_probs=139.8

Q ss_pred             EEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeE-------EEEecCCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy10063        403 MQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRE-------LESISGHAKEPINDMQFSKDATMFITASHSQ  474 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~-------~~~l~~h~~~~V~~v~~spdg~~la~~~~d~  474 (894)
                      ..+.+|.+.|.+|+|+|+++ +|++|+.||.|+|||+..+..       ...+.+|..                      
T Consensus       175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~----------------------  232 (430)
T 2xyi_A          175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA----------------------  232 (430)
T ss_dssp             EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS----------------------
T ss_pred             EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC----------------------
Confidence            45678999999999999998 999999999999999987432       355566766                      


Q ss_pred             CccceEEEEEec-CCCEEEEEECCCCEEEEEcCCC---cEEEEEe-CCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccC
Q psy10063        475 AVEPINDMQFSK-DATMFITASKDHTAKLFTTHDR---QLLKTYT-TERPVNSAALSPILP-HVVLGGGQEAREVTTTST  548 (894)
Q Consensus       475 ~i~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~---~~~~~~~-~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~  548 (894)
                         .|.+++|+| ++.+|++++.||.|+|||++.+   +.+..+. |...|.+++|+|+++ +|++++.++.        
T Consensus       233 ---~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~--------  301 (430)
T 2xyi_A          233 ---VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT--------  301 (430)
T ss_dssp             ---CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE--------
T ss_pred             ---CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe--------
Confidence               688888888 6789999999999999999987   5666664 568899999999998 5778888886        


Q ss_pred             ccceeeEEEEeccc-cceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10063        549 KVGKFDARFYHLIF-EEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSN  604 (894)
Q Consensus       549 ~~~~~~v~vwd~~~-~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~  604 (894)
                            |++||++. ++.+..+.+|...|.+|+|+|+++ +|++++.||.|+|||+..
T Consensus       302 ------v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~  353 (430)
T 2xyi_A          302 ------VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK  353 (430)
T ss_dssp             ------EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred             ------EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence                  89999987 567888889999999999999985 699999999999999864

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.90  E-value=4.3e-22  Score=217.74  Aligned_cols=296  Identities=12%  Similarity=-0.007  Sum_probs=195.9

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-EEECCCCE
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI-TASKDHTA  500 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~-sgs~Dg~V  500 (894)
                      ++|++++.++.|++||+.+++.++.+.......                       .+.+++|+|+|++|+ ++..++.|
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-----------------------~~~~~~~s~dg~~l~v~~~~~~~v   58 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGP-----------------------TPMVPMVAPGGRIAYATVNKSESL   58 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTT-----------------------CCCCEEECTTSSEEEEEETTTTEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCC-----------------------CccceEEcCCCCEEEEEeCCCCeE
Confidence            478999999999999999999988876433100                       156677888887654 44557899


Q ss_pred             EEEEcCCCcEEEEEeCCC------CeeEEEEcCCCCEEEEEE------------CCCCeEEEeccCccceeeEEEEeccc
Q psy10063        501 KLFTTHDRQLLKTYTTER------PVNSAALSPILPHVVLGG------------GQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~~~~------~v~~l~~spdg~~l~~~~------------~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      ++||+.+++.+..+....      .+.+++|+|+|++|+++.            .++              .|++||+..
T Consensus        59 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~--------------~i~v~d~~~  124 (337)
T 1pby_B           59 VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT--------------RVALYDAET  124 (337)
T ss_dssp             EEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC--------------EEEEEETTT
T ss_pred             EEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCc--------------eEEEEECCC
Confidence            999999999988887543      688999999999999886            223              289999998


Q ss_pred             cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       563 ~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      ++.+..+.. ...+.+++|+|||++|+++  ++.|++||++.++.+.                         .+......
T Consensus       125 ~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~-------------------------~~~~~~~~  176 (337)
T 1pby_B          125 LSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVE-------------------------DKPIQSWE  176 (337)
T ss_dssp             TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEE-------------------------EECSTTTT
T ss_pred             CcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEee-------------------------eeeccccC
Confidence            888777754 4467889999999988887  6889999997654210                         00000000


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                     ..                                                  +.++++|..+.+.
T Consensus       177 ---------------~~--------------------------------------------------~~~s~dg~~l~~~  191 (337)
T 1pby_B          177 ---------------AE--------------------------------------------------TYAQPDVLAVWNQ  191 (337)
T ss_dssp             ---------------TT--------------------------------------------------TBCCCBCCCCCCC
T ss_pred             ---------------CC--------------------------------------------------ceeCCCccEEeee
Confidence                           00                                                  0001111110000


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee----cc
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA----GF  798 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~----~~  798 (894)
                      .....       ...                        .++.......+.... ......|.+||+..++...    ..
T Consensus       192 ~~~~~-------~~~------------------------~~~~~~~~~~~~~~~-~~~~~~v~~~d~~~~~~~~~~~~~~  239 (337)
T 1pby_B          192 HESSG-------VMA------------------------TPFYTARKDIDPADP-TAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             CTTTT-------EEE------------------------EEEEEEBTTSCTTSG-GGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ccCCC-------cee------------------------eeeeccccccccccc-cccccceEEEeCCCCCceEeecCCC
Confidence            00000       000                        000000000000000 0111258888888776641    11


Q ss_pred             ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       799 ~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      ......++|++||++++++  ++    .|++||+++++.+..+..+ ..+.+++|+|||++|++++.|+.|++|+++.++
T Consensus       240 ~~~~~~~~~s~dg~~l~~~--~~----~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          240 DVFYFSTAVNPAKTRAFGA--YN----VLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEE--ES----EEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred             CCceeeEEECCCCCEEEEe--CC----eEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence            1223358899999999888  32    5999999999888777654 467899999999999999999999999999998


Q ss_pred             cccccccC
Q psy10063        879 FDYTFDIS  886 (894)
Q Consensus       879 ~~~~~~~~  886 (894)
                      .+..+..+
T Consensus       313 ~~~~~~~~  320 (337)
T 1pby_B          313 KKGQVDLP  320 (337)
T ss_dssp             EEEEEECG
T ss_pred             EEEEEEcC
Confidence            88877654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.89  E-value=2.5e-21  Score=212.28  Aligned_cols=270  Identities=10%  Similarity=0.071  Sum_probs=184.8

Q ss_pred             EEEEecCCCcEEEEecC-CC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECC-C
Q psy10063        423 YIITGHAKGDICTWDLR-MG--RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKD-H  498 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~-tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~D-g  498 (894)
                      ++++++.|+.|++||+. .+  +.+..+. +..                         .+.+++|+|+|++|++++.+ +
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~spdg~~l~~~~~~~~   60 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQVVD-VPG-------------------------QVQPMVVSPDKRYLYVGVRPEF   60 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS-------------------------CCCCEEECTTSSEEEEEETTTT
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCC-------------------------CCceEEECCCCCEEEEeecCCC
Confidence            34444789999999995 34  2233332 333                         57788888999988888876 8


Q ss_pred             CEEEEEcC--CCc--EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec---cccceEEEccC
Q psy10063        499 TAKLFTTH--DRQ--LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL---IFEEEFARIKG  571 (894)
Q Consensus       499 ~V~iwdl~--~~~--~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~---~~~~~~~~l~~  571 (894)
                      .|++|++.  .++  .+..+.....+.+++|+|+|++|++++..+..             |++||+   ..++.+..+..
T Consensus        61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-------------i~~~d~~~~~~~~~~~~~~~  127 (343)
T 1ri6_A           61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGN-------------VSVTRLEDGLPVGVVDVVEG  127 (343)
T ss_dssp             EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTE-------------EEEEEEETTEEEEEEEEECC
T ss_pred             eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCe-------------EEEEECCCCccccccccccC
Confidence            99999998  555  34455555689999999999999888764431             778887   44445555544


Q ss_pred             CCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeee
Q psy10063        572 HFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVF  650 (894)
Q Consensus       572 h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~  650 (894)
                      + ..+.+++|+|+|++|++++ .++.|++|++.....+                         ..+..            
T Consensus       128 ~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~-------------------------~~~~~------------  169 (343)
T 1ri6_A          128 L-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL-------------------------VAQDP------------  169 (343)
T ss_dssp             C-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE-------------------------EEEEE------------
T ss_pred             C-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce-------------------------eeecc------------
Confidence            4 4588999999999888877 8899999998641100                         00000            


Q ss_pred             eccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccc
Q psy10063        651 SGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV  730 (894)
Q Consensus       651 sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~  730 (894)
                        .       .                                                                     
T Consensus       170 --~-------~---------------------------------------------------------------------  171 (343)
T 1ri6_A          170 --A-------E---------------------------------------------------------------------  171 (343)
T ss_dssp             --E-------E---------------------------------------------------------------------
T ss_pred             --c-------c---------------------------------------------------------------------
Confidence              0       0                                                                     


Q ss_pred             cCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe-cCCCcEEEEEccC--Cce--eec---cccC-
Q psy10063        731 DASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA-LADKVSERYRDRK--NKA--TAG---FLLS-  801 (894)
Q Consensus       731 ~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg-s~Dg~I~iwd~~~--~~~--~~~---~~~~-  801 (894)
                                              ........+.+++|+|++++|+++ ..++.|++|++..  ++.  +..   +... 
T Consensus       172 ------------------------~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~  227 (343)
T 1ri6_A          172 ------------------------VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENF  227 (343)
T ss_dssp             ------------------------EECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTC
T ss_pred             ------------------------cccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccc
Confidence                                    000011235578999999977654 5889999999853  322  111   1111 


Q ss_pred             -----CCceEeecCCCeEEEEecCCCCceeEEEeecC----CcceeeeccCCCCCeeEEEEeeCCcEEEEec-CCCcEEE
Q psy10063        802 -----CPDFLFDFDTTREVTTTSTKVGKFDARFYHLI----FEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFVRL  871 (894)
Q Consensus       802 -----~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~----tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s-~Dg~V~v  871 (894)
                           ...++|+++|++|+++.....   .|++||+.    ..+.+..+..+.. +.+++|+|||++|++++ .|+.|+|
T Consensus       228 ~~~~~~~~i~~s~dg~~l~v~~~~~~---~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v  303 (343)
T 1ri6_A          228 SDTRWAADIHITPDGRHLYACDRTAS---LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISV  303 (343)
T ss_dssp             CSCCCEEEEEECTTSSEEEEEETTTT---EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEE
T ss_pred             cccCCccceEECCCCCEEEEEecCCC---EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEE
Confidence                 114889999998886653321   69999998    3355555655555 88999999999888877 6899999


Q ss_pred             EecC
Q psy10063        872 HTFD  875 (894)
Q Consensus       872 Wdl~  875 (894)
                      |+++
T Consensus       304 ~~~d  307 (343)
T 1ri6_A          304 YEIV  307 (343)
T ss_dssp             EEEE
T ss_pred             EEEc
Confidence            9665

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.89  E-value=1.4e-21  Score=238.16  Aligned_cols=199  Identities=8%  Similarity=-0.008  Sum_probs=138.4

Q ss_pred             eeeeccCccEEEecCCCe----------EEEEEecCCC---CEEEEEEccCCCEEEEecCC---------CcEEEEecCC
Q psy10063        383 LNSMSPAARKLATNAEPV----------VKMQVTDQSA---KITSLLWGNLDQYIITGHAK---------GDICTWDLRM  440 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~~~----------~~~~l~~H~~---~V~~l~~spdg~~L~sgs~D---------g~I~iWd~~t  440 (894)
                      .++|+|||++++...++.          ....+.+|..   .|.+++|||||++|++++.+         +.|+|||+.+
T Consensus        21 ~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~  100 (723)
T 1xfd_A           21 EAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH  100 (723)
T ss_dssp             CCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred             ccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence            346677777555433222          2234555654   49999999999999998764         7788999998


Q ss_pred             CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCC
Q psy10063        441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERP  519 (894)
Q Consensus       441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~  519 (894)
                      ++. +.+..+.. .                     ...+.+++|+|||++|++++. +.|++||+..+++.+.... ...
T Consensus       101 ~~~-~~l~~~~~-~---------------------~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~  156 (723)
T 1xfd_A          101 GDP-QSLDPPEV-S---------------------NAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEG  156 (723)
T ss_dssp             CCC-EECCCTTC-C---------------------SCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTT
T ss_pred             Cce-EeccCCcc-c---------------------cccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCC
Confidence            876 44432221 0                     003677888888888888875 7899999999888776654 232


Q ss_pred             e------------------eEEEEcCCCCEEEEEECCC-CeEEEeccC-------------------ccceeeEEEEecc
Q psy10063        520 V------------------NSAALSPILPHVVLGGGQE-AREVTTTST-------------------KVGKFDARFYHLI  561 (894)
Q Consensus       520 v------------------~~l~~spdg~~l~~~~~~~-~~~v~~~~~-------------------~~~~~~v~vwd~~  561 (894)
                      +                  .+++|+|||++|++++.++ .+.+|.+..                   ......|++||+.
T Consensus       157 ~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~  236 (723)
T 1xfd_A          157 VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN  236 (723)
T ss_dssp             TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred             ceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence            3                  7899999999999987653 344444321                   1123469999999


Q ss_pred             ccceEEEccCC------CCCeEEEEEecCCCEEEEEeC----CCcEEEEECCCC
Q psy10063        562 FEEEFARIKGH------FGPINSLAFHPDGKSYASGGE----DGFLISNTLSNG  605 (894)
Q Consensus       562 ~~~~~~~l~~h------~~~V~~l~~spdg~~l~sgs~----Dg~I~vwdl~~~  605 (894)
                      .++....+..+      ...+.+++|+|||++|++...    +..|++||+..+
T Consensus       237 ~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g  290 (723)
T 1xfd_A          237 GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG  290 (723)
T ss_dssp             SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred             CCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence            88866666654      567899999999998876643    246888887654

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.89  E-value=7.2e-22  Score=210.99  Aligned_cols=257  Identities=12%  Similarity=0.034  Sum_probs=186.1

Q ss_pred             EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEc
Q psy10063        426 TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTT  505 (894)
Q Consensus       426 sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl  505 (894)
                      .++.|+.|++||+..++... +..|..                         .|.+++|+|+|++|++++ ++.|++||+
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~-------------------------~v~~~~~spdg~~l~~~~-~~~i~~~d~   69 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRV-VWQTPE-------------------------LFEAPNWSPDGKYLLLNS-EGLLYRLSL   69 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEE-EEEESS-------------------------CCEEEEECTTSSEEEEEE-TTEEEEEES
T ss_pred             CCCcceeEEEEeCCCCceee-eccCCc-------------------------ceEeeEECCCCCEEEEEc-CCeEEEEeC
Confidence            45678999999999888664 444555                         678888888888888876 789999999


Q ss_pred             CC-CcEEEEEeCC--CCeeEEEEcCCCCEEEEEECC--CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEE
Q psy10063        506 HD-RQLLKTYTTE--RPVNSAALSPILPHVVLGGGQ--EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  580 (894)
Q Consensus       506 ~~-~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~--~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~  580 (894)
                      .. +++...+...  ..+.+++|+|+|++|++++.+  +..            .|.+|++..++ ...+..+. .+.+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~------------~l~~~~~~~~~-~~~~~~~~-~~~~~~  135 (297)
T 2ojh_A           70 AGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS------------AIYLLPSTGGT-PRLMTKNL-PSYWHG  135 (297)
T ss_dssp             SSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC------------EEEEEETTCCC-CEECCSSS-SEEEEE
T ss_pred             CCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcc------------eEEEEECCCCc-eEEeecCC-CccceE
Confidence            99 8877766543  678999999999999999843  332            24555555554 34444443 489999


Q ss_pred             EecCCCEEE-EEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCc
Q psy10063        581 FHPDGKSYA-SGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSG  659 (894)
Q Consensus       581 ~spdg~~l~-sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~  659 (894)
                      |+|||++|+ +++.|+.++||+++....                        .                           
T Consensus       136 ~spdg~~l~~~~~~~~~~~l~~~~~~~~------------------------~---------------------------  164 (297)
T 2ojh_A          136 WSPDGKSFTYCGIRDQVFDIYSMDIDSG------------------------V---------------------------  164 (297)
T ss_dssp             ECTTSSEEEEEEEETTEEEEEEEETTTC------------------------C---------------------------
T ss_pred             ECCCCCEEEEEECCCCceEEEEEECCCC------------------------c---------------------------
Confidence            999999877 677889999997632100                        0                           


Q ss_pred             eEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeec
Q psy10063        660 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWG  739 (894)
Q Consensus       660 i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~  739 (894)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (297)
T 2ojh_A          165 --------------------------------------------------------------------------------  164 (297)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec-CCCcEEEEEcc-CCceeeccc---cCCCceEeecCCCeE
Q psy10063        740 HIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL-ADKVSERYRDR-KNKATAGFL---LSCPDFLFDFDTTRE  814 (894)
Q Consensus       740 ~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs-~Dg~I~iwd~~-~~~~~~~~~---~~~~~~~fS~dg~~l  814 (894)
                                   ...+..+...+.+++|+|++++|+.++ .++.++||++. ....+..+.   ..+..++|+++|++|
T Consensus       165 -------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l  231 (297)
T 2ojh_A          165 -------------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKV  231 (297)
T ss_dssp             -------------EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEE
T ss_pred             -------------ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEE
Confidence                         000112334567899999999888665 58999999876 333333332   233457799999999


Q ss_pred             EEEecCCC-------CceeEEEeecCCcce--eeeccCCCCCeeEEEEeeCCcEEEEecCCC
Q psy10063        815 VTTTSTKV-------GKFDARFYHLIFEEE--FARIKGHFGPINSLAFHPDGKSYASGGEDG  867 (894)
Q Consensus       815 ~~as~d~~-------g~~~I~vwd~~tg~~--l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg  867 (894)
                      ++++.+..       +...|++||+..++.  +..+.+|...|.+++|+|||++|++++.|.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          232 VFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            98887642       223699999998866  444558889999999999999999887664

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.89  E-value=2e-21  Score=236.11  Aligned_cols=338  Identities=11%  Similarity=0.044  Sum_probs=210.2

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEecCCCeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGREL-ESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM  490 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~  490 (894)
                      |..+.|+  |+.+++++.|+ | +||+.+|+.+ ..+..+..  +. ..++.+...     .......|.+++|+|| ++
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~--~~-~~l~~~~~~-----~~~~~~~v~~~~~spd-~~   94 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAAD--LN-ALMPEGCKF-----QTTDAFPSFRTLDAGR-GL   94 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHH--HH-TTC----------------CCCEEEEETTT-TE
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhH--hh-hhccchhcc-----ccccccCceeEEECCC-Ce
Confidence            5557888  66677777787 8 9999999873 44433321  00 000111000     0000026889999999 66


Q ss_pred             EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-----cce
Q psy10063        491 FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-----EEE  565 (894)
Q Consensus       491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-----~~~  565 (894)
                      |+.+. ++.|++||+.++++.....+...+.+++|+|||++|+++. ++.              |++||+..     ++.
T Consensus        95 ~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-~~~--------------i~v~~~~~~~~~~g~~  158 (706)
T 2z3z_A           95 VVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR-NHN--------------LYIARGGKLGEGMSRA  158 (706)
T ss_dssp             EEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE-TTE--------------EEEEECBCTTSCCCCC
T ss_pred             EEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE-CCe--------------EEEEecCcccccCCCc
Confidence            66553 5999999999998887777778899999999999999864 443              88999888     776


Q ss_pred             EEEccCCCCC--------------eEEEEEecCCCEEEEEe---------------------------------CCCcEE
Q psy10063        566 FARIKGHFGP--------------INSLAFHPDGKSYASGG---------------------------------EDGFLI  598 (894)
Q Consensus       566 ~~~l~~h~~~--------------V~~l~~spdg~~l~sgs---------------------------------~Dg~I~  598 (894)
                      .+....+...              +.+++|+|||++|++++                                 .+..|+
T Consensus       159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~  238 (706)
T 2z3z_A          159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG  238 (706)
T ss_dssp             EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred             EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence            6655444443              48999999999999987                                 446789


Q ss_pred             EEECCCCcccc------CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhh
Q psy10063        599 SNTLSNGLDIS------EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMAR  672 (894)
Q Consensus       599 vwdl~~~~~~~------~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~  672 (894)
                      +||++.++...      ....+..++|+|||+.++...     ...               ......|.+|+..      
T Consensus       239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~-----~~~---------------~~~~~~v~~~d~~------  292 (706)
T 2z3z_A          239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE-----VNR---------------AQNECKVNAYDAE------  292 (706)
T ss_dssp             EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE-----ECT---------------TSCEEEEEEEETT------
T ss_pred             EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE-----eCC---------------CCCeeEEEEEECC------
Confidence            99988775321      223456777777776552110     000               0001122222211      


Q ss_pred             hcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccC-cccccCCC
Q psy10063        673 NRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEG-TPFKLDGS  751 (894)
Q Consensus       673 ~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g-~~~~~dg~  751 (894)
                                                                                           .+ ....+.. 
T Consensus       293 ---------------------------------------------------------------------~g~~~~~~~~-  302 (706)
T 2z3z_A          293 ---------------------------------------------------------------------TGRFVRTLFV-  302 (706)
T ss_dssp             ---------------------------------------------------------------------TCCEEEEEEE-
T ss_pred             ---------------------------------------------------------------------CCceeeEEEE-
Confidence                                                                                 00 0000000 


Q ss_pred             CcceecCCCCceEEEeeCC--CCCEEEEecCCCcEEEEEcc-CCceeeccccC---CCc-eEeecCCCeEEEEecCCC-C
Q psy10063        752 DTPILAGPVDIGFKMPEPP--KREKLALALADKVSERYRDR-KNKATAGFLLS---CPD-FLFDFDTTREVTTTSTKV-G  823 (894)
Q Consensus       752 ~~~~~~~h~~~v~~la~sp--dg~~Latgs~Dg~I~iwd~~-~~~~~~~~~~~---~~~-~~fS~dg~~l~~as~d~~-g  823 (894)
                        .........+.+++|+|  ||++|++++.|+.++||++. .++.+..+..+   +.. ++|++||++|++++.+.. .
T Consensus       303 --~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~  380 (706)
T 2z3z_A          303 --ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL  380 (706)
T ss_dssp             --EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred             --ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence              00000011234678999  99999999999999999876 45544444332   223 679999999887776532 1


Q ss_pred             ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC----CcEEEEecCccc
Q psy10063        824 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED----GFVRLHTFDQAY  878 (894)
Q Consensus       824 ~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D----g~V~vWdl~~~~  878 (894)
                      ...|++||+.+++ +..+. |...|.+++|||||++|+..+.+    +.|++|++++++
T Consensus       381 ~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          381 ERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             CBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             eEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            2368888888766 33443 67789999999999988876443    569999998876

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.88  E-value=2e-21  Score=237.44  Aligned_cols=167  Identities=9%  Similarity=0.021  Sum_probs=124.5

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      |.+++|||||++|++++. +.|++||+.+++  .+..+..|..                         .+.+++|+|||+
T Consensus       111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~-------------------------~~~~~~~SPDG~  164 (741)
T 2ecf_A          111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEG-------------------------FATDAKLSPKGG  164 (741)
T ss_dssp             SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSS-------------------------CEEEEEECTTSS
T ss_pred             cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCc-------------------------ccccccCCCCCC
Confidence            789999999999999986 899999999873  3445566655                         577788888888


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCCCC-----------------eeEEEEcCCCCEEEEEECCCC-eEEEe------
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTERP-----------------VNSAALSPILPHVVLGGGQEA-REVTT------  545 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~-----------------v~~l~~spdg~~l~~~~~~~~-~~v~~------  545 (894)
                      +|++++ ++.|++||+..+++.+....+..                 +.+++|+|||++|++++.++. +..|.      
T Consensus       165 ~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p  243 (741)
T 2ecf_A          165 FVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYA  243 (741)
T ss_dssp             EEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECS
T ss_pred             EEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCC
Confidence            888877 46899999999887765543322                 478999999999999876542 11111      


Q ss_pred             ---------c---cCccceeeEEEEeccc-cceEEEcc--CCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEECCCC
Q psy10063        546 ---------T---STKVGKFDARFYHLIF-EEEFARIK--GHFGPINSLAFHPDGKSYASGGE-----DGFLISNTLSNG  605 (894)
Q Consensus       546 ---------~---~~~~~~~~v~vwd~~~-~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~-----Dg~I~vwdl~~~  605 (894)
                               +   ........|++||+.. ++......  .|...+.+++| |||++|++++.     +..|++||+.++
T Consensus       244 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g  322 (741)
T 2ecf_A          244 DRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN  322 (741)
T ss_dssp             SCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred             CcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence                     0   0111233588999988 77665543  47788999999 99999987754     567999999876


Q ss_pred             c
Q psy10063        606 L  606 (894)
Q Consensus       606 ~  606 (894)
                      +
T Consensus       323 ~  323 (741)
T 2ecf_A          323 Q  323 (741)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.87  E-value=1.9e-20  Score=209.66  Aligned_cols=308  Identities=10%  Similarity=-0.048  Sum_probs=200.6

Q ss_pred             cCCCeEEEEEecCCCCEEE-----EEEccCCCEEEEecC-CC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEE
Q psy10063        396 NAEPVVKMQVTDQSAKITS-----LLWGNLDQYIITGHA-KG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMF  467 (894)
Q Consensus       396 ~~~~~~~~~l~~H~~~V~~-----l~~spdg~~L~sgs~-Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~l  467 (894)
                      .........+..|...+..     ++|||||++|++++. ++  .|.+||+.+++..+...++..               
T Consensus        17 ~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~---------------   81 (388)
T 3pe7_A           17 ASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD---------------   81 (388)
T ss_dssp             TTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---------------
T ss_pred             CCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---------------
Confidence            3334445567788877777     899999999998877 66  488999999988776666654               


Q ss_pred             EEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCC-eeEE--EEcCCCCEEEEEECCCCeEE-
Q psy10063        468 ITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERP-VNSA--ALSPILPHVVLGGGQEAREV-  543 (894)
Q Consensus       468 a~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~-v~~l--~~spdg~~l~~~~~~~~~~v-  543 (894)
                                .+.+++|+|||++|+.++.++.|++||+.+++....+..... +...  .++++|++|+....++.... 
T Consensus        82 ----------~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~  151 (388)
T 3pe7_A           82 ----------NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP  151 (388)
T ss_dssp             ----------CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred             ----------CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence                      344667889999999999889999999999998877775433 4333  45899998875432111000 


Q ss_pred             ---Ee----ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCC------cEEEEECCCCcccc
Q psy10063        544 ---TT----TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDG------FLISNTLSNGLDIS  609 (894)
Q Consensus       544 ---~~----~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg------~I~vwdl~~~~~~~  609 (894)
                         |.    .........|.+||+..++.. .+..+...+..++|+| ||++|+.+..++      .|.+|+++.+..  
T Consensus       152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--  228 (388)
T 3pe7_A          152 LTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM--  228 (388)
T ss_dssp             CCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--
T ss_pred             ccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--
Confidence               00    000112235899999988654 4445677899999999 999888877532      344444322110  


Q ss_pred             CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeecc
Q psy10063        610 EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPF  689 (894)
Q Consensus       610 ~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~  689 (894)
                                                                                                      
T Consensus       229 --------------------------------------------------------------------------------  228 (388)
T 3pe7_A          229 --------------------------------------------------------------------------------  228 (388)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCC--CceEEEe
Q psy10063        690 DEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPV--DIGFKMP  767 (894)
Q Consensus       690 ~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~--~~v~~la  767 (894)
                                                                                      ..+..+.  ..+..++
T Consensus       229 ----------------------------------------------------------------~~l~~~~~~~~~~~~~  244 (388)
T 3pe7_A          229 ----------------------------------------------------------------RKVKTHAEGESCTHEF  244 (388)
T ss_dssp             ----------------------------------------------------------------EESCCCCTTEEEEEEE
T ss_pred             ----------------------------------------------------------------EEeeeCCCCcccccce
Confidence                                                                            0000011  1345678


Q ss_pred             eCCCCCEEEEecC-CC----cEEEEEccCCcee--ecccc------CCCceEeecCCCeEEEEecCC-----CCceeEEE
Q psy10063        768 EPPKREKLALALA-DK----VSERYRDRKNKAT--AGFLL------SCPDFLFDFDTTREVTTTSTK-----VGKFDARF  829 (894)
Q Consensus       768 ~spdg~~Latgs~-Dg----~I~iwd~~~~~~~--~~~~~------~~~~~~fS~dg~~l~~as~d~-----~g~~~I~v  829 (894)
                      |+|||++|+..+. ++    .|++||+..++..  ..+..      .....+|+|||++|++...++     .+...|++
T Consensus       245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~  324 (388)
T 3pe7_A          245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV  324 (388)
T ss_dssp             ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred             ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence            9999988765433 22    3999999887642  22211      134457999999998765331     23346999


Q ss_pred             eecCCcceeeeccCCCC-----------CeeEEEEeeCCcEEEEec-CCCcEEEEecCc
Q psy10063        830 YHLIFEEEFARIKGHFG-----------PINSLAFHPDGKSYASGG-EDGFVRLHTFDQ  876 (894)
Q Consensus       830 wd~~tg~~l~~l~gH~~-----------~V~~l~fSpdg~~LaS~s-~Dg~V~vWdl~~  876 (894)
                      ||+.+++. ..+..|..           .+.+++|+|||++|+.++ .+|...||.++-
T Consensus       325 ~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l  382 (388)
T 3pe7_A          325 FNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL  382 (388)
T ss_dssp             EETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred             EeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence            99998765 44555655           578899999999887655 577777776643

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.87  E-value=2.4e-20  Score=226.72  Aligned_cols=167  Identities=10%  Similarity=0.057  Sum_probs=122.6

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ..|.+++|||| ++|+.+. ++.|+|||+.+++..... .+..                         .+.+++|+|||+
T Consensus        82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~-~~~~-------------------------~~~~~~~SpdG~  133 (706)
T 2z3z_A           82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLF-DTNE-------------------------ETASLDFSPVGD  133 (706)
T ss_dssp             CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEE-CCTT-------------------------CCTTCEECTTSS
T ss_pred             cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEcc-CCcc-------------------------cccCCcCCCCCC
Confidence            56999999999 6655553 589999999988765544 3444                         466778888888


Q ss_pred             EEEEEECCCCEEEEEcCC-----CcEEEEEeCCCC---------------eeEEEEcCCCCEEEEEECCCC-eEEEecc-
Q psy10063        490 MFITASKDHTAKLFTTHD-----RQLLKTYTTERP---------------VNSAALSPILPHVVLGGGQEA-REVTTTS-  547 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~-----~~~~~~~~~~~~---------------v~~l~~spdg~~l~~~~~~~~-~~v~~~~-  547 (894)
                      +|+++ .|+.|++||+..     ++..+.......               +.+++|+|||++|++++.+.. +..+... 
T Consensus       134 ~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~  212 (706)
T 2z3z_A          134 RVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD  212 (706)
T ss_dssp             EEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEE
T ss_pred             EEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeec
Confidence            88885 679999999998     877765544322               589999999999999873321 1111100 


Q ss_pred             -----------------CccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECC
Q psy10063        548 -----------------TKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLS  603 (894)
Q Consensus       548 -----------------~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~  603 (894)
                                       .......|++||+..++......  .|...+.+++|+|||++|++++.++     .|++||+.
T Consensus       213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~  292 (706)
T 2z3z_A          213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE  292 (706)
T ss_dssp             CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT
T ss_pred             cCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC
Confidence                             01133459999999887655442  4677899999999999999887775     89999998


Q ss_pred             CC
Q psy10063        604 NG  605 (894)
Q Consensus       604 ~~  605 (894)
                      ++
T Consensus       293 ~g  294 (706)
T 2z3z_A          293 TG  294 (706)
T ss_dssp             TC
T ss_pred             CC
Confidence            76

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.87  E-value=1.6e-19  Score=197.51  Aligned_cols=183  Identities=10%  Similarity=0.013  Sum_probs=125.5

Q ss_pred             ccCccEEEecC-CCeEEEEEecCCCCEEEEEEccCCCEEEEecC-CCcEEEEecCCCeE-EEEecCCCCCCeeEEEEcCC
Q psy10063        387 SPAARKLATNA-EPVVKMQVTDQSAKITSLLWGNLDQYIITGHA-KGDICTWDLRMGRE-LESISGHAKEPINDMQFSKD  463 (894)
Q Consensus       387 s~dg~~l~~~~-~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~-~~~l~~h~~~~V~~v~~spd  463 (894)
                      +.++++.+... ...+...+..+...+ +++|+|||++|++++. ++.|++||+.+++. ...+..+..           
T Consensus        17 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------   84 (331)
T 3u4y_A           17 QHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS-----------   84 (331)
T ss_dssp             GGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS-----------
T ss_pred             cCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC-----------
Confidence            33444433332 234444455566667 9999999997766655 88999999999887 666665554           


Q ss_pred             CCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC---CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC-C
Q psy10063        464 ATMFITASHSQAVEPINDMQFSKDATMFITASKDH---TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ-E  539 (894)
Q Consensus       464 g~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg---~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~-~  539 (894)
                                    .+.+++|+|+|++|+++..++   .|++||+..++++..+.....+.+++|+|+|++|++++.+ +
T Consensus        85 --------------~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~  150 (331)
T 3u4y_A           85 --------------SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSA  150 (331)
T ss_dssp             --------------CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTT
T ss_pred             --------------CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCC
Confidence                          333478888888888544442   8999999999999998888888999999999977776544 5


Q ss_pred             C-eEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10063        540 A-REVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNG  605 (894)
Q Consensus       540 ~-~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~  605 (894)
                      . +.+|.++....     +.+..    ...+ .+...+.+++|+|||++|+.++ .++.|++||++.+
T Consensus       151 ~~i~~~~~~~~g~-----~~~~~----~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  208 (331)
T 3u4y_A          151 NTVRRFKIDADGV-----LFDTG----QEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP  208 (331)
T ss_dssp             TEEEEEEECTTCC-----EEEEE----EEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred             ceEEEEEECCCCc-----EeecC----Cccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence            5 44444432211     11111    1112 3345689999999999665554 6889999998654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.87  E-value=3.2e-20  Score=204.09  Aligned_cols=309  Identities=11%  Similarity=-0.000  Sum_probs=197.5

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-
Q psy10063        414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI-  492 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~-  492 (894)
                      +++++++++++++++.++.|++||+.+++.++.+..+...                        .+..++|+|+|++|+ 
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~------------------------~~~~~~~s~dg~~~~v   59 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF------------------------GPGTAMMAPDNRTAYV   59 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCC------------------------SSCEEEECTTSSEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCC------------------------CCceeEECCCCCEEEE
Confidence            4567888999999999999999999999998888755410                        255677788887654 


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeCCC-------CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTTER-------PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE  565 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~~~-------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~  565 (894)
                      ++..++.|++||+.+++.+..+....       .+.+++|+|+|++|++++.+...  +........-.|.+||+..++.
T Consensus        60 ~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~~~~~~~~~i~~~d~~~~~~  137 (349)
T 1jmx_B           60 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQR--LNDHYVVKPPRLEVFSTADGLE  137 (349)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEE--CSSCEEECCCEEEEEEGGGGGG
T ss_pred             EeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccc--cccccccCCCeEEEEECCCccc
Confidence            44568899999999999988877533       27899999999999998854000  0000000001388999988543


Q ss_pred             E---EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        566 F---ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       566 ~---~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      .   ..+. +...+.+++|+|||+ |+.++.  .|++||+..++.+.                         .+......
T Consensus       138 ~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~-------------------------~~~~~~~~  188 (349)
T 1jmx_B          138 AKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTV-------------------------ALPLRNWN  188 (349)
T ss_dssp             BCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEE-------------------------EECSTTCC
T ss_pred             cceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceec-------------------------cccccccC
Confidence            3   3333 334688999999999 555543  49999987654221                         00000000


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                      .+   ..  .   ....+                                                              
T Consensus       189 ~~---~~--~---~~~~~--------------------------------------------------------------  198 (349)
T 1jmx_B          189 RK---GY--S---APDVL--------------------------------------------------------------  198 (349)
T ss_dssp             CT---TB--C---CCBCC--------------------------------------------------------------
T ss_pred             Cc---cc--c---Cccce--------------------------------------------------------------
Confidence            00   00  0   00000                                                              


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC-----------CEEEEecCCCcEEEEEccC
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR-----------EKLALALADKVSERYRDRK  791 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg-----------~~Latgs~Dg~I~iwd~~~  791 (894)
                                   .+|..         +.....+    ....++++++++           .++.....++.+++|+...
T Consensus       199 -------------~~~~~---------~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (349)
T 1jmx_B          199 -------------YFWPH---------QSPRHEF----SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD  252 (349)
T ss_dssp             -------------CCCCC---------CCTTCEE----EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE
T ss_pred             -------------eeecC---------CCcceeE----EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc
Confidence                         00000         0000000    011223333332           2333455566777776532


Q ss_pred             CceeeccccCCCceEeec-CCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        792 NKATAGFLLSCPDFLFDF-DTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       792 ~~~~~~~~~~~~~~~fS~-dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                            .......++|++ ||++++++  ++    .|++||+++++.+..+..+ ..+.+++|++||++|++++.|+.|+
T Consensus       253 ------~~~~~~~~~~sp~dg~~l~~~--~~----~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~  319 (349)
T 1jmx_B          253 ------LTELYFTGLRSPKDPNQIYGV--LN----RLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA  319 (349)
T ss_dssp             ------CSSCEEEEEECSSCTTEEEEE--ES----EEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred             ------CCCcceeeEecCCCCCEEEEE--cC----eEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence                  222344678999 99999888  32    5999999999988777643 3577999999999999899999999


Q ss_pred             EEecCccccccccccC
Q psy10063        871 LHTFDQAYFDYTFDIS  886 (894)
Q Consensus       871 vWdl~~~~~~~~~~~~  886 (894)
                      |||++.++.+..+.++
T Consensus       320 v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          320 VFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             EEETTTTEEEEEEECS
T ss_pred             EEeccccceeeeeecC
Confidence            9999999888887765

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.86  E-value=3.1e-21  Score=235.12  Aligned_cols=319  Identities=12%  Similarity=0.053  Sum_probs=200.9

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      +++|+|||++++++ .|+.|++||+.++++...+.++.. .       .              ..|.+++|||||++|++
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~-~-------~--------------~~~~~~~~SpDg~~la~   76 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTM-K-------S--------------VNASNYGLSPDRQFVYL   76 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHH-H-------T--------------TTCSEEEECTTSSEEEE
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccc-c-------c--------------cceeeEEECCCCCeEEE
Confidence            67899999766655 589999999999998777765532 0       0              02556666677777666


Q ss_pred             EEC---------CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        494 ASK---------DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       494 gs~---------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      ++.         ++.|++||+.+++++........+.+++|||||++|+++.. +.              |++|++..++
T Consensus        77 ~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~-~~--------------i~~~~~~~g~  141 (719)
T 1z68_A           77 ESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ-NN--------------IYLKQRPGDP  141 (719)
T ss_dssp             EEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEET-TE--------------EEEESSTTSC
T ss_pred             EecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEEC-Ce--------------EEEEeCCCCC
Confidence            654         68999999999887321222457889999999999999863 33              8899988877


Q ss_pred             eEEEc-cCCCCCe-----------------EEEEEecCCCEEEEEeCC-CcEEEEECCCCccccCCCceeeeEECcCCcE
Q psy10063        565 EFARI-KGHFGPI-----------------NSLAFHPDGKSYASGGED-GFLISNTLSNGLDISEGSFTSSSTQQPDGLV  625 (894)
Q Consensus       565 ~~~~l-~~h~~~V-----------------~~l~~spdg~~l~sgs~D-g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~  625 (894)
                      +.+.. .++...|                 .+++|+|||++|++++.| +.+.+|.+..... ..               
T Consensus       142 ~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~-~~---------------  205 (719)
T 1z68_A          142 PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGD-EQ---------------  205 (719)
T ss_dssp             CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCS-SS---------------
T ss_pred             cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCC-CC---------------
Confidence            65433 2333222                 489999999999998765 4555664421110 00               


Q ss_pred             EEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeE
Q psy10063        626 YPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEM  705 (894)
Q Consensus       626 l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~  705 (894)
                          ......+.+...          |.......+.+|+........                                 
T Consensus       206 ----~~~~~~~~yp~~----------g~~~~~~~l~~~d~~~~~~~~---------------------------------  238 (719)
T 1z68_A          206 ----YPRTINIPYPKA----------GAKNPVVRIFIIDTTYPAYVG---------------------------------  238 (719)
T ss_dssp             ----SCEEEEEECCBT----------TSCCCEEEEEEEESSCHHHHC---------------------------------
T ss_pred             ----CccceeecCCCC----------CCCCCeeEEEEEECCCCCccc---------------------------------
Confidence                001111111000          000011223333322111000                                 


Q ss_pred             EeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC----
Q psy10063        706 ARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD----  781 (894)
Q Consensus       706 ~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D----  781 (894)
                                                             ...+.  ....+.+|...+..++|+||++++++....    
T Consensus       239 ---------------------------------------~~~~~--~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~  277 (719)
T 1z68_A          239 ---------------------------------------PQEVP--VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNV  277 (719)
T ss_dssp             ---------------------------------------CEECC--CCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTE
T ss_pred             ---------------------------------------eeEcc--CCccCCCCcceEEEeEEeCCCeEEEEEeccccCe
Confidence                                                   00000  001134567778999999998877764332    


Q ss_pred             CcEEEEE----ccCCceeecc-------ccCCC-----ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC
Q psy10063        782 KVSERYR----DRKNKATAGF-------LLSCP-----DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF  845 (894)
Q Consensus       782 g~I~iwd----~~~~~~~~~~-------~~~~~-----~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~  845 (894)
                      ..|++||    +..++.....       ...+.     .++|++||+.++....+..|...|++||+..++ ...+..+.
T Consensus       278 ~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~  356 (719)
T 1z68_A          278 SVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGK  356 (719)
T ss_dssp             EEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSS
T ss_pred             EEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCc
Confidence            2488888    6665543222       12233     678999999988866666666789999998776 45666777


Q ss_pred             CCeeEEEEeeCCcEEEEecCC-----CcEEEEecCc
Q psy10063        846 GPINSLAFHPDGKSYASGGED-----GFVRLHTFDQ  876 (894)
Q Consensus       846 ~~V~~l~fSpdg~~LaS~s~D-----g~V~vWdl~~  876 (894)
                      ..|..+.|+ |+++|+..+.+     +.++||.++.
T Consensus       357 ~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~  391 (719)
T 1z68_A          357 WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI  391 (719)
T ss_dssp             SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred             eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence            778888888 88877766554     8899998763

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.86  E-value=3.8e-19  Score=194.78  Aligned_cols=162  Identities=10%  Similarity=0.095  Sum_probs=121.0

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCC-CcEEEEecC--CCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAK-GDICTWDLR--MGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~D-g~I~iWd~~--tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      +....|...+.+++|+|+|++|++++.+ +.|++|++.  .++.  +..+..+.                          
T Consensus        31 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--------------------------   84 (343)
T 1ri6_A           31 TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG--------------------------   84 (343)
T ss_dssp             EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS--------------------------
T ss_pred             eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC--------------------------
Confidence            3445688899999999999988888776 899999997  5543  33443322                          


Q ss_pred             ceEEEEEecCCCEEEEEEC-CCCEEEEEcC---CCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCccce
Q psy10063        478 PINDMQFSKDATMFITASK-DHTAKLFTTH---DRQLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~-Dg~V~iwdl~---~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~  552 (894)
                      .+.+++|+|+|++|++++. ++.|++||+.   .++.+..+.....+.+++|+|+|++|++++ .++.            
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~------------  152 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR------------  152 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTE------------
T ss_pred             CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCE------------
Confidence            4677888888887776665 7889999994   445566666677899999999999999887 5554            


Q ss_pred             eeEEEEeccc-cceEE----EccC-CCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCC
Q psy10063        553 FDARFYHLIF-EEEFA----RIKG-HFGPINSLAFHPDGKSYASGG-EDGFLISNTLSN  604 (894)
Q Consensus       553 ~~v~vwd~~~-~~~~~----~l~~-h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~  604 (894)
                        |++||+.. ++...    .+.. ....+.+++|+|+|++|+.++ .++.|++|+++.
T Consensus       153 --v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~  209 (343)
T 1ri6_A          153 --ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD  209 (343)
T ss_dssp             --EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred             --EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence              77888776 54322    2222 334788999999999776555 789999999853

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.86  E-value=1.3e-20  Score=223.85  Aligned_cols=266  Identities=11%  Similarity=0.023  Sum_probs=187.0

Q ss_pred             CCCEEEEEEccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCC-CCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        409 SAKITSLLWGNLDQYIITGHA-KGDICTWDLRMGRELESISGHA-KEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~-~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      ...|.+++|+|||++||+++. ||.++||++..++..+ +..|. .                         .|.+++|+|
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~-------------------------~~~~~~~sp   74 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPIN-------------------------SVLDPHYGV   74 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCS-------------------------EECEECTTC
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eeccccc-------------------------ccccccCCC
Confidence            567999999999999999887 9999999997666544 44444 4                         466667777


Q ss_pred             CCCEEEEEEC---CCCEEEEEcCC---CcEEEEEeCCCCeeEEEEcCCCCEEEEE-ECCCCeEEEeccCccceeeEEEEe
Q psy10063        487 DATMFITASK---DHTAKLFTTHD---RQLLKTYTTERPVNSAALSPILPHVVLG-GGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       487 dg~~L~sgs~---Dg~V~iwdl~~---~~~~~~~~~~~~v~~l~~spdg~~l~~~-~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      | ++|++++.   +...+||.+..   +... .+.....+..++|+|+|+.++.. +..+.              +.+||
T Consensus        75 d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~--------------~~l~d  138 (582)
T 3o4h_A           75 G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDR--------------VALYA  138 (582)
T ss_dssp             S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSC--------------EEEEE
T ss_pred             C-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCC--------------ceEEE
Confidence            7 55665554   45556655432   3333 44444456678999999754443 33343              55899


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED----GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +..++.......+.   .+++|+|||++|++++.+    +.|++||+++++.                            
T Consensus       139 ~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~----------------------------  187 (582)
T 3o4h_A          139 LDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL----------------------------  187 (582)
T ss_dssp             EETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC----------------------------
T ss_pred             ccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc----------------------------
Confidence            98887665544333   789999999999988776    6788888765421                            


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (582)
T 3o4h_A          188 --------------------------------------------------------------------------------  187 (582)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCC--cEEEEEccCCc
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK--VSERYRDRKNK  793 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg--~I~iwd~~~~~  793 (894)
                                                            ..+..|...+..++|+|||++|+++..++  .|++||+..++
T Consensus       188 --------------------------------------~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~  229 (582)
T 3o4h_A          188 --------------------------------------RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS  229 (582)
T ss_dssp             --------------------------------------EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred             --------------------------------------eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence                                                  01123444567899999999999888888  89999998877


Q ss_pred             eeecccc---CCCceE--------eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEE
Q psy10063        794 ATAGFLL---SCPDFL--------FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYAS  862 (894)
Q Consensus       794 ~~~~~~~---~~~~~~--------fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS  862 (894)
                      .. ....   .+..++        |+|||..++++..++    .++||++  |+++.   .+.+.|.+++|+ ||++|++
T Consensus       230 ~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~  298 (582)
T 3o4h_A          230 VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG----RSAVFID--GERVE---APQGNHGRVVLW-RGKLVTS  298 (582)
T ss_dssp             EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT----EEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEE
T ss_pred             EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC----cEEEEEE--CCeec---cCCCceEEEEec-CCEEEEE
Confidence            65 2221   122455        999996666666665    6999999  76655   344678999999 9999999


Q ss_pred             ecCCC---cEEEEecCc
Q psy10063        863 GGEDG---FVRLHTFDQ  876 (894)
Q Consensus       863 ~s~Dg---~V~vWdl~~  876 (894)
                      ++.+.   .|++|++.+
T Consensus       299 ~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          299 HTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             EEETTEEEEEEEETTCC
T ss_pred             EcCCCCCCeEEEEcCCC
Confidence            88774   467777654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.85  E-value=3.3e-19  Score=196.68  Aligned_cols=244  Identities=8%  Similarity=-0.028  Sum_probs=161.2

Q ss_pred             ceEEEEEecCCCEEEEEEC---CCCEEEEEcCCCcE--EEEE-eCCCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCcc
Q psy10063        478 PINDMQFSKDATMFITASK---DHTAKLFTTHDRQL--LKTY-TTERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKV  550 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~---Dg~V~iwdl~~~~~--~~~~-~~~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~  550 (894)
                      .+..|+|+|||+ |++++.   ++.|++||+..++.  +..+ .+...+..++|+|+|++|++++. ++.          
T Consensus        41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~----------  109 (347)
T 3hfq_A           41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGT----------  109 (347)
T ss_dssp             CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTE----------
T ss_pred             CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCE----------
Confidence            466778888888 554443   68999999987764  3332 24678899999999999999984 454          


Q ss_pred             ceeeEEEEeccc-c--ceEEEccC---------CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeE
Q psy10063        551 GKFDARFYHLIF-E--EEFARIKG---------HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSST  618 (894)
Q Consensus       551 ~~~~v~vwd~~~-~--~~~~~l~~---------h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~  618 (894)
                          |++|++.. +  +.+..+..         +...+.+++|+|||+++++...++.|++|+++....+          
T Consensus       110 ----v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~----------  175 (347)
T 3hfq_A          110 ----AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL----------  175 (347)
T ss_dssp             ----EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE----------
T ss_pred             ----EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE----------
Confidence                66666642 2  22222211         2235889999999996666667889999998621100          


Q ss_pred             ECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEec
Q psy10063        619 QQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELT  698 (894)
Q Consensus       619 ~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s  698 (894)
                                     ..+..                                                            
T Consensus       176 ---------------~~~~~------------------------------------------------------------  180 (347)
T 3hfq_A          176 ---------------SEQSV------------------------------------------------------------  180 (347)
T ss_dssp             ---------------EEEEE------------------------------------------------------------
T ss_pred             ---------------EEeee------------------------------------------------------------
Confidence                           00000                                                            


Q ss_pred             cCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE-
Q psy10063        699 KDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL-  777 (894)
Q Consensus       699 ~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat-  777 (894)
                                                                              +..........++|+|||++|++ 
T Consensus       181 --------------------------------------------------------~~~~~g~~p~~~~~spdg~~l~v~  204 (347)
T 3hfq_A          181 --------------------------------------------------------LTMEAGFGPRHLVFSPDGQYAFLA  204 (347)
T ss_dssp             --------------------------------------------------------EECCTTCCEEEEEECTTSSEEEEE
T ss_pred             --------------------------------------------------------EEcCCCCCCceEEECCCCCEEEEE
Confidence                                                                    00000112456899999996665 


Q ss_pred             ecCCCcEEEEEccC--Cce--eecc---cc------CCCceEeecCCCeEEEEecCCCCceeEEEeecCC---cceeeec
Q psy10063        778 ALADKVSERYRDRK--NKA--TAGF---LL------SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF---EEEFARI  841 (894)
Q Consensus       778 gs~Dg~I~iwd~~~--~~~--~~~~---~~------~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t---g~~l~~l  841 (894)
                      +..++.|++|++..  ++.  +..+   ..      ....++|+|||++|+++.....   .|+||++..   .+.+..+
T Consensus       205 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~---~v~v~~~~~~g~~~~~~~~  281 (347)
T 3hfq_A          205 GELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN---TLAVFAVTADGHLTLIQQI  281 (347)
T ss_dssp             ETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT---EEEEEEECGGGCEEEEEEE
T ss_pred             eCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC---EEEEEEECCCCcEEEeEEE
Confidence            56788999999874  332  1111   11      1335889999999876654322   699999973   2556666


Q ss_pred             cCCCCCeeEEEEeeCCcEEEEecC-CCcEEEEec--Cccccc
Q psy10063        842 KGHFGPINSLAFHPDGKSYASGGE-DGFVRLHTF--DQAYFD  880 (894)
Q Consensus       842 ~gH~~~V~~l~fSpdg~~LaS~s~-Dg~V~vWdl--~~~~~~  880 (894)
                      ..|...+.+|+|+|||++|++++. ++.|.||++  +.+++.
T Consensus       282 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          282 STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence            677778999999999998888765 489999955  445544

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.85  E-value=6.8e-20  Score=195.55  Aligned_cols=224  Identities=13%  Similarity=0.072  Sum_probs=170.8

Q ss_pred             cCccEEEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-CeEEEEecCCCCCCeeEEEEcCCCCE
Q psy10063        388 PAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM-GRELESISGHAKEPINDMQFSKDATM  466 (894)
Q Consensus       388 ~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-g~~~~~l~~h~~~~V~~v~~spdg~~  466 (894)
                      .|+.+.+..........+..|.+.|.+++|+|||++|++++ ++.|++||+.. ++....+..+....|.+++|+|+|++
T Consensus        20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~   98 (297)
T 2ojh_A           20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL   98 (297)
T ss_dssp             CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred             cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence            34444444433333345667999999999999999999987 78999999999 88777776665447899999999999


Q ss_pred             EEEEeCC--CCc------------------cceEEEEEecCCCEEE-EEECCCCEEEEEc--CCCcEEEEEeCCCCeeEE
Q psy10063        467 FITASHS--QAV------------------EPINDMQFSKDATMFI-TASKDHTAKLFTT--HDRQLLKTYTTERPVNSA  523 (894)
Q Consensus       467 la~~~~d--~~i------------------~~V~~l~~spdg~~L~-sgs~Dg~V~iwdl--~~~~~~~~~~~~~~v~~l  523 (894)
                      |++++.+  +..                  ..+.+++|+|+|++|+ +++.++.++||++  ..++......+...+.++
T Consensus        99 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  178 (297)
T 2ojh_A           99 YAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGP  178 (297)
T ss_dssp             EEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEE
T ss_pred             EEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccc
Confidence            9999833  222                  3578889999999887 6778999999985  455554444556789999


Q ss_pred             EEcCCCCEEEEEEC-CCCeEEEeccCccceeeEEEEecc-ccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-------
Q psy10063        524 ALSPILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLI-FEEEFARIKGHFGPINSLAFHPDGKSYASGGED-------  594 (894)
Q Consensus       524 ~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D-------  594 (894)
                      +|+|+|++|++++. ++.              +++|++. .+..+..+..|...+.+++|+|+|++|++++.+       
T Consensus       179 ~~s~dg~~l~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~  244 (297)
T 2ojh_A          179 DYSPDGRWIYFNSSRTGQ--------------MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHP  244 (297)
T ss_dssp             EECTTSSEEEEEECTTSS--------------CEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred             eECCCCCEEEEEecCCCC--------------ccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence            99999999988775 554              5666665 455667788888899999999999999888765       


Q ss_pred             ----CcEEEEECCCCccc------cCCCceeeeEECcCCcEE
Q psy10063        595 ----GFLISNTLSNGLDI------SEGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       595 ----g~I~vwdl~~~~~~------~~~~~v~~~~~spdg~~l  626 (894)
                          +.|++||++.++..      .....+..++|+|+|..+
T Consensus       245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l  286 (297)
T 2ojh_A          245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEF  286 (297)
T ss_dssp             SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEE
T ss_pred             ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEE
Confidence                56999999876532      123456667778877655

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.84  E-value=5.2e-19  Score=194.83  Aligned_cols=246  Identities=11%  Similarity=0.037  Sum_probs=188.5

Q ss_pred             ceEEEEEecCCCEEEEEEC-------CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063        478 PINDMQFSKDATMFITASK-------DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~-------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~  550 (894)
                      .+..++|+|+|++|++++.       ++.|.+||+.+++.+..+.....+.+++|+++|++|+++.....          
T Consensus        42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~----------  111 (353)
T 3vgz_A           42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNS----------  111 (353)
T ss_dssp             SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTT----------
T ss_pred             CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCC----------
Confidence            4677888888887777764       56799999999999999988777899999999998888776543          


Q ss_pred             ceeeEEEEeccccceEEEccCCCCC---------eEEEEEecCCCEEEEEe--CCCcEEEEECCCCccccCCCceeeeEE
Q psy10063        551 GKFDARFYHLIFEEEFARIKGHFGP---------INSLAFHPDGKSYASGG--EDGFLISNTLSNGLDISEGSFTSSSTQ  619 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h~~~---------V~~l~~spdg~~l~sgs--~Dg~I~vwdl~~~~~~~~~~~v~~~~~  619 (894)
                         .|.+||+..++.+..+..+...         +.+++|+|+|++|+.++  .++.|.+||++.++.+.          
T Consensus       112 ---~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~----------  178 (353)
T 3vgz_A          112 ---AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT----------  178 (353)
T ss_dssp             ---EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE----------
T ss_pred             ---EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE----------
Confidence               2889999999988877665432         78899999999877776  47889999986543110          


Q ss_pred             CcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063        620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK  699 (894)
Q Consensus       620 spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~  699 (894)
                                     .                                                                
T Consensus       179 ---------------~----------------------------------------------------------------  179 (353)
T 3vgz_A          179 ---------------A----------------------------------------------------------------  179 (353)
T ss_dssp             ---------------E----------------------------------------------------------------
T ss_pred             ---------------E----------------------------------------------------------------
Confidence                           0                                                                


Q ss_pred             CcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec
Q psy10063        700 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL  779 (894)
Q Consensus       700 ~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs  779 (894)
                                                                              +..+...+.+++|+|++++|++++
T Consensus       180 --------------------------------------------------------~~~~~~~~~~~~~s~dg~~l~~~~  203 (353)
T 3vgz_A          180 --------------------------------------------------------IQNTGKMSTGLALDSEGKRLYTTN  203 (353)
T ss_dssp             --------------------------------------------------------ECCCCTTCCCCEEETTTTEEEEEC
T ss_pred             --------------------------------------------------------ecCCCCccceEEECCCCCEEEEEc
Confidence                                                                    000111234577889999999999


Q ss_pred             CCCcEEEEEccCCceeeccccC-------CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEE
Q psy10063        780 ADKVSERYRDRKNKATAGFLLS-------CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA  852 (894)
Q Consensus       780 ~Dg~I~iwd~~~~~~~~~~~~~-------~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~  852 (894)
                      .++.|.+||...++.+..+...       ...++|+++|++++++.....   .|++||+.+++.+..+..+..  .+++
T Consensus       204 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~---~v~~~d~~~~~~~~~~~~~~~--~~~~  278 (353)
T 3vgz_A          204 ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA---EVLVVDTRNGNILAKVAAPES--LAVL  278 (353)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS---EEEEEETTTCCEEEEEECSSC--CCEE
T ss_pred             CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC---EEEEEECCCCcEEEEEEcCCC--ceEE
Confidence            9999999999988876655431       124789999999888765532   699999999998887775442  5799


Q ss_pred             EeeCCcEEE-EecCCCcEEEEecCccccccccccC
Q psy10063        853 FHPDGKSYA-SGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       853 fSpdg~~La-S~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      |+|||++|+ +...|+.|.+||+..++.+..+...
T Consensus       279 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~  313 (353)
T 3vgz_A          279 FNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP  313 (353)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred             ECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC
Confidence            999998655 4557999999999988877766543

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.5e-20  Score=228.99  Aligned_cols=192  Identities=10%  Similarity=0.017  Sum_probs=128.9

Q ss_pred             eeeeccCccEEEecCCCeE----------EEEEecCCC---CEEEEEEccCCCEEEEecC---------CCcEEEEecCC
Q psy10063        383 LNSMSPAARKLATNAEPVV----------KMQVTDQSA---KITSLLWGNLDQYIITGHA---------KGDICTWDLRM  440 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~~~~----------~~~l~~H~~---~V~~l~~spdg~~L~sgs~---------Dg~I~iWd~~t  440 (894)
                      ...|++||++++...+..+          +..+.+|..   .|.+++|||||++|++++.         |+.|+|||+.+
T Consensus        20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~   99 (719)
T 1z68_A           20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN   99 (719)
T ss_dssp             CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred             ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence            3467777766654433322          223333433   3899999999999998876         78999999999


Q ss_pred             CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC--C
Q psy10063        441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE--R  518 (894)
Q Consensus       441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--~  518 (894)
                      ++.+..... ..                         .+.+++|+|||++|+++. ++.|++||+..+++.+.....  .
T Consensus       100 g~~~~~~~l-~~-------------------------~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~  152 (719)
T 1z68_A          100 GEFVRGNEL-PR-------------------------PIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGREN  152 (719)
T ss_dssp             TEECCSSCC-CS-------------------------SBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTT
T ss_pred             Cccccceec-Cc-------------------------ccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcC
Confidence            886311110 12                         467788888888888875 789999999988876543221  1


Q ss_pred             Ce-----------------eEEEEcCCCCEEEEEECCC-CeEEEecc-------------------CccceeeEEEEecc
Q psy10063        519 PV-----------------NSAALSPILPHVVLGGGQE-AREVTTTS-------------------TKVGKFDARFYHLI  561 (894)
Q Consensus       519 ~v-----------------~~l~~spdg~~l~~~~~~~-~~~v~~~~-------------------~~~~~~~v~vwd~~  561 (894)
                      .|                 .+++|||||++|++++.+. .+.+|.+.                   .......|++||+.
T Consensus       153 ~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~  232 (719)
T 1z68_A          153 KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT  232 (719)
T ss_dssp             TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS
T ss_pred             CeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC
Confidence            12                 4899999999999988653 33333221                   01123368999999


Q ss_pred             ccceE---E-----EccCCCCCeEEEEEecCCCEEEEEeCCC----cEEEEE
Q psy10063        562 FEEEF---A-----RIKGHFGPINSLAFHPDGKSYASGGEDG----FLISNT  601 (894)
Q Consensus       562 ~~~~~---~-----~l~~h~~~V~~l~~spdg~~l~sgs~Dg----~I~vwd  601 (894)
                      .++.+   .     .+.+|...+.+++|+||++++++....+    .|++||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d  284 (719)
T 1z68_A          233 YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD  284 (719)
T ss_dssp             CHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred             CCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence            88753   1     2346888999999999987777644222    366777

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.84  E-value=5.3e-19  Score=193.06  Aligned_cols=271  Identities=11%  Similarity=-0.059  Sum_probs=180.4

Q ss_pred             CEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        411 KITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       411 ~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      .+.+++|+|||++| ++++.++.|++||+.+++.+..+..... ....                   ..+.+++|+|+|+
T Consensus        35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~s~dg~   94 (337)
T 1pby_B           35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-EERV-------------------KSLFGAALSPDGK   94 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT-TEEE-------------------ECTTCEEECTTSS
T ss_pred             CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc-cccc-------------------ccccceEECCCCC
Confidence            58899999999866 4566688999999999998877764221 0000                   0245667777777


Q ss_pred             EEEEEE------------CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        490 MFITAS------------KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       490 ~L~sgs------------~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      +|++++            .++.|++||+.+++.+..+.....+.+++|+|+|++|+++  ++.              |++
T Consensus        95 ~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~--------------i~~  158 (337)
T 1pby_B           95 TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRD--------------LHV  158 (337)
T ss_dssp             EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSS--------------EEE
T ss_pred             EEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCe--------------EEE
Confidence            776665            5799999999999999888877788999999999998888  343              889


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEE--EEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLI--SNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~--vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      ||+..++.+..+..+.. ...+.|+|+|++|+..+.++...  +|......               .+            
T Consensus       159 ~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~---------------~~------------  210 (337)
T 1pby_B          159 MDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKD---------------ID------------  210 (337)
T ss_dssp             EETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTT---------------SC------------
T ss_pred             EECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccc---------------cc------------
Confidence            99999988877765431 11337899998776665544432  22110000               00            


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                 ..... .  ....+.+|+                                                   
T Consensus       211 -----------~~~~~-~--~~~~v~~~d---------------------------------------------------  225 (337)
T 1pby_B          211 -----------PADPT-A--YRTGLLTMD---------------------------------------------------  225 (337)
T ss_dssp             -----------TTSGG-G--EEEEEEEEE---------------------------------------------------
T ss_pred             -----------ccccc-c--cccceEEEe---------------------------------------------------
Confidence                       00000 0  000111111                                                   


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                              ...+...      ...+..+...+.+++|+|++++|+++  ++.|++||+..++.+
T Consensus       226 ------------------------~~~~~~~------~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~  273 (337)
T 1pby_B          226 ------------------------LETGEMA------MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI  273 (337)
T ss_dssp             ------------------------TTTCCEE------EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred             ------------------------CCCCCce------EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence                                    0000000      00112233457789999999999988  799999999988776


Q ss_pred             eccc--cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC
Q psy10063        796 AGFL--LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  846 (894)
Q Consensus       796 ~~~~--~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~  846 (894)
                      ..+.  .....++|++||++++++..++    .|++||+++++.+..+..+.+
T Consensus       274 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~i~v~d~~~~~~~~~~~~~~~  322 (337)
T 1pby_B          274 KRVPLPHSYYSVNVSTDGSTVWLGGALG----DLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             EEEECSSCCCEEEECTTSCEEEEESBSS----EEEEEETTTCCEEEEEECGGG
T ss_pred             ceecCCCceeeEEECCCCCEEEEEcCCC----cEEEEECcCCcEEEEEEcCCC
Confidence            5543  3456788999999999886554    699999999998888775543

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.83  E-value=8.2e-19  Score=214.30  Aligned_cols=381  Identities=11%  Similarity=-0.006  Sum_probs=214.2

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      .....+++|+|||++|+++  |+.|++||+.+|++...+.+|.. .+..+                   ...+++|||||
T Consensus        16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~-~~~~~-------------------~~~~~~~Spdg   73 (740)
T 4a5s_A           16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF-DEFGH-------------------SINDYSISPDG   73 (740)
T ss_dssp             CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT-TTCCS-------------------CCCEEEECTTS
T ss_pred             cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh-hhhcc-------------------cccceEECCCC
Confidence            3446689999999999987  89999999999998888887764 11100                   12335667777


Q ss_pred             CEEEEEECC---------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        489 TMFITASKD---------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       489 ~~L~sgs~D---------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      ++|++++.+         +.+.|||+.++++.....+...+..++|||||++|+.+.. +.              |++|+
T Consensus        74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~-~~--------------i~~~~  138 (740)
T 4a5s_A           74 QFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN-ND--------------IYVKI  138 (740)
T ss_dssp             SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET-TE--------------EEEES
T ss_pred             CEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC-Ce--------------EEEEE
Confidence            777666654         5678999999987765445678999999999999999864 32              88888


Q ss_pred             ccccceEEEc-cCCCCCe-----------------EEEEEecCCCEEEEEeCCCc-EEEEECCCCccc-cCCCceeeeEE
Q psy10063        560 LIFEEEFARI-KGHFGPI-----------------NSLAFHPDGKSYASGGEDGF-LISNTLSNGLDI-SEGSFTSSSTQ  619 (894)
Q Consensus       560 ~~~~~~~~~l-~~h~~~V-----------------~~l~~spdg~~l~sgs~Dg~-I~vwdl~~~~~~-~~~~~v~~~~~  619 (894)
                      +..++..+.. .++...+                 ..+.|||||++|+.++.|.. +++|++...... ........+.+
T Consensus       139 ~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y  218 (740)
T 4a5s_A          139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY  218 (740)
T ss_dssp             STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred             CCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence            8877655422 2332222                 35899999999998876544 888876422111 01223344555


Q ss_pred             CcCCcEEEecCCeEEEEeccc---CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeE
Q psy10063        620 QPDGLVYPSQGGHIHSLSSHS---TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVE  696 (894)
Q Consensus       620 spdg~~l~~~~g~i~~~~~~~---~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  696 (894)
                      .+.|...  ....+..+....   ........+..........-.                                   
T Consensus       219 p~~G~~~--~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------------------------------  261 (740)
T 4a5s_A          219 PKAGAVN--PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY-----------------------------------  261 (740)
T ss_dssp             CBTTSCC--CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE-----------------------------------
T ss_pred             CCCcCcC--CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE-----------------------------------
Confidence            5555321  001233333322   100000011100000000000                                   


Q ss_pred             eccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCc----ccccCCCCcce-ecCCCCceE-----EE
Q psy10063        697 LTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGT----PFKLDGSDTPI-LAGPVDIGF-----KM  766 (894)
Q Consensus       697 ~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~----~~~~dg~~~~~-~~~h~~~v~-----~l  766 (894)
                                ...+.++++|+.+++......   ....|.+|+...|.    +..    ...+ ..+|...|.     .+
T Consensus       262 ----------~~~~~wspdg~~~~~~~~r~~---~~~~i~~~d~~tg~~~~~~~~----~~~l~~~~~~~~v~~~~~~~p  324 (740)
T 4a5s_A          262 ----------LCDVTWATQERISLQWLRRIQ---NYSVMDICDYDESSGRWNCLV----ARQHIEMSTTGWVGRFRPSEP  324 (740)
T ss_dssp             ----------EEEEEEEETTEEEEEEEESST---TEEEEEEEEEETTTTEEEECG----GGCEEEECSSSCSSSSSCCCC
T ss_pred             ----------EEEEEEeCCCeEEEEEeCCCC---CEEEEEEEECCCCccccceeE----EEEeeeccCCceEccCcCCCc
Confidence                      011234444443332211110   01123444333332    000    0001 133444433     67


Q ss_pred             eeCCCCCEEE-Eec-CCC--cEEEEEccCCceeeccccCCCce--EeecCCCeEEEEecC---CCCceeEEEeecCCcce
Q psy10063        767 PEPPKREKLA-LAL-ADK--VSERYRDRKNKATAGFLLSCPDF--LFDFDTTREVTTTST---KVGKFDARFYHLIFEEE  837 (894)
Q Consensus       767 a~spdg~~La-tgs-~Dg--~I~iwd~~~~~~~~~~~~~~~~~--~fS~dg~~l~~as~d---~~g~~~I~vwd~~tg~~  837 (894)
                      +|+|||+.|+ ..+ .+|  .|++|++..++.. .+..+...+  .+++|++.++..+..   ..+...|+..++..++.
T Consensus       325 ~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~  403 (740)
T 4a5s_A          325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK  403 (740)
T ss_dssp             EECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred             eEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence            8999999877 554 344  5888887765443 222222222  245778877766543   23444577777776554


Q ss_pred             eeecc----CCCCCeeEEEEeeCCcEEEEecCC---CcEEEEecCcccccc
Q psy10063        838 FARIK----GHFGPINSLAFHPDGKSYASGGED---GFVRLHTFDQAYFDY  881 (894)
Q Consensus       838 l~~l~----gH~~~V~~l~fSpdg~~LaS~s~D---g~V~vWdl~~~~~~~  881 (894)
                      ...+.    ++...+..+.||+||++++.....   ..+.+++...++.+.
T Consensus       404 ~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~  454 (740)
T 4a5s_A          404 VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLR  454 (740)
T ss_dssp             EEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEE
T ss_pred             ceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEE
Confidence            33343    234678899999999977654332   367888887665433

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.82  E-value=1.4e-17  Score=184.74  Aligned_cols=114  Identities=7%  Similarity=-0.025  Sum_probs=82.8

Q ss_pred             eEEEeeCCCCCEEEEec-CCCcEEEEEccCCce--eecccc------CCCceEeecCCCeEEEEecC-CCCceeEEEeec
Q psy10063        763 GFKMPEPPKREKLALAL-ADKVSERYRDRKNKA--TAGFLL------SCPDFLFDFDTTREVTTTST-KVGKFDARFYHL  832 (894)
Q Consensus       763 v~~la~spdg~~Latgs-~Dg~I~iwd~~~~~~--~~~~~~------~~~~~~fS~dg~~l~~as~d-~~g~~~I~vwd~  832 (894)
                      ...++|+|||++|++++ .++.|++|++..++.  +..+..      ....++|+|||++|+++... ..   .|.||++
T Consensus       213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~---~i~v~~~  289 (361)
T 3scy_A          213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD---GVAIFKV  289 (361)
T ss_dssp             EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC---EEEEEEE
T ss_pred             CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC---EEEEEEE
Confidence            56789999999887766 689999999886543  222211      12378899999999877655 22   5999998


Q ss_pred             C--Ccc--eeeeccCCCCCeeEEEEeeCCcEEEEec-CCCcEEEEecC--ccccc
Q psy10063        833 I--FEE--EFARIKGHFGPINSLAFHPDGKSYASGG-EDGFVRLHTFD--QAYFD  880 (894)
Q Consensus       833 ~--tg~--~l~~l~gH~~~V~~l~fSpdg~~LaS~s-~Dg~V~vWdl~--~~~~~  880 (894)
                      .  .++  .+..+.. ...+.+|+|+|||++|++++ .++.|+||+++  .+++.
T Consensus       290 ~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~  343 (361)
T 3scy_A          290 DETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT  343 (361)
T ss_dssp             CTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             cCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence            5  444  4444444 45788999999999888877 67899997664  55543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.81  E-value=2.3e-17  Score=183.01  Aligned_cols=263  Identities=9%  Similarity=0.005  Sum_probs=173.2

Q ss_pred             CCCCEEEEEEccCCCEEEEecCC----CcEEEEecCC--CeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAK----GDICTWDLRM--GRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~D----g~I~iWd~~t--g~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      |...+..|+|+|||++|++++.+    +.|++|++..  |+.  +..+..+..                         ..
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~-------------------------~p  102 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA-------------------------DP  102 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS-------------------------CE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC-------------------------Cc
Confidence            78889999999999999998875    7999999865  543  233332332                         45


Q ss_pred             EEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEE----EEEeC-----------CCCeeEEEEcCCCCEEEEEEC-CCCeE
Q psy10063        480 NDMQFSKDATMFITAS-KDHTAKLFTTHDRQLL----KTYTT-----------ERPVNSAALSPILPHVVLGGG-QEARE  542 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~----~~~~~-----------~~~v~~l~~spdg~~l~~~~~-~~~~~  542 (894)
                      ..+++  ++++|++++ .++.|.+|++.....+    ..+.+           ...+.+++|+|+|++|++++. ++.  
T Consensus       103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--  178 (361)
T 3scy_A          103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ--  178 (361)
T ss_dssp             EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE--
T ss_pred             EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE--
Confidence            66666  777777766 5789999999754322    22222           123578999999998888775 343  


Q ss_pred             EEeccCccceeeEEEEeccccc-------e------EEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCccc
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEE-------E------FARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDI  608 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~-------~------~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~  608 (894)
                                  |++|++....       .      ......+...+.+++|+|||++|++++ .++.|++|+++.++. 
T Consensus       179 ------------v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~-  245 (361)
T 3scy_A          179 ------------IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML-  245 (361)
T ss_dssp             ------------EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE-
T ss_pred             ------------EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce-
Confidence                        6667655332       1      111223445678999999999887777 689999999853310 


Q ss_pred             cCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeec
Q psy10063        609 SEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNP  688 (894)
Q Consensus       609 ~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~  688 (894)
                                               ..+...                                                 
T Consensus       246 -------------------------~~~~~~-------------------------------------------------  251 (361)
T 3scy_A          246 -------------------------DEIQTV-------------------------------------------------  251 (361)
T ss_dssp             -------------------------EEEEEE-------------------------------------------------
T ss_pred             -------------------------EEeEEE-------------------------------------------------
Confidence                                     000000                                                 


Q ss_pred             cCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEee
Q psy10063        689 FDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPE  768 (894)
Q Consensus       689 ~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~  768 (894)
                                                                                       .....+.....+++|
T Consensus       252 -----------------------------------------------------------------~~~~~~~~~~~~i~~  266 (361)
T 3scy_A          252 -----------------------------------------------------------------AADTVNAQGSGDIHL  266 (361)
T ss_dssp             -----------------------------------------------------------------ESCSSCCCCEEEEEE
T ss_pred             -----------------------------------------------------------------ecCCCCCCCcccEEE
Confidence                                                                             000111223468899


Q ss_pred             CCCCCEEEEecCC--CcEEEEEcc--CCc--eeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEe--ecCCccee
Q psy10063        769 PPKREKLALALAD--KVSERYRDR--KNK--ATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFY--HLIFEEEF  838 (894)
Q Consensus       769 spdg~~Latgs~D--g~I~iwd~~--~~~--~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vw--d~~tg~~l  838 (894)
                      +|||++|+++..+  +.|++|++.  .++  .+..+..  ....++|+|||++|+++..+..   .|.||  |.++|++.
T Consensus       267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~---~v~v~~~d~~~g~~~  343 (361)
T 3scy_A          267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTN---VIQIFERDQATGLLT  343 (361)
T ss_dssp             CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTT---EEEEEEECTTTCCEE
T ss_pred             CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCC---CEEEEEEECCCCcEe
Confidence            9999999776654  889999985  333  2322222  4567899999999998875432   57775  55677765


Q ss_pred             eec-cCCCCCeeEEEEe
Q psy10063        839 ARI-KGHFGPINSLAFH  854 (894)
Q Consensus       839 ~~l-~gH~~~V~~l~fS  854 (894)
                      ... ..|...+.||+|.
T Consensus       344 ~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          344 DIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             ECSCCEECSSEEEEEEE
T ss_pred             ecceeeeCCCCeEEEEc
Confidence            543 2355678899986

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.81  E-value=1.5e-17  Score=183.39  Aligned_cols=160  Identities=15%  Similarity=0.166  Sum_probs=111.1

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecC---CCcEEEEecCCCeE--EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHA---KGDICTWDLRMGRE--LESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~---Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      .+..+...+..|+|+|||+ |++++.   ++.|++||+..++.  +..+..+..                         .
T Consensus        34 ~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~-------------------------~   87 (347)
T 3hfq_A           34 GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGT-------------------------P   87 (347)
T ss_dssp             EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESC-------------------------C
T ss_pred             eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCC-------------------------C
Confidence            4456678889999999999 555543   68999999987763  333333443                         5


Q ss_pred             eEEEEEecCCCEEEEEE-CCCCEEEEEcC-CCc--EEEEEeCC----------CCeeEEEEcCCCCEEEEEEC-CCCeEE
Q psy10063        479 INDMQFSKDATMFITAS-KDHTAKLFTTH-DRQ--LLKTYTTE----------RPVNSAALSPILPHVVLGGG-QEAREV  543 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs-~Dg~V~iwdl~-~~~--~~~~~~~~----------~~v~~l~~spdg~~l~~~~~-~~~~~v  543 (894)
                      +..|+|+|||++|++++ .++.|++||+. .+.  .+..+...          ..+.+++|+|+|+ |+++.. ++.   
T Consensus        88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~---  163 (347)
T 3hfq_A           88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK---  163 (347)
T ss_dssp             CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE---
T ss_pred             CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE---
Confidence            77888888999888887 67899999996 333  33344332          2478999999999 555544 443   


Q ss_pred             EeccCccceeeEEEEecc-ccceE--EEccCC-CCCeEEEEEecCCCEEEE-EeCCCcEEEEECCC
Q psy10063        544 TTTSTKVGKFDARFYHLI-FEEEF--ARIKGH-FGPINSLAFHPDGKSYAS-GGEDGFLISNTLSN  604 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~-~~~~~--~~l~~h-~~~V~~l~~spdg~~l~s-gs~Dg~I~vwdl~~  604 (894)
                                 |++|++. .++..  ..+..+ ...+..++|+|||++|++ +..++.|++|+++.
T Consensus       164 -----------v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~  218 (347)
T 3hfq_A          164 -----------VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT  218 (347)
T ss_dssp             -----------EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             -----------EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence                       7777777 44322  222222 236788999999997666 45678899998753

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.81  E-value=2.4e-18  Score=192.72  Aligned_cols=287  Identities=9%  Similarity=-0.027  Sum_probs=178.4

Q ss_pred             CEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        411 KITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .+.+++|||||++|+.+..+   ..|++||+..++..+...++..                         .+..+.|+||
T Consensus        37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~-------------------------~~~~~~~spd   91 (396)
T 3c5m_A           37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGD-------------------------NTFGGFISTD   91 (396)
T ss_dssp             CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCB-------------------------CTTTCEECTT
T ss_pred             eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCC-------------------------ccccceECCC
Confidence            37888999999998876433   4688999998876544333221                         2233678888


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc----------------Cccc
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTS----------------TKVG  551 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~----------------~~~~  551 (894)
                      |++|+.++.++.|++||+..++....+.....     |+++|++|+....+....+|...                ....
T Consensus        92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~  166 (396)
T 3c5m_A           92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP  166 (396)
T ss_dssp             SSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred             CCEEEEEEcCCcEEEEECCCCCcEEEEecccc-----cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence            88888888888999999999887776664332     44444444433222111111000                0012


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEec-CCCEEEEEeCCC------cEEEEECCCCccccCCCceeeeEECcCCc
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHP-DGKSYASGGEDG------FLISNTLSNGLDISEGSFTSSSTQQPDGL  624 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg------~I~vwdl~~~~~~~~~~~v~~~~~spdg~  624 (894)
                      ...|++||+..++..... .+...+..+.|+| ++++|+.++.++      .|.+|+++.++..                
T Consensus       167 ~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----------------  229 (396)
T 3c5m_A          167 TCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR----------------  229 (396)
T ss_dssp             CEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE----------------
T ss_pred             cceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee----------------
Confidence            234889999887765444 5667889999999 788777665432      2444443221100                


Q ss_pred             EEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCccee
Q psy10063        625 VYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIE  704 (894)
Q Consensus       625 ~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~  704 (894)
                                                                                                      
T Consensus       230 --------------------------------------------------------------------------------  229 (396)
T 3c5m_A          230 --------------------------------------------------------------------------------  229 (396)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCC-CCceEEEeeCCCCCEEEEecCC--
Q psy10063        705 MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGP-VDIGFKMPEPPKREKLALALAD--  781 (894)
Q Consensus       705 ~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h-~~~v~~la~spdg~~Latgs~D--  781 (894)
                                                                       .+.... ...+..++|+|||++|+.++.+  
T Consensus       230 -------------------------------------------------~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~  260 (396)
T 3c5m_A          230 -------------------------------------------------KIKEHAEGESCTHEFWIPDGSAMAYVSYFKG  260 (396)
T ss_dssp             -------------------------------------------------ESSCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred             -------------------------------------------------EeeccCCCccccceEECCCCCEEEEEecCCC
Confidence                                                             000000 1135578899999988776544  


Q ss_pred             ---CcEEEEEccCCceeecc-ccCCCceEeec-CCCeEEEEecC------------CCCceeEEEeecCCcceeeeccCC
Q psy10063        782 ---KVSERYRDRKNKATAGF-LLSCPDFLFDF-DTTREVTTTST------------KVGKFDARFYHLIFEEEFARIKGH  844 (894)
Q Consensus       782 ---g~I~iwd~~~~~~~~~~-~~~~~~~~fS~-dg~~l~~as~d------------~~g~~~I~vwd~~tg~~l~~l~gH  844 (894)
                         +.|++||+..++..... ..... ++|++ ||++++++..+            ..+...|++||+..++. ..+..|
T Consensus       261 ~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~  338 (396)
T 3c5m_A          261 QTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKH  338 (396)
T ss_dssp             TCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEEC
T ss_pred             CccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCC
Confidence               44999998877643211 11222 78999 99988775432            11234699999988765 345555


Q ss_pred             CC-----------CeeEEEEeeCCcEEEEecC-CCcEEEEecC
Q psy10063        845 FG-----------PINSLAFHPDGKSYASGGE-DGFVRLHTFD  875 (894)
Q Consensus       845 ~~-----------~V~~l~fSpdg~~LaS~s~-Dg~V~vWdl~  875 (894)
                      ..           .+..++|+|||++|+.++. ++...||.++
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          339 STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence            44           2567899999998887654 5666666654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.80  E-value=8.5e-18  Score=187.12  Aligned_cols=245  Identities=11%  Similarity=0.037  Sum_probs=165.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcC-CCcEEEEEeC--CCCeeEEEEcCCCCEE--EEEE-------------CCC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTH-DRQLLKTYTT--ERPVNSAALSPILPHV--VLGG-------------GQE  539 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~-~~~~~~~~~~--~~~v~~l~~spdg~~l--~~~~-------------~~~  539 (894)
                      .+..++|+|||++|++++.+ .|.+||+. ++++.....+  .+.+.+++|+|+|++|  +++.             .++
T Consensus        41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g  119 (365)
T 1jof_A           41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG  119 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred             CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence            46778889999988888887 89999997 7877654442  2446779999999963  3332             233


Q ss_pred             CeEEEeccCccceeeEEEEecc-ccceEEEcc----CCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECC-CCccccCCC
Q psy10063        540 AREVTTTSTKVGKFDARFYHLI-FEEEFARIK----GHFGPINSLAFHPDGKSYASGGE-DGFLISNTLS-NGLDISEGS  612 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~-~~~~~~~l~----~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~-~~~~~~~~~  612 (894)
                      .              +++|++. .++....+.    .+...+.+++|+|||++|++++. ++.|++|+++ .++..    
T Consensus       120 ~--------------v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~----  181 (365)
T 1jof_A          120 Y--------------GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE----  181 (365)
T ss_dssp             E--------------EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE----
T ss_pred             e--------------EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE----
Confidence            3              7788876 355443333    25567999999999998887764 6789999985 32100    


Q ss_pred             ceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCc
Q psy10063        613 FTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQ  692 (894)
Q Consensus       613 ~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  692 (894)
                                            .+..                                                      
T Consensus       182 ----------------------~~~~------------------------------------------------------  185 (365)
T 1jof_A          182 ----------------------LVGS------------------------------------------------------  185 (365)
T ss_dssp             ----------------------EEEE------------------------------------------------------
T ss_pred             ----------------------Eeee------------------------------------------------------
Confidence                                  0000                                                      


Q ss_pred             ceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC
Q psy10063        693 QSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR  772 (894)
Q Consensus       693 ~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg  772 (894)
                                                                +                   .+..|...+..++|+|||
T Consensus       186 ------------------------------------------~-------------------~~~~~g~~p~~~~~spdg  204 (365)
T 1jof_A          186 ------------------------------------------V-------------------DAPDPGDHPRWVAMHPTG  204 (365)
T ss_dssp             ------------------------------------------E-------------------ECSSTTCCEEEEEECTTS
T ss_pred             ------------------------------------------E-------------------ecCCCCCCCCEeEECCCC
Confidence                                                      0                   000112346688999999


Q ss_pred             CEEEEecC-CCcEEEEEcc--CCcee------ecccc-------------CCCceE-eecCCCeEEEEecCCCC--ceeE
Q psy10063        773 EKLALALA-DKVSERYRDR--KNKAT------AGFLL-------------SCPDFL-FDFDTTREVTTTSTKVG--KFDA  827 (894)
Q Consensus       773 ~~Latgs~-Dg~I~iwd~~--~~~~~------~~~~~-------------~~~~~~-fS~dg~~l~~as~d~~g--~~~I  827 (894)
                      ++|++++. ++.|.+|++.  +++..      ..+..             ....++ |+|||++|+++......  ...|
T Consensus       205 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i  284 (365)
T 1jof_A          205 NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYI  284 (365)
T ss_dssp             SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEE
T ss_pred             CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeE
Confidence            99887764 6889999865  34331      11111             134678 99999999876543310  1149


Q ss_pred             EEeecC-Ccceee---eccCCCCCeeEEEEee---CCcEEEEecCC-CcEEEEecCccc
Q psy10063        828 RFYHLI-FEEEFA---RIKGHFGPINSLAFHP---DGKSYASGGED-GFVRLHTFDQAY  878 (894)
Q Consensus       828 ~vwd~~-tg~~l~---~l~gH~~~V~~l~fSp---dg~~LaS~s~D-g~V~vWdl~~~~  878 (894)
                      +||++. .|++..   .+..+...+..++|+|   ||++|++++.+ +.|+||+++...
T Consensus       285 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~  343 (365)
T 1jof_A          285 AGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             EEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             EEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence            999996 566543   2334556678899999   89999998865 899999998763

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.79  E-value=2.3e-18  Score=204.36  Aligned_cols=184  Identities=11%  Similarity=0.035  Sum_probs=129.1

Q ss_pred             ceeeeeccCccEEEecCC--CeEE---------EEEecCC-CCEEEEEEccCCCEEEEecC---CCcEEEEecCC---Ce
Q psy10063        381 DRLNSMSPAARKLATNAE--PVVK---------MQVTDQS-AKITSLLWGNLDQYIITGHA---KGDICTWDLRM---GR  442 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~--~~~~---------~~l~~H~-~~V~~l~~spdg~~L~sgs~---Dg~I~iWd~~t---g~  442 (894)
                      ...++|++||+.|++.+.  +.+.         ..+..|. ..|.+++|||| ++|++++.   +...+||.+..   ++
T Consensus        24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~  102 (582)
T 3o4h_A           24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE  102 (582)
T ss_dssp             EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred             hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence            455678999999987543  2222         2344455 68999999999 77877764   45566665533   33


Q ss_pred             EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE-EEEEECCCCEEEEEcCCCcEEEEEeCCCCee
Q psy10063        443 ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM-FITASKDHTAKLFTTHDRQLLKTYTTERPVN  521 (894)
Q Consensus       443 ~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~-L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~  521 (894)
                      .. .+....                          .+..++|+|||+. +++.+.++.+.|||+.++++.....+..  .
T Consensus       103 ~~-~l~~~~--------------------------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~  153 (582)
T 3o4h_A          103 EQ-RLEAVK--------------------------PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F  153 (582)
T ss_dssp             CE-ECTTSC--------------------------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C
T ss_pred             cc-cccCCC--------------------------CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c
Confidence            22 343332                          2334566776643 3334445556699999998877666554  8


Q ss_pred             EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC--cEEE
Q psy10063        522 SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG--FLIS  599 (894)
Q Consensus       522 ~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg--~I~v  599 (894)
                      +++|+|||++|++++.++.          ....|++||+..++.. .+..|.+.+..++|+|||++|+++..++  .|++
T Consensus       154 ~~~~spDG~~la~~~~~~~----------~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~  222 (582)
T 3o4h_A          154 GFVSDIRGDLIAGLGFFGG----------GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVT  222 (582)
T ss_dssp             EEEEEEETTEEEEEEEEET----------TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred             eEEECCCCCEEEEEEEcCC----------CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEE
Confidence            9999999999998776532          1123899999887765 6678889999999999999999888888  7899


Q ss_pred             EECCCC
Q psy10063        600 NTLSNG  605 (894)
Q Consensus       600 wdl~~~  605 (894)
                      ||++++
T Consensus       223 ~d~~~~  228 (582)
T 3o4h_A          223 VDPRDG  228 (582)
T ss_dssp             ECTTTC
T ss_pred             EcCCCC
Confidence            988654

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.78  E-value=5.8e-17  Score=180.05  Aligned_cols=280  Identities=11%  Similarity=0.039  Sum_probs=187.5

Q ss_pred             CCCEEEEec------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        420 LDQYIITGH------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       420 dg~~L~sgs------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      ++++|++..      .|+.|++||..+++.+..+..+..                         +  .|+|+|||++|++
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~-------------------------p--~i~~spdg~~lyv   66 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN-------------------------G--HVQVSNDGKKIYT   66 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE-------------------------E--EEEECTTSSEEEE
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC-------------------------C--ceEECCCCCEEEE
Confidence            556666543      477999999999998888876543                         2  5666677776666


Q ss_pred             EE----------CCCCEEEEEcCCCcEEEEEeC-------CCCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeE
Q psy10063        494 AS----------KDHTAKLFTTHDRQLLKTYTT-------ERPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDA  555 (894)
Q Consensus       494 gs----------~Dg~V~iwdl~~~~~~~~~~~-------~~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v  555 (894)
                      +.          .++.|.+||+.+++++..+..       ......++|+|||++|+++... ..             .|
T Consensus        67 ~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~-------------~v  133 (361)
T 2oiz_A           67 MTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT-------------SI  133 (361)
T ss_dssp             EEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE-------------EE
T ss_pred             EEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC-------------eE
Confidence            65          256799999999999888763       2457889999999999998753 22             28


Q ss_pred             EEEeccccceEEE-ccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeE
Q psy10063        556 RFYHLIFEEEFAR-IKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHI  633 (894)
Q Consensus       556 ~vwd~~~~~~~~~-l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i  633 (894)
                      .+||+..++.+.. +...  ....+.+.|++ ..+++.+.||.+.+|+++...                 +...      
T Consensus       134 ~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g-----------------~~~~------  188 (361)
T 2oiz_A          134 GIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG-----------------KVAS------  188 (361)
T ss_dssp             EEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECTTS-----------------SEEE------
T ss_pred             EEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECCCC-----------------cEee------
Confidence            9999999988887 6432  22346677876 678888999999999875311                 0000      


Q ss_pred             EEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEc
Q psy10063        634 HSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSIN  713 (894)
Q Consensus       634 ~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s  713 (894)
                       .....                     .+++                                                 
T Consensus       189 -~~~~~---------------------~~~~-------------------------------------------------  197 (361)
T 2oiz_A          189 -QSRSK---------------------QMFS-------------------------------------------------  197 (361)
T ss_dssp             -EEECC---------------------CCSC-------------------------------------------------
T ss_pred             -ecccc---------------------ceEc-------------------------------------------------
Confidence             00000                     0000                                                 


Q ss_pred             CCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCc
Q psy10063        714 HSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNK  793 (894)
Q Consensus       714 ~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~  793 (894)
                                                        ..          ... ..+.+++++..++..+.++.|.+||+....
T Consensus       198 ----------------------------------~~----------~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~  232 (361)
T 2oiz_A          198 ----------------------------------VK----------DDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDE  232 (361)
T ss_dssp             ----------------------------------TT----------TSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSS
T ss_pred             ----------------------------------CC----------CCc-eEEEecccCCEEEEEeCCCeEEEEEecCCC
Confidence                                              00          000 001112344444445556667777664332


Q ss_pred             ee--ec-------------cccCCCceEeecCCCeEEEEec-CC------CCceeEEEeecCCcceeeeccCCCCCeeEE
Q psy10063        794 AT--AG-------------FLLSCPDFLFDFDTTREVTTTS-TK------VGKFDARFYHLIFEEEFARIKGHFGPINSL  851 (894)
Q Consensus       794 ~~--~~-------------~~~~~~~~~fS~dg~~l~~as~-d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l  851 (894)
                      ..  ..             ...+...++|++|+++++++.. ++      .+...|.+||+++++.+..+..|.  +.+|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i  310 (361)
T 2oiz_A          233 VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSM  310 (361)
T ss_dssp             CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEE
T ss_pred             ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEE
Confidence            11  10             0112234789999999888754 11      012269999999999999999887  9999


Q ss_pred             EEeeCCcEEEEecCCCcEEEEecCcc--cccccc
Q psy10063        852 AFHPDGKSYASGGEDGFVRLHTFDQA--YFDYTF  883 (894)
Q Consensus       852 ~fSpdg~~LaS~s~Dg~V~vWdl~~~--~~~~~~  883 (894)
                      +|+|||++|++++. +.|.|||.+++  +++..+
T Consensus       311 a~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i  343 (361)
T 2oiz_A          311 TIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI  343 (361)
T ss_dssp             EEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred             EECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence            99999999999887 99999999999  777664

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.78  E-value=8.5e-18  Score=191.55  Aligned_cols=171  Identities=13%  Similarity=0.138  Sum_probs=126.9

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      +...+..|+|++++.+|++++.|+ |+||+............+.. .+  ..+.+.    .....   -..|.+|+|+|+
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~-~~--~~~~~~----~~~~~---~~~v~~l~~spd  103 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPN-KI--VDKVQG----LLVPM---KFPIHHLALSCD  103 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTT-CE--EECCCC----EEECC---SSCEEEEEECTT
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcc-cc--cccCcc----ccccC---CCcccEEEEcCC
Confidence            345689999999999999999887 99988642211100001100 00  001000    00000   026999999999


Q ss_pred             CCEEE----EEECCCCEEEEEcCCC--------cEE---EEEe-CCCCeeEEEEcCC-CCEEEEEECCCCeEEEeccCcc
Q psy10063        488 ATMFI----TASKDHTAKLFTTHDR--------QLL---KTYT-TERPVNSAALSPI-LPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       488 g~~L~----sgs~Dg~V~iwdl~~~--------~~~---~~~~-~~~~v~~l~~spd-g~~l~~~~~~~~~~v~~~~~~~  550 (894)
                      |++|+    +|+.|+.|+|||++.+        +.+   ..+. |...|.+++|+|+ +.+|++++.++.          
T Consensus       104 g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~----------  173 (434)
T 2oit_A          104 NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS----------  173 (434)
T ss_dssp             SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC----------
T ss_pred             CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe----------
Confidence            99999    7888999999998754        222   2233 4678999999998 789999999997          


Q ss_pred             ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        551 GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                          |++||++.+..+....+|...|.+++|+|+|++|++|+.||.|++||++
T Consensus       174 ----v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~  222 (434)
T 2oit_A          174 ----IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT  222 (434)
T ss_dssp             ----EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred             ----EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence                8999999887777777899999999999999999999999999999986

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.78  E-value=9.2e-18  Score=191.28  Aligned_cols=187  Identities=12%  Similarity=0.052  Sum_probs=143.5

Q ss_pred             ccceeeeeccCccEEEecCCCeEEEE-------------------------EecCCCCEEEEEEccCCCEEE----EecC
Q psy10063        379 SVDRLNSMSPAARKLATNAEPVVKMQ-------------------------VTDQSAKITSLLWGNLDQYII----TGHA  429 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~~~~~~-------------------------l~~H~~~V~~l~~spdg~~L~----sgs~  429 (894)
                      ....++++++++.+|+.+..+.+++.                         ...|.+.|.+|+|+|+|++|+    +|+.
T Consensus        37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~  116 (434)
T 2oit_A           37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY  116 (434)
T ss_dssp             SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred             CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence            34566788888888887765544431                         112456799999999999999    8899


Q ss_pred             CCcEEEEecCCC--------e---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC-CCEEEEEECC
Q psy10063        430 KGDICTWDLRMG--------R---ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD-ATMFITASKD  497 (894)
Q Consensus       430 Dg~I~iWd~~tg--------~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd-g~~L~sgs~D  497 (894)
                      |+.|+|||+..+        +   .+..+.+|..                         .|.+|+|+|+ +.+|++++.|
T Consensus       117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~v~~~p~~~~~las~s~D  171 (434)
T 2oit_A          117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-------------------------MVIDMKWNPTVPSMVAVCLAD  171 (434)
T ss_dssp             EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-------------------------SEEEEEECSSCTTEEEEEETT
T ss_pred             CceEEEEEccccccCCcCCcceeeeeeccCCCCC-------------------------ceEEEEECCCCCCEEEEEECC
Confidence            999999998754        1   1344455665                         7888888887 8899999999


Q ss_pred             CCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC----
Q psy10063        498 HTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH----  572 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h----  572 (894)
                      |.|+|||++.++.+.... |...|.+++|+|+|++|++++.++.              |++||++ ++....+..|    
T Consensus       172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~--------------v~iwd~~-~~~~~~~~~~~~~~  236 (434)
T 2oit_A          172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT--------------VVQYLPT-LQEKKVIPCPPFYE  236 (434)
T ss_dssp             SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC--------------EEEECTT-CCEEEEECCCTTCC
T ss_pred             CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc--------------EEEEccC-CcccccccCCcccC
Confidence            999999999987665444 4688999999999999999999997              7888887 5555555433    


Q ss_pred             ---CCCeEEEEEecCCCEEEEE-eCCCc------EEEEECCCC
Q psy10063        573 ---FGPINSLAFHPDGKSYASG-GEDGF------LISNTLSNG  605 (894)
Q Consensus       573 ---~~~V~~l~~spdg~~l~sg-s~Dg~------I~vwdl~~~  605 (894)
                         ...|.+++|++++.+|++. ..||.      +++|++...
T Consensus       237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence               3389999999988877543 34433      899999764

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.77  E-value=1.8e-16  Score=193.55  Aligned_cols=197  Identities=7%  Similarity=-0.089  Sum_probs=136.6

Q ss_pred             eeeeeccCccEEEecCCCeE----------EEEEecCCCC-----EEEEEEccCCCEEEEecCC---------CcEEEEe
Q psy10063        382 RLNSMSPAARKLATNAEPVV----------KMQVTDQSAK-----ITSLLWGNLDQYIITGHAK---------GDICTWD  437 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~~~----------~~~l~~H~~~-----V~~l~~spdg~~L~sgs~D---------g~I~iWd  437 (894)
                      ....|++||++|+.. +..+          ...+.+|...     ...++|||||++|++++.+         +.+.|||
T Consensus        20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d   98 (740)
T 4a5s_A           20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (740)
T ss_dssp             CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence            345788888877765 3222          2345566533     2347899999999998876         5677999


Q ss_pred             cCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC
Q psy10063        438 LRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE  517 (894)
Q Consensus       438 ~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~  517 (894)
                      +.++++. .+..|..                         .+..++|||||++||.++ |+.|++||+..+++.+.....
T Consensus        99 ~~~~~~~-~l~~~~~-------------------------~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g  151 (740)
T 4a5s_A           99 LNKRQLI-TEERIPN-------------------------NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG  151 (740)
T ss_dssp             TTTTEEC-CSSCCCT-------------------------TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC
T ss_pred             CCCCcEE-EcccCCC-------------------------cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC
Confidence            9999854 3555555                         577788888888888874 688999999988765532211


Q ss_pred             --CCe-----------------eEEEEcCCCCEEEEEECCCC-eEEEeccC---------------------ccceeeEE
Q psy10063        518 --RPV-----------------NSAALSPILPHVVLGGGQEA-REVTTTST---------------------KVGKFDAR  556 (894)
Q Consensus       518 --~~v-----------------~~l~~spdg~~l~~~~~~~~-~~v~~~~~---------------------~~~~~~v~  556 (894)
                        ..+                 .+++|||||++|+++..+.. +.+|.+..                     ......|+
T Consensus       152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~  231 (740)
T 4a5s_A          152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF  231 (740)
T ss_dssp             BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred             CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence              112                 35899999999999876544 55554321                     12234689


Q ss_pred             EEeccc---cc--eEEEcc------CCCCCeEEEEEecCCCEEEEEeC----CCcEEEEECCCCc
Q psy10063        557 FYHLIF---EE--EFARIK------GHFGPINSLAFHPDGKSYASGGE----DGFLISNTLSNGL  606 (894)
Q Consensus       557 vwd~~~---~~--~~~~l~------~h~~~V~~l~~spdg~~l~sgs~----Dg~I~vwdl~~~~  606 (894)
                      +||+..   ++  ....+.      +|...+..++|+|||++++....    +..|++||+.+++
T Consensus       232 v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~  296 (740)
T 4a5s_A          232 VVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS  296 (740)
T ss_dssp             EEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred             EEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence            999998   73  223333      48888999999999997665532    2369999998775

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.76  E-value=2.8e-17  Score=198.02  Aligned_cols=192  Identities=10%  Similarity=0.009  Sum_probs=141.2

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEe--cCCCcEEEEecCCCeEEEEecCCCCCCee---------EEEEc--CCCCE-EEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITG--HAKGDICTWDLRMGRELESISGHAKEPIN---------DMQFS--KDATM-FIT  469 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sg--s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~---------~v~~s--pdg~~-la~  469 (894)
                      .+.+|...|..++|++++-+++..  +.++...||.+..+...+.+..+.. .|.         .+.|+  |||++ |+.
T Consensus        18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~SPDg~~~la~   96 (662)
T 3azo_A           18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPW-NVRNRVFEYSGFPWAGVPRPAGGPLLVF   96 (662)
T ss_dssp             HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTC-CBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred             HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCc-cccccccccCCccceeeeecCCCeEEEE
Confidence            356799999999999887666766  6688999999765666777777765 565         56666  99998 776


Q ss_pred             EeC----------C----CCc------------cceEEEEEecCCCEEEEEECC----------CCEEEEEcCC------
Q psy10063        470 ASH----------S----QAV------------EPINDMQFSKDATMFITASKD----------HTAKLFTTHD------  507 (894)
Q Consensus       470 ~~~----------d----~~i------------~~V~~l~~spdg~~L~sgs~D----------g~V~iwdl~~------  507 (894)
                      .+.          +    +..            ..+.+++|+|||++|++++.|          ..|++||+..      
T Consensus        97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  176 (662)
T 3azo_A           97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR  176 (662)
T ss_dssp             EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred             EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence            653          2    221            246789999999999999877          5899999988      


Q ss_pred             CcEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc-cc---ceEEEccCCCCCeEEEEEe
Q psy10063        508 RQLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI-FE---EEFARIKGHFGPINSLAFH  582 (894)
Q Consensus       508 ~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~-~~---~~~~~l~~h~~~V~~l~~s  582 (894)
                      ++..... .+...+..++|||||++|++++.++....|      ...+|++||+. .+   +......+|...+..++|+
T Consensus       177 ~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~------~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s  250 (662)
T 3azo_A          177 SAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW------EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA  250 (662)
T ss_dssp             GGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTT------TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred             CceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCC------CCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence            6665544 455678889999999999988765421111      11248999998 56   4444445567889999999


Q ss_pred             cCCCEEEEEeCCCcEEEEEC
Q psy10063        583 PDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       583 pdg~~l~sgs~Dg~I~vwdl  602 (894)
                      |||+++++++.++.++||.+
T Consensus       251 pdg~l~~~~~~~~~~~l~~~  270 (662)
T 3azo_A          251 PDGSLIVATDRTGWWNLHRV  270 (662)
T ss_dssp             TTSCEEEEECTTSSCEEEEE
T ss_pred             CCCeEEEEECCCCCeEEEEE
Confidence            99998888888885444433

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.75  E-value=6.2e-16  Score=169.67  Aligned_cols=125  Identities=12%  Similarity=0.051  Sum_probs=88.5

Q ss_pred             CEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        411 KITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       411 ~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      .+.+++|+|||++|+ ++..++.|++||+.+++.+..+..+.. +-..                  ...+.+++|+|||+
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~-~~~~------------------~~~~~~~~~spdg~  104 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV-PGEV------------------GRSMYSFAISPDGK  104 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS-TTEE------------------EECSSCEEECTTSS
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc-cccc------------------cccccceEECCCCC
Confidence            688999999998654 556789999999999998877764321 0000                  00245566666666


Q ss_pred             EEEEEECC------------CCEEEEEcCCCc---EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        490 MFITASKD------------HTAKLFTTHDRQ---LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       490 ~L~sgs~D------------g~V~iwdl~~~~---~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      +|++++.+            +.|++||+.+++   .+..+.+...+.+++|+|+|+ |++++  +.              
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~--~~--------------  167 (349)
T 1jmx_B          105 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG--PD--------------  167 (349)
T ss_dssp             EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES--SS--------------
T ss_pred             EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEcc--Cc--------------
Confidence            66665543            899999998844   445566666799999999999 66542  21              


Q ss_pred             EEEEeccccceEEEccC
Q psy10063        555 ARFYHLIFEEEFARIKG  571 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~  571 (894)
                      |++||+..++.+..+..
T Consensus       168 i~~~d~~~~~~~~~~~~  184 (349)
T 1jmx_B          168 IYKMDVKTGKYTVALPL  184 (349)
T ss_dssp             EEEECTTTCCEEEEECS
T ss_pred             EEEEeCCCCceeccccc
Confidence            78899988887776653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.74  E-value=8.6e-16  Score=170.86  Aligned_cols=169  Identities=10%  Similarity=0.055  Sum_probs=112.5

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecC-CCeEEEEecCCCCCCeeEEEEcCCCCEEE-EEeCCCCccceEEEEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLR-MGRELESISGHAKEPINDMQFSKDATMFI-TASHSQAVEPINDMQF  484 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~-tg~~~~~l~~h~~~~V~~v~~spdg~~la-~~~~d~~i~~V~~l~~  484 (894)
                      ++...+..++|+|||++|++++.+ .|.+||+. +|++++.......+.+.+++|+|||++|+ .....           
T Consensus        37 ~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~-----------  104 (365)
T 1jof_A           37 PQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQ-----------  104 (365)
T ss_dssp             CTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSS-----------
T ss_pred             CCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecC-----------
Confidence            345578899999999999999888 99999997 78765443311111233445555554311 11100           


Q ss_pred             ecCCCEEEEEE----CCCCEEEEEcC-CCcEEEEEe-----CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        485 SKDATMFITAS----KDHTAKLFTTH-DRQLLKTYT-----TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       485 spdg~~L~sgs----~Dg~V~iwdl~-~~~~~~~~~-----~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                         +++...+.    .++.+++|++. ++++...+.     +...+.+++|+|||++|+++.....             .
T Consensus       105 ---~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~-------------~  168 (365)
T 1jof_A          105 ---PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN-------------K  168 (365)
T ss_dssp             ---TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-------------E
T ss_pred             ---CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC-------------E
Confidence               11111121    68899999997 576654443     3467999999999999988764322             2


Q ss_pred             EEEEecc-ccceE--EEcc--CCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECC
Q psy10063        555 ARFYHLI-FEEEF--ARIK--GHFGPINSLAFHPDGKSYASGGE-DGFLISNTLS  603 (894)
Q Consensus       555 v~vwd~~-~~~~~--~~l~--~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~  603 (894)
                      |++|++. .++..  ..+.  .|...+..++|+|||++|++++. ++.|.+|+++
T Consensus       169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~  223 (365)
T 1jof_A          169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence            7888887 56543  2333  24567999999999999888775 6889999875

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.73  E-value=4.3e-17  Score=182.48  Aligned_cols=207  Identities=10%  Similarity=-0.030  Sum_probs=138.3

Q ss_pred             eeeeccCccEEEecCCC----eEE-E--------EEecCCCC-EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec
Q psy10063        383 LNSMSPAARKLATNAEP----VVK-M--------QVTDQSAK-ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS  448 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~~----~~~-~--------~l~~H~~~-V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~  448 (894)
                      ..+|||||++|+.....    .+. +        .+..+... +.++.|+|||++|++++.++.|++||+..++....+.
T Consensus        40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~  119 (396)
T 3c5m_A           40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT  119 (396)
T ss_dssp             SCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             cCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe
Confidence            34688999887755321    121 1        22233333 3347899999999999988899999999888766665


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCcc-ceEEEEEecCCCEEEEE-----ECCCCEEEEEcCCCcEEEEEeCCCCeeE
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAVE-PINDMQFSKDATMFITA-----SKDHTAKLFTTHDRQLLKTYTTERPVNS  522 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i~-~V~~l~~spdg~~L~sg-----s~Dg~V~iwdl~~~~~~~~~~~~~~v~~  522 (894)
                      .+..       |+++|++|+....+.... ....++|+|++++|+.+     ..+..|++||+..++......+...+..
T Consensus       120 ~~~~-------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~  192 (396)
T 3c5m_A          120 VDEE-------WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGH  192 (396)
T ss_dssp             CCTT-------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEE
T ss_pred             cccc-------cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccccc
Confidence            5543       667777776554432110 11124678999887765     3567899999999988877777788999


Q ss_pred             EEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC--CCCeEEEEEecCCCEEEEEeCC-----
Q psy10063        523 AALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH--FGPINSLAFHPDGKSYASGGED-----  594 (894)
Q Consensus       523 l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h--~~~V~~l~~spdg~~l~sgs~D-----  594 (894)
                      ++|+| +|++|++.+.++.        ......|.+||+..++.. .+..+  ...+..++|+|||++|+.++.+     
T Consensus       193 ~~~sp~dg~~l~~~~~~~~--------~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~  263 (396)
T 3c5m_A          193 PIYRPFDDSTVGFCHEGPH--------DLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD  263 (396)
T ss_dssp             EEEETTEEEEEEEEECSCS--------SSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred             ceECCCCCCEEEEEecCCC--------CCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence            99999 8888887764321        000013778887755543 33333  2357889999999988776543     


Q ss_pred             CcEEEEECCCC
Q psy10063        595 GFLISNTLSNG  605 (894)
Q Consensus       595 g~I~vwdl~~~  605 (894)
                      +.|++||+..+
T Consensus       264 ~~l~~~d~~~g  274 (396)
T 3c5m_A          264 RVIYKANPETL  274 (396)
T ss_dssp             EEEEEECTTTC
T ss_pred             ceEEEEECCCC
Confidence            33888887554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.72  E-value=2.9e-16  Score=175.58  Aligned_cols=124  Identities=10%  Similarity=-0.005  Sum_probs=88.8

Q ss_pred             EEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC-CC--CEEEEEcCCCc
Q psy10063        433 ICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK-DH--TAKLFTTHDRQ  509 (894)
Q Consensus       433 I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~-Dg--~V~iwdl~~~~  509 (894)
                      ...+|..+|..+..+..|.. .+..+                   .+...+|+|||++|+.++. ++  .|.+||+..++
T Consensus        12 ~~~~~~~~g~~~~~lt~~~~-~~~~~-------------------~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~   71 (388)
T 3pe7_A           12 DTYQDASTGAQVTRLTPPDV-TCHRN-------------------YFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV   71 (388)
T ss_dssp             EEEECTTTCCEEEECSCTTS-CEECC-------------------CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE
T ss_pred             eEEecCCCCcceEEecCCcc-cccch-------------------hhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc
Confidence            34457788888888887764 11110                   1223678888888888876 56  38888999998


Q ss_pred             EEEEEeCCC-CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEE--ecCCC
Q psy10063        510 LLKTYTTER-PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF--HPDGK  586 (894)
Q Consensus       510 ~~~~~~~~~-~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~--spdg~  586 (894)
                      ..+...++. .+.+++|+|||++|+++..++.              |++||+..++....+..+...+....|  +++++
T Consensus        72 ~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~--------------l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~  137 (388)
T 3pe7_A           72 ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRN--------------LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT  137 (388)
T ss_dssp             EEECCCSSCBCSSSCEECTTSSEEEEEETTTE--------------EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred             eEEeeeCCCCCccceEEcCCCCEEEEEeCCCe--------------EEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence            887766543 4457889999999999997764              889999988877766666665544443  78888


Q ss_pred             EEEE
Q psy10063        587 SYAS  590 (894)
Q Consensus       587 ~l~s  590 (894)
                      +|+.
T Consensus       138 ~l~~  141 (388)
T 3pe7_A          138 KLVG  141 (388)
T ss_dssp             EEEE
T ss_pred             eecc
Confidence            7764

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.71  E-value=2.3e-14  Score=167.65  Aligned_cols=325  Identities=9%  Similarity=-0.011  Sum_probs=213.0

Q ss_pred             cCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCC
Q psy10063        419 NLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDH  498 (894)
Q Consensus       419 pdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg  498 (894)
                      +.+.++++...++.|.|||..+++.+..+....                          .+.++.|+|||++|++++.|+
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--------------------------~p~~v~~SpDGr~lyv~~~dg  218 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--------------------------AVHISRLSASGRYLFVIGRDG  218 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS--------------------------CEEEEEECTTSCEEEEEETTS
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--------------------------CccceEECCCCCEEEEEcCCC
Confidence            445577778889999999999999998887554                          366788889999999999999


Q ss_pred             CEEEEEcC--CCcEEEEEeCCCCeeEEEEc----CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC-
Q psy10063        499 TAKLFTTH--DRQLLKTYTTERPVNSAALS----PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG-  571 (894)
Q Consensus       499 ~V~iwdl~--~~~~~~~~~~~~~v~~l~~s----pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~-  571 (894)
                      .|.+||+.  +++.+..+........++|+    |||++|+++......             |.++|..+.+.+..+.. 
T Consensus       219 ~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~-------------v~ViD~~t~~~~~~i~~~  285 (567)
T 1qks_A          219 KVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ-------------YVIMDGETLEPKKIQSTR  285 (567)
T ss_dssp             EEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTE-------------EEEEETTTCCEEEEEECC
T ss_pred             eEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCe-------------EEEEECCCCcEEEEEecc
Confidence            99999996  88888888877778999999    699999998876542             78889888888876542 


Q ss_pred             ---------C-CCCeEEEEEecCCCE-EEEEeCCCcEEEEECCCCc-----cccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        572 ---------H-FGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGL-----DISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       572 ---------h-~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~~~~-----~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                               | ...+..+.+++++.. ++....+|.|.++|+...+     .+..+.....+.|+|+|+++..       
T Consensus       286 ~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~v-------  358 (567)
T 1qks_A          286 GMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFIT-------  358 (567)
T ss_dssp             EECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEE-------
T ss_pred             ccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEE-------
Confidence                     1 126788888888664 5555667999999987653     2223455556667776665421       


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                      +.. ....|.+++...                                                
T Consensus       359 ----------------a~~-~sn~V~ViD~~t------------------------------------------------  373 (567)
T 1qks_A          359 ----------------AAN-ARNKLVVIDTKE------------------------------------------------  373 (567)
T ss_dssp             ----------------EEG-GGTEEEEEETTT------------------------------------------------
T ss_pred             ----------------EeC-CCCeEEEEECCC------------------------------------------------
Confidence                            110 011111111000                                                


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEE-EEec-CCCcEEEEEccC--
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL-ALAL-ADKVSERYRDRK--  791 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~L-atgs-~Dg~I~iwd~~~--  791 (894)
                      ++++...             .           ..+     ...|.+.... .++|++..+ +++. .++.|.++|...  
T Consensus       374 ~kl~~~i-------------~-----------vgg-----~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~  423 (567)
T 1qks_A          374 GKLVAIE-------------D-----------TGG-----QTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEG  423 (567)
T ss_dssp             TEEEEEE-------------E-----------CSS-----SSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred             CcEEEEE-------------e-----------ccC-----cCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence            0000000             0           000     0012111111 256774444 4443 568899999877  


Q ss_pred             -----CceeeccccCC---CceEeecCCCeEEEEecCCC---CceeEEEeecCCc-----c-eeeecc--------CCCC
Q psy10063        792 -----NKATAGFLLSC---PDFLFDFDTTREVTTTSTKV---GKFDARFYHLIFE-----E-EFARIK--------GHFG  846 (894)
Q Consensus       792 -----~~~~~~~~~~~---~~~~fS~dg~~l~~as~d~~---g~~~I~vwd~~tg-----~-~l~~l~--------gH~~  846 (894)
                           .+.+..+....   -.+.++|+++++++.....-   ..-.|.|||+.+.     . .+..+.        ....
T Consensus       424 ~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  503 (567)
T 1qks_A          424 HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQP  503 (567)
T ss_dssp             CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCC
T ss_pred             CccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCc
Confidence                 55555544322   23668999999998763210   0115999999876     2 112221        1235


Q ss_pred             CeeEEEEeeCCcEEEEec-----CCCcEEEEecCccccccccc
Q psy10063        847 PINSLAFHPDGKSYASGG-----EDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       847 ~V~~l~fSpdg~~LaS~s-----~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .+..+.|++||++|..+.     .++.|.|+|.++.+++..+.
T Consensus       504 ~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~  546 (567)
T 1qks_A          504 RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK  546 (567)
T ss_dssp             EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred             ceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence            688999999998776652     37999999999998877765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.70  E-value=1.5e-15  Score=167.10  Aligned_cols=149  Identities=10%  Similarity=-0.037  Sum_probs=98.1

Q ss_pred             CCEEEEEEccCCCEEEEec---------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        410 AKITSLLWGNLDQYIITGH---------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs---------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ..|..++|  ||++|+...         .++.|++||+..++... +    .                         .+.
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~-------------------------~~~   62 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----E-------------------------NAT   62 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----E-------------------------SCE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----c-------------------------cCC
Confidence            45677777  888777642         25679999998876433 3    2                         355


Q ss_pred             EEEEecCCCEEEEEECC---C--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC----eE-E----Eec
Q psy10063        481 DMQFSKDATMFITASKD---H--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA----RE-V----TTT  546 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~D---g--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~----~~-v----~~~  546 (894)
                      +++|+|||++|+.++.+   +  .|.+||+..++......+.. +.+++|+|||++|++++.+..    .. +    +..
T Consensus        63 ~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~  141 (347)
T 2gop_A           63 MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF  141 (347)
T ss_dssp             EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred             CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence            56666666666655533   2  48888999888777766655 999999999999998874310    00 0    000


Q ss_pred             cC----ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        547 ST----KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       547 ~~----~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      +.    ......|.+||+..++.+..+.. . .+..++|+||| +++++..+
T Consensus       142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~  190 (347)
T 2gop_A          142 DDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR  190 (347)
T ss_dssp             --------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred             cCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence            00    01123588999988877455544 3 78899999999 77776554

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.70  E-value=3.3e-15  Score=165.83  Aligned_cols=283  Identities=12%  Similarity=-0.008  Sum_probs=181.4

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEE
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITA  470 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~  470 (894)
                      +...+..+...  .++|+|||++|+++.          .++.|.+||+.+++.+..+..... ...      .+      
T Consensus        43 ~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~-~~~------~g------  107 (361)
T 2oiz_A           43 FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK-RVQ------GL------  107 (361)
T ss_dssp             EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT-BCC------BC------
T ss_pred             EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc-ccc------cC------
Confidence            33445555444  899999999999886          356799999999998888764321 000      00      


Q ss_pred             eCCCCccceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEE-EeCCCCeeEEEEcCCC-CEEEEEECCCCeEEEec
Q psy10063        471 SHSQAVEPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKT-YTTERPVNSAALSPIL-PHVVLGGGQEAREVTTT  546 (894)
Q Consensus       471 ~~d~~i~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~-~~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~  546 (894)
                            .....|+|+|||++|+++..  ++.|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.++.+.    
T Consensus       108 ------~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~----  176 (361)
T 2oiz_A          108 ------NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLL----  176 (361)
T ss_dssp             ------CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEE----
T ss_pred             ------CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEE----
Confidence                  14567888889998888764  57899999999998887 55433 2335677766 5677777777643    


Q ss_pred             cCccceeeEEEEeccc-cceE------EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEE
Q psy10063        547 STKVGKFDARFYHLIF-EEEF------ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQ  619 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~-~~~~------~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~  619 (894)
                                +|++.. ++..      ..+..+...+ .+.+++++..++..+.++.|.+||+......           
T Consensus       177 ----------~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~-----------  234 (361)
T 2oiz_A          177 ----------TINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVK-----------  234 (361)
T ss_dssp             ----------EEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCE-----------
T ss_pred             ----------EEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCce-----------
Confidence                      333322 2222      1112222222 3344677777777778888888887543210           


Q ss_pred             CcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEecc
Q psy10063        620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTK  699 (894)
Q Consensus       620 spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~  699 (894)
                            +      +..+..                           .......                           
T Consensus       235 ------~------~~~~~~---------------------------~~~~~~~---------------------------  248 (361)
T 2oiz_A          235 ------V------DGPWSL---------------------------LNDEDKA---------------------------  248 (361)
T ss_dssp             ------E------EEEEES---------------------------CCHHHHH---------------------------
T ss_pred             ------e------cccccc---------------------------cCccccc---------------------------
Confidence                  0      000000                           0000000                           


Q ss_pred             CcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec
Q psy10063        700 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL  779 (894)
Q Consensus       700 ~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs  779 (894)
                                                                  ..+.+.+            ...++|+|++++|+++.
T Consensus       249 --------------------------------------------~~~~p~g------------~~~~a~~~dg~~lyv~~  272 (361)
T 2oiz_A          249 --------------------------------------------KNWVPGG------------YNLVGLHRASGRMYVFM  272 (361)
T ss_dssp             --------------------------------------------TTCEECC------------SSCEEEETTTTEEEEEE
T ss_pred             --------------------------------------------cccccCC------------eeEEEEecCCCeEEEEE
Confidence                                                        0000000            01246778877776653


Q ss_pred             C-----------CCcEEEEEccCCceeeccccC-CCceEeecCCCeEEEEecCCCCceeEEEeecCCc--ceeeeccCCC
Q psy10063        780 A-----------DKVSERYRDRKNKATAGFLLS-CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE--EEFARIKGHF  845 (894)
Q Consensus       780 ~-----------Dg~I~iwd~~~~~~~~~~~~~-~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg--~~l~~l~gH~  845 (894)
                      .           ...|.+||+.+++.+..+..+ ...++|++||++|+++.. +    .|.|||.+++  +++..+..+.
T Consensus       273 ~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~p~~ia~spdg~~l~v~n~-~----~v~v~D~~t~~l~~~~~i~~~G  347 (361)
T 2oiz_A          273 HPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRDALSMTIDQQRNLMLTLDG-G----NVNVYDISQPEPKLLRTIEGAA  347 (361)
T ss_dssp             ESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTTCCEEEEETTTTEEEEECS-S----CEEEEECSSSSCEEEEEETTSC
T ss_pred             ccCCCcccccCCCceEEEEECCCCcEEEEEecCCeeEEEECCCCCEEEEeCC-C----eEEEEECCCCcceeeEEeccCC
Confidence            3           347999999999887655432 667889999999988775 3    6999999999  9999987777


Q ss_pred             CCeeEEEEeeCCc
Q psy10063        846 GPINSLAFHPDGK  858 (894)
Q Consensus       846 ~~V~~l~fSpdg~  858 (894)
                      .....|+|+|||+
T Consensus       348 ~~P~~~~~~p~G~  360 (361)
T 2oiz_A          348 EASLQVQFHPVGG  360 (361)
T ss_dssp             SSEEEEEECCCSC
T ss_pred             CCcEEEEecCCCC
Confidence            8888999999986

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.68  E-value=4.2e-15  Score=162.59  Aligned_cols=142  Identities=9%  Similarity=0.088  Sum_probs=107.6

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      ...|.+++|++++..|+..+.++.+++|   .++.+..+..+..                         .+.+++|+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------------------~~~~~~~~~~g   56 (333)
T 2dg1_A            5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGL-------------------------QLEGLNFDRQG   56 (333)
T ss_dssp             -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCC-------------------------CEEEEEECTTS
T ss_pred             ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCc-------------------------cccCcEECCCC
Confidence            3457888999998888877888899999   3666677766655                         56788888888


Q ss_pred             CEEEEEECCCCEEEEEcCCCcEEEEE-eCCCCeeEEEEcCCCCEEEEEECC----CCeEEEeccCccceeeEEEEecccc
Q psy10063        489 TMFITASKDHTAKLFTTHDRQLLKTY-TTERPVNSAALSPILPHVVLGGGQ----EAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~----~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      ++++++..++.|++||...++....+ .....+.+++|+++|+++++...+    +.              |.+||...+
T Consensus        57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~--------------i~~~d~~~~  122 (333)
T 2dg1_A           57 QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG--------------IFAATENGD  122 (333)
T ss_dssp             CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE--------------EEEECTTSC
T ss_pred             CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce--------------EEEEeCCCC
Confidence            87778888899999999988877655 346789999999999877766554    22              778887766


Q ss_pred             ceEEEcc--CCCCCeEEEEEecCCCEEEEEe
Q psy10063        564 EEFARIK--GHFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       564 ~~~~~l~--~h~~~V~~l~~spdg~~l~sgs  592 (894)
                      +....+.  .+...+.+++++++|+++++..
T Consensus       123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~  153 (333)
T 2dg1_A          123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF  153 (333)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred             EEEEEEccCccCCcccceEECCCCCEEEEec
Confidence            6543332  2445789999999998777654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.68  E-value=2e-14  Score=153.64  Aligned_cols=161  Identities=9%  Similarity=0.109  Sum_probs=116.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe-
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS-  485 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s-  485 (894)
                      +|-..+.+|+++++|+++++...++.|++||.. ++.+..+.....                   ..+....+.+|++. 
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~-------------------~~~~~~~p~~i~~~~   86 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGK-------------------RDSQLLYPNRVAVVR   86 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSS-------------------STTCBSSEEEEEEET
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCC-------------------CcccccCceEEEEEc
Confidence            566789999999999988888889999999987 666666643210                   01112257788884 


Q ss_pred             cCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        486 KDATMFITASK-DHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       486 pdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      +++.++++... ++.|++|| .+++.+..+..  ...+.+++++++|+.+++...++.              |++||.. 
T Consensus        87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--------------i~~~~~~-  150 (286)
T 1q7f_A           87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMR--------------VIIFDQN-  150 (286)
T ss_dssp             TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTE--------------EEEECTT-
T ss_pred             CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCE--------------EEEEcCC-
Confidence            56666655533 78999999 67887777754  357899999999986665555554              6777754 


Q ss_pred             cceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        563 EEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       563 ~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      ++.+..+.  ++...+.+|+++++|+++++...++.|++|+..
T Consensus       151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~  193 (286)
T 1q7f_A          151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE  193 (286)
T ss_dssp             SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred             CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence            55555443  455678999999999988877778999999863

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.65  E-value=2e-14  Score=157.41  Aligned_cols=229  Identities=10%  Similarity=0.088  Sum_probs=155.0

Q ss_pred             CCEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-eEEEc-----
Q psy10063        498 HTAKLFTTHDRQLLKTYTTE--RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-EFARI-----  569 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-~~~~l-----  569 (894)
                      +.|.+||..+++++..+...  ..+..|+|+++|+++++...++.              |++|+..... .+..+     
T Consensus        69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~--------------v~~~~~~g~~~~~~~~~~~~~  134 (329)
T 3fvz_A           69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQ--------------VFKLDPHSKEGPLLILGRSMQ  134 (329)
T ss_dssp             CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTE--------------EEEECTTCSSCCSEEESBTTB
T ss_pred             CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCE--------------EEEEeCCCCeEEEEEecccCC
Confidence            68999999999988777632  57899999999996666555554              6777765332 34444     


Q ss_pred             ----cCCCCCeEEEEEec-CCCEEEEEe-CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        570 ----KGHFGPINSLAFHP-DGKSYASGG-EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       570 ----~~h~~~V~~l~~sp-dg~~l~sgs-~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                          .++.....+|+|++ +|.++++.+ .++.|++|+.+..                   ++       ..+...    
T Consensus       135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~-------------------~~-------~~~~~~----  184 (329)
T 3fvz_A          135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK-------------------FV-------TQWGEE----  184 (329)
T ss_dssp             CCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-------------------EE-------EEECEE----
T ss_pred             CCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-------------------EE-------EEeccC----
Confidence                34555789999999 788888776 6889999984321                   10       000000    


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                              +.                                                              +       
T Consensus       185 --------g~--------------------------------------------------------------~-------  187 (329)
T 3fvz_A          185 --------SS--------------------------------------------------------------G-------  187 (329)
T ss_dssp             --------CC--------------------------------------------------------------S-------
T ss_pred             --------CC--------------------------------------------------------------C-------
Confidence                    00                                                              0       


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCceeecccc--
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNKATAGFLL--  800 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~~~~~~~~--  800 (894)
                                               .    ....++......|+++|+ +.++++...++.|++|+..+++.+..+..  
T Consensus       188 -------------------------~----~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~  238 (329)
T 3fvz_A          188 -------------------------S----SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS  238 (329)
T ss_dssp             -------------------------S----SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT
T ss_pred             -------------------------C----CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc
Confidence                                     0    000011123568899998 77778888899999999987777655432  


Q ss_pred             ---CCCceEeecCCCeEEEEecC---CCCceeEEEeecCCcceeeec---cCCCCCeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        801 ---SCPDFLFDFDTTREVTTTST---KVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       801 ---~~~~~~fS~dg~~l~~as~d---~~g~~~I~vwd~~tg~~l~~l---~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                         ....++|+| +..++..+..   ..+...|++|++..|+++..+   .+|...+.+|+|++||.++++...++.|++
T Consensus       239 ~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~  317 (329)
T 3fvz_A          239 FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK  317 (329)
T ss_dssp             TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred             cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence               233566777 3222222111   011225999999999999887   478888999999999999999999999999


Q ss_pred             EecCcc
Q psy10063        872 HTFDQA  877 (894)
Q Consensus       872 Wdl~~~  877 (894)
                      |+++..
T Consensus       318 ~~~~~~  323 (329)
T 3fvz_A          318 FTLTEK  323 (329)
T ss_dssp             EEEEEC
T ss_pred             EeCCcc
Confidence            999754

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.64  E-value=2.7e-14  Score=173.45  Aligned_cols=127  Identities=12%  Similarity=0.021  Sum_probs=86.2

Q ss_pred             ceEEEEEecCCCEEEEEECCC-----CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE--EeccCcc
Q psy10063        478 PINDMQFSKDATMFITASKDH-----TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV--TTTSTKV  550 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg-----~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v--~~~~~~~  550 (894)
                      .+..++|||||++||.++.++     .|+|||+.+++.+........+.+++|+|||+.|+++..++.-.-  -......
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~  205 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN  205 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence            466778888888887765433     899999999998775443344778999999999999987653000  0000001


Q ss_pred             ceeeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeC-----CCcEEEEECCC
Q psy10063        551 GKFDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGE-----DGFLISNTLSN  604 (894)
Q Consensus       551 ~~~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~-----Dg~I~vwdl~~  604 (894)
                      ....|++|++.+++    .+.....|...+.++.|+|||++|+.++.     +..|++||+..
T Consensus       206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~  268 (710)
T 2xdw_A          206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ  268 (710)
T ss_dssp             CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred             CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence            12348889988765    22233335667889999999999887764     45677777643

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.60  E-value=1.3e-13  Score=167.43  Aligned_cols=177  Identities=12%  Similarity=0.088  Sum_probs=108.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCC-----cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKG-----DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg-----~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      |...+.+++|||||++||.+..++     .|+|||+.+|+.+.....+.  .+..++|+|||+.|++++.++.-...   
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~--~~~~~~wspDg~~l~~~~~~~~~~~~---  197 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV--KFSCMAWTHDGKGMFYNAYPQQDGKS---  197 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE--CSCCEEECTTSSEEEEEECCCCSSCC---
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc--ccceEEEEeCCCEEEEEEECCccccc---
Confidence            444688999999999998775433     89999999998776433222  23445555555555554443221000   


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQL--LKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                          ++.. -.......|++|++.+++.  ...+..   ...+..++|+|||++|++.+..+.-         ...+|++
T Consensus       198 ----~~~~-~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---------~~~~l~~  263 (710)
T 2xdw_A          198 ----DGTE-TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD---------PVNRLWY  263 (710)
T ss_dssp             ----SSSC-CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS---------SCCEEEE
T ss_pred             ----cccc-cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC---------CccEEEE
Confidence                0000 0001123499999988763  233332   3457899999999999988753310         0123888


Q ss_pred             Eeccc------cc-eEEEccCCCCCeEEEEEecCCCEEEEEeCCC----cEEEEECCC
Q psy10063        558 YHLIF------EE-EFARIKGHFGPINSLAFHPDGKSYASGGEDG----FLISNTLSN  604 (894)
Q Consensus       558 wd~~~------~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg----~I~vwdl~~  604 (894)
                      ||+..      +. .+..+..+...+.. .|+++|+.|+..+.++    .|.+|++..
T Consensus       264 ~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~  320 (710)
T 2xdw_A          264 CDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD  320 (710)
T ss_dssp             EEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred             EECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            99876      43 45666667666655 4888988877665432    477777654

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.60  E-value=1.9e-12  Score=143.88  Aligned_cols=145  Identities=12%  Similarity=0.028  Sum_probs=100.8

Q ss_pred             EEccCCCEEEEecC--CC---cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063        416 LWGNLDQYIITGHA--KG---DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM  490 (894)
Q Consensus       416 ~~spdg~~L~sgs~--Dg---~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~  490 (894)
                      ...|+++++++...  ..   .|.+||..+++.+..+.....                         +  .++|+|||++
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-------------------------p--~i~~spDg~~   79 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-------------------------P--NPVAAHSGSE   79 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-------------------------C--CeEECCCCCE
Confidence            34467777777653  22   789999999999888775443                         1  4455555555


Q ss_pred             EEEEE----------CCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccc
Q psy10063        491 FITAS----------KDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVG  551 (894)
Q Consensus       491 L~sgs----------~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~  551 (894)
                      |+.+.          .++.|.+||..+++.+..+...        .....++|+|||++|+++... ..           
T Consensus        80 lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~-----------  148 (373)
T 2mad_H           80 FALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP-----------  148 (373)
T ss_pred             EEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC-----------
Confidence            55543          3678999999999888877643        345689999999999998753 22           


Q ss_pred             eeeEEEEeccccceEEE-ccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCc
Q psy10063        552 KFDARFYHLIFEEEFAR-IKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~-l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                        .|.++| .+++.+.. +... +   |+.+.+++ +.+++.+.||.+.+|++ .++
T Consensus       149 --~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~  197 (373)
T 2mad_H          149 --AVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG  197 (373)
T ss_pred             --eEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence              178889 88888877 5432 1   24455655 45666778999999988 543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.59  E-value=3.9e-13  Score=144.40  Aligned_cols=170  Identities=11%  Similarity=-0.022  Sum_probs=116.6

Q ss_pred             EecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        405 VTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      +..+.....+++|+|+|+ +++++..++.|++||...+  +..+..+..                         .+.+|+
T Consensus        23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~-------------------------~~~~l~   75 (296)
T 3e5z_A           23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSH-------------------------HQNGHC   75 (296)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCS-------------------------SEEEEE
T ss_pred             EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCC-------------------------Ccceee
Confidence            345677889999999998 7888888999999999877  555555544                         577888


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEE---eccCccceeeE
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVT---TTSTKVGKFDA  555 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~---~~~~~~~~~~v  555 (894)
                      |+++|+++++...++.|.+||..+++.......     ...+..++++++|+++++....+....+   ......+...|
T Consensus        76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l  155 (296)
T 3e5z_A           76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV  155 (296)
T ss_dssp             ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred             ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence            888888777776678999999988886654432     2356789999999877763211100000   00000000014


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      ..++.. ++ +..+..+......++|+|||++|++...++.|++|+++
T Consensus       156 ~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~  201 (296)
T 3e5z_A          156 FRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN  201 (296)
T ss_dssp             EEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred             EEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence            445544 33 34445666778999999999988777778899999875

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.59  E-value=6.4e-12  Score=146.89  Aligned_cols=160  Identities=9%  Similarity=0.039  Sum_probs=118.8

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecC--CCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLR--MGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~--tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      ....+.+++|+|||++|++++.|+.|.+||+.  +++.+..+....                          ....|+|+
T Consensus       195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--------------------------~P~~ia~s  248 (567)
T 1qks_A          195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--------------------------EARSIETS  248 (567)
T ss_dssp             CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--------------------------EEEEEEEC
T ss_pred             CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--------------------------CCceeEEc
Confidence            34467899999999999999999999999995  788888777543                          35677788


Q ss_pred             ----cCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeCC------------CCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        486 ----KDATMFITASK-DHTAKLFTTHDRQLLKTYTTE------------RPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       486 ----pdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~~------------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                          |||++|+++.+ ++.|.|||..+.++++.+...            ..+..+.+++++..+++...+...       
T Consensus       249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~-------  321 (567)
T 1qks_A          249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK-------  321 (567)
T ss_dssp             CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE-------
T ss_pred             cccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe-------
Confidence                58887776654 589999999999999887632            257888999988877776655432       


Q ss_pred             ccceeeEEEEeccccceEEEc-cCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        549 KVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       549 ~~~~~~v~vwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                            |.++|+...+.+... ........++.|+++|++|+++. .++.|.+||+.+++
T Consensus       322 ------v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k  375 (567)
T 1qks_A          322 ------ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK  375 (567)
T ss_dssp             ------EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred             ------EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence                  666666544322211 12334577899999999887665 57889999998765

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.58  E-value=3.6e-13  Score=147.29  Aligned_cols=265  Identities=9%  Similarity=-0.023  Sum_probs=179.6

Q ss_pred             CCCcEEEEecCCCeEEEEecCC--CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcC
Q psy10063        429 AKGDICTWDLRMGRELESISGH--AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTH  506 (894)
Q Consensus       429 ~Dg~I~iWd~~tg~~~~~l~~h--~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~  506 (894)
                      .++.|.+||.++++.++.+...  .. .+        |            .....|++. +++++++...++.|.+||.+
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~-~l--------g------------~~~~~i~~~-~~~lyv~~~~~~~v~viD~~   72 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGF-KL--------G------------DVAQSMVIR-DGIGWIVVNNSHVIFAIDIN   72 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSS-CC--------B------------SCEEEEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCc-cc--------C------------ccceEEEEE-CCEEEEEEcCCCEEEEEECc
Confidence            4789999999999876554210  00 00        0            035566664 34555556667899999999


Q ss_pred             CCcEEEEEeCCCCeeEEEEcCCCCEEEEEE-CCCCeEEEeccCccceeeEEEEeccccceEEEccCCC-----CCeEEEE
Q psy10063        507 DRQLLKTYTTERPVNSAALSPILPHVVLGG-GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF-----GPINSLA  580 (894)
Q Consensus       507 ~~~~~~~~~~~~~v~~l~~spdg~~l~~~~-~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~-----~~V~~l~  580 (894)
                      +++++..+........+++++++ +|+++. .++.              |.+||..+++.+..+....     .....|+
T Consensus        73 t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~--------------v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~  137 (328)
T 3dsm_A           73 TFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYR--------------IFIINPKTYEITGYIECPDMDMESGSTEQMV  137 (328)
T ss_dssp             TCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSE--------------EEEEETTTTEEEEEEECTTCCTTTCBCCCEE
T ss_pred             ccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCe--------------EEEEECCCCeEEEEEEcCCccccCCCcceEE
Confidence            99999999877889999999998 666666 5554              8889999888776665332     1456777


Q ss_pred             EecCCCEEEEEe--CCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCC
Q psy10063        581 FHPDGKSYASGG--EDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDS  658 (894)
Q Consensus       581 ~spdg~~l~sgs--~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~  658 (894)
                      +  ++..|+.+.  .++.|.+||+++++.+.                         .+..                    
T Consensus       138 ~--~~~~lyv~~~~~~~~v~viD~~t~~~~~-------------------------~i~~--------------------  170 (328)
T 3dsm_A          138 Q--YGKYVYVNCWSYQNRILKIDTETDKVVD-------------------------ELTI--------------------  170 (328)
T ss_dssp             E--ETTEEEEEECTTCCEEEEEETTTTEEEE-------------------------EEEC--------------------
T ss_pred             E--ECCEEEEEcCCCCCEEEEEECCCCeEEE-------------------------EEEc--------------------
Confidence            7  344455444  47889999987653210                         0000                    


Q ss_pred             ceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceee
Q psy10063        659 GVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTW  738 (894)
Q Consensus       659 ~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~  738 (894)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (328)
T 3dsm_A          171 --------------------------------------------------------------------------------  170 (328)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC----------CcEEEEEccCCceeecccc----CCCc
Q psy10063        739 GHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD----------KVSERYRDRKNKATAGFLL----SCPD  804 (894)
Q Consensus       739 ~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D----------g~I~iwd~~~~~~~~~~~~----~~~~  804 (894)
                                           ......++++++|++++++..+          +.|.+||..+++....+..    ....
T Consensus       171 ---------------------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~  229 (328)
T 3dsm_A          171 ---------------------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE  229 (328)
T ss_dssp             ---------------------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEE
T ss_pred             ---------------------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCcee
Confidence                                 0001234455666655555443          6799999888776654433    3457


Q ss_pred             eEeecCCCeEEEEecCCCCceeEEEeecCCcceeee--ccCCCCCeeEEEEee-CCcEEEEe----cCCCcEEEEecCcc
Q psy10063        805 FLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHP-DGKSYASG----GEDGFVRLHTFDQA  877 (894)
Q Consensus       805 ~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~--l~gH~~~V~~l~fSp-dg~~LaS~----s~Dg~V~vWdl~~~  877 (894)
                      ++|++|+++++++..      .|++||.++++....  +..+......|+++| +++++++.    ..++.|.+|+.+ +
T Consensus       230 la~~~d~~~lyv~~~------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g  302 (328)
T 3dsm_A          230 VQLNGTRDTLYWINN------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G  302 (328)
T ss_dssp             EEECTTSCEEEEESS------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred             EEEecCCCEEEEEcc------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence            889999999988765      389999998876432  222346788999999 56666776    678999999998 7


Q ss_pred             cccccccc
Q psy10063        878 YFDYTFDI  885 (894)
Q Consensus       878 ~~~~~~~~  885 (894)
                      +++..+..
T Consensus       303 ~~~~~i~~  310 (328)
T 3dsm_A          303 KLIDEFYV  310 (328)
T ss_dssp             CEEEEEEE
T ss_pred             CEEEEEEe
Confidence            77777754

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.58  E-value=1.2e-13  Score=151.84  Aligned_cols=111  Identities=11%  Similarity=-0.058  Sum_probs=73.6

Q ss_pred             ceEEEeeCCCCCEEEEecCCC-------cEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCC----CceeEEEe
Q psy10063        762 IGFKMPEPPKREKLALALADK-------VSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKV----GKFDARFY  830 (894)
Q Consensus       762 ~v~~la~spdg~~Latgs~Dg-------~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~----g~~~I~vw  830 (894)
                      .+..++|+||| +++++..++       ...||.+..++. ..+........++|||++|+.++.+..    ....|++|
T Consensus       172 ~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~  249 (347)
T 2gop_A          172 RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIY  249 (347)
T ss_dssp             TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEE
T ss_pred             CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccCcceeeECCCCCEEEEEEccccCCccccceEEEE
Confidence            35577888888 666665442       345554443322 222111233345999999988876542    12368888


Q ss_pred             ecCCcceeeeccCCCCCeeE-EEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063        831 HLIFEEEFARIKGHFGPINS-LAFHPDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       831 d~~tg~~l~~l~gH~~~V~~-l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      |  .++....+.+|...|.. +.|+ || ++++++.|+.++|| +..++.
T Consensus       250 d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~  294 (347)
T 2gop_A          250 D--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI  294 (347)
T ss_dssp             C--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred             C--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence            8  66666556677888886 9999 98 99999999999999 874443

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.58  E-value=4.8e-13  Score=146.30  Aligned_cols=161  Identities=14%  Similarity=0.203  Sum_probs=122.4

Q ss_pred             CCCEEEEEEccCCCEEEEecCC------------------------CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAK------------------------GDICTWDLRMGRELESISGHAKEPINDMQFSKDA  464 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~D------------------------g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg  464 (894)
                      -+.|.+|+|+++|+++++...+                        +.|++||..+|+.+..+.......+..|+|+++|
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            3668888888888888777666                        4799999999998877653332278999999999


Q ss_pred             CEEEEEeCCCCc----------------------------cceEEEEEec-CCCEEEEEE-CCCCEEEEEcCCCcEEEEE
Q psy10063        465 TMFITASHSQAV----------------------------EPINDMQFSK-DATMFITAS-KDHTAKLFTTHDRQLLKTY  514 (894)
Q Consensus       465 ~~la~~~~d~~i----------------------------~~V~~l~~sp-dg~~L~sgs-~Dg~V~iwdl~~~~~~~~~  514 (894)
                      +++++...++.+                            ....+|+|+| +|.++++.+ .++.|++|| .+++.+..+
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~  181 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW  181 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred             CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence            977766544332                            1477899999 788888876 689999999 678887777


Q ss_pred             eCC-----------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEE
Q psy10063        515 TTE-----------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAF  581 (894)
Q Consensus       515 ~~~-----------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~  581 (894)
                      ...           .....|+|++++..|+++......             |++|+..+++.+..+.  .+...+.+++|
T Consensus       182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-------------I~~~~~~~G~~~~~~~~~~~~~~~~~~~~  248 (329)
T 3fvz_A          182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-------------IQCFKTDTKEFVREIKHASFGRNVFAISY  248 (329)
T ss_dssp             CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-------------EEEEETTTCCEEEEECCTTTTTCEEEEEE
T ss_pred             ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-------------EEEEECCCCcEEEEEeccccCCCcceeee
Confidence            531           238899999996666666554432             8999998888888773  46678899999


Q ss_pred             ec
Q psy10063        582 HP  583 (894)
Q Consensus       582 sp  583 (894)
                      +|
T Consensus       249 ~p  250 (329)
T 3fvz_A          249 IP  250 (329)
T ss_dssp             ET
T ss_pred             cC
Confidence            98

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.58  E-value=9.8e-14  Score=168.07  Aligned_cols=161  Identities=7%  Similarity=-0.061  Sum_probs=104.7

Q ss_pred             cCCCCEEEEEEccCCCEEE-----EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        407 DQSAKITSLLWGNLDQYII-----TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~-----sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      +|...+.+++|||||++||     .|+.+..|+|||+.+|+.+.  ..+.. .+                      ....
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~-~~----------------------~~~~  172 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIE-GG----------------------KYAT  172 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBS-CC----------------------TTCC
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccC-cc----------------------cccc
Confidence            4555799999999999998     44556789999999988641  11111 01                      1145


Q ss_pred             EEEecCCCEEEEEECCCC-------------EEEEEcCCCcE--EEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        482 MQFSKDATMFITASKDHT-------------AKLFTTHDRQL--LKTYTT---ERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~-------------V~iwdl~~~~~--~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                      ++|+|||+.|+.++.|..             |++|++.+++.  ...+..   ...+.+++|+|||++|++.+.++.   
T Consensus       173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---  249 (695)
T 2bkl_A          173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW---  249 (695)
T ss_dssp             CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT---
T ss_pred             eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC---
Confidence            667777777777766654             99999998762  233332   257889999999999998876551   


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe---CCCcEEEEECCC
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG---EDGFLISNTLSN  604 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs---~Dg~I~vwdl~~  604 (894)
                             ...+|++|+...++ +..+..+...+....| ++|++++...   .++.|.+|+++.
T Consensus       250 -------~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~  304 (695)
T 2bkl_A          250 -------SENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK  304 (695)
T ss_dssp             -------TEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB
T ss_pred             -------CceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC
Confidence                   01136667665554 3444556666667767 5666444433   246677777654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.57  E-value=1.9e-13  Score=164.47  Aligned_cols=289  Identities=10%  Similarity=-0.031  Sum_probs=166.9

Q ss_pred             ceEEEEEecCCCEEEEE--ECCCCEEEEEcCCCcEEEEEe-CCCCee---------EEEEc--CCCCE-EEEEECCCCeE
Q psy10063        478 PINDMQFSKDATMFITA--SKDHTAKLFTTHDRQLLKTYT-TERPVN---------SAALS--PILPH-VVLGGGQEARE  542 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sg--s~Dg~V~iwdl~~~~~~~~~~-~~~~v~---------~l~~s--pdg~~-l~~~~~~~~~~  542 (894)
                      .|.+++|++++.+++..  +.++...||....+...+.+. +...+.         .++|+  |||++ |+++.....  
T Consensus        25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~--  102 (662)
T 3azo_A           25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ--  102 (662)
T ss_dssp             CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC--
T ss_pred             ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC--
Confidence            57777888765556665  457889999865444444443 344445         56565  99999 777665321  


Q ss_pred             EEeccCccceeeEEEEecc--ccceEEEccC-----CCCCeEEEEEecCCCEEEEEeCC----------CcEEEEECCC-
Q psy10063        543 VTTTSTKVGKFDARFYHLI--FEEEFARIKG-----HFGPINSLAFHPDGKSYASGGED----------GFLISNTLSN-  604 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~--~~~~~~~l~~-----h~~~V~~l~~spdg~~l~sgs~D----------g~I~vwdl~~-  604 (894)
                                 .|++|++.  .......+..     |...+.+++|+|||++|++++.|          ..|++|++.. 
T Consensus       103 -----------~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~  171 (662)
T 3azo_A          103 -----------RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS  171 (662)
T ss_dssp             -----------CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred             -----------eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence                       25666665  2033445555     66788999999999999998876          5799999987 


Q ss_pred             -----Ccc--cc--CCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063        605 -----GLD--IS--EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM  675 (894)
Q Consensus       605 -----~~~--~~--~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~  675 (894)
                           ++.  +.  ....+..++|+|||+.++...     +.. .....           ....|.+|+           
T Consensus       172 ~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~-----~~~-~~~~~-----------~~~~i~~~d-----------  223 (662)
T 3azo_A          172 AAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLA-----WDH-PRMPW-----------EGTELKTAR-----------  223 (662)
T ss_dssp             TTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEE-----ECT-TCCTT-----------TCEEEEEEE-----------
T ss_pred             ccccCCceeEEEecCCCcccCceECCCCCEEEEEE-----CCC-CCCCC-----------CCcEEEEEE-----------
Confidence                 432  11  123455667777776552110     000 00000           001111111           


Q ss_pred             cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccc-cCcccccCCCCcc
Q psy10063        676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHI-EGTPFKLDGSDTP  754 (894)
Q Consensus       676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~-~g~~~~~dg~~~~  754 (894)
                                                                                      .. .+..    +....
T Consensus       224 ----------------------------------------------------------------~~~~g~~----~~~~~  235 (662)
T 3azo_A          224 ----------------------------------------------------------------VTEDGRF----ADTRT  235 (662)
T ss_dssp             ----------------------------------------------------------------ECTTSCE----EEEEE
T ss_pred             ----------------------------------------------------------------ECCCCcc----cccEE
Confidence                                                                            10 0000    00111


Q ss_pred             eecCCCCceEEEeeCCCCCEEEEecCCC--cEEEEEccCCceeecc--cc---------CCCceEeecCCCeEEEEecCC
Q psy10063        755 ILAGPVDIGFKMPEPPKREKLALALADK--VSERYRDRKNKATAGF--LL---------SCPDFLFDFDTTREVTTTSTK  821 (894)
Q Consensus       755 ~~~~h~~~v~~la~spdg~~Latgs~Dg--~I~iwd~~~~~~~~~~--~~---------~~~~~~fS~dg~~l~~as~d~  821 (894)
                      +..+|...+..++|+|||++++++..++  .|++|++..++...-.  ..         +...++|+++++.++++.. +
T Consensus       236 l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~  314 (662)
T 3azo_A          236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G  314 (662)
T ss_dssp             EEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred             eCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence            2334456788999999999888888888  4555555455432211  11         1345778889888777765 3


Q ss_pred             CCceeEEEeecCCcceeeeccCCCCCeeEE-EEeeCCcEEEEecCCCc--EEEEecCcccc
Q psy10063        822 VGKFDARFYHLIFEEEFARIKGHFGPINSL-AFHPDGKSYASGGEDGF--VRLHTFDQAYF  879 (894)
Q Consensus       822 ~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l-~fSpdg~~LaS~s~Dg~--V~vWdl~~~~~  879 (894)
                        ...|+++|+..++ +..+..|.+.|..+ +++.+.-++++++.+..  |++|++.++++
T Consensus       315 --~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~  372 (662)
T 3azo_A          315 --AAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA  372 (662)
T ss_dssp             --SCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             --ccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence              2234444766555 67788888888777 44433334455566654  44555556554

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.57  E-value=1.2e-11  Score=132.05  Aligned_cols=280  Identities=10%  Similarity=-0.019  Sum_probs=180.5

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe-cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI-SGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l-~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      +.+..+...+.+|+++++|+++++...++.|.+||.. ++..... ..+..                         .+.+
T Consensus         8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~-------------------------~~~~   61 (299)
T 2z2n_A            8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDA-------------------------KVMC   61 (299)
T ss_dssp             EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTC-------------------------CEEE
T ss_pred             EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccC-------------------------ceee
Confidence            3455677899999999999988877768899999988 6543322 11222                         5777


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      |++.++|.++++...++.|.+||.. ++. ..+.   ....+.++++.++|.++++....+.              |.+|
T Consensus        62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--------------i~~~  125 (299)
T 2z2n_A           62 LTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNR--------------IGRI  125 (299)
T ss_dssp             EEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTE--------------EEEE
T ss_pred             EEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCce--------------EEEE
Confidence            8888888877776667889999876 443 3333   2457899999999976665555554              6667


Q ss_pred             eccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        559 HLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       559 d~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      |. .++... .+..+...+.+++++++|+++++...++.|.+|+. .++..                          .+.
T Consensus       126 d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~--------------------------~~~  177 (299)
T 2z2n_A          126 TD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT--------------------------EFK  177 (299)
T ss_dssp             CT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE--------------------------EEE
T ss_pred             CC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE--------------------------Eee
Confidence            76 343332 23334567899999999987776666677888876 22100                          000


Q ss_pred             cccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCC
Q psy10063        638 SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGT  717 (894)
Q Consensus       638 ~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~  717 (894)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (299)
T 2z2n_A          178 --------------------------------------------------------------------------------  177 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec
Q psy10063        718 RLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG  797 (894)
Q Consensus       718 ~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~  797 (894)
                                                            +..+...+.+|++.+++.++++...++.|.+|+. .++....
T Consensus       178 --------------------------------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~  218 (299)
T 2z2n_A          178 --------------------------------------IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF  218 (299)
T ss_dssp             --------------------------------------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred             --------------------------------------CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE
Confidence                                                  0001123456778888887777666788888987 5443221


Q ss_pred             -cc---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee-ccCCCCCeeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063        798 -FL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR-IKGHFGPINSLAFHPDGKSYASGGEDGFVRLH  872 (894)
Q Consensus       798 -~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~-l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vW  872 (894)
                       ..   .....++++++|...++....+    .|.+||.. ++.... +..+...+.+|++ ++|+++++.+ .+.|..+
T Consensus       219 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~----~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~  291 (299)
T 2z2n_A          219 KIPTPNARPHAITAGAGIDLWFTEWGAN----KIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKL  291 (299)
T ss_dssp             ECSSTTCCEEEEEECSTTCEEEEETTTT----EEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEE
T ss_pred             ECCCCCCCceeEEECCCCCEEEeccCCc----eEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEE
Confidence             11   2234577888887444433333    59999984 543322 3456678999999 9998877766 4567777


Q ss_pred             ecCccc
Q psy10063        873 TFDQAY  878 (894)
Q Consensus       873 dl~~~~  878 (894)
                      +.+.+.
T Consensus       292 ~~~~~~  297 (299)
T 2z2n_A          292 TLIKDN  297 (299)
T ss_dssp             EEC---
T ss_pred             EcCccc
Confidence            776553

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.57  E-value=1.4e-12  Score=143.30  Aligned_cols=297  Identities=9%  Similarity=-0.032  Sum_probs=190.7

Q ss_pred             EEEccCCCEEEEecC-----CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        415 LLWGNLDQYIITGHA-----KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       415 l~~spdg~~L~sgs~-----Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ....|++++|+....     ++.|.++|..+++.+..+..... +  .++++|||++|+++..           +.+.+ 
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P--~va~spDG~~lyVan~-----------~~~r~-  102 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P--NPVVADDGSFIAHAST-----------VFSRI-  102 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEE-----------EEEET-
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C--cEEECCCCCEEEEEcc-----------ccccc-
Confidence            344678887777654     57999999999999999886554 2  2555555444332210           00000 


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECC--CCeEEEeccCccceeeEEEEe
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQ--EAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~--~~~~v~~~~~~~~~~~v~vwd  559 (894)
                        .-|..++.|.+||..+++.+..+...        .....++|+|||++|+++...  +.              |.++|
T Consensus       103 --~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~--------------VsVID  166 (386)
T 3sjl_D          103 --ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA--------------VGVVD  166 (386)
T ss_dssp             --TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE--------------EEEEE
T ss_pred             --ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe--------------EEEEE
Confidence              01224678999999999999888642        256789999999999998753  33              88999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      +.+++.+..+....  . ...+....+.|++.+.||.+.+.++.....+                 .        .... 
T Consensus       167 ~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-----------------~--------~~~~-  217 (386)
T 3sjl_D          167 LEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-----------------E--------ITHT-  217 (386)
T ss_dssp             TTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC-----------------E--------EEEC-
T ss_pred             CCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeE-----------------E--------Eeec-
Confidence            99999988875321  1 2334334567788889999988887541100                 0        0000 


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                      ..                                                                              
T Consensus       218 ~~------------------------------------------------------------------------------  219 (386)
T 3sjl_D          218 EV------------------------------------------------------------------------------  219 (386)
T ss_dssp             CC------------------------------------------------------------------------------
T ss_pred             ce------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEee-CCCCCEEEEecCCCcEEEEEccCCc--eee
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPE-PPKREKLALALADKVSERYRDRKNK--ATA  796 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~-spdg~~Latgs~Dg~I~iwd~~~~~--~~~  796 (894)
                                                +..+..  .++       ....| .++|++++ .+.+|.|++.|.....  .+.
T Consensus       220 --------------------------~~~~~~--~~~-------~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~  263 (386)
T 3sjl_D          220 --------------------------FHPEDE--FLI-------NHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLP  263 (386)
T ss_dssp             --------------------------CSCTTS--CBC-------SCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECC
T ss_pred             --------------------------eccccc--ccc-------ccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeec
Confidence                                      000000  000       00122 35665544 3446788888876543  222


Q ss_pred             cc-------------ccCCCceEeecCCCeEEEEecCC------CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCC
Q psy10063        797 GF-------------LLSCPDFLFDFDTTREVTTTSTK------VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDG  857 (894)
Q Consensus       797 ~~-------------~~~~~~~~fS~dg~~l~~as~d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg  857 (894)
                      .+             ..+...+++++++++++++...+      ...-+|.++|+++++.++.+... ..+++|+|++|+
T Consensus       264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~  342 (386)
T 3sjl_D          264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDE  342 (386)
T ss_dssp             CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSS
T ss_pred             ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCC
Confidence            21             12344678899999999876421      11126999999999999888643 368899999999


Q ss_pred             c-EEEE-ecCCCcEEEEecCccccccccccC
Q psy10063        858 K-SYAS-GGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       858 ~-~LaS-~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      + +|++ ...++.|.|+|...++.+..++..
T Consensus       343 ~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~  373 (386)
T 3sjl_D          343 KPLLYALSTGDKTLYIHDAESGEELRSVNQL  373 (386)
T ss_dssp             SCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred             CeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence            7 5555 567999999999999998887754

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.56  E-value=8.1e-14  Score=168.80  Aligned_cols=117  Identities=11%  Similarity=0.016  Sum_probs=77.7

Q ss_pred             ceEEEEEecCCCEEEE-----EECCCCEEEEEcCCCcEE-EEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        478 PINDMQFSKDATMFIT-----ASKDHTAKLFTTHDRQLL-KTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       478 ~V~~l~~spdg~~L~s-----gs~Dg~V~iwdl~~~~~~-~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      .+.+++|||||++||.     |+.+..|++||+.+++.+ ...........++|+|||+.|++++.+....- .......
T Consensus       122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~-~~~~~~~  200 (695)
T 2bkl_A          122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI-KVDERPG  200 (695)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTS-CGGGGGG
T ss_pred             EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCC-ccccCCC
Confidence            4666777777777763     344568999999999875 21111222378999999999999987652000 0000012


Q ss_pred             eeeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        552 KFDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       552 ~~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      ..+|++|++.++.    ++.....|...+.++.|+|||++|+.++.++
T Consensus       201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  248 (695)
T 2bkl_A          201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG  248 (695)
T ss_dssp             GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred             CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence            3358899988765    3444445667889999999999988877655

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.54  E-value=1.1e-12  Score=138.45  Aligned_cols=154  Identities=6%  Similarity=-0.029  Sum_probs=100.7

Q ss_pred             CEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        411 KITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       411 ~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ...+|+++++|++++ +...++.|.+||...+........+..                         .+.+|+++++|+
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------------------------~p~~i~~~~~g~   79 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY-------------------------QPQGLAVDGAGT   79 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC-------------------------SCCCEEECTTCC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC-------------------------CcceeEECCCCC
Confidence            788999999999777 546788999999765442221111111                         467788888888


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      ++++.. ++.|++||............ ...+.+++++++|+.+++....+.              |.+|+.........
T Consensus        80 l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~--------------i~~~~~~~~~~~~~  144 (270)
T 1rwi_B           80 VYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR--------------VVKLAAGSKTQTVL  144 (270)
T ss_dssp             EEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTE--------------EEEECTTCCSCEEC
T ss_pred             EEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCE--------------EEEEECCCceeEee
Confidence            665554 88899999876544322112 367899999999985555545554              55666544443332


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      ...+...+.+|+++++|+++++...++.|++|+.+.
T Consensus       145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~  180 (270)
T 1rwi_B          145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  180 (270)
T ss_dssp             CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence            233344678899999998777766678888887643

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.54  E-value=2.7e-12  Score=136.96  Aligned_cols=180  Identities=12%  Similarity=0.140  Sum_probs=135.0

Q ss_pred             CCCCEEEEEE-ccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063        408 QSAKITSLLW-GNLDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---------  476 (894)
Q Consensus       408 H~~~V~~l~~-spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------  476 (894)
                      |...+.+++| .++++++++... ++.|++|| ..++.+..+.......+.+|+++++|+++++...++.+         
T Consensus        75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~  153 (286)
T 1q7f_A           75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV  153 (286)
T ss_dssp             CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred             cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE
Confidence            4467899999 477776666643 78999999 66887777754332378999999999877765544433         


Q ss_pred             ----------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEECCC-CeE
Q psy10063        477 ----------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGGQE-ARE  542 (894)
Q Consensus       477 ----------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~~~-~~~  542 (894)
                                ..+.+|+++++|+++++...++.|++||. .++.+..+...   ..+.+|+++++|.++++...++ .  
T Consensus       154 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~--  230 (286)
T 1q7f_A          154 LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN--  230 (286)
T ss_dssp             EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE--
T ss_pred             EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE--
Confidence                      25788999999998888778899999997 56667667543   5789999999998777766554 4  


Q ss_pred             EEeccCccceeeEEEEeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                                  |++|+. .++.+..+..+..  .+.+++|+++|+++++ +.|+.|++|++...
T Consensus       231 ------------i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          231 ------------LTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             ------------EEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             ------------EEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence                        777874 3566666654433  4789999999987666 67999999998653

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.52  E-value=6.2e-12  Score=137.24  Aligned_cols=168  Identities=12%  Similarity=0.064  Sum_probs=115.8

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ...+.+|...+.+++|+++|++++++..++.|++||...++....+..+..                         .+.+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------------------------~~~~   91 (333)
T 2dg1_A           37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA-------------------------NPAA   91 (333)
T ss_dssp             EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS-------------------------SEEE
T ss_pred             eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC-------------------------Ccce
Confidence            335667888899999999999888888899999999988876554433433                         5777


Q ss_pred             EEEecCCCEEEEEECC----CCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        482 MQFSKDATMFITASKD----HTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       482 l~~spdg~~L~sgs~D----g~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      |+|+++|+++++...+    +.|.+||.+.++....+.   ....+.+++++++|+++++......        ......
T Consensus        92 i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~--------~~~~~~  163 (333)
T 2dg1_A           92 IKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS--------TNPLGG  163 (333)
T ss_dssp             EEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT--------TBCCEE
T ss_pred             EEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccc--------cCCCce
Confidence            7888888777766655    689999998877664443   2357899999999987665543100        000011


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS  603 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~  603 (894)
                      |..|+...++... +..+...+.+++|+++|++|+.+ ..++.|++|+++
T Consensus       164 l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~  212 (333)
T 2dg1_A          164 VYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALE  212 (333)
T ss_dssp             EEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             EEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence            4555554443332 22333457899999999866544 457889999875

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.51  E-value=2.9e-12  Score=143.47  Aligned_cols=290  Identities=11%  Similarity=-0.008  Sum_probs=182.6

Q ss_pred             cCCCEEEEecC-C----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        419 NLDQYIITGHA-K----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       419 pdg~~L~sgs~-D----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      +++++|+.... +    +.|.++|+.+++.+..+..... +  .++|+|||++|+++...          +.    +...
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~----------~~----~~~~  144 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTV----------FE----RIAR  144 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEE----------EE----ETTE
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEecc----------cc----cccc
Confidence            46666665543 2    6899999999999999986554 2  45555554444322100          00    0001


Q ss_pred             EECCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeEEEEeccccc
Q psy10063        494 ASKDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       494 gs~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      |..++.|.++|..+++.+..+...        .....++|+|||++|+++... ..             .|.++|+.+++
T Consensus       145 G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~-------------~VsVID~~t~k  211 (426)
T 3c75_H          145 GKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP-------------AVGVVDLEGKT  211 (426)
T ss_dssp             EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC-------------EEEEEETTTTE
T ss_pred             CCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC-------------eEEEEECCCCe
Confidence            224678999999999999887642        346789999999999998753 22             28889999999


Q ss_pred             eEEEccCCCCCeEEEEEecCC-CEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCC
Q psy10063        565 EFARIKGHFGPINSLAFHPDG-KSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSS  643 (894)
Q Consensus       565 ~~~~l~~h~~~V~~l~~spdg-~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~  643 (894)
                      .+..+....    +....|+| +.+++.+.||.+.+.++..++..                          ......+  
T Consensus       212 vv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~--------------------------~~~~~~~--  259 (426)
T 3c75_H          212 FDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGETK--------------------------VTNTEVF--  259 (426)
T ss_dssp             EEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCCE--------------------------EEECCCC--
T ss_pred             EEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEE--------------------------EEeeeee--
Confidence            888775321    12334443 56677778888888777332210                          0000000  


Q ss_pred             CCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecc
Q psy10063        644 TDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNP  723 (894)
Q Consensus       644 ~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~  723 (894)
                                                                                                      
T Consensus       260 --------------------------------------------------------------------------------  259 (426)
T 3c75_H          260 --------------------------------------------------------------------------------  259 (426)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee--ec----
Q psy10063        724 FDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT--AG----  797 (894)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~--~~----  797 (894)
                                             .....         .....+.|.+++..++.....+.|.+.|.......  ..    
T Consensus       260 -----------------------~v~~~---------p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~  307 (426)
T 3c75_H          260 -----------------------HTEDE---------LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL  307 (426)
T ss_dssp             -----------------------SCTTS---------CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred             -----------------------ccCCC---------ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence                                   00000         00001234555555555555666666666433211  00    


Q ss_pred             ---------cccCCCceEeecCCCeEEEEecCC------CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEE
Q psy10063        798 ---------FLLSCPDFLFDFDTTREVTTTSTK------VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYA  861 (894)
Q Consensus       798 ---------~~~~~~~~~fS~dg~~l~~as~d~------~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~La  861 (894)
                               ...+...++|++|+++++++...+      .+.-+|.|+|+++++.++.+.... ..++|+|++||+ +|+
T Consensus       308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~ly  386 (426)
T 3c75_H          308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLY  386 (426)
T ss_dssp             CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEE
T ss_pred             cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEE
Confidence                     112233478999999988875421      112269999999999998886432 478999999999 787


Q ss_pred             Eec-CCCcEEEEecCcccccccc
Q psy10063        862 SGG-EDGFVRLHTFDQAYFDYTF  883 (894)
Q Consensus       862 S~s-~Dg~V~vWdl~~~~~~~~~  883 (894)
                      ++. .++.|.|+|+...+.+..+
T Consensus       387 v~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          387 ALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             EEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEcCCCCeEEEEECCCCCEEEEe
Confidence            776 5999999999999988775

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.50  E-value=7e-12  Score=137.03  Aligned_cols=151  Identities=11%  Similarity=0.002  Sum_probs=110.2

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ....++++. +++++++...++.|.+||..+++.+..+....                          ....|+|+++++
T Consensus        44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~--------------------------~p~~i~~~~~g~   96 (328)
T 3dsm_A           44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFT--------------------------SPRYIHFLSDEK   96 (328)
T ss_dssp             SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCS--------------------------SEEEEEEEETTE
T ss_pred             ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCC--------------------------CCcEEEEeCCCe
Confidence            456777774 45555666667899999999999988885432                          467788888885


Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCCC------CeeEEEEcCCCCEEEEEEC--CCCeEEEeccCccceeeEEEEecc
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTER------PVNSAALSPILPHVVLGGG--QEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~------~v~~l~~spdg~~l~~~~~--~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      ++++...++.|.+||+++++++..+....      ....|++  ++.+|+++..  ++.              |.+||+.
T Consensus        97 lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~--------------v~viD~~  160 (328)
T 3dsm_A           97 AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNR--------------ILKIDTE  160 (328)
T ss_dssp             EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCE--------------EEEEETT
T ss_pred             EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCE--------------EEEEECC
Confidence            44444478999999999999988887655      6778888  5667777763  343              8899999


Q ss_pred             ccceEEEccCCCCCeEEEEEecCCCEEEEEeCC----------CcEEEEECCC
Q psy10063        562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGED----------GFLISNTLSN  604 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D----------g~I~vwdl~~  604 (894)
                      +++.+..+... .....++++++|++++++..+          +.|.+||.++
T Consensus       161 t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t  212 (328)
T 3dsm_A          161 TDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET  212 (328)
T ss_dssp             TTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred             CCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence            88888776543 345688899999876666544          5677776644

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.49  E-value=1.1e-12  Score=159.86  Aligned_cols=126  Identities=12%  Similarity=0.026  Sum_probs=82.5

Q ss_pred             ceEEEEEecCCCEEEEEECC-----CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        478 PINDMQFSKDATMFITASKD-----HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .+..++|||||++|+.++.+     ..|++||+.+++.+........+..++|+|| +.|+++..++....-........
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~  242 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN  242 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence            46778888888888776543     3599999999988764332233468899999 99999887654100000011113


Q ss_pred             eeEEEEeccccc----eEEEccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCC
Q psy10063        553 FDARFYHLIFEE----EFARIKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSN  604 (894)
Q Consensus       553 ~~v~vwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~  604 (894)
                      ..|++|++.++.    .+.....|...+.++.|+|||++|+..+.++     .|++||++.
T Consensus       243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~  303 (741)
T 1yr2_A          243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN  303 (741)
T ss_dssp             CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred             CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence            348888887665    2333333444688999999999988877544     577777643

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.48  E-value=3.1e-12  Score=155.99  Aligned_cols=172  Identities=9%  Similarity=0.035  Sum_probs=105.4

Q ss_pred             CCEEEEEEccCCCEEEEecCC-----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        410 AKITSLLWGNLDQYIITGHAK-----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~D-----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ..+.+++|||||++|+.++.+     ..|+|||+.+|+.+.... +.. .+..++|+|| +.|++++.+....       
T Consensus       163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~-~~~~~~wspD-~~l~~~~~~~~~~-------  232 (741)
T 1yr2_A          163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWV-KFSGLAWLGN-DALLYSRFAEPKE-------  232 (741)
T ss_dssp             EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEE-ESCCCEESTT-SEEEEEECCCC---------
T ss_pred             EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCc-eeccEEEECC-CEEEEEEecCccc-------
Confidence            367889999999999887543     469999999998765321 111 1235566666 6665555443210       


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeCC---CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQL--LKTYTTE---RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                         +..+........|++|++.+++.  ...+...   ..+..+.|+|||++|++.+.++.         ....+|++||
T Consensus       233 ---~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~~l~~~d  300 (741)
T 1yr2_A          233 ---GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT---------DPVNTVHVAR  300 (741)
T ss_dssp             ---------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT---------CSCCEEEEEE
T ss_pred             ---ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC---------CCcceEEEEE
Confidence               00000111234589999987662  2333332   25889999999999998876541         0112388899


Q ss_pred             cccc--ceEEEccCCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCC
Q psy10063        560 LIFE--EEFARIKGHFGPINSLAFHPDGKSYASGGED----GFLISNTLSN  604 (894)
Q Consensus       560 ~~~~--~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~  604 (894)
                      +..+  ++...+..+...+.... +++|+.|+..+.+    +.|.+|+++.
T Consensus       301 ~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~  350 (741)
T 1yr2_A          301 VTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSG  350 (741)
T ss_dssp             EETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred             CCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            8876  31455555655555554 4888888877654    3377777643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.46  E-value=7.5e-12  Score=133.10  Aligned_cols=237  Identities=12%  Similarity=0.064  Sum_probs=166.1

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC--CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTTER--PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~--~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      .+++|++++.|+.|++||.++|+.+..+..+.  .+.+++++|+|++|+  +.++.              |+.||. +|+
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~--------------V~~~d~-~G~   66 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKG--------------AKMITR-DGR   66 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSE--------------EEEECT-TSC
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCC--------------EEEECC-CCC
Confidence            46789999999999999999999999998653  789999999999888  33333              778888 688


Q ss_pred             eEEEccCCC-CCeEEEEEecCCCEEEEEeC-CCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        565 EFARIKGHF-GPINSLAFHPDGKSYASGGE-DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       565 ~~~~l~~h~-~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      .+..+..+. ..+.++.+.++|++|++.+. ++.|..++.                   +|+++       ..+...   
T Consensus        67 ~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-------------------~Gk~l-------~~~~~~---  117 (276)
T 3no2_A           67 ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-------------------KGEVL-------SKTEFE---  117 (276)
T ss_dssp             EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-------------------TSCEE-------EEEEEC---
T ss_pred             EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-------------------CCCEE-------EEEecc---
Confidence            887777643 47889999999999998876 555555543                   12211       000000   


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                                                                                      
T Consensus       118 --------------------------------------------------------------------------------  117 (276)
T 3no2_A          118 --------------------------------------------------------------------------------  117 (276)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc--
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL--  800 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~--  800 (894)
                                                 +.    ..++......+++.++|.+|++...++.|++||.. ++.+..+..  
T Consensus       118 ---------------------------~~----~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~  165 (276)
T 3no2_A          118 ---------------------------TG----IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG  165 (276)
T ss_dssp             ---------------------------CS----CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS
T ss_pred             ---------------------------CC----CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC
Confidence                                       00    00000011234567889999999999999999988 888776654  


Q ss_pred             CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCC------CCeeEEEEeeCCcEEEEec--CC------
Q psy10063        801 SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHF------GPINSLAFHPDGKSYASGG--ED------  866 (894)
Q Consensus       801 ~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~------~~V~~l~fSpdg~~LaS~s--~D------  866 (894)
                      ....+.+.++|..+++....+    .|+.||.++|+.+..+..+.      ..+..++..++|.++++..  ..      
T Consensus       166 ~~~~~~~~~~g~~~v~~~~~~----~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~  241 (276)
T 3no2_A          166 TPFSSAFLDNGDCLVACGDAH----CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKG  241 (276)
T ss_dssp             CCCEEEECTTSCEEEECBTTS----EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGS
T ss_pred             CccceeEcCCCCEEEEeCCCC----eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCcccccccc
Confidence            344566788888887766554    59999999999988775432      2378889999999888873  21      


Q ss_pred             CcEEEEec-Ccccccccccc
Q psy10063        867 GFVRLHTF-DQAYFDYTFDI  885 (894)
Q Consensus       867 g~V~vWdl-~~~~~~~~~~~  885 (894)
                      +..+++++ .+++++..|.-
T Consensus       242 ~~~~~~~~~~~g~~~W~~~~  261 (276)
T 3no2_A          242 KHPQLVEIDSEGKVVWQLND  261 (276)
T ss_dssp             CCCSEEEECTTSBEEEEECC
T ss_pred             CCceEEEECCCCCEEEEecC
Confidence            23456666 45666666653

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.43  E-value=5.3e-10  Score=119.28  Aligned_cols=157  Identities=7%  Similarity=-0.044  Sum_probs=108.7

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .+......+.+|++.++|+++++...++.|.+||.. ++.... +..+..                         .+.+|
T Consensus        14 ~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~-------------------------~~~~i   67 (300)
T 2qc5_A           14 NLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDA-------------------------KVMCL   67 (300)
T ss_dssp             ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-------------------------CEEEE
T ss_pred             ecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCC-------------------------cceeE
Confidence            344556789999999999988887778899999988 654432 111112                         57788


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      ++.++|.++++...++.|.+||.. ++......  ....+.++++.++|+++++....+.              |.+|+.
T Consensus        68 ~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~--------------i~~~~~  132 (300)
T 2qc5_A           68 IVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDR--------------IGKLTA  132 (300)
T ss_dssp             EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE--------------EEEECT
T ss_pred             EECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCe--------------EEEECC
Confidence            888888877766667889999988 66532221  2367899999999986665544554              666666


Q ss_pred             cccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        561 IFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       561 ~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      . ++... .+......+.+++++++|+++++...++.|.+|+.
T Consensus       133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~  174 (300)
T 2qc5_A          133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN  174 (300)
T ss_dssp             T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred             C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence            6 44432 23334567889999999986666655677877765

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.41  E-value=2e-11  Score=134.27  Aligned_cols=159  Identities=13%  Similarity=0.082  Sum_probs=99.7

Q ss_pred             CCEEEEEEccCCCEEEEec--CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        410 AKITSLLWGNLDQYIITGH--AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs--~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      ..+..|+++++|+++++..  .++.++||.+..++. ..+.....                  ...+.+..+.+|+|+++
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~------------------~~~~~~~~p~gv~~d~~   77 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSG------------------NAIITFDTVLGIKSDGN   77 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCS------------------SCCCCCSCEEEEEECSS
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCccc------------------CcccceeEeeEEEEcCC
Confidence            7899999999999888863  234366776655543 33321100                  01122347888999998


Q ss_pred             CCEEEEEEC-----CCCEEEEEcCCCcEEEEEeCC-------CCeeEEEEcCCCCEEEEEEC---CCCeEEEeccCccce
Q psy10063        488 ATMFITASK-----DHTAKLFTTHDRQLLKTYTTE-------RPVNSAALSPILPHVVLGGG---QEAREVTTTSTKVGK  552 (894)
Q Consensus       488 g~~L~sgs~-----Dg~V~iwdl~~~~~~~~~~~~-------~~v~~l~~spdg~~l~~~~~---~~~~~v~~~~~~~~~  552 (894)
                      |+++++-..     ++.|.+||+.++++++.+...       ..+..+++++++.+++++..   ...            
T Consensus        78 g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~------------  145 (343)
T 2qe8_A           78 GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA------------  145 (343)
T ss_dssp             SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC------------
T ss_pred             CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC------------
Confidence            876665433     578999999999988877642       24689999987767766654   211            


Q ss_pred             eeEEEEeccccceEEEccCCCCCeE-EEEEecCCCEEEEEeCCCcEEEE
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPIN-SLAFHPDGKSYASGGEDGFLISN  600 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~-~l~~spdg~~l~sgs~Dg~I~vw  600 (894)
                       .|.+||+..++..+.+.+|..... .+.+..+|..|.+.+.+|.++.|
T Consensus       146 -~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  193 (343)
T 2qe8_A          146 -ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRP  193 (343)
T ss_dssp             -EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECC
T ss_pred             -eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceece
Confidence             288999988887777766533211 12333455555544555544433

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.40  E-value=4.6e-11  Score=128.14  Aligned_cols=209  Identities=10%  Similarity=0.078  Sum_probs=147.1

Q ss_pred             CccceeeeeccCcc-EEEecC-CCeE--------EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe
Q psy10063        378 LSVDRLNSMSPAAR-KLATNA-EPVV--------KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI  447 (894)
Q Consensus       378 ~~~~~~~~~s~dg~-~l~~~~-~~~~--------~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l  447 (894)
                      .......+|+++|+ +++... ...+        ...+..+...+.+|+|+++|+++++...++.|.+||..+|+....+
T Consensus        27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~  106 (296)
T 3e5z_A           27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA  106 (296)
T ss_dssp             CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred             CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence            33445667888887 333332 2222        2244567788999999999998888877789999999888765443


Q ss_pred             cCCC---CCCeeEEEEcCCCCEEEEE----eC-------------CCCc----------------cceEEEEEecCCCEE
Q psy10063        448 SGHA---KEPINDMQFSKDATMFITA----SH-------------SQAV----------------EPINDMQFSKDATMF  491 (894)
Q Consensus       448 ~~h~---~~~V~~v~~spdg~~la~~----~~-------------d~~i----------------~~V~~l~~spdg~~L  491 (894)
                      ....   ...+..++|+++|+++++.    ..             .+.+                .....++|+|+|++|
T Consensus       107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l  186 (296)
T 3e5z_A          107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL  186 (296)
T ss_dssp             CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE
T ss_pred             eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEE
Confidence            3211   1256789999999988862    20             1111                345789999999999


Q ss_pred             EEEECCCCEEEEEcC-CCcE---EEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063        492 ITASKDHTAKLFTTH-DRQL---LKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF  566 (894)
Q Consensus       492 ~sgs~Dg~V~iwdl~-~~~~---~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~  566 (894)
                      ++.+.++.|++||+. .+++   ...+. +...+.+|+++++|.++++.  .+.              |.+|+.. ++.+
T Consensus       187 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~--------------v~~~~~~-g~~~  249 (296)
T 3e5z_A          187 VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG--------------VHVLTPD-GDEL  249 (296)
T ss_dssp             EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE--------------EEEECTT-SCEE
T ss_pred             EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe--------------EEEECCC-CCEE
Confidence            777778999999997 5665   34442 23556789999999865555  443              8889886 7777


Q ss_pred             EEccCCCCCeEEEEE-ecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        567 ARIKGHFGPINSLAF-HPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       567 ~~l~~h~~~V~~l~~-spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ..+..+.. +.+++| .++++.|+.++.++ |..+++...
T Consensus       250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~  287 (296)
T 3e5z_A          250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR  287 (296)
T ss_dssp             EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred             EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence            78877777 999999 58889898888764 445555544

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.40  E-value=3.7e-11  Score=129.54  Aligned_cols=111  Identities=16%  Similarity=0.113  Sum_probs=78.2

Q ss_pred             eEEEeeC----CCCCEEEEe-cCCCcEEEEEcc-CCce-----eeccc----cCCCceEeecCCCeEEEEecCCCCceeE
Q psy10063        763 GFKMPEP----PKREKLALA-LADKVSERYRDR-KNKA-----TAGFL----LSCPDFLFDFDTTREVTTTSTKVGKFDA  827 (894)
Q Consensus       763 v~~la~s----pdg~~Latg-s~Dg~I~iwd~~-~~~~-----~~~~~----~~~~~~~fS~dg~~l~~as~d~~g~~~I  827 (894)
                      ...++++    +++++|+++ ..++.|++|+.. .++.     ...+.    .....++++++|...++...++    .|
T Consensus       174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~----~i  249 (314)
T 1pjx_A          174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS----HI  249 (314)
T ss_dssp             EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT----EE
T ss_pred             cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC----EE
Confidence            3456677    888665544 567889999876 3321     12221    1234577899997666655544    59


Q ss_pred             EEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEecCCCcEEEEecCcc
Q psy10063        828 RFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       828 ~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s~Dg~V~vWdl~~~  877 (894)
                      ++||.++++.+..+..+...+.+++|++||+ ++++...++.|.+|+++..
T Consensus       250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            9999988888877777778899999999999 4555666788999998753

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.39  E-value=7.6e-10  Score=122.87  Aligned_cols=153  Identities=7%  Similarity=-0.100  Sum_probs=98.0

Q ss_pred             EEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        414 SLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGH-AKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       414 ~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .++|+|||++|+.+.          .++.|.+||..+++.+..+... .. ...            .+      .....+
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~-~~~------------~g------~~p~~~  130 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP-RFD------------VG------PYSWMN  130 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcc-ccc------------cC------CCccce
Confidence            999999999999885          3678999999998888777532 11 000            00      024578


Q ss_pred             EEecCCCEEEEEEC--CCCEEEEEcCCCcEEEE-EeCCCCeeEEEEcCCCC-EEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        483 QFSKDATMFITASK--DHTAKLFTTHDRQLLKT-YTTERPVNSAALSPILP-HVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       483 ~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~-~~~~~~v~~l~~spdg~-~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      +|+|||++|+++..  +..|.++| .+++++.. +.....   +.+.++++ .+++.+.++.              +.++
T Consensus       131 ~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~--------------~~~v  192 (373)
T 2mad_H          131 ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGG--------------LAKT  192 (373)
T ss_pred             EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCC--------------EEEE
Confidence            88999998888774  47899999 99999888 665432   45556654 3444555565              5556


Q ss_pred             eccccceEEEcc------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        559 HLIFEEEFARIK------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       559 d~~~~~~~~~l~------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |. .++.+....      +.........+.+++..++..+.++.|.+.|+..
T Consensus       193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~  243 (373)
T 2mad_H          193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA  243 (373)
T ss_pred             EC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC
Confidence            66 555442211      1111123345666665555445677888888754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.37  E-value=7.8e-11  Score=125.19  Aligned_cols=190  Identities=13%  Similarity=0.062  Sum_probs=143.5

Q ss_pred             eeccCccEEEecC-CCeEEEEEecCC-CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063        385 SMSPAARKLATNA-EPVVKMQVTDQS-AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK  462 (894)
Q Consensus       385 ~~s~dg~~l~~~~-~~~~~~~l~~H~-~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp  462 (894)
                      +-+.++++.+... .+.+...+..|. ..+.+++++|+|++|++  .++.|++||. +|+.+..+..+....+.++.+.+
T Consensus        10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~   86 (276)
T 3no2_A           10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILP   86 (276)
T ss_dssp             ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT
T ss_pred             eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECC
Confidence            3344555444444 455666666666 57899999999998884  4678999999 79999999875433788999999


Q ss_pred             CCCEEEEEeC-CCCc-------c----------------ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC
Q psy10063        463 DATMFITASH-SQAV-------E----------------PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER  518 (894)
Q Consensus       463 dg~~la~~~~-d~~i-------~----------------~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~  518 (894)
                      +|++|++.+. .+.+       +                ....+++.++|.+|++...++.|.+||.+ |+.+..+....
T Consensus        87 dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~  165 (276)
T 3no2_A           87 DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG  165 (276)
T ss_dssp             TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS
T ss_pred             CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC
Confidence            9999988765 3322       1                12234567889999999999999999998 99999998877


Q ss_pred             CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC------CCCeEEEEEecCCCEEEEEe
Q psy10063        519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH------FGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h------~~~V~~l~~spdg~~l~sgs  592 (894)
                      .+.++.+.++|..|+++...+.              |..+|..+|+.+.++..+      ...+..++..++|.++++..
T Consensus       166 ~~~~~~~~~~g~~~v~~~~~~~--------------v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          166 TPFSSAFLDNGDCLVACGDAHC--------------FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             CCCEEEECTTSCEEEECBTTSE--------------EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             CccceeEcCCCCEEEEeCCCCe--------------EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            7888999999998888776654              677787777777776432      23477888888998777764

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.36  E-value=5.3e-11  Score=125.39  Aligned_cols=184  Identities=7%  Similarity=0.001  Sum_probs=132.5

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----------
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----------  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----------  476 (894)
                      +...+.+|+|+++|+++++.. ++.|++||...+.. ..+.......+.+|+++++|+++++...++.+           
T Consensus        65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~  142 (270)
T 1rwi_B           65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT  142 (270)
T ss_dssp             SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred             CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence            345788999999999666666 88999999875543 33432221278999999999876665443322           


Q ss_pred             -------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccC
Q psy10063        477 -------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTST  548 (894)
Q Consensus       477 -------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~  548 (894)
                             ..+.+|+++++|+++++...++.|++||...+........ ...+.+|+++++|..+++...++.        
T Consensus       143 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~--------  214 (270)
T 1rwi_B          143 VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ--------  214 (270)
T ss_dssp             ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC--------
T ss_pred             eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc--------
Confidence                   2567899999999777777788999999887665543322 367899999999955555444554        


Q ss_pred             ccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        549 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       549 ~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                            |.+|+............+...+.+|+++++|+++++...++.|++|++...+.
T Consensus       215 ------v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~  267 (270)
T 1rwi_B          215 ------VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH  267 (270)
T ss_dssp             ------EEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred             ------EEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence                  67777765443332233446789999999999888888899999999876543

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.35  E-value=2.8e-10  Score=128.17  Aligned_cols=153  Identities=8%  Similarity=-0.001  Sum_probs=106.4

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT  489 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~  489 (894)
                      ....+|+|+++|+++++...++.|++||+..++....+....                          ... ++|+++++
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~--------------------------~~~-ia~~~~g~  183 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK--------------------------GGK-PAVTKDKQ  183 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC--------------------------BCB-CEECTTSS
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC--------------------------CCc-eeEecCCC
Confidence            468899999999988887778999999999887665554422                          233 77888888


Q ss_pred             EEEEEECCC--CEEEEEcCCCcEEEEE----e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        490 MFITASKDH--TAKLFTTHDRQLLKTY----T-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       490 ~L~sgs~Dg--~V~iwdl~~~~~~~~~----~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      +|+++..++  .|.+|+...+.....+    . ....+.+++++|++..|+++..++.              |++||...
T Consensus       184 ~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~--------------I~~~d~~~  249 (409)
T 3hrp_A          184 RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKN--------------FGRFNVKT  249 (409)
T ss_dssp             EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCE--------------EEEEETTT
T ss_pred             cEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCc--------------EEEEECCC
Confidence            888887765  7888888766655444    2 3466889999997667777655443              67777765


Q ss_pred             cceEEE----ccCCCCCe-E-EEEEecC-CCEEEEEeCCCcEEEEECC
Q psy10063        563 EEEFAR----IKGHFGPI-N-SLAFHPD-GKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       563 ~~~~~~----l~~h~~~V-~-~l~~spd-g~~l~sgs~Dg~I~vwdl~  603 (894)
                      +.....    ..++...- . .|+|+|+ +.++++....+.|++|+.+
T Consensus       250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~  297 (409)
T 3hrp_A          250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD  297 (409)
T ss_dssp             CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred             CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence            543322    22333322 3 9999995 5555555567778888764

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.34  E-value=2.6e-10  Score=125.43  Aligned_cols=157  Identities=6%  Similarity=-0.069  Sum_probs=95.9

Q ss_pred             EEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        414 SLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       414 ~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .|+++|||++|+.+.          .++.|.+||..+++.+..+....+..+.                  ....-..++
T Consensus        82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~------------------~g~~P~~~a  143 (386)
T 3sjl_D           82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL------------------VGTYPWMTS  143 (386)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC------------------BSCCGGGEE
T ss_pred             cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc------------------cCCCCceEE
Confidence            399999999888775          3578999999999998887532100000                  000355688


Q ss_pred             EecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        484 FSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       484 ~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      |+|||++|+++..  ++.|.|+|+.+++.+..+...+.  ...+....+.++..+.+|.+.+              .++.
T Consensus       144 ~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~--------------v~~~  207 (386)
T 3sjl_D          144 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAK--------------VAFG  207 (386)
T ss_dssp             ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEE--------------EECC
T ss_pred             EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEE--------------EECC
Confidence            8899998888764  68899999999999999875432  2223333445556666665322              2222


Q ss_pred             c-cceEEE----ccCCCCCeE-EEEEe-cCCCEEEEEeCCCcEEEEECCCC
Q psy10063        562 F-EEEFAR----IKGHFGPIN-SLAFH-PDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       562 ~-~~~~~~----l~~h~~~V~-~l~~s-pdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      . ++.+..    +......+. ...|. ++|++++ .+.+|.|++.|+...
T Consensus       208 ~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~  257 (386)
T 3sjl_D          208 TEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSG  257 (386)
T ss_dssp             SSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred             CCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCC
Confidence            2 221111    111111221 24664 5675444 566788999888654

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.33  E-value=1.3e-10  Score=127.87  Aligned_cols=80  Identities=6%  Similarity=-0.027  Sum_probs=63.6

Q ss_pred             ceEeecCCCeEEEEec-C-C-----CCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc-EEEEec-CCCcEEEEec
Q psy10063        804 DFLFDFDTTREVTTTS-T-K-----VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGG-EDGFVRLHTF  874 (894)
Q Consensus       804 ~~~fS~dg~~l~~as~-d-~-----~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~-~LaS~s-~Dg~V~vWdl  874 (894)
                      .++|++|+++++++.. . +     .+  .+.|||+++++.++.+..+. ...+|+|++||+ ++++.. .++.|.|||+
T Consensus       268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~--~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~  344 (368)
T 1mda_H          268 MVAKLKNTDGIMILTVEHSRSCLAAAE--NTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDA  344 (368)
T ss_dssp             CEEEETTTTEEEEEEEECSSCTTSCEE--EEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred             eeEEcCCCCEEEEEeccccCcccccCC--CEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence            3789999999988754 2 1     11  36699999999999887554 578999999997 566666 5999999999


Q ss_pred             CccccccccccC
Q psy10063        875 DQAYFDYTFDIS  886 (894)
Q Consensus       875 ~~~~~~~~~~~~  886 (894)
                      .+.+.+..+...
T Consensus       345 ~t~kvv~~I~vg  356 (368)
T 1mda_H          345 ASDQDQSSVELD  356 (368)
T ss_dssp             SSCEEEEECCCC
T ss_pred             CCCcEEEEEECC
Confidence            999998887654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.30  E-value=1.1e-10  Score=141.15  Aligned_cols=172  Identities=12%  Similarity=0.116  Sum_probs=100.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEe-----cCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        407 DQSAKITSLLWGNLDQYIITG-----HAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sg-----s~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      +|...|.+++|||||++||.+     +.+..|+|||+.+|+.+.. +...   ....++|+ ||+.|+++..+..-    
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~---k~~~~~Ws-Dg~~l~y~~~~~~~----  197 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV---KFSGISWL-GNEGFFYSSYDKPD----  197 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE---ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc---eeccEEEe-CCCEEEEEEecCcc----
Confidence            466679999999999988853     3335799999999986543 2211   11344555 55555554443210    


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeCC----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQL--LKTYTTE----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~~----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                             +..+-.......|++|++.+++.  ...+...    ..+.++.|+|||++|++....+..          .-+
T Consensus       198 -------~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~----------~~~  260 (693)
T 3iuj_A          198 -------GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTS----------GNR  260 (693)
T ss_dssp             --------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSS----------CCE
T ss_pred             -------cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCC----------CcE
Confidence                   00011111234599999987653  3333332    347889999999999876654321          013


Q ss_pred             EEEEeccccc-eEEEccCCCCCeEEEEEecCCCEEEEEe-CC---CcEEEEECCC
Q psy10063        555 ARFYHLIFEE-EFARIKGHFGPINSLAFHPDGKSYASGG-ED---GFLISNTLSN  604 (894)
Q Consensus       555 v~vwd~~~~~-~~~~l~~h~~~V~~l~~spdg~~l~sgs-~D---g~I~vwdl~~  604 (894)
                      |+++|+..+. .+..+..+...+... |+++|+.|+..+ .+   +.|.+|+++.
T Consensus       261 i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~  314 (693)
T 3iuj_A          261 LYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN  314 (693)
T ss_dssp             EEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred             EEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            7888887663 445555666666555 566666555443 32   3455555543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.28  E-value=8.4e-09  Score=109.78  Aligned_cols=211  Identities=8%  Similarity=-0.024  Sum_probs=143.2

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE-EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL-ESISGHAKEPINDMQFSKDATMFITASHSQAV---------  476 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~-~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------  476 (894)
                      .+...+.+|+++++|+++++...++.|.+||.. ++.. ..+..... .+.+|++.++|+++++...++.+         
T Consensus        54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~  131 (299)
T 2z2n_A           54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDS-APYGITEGPNGDIWFTEMNGNRIGRITDDGKI  131 (299)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTTSCEEEEETTTTEEEEECTTCCE
T ss_pred             cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCC-CceeeEECCCCCEEEEecCCceEEEECCCCCE
Confidence            356789999999999988887778899999986 4432 22222333 78999999999877765443322         


Q ss_pred             ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-e-CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY-T-TERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                               ..+.+|++.++|.++++...++.|.+||. +++..... . ....+.+++++++|..+++....+.     
T Consensus       132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-----  205 (299)
T 2z2n_A          132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-----  205 (299)
T ss_dssp             EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-----
T ss_pred             EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-----
Confidence                     35788999999988777767789999999 67665432 2 2356889999999885555444444     


Q ss_pred             ccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-----cCCCceeeeEE
Q psy10063        546 TSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-----SEGSFTSSSTQ  619 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-----~~~~~v~~~~~  619 (894)
                               |.+||. .++... .+..+...+.+|+++++|+++++...++.|.+|+.. ++..     .....+..+++
T Consensus       206 ---------i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~  274 (299)
T 2z2n_A          206 ---------IGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF  274 (299)
T ss_dssp             ---------EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE
T ss_pred             ---------EEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe
Confidence                     667776 454332 234455678999999999876666577899999984 3211     11234556666


Q ss_pred             CcCCcEEEe-cCCeEEEEe
Q psy10063        620 QPDGLVYPS-QGGHIHSLS  637 (894)
Q Consensus       620 spdg~~l~~-~~g~i~~~~  637 (894)
                       ++|.++.. ..+.+..+.
T Consensus       275 -~~g~l~v~~~~~~l~~~~  292 (299)
T 2z2n_A          275 -DGETIWFAMECDKIGKLT  292 (299)
T ss_dssp             -CSSCEEEEETTTEEEEEE
T ss_pred             -cCCCEEEEecCCcEEEEE
Confidence             66666544 244444443

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.28  E-value=6.9e-10  Score=119.51  Aligned_cols=216  Identities=16%  Similarity=0.218  Sum_probs=147.0

Q ss_pred             ecCCCCEEEEEEccCCCEEEE-------ecCCCcEEEEecCCCeEEEEec----CCCCCCeeEEEEcCC-CCEEEEEeCC
Q psy10063        406 TDQSAKITSLLWGNLDQYIIT-------GHAKGDICTWDLRMGRELESIS----GHAKEPINDMQFSKD-ATMFITASHS  473 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~s-------gs~Dg~I~iWd~~tg~~~~~l~----~h~~~~V~~v~~spd-g~~la~~~~d  473 (894)
                      .+.-....+++|+++|+++++       +..++.|.+||..+++......    ++.. .+.+++++++ |+++++...+
T Consensus        14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~-~~~~i~~~~~~g~l~v~~~~~   92 (314)
T 1pjx_A           14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGG-IPAGCQCDRDANQLFVADMRL   92 (314)
T ss_dssp             ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEEC-CEEEEEECSSSSEEEEEETTT
T ss_pred             hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCC-CCceEEEecCCCcEEEEECCC
Confidence            344556789999999988877       5678899999988887643322    1334 7899999999 7655544322


Q ss_pred             --------CCc-------------cceEEEEEecCCCEEEEEECC---------------CCEEEEEcCCCcEEEEEeCC
Q psy10063        474 --------QAV-------------EPINDMQFSKDATMFITASKD---------------HTAKLFTTHDRQLLKTYTTE  517 (894)
Q Consensus       474 --------~~i-------------~~V~~l~~spdg~~L~sgs~D---------------g~V~iwdl~~~~~~~~~~~~  517 (894)
                              +.+             ..+.+|+++++|+++++...+               +.|..||.. ++....+.+.
T Consensus        93 ~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~  171 (314)
T 1pjx_A           93 GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF  171 (314)
T ss_dssp             EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred             CEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence                    111             136789999999887776554               467777765 6655554444


Q ss_pred             CCeeEEEEc----CCCCEEEEEEC-CCCeEEEeccCccceeeEEEEecc-ccc-----eEEEccCCC-CCeEEEEEecCC
Q psy10063        518 RPVNSAALS----PILPHVVLGGG-QEAREVTTTSTKVGKFDARFYHLI-FEE-----EFARIKGHF-GPINSLAFHPDG  585 (894)
Q Consensus       518 ~~v~~l~~s----pdg~~l~~~~~-~~~~~v~~~~~~~~~~~v~vwd~~-~~~-----~~~~l~~h~-~~V~~l~~spdg  585 (894)
                      .....++|+    ++|+.|+++.. ++.              |.+|++. .++     .+..+.++. ..+..|+++++|
T Consensus       172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~--------------i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G  237 (314)
T 1pjx_A          172 QFPNGIAVRHMNDGRPYQLIVAETPTKK--------------LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN  237 (314)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEEETTTTE--------------EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred             CCcceEEEecccCCCCCEEEEEECCCCe--------------EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence            567899999    99988877764 344              5666654 232     233344454 668899999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEECcCCc-EEEecCC--eEEEEe
Q psy10063        586 KSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGL-VYPSQGG--HIHSLS  637 (894)
Q Consensus       586 ~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~-~l~~~~g--~i~~~~  637 (894)
                      +++++...++.|.+|+.++++.+.    ....+..++++++|. +++...+  .+..+.
T Consensus       238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~  296 (314)
T 1pjx_A          238 NLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE  296 (314)
T ss_dssp             CEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence            988888788999999988554321    235677888888887 4443333  555554

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.27  E-value=2.1e-09  Score=115.33  Aligned_cols=168  Identities=10%  Similarity=0.133  Sum_probs=103.0

Q ss_pred             EEEEecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ...+..+..-.-+..|+++++ ++++...++.|++||..+++. ..+.. ..                         .+.
T Consensus         5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~-------------------------~~~   57 (297)
T 3g4e_A            5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-DA-------------------------PVS   57 (297)
T ss_dssp             EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-SS-------------------------CEE
T ss_pred             EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-CC-------------------------ceE
Confidence            334555666778999999654 566666788999999987764 33322 22                         577


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      +++|+++|+++++ . ++.|.+||.++++........     ..+..++++++|++++.........   .......  .
T Consensus        58 ~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~---~~~~~~~--~  130 (297)
T 3g4e_A           58 SVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP---AVLERHQ--G  130 (297)
T ss_dssp             EEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT---TBCCTTC--E
T ss_pred             EEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc---ccccCCC--c
Confidence            7888888885444 3 567999999888765544431     3478899999999665443322100   0000000  2


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS  603 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~  603 (894)
                      ++|.+.....+..+..+......++|+||++.|+.+ +.++.|.+|+++
T Consensus       131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d  179 (297)
T 3g4e_A          131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD  179 (297)
T ss_dssp             EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred             EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence            333332222222233344456889999999876544 456788888863

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.24  E-value=1.7e-09  Score=121.00  Aligned_cols=155  Identities=8%  Similarity=-0.059  Sum_probs=93.6

Q ss_pred             EEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        414 SLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGH-AKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       414 ~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      .++|+|||++|+.+.          .++.|.++|..+++.++.+... .. ...                  .......+
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~-r~~------------------~g~~P~~~  182 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP-RFL------------------VGTYQWMN  182 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC-CCC------------------BSCCGGGS
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc-ccc------------------cCCCcceE
Confidence            899999999888875          3678999999999998887532 11 000                  00024567


Q ss_pred             EEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        483 QFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       483 ~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +|+|||++|+++..  ++.|.+.|+.+++.+..+...+.   ....|+| +.++..+.++.+              .+.+
T Consensus       183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~--------------~~V~  245 (426)
T 3c75_H          183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSL--------------ARVD  245 (426)
T ss_dssp             EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSE--------------EEEE
T ss_pred             EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCE--------------EEEE
Confidence            88888888888764  57899999999999988876432   2222222 333334444432              1122


Q ss_pred             ccccceEE----EccCCCCC-eEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        560 LIFEEEFA----RIKGHFGP-INSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       560 ~~~~~~~~----~l~~h~~~-V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +..++...    .+.....+ ...+.|.++++.++.....+.|.+.|+..
T Consensus       246 ~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~  295 (426)
T 3c75_H          246 FADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA  295 (426)
T ss_dssp             CCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS
T ss_pred             CCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC
Confidence            22222111    11111111 12346778877777667777788777643

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.22  E-value=6e-09  Score=115.73  Aligned_cols=154  Identities=13%  Similarity=0.084  Sum_probs=96.0

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT  499 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~  499 (894)
                      ++..|+.++.++.|+.||.++|+.+..+........    ....+            ..+.+. ...++..|+.++.++.
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~----~~~~~------------~~~~~~-~~~~~~~v~v~~~~g~  114 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGW----FSKEP------------ALLSGG-VTVSGGHVYIGSEKAQ  114 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---C----CSCCC------------CCEEEE-EEEETTEEEEEETTSE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCcccccc----ccccC------------cccccC-ceEeCCEEEEEcCCCE
Confidence            366888888899999999999998876664321000    00000            012111 1123567888889999


Q ss_pred             EEEEEcCCCcEEEEEeCCCCee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe--
Q psy10063        500 AKLFTTHDRQLLKTYTTERPVN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI--  576 (894)
Q Consensus       500 V~iwdl~~~~~~~~~~~~~~v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V--  576 (894)
                      |..+|.++|+++..+.....+. ...+.  +..|++++.++.              |..+|.++|+.+..+.......  
T Consensus       115 l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~--------------l~~~d~~tG~~~W~~~~~~~~~~~  178 (376)
T 3q7m_A          115 VYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQ--------------LQALNEADGAVKWTVNLDMPSLSL  178 (376)
T ss_dssp             EEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSE--------------EEEEETTTCCEEEEEECCC-----
T ss_pred             EEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCe--------------EEEEECCCCcEEEEEeCCCCceee
Confidence            9999999999988777644332 22222  457777777765              6777777777666554322111  


Q ss_pred             ---EEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        577 ---NSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       577 ---~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                         ......  +..|+.+..++.|..+|.++++.+
T Consensus       179 ~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~  211 (376)
T 3q7m_A          179 RGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMI  211 (376)
T ss_dssp             CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEE
T ss_pred             cCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEE
Confidence               122222  446777888999999999877644

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.22  E-value=1.2e-09  Score=130.96  Aligned_cols=66  Identities=11%  Similarity=0.060  Sum_probs=54.6

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQ  892 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~q  892 (894)
                      .|+.||+.+|+.+-.+. |..++....++.++.+|+.++.||.|++||+++++.+..+.++..+...
T Consensus       458 ~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~  523 (677)
T 1kb0_A          458 RLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA  523 (677)
T ss_dssp             EEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred             EEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence            59999999999887765 3345666778888999999999999999999999999999877655443

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.22  E-value=3.7e-10  Score=124.65  Aligned_cols=165  Identities=7%  Similarity=0.040  Sum_probs=124.2

Q ss_pred             CCccceeeeeccCccEEEecCCCeEEE--------------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEPVVKM--------------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTW  436 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~--------------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iW  436 (894)
                      +.....++++++.+++++.++...+++                    ....+.+ |.+|+|  |+++|+++ .++.|++|
T Consensus        36 ~~~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~  111 (388)
T 1xip_A           36 PFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL  111 (388)
T ss_dssp             CSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred             CcccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence            444567778888888888776554432                    2334667 999999  99999999 88999999


Q ss_pred             ecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC
Q psy10063        437 DLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT  516 (894)
Q Consensus       437 d~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~  516 (894)
                      |+.+......+..|..                         .|.++.+.+.  .|+++..||.|.+||++.++...   +
T Consensus       112 dv~sl~~~~~~~~~~~-------------------------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~  161 (388)
T 1xip_A          112 DLEELSEFRTVTSFEK-------------------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---L  161 (388)
T ss_dssp             ESSSTTCEEEEEECSS-------------------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---E
T ss_pred             EchhhhccCccceeec-------------------------ceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---c
Confidence            9987765555666655                         3445555443  28888999999999999888754   3


Q ss_pred             CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEEc------c---CCCCCeEEEEEecCC
Q psy10063        517 ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FARI------K---GHFGPINSLAFHPDG  585 (894)
Q Consensus       517 ~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~l------~---~h~~~V~~l~~spdg  585 (894)
                      ...|.|++|||+|  ++++..++.              +++|+...++.  .+.+      .   +|...|.+|.|.+++
T Consensus       162 ~~~Vs~v~WSpkG--~~vg~~dg~--------------i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~  225 (388)
T 1xip_A          162 AQNVTSFDVTNSQ--LAVLLKDRS--------------FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ  225 (388)
T ss_dssp             EESEEEEEECSSE--EEEEETTSC--------------EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred             cCCceEEEEcCCc--eEEEEcCCc--------------EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence            4589999999999  788888887              67776665554  4444      2   478899999999999


Q ss_pred             CEEEEE
Q psy10063        586 KSYASG  591 (894)
Q Consensus       586 ~~l~sg  591 (894)
                      .+|++-
T Consensus       226 ~flv~y  231 (388)
T 1xip_A          226 DFLAVF  231 (388)
T ss_dssp             EEEEEE
T ss_pred             eEEEEE
Confidence            888753

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.19  E-value=1.8e-08  Score=109.62  Aligned_cols=156  Identities=15%  Similarity=0.037  Sum_probs=99.0

Q ss_pred             CCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        408 QSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       408 H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      ......+++|+|+++ ++++...++.|.+||..+++.. .+.. ..                         .+.+++|++
T Consensus        47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~-------------------------~v~~i~~~~   99 (326)
T 2ghs_A           47 PMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PF-------------------------MGSALAKIS   99 (326)
T ss_dssp             CCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SS-------------------------CEEEEEEEE
T ss_pred             CCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-CC-------------------------cceEEEEeC
Confidence            344567889999855 5566667889999999877643 2321 22                         477788888


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTTE-----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      +|+++++. .+ .|.+||.++++........     ..+.+++++++|++++.......        ......|..++  
T Consensus       100 dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~--------~~~~~~l~~~~--  167 (326)
T 2ghs_A          100 DSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA--------ETGAGSIYHVA--  167 (326)
T ss_dssp             TTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC--------CTTCEEEEEEE--
T ss_pred             CCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC--------CCCceEEEEEe--
Confidence            88766654 44 4999999888865544321     35789999999986654432210        00000133444  


Q ss_pred             ccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECC
Q psy10063        562 FEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLS  603 (894)
Q Consensus       562 ~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~  603 (894)
                      .++.. .+..+......++|++||++|+.+. .++.|.+|+++
T Consensus       168 ~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~  209 (326)
T 2ghs_A          168 KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD  209 (326)
T ss_dssp             TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence            33332 2323334567899999998776554 56788888874

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.19  E-value=2.5e-09  Score=115.16  Aligned_cols=100  Identities=10%  Similarity=-0.022  Sum_probs=69.2

Q ss_pred             eEEEeeCCCCCEEEEecCC------CcEEEEEccCCce-----eecc-ccCCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063        763 GFKMPEPPKREKLALALAD------KVSERYRDRKNKA-----TAGF-LLSCPDFLFDFDTTREVTTTSTKVGKFDARFY  830 (894)
Q Consensus       763 v~~la~spdg~~Latgs~D------g~I~iwd~~~~~~-----~~~~-~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vw  830 (894)
                      ...++|+||++.|+++...      +.|++|++.....     +... ......+++.++|. |+++..+     .|++|
T Consensus       190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-----gv~~~  263 (305)
T 3dr2_A          190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-----GVCVF  263 (305)
T ss_dssp             EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-----EEEEE
T ss_pred             CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-----cEEEE
Confidence            4568889999887776655      6799998765431     1111 12234678899998 4444433     39999


Q ss_pred             ecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        831 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       831 d~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      +. .|+.+..+..+. .+.+++|+++++.|+.++.++..+
T Consensus       264 ~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~  301 (305)
T 3dr2_A          264 DS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM  301 (305)
T ss_dssp             CT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred             CC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence            98 477777777665 588999999998888877765333

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.18  E-value=7.6e-09  Score=124.07  Aligned_cols=203  Identities=10%  Similarity=-0.002  Sum_probs=122.5

Q ss_pred             cceeeeeccCccEEEecC-CCeEEEEEecCCC-----------CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe
Q psy10063        380 VDRLNSMSPAARKLATNA-EPVVKMQVTDQSA-----------KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI  447 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~-~~~~~~~l~~H~~-----------~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l  447 (894)
                      ..++...+.++++.+... .+.++..+.....           ....+++  ++.+|+.++.|+.|+.+|..+|+.+..+
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            344555566666665543 3344443332211           0122333  4678899999999999999999998888


Q ss_pred             cCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE------CCCCEEEEEcCCCcEEEEEeCCCC-
Q psy10063        448 SGH-AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS------KDHTAKLFTTHDRQLLKTYTTERP-  519 (894)
Q Consensus       448 ~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs------~Dg~V~iwdl~~~~~~~~~~~~~~-  519 (894)
                      ..+ ......                     .+.+.-...+ ..|+.++      .++.|+.||.++|+++..+..... 
T Consensus       155 ~~~~~~~~~~---------------------~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~  212 (677)
T 1kb0_A          155 NTFEGQKGSL---------------------TITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGD  212 (677)
T ss_dssp             ETTTTCCSSC---------------------BCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred             cCCcCcCcCc---------------------ccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCC
Confidence            755 210000                     0100000012 3444443      278999999999999988764211 


Q ss_pred             --------------------------------eeEEEEcCCCCEEEEEECCCCeEEEeccCcc-------ceeeEEEEec
Q psy10063        520 --------------------------------VNSAALSPILPHVVLGGGQEAREVTTTSTKV-------GKFDARFYHL  560 (894)
Q Consensus       520 --------------------------------v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~-------~~~~v~vwd~  560 (894)
                                                      ...+++++++.+|+++..++..  |......       ..-.|..+|.
T Consensus       213 ~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~--w~~~~~~~~~gd~~~~~sv~AlD~  290 (677)
T 1kb0_A          213 PSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSP--WSHKVRSPKGGDNLYLASIVALDP  290 (677)
T ss_dssp             TTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHSTTCCCCTTTTEEEEECT
T ss_pred             ccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcc--ccCCCCCccCCCCeeeEEEEEEEC
Confidence                                            1357889999999988776532  2211100       0013888899


Q ss_pred             cccceEEEccC--CC-------CCeEEEEEecCC---CEEEEEeCCCcEEEEECCCCccc
Q psy10063        561 IFEEEFARIKG--HF-------GPINSLAFHPDG---KSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       561 ~~~~~~~~l~~--h~-------~~V~~l~~spdg---~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      .+|+.+-.+..  |.       .....+....+|   +.|+.++.+|.|+++|.++++.+
T Consensus       291 ~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l  350 (677)
T 1kb0_A          291 DTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI  350 (677)
T ss_dssp             TTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred             CCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence            99988766543  32       122233344477   67899999999999999888754

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.18  E-value=2e-09  Score=129.42  Aligned_cols=67  Identities=12%  Similarity=0.025  Sum_probs=55.1

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|+.||+.+|+.+-.+..|. ++....++..+.+|+.++.||.|++||.++++.+.+++++..+...|
T Consensus       456 ~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p  522 (689)
T 1yiq_A          456 KLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAP  522 (689)
T ss_dssp             EEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCc
Confidence            59999999999987776554 34445777788899999999999999999999999998876665444

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.17  E-value=4.8e-08  Score=103.87  Aligned_cols=205  Identities=11%  Similarity=0.030  Sum_probs=138.9

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAV---------  476 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------  476 (894)
                      .+...+.+|++.++|+++++...++.|.+||.. ++.... +..... .+.++++.++|+++++...++.+         
T Consensus        59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~  136 (300)
T 2qc5_A           59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDS-GPYGITEGLNGDIWFTQLNGDRIGKLTADGTI  136 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECSTTCEEEEETTTTEEEEECTTSCE
T ss_pred             CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCC-CCccceECCCCCEEEEccCCCeEEEECCCCCE
Confidence            345789999999999988877777889999988 665322 222333 78999999999877765433322         


Q ss_pred             ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                               ..+.+|++.++|+++++...++.|.+||. +++......  ....+.++++.++|..+++....+.     
T Consensus       137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-----  210 (300)
T 2qc5_A          137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-----  210 (300)
T ss_dssp             EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-----
T ss_pred             EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-----
Confidence                     35678889999997766666788999998 666554221  2356889999999875554444443     


Q ss_pred             ccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc---cc-CCCceeeeEEC
Q psy10063        546 TSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD---IS-EGSFTSSSTQQ  620 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~---~~-~~~~v~~~~~s  620 (894)
                               |.+|+. .++... .+..+...+.+|+++++|+++++...++.|.+|+......   +. ....+..+++.
T Consensus       211 ---------i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~  280 (300)
T 2qc5_A          211 ---------IGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFG  280 (300)
T ss_dssp             ---------EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEEC
T ss_pred             ---------EEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeC
Confidence                     666666 343332 2334556789999999998766666678999999843211   11 12345667777


Q ss_pred             cCCcEEEec
Q psy10063        621 PDGLVYPSQ  629 (894)
Q Consensus       621 pdg~~l~~~  629 (894)
                      ++|.++...
T Consensus       281 ~~g~l~v~~  289 (300)
T 2qc5_A          281 KDGSVWFAL  289 (300)
T ss_dssp             TTSCEEEEC
T ss_pred             CCCCEEEEc
Confidence            777665443

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.14  E-value=4.3e-09  Score=113.34  Aligned_cols=218  Identities=13%  Similarity=0.115  Sum_probs=136.9

Q ss_pred             EecCCCCEEEEEEccCCC-EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063        405 VTDQSAKITSLLWGNLDQ-YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------  476 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~-~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------  476 (894)
                      +..+.....+++|+++|+ +++++..++.|.+|+. .++ +..+..+.. .+..++|+++|+++++....+.+       
T Consensus        40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~-~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g  116 (305)
T 3dr2_A           40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATA-FTNGNAVDAQQRLVHCEHGRRAITRSDADG  116 (305)
T ss_dssp             EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCS-CEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred             EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCC-ccceeeECCCCCEEEEECCCCEEEEECCCC
Confidence            344566778999999998 6677777889999998 455 344544555 78999999999966654332222       


Q ss_pred             --------------cceEEEEEecCCCEEEE----EEC-------------CCCEEEEEcCCCcEEEEEeCCCCeeEEEE
Q psy10063        477 --------------EPINDMQFSKDATMFIT----ASK-------------DHTAKLFTTHDRQLLKTYTTERPVNSAAL  525 (894)
Q Consensus       477 --------------~~V~~l~~spdg~~L~s----gs~-------------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~  525 (894)
                                    ..+.+++++++|+++++    |..             .+.|..||..+++..... .......++|
T Consensus       117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~  195 (305)
T 3dr2_A          117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAF  195 (305)
T ss_dssp             CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEE
T ss_pred             CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEE
Confidence                          13456899999998876    322             245777777777765544 4456788999


Q ss_pred             cCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce--EEEc-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        526 SPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE--FARI-KGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       526 spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~--~~~l-~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      +|||+.|+++......        .+...|++|++..+..  ...+ ....+....|+++++|++.++ ..+ .|.+|+.
T Consensus       196 spdg~~lyv~~~~~~~--------~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~  265 (305)
T 3dr2_A          196 SPDEQTLYVSQTPEQG--------HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS  265 (305)
T ss_dssp             CTTSSEEEEEECCC-----------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT
T ss_pred             cCCCCEEEEEecCCcC--------CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC
Confidence            9999998888765200        0000156666654321  0111 112344567899999995444 444 4999998


Q ss_pred             CCCcc--ccCCCceeeeEECcCCcEE-EecCCeEEEE
Q psy10063        603 SNGLD--ISEGSFTSSSTQQPDGLVY-PSQGGHIHSL  636 (894)
Q Consensus       603 ~~~~~--~~~~~~v~~~~~spdg~~l-~~~~g~i~~~  636 (894)
                      +....  +.....+..++|.+++..+ .+..+.+..+
T Consensus       266 ~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          266 DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred             CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence            54321  1223346677888777544 3444444443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.09  E-value=1.2e-09  Score=124.73  Aligned_cols=335  Identities=9%  Similarity=0.009  Sum_probs=195.0

Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe----------CCC--Cc--cceEEEEEec--
Q psy10063        423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS----------HSQ--AV--EPINDMQFSK--  486 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~----------~d~--~i--~~V~~l~~sp--  486 (894)
                      .+.||+..|.|+|+-+.+++.++.+..-...+-..--|..+.+.++..+          ..|  .+  +......+|.  
T Consensus        17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~   96 (595)
T 1fwx_A           17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE   96 (595)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred             EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence            3567888999999999999998887532110000000000001111000          001  01  1222244444  


Q ss_pred             ---CCCEEEEEECC-CCEEEEEcCCCcEEEEEeC--CCCeeEEEE-c-CCCCEEEEEECCCC------eEEEeccCccce
Q psy10063        487 ---DATMFITASKD-HTAKLFTTHDRQLLKTYTT--ERPVNSAAL-S-PILPHVVLGGGQEA------REVTTTSTKVGK  552 (894)
Q Consensus       487 ---dg~~L~sgs~D-g~V~iwdl~~~~~~~~~~~--~~~v~~l~~-s-pdg~~l~~~~~~~~------~~v~~~~~~~~~  552 (894)
                         ||++|+.+..+ ..|.+.|++..++.+.+..  ...+..+++ + |+++++++++....      ..+..  .....
T Consensus        97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~--~~~~~  174 (595)
T 1fwx_A           97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED--VANYV  174 (595)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC--GGGEE
T ss_pred             CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc--ccccC
Confidence               88888887664 5699999999999986654  467889998 5 99999999874321      11111  11122


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC---------------cEEEEECCCCccccCCCceeee
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG---------------FLISNTLSNGLDISEGSFTSSS  617 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg---------------~I~vwdl~~~~~~~~~~~v~~~  617 (894)
                      -.+.++|.++.+.+..+.--. ....+++++||+++++.+.+.               .|.+++....+.          
T Consensus       175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~----------  243 (595)
T 1fwx_A          175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK----------  243 (595)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH----------
T ss_pred             ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE----------
Confidence            248899999988887765322 456788999999999988653               255555432221          


Q ss_pred             EECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEe
Q psy10063        618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVEL  697 (894)
Q Consensus       618 ~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  697 (894)
                       +.++|+....  +.+..++....                                      .+                
T Consensus       244 -~v~~Gk~~~i--~~V~VID~~~~--------------------------------------~~----------------  266 (595)
T 1fwx_A          244 -AIAAGDYQEL--NGVKVVDGRKE--------------------------------------AS----------------  266 (595)
T ss_dssp             -HHHHTCSEEE--TTEEEEECSGG--------------------------------------GC----------------
T ss_pred             -eccCCCeeEE--CcEEEEeCccc--------------------------------------CC----------------
Confidence             2233332211  11222221000                                      00                


Q ss_pred             ccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEE
Q psy10063        698 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLAL  777 (894)
Q Consensus       698 s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Lat  777 (894)
                          ...              +                                  ..+. -.....++.++|||+++++
T Consensus       267 ----~~~--------------~----------------------------------~~Ip-vg~~PhGv~~sPDGk~v~V  293 (595)
T 1fwx_A          267 ----SLF--------------T----------------------------------RYIP-IANNPHGCNMAPDKKHLCV  293 (595)
T ss_dssp             ----CSS--------------E----------------------------------EEEE-EESSCCCEEECTTSSEEEE
T ss_pred             ----cee--------------E----------------------------------EEEe-cCCCceEEEEcCCCCEEEE
Confidence                000              0                                  0000 0012347889999998776


Q ss_pred             e-cCCCcEEEEEccCCc------------eeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCC--------
Q psy10063        778 A-LADKVSERYRDRKNK------------ATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIF--------  834 (894)
Q Consensus       778 g-s~Dg~I~iwd~~~~~------------~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~t--------  834 (894)
                      + ..+..|.++|+.+.+            .......  +...++|+++| ++++...-..   +|.+|+++.        
T Consensus       294 ~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~lds---qV~kwdi~~a~~~~~g~  369 (595)
T 1fwx_A          294 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDS---QVVKWNIEDAIRAYAGE  369 (595)
T ss_dssp             ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTT---EEEEEEHHHHHHHHHTC
T ss_pred             eCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCC---cEEEEEhhHhhhhhccc
Confidence            5 467889999998663            2333332  33467899999 6666555433   699999987        


Q ss_pred             --cceeeeccCCCCCe-----eEEEEeeCCcEEEEe---cCCCcE----------EEEecCccccccccc
Q psy10063        835 --EEEFARIKGHFGPI-----NSLAFHPDGKSYASG---GEDGFV----------RLHTFDQAYFDYTFD  884 (894)
Q Consensus       835 --g~~l~~l~gH~~~V-----~~l~fSpdg~~LaS~---s~Dg~V----------~vWdl~~~~~~~~~~  884 (894)
                        .+.+.++..|..+-     .++.+++||+||+++   +.|+.+          .|+|+.++++....+
T Consensus       370 ~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d  439 (595)
T 1fwx_A          370 KVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHD  439 (595)
T ss_dssp             SCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEE
T ss_pred             ccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEE
Confidence              45667777665432     223558999999985   456643          889997776554433

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.07  E-value=1.3e-09  Score=120.28  Aligned_cols=175  Identities=13%  Similarity=0.045  Sum_probs=124.2

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCE
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATM  490 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~  490 (894)
                      .+..|++++...+|++|+.+ .++||+++..+...  ..... .     |.+  ..++  .    +..|..|+|  |+.+
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~--~~~~~-~-----~~~--~~~~--~----lp~V~~l~f--d~~~   99 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHI--TSDST-P-----LTF--KWEK--E----IPDVIFVCF--HGDQ   99 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHH--HSSSC-C-----CCC--SEEE--E----CTTEEEEEE--ETTE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhh--ccccc-c-----ccc--eEEe--e----CCCeeEEEE--CCCE
Confidence            69999999999999999988 46679976443100  00000 0     000  0000  0    013888999  8899


Q ss_pred             EEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc
Q psy10063        491 FITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI  569 (894)
Q Consensus       491 L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l  569 (894)
                      |+++ .++.|++||+++......+. +...+.++.+.+.  .++++..+|.              |.+||+..++...  
T Consensus       100 L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~--------------L~v~dl~~~~~~~--  160 (388)
T 1xip_A          100 VLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVND--------------LSALDLRTKSTKQ--  160 (388)
T ss_dssp             EEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSE--------------EEEEETTTCCEEE--
T ss_pred             EEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCC--------------EEEEEccCCcccc--
Confidence            9998 88999999998766544443 4567888777654  3888888886              8899998777653  


Q ss_pred             cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-----c------c----CCCceeeeEECcCCcEEE
Q psy10063        570 KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-----I------S----EGSFTSSSTQQPDGLVYP  627 (894)
Q Consensus       570 ~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-----~------~----~~~~v~~~~~spdg~~l~  627 (894)
                        +...|.|++|+|+|  ++.|..||.|++|+.+..+.     +      .    +...+.++.|.+++.+++
T Consensus       161 --~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv  229 (388)
T 1xip_A          161 --LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA  229 (388)
T ss_dssp             --EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred             --ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence              45689999999999  77899999999998876652     1      1    346677888888877664

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.07  E-value=1.8e-09  Score=118.86  Aligned_cols=85  Identities=9%  Similarity=0.133  Sum_probs=64.2

Q ss_pred             EeeCCCCCEEEEecC---------CCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEEec--CCCCceeEEEeec
Q psy10063        766 MPEPPKREKLALALA---------DKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTTTS--TKVGKFDARFYHL  832 (894)
Q Consensus       766 la~spdg~~Latgs~---------Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~as~--d~~g~~~I~vwd~  832 (894)
                      ++++||+++|+++..         ++.+.++|..+.+.+..+..+  ...++|++||++++++..  ++    .|.|+|+
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~----~VsVID~  344 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTE----VLDIYDA  344 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTT----EEEEEES
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCC----eEEEEEC
Confidence            568899888876533         235669999999988877654  567889999997766665  33    6999999


Q ss_pred             CCcceeeeccCCCCCeeEEEEee
Q psy10063        833 IFEEEFARIKGHFGPINSLAFHP  855 (894)
Q Consensus       833 ~tg~~l~~l~gH~~~V~~l~fSp  855 (894)
                      .+++.+..+..+..+ +.|+|.+
T Consensus       345 ~t~kvv~~I~vg~~P-~~i~~~~  366 (368)
T 1mda_H          345 ASDQDQSSVELDKGP-ESLSVQN  366 (368)
T ss_dssp             SSCEEEEECCCCSCC-CEEECCC
T ss_pred             CCCcEEEEEECCCCC-CEEEeec
Confidence            999999999866543 4666654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.05  E-value=4.8e-06  Score=102.03  Aligned_cols=385  Identities=8%  Similarity=-0.016  Sum_probs=201.0

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCC---CeeEEEEcCCCCEEEEEeCCCC---------c-
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKE---PINDMQFSKDATMFITASHSQA---------V-  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~---~V~~v~~spdg~~la~~~~d~~---------i-  476 (894)
                      ..|.+|...++|.+.+ |..+| |.+||..+++... +......   .|.+|...++|.+.+... .+-         + 
T Consensus        88 n~I~~i~~d~~g~lWi-gT~~G-l~~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~~~  163 (795)
T 4a2l_A           88 DISRIVKTDSQGRVWI-GTRDG-LSRYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP-EGLIMFDIKESKFI  163 (795)
T ss_dssp             SCEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET-TEEEEEETTTTEEE
T ss_pred             cceeEEEECCCCCEEE-EeCCc-hheeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC-CceEEEECCCCEEE
Confidence            5799999998886554 44454 8999988776433 3322110   288888888887655432 211         1 


Q ss_pred             --------cc-eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        477 --------EP-INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       477 --------~~-V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                              .. |.+|...++|.+.+ +..++.|..||.+.++......  ....|.++....+|. |.++...+.     
T Consensus       164 ~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~G-----  236 (795)
T 4a2l_A          164 DDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAG-----  236 (795)
T ss_dssp             CSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSC-----
T ss_pred             eccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCC-----
Confidence                    12 78888887776554 6665568999988776554321  245688888887775 444544333     


Q ss_pred             ccCccceeeEEEEeccccceEEEccC-------CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc---------
Q psy10063        546 TSTKVGKFDARFYHLIFEEEFARIKG-------HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS---------  609 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~~~l~~-------h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~---------  609 (894)
                               |.+||...++.......       ....|.+|...++|.+.+ |..+ -|.+|+...++...         
T Consensus       237 ---------l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~  305 (795)
T 4a2l_A          237 ---------LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENG  305 (795)
T ss_dssp             ---------EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTT
T ss_pred             ---------eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCC
Confidence                     66777665544332211       235699999988887554 4444 58888876553210         


Q ss_pred             --CCCceeeeEECcCCcEEE-ecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEe
Q psy10063        610 --EGSFTSSSTQQPDGLVYP-SQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHV  686 (894)
Q Consensus       610 --~~~~v~~~~~spdg~~l~-~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~  686 (894)
                        ....+.++...++|.+.. +.++.+..+.....                 .+....            ......    
T Consensus       306 ~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~-----------------~~~~~~------------~~~~~~----  352 (795)
T 4a2l_A          306 SLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN-----------------RFKNIR------------NIPYKN----  352 (795)
T ss_dssp             SCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG-----------------SSEEEC------------CCTTSS----
T ss_pred             CCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc-----------------cceEEc------------CCCCCC----
Confidence              123455555555555442 22233333321100                 000000            000000    


Q ss_pred             eccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCccee-cCCCCceEE
Q psy10063        687 NPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPIL-AGPVDIGFK  765 (894)
Q Consensus       687 ~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~-~~h~~~v~~  765 (894)
                       ......             ...+....+|.++.- ...       ..|..+....+............. ......|.+
T Consensus       353 -~l~~~~-------------V~~i~~d~~g~lWiG-t~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~  410 (795)
T 4a2l_A          353 -SLSDNV-------------VSCIVEDKDKNLWIG-TND-------GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKA  410 (795)
T ss_dssp             -SCSCSS-------------EEEEEECTTSCEEEE-ESS-------SCEEEECTTTCCEEEECCC------CCSCSCEEE
T ss_pred             -CCCCCe-------------eEEEEECCCCCEEEE-ECC-------CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEE
Confidence             000000             011112222222211 111       011111111111000000000000 012356889


Q ss_pred             EeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCccee
Q psy10063        766 MPEPPKREKLALALADKVSERYRDRKNKATAGFL-------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF  838 (894)
Q Consensus       766 la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l  838 (894)
                      ++..+++.+|.+|..++.|.+|+...++...-..       ..+.++....+|. |.++...+     |.+||.++++..
T Consensus       411 i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt~~G-----l~~~~~~~~~~~  484 (795)
T 4a2l_A          411 VYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWLGTLSA-----LVRFNPEQRSFT  484 (795)
T ss_dssp             EEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEESSC-----EEEEETTTTEEE
T ss_pred             EEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEecCc-----eeEEeCCCCeEE
Confidence            9988888867777777779999987665422111       1122333444454 44444432     899998876544


Q ss_pred             eecc------CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063        839 ARIK------GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       839 ~~l~------gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      ....      .+...|.+|...++|++.+... +| |.+|+.+.+.+
T Consensus       485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~~~~~  529 (795)
T 4a2l_A          485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQEGLDI  529 (795)
T ss_dssp             ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEETTEE
T ss_pred             EccccccccccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCCCCeE
Confidence            3221      1346799999999998776654 44 88888876654

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.04  E-value=4.5e-08  Score=117.60  Aligned_cols=204  Identities=13%  Similarity=0.075  Sum_probs=119.6

Q ss_pred             cceeeeeccCccEEEecC-CCeEEEEEecCCCC----------E-EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEe
Q psy10063        380 VDRLNSMSPAARKLATNA-EPVVKMQVTDQSAK----------I-TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESI  447 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~-~~~~~~~l~~H~~~----------V-~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l  447 (894)
                      ..++...+.++++.+... .+.++..+..+...          + ..+++  ++.+|++++.|+.|+.||.++|+.+..+
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~  147 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV  147 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence            345555566666666543 33444444322210          1 11222  4668899999999999999999998777


Q ss_pred             cCC-CCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE-----CCCCEEEEEcCCCcEEEEEeCC--C-
Q psy10063        448 SGH-AKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS-----KDHTAKLFTTHDRQLLKTYTTE--R-  518 (894)
Q Consensus       448 ~~h-~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs-----~Dg~V~iwdl~~~~~~~~~~~~--~-  518 (894)
                      ... .......+..+                ++    + .++.+++.++     .+|.|+.||+++|+++..+...  . 
T Consensus       148 ~~~~~~~~~~~~~~s----------------P~----v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p  206 (689)
T 1yiq_A          148 DTRADHKRSYTITGA----------------PR----V-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDP  206 (689)
T ss_dssp             ECCSCTTSCCBCCSC----------------CE----E-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred             cCcCCCCCCccccCC----------------cE----E-ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCc
Confidence            643 11000000001                11    1 1333333222     3789999999999998877521  0 


Q ss_pred             -----------------------------CeeEEEEcCCCCEEEEEECCCCeEEEeccC-------ccceeeEEEEeccc
Q psy10063        519 -----------------------------PVNSAALSPILPHVVLGGGQEAREVTTTST-------KVGKFDARFYHLIF  562 (894)
Q Consensus       519 -----------------------------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~-------~~~~~~v~vwd~~~  562 (894)
                                                   ....+++++++.+|+++..++..  |....       ....-.|..||.++
T Consensus       207 ~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~--w~~~~~~~~~gd~~y~~~v~AlD~~T  284 (689)
T 1yiq_A          207 KLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSL--WDPKWRSQAKGDNLFLSSIVAVNADT  284 (689)
T ss_dssp             TSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHHTTCSCCTTTTEEEEEETTT
T ss_pred             ccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCc--cccCCCCCCCCCceeeeeEEEEEccC
Confidence                                         01257899999999998876531  21100       00001388899999


Q ss_pred             cceEEEccC--CC-------CCeEEEEEecCCC---EEEEEeCCCcEEEEECCCCccc
Q psy10063        563 EEEFARIKG--HF-------GPINSLAFHPDGK---SYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       563 ~~~~~~l~~--h~-------~~V~~l~~spdg~---~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      |+.+-.+..  |.       ..+....+..+|+   .|+.++.+|.|+++|.++++.+
T Consensus       285 G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  342 (689)
T 1yiq_A          285 GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL  342 (689)
T ss_dssp             CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred             CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence            998876653  32       1122222333665   7889999999999999887644

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.04  E-value=4.8e-08  Score=109.81  Aligned_cols=188  Identities=11%  Similarity=0.038  Sum_probs=118.2

Q ss_pred             CccceeeeeccCccEEEecCCC-eEEE---------EEecCCCCEEEEEEccCCCEEEEecCCC--cEEEEecCCCeEEE
Q psy10063        378 LSVDRLNSMSPAARKLATNAEP-VVKM---------QVTDQSAKITSLLWGNLDQYIITGHAKG--DICTWDLRMGRELE  445 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~-~~~~---------~l~~H~~~V~~l~~spdg~~L~sgs~Dg--~I~iWd~~tg~~~~  445 (894)
                      +.....++++++|++++..... .+++         .+........ ++|++++++|+++..++  .|.+|+...+....
T Consensus       130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            3344566788888877665432 2221         1111122233 89999999999888766  78888887655433


Q ss_pred             Ee---cC-CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE----EeCC
Q psy10063        446 SI---SG-HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT----YTTE  517 (894)
Q Consensus       446 ~l---~~-h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~----~~~~  517 (894)
                      .+   .. ...                         .+.+++++|++..|+.+..++.|+.||+..+.....    ....
T Consensus       209 ~~g~~~~~~~~-------------------------~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~  263 (409)
T 3hrp_A          209 RIGQLGSTFSG-------------------------KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS  263 (409)
T ss_dssp             EEEECCTTSCS-------------------------CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred             EeeeccchhcC-------------------------CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence            33   11 222                         567788888544555577788899999987764332    1112


Q ss_pred             C-Ce-e-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC---------------CCCeEEE
Q psy10063        518 R-PV-N-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---------------FGPINSL  579 (894)
Q Consensus       518 ~-~v-~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h---------------~~~V~~l  579 (894)
                      . .. . .++|+|++..|+++......             |++|+....  +..+.++               ......|
T Consensus       264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~-------------I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gi  328 (409)
T 3hrp_A          264 LGTNPGPYLIYYFVDSNFYMSDQNLSS-------------VYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGM  328 (409)
T ss_dssp             CCCSSCCEEEEETTTTEEEEEETTTTE-------------EEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEE
T ss_pred             CCCCccccEEEeCCCCEEEEEeCCCCE-------------EEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEE
Confidence            1 12 3 99999977777776654432             555554422  2222222               2457899


Q ss_pred             EEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        580 AFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       580 ~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                      +|+++|+++++-. .++.|++|++..+.
T Consensus       329 a~d~dG~lyvad~~~~~~I~~~~~~~G~  356 (409)
T 3hrp_A          329 TVDEDGNFYIVDGFKGYCLRKLDILDGY  356 (409)
T ss_dssp             EECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred             EEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence            9999999777777 78899999976654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.02  E-value=9.3e-08  Score=102.39  Aligned_cols=182  Identities=12%  Similarity=0.090  Sum_probs=113.1

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      +...+.+++|+++|+++++.  ++.|.+||.++++............                     ...+.+++++++
T Consensus        52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~---------------------~~~~~di~~d~d  108 (297)
T 3g4e_A           52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKK---------------------NNRFNDGKVDPA  108 (297)
T ss_dssp             CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCS---------------------SEEEEEEEECTT
T ss_pred             CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCC---------------------CCCCCCEEECCC
Confidence            45789999999999965554  4579999998887543332211100                     013556666666


Q ss_pred             CCEEEEEEC---------CCCEEEEEcC-CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        488 ATMFITASK---------DHTAKLFTTH-DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       488 g~~L~sgs~---------Dg~V~iwdl~-~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      |+++++...         .....||.+. .++.............++|+||++.|+++......             |.+
T Consensus       109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~-------------i~~  175 (297)
T 3g4e_A          109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYS-------------VDA  175 (297)
T ss_dssp             SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTE-------------EEE
T ss_pred             CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCc-------------EEE
Confidence            665444322         1234555554 34444444444567899999999988777654321             555


Q ss_pred             Eec--cccc-----eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc----CCCceeeeEEC-cCCcE
Q psy10063        558 YHL--IFEE-----EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS----EGSFTSSSTQQ-PDGLV  625 (894)
Q Consensus       558 wd~--~~~~-----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~----~~~~v~~~~~s-pdg~~  625 (894)
                      |++  ..+.     .+..+..+.+.+..|+++++|.+.++...++.|.+|+.++++.+.    ....+.+++|. |++..
T Consensus       176 ~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~  255 (297)
T 3g4e_A          176 FDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE  255 (297)
T ss_dssp             EEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred             EeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence            554  3332     223333445678899999999888887778889999998665432    12455666665 55543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.02  E-value=7.9e-08  Score=106.25  Aligned_cols=115  Identities=9%  Similarity=-0.010  Sum_probs=76.4

Q ss_pred             EEEe--cCCCEEEEE-ECCCCEEEEEcCCC----cEEEEEe--------CCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        482 MQFS--KDATMFITA-SKDHTAKLFTTHDR----QLLKTYT--------TERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       482 l~~s--pdg~~L~sg-s~Dg~V~iwdl~~~----~~~~~~~--------~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                      ..++  .++++|+.. ..++.|.|+|+.+.    ++++.++        +......+..+|+| .++++.++..      
T Consensus        87 ~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~------  159 (462)
T 2ece_A           87 PNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEE------  159 (462)
T ss_dssp             TTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETT------
T ss_pred             cccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcC------
Confidence            3456  677776664 56788999999755    6777773        11355678889999 5555444310      


Q ss_pred             cCccceeeEEEEeccccceEEEccCC---CCCeEEEEEecCCCEEEEEe-------------------CCCcEEEEECCC
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKGH---FGPINSLAFHPDGKSYASGG-------------------EDGFLISNTLSN  604 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~h---~~~V~~l~~spdg~~l~sgs-------------------~Dg~I~vwdl~~  604 (894)
                        ..+.-.|.++|.++++.+..+...   ...-+.+.|+|+++.+++..                   .+..|.+||+..
T Consensus       160 --g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~  237 (462)
T 2ece_A          160 --GEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK  237 (462)
T ss_dssp             --SCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred             --CCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence              011123889999999999888632   22345688999999888874                   256788888765


Q ss_pred             C
Q psy10063        605 G  605 (894)
Q Consensus       605 ~  605 (894)
                      +
T Consensus       238 ~  238 (462)
T 2ece_A          238 R  238 (462)
T ss_dssp             T
T ss_pred             C
Confidence            4

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.99  E-value=8.7e-06  Score=99.73  Aligned_cols=180  Identities=7%  Similarity=0.059  Sum_probs=117.0

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC------CCCCeeEEEEcCCCCEEEEEeCCCCc------
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH------AKEPINDMQFSKDATMFITASHSQAV------  476 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h------~~~~V~~v~~spdg~~la~~~~d~~i------  476 (894)
                      ...|.++...++|.+.+. ..++-|.+||..+++........      ....|.++...++|.+.+.. ..|-.      
T Consensus       214 ~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~  291 (795)
T 4a2l_A          214 TKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FNDLNIYHEGT  291 (795)
T ss_dssp             CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SSCEEEEETTT
T ss_pred             CCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CChhheEcCCC
Confidence            467889988888765554 43434899998877654432211      12268999998888765533 22211      


Q ss_pred             ------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-------CCCCeeEEEEcCCCCE
Q psy10063        477 ------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-------TERPVNSAALSPILPH  531 (894)
Q Consensus       477 ------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-------~~~~v~~l~~spdg~~  531 (894)
                                        ..|.+|...++|. |..|+.++-|.+|+...++......       ....|.+++...+|. 
T Consensus       292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-  369 (795)
T 4a2l_A          292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-  369 (795)
T ss_dssp             TEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-
T ss_pred             CeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-
Confidence                              3588888888877 4557777779999876554332211       134689999988876 


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc--------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK--------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      |.+|..++.              |.+|+...++......        .....|.+++..++|+.|..|..++.|.+|+.+
T Consensus       370 lWiGt~~~G--------------l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~  435 (795)
T 4a2l_A          370 LWIGTNDGG--------------LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN  435 (795)
T ss_dssp             EEEEESSSC--------------EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred             EEEEECCCC--------------eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence            555666644              6666666554433221        123579999998888856677777779999987


Q ss_pred             CCc
Q psy10063        604 NGL  606 (894)
Q Consensus       604 ~~~  606 (894)
                      .++
T Consensus       436 ~~~  438 (795)
T 4a2l_A          436 SGQ  438 (795)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            653

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.98  E-value=1.3e-11  Score=137.23  Aligned_cols=142  Identities=12%  Similarity=0.111  Sum_probs=77.7

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCC
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHT  499 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~  499 (894)
                      ++.+|++++.||.|+.||..+|+.+..+..  +                         .+.+..+..++.++++++.||.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~-------------------------~~~s~p~~~~g~~~v~~s~dg~   60 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--D-------------------------PVLQVPTHVEEPAFLPDPNDGS   60 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--C-------------------------CSCCCC-----CCEEECTTTCC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--C-------------------------CceecceEcCCCEEEEeCCCCE
Confidence            578999999999999999999999888776  3                         2333334456777777789999


Q ss_pred             EEEEEcCCCcEEEEEeCCC--Cee-EEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe
Q psy10063        500 AKLFTTHDRQLLKTYTTER--PVN-SAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI  576 (894)
Q Consensus       500 V~iwdl~~~~~~~~~~~~~--~v~-~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V  576 (894)
                      |+.||.++|+.+..+..+.  .+. +.++. ++..|++++.++.              |+.||.++|+.+..+..+.   
T Consensus        61 l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~--------------v~a~D~~tG~~~w~~~~~~---  122 (369)
T 2hz6_A           61 LYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDI--------------WYVIDLLTGEKQQTLSSAF---  122 (369)
T ss_dssp             EEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEE--------------EEEECCC---------------
T ss_pred             EEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCE--------------EEEEECCCCcEEEEecCCC---
Confidence            9999999998876665321  111 11111 3445666665554              8889999898887766543   


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        577 NSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       577 ~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                       .+.++|++..|++++.|+.|+.||.++++.
T Consensus       123 -~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~  152 (369)
T 2hz6_A          123 -ADSLSPSTSLLYLGRTEYTITMYDTKTREL  152 (369)
T ss_dssp             -----------EEEEEEEEEEECCCSSSSSC
T ss_pred             -cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence             234566888899999999999999877653

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.97  E-value=4.2e-11  Score=133.01  Aligned_cols=104  Identities=11%  Similarity=0.040  Sum_probs=63.2

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF  566 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~  566 (894)
                      ++.+|++++.||.|+.||.++|+++..+.. +.+.+..+..++..+++++.++.              |+.||.++|+.+
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~--------------l~a~d~~tG~~~   72 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGS--------------LYTLGSKNNEGL   72 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCC--------------EEEC-----CCS
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCE--------------EEEEECCCCcee
Confidence            577899999999999999999999988887 66666667777877777677776              777888777766


Q ss_pred             EEccCCCC-CeE-EEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        567 ARIKGHFG-PIN-SLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       567 ~~l~~h~~-~V~-~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ..+..+.. .+. +..+. ++..|++++.|+.|+.||.++++
T Consensus        73 w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~  113 (369)
T 2hz6_A           73 TKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGE  113 (369)
T ss_dssp             EECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---
T ss_pred             eeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCc
Confidence            55543321 110 11111 34567778888899999987665

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.96  E-value=1.7e-07  Score=103.78  Aligned_cols=107  Identities=8%  Similarity=-0.051  Sum_probs=76.4

Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc-CCCCCeeE
Q psy10063        772 REKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFGPINS  850 (894)
Q Consensus       772 g~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~-gH~~~V~~  850 (894)
                      +..|++++.++.|..+|..+++.+....... ......++..++++..++    .|+.+|.++|+.+.... .+...+..
T Consensus       239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~l~~~~~~g----~l~~~d~~tG~~~w~~~~~~~~~~~~  313 (376)
T 3q7m_A          239 NGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIVDGNRIYLVDQND----RVMALTIDGGVTLWTQSDLLHRLLTS  313 (376)
T ss_dssp             TTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEEETTEEEEEETTC----CEEEEETTTCCEEEEECTTTTSCCCC
T ss_pred             CCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceEECCEEEEEcCCC----eEEEEECCCCcEEEeecccCCCcccC
Confidence            4567777788999999999888776554332 223444577777777665    49999999998876655 22223333


Q ss_pred             EEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        851 LAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       851 l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      +.+.  +..|+.++.+|.|++||.+.++++..+++
T Consensus       314 ~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~  346 (376)
T 3q7m_A          314 PVLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKV  346 (376)
T ss_dssp             CEEE--TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CEEE--CCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence            3332  56788888999999999999998887776

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.96  E-value=3.7e-08  Score=108.02  Aligned_cols=188  Identities=11%  Similarity=-0.004  Sum_probs=117.8

Q ss_pred             cCCCCEEEEEEccCCCEEEEecC-----CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHA-----KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~-----Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      +|...+.+|+|+++|+++++-..     ++.|.+||+.+++.++.+..... ..      +.+            ..+..
T Consensus        64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~------~~~------------~~~~~  124 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-IT------LSN------------SFVND  124 (343)
T ss_dssp             CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TS------CTT------------CCCCE
T ss_pred             cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hc------ccc------------cccce
Confidence            45678999999999986665433     57899999999998777754321 00      000            03456


Q ss_pred             EEEecCCCEE-EEEE---CCCCEEEEEcCCCcEEEEEeC------------------------------CCCeeEEEEcC
Q psy10063        482 MQFSKDATMF-ITAS---KDHTAKLFTTHDRQLLKTYTT------------------------------ERPVNSAALSP  527 (894)
Q Consensus       482 l~~spdg~~L-~sgs---~Dg~V~iwdl~~~~~~~~~~~------------------------------~~~v~~l~~sp  527 (894)
                      |++++++.++ ++..   .++.|.+||+.+++..+.+..                              ...+..|+|+|
T Consensus       125 v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~  204 (343)
T 2qe8_A          125 LAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA  204 (343)
T ss_dssp             EEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT
T ss_pred             EEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc
Confidence            6666644333 3333   467788888877766554422                              02357899999


Q ss_pred             CCCEEEEEECCCCeEEEeccCccceeeEEEEecc---c-----cceEE--EccCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063        528 ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI---F-----EEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDGFL  597 (894)
Q Consensus       528 dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~---~-----~~~~~--~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I  597 (894)
                      ||+.|+++...+. .            |..++..   .     ++...  ...++.+....|+++++|.++++...++.|
T Consensus       205 dg~~ly~~~~~~~-~------------l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V  271 (343)
T 2qe8_A          205 ENEWLYLSPMHST-S------------MYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAI  271 (343)
T ss_dssp             TSCEEEEEESSCS-E------------EEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEE
T ss_pred             CCCEEEEEeCCCC-e------------EEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeE
Confidence            9999999887664 2            2233221   0     00000  111344456789999999999988889999


Q ss_pred             EEEECCCCccc--c---CCCceeeeEECcCCcEE
Q psy10063        598 ISNTLSNGLDI--S---EGSFTSSSTQQPDGLVY  626 (894)
Q Consensus       598 ~vwdl~~~~~~--~---~~~~v~~~~~spdg~~l  626 (894)
                      .+|+.+.++..  .   ....+..+++.++|.++
T Consensus       272 ~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~  305 (343)
T 2qe8_A          272 GVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLY  305 (343)
T ss_dssp             EEEETTTTEEEEEEECGGGSCEEEEEECTTSCEE
T ss_pred             EEEECCCCCEEEEEECCceecCCeeEECCCCcEE
Confidence            99998444311  1   13345566666666544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.94  E-value=1.4e-08  Score=110.09  Aligned_cols=108  Identities=6%  Similarity=-0.150  Sum_probs=65.7

Q ss_pred             eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccC---CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063        763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLS---CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA  839 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~---~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~  839 (894)
                      +.++++.+++. |.+++.++.|..++. .++.+..+...   ...+++..++ .|+++..++    .|+.+|. .++.+.
T Consensus       217 ~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~g----gl~~~d~-~g~~~~  288 (330)
T 3hxj_A          217 VTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDG----HLYAINP-DGTEKW  288 (330)
T ss_dssp             CSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTC----EEEEECT-TSCEEE
T ss_pred             eeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCC----CEEEECC-CCcEEE
Confidence            45566666654 445556677777763 44444333322   1233444344 566666554    4899996 677776


Q ss_pred             eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccc
Q psy10063        840 RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYF  879 (894)
Q Consensus       840 ~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~  879 (894)
                      .+......+.++.+..+|+ |..++.+|.|++...+..+.
T Consensus       289 ~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~~  327 (330)
T 3hxj_A          289 NFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHHH  327 (330)
T ss_dssp             EEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-----
T ss_pred             EEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccccc
Confidence            6666666788888888887 55578899999888765543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.93  E-value=2.6e-08  Score=120.19  Aligned_cols=207  Identities=9%  Similarity=0.052  Sum_probs=132.4

Q ss_pred             eeeeccCccEEEecC----CCeEEEE---------EecCCCCE--EEEEEccCCCEEEEecCCC-------------cEE
Q psy10063        383 LNSMSPAARKLATNA----EPVVKMQ---------VTDQSAKI--TSLLWGNLDQYIITGHAKG-------------DIC  434 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~----~~~~~~~---------l~~H~~~V--~~l~~spdg~~L~sgs~Dg-------------~I~  434 (894)
                      ..+|||||++|+...    .....+.         +..+...+  .+++|+ ||+.|+.++.+.             .|+
T Consensus       133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~  211 (693)
T 3iuj_A          133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVY  211 (693)
T ss_dssp             EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEE
T ss_pred             EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEE
Confidence            347999999998532    2112211         11122223  578999 999999887774             399


Q ss_pred             EEecCCCeE--EEEec--C-CCCCCeeEEEEcCCCCEEEEEeCCC----Cc-------------------cceEEEEEec
Q psy10063        435 TWDLRMGRE--LESIS--G-HAKEPINDMQFSKDATMFITASHSQ----AV-------------------EPINDMQFSK  486 (894)
Q Consensus       435 iWd~~tg~~--~~~l~--~-h~~~~V~~v~~spdg~~la~~~~d~----~i-------------------~~V~~l~~sp  486 (894)
                      +|++.++..  +..+.  . |.. .+..+.|+|||++|+.....+    .+                   ..+... |++
T Consensus       212 ~~~lgt~~~~~~~v~~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~  289 (693)
T 3iuj_A          212 FHRLGTAQEDDRLVFGAIPAQHH-RYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN  289 (693)
T ss_dssp             EEETTSCGGGCEEEESCSGGGCC-SEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred             EEECCCCcccceEEEecCCCCCe-EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence            999987642  23333  3 343 678999999999987654322    11                   112222 566


Q ss_pred             CCCEEEEEEC-C---CCEEEEEcCCCcE---EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        487 DATMFITASK-D---HTAKLFTTHDRQL---LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       487 dg~~L~sgs~-D---g~V~iwdl~~~~~---~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +|..|+..+. +   +.|.+||+..+..   ...+.+...+.  .|++++++|++...++..           ..|++|+
T Consensus       290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~-----------~~l~~~d  356 (693)
T 3iuj_A          290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT-----------ARVEQFD  356 (693)
T ss_dssp             ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE-----------EEEEEEC
T ss_pred             cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe-----------eEEEEEE
Confidence            6666655543 3   5799999988764   33344444454  899999999887765542           2378888


Q ss_pred             ccccceEEEcc-CCCCCeEEEEEecCCCEEEEEeCC----CcEEEEECCCCc
Q psy10063        560 LIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGED----GFLISNTLSNGL  606 (894)
Q Consensus       560 ~~~~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~D----g~I~vwdl~~~~  606 (894)
                      +..+ ..+.+. .+.+.+..+.++++++.|+....+    +.|++||+..++
T Consensus       357 ~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          357 YEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             TTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             CCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            8744 444443 344567788888888866655444    789999987764

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.92  E-value=1.2e-06  Score=92.03  Aligned_cols=112  Identities=7%  Similarity=-0.025  Sum_probs=69.6

Q ss_pred             ceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITAS-KDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .+.+++|++++..|+.+. ..+.|.++++..+.....+... .....+++++++..|+++......             |
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~-------------I  103 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR-------------I  103 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTE-------------E
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCE-------------E
Confidence            467888888665555544 5678999998766554444333 578999999988888887765432             5


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC---CcEEEEEC
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED---GFLISNTL  602 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D---g~I~vwdl  602 (894)
                      .++++........+.........+++++++.+|+.+...   +.|.++++
T Consensus       104 ~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~  153 (267)
T 1npe_A          104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM  153 (267)
T ss_dssp             EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred             EEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence            666665322221222222456788898876665555432   34544443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.92  E-value=1.1e-07  Score=105.17  Aligned_cols=209  Identities=12%  Similarity=0.086  Sum_probs=134.2

Q ss_pred             cCCCEEEE-ecCCCcEEEEecCCC----eEEEEec------CCCCCCeeEEEEcCCCCEEEEEeCC------CCc-----
Q psy10063        419 NLDQYIIT-GHAKGDICTWDLRMG----RELESIS------GHAKEPINDMQFSKDATMFITASHS------QAV-----  476 (894)
Q Consensus       419 pdg~~L~s-gs~Dg~I~iWd~~tg----~~~~~l~------~h~~~~V~~v~~spdg~~la~~~~d------~~i-----  476 (894)
                      +++++|+. |..++.|.|+|+.+.    +.++.++      .........+..+|+| +++++..+      +.+     
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            78887665 566788999999765    7777773      1111145667888999 55544333      112     


Q ss_pred             ----------------cceEEEEEecCCCEEEEEE-------------------CCCCEEEEEcCCCcEEEEEeCC---C
Q psy10063        477 ----------------EPINDMQFSKDATMFITAS-------------------KDHTAKLFTTHDRQLLKTYTTE---R  518 (894)
Q Consensus       477 ----------------~~V~~l~~spdg~~L~sgs-------------------~Dg~V~iwdl~~~~~~~~~~~~---~  518 (894)
                                      ..-+.+.|+|+++.+++..                   .+..|.+||+.++++++.+...   .
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence                            1234578899999888874                   3688999999999999988864   3


Q ss_pred             CeeEEEE--cCCCCEEEEEEC-----C-CCeEEEeccCccceee-EEEEeccccceEEEcc-------CCCCCeEEEEEe
Q psy10063        519 PVNSAAL--SPILPHVVLGGG-----Q-EAREVTTTSTKVGKFD-ARFYHLIFEEEFARIK-------GHFGPINSLAFH  582 (894)
Q Consensus       519 ~v~~l~~--spdg~~l~~~~~-----~-~~~~v~~~~~~~~~~~-v~vwd~~~~~~~~~l~-------~h~~~V~~l~~s  582 (894)
                      ....|.|  +|+|+++++++.     . +.+.+|..+.  +.|. +++.|+...+....+.       +-......|.++
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS  329 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS  329 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence            4455656  999999999885     3 4555555543  3332 3444444322211111       002457889999


Q ss_pred             cCCCEEEEEeC-CCcEEEEECCCCc---c---ccCC-----------C----ceeeeEECcCCcEEEecC
Q psy10063        583 PDGKSYASGGE-DGFLISNTLSNGL---D---ISEG-----------S----FTSSSTQQPDGLVYPSQG  630 (894)
Q Consensus       583 pdg~~l~sgs~-Dg~I~vwdl~~~~---~---~~~~-----------~----~v~~~~~spdg~~l~~~~  630 (894)
                      +||++|+++.. .+.|.+||+....   .   +..+           .    ....+.++|||+++....
T Consensus       330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            99999887764 6789999986332   1   1112           1    356677777777664443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.91  E-value=6.3e-07  Score=97.33  Aligned_cols=158  Identities=11%  Similarity=0.018  Sum_probs=100.4

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      +...|.+++|+++|+++++. .+ .|.+||..+++..........                     .....+.+++++++
T Consensus        88 ~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~---------------------~~~~~~~~i~~d~~  144 (326)
T 2ghs_A           88 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESD---------------------LPGNRSNDGRMHPS  144 (326)
T ss_dssp             CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTT---------------------CTTEEEEEEEECTT
T ss_pred             CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCC---------------------CCCCCCCCEEECCC
Confidence            35689999999999877765 34 499999988875433221110                     00014566777777


Q ss_pred             CCEEEEEEC------CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecc
Q psy10063        488 ATMFITASK------DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLI  561 (894)
Q Consensus       488 g~~L~sgs~------Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~  561 (894)
                      |+++++...      .+.|..++  +++.............++|++||+.|+++.....             .|.+|++.
T Consensus       145 G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~-------------~I~~~d~~  209 (326)
T 2ghs_A          145 GALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN-------------RLMRVPLD  209 (326)
T ss_dssp             SCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC-------------EEEEEEBC
T ss_pred             CCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC-------------EEEEEEcc
Confidence            765554432      23444445  5555443333456789999999998887765432             15666654


Q ss_pred             --cc-c-----eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        562 --FE-E-----EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       562 --~~-~-----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                        .+ +     .+..+..+...+.+++++++|.++++...++.|.+|+..
T Consensus       210 ~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~  259 (326)
T 2ghs_A          210 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD  259 (326)
T ss_dssp             TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred             cccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence              34 2     222333345567889999999887777677889999984

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.90  E-value=1.3e-07  Score=113.13  Aligned_cols=67  Identities=10%  Similarity=0.090  Sum_probs=53.0

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|+.||+.+|+.+-++..+ .++....+...+.+|+.++.||.|++||.+.++.+.++++...+...|
T Consensus       439 ~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p  505 (668)
T 1kv9_A          439 ALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAP  505 (668)
T ss_dssp             EEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCc
Confidence            5999999999988766543 334445666778889999999999999999999999998876555443

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.87  E-value=3.6e-07  Score=107.15  Aligned_cols=66  Identities=9%  Similarity=-0.050  Sum_probs=49.9

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQ  892 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~q  892 (894)
                      .|+.||+.+|+.+-++... ..+....+...+.+|+.++.||.|++||.+.++.+.++++...+...
T Consensus       445 ~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~  510 (571)
T 2ad6_A          445 QIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS  510 (571)
T ss_dssp             EEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred             eEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEee
Confidence            6999999999988766532 23334444555667777999999999999999999999877655443

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.87  E-value=0.00022  Score=86.93  Aligned_cols=210  Identities=9%  Similarity=0.029  Sum_probs=123.3

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC----C--CCCCeeEEEEcC--CCCEEEEEeCCCCc-----
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG----H--AKEPINDMQFSK--DATMFITASHSQAV-----  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~----h--~~~~V~~v~~sp--dg~~la~~~~d~~i-----  476 (894)
                      ..|.+|....+|..|..|..++-|.+||..+++.......    .  ....|.+|....  +|.+.+.....+-.     
T Consensus        66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~  145 (781)
T 3v9f_A           66 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIA  145 (781)
T ss_dssp             SCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETT
T ss_pred             cccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECC
Confidence            3599999888887466677775699999987775433111    0  112588888777  66544432122110     


Q ss_pred             -----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--------CCCCeeEEEEcCCCCE
Q psy10063        477 -----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--------TERPVNSAALSPILPH  531 (894)
Q Consensus       477 -----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--------~~~~v~~l~~spdg~~  531 (894)
                                       ..|.+|....+|.+. .+..++-|..||...++......        ....|.+|....+|.+
T Consensus       146 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l  224 (781)
T 3v9f_A          146 TGKFTHYNKSTVPALPSEQTWTATEAEDGKLY-IGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNI  224 (781)
T ss_dssp             TTEEEEESTTTCTTCSCCCEEEEEEEETTEEE-EEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCE
T ss_pred             CCeEEeeccCcccCCCccceEEEEECCCCCEE-EEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCE
Confidence                             236677766666544 46666568899988776543211        1346888888888765


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      .+ +...|               |.+||...++......       .....|.+|....+|. |..|...+-|.+++...
T Consensus       225 wi-gt~~G---------------l~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~  287 (781)
T 3v9f_A          225 WI-GTSKG---------------LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ  287 (781)
T ss_dssp             EE-EETTE---------------EEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred             EE-EeCCc---------------HheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence            54 44443               6667765544322111       1235689999888776 45556645688888766


Q ss_pred             Cccc------------------cCCCceeeeEECcCCcEE-EecCCeEEEEe
Q psy10063        605 GLDI------------------SEGSFTSSSTQQPDGLVY-PSQGGHIHSLS  637 (894)
Q Consensus       605 ~~~~------------------~~~~~v~~~~~spdg~~l-~~~~g~i~~~~  637 (894)
                      .+..                  .....+.++....+|.+. .+.++.+..+.
T Consensus       288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~  339 (781)
T 3v9f_A          288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFIS  339 (781)
T ss_dssp             C---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEEC
T ss_pred             CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeC
Confidence            5311                  112346667777777655 44355555554

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.86  E-value=5.8e-07  Score=105.38  Aligned_cols=67  Identities=15%  Similarity=0.132  Sum_probs=49.1

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|+.||+.+|+.+-+.... .++..-.+.-.+.+|+.++.||.|+.||.++++.+.+++++..+...|
T Consensus       454 ~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P  520 (599)
T 1w6s_A          454 QIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP  520 (599)
T ss_dssp             EEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence            5899999999887655421 222222234456778889999999999999999999998876665544

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.79  E-value=3.4e-06  Score=98.83  Aligned_cols=171  Identities=13%  Similarity=0.073  Sum_probs=104.5

Q ss_pred             EEEEccCCCE----EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE-EEEecCC
Q psy10063        414 SLLWGNLDQY----IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND-MQFSKDA  488 (894)
Q Consensus       414 ~l~~spdg~~----L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~-l~~spdg  488 (894)
                      .++++|++..    |+.++.|+.|+.+|.++|+.+-++..... .        .+.            .+.+ ..+ -++
T Consensus       110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~-~--------~~~------------~~~ssP~v-~~g  167 (599)
T 1w6s_A          110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDI-K--------VGS------------TLTIAPYV-VKD  167 (599)
T ss_dssp             CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCG-G--------GTC------------BCCSCCEE-ETT
T ss_pred             ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCC-C--------ccc------------eeecCCEE-ECC
Confidence            3566554444    88898999999999999998876653221 0        000            0100 011 133


Q ss_pred             CEEEEEE------CCCCEEEEEcCCCcEEEEEeCCCCe---------------------------------------eEE
Q psy10063        489 TMFITAS------KDHTAKLFTTHDRQLLKTYTTERPV---------------------------------------NSA  523 (894)
Q Consensus       489 ~~L~sgs------~Dg~V~iwdl~~~~~~~~~~~~~~v---------------------------------------~~l  523 (894)
                       .|++++      .+|.|+.+|.++|+++..+......                                       ..+
T Consensus       168 -~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~  246 (599)
T 1w6s_A          168 -KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWY  246 (599)
T ss_dssp             -EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCC
T ss_pred             -EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccce
Confidence             344443      3789999999999999887753221                                       145


Q ss_pred             EEcCCCCEEEEEECCCCeEEEeccCccc----eeeEEEEeccccceEEEccC--CCCC----e---EEEEEe-cCC---C
Q psy10063        524 ALSPILPHVVLGGGQEAREVTTTSTKVG----KFDARFYHLIFEEEFARIKG--HFGP----I---NSLAFH-PDG---K  586 (894)
Q Consensus       524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~----~~~v~vwd~~~~~~~~~l~~--h~~~----V---~~l~~s-pdg---~  586 (894)
                      ++.++..+|+++..+...  |......+    .-.|..+|.++|+.+-.++.  |...    +   .-+... .+|   +
T Consensus       247 a~d~~~g~vy~g~g~~~p--~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~  324 (599)
T 1w6s_A          247 AYDPGTNLIYFGTGNPAP--WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK  324 (599)
T ss_dssp             EEETTTTEEEEECCCCSC--SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred             eEeCCCCEEEEeCCCCcc--ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence            677788888888776421  21111000    11377888888888766543  2211    1   112222 467   4


Q ss_pred             EEEEEeCCCcEEEEECCCCcccc
Q psy10063        587 SYASGGEDGFLISNTLSNGLDIS  609 (894)
Q Consensus       587 ~l~sgs~Dg~I~vwdl~~~~~~~  609 (894)
                      .|+.++.+|.|+++|.++++.+.
T Consensus       325 ~v~~~~~~G~l~~lD~~tG~~lw  347 (599)
T 1w6s_A          325 LLTHPDRNGIVYTLDRTDGALVS  347 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEE
T ss_pred             EEEEECCCcEEEEEECCCCCEee
Confidence            67778899999999999888664

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.77  E-value=4.3e-06  Score=100.01  Aligned_cols=165  Identities=15%  Similarity=0.122  Sum_probs=103.1

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE----
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS----  495 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs----  495 (894)
                      ++.+|+.++.|+.|+.+|.++|+.+.++..........+..+                ++    + .++ .|+.+.    
T Consensus       116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~----------------P~----v-~~~-~v~vg~~~~~  173 (668)
T 1kv9_A          116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGA----------------PR----V-VKG-KVIIGNGGAE  173 (668)
T ss_dssp             EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSC----------------CE----E-ETT-EEEECCBCTT
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCC----------------CE----E-ECC-EEEEeCCCCC
Confidence            356888888999999999999999887765321000000000                11    1 133 344433    


Q ss_pred             --CCCCEEEEEcCCCcEEEEEeCC--CC------------------------------eeEEEEcCCCCEEEEEECCCCe
Q psy10063        496 --KDHTAKLFTTHDRQLLKTYTTE--RP------------------------------VNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       496 --~Dg~V~iwdl~~~~~~~~~~~~--~~------------------------------v~~l~~spdg~~l~~~~~~~~~  541 (894)
                        .+|.|+.||+++|+++..+...  .+                              ...+++.+++.+|+++..++..
T Consensus       174 ~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~  253 (668)
T 1kv9_A          174 YGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSP  253 (668)
T ss_dssp             TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEES
T ss_pred             cCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCc
Confidence              2588999999999999887631  10                              1246888888889888766531


Q ss_pred             EEEeccC-------ccceeeEEEEeccccceEEEccC--CC-------CCeEEEEEecCCC---EEEEEeCCCcEEEEEC
Q psy10063        542 EVTTTST-------KVGKFDARFYHLIFEEEFARIKG--HF-------GPINSLAFHPDGK---SYASGGEDGFLISNTL  602 (894)
Q Consensus       542 ~v~~~~~-------~~~~~~v~vwd~~~~~~~~~l~~--h~-------~~V~~l~~spdg~---~l~sgs~Dg~I~vwdl  602 (894)
                        |....       ....-.|..+|..+|+.+-.+..  |.       ..+....+..+|+   .|+.++.+|.|+++|.
T Consensus       254 --w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~  331 (668)
T 1kv9_A          254 --WNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDR  331 (668)
T ss_dssp             --SCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred             --cccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEEC
Confidence              21100       00001378889999988776643  32       2223333334675   6889999999999999


Q ss_pred             CCCccc
Q psy10063        603 SNGLDI  608 (894)
Q Consensus       603 ~~~~~~  608 (894)
                      ++++.+
T Consensus       332 ~tG~~l  337 (668)
T 1kv9_A          332 TNGKLI  337 (668)
T ss_dssp             TTCCEE
T ss_pred             CCCCEe
Confidence            888754

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.75  E-value=2.6e-07  Score=105.63  Aligned_cols=177  Identities=8%  Similarity=0.053  Sum_probs=129.4

Q ss_pred             EEEEcc-----CCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEE-c-CCCCEEEEEeCC-------CCc--
Q psy10063        414 SLLWGN-----LDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQF-S-KDATMFITASHS-------QAV--  476 (894)
Q Consensus       414 ~l~~sp-----dg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~-s-pdg~~la~~~~d-------~~i--  476 (894)
                      .+.+|.     ||++|+.... +..|.+.|+++.++.+.+.--.+..+..++| + |++++++++++.       +..  
T Consensus        89 h~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~  168 (595)
T 1fwx_A           89 HVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME  168 (595)
T ss_dssp             CEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTT
T ss_pred             ccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccc
Confidence            355565     8998887755 4579999999999988665332236889998 5 999999888632       211  


Q ss_pred             --------------------------cceEEEEEecCCCEEEEEECCC--------------------------------
Q psy10063        477 --------------------------EPINDMQFSKDATMFITASKDH--------------------------------  498 (894)
Q Consensus       477 --------------------------~~V~~l~~spdg~~L~sgs~Dg--------------------------------  498 (894)
                                                +....++++|||+++++.+.+.                                
T Consensus       169 ~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G  248 (595)
T 1fwx_A          169 DVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG  248 (595)
T ss_dssp             CGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred             cccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence                                      1124578899999999988653                                


Q ss_pred             ------CEEEEEcCC--CcE-EEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc-----
Q psy10063        499 ------TAKLFTTHD--RQL-LKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE-----  564 (894)
Q Consensus       499 ------~V~iwdl~~--~~~-~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~-----  564 (894)
                            .|.|.|.++  ++. +..+.......++.++|||+++++++.....             |.++|+...+     
T Consensus       249 k~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~-------------VsVid~~~~~~~~~~  315 (595)
T 1fwx_A          249 DYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPT-------------VTVLDVTRFDAVFYE  315 (595)
T ss_dssp             CSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSB-------------EEEEEGGGHHHHHHS
T ss_pred             CeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCe-------------EEEEECccccccccc
Confidence                  478888887  555 6677666778899999999999998865542             7888887553     


Q ss_pred             -------eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        565 -------EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       565 -------~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                             .+..+. -......++|+++|...++.-.|+.|.+|+++.
T Consensus       316 ~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          316 NADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             CCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             ccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence                   233332 234578999999994445666799999999976

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.73  E-value=4.5e-06  Score=97.91  Aligned_cols=67  Identities=15%  Similarity=0.205  Sum_probs=50.4

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|+.||+.+|+.+-++..+. ++..-.+...+.+|+.++.||.|+.||.++++.+.+++++..+...|
T Consensus       467 ~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P  533 (582)
T 1flg_A          467 SLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP  533 (582)
T ss_dssp             EEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCc
Confidence            58999999999886655332 23222333456778889999999999999999999999877666554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.73  E-value=0.00062  Score=80.29  Aligned_cols=182  Identities=6%  Similarity=-0.098  Sum_probs=113.6

Q ss_pred             CCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC----------CCCc-
Q psy10063        409 SAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------SQAV-  476 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~----------d~~i-  476 (894)
                      -..+.+|+|++++..|+.+ ..++.|+.+++........+..... ....|++...+..|..+..          +|.. 
T Consensus        36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~  114 (628)
T 4a0p_A           36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD-YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR  114 (628)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred             CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC-CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence            4568899999976666654 4568899999875544333433222 5677888766555544332          2221 


Q ss_pred             --------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        477 --------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       477 --------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                              .....|++.|...+|+....  .+.|...++........+..-.....|++++++++|+.+......     
T Consensus       115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~-----  189 (628)
T 4a0p_A          115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNL-----  189 (628)
T ss_dssp             EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTE-----
T ss_pred             EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCE-----
Confidence                    34578899986556665553  456777777654444444445678999999999999988776542     


Q ss_pred             cCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                              |..+++..... ..+........+|++.. +.++++-...+.|...|...++
T Consensus       190 --------I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~  239 (628)
T 4a0p_A          190 --------IESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ  239 (628)
T ss_dssp             --------EEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred             --------EEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence                    66666654332 23333344556788764 3444444456778888865554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.71  E-value=1.8e-06  Score=89.91  Aligned_cols=188  Identities=8%  Similarity=0.007  Sum_probs=126.1

Q ss_pred             CCEEEEEEccCCCEEEEecC--CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        410 AKITSLLWGNLDQYIITGHA--KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~--Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .....|+|++|+.++++.+.  ++.|+++|+.+++.+..+.....  .                      ....+++.  
T Consensus        21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~--~----------------------fgeGi~~~--   74 (266)
T 2iwa_A           21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS--Y----------------------FGEGLTLL--   74 (266)
T ss_dssp             CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT--C----------------------CEEEEEEE--
T ss_pred             CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC--c----------------------ceEEEEEe--
Confidence            34789999999755555443  57999999999999888763222  0                      12234443  


Q ss_pred             CCEEEE-EECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063        488 ATMFIT-ASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF  566 (894)
Q Consensus       488 g~~L~s-gs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~  566 (894)
                      +..|+. .-.++.|.++|..+++.+..+... .-..+.+++||++|+++.+.+.              |.++|.++.+.+
T Consensus        75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~--------------l~viD~~t~~v~  139 (266)
T 2iwa_A           75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSI--------------LYEIDPHTFKLI  139 (266)
T ss_dssp             TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSE--------------EEEECTTTCCEE
T ss_pred             CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCe--------------EEEEECCCCcEE
Confidence            444444 446789999999999999998755 1223446678888888765543              888999888887


Q ss_pred             EEccCC-----CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC-----------------CCceeeeEECcCCc
Q psy10063        567 ARIKGH-----FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE-----------------GSFTSSSTQQPDGL  624 (894)
Q Consensus       567 ~~l~~h-----~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~-----------------~~~v~~~~~spdg~  624 (894)
                      ..+.--     ...+..+.|. +|+.++....++.|.+.|.++++.+..                 ......+++.|++.
T Consensus       140 ~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~  218 (266)
T 2iwa_A          140 KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK  218 (266)
T ss_dssp             EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred             EEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence            776422     1246788888 776555555678999999998874321                 12446788999886


Q ss_pred             EEE-ec--CCeEEEEecc
Q psy10063        625 VYP-SQ--GGHIHSLSSH  639 (894)
Q Consensus       625 ~l~-~~--~g~i~~~~~~  639 (894)
                      .+. +.  .+.++.+...
T Consensus       219 ~lfVTgk~~~~v~~i~l~  236 (266)
T 2iwa_A          219 RIFVTGKLWPKLFEIKLH  236 (266)
T ss_dssp             EEEEEETTCSEEEEEEEE
T ss_pred             EEEEECCCCCeEEEEEEe
Confidence            552 22  2455555543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.69  E-value=0.00026  Score=83.38  Aligned_cols=183  Identities=6%  Similarity=-0.077  Sum_probs=105.1

Q ss_pred             CCCCEEEEEEccCCCEEEEec-CCCcEEEEecCCCeE-EEEecCCCCCCeeEEEEcCCCCEEEEEeCC-CCc--------
Q psy10063        408 QSAKITSLLWGNLDQYIITGH-AKGDICTWDLRMGRE-LESISGHAKEPINDMQFSKDATMFITASHS-QAV--------  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs-~Dg~I~iWd~~tg~~-~~~l~~h~~~~V~~v~~spdg~~la~~~~d-~~i--------  476 (894)
                      ..+.+.+|+|++.+..|+.+. ..+.|+.+++..... ...+..... ....|++.+.+..|..+... +.|        
T Consensus        38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~-~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~  116 (619)
T 3s94_A           38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS  116 (619)
T ss_dssp             CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCC-CcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence            445688999999777776654 457888899875532 233333323 78899999876666555432 222        


Q ss_pred             ----------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        477 ----------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       477 ----------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                                .....|++.|.+.+|+....  .+.|...++........+. .-.....|++++++++|+.+......  
T Consensus       117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~--  194 (619)
T 3s94_A          117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF--  194 (619)
T ss_dssp             SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC--
T ss_pred             CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe--
Confidence                      34557888887666665553  3456655655333333332 23567899999998888888765432  


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCc
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGL  606 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~  606 (894)
                                 |..+++........+.+......+|++..+  .|+.. ...+.|.+.|..+++
T Consensus       195 -----------I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~  245 (619)
T 3s94_A          195 -----------IHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE  245 (619)
T ss_dssp             -----------EEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCC
T ss_pred             -----------EEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCc
Confidence                       556665532222222222223356777544  45444 456778888887665

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.65  E-value=0.0013  Score=80.15  Aligned_cols=177  Identities=11%  Similarity=0.049  Sum_probs=106.0

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC------CCCCCeeEEEEcCCCCEEEEEeCCCCc-------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISG------HAKEPINDMQFSKDATMFITASHSQAV-------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~------h~~~~V~~v~~spdg~~la~~~~d~~i-------  476 (894)
                      ..|.++...++|.+.+ |..++-|.+||...++.......      .....|.+|....+|.+.+... .|-.       
T Consensus       163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~-~Gl~~~d~~~~  240 (781)
T 3v9f_A          163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTS-KGLALFNANTE  240 (781)
T ss_dssp             CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEET-TEEEEEETTTT
T ss_pred             cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeC-CcHheECCCCC
Confidence            5688888888776554 55554588999887765332111      1122688888888887655432 1211       


Q ss_pred             -----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---------------CCCCeeEEE
Q psy10063        477 -----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---------------TERPVNSAA  524 (894)
Q Consensus       477 -----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---------------~~~~v~~l~  524 (894)
                                       ..|.+|....+|. |..|...+-|.++|...++......               ....|.+|.
T Consensus       241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~  319 (781)
T 3v9f_A          241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF  319 (781)
T ss_dssp             EEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred             cEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence                             2477777777776 4556665668899988766443221               134688999


Q ss_pred             EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc---------cCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI---------KGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l---------~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      ...+|. |.+|..++.              |..++...+......         ......|.+|....+|. |..|..++
T Consensus       320 ~D~~g~-lWigt~~~G--------------l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~  383 (781)
T 3v9f_A          320 QDSFNN-IWIGTWGGG--------------INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGG  383 (781)
T ss_dssp             ECSSCC-EEEEEBSSC--------------EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSS
T ss_pred             EeCCCC-EEEEecCCe--------------EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCC
Confidence            988876 555664554              555555433322211         01235689999888776 45566566


Q ss_pred             cEEEEECCCC
Q psy10063        596 FLISNTLSNG  605 (894)
Q Consensus       596 ~I~vwdl~~~  605 (894)
                      -|.+|+...+
T Consensus       384 Gl~~~~~~~~  393 (781)
T 3v9f_A          384 GINVFENGKR  393 (781)
T ss_dssp             CEEEEETTEE
T ss_pred             cEEEEECCCC
Confidence            6888887654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.63  E-value=1.8e-05  Score=92.55  Aligned_cols=165  Identities=15%  Similarity=0.096  Sum_probs=99.7

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE-EEEEecCCCEEEEEEC--
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN-DMQFSKDATMFITASK--  496 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~-~l~~spdg~~L~sgs~--  496 (894)
                      ++.+|+.++.|+.|..+|.++|+.+.++..... ..        +.            .+. ...+. ++ .|+.++.  
T Consensus       114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~-~~--------~~------------~~~~~P~v~-~g-~v~vg~~~~  170 (571)
T 2ad6_A          114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDP-KV--------GS------------TLTQAPFVA-KD-TVLMGCSGA  170 (571)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCCG-GG--------TC------------BCCSCCEEE-TT-EEEEECBCG
T ss_pred             ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCC-Cc--------cc------------eeccCCEEE-CC-EEEEEecCC
Confidence            366888888899999999999998877653221 00        00            010 00111 33 4455443  


Q ss_pred             ----CCCEEEEEcCCCcEEEEEeCCCCe---------------------------------------eEEEEcCCCCEEE
Q psy10063        497 ----DHTAKLFTTHDRQLLKTYTTERPV---------------------------------------NSAALSPILPHVV  533 (894)
Q Consensus       497 ----Dg~V~iwdl~~~~~~~~~~~~~~v---------------------------------------~~l~~spdg~~l~  533 (894)
                          ++.|+.+|.++|+++..+......                                       ..+++.++...|+
T Consensus       171 ~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy  250 (571)
T 2ad6_A          171 ELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFY  250 (571)
T ss_dssp             GGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEE
T ss_pred             ccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEE
Confidence                789999999999999887653221                                       2356777777888


Q ss_pred             EEECCCCeEEEeccCccc--e--eeEEEEeccccceEEEccC--CCC----CeEE---EEEecCCC---EEEEEeCCCcE
Q psy10063        534 LGGGQEAREVTTTSTKVG--K--FDARFYHLIFEEEFARIKG--HFG----PINS---LAFHPDGK---SYASGGEDGFL  597 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~--~--~~v~vwd~~~~~~~~~l~~--h~~----~V~~---l~~spdg~---~l~sgs~Dg~I  597 (894)
                      ++......  |......+  .  -.|..+|.++|+.+-.++.  |..    .+..   +....+|+   .|+.++.+|.|
T Consensus       251 ~~~g~~~~--~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l  328 (571)
T 2ad6_A          251 YGSGNPAP--WNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGIL  328 (571)
T ss_dssp             EECCCCSC--SCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEE
T ss_pred             EECCCCcc--ccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEE
Confidence            77654321  11110000  0  1277888888887766542  211    1111   22234774   57788899999


Q ss_pred             EEEECCCCcccc
Q psy10063        598 ISNTLSNGLDIS  609 (894)
Q Consensus       598 ~vwdl~~~~~~~  609 (894)
                      +++|.++++.+.
T Consensus       329 ~~lD~~tG~~~w  340 (571)
T 2ad6_A          329 YTLNRENGNLIV  340 (571)
T ss_dssp             EEEETTTCCEEE
T ss_pred             EEEECCCCCEEe
Confidence            999999887653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.58  E-value=2.1e-06  Score=88.24  Aligned_cols=154  Identities=13%  Similarity=0.125  Sum_probs=107.4

Q ss_pred             CCEEEEEEccCCCEEEEecCCC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        410 AKITSLLWGNLDQYIITGHAKG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .....|.|+ ++.++++.+.+|  .|+++|+++|+.++.+.....                          +....+.++
T Consensus        43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~--------------------------~FgeGit~~   95 (262)
T 3nol_A           43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR--------------------------YFGEGISDW   95 (262)
T ss_dssp             CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT--------------------------CCEEEEEEE
T ss_pred             cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc--------------------------cceeEEEEe
Confidence            446999999 777677777766  899999999999888865432                          222112223


Q ss_pred             CCEEEEE-ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE
Q psy10063        488 ATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF  566 (894)
Q Consensus       488 g~~L~sg-s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~  566 (894)
                      +..|+.. -.++.+.+||.++++++..+.....-  ..+++|+++|+++.+.+.              |.++|..+.+.+
T Consensus        96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG--~glt~dg~~L~~SdGs~~--------------i~~iDp~T~~v~  159 (262)
T 3nol_A           96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG--WGLTHNDQYLIMSDGTPV--------------LRFLDPESLTPV  159 (262)
T ss_dssp             TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC--CCEEECSSCEEECCSSSE--------------EEEECTTTCSEE
T ss_pred             CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc--eEEecCCCEEEEECCCCe--------------EEEEcCCCCeEE
Confidence            4444444 35789999999999999999875432  344467888887765543              788898888888


Q ss_pred             EEccCC--C---CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        567 ARIKGH--F---GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       567 ~~l~~h--~---~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                      ..+.-.  .   ..+..|.|. +|+.++..-.+..|.+.|.++++.
T Consensus       160 ~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V  204 (262)
T 3nol_A          160 RTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV  204 (262)
T ss_dssp             EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE
T ss_pred             EEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE
Confidence            776432  1   334567776 776555555678899999988873

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.58  E-value=3.8e-05  Score=80.39  Aligned_cols=180  Identities=8%  Similarity=-0.004  Sum_probs=116.0

Q ss_pred             CCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC-Cc-----------
Q psy10063        410 AKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ-AV-----------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~-~i-----------  476 (894)
                      ..+.+++|+++++.|+.+ ...+.|.++++..+.....+..... ....|++++++..|.++.... .+           
T Consensus        36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~  114 (267)
T 1npe_A           36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR  114 (267)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC-CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence            457899999977666554 4567899999886654444433323 788999999876666554321 11           


Q ss_pred             -------cceEEEEEecCCCEEEEEEC---CCCEEEEEcCCCcEEEEEe-C-CCCeeEEEEcCCCCEEEEEECCCCeEEE
Q psy10063        477 -------EPINDMQFSKDATMFITASK---DHTAKLFTTHDRQLLKTYT-T-ERPVNSAALSPILPHVVLGGGQEAREVT  544 (894)
Q Consensus       477 -------~~V~~l~~spdg~~L~sgs~---Dg~V~iwdl~~~~~~~~~~-~-~~~v~~l~~spdg~~l~~~~~~~~~~v~  544 (894)
                             .....|+++|++.+|+.+..   .+.|.++++.. +....+. . ......++|++++.+|+++......   
T Consensus       115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~---  190 (267)
T 1npe_A          115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR---  190 (267)
T ss_dssp             EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE---
T ss_pred             EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE---
Confidence                   35678899997666666554   36788888753 3333332 2 3567899999999988888766542   


Q ss_pred             eccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCcc
Q psy10063        545 TTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLD  607 (894)
Q Consensus       545 ~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~  607 (894)
                                |.++|+........+.+ ......|++.  +.+|+.+. ..+.|.+++.+.++.
T Consensus       191 ----------I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~  241 (267)
T 1npe_A          191 ----------AECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE  241 (267)
T ss_dssp             ----------EEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE
T ss_pred             ----------EEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc
Confidence                      66777664433333332 2334567664  44555554 567899999987653

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.57  E-value=8.6e-05  Score=86.98  Aligned_cols=78  Identities=12%  Similarity=0.066  Sum_probs=53.8

Q ss_pred             CCCcEEEEEccCCceeeccccCCC--ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCee-EEEEeeC
Q psy10063        780 ADKVSERYRDRKNKATAGFLLSCP--DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPIN-SLAFHPD  856 (894)
Q Consensus       780 ~Dg~I~iwd~~~~~~~~~~~~~~~--~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~-~l~fSpd  856 (894)
                      .+|.|+.||+.+++.+.++.....  ...+...+..++++..++    .|+.||.++|+++.+++...+.+. -+.|..|
T Consensus       464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg----~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~  539 (582)
T 1flg_A          464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDG----YFKAFDAKSGKELWKFQTGSGIVSPPITWEQD  539 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTS----EEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred             CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCC----cEEEEECCCCCEEEEecCCCCcccCceEEEEC
Confidence            467889999988888766554332  223444567777776665    699999999999988875443322 3677889


Q ss_pred             CcEEE
Q psy10063        857 GKSYA  861 (894)
Q Consensus       857 g~~La  861 (894)
                      |+.++
T Consensus       540 G~qYv  544 (582)
T 1flg_A          540 GEQYL  544 (582)
T ss_dssp             TEEEE
T ss_pred             CEEEE
Confidence            97443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.55  E-value=7.2e-06  Score=99.60  Aligned_cols=145  Identities=8%  Similarity=0.006  Sum_probs=85.5

Q ss_pred             CEEEEEEc-cCCCEEEEecC-C----CcEEEEecCCC-eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        411 KITSLLWG-NLDQYIITGHA-K----GDICTWDLRMG-RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       411 ~V~~l~~s-pdg~~L~sgs~-D----g~I~iWd~~tg-~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.+++|| |||++||.+.. +    ..|+|+|+.+| +.+.   .    .+..                    ....++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---~----~~~~--------------------~~~~~~  227 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA---D----KVSG--------------------TNGEIV  227 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC---C----CEEE--------------------ECSCCE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC---c----cccC--------------------ceeeEE
Confidence            67889999 99998886532 2    35999999988 6321   0    0100                    112345


Q ss_pred             EecCCCEEEEEECC-----CCEEEEEcCCCcE--EEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        484 FSKDATMFITASKD-----HTAKLFTTHDRQL--LKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       484 ~spdg~~L~sgs~D-----g~V~iwdl~~~~~--~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      |+|||+.|+....|     ..|++|++.+++.  ...+..  ......+.|+|||++|++......           ..+
T Consensus       228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----------~~~  296 (751)
T 2xe4_A          228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE-----------TAE  296 (751)
T ss_dssp             ECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS-----------CEE
T ss_pred             EecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCC-----------Cce
Confidence            55665555554443     2577888877642  233332  344678899999999988765432           224


Q ss_pred             EEEEeccccc-eE--EEc-cCCCCCeEEEEEecCCCEEEEEeC
Q psy10063        555 ARFYHLIFEE-EF--ARI-KGHFGPINSLAFHPDGKSYASGGE  593 (894)
Q Consensus       555 v~vwd~~~~~-~~--~~l-~~h~~~V~~l~~spdg~~l~sgs~  593 (894)
                      |+++|+..+. ..  ..+ .+.....+++.|+.++.+++....
T Consensus       297 l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~  339 (751)
T 2xe4_A          297 VHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNE  339 (751)
T ss_dssp             EEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECT
T ss_pred             EEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCC
Confidence            7888887652 22  333 334455566666543333344333

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.55  E-value=1.2e-05  Score=86.88  Aligned_cols=112  Identities=11%  Similarity=-0.040  Sum_probs=67.9

Q ss_pred             EEEeeCCCCCEEEEe-cCCCcEEEEEccCCc-----eeeccccCCCceEeecCCCeEEEEecCCC------CceeEEEee
Q psy10063        764 FKMPEPPKREKLALA-LADKVSERYRDRKNK-----ATAGFLLSCPDFLFDFDTTREVTTTSTKV------GKFDARFYH  831 (894)
Q Consensus       764 ~~la~spdg~~Latg-s~Dg~I~iwd~~~~~-----~~~~~~~~~~~~~fS~dg~~l~~as~d~~------g~~~I~vwd  831 (894)
                      ..|++++++++|+++ ...+.|++|++....     .+... .+...+++.++|...++......      ....|.++|
T Consensus       188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d  266 (322)
T 2fp8_A          188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-PNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD  266 (322)
T ss_dssp             CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-SSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred             cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC-CCCCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence            457888998866554 556788888876421     11111 12445778888875554433100      011478888


Q ss_pred             cCCcceeeeccCC----CCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        832 LIFEEEFARIKGH----FGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       832 ~~tg~~l~~l~gH----~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      .+ |+.+..+...    ...+.++++ .+++++++....+.|.+++++...
T Consensus       267 ~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~  315 (322)
T 2fp8_A          267 EF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG  315 (322)
T ss_dssp             TT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred             CC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence            75 7777666543    345777777 577777777778889999987554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.55  E-value=4.4e-06  Score=86.92  Aligned_cols=113  Identities=7%  Similarity=0.041  Sum_probs=79.1

Q ss_pred             eEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        479 INDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      ...|+|++|+.++++.+.  ++.|+++|+.+++.+..+..........+..+|++|+.+......             +.
T Consensus        23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~-------------v~   89 (266)
T 2iwa_A           23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNI-------------GF   89 (266)
T ss_dssp             EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSE-------------EE
T ss_pred             cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCE-------------EE
Confidence            567888887654444443  578999999999999998765433333344447788888766553             88


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ++|..+++.+..+..-...  .+.+++||++|+.+..++.|.++|.++.+
T Consensus        90 viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~  137 (266)
T 2iwa_A           90 IYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFK  137 (266)
T ss_dssp             EEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred             EEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCc
Confidence            9999999998887532122  23355688877777778889999886643

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.49  E-value=0.0018  Score=76.22  Aligned_cols=364  Identities=11%  Similarity=0.021  Sum_probs=170.9

Q ss_pred             ceEEEEEecCCCEEEEE-ECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sg-s~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      ....|++...+..|+.+ ...+.|.+.++........+. .-.....|++.|.+.+|+.......-.            |
T Consensus        85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~------------I  152 (619)
T 3s94_A           85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK------------I  152 (619)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCE------------E
T ss_pred             CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCE------------E
Confidence            67889999866655554 456889999987554433332 335688999999888887776432211            4


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCcccc----CCCceeeeEECcCCcEEEe-c
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGLDIS----EGSFTSSSTQQPDGLVYPS-Q  629 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~~~~----~~~~v~~~~~spdg~~l~~-~  629 (894)
                      ...++........+.........|+++++++.|+.+. ..+.|..++++......    .......+++..+..++.. .
T Consensus       153 ~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~  232 (619)
T 3s94_A          153 ERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWS  232 (619)
T ss_dssp             EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTT
T ss_pred             EEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCC
Confidence            4444442222222223445678999999777666654 45678888887644221    1122234444444222221 1


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCC-eEEeeccCCcceeEeccCcceeEEee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGT-RLHVNPFDEQQSVELTKDEQIEMARN  708 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~s~~~~~~~~~~  708 (894)
                      .+.+..+......  . ...+.........|.++....+......+.....+. .+++......               .
T Consensus       233 ~~~V~~~d~~tg~--~-~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~---------------~  294 (619)
T 3s94_A          233 THSILACNKYTGE--G-LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKP---------------F  294 (619)
T ss_dssp             TCSEEEEESSSCC--C-CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTT---------------S
T ss_pred             CCEEEEEECCCCc--c-cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCC---------------C
Confidence            2233333322111  0 111111111223344433211110000000000000 0111000000               0


Q ss_pred             eEEEcCCCCEEEecccCcccccc-CCcceeeccccC-cccccCCCCcc--ee-cCCCCceEEEeeCCCCCEEE-EecCCC
Q psy10063        709 RMSINHSGTRLHVNPFDEQQSVD-ASPLMTWGHIEG-TPFKLDGSDTP--IL-AGPVDIGFKMPEPPKREKLA-LALADK  782 (894)
Q Consensus       709 ~~~~s~~g~~l~v~~~~~~~~~~-~~~l~~~~~~~g-~~~~~dg~~~~--~~-~~h~~~v~~la~spdg~~La-tgs~Dg  782 (894)
                      ..+..+.|..+..   +...+.. ...+.++..... ..+.++.....  .+ ......+..|+|.+.+..|. +-...+
T Consensus       295 ~~C~C~~g~~l~~---d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~  371 (619)
T 3s94_A          295 YQCACPTGVKLLE---NGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVR  371 (619)
T ss_dssp             EEEECCTTCCBCT---TSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred             ceEeCCchheecc---cCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCC
Confidence            0111122221110   1111111 111111111110 11112222111  11 12234577899988655555 445577


Q ss_pred             cEEEEEccCCce--eec-cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeec-cCCCCCeeEEEEeeC-C
Q psy10063        783 VSERYRDRKNKA--TAG-FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARI-KGHFGPINSLAFHPD-G  857 (894)
Q Consensus       783 ~I~iwd~~~~~~--~~~-~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l-~gH~~~V~~l~fSpd-g  857 (894)
                      .|+.++......  +.. -......+++.+.+..|+.+.....   .|.+.++.... ...+ ........+|++.|. |
T Consensus       372 ~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~---~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G  447 (619)
T 3s94_A          372 AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTD---RIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVG  447 (619)
T ss_dssp             EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT---EEEEEETTSCS-CEEEECTTCCSEEEEEEETTTT
T ss_pred             eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCC---cEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCC
Confidence            888888765322  221 1234557888887887777754432   68999987543 3333 334567889999997 5


Q ss_pred             cEEEEe-cCCCcEEEEecCccc
Q psy10063        858 KSYASG-GEDGFVRLHTFDQAY  878 (894)
Q Consensus       858 ~~LaS~-s~Dg~V~vWdl~~~~  878 (894)
                      .++++- +..+.|...++++..
T Consensus       448 ~ly~tD~g~~~~I~r~~~dG~~  469 (619)
T 3s94_A          448 YMYWTDWGEIPKIERAALDGSD  469 (619)
T ss_dssp             EEEEEECSSSCEEEEEETTSCS
T ss_pred             cEEEecCCCCCEEEEEccCCCc
Confidence            444443 334566666666543

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.45  E-value=1.3e-05  Score=82.47  Aligned_cols=155  Identities=11%  Similarity=0.017  Sum_probs=107.8

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      ......|.|+ ++.++++.+.+|.|+++|+++|+.++.+ ....  ..                      -..+++.. +
T Consensus        54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~--~F----------------------geGit~~g-~  106 (268)
T 3nok_A           54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN--IF----------------------AEGLASDG-E  106 (268)
T ss_dssp             TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT--CC----------------------EEEEEECS-S
T ss_pred             ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC--cc----------------------eeEEEEeC-C
Confidence            3556899997 4567777888899999999999988777 3221  11                      11233322 2


Q ss_pred             CEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        489 TMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      ++.+..-.++.+.+||.++++++..+.....-..++  +|+++|+++.+.+.              |.++|.++.+.+..
T Consensus       107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~--------------l~~iDp~T~~v~~~  170 (268)
T 3nok_A          107 RLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTM--------------LTFHEPDGFALVGA  170 (268)
T ss_dssp             CEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSE--------------EEEECTTTCCEEEE
T ss_pred             EEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCE--------------EEEEcCCCCeEEEE
Confidence            333444467899999999999999998754334444  57888888876554              88899888888877


Q ss_pred             ccCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc
Q psy10063        569 IKGHF-----GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       569 l~~h~-----~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~  607 (894)
                      +.-..     ..+..|.|. +|+.++..-.+..|.+.|.++++.
T Consensus       171 I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V  213 (268)
T 3nok_A          171 VQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTV  213 (268)
T ss_dssp             EECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred             EEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence            64321     245677887 776555554678899999988863

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.44  E-value=6.7e-05  Score=76.43  Aligned_cols=176  Identities=10%  Similarity=0.034  Sum_probs=116.8

Q ss_pred             CCCCEEEEEEccCCCEEEEecCC--CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAK--GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~D--g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      ....+..|.|+. +.++.+.+.+  ..|+++|+++|+.++.+.....  +.                      -..+++.
T Consensus        19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~--~f----------------------geGi~~~   73 (243)
T 3mbr_X           19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP--YF----------------------GAGIVAW   73 (243)
T ss_dssp             TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT--CC----------------------EEEEEEE
T ss_pred             CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC--cc----------------------eeEEEEe
Confidence            346688999986 5566666665  4899999999999988865432  11                      1122222


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE  565 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~  565 (894)
                       ++++.+..-.++.+.+||.++++++..+.....-..|+  +++++|+++.+.+.              |.++|.++.+.
T Consensus        74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~--------------l~~iDp~t~~~  136 (243)
T 3mbr_X           74 -RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAV--------------IRKLDPDTLQQ  136 (243)
T ss_dssp             -TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSE--------------EEEECTTTCCE
T ss_pred             -CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCe--------------EEEEeCCCCeE
Confidence             22333344467899999999999999998754334444  57788888766554              88889888888


Q ss_pred             EEEccCCC-----CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcccc-----------------CCCceeeeEECcCC
Q psy10063        566 FARIKGHF-----GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS-----------------EGSFTSSSTQQPDG  623 (894)
Q Consensus       566 ~~~l~~h~-----~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~-----------------~~~~v~~~~~spdg  623 (894)
                      ++.+.-..     ..+..|.|. +|+.++..-.+..|.+.|.++++.+.                 .......+++.|++
T Consensus       137 ~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~  215 (243)
T 3mbr_X          137 VGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH  215 (243)
T ss_dssp             EEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred             EEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence            77764321     345567765 66655555467789999988876321                 12244567777766


Q ss_pred             cEE
Q psy10063        624 LVY  626 (894)
Q Consensus       624 ~~l  626 (894)
                      ..+
T Consensus       216 ~~l  218 (243)
T 3mbr_X          216 DRL  218 (243)
T ss_dssp             TEE
T ss_pred             CEE
Confidence            555

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.44  E-value=3.6e-05  Score=83.09  Aligned_cols=181  Identities=10%  Similarity=0.055  Sum_probs=110.5

Q ss_pred             EecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCC--------------------CCCCeeEEEEcC-C
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGH--------------------AKEPINDMQFSK-D  463 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h--------------------~~~~V~~v~~sp-d  463 (894)
                      +.+.-....+++|+++|++|+++..++.|..||...++.. .+...                    .. .+..|++.+ +
T Consensus        14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~-~p~gi~~~~~~   91 (322)
T 2fp8_A           14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCG-RTYDISYNLQN   91 (322)
T ss_dssp             EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHC-CEEEEEEETTT
T ss_pred             cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCC-CCceEEEcCCC
Confidence            4444455677888888887888888888988988765432 22110                    12 567888887 5


Q ss_pred             CCEEEEEeCCCCc----------------------cceEEEEEec-CCCEEEEEEC-----------------CCCEEEE
Q psy10063        464 ATMFITASHSQAV----------------------EPINDMQFSK-DATMFITASK-----------------DHTAKLF  503 (894)
Q Consensus       464 g~~la~~~~d~~i----------------------~~V~~l~~sp-dg~~L~sgs~-----------------Dg~V~iw  503 (894)
                      |++++ +.....+                      .....|++.+ +|.+.++...                 ++.|..|
T Consensus        92 g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~  170 (322)
T 2fp8_A           92 NQLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY  170 (322)
T ss_dssp             TEEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred             CcEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence            54433 3221111                      1356788888 8876665432                 3668888


Q ss_pred             EcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC-CCeEEEeccCccceeeEEEEeccccc--eEEEccCCCCCeEEEE
Q psy10063        504 TTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFEE--EFARIKGHFGPINSLA  580 (894)
Q Consensus       504 dl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~~--~~~~l~~h~~~V~~l~  580 (894)
                      |...++.......-.....|+|+++|++|+++... +.              |++|++....  ....+....+ ...|+
T Consensus       171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~--------------I~~~~~~~~~~~~~~~~~~~~g-P~gi~  235 (322)
T 2fp8_A          171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQ--------------IVKYWLEGPKKGTAEVLVKIPN-PGNIK  235 (322)
T ss_dssp             ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTE--------------EEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred             eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCe--------------EEEEECCCCcCCccceEEeCCC-CCCeE
Confidence            88777655443333456789999999988877554 33              5556554311  1111111123 67899


Q ss_pred             EecCCCEEEEEeC----------CCcEEEEECC
Q psy10063        581 FHPDGKSYASGGE----------DGFLISNTLS  603 (894)
Q Consensus       581 ~spdg~~l~sgs~----------Dg~I~vwdl~  603 (894)
                      ++++|.++++...          .+.|.+++.+
T Consensus       236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~  268 (322)
T 2fp8_A          236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF  268 (322)
T ss_dssp             ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred             ECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence            9999987666544          3456666653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.42  E-value=1.3e-05  Score=82.34  Aligned_cols=112  Identities=4%  Similarity=-0.069  Sum_probs=83.3

Q ss_pred             ceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      ....|.|+ ++.++++.+.+|  .|+++|+++++.+..+..........+.+++.+|+........             +
T Consensus        44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~-------------v  109 (262)
T 3nol_A           44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGL-------------G  109 (262)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE-------------E
T ss_pred             ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCE-------------E
Confidence            35778888 676677777766  8999999999999999877666665555567788888765543             8


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .+||.++++.+..+.... .-+.|+  +|++.|+....++.|.++|.++.+
T Consensus       110 ~v~D~~t~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~  157 (262)
T 3nol_A          110 FVWNIRNLRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLT  157 (262)
T ss_dssp             EEEETTTCCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCS
T ss_pred             EEEECccCcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCe
Confidence            899999999999886432 223444  577777776667789999887654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.38  E-value=0.00026  Score=75.71  Aligned_cols=59  Identities=19%  Similarity=0.135  Sum_probs=42.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                      ....++|+++|+++++....+.|+.||... +....+.....+.+|++.++|+++++...
T Consensus        33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~   91 (306)
T 2p4o_A           33 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWN   91 (306)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEEC
T ss_pred             CcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEecc
Confidence            466788888888666665778888888764 45555555667899999999996555443

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.37  E-value=9.5e-06  Score=96.99  Aligned_cols=120  Identities=9%  Similarity=0.069  Sum_probs=71.9

Q ss_pred             EEEEcc-CCCEEEEecCCC-----------cEEEEecCCCeEE--EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        414 SLLWGN-LDQYIITGHAKG-----------DICTWDLRMGREL--ESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       414 ~l~~sp-dg~~L~sgs~Dg-----------~I~iWd~~tg~~~--~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ++++.+ +|++++.|+.+.           .+.+||+.+++..  ..+.....                        ...
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~------------------------~~~  245 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD------------------------MFC  245 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC------------------------CSS
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC------------------------Ccc
Confidence            556677 888888887543           5788888876532  22211111                        022


Q ss_pred             EEEEEecCCCEEEEEEC-CCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEEC-CCCeEEEeccCccceeeE
Q psy10063        480 NDMQFSKDATMFITASK-DHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGG-QEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~-~~~~~v~~~~~~~~~~~v  555 (894)
                      .++++..+|++++.|+. +..+++||..+.+....-..  ...-.++++.++|+.+++|+. ++..         ...++
T Consensus       246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~---------~~~~~  316 (656)
T 1k3i_A          246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV---------FEKNG  316 (656)
T ss_dssp             CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS---------CCCCE
T ss_pred             ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc---------ccccc
Confidence            34556677777777763 45799999987765443222  222345677789998888883 3321         11237


Q ss_pred             EEEeccccceE
Q psy10063        556 RFYHLIFEEEF  566 (894)
Q Consensus       556 ~vwd~~~~~~~  566 (894)
                      .+||....+..
T Consensus       317 e~yd~~t~~W~  327 (656)
T 1k3i_A          317 EVYSPSSKTWT  327 (656)
T ss_dssp             EEEETTTTEEE
T ss_pred             eEeCCCCCcce
Confidence            78887766543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.32  E-value=0.00017  Score=74.44  Aligned_cols=183  Identities=13%  Similarity=0.198  Sum_probs=119.8

Q ss_pred             EEecCCCCEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC---------
Q psy10063        404 QVTDQSAKITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS---------  473 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d---------  473 (894)
                      .+.|-.+.+..|+|+|+++.|+ +...++.|...|+. |+.++.+..........|++.+++.++++.-.+         
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            4556667899999999877555 46678889999988 888888753322267888888887765542221         


Q ss_pred             --CCc----------------cceEEEEEecCCCEEEEEECCCCEEEEEcC---CCcEEEEEeC--------CCCeeEEE
Q psy10063        474 --QAV----------------EPINDMQFSKDATMFITASKDHTAKLFTTH---DRQLLKTYTT--------ERPVNSAA  524 (894)
Q Consensus       474 --~~i----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~---~~~~~~~~~~--------~~~v~~l~  524 (894)
                        +.+                .....|+|+|+++.|+++.+.....||.+.   ....+..+..        -..+.+++
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence              211                234789999998878777766666666654   1222233321        23678999


Q ss_pred             EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCC---------CCCeEEEEEecCCCEEEEEeCCC
Q psy10063        525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGH---------FGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h---------~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      +.|...+|++.+.....             |.++|.. |+.+..+.-.         ...-..|+|.++|.++++ ++..
T Consensus       180 ~dp~tg~lliLS~~s~~-------------L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n  244 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRA-------------LQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN  244 (255)
T ss_dssp             EETTTTEEEEEETTTTE-------------EEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred             EcCCCCeEEEEECCCCe-------------EEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence            99998888888877754             5555644 3333332211         125689999999984444 6766


Q ss_pred             cEEEEEC
Q psy10063        596 FLISNTL  602 (894)
Q Consensus       596 ~I~vwdl  602 (894)
                      .+++|.-
T Consensus       245 ~~y~f~~  251 (255)
T 3qqz_A          245 RFYRFTP  251 (255)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEEe
Confidence            6666643

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.27  E-value=4.6e-05  Score=81.92  Aligned_cols=104  Identities=15%  Similarity=0.022  Sum_probs=65.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .+.++.+.++|.+++ ++  +.|..|| .+++.+..+.. ...+.++++.++|. |++++.++.              |.
T Consensus       178 ~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~g--------------l~  238 (330)
T 3hxj_A          178 ITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGH--------------LY  238 (330)
T ss_dssp             CCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTE--------------EE
T ss_pred             ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCe--------------EE
Confidence            344555656666444 44  7899999 77777766654 35688888888875 555665555              44


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      .+|. .++.+..+......+.++.+..++ .|+.++.+|.|..+|.
T Consensus       239 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          239 AINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP  282 (330)
T ss_dssp             EECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred             EECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence            4442 344444444333444456665555 4667788888999986

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.22  E-value=3.5e-05  Score=79.20  Aligned_cols=111  Identities=8%  Similarity=-0.074  Sum_probs=81.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      ....|.|+ ++.++++.+.+|.|+++|+++++.++.+ .........+.+++.+|+........             +.+
T Consensus        56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~-------------v~V  120 (268)
T 3nok_A           56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGL-------------LFT  120 (268)
T ss_dssp             CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCE-------------EEE
T ss_pred             ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCE-------------EEE
Confidence            35677776 4566777788889999999999999888 66555554444566777777655543             899


Q ss_pred             EeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        558 YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ||.++++.+..+... ..-+.|+  +|++.|+.+..++.|+++|.++.+
T Consensus       121 ~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~  166 (268)
T 3nok_A          121 WSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA  166 (268)
T ss_dssp             EETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCC
T ss_pred             EECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCe
Confidence            999999999988643 2224554  467888877778899999987654

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.21  E-value=0.00081  Score=74.50  Aligned_cols=107  Identities=7%  Similarity=-0.098  Sum_probs=64.4

Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      |.+..+ ..+|+.+ ....|+.+++........+.....+..++|++.+..|+........             |+.+++
T Consensus        81 C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~-------------I~r~~~  145 (386)
T 3v65_B           81 CKALGP-EPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDR-------------ILRANL  145 (386)
T ss_dssp             EEECSS-CCEEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTE-------------EEEEET
T ss_pred             ECCccc-cceeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCc-------------EEEEec
Confidence            334344 2344433 4467888898877766666666778999999988888887765542             667777


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEEC
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTL  602 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl  602 (894)
                      ..+.....+.........|++++.+..|+... ..+.|.++++
T Consensus       146 ~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~  188 (386)
T 3v65_B          146 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL  188 (386)
T ss_dssp             TSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBT
T ss_pred             CCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeC
Confidence            65443333332333456677776555444333 3444555444

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.19  E-value=3.6e-05  Score=93.42  Aligned_cols=111  Identities=14%  Similarity=0.091  Sum_probs=63.8

Q ss_pred             eEEEeeCCCCCEEEEecC---CCcEEEEEccCCc-ee--eccccCCCceEeecC---CCeEEEEecCC-CCceeEEEeec
Q psy10063        763 GFKMPEPPKREKLALALA---DKVSERYRDRKNK-AT--AGFLLSCPDFLFDFD---TTREVTTTSTK-VGKFDARFYHL  832 (894)
Q Consensus       763 v~~la~spdg~~Latgs~---Dg~I~iwd~~~~~-~~--~~~~~~~~~~~fS~d---g~~l~~as~d~-~g~~~I~vwd~  832 (894)
                      ...+.|+|||++|+..+.   ...|+++|+.... ..  ..+........|+++   |..++..+... .+.+.|+++++
T Consensus       273 ~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~  352 (751)
T 2xe4_A          273 SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPR  352 (751)
T ss_dssp             EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEET
T ss_pred             EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC
Confidence            346778888888876553   3357788877642 12  223222334456565   88877776654 45667889998


Q ss_pred             CCcceeee-ccCCCC--CeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        833 IFEEEFAR-IKGHFG--PINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       833 ~tg~~l~~-l~gH~~--~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      ..+..... +..|..  .+..+.+. .+.++++...||..+||-+
T Consensus       353 ~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~  396 (751)
T 2xe4_A          353 GQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTM  396 (751)
T ss_dssp             TSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred             CCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence            75322233 333443  34445544 2345566777786555543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.17  E-value=0.0002  Score=80.54  Aligned_cols=128  Identities=6%  Similarity=-0.013  Sum_probs=90.5

Q ss_pred             CEEEEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC-Cc------------
Q psy10063        411 KITSLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ-AV------------  476 (894)
Q Consensus       411 ~V~~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~-~i------------  476 (894)
                      ....|+|+| ++..|+.+...+.|+++|+..++....+. ... ....|+|+++|++|+++...+ .+            
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence            457899998 46667776655789999998777554444 333 789999999999766665421 11            


Q ss_pred             ----------cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        477 ----------EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       477 ----------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                                ....+++++| +|.++++-...+.|+.|+...+.....+..  ......|+|+|+|++|+++.....
T Consensus       216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~  292 (430)
T 3tc9_A          216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH  292 (430)
T ss_dssp             SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred             eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence                      2345678899 677666666778899999987765343333  245789999999998887765543

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.16  E-value=0.00017  Score=73.34  Aligned_cols=112  Identities=8%  Similarity=0.022  Sum_probs=82.5

Q ss_pred             ceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      ....|.|+. +.++.+.+.+|  .|+++|+++++.++.+..........+..++.+|+........             +
T Consensus        22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~-------------v   87 (243)
T 3mbr_X           22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE-------------G   87 (243)
T ss_dssp             CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE-------------E
T ss_pred             ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE-------------E
Confidence            466788875 55666666654  8999999999999999877666655555567788877755543             8


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      .+||..+.+.+..+.... .-+.|+  +|++.|+.+..++.|.++|.++.+
T Consensus        88 ~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~  135 (243)
T 3mbr_X           88 FVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ  135 (243)
T ss_dssp             EEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCC
T ss_pred             EEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCe
Confidence            899999999999886432 224554  467777777778889999987654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.15  E-value=0.0032  Score=68.54  Aligned_cols=109  Identities=7%  Similarity=-0.082  Sum_probs=66.4

Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      .|.+..+++ +|+.+ ....|+..++........+.....+..++|++.+..|+........             |+.++
T Consensus        37 ~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~-------------I~r~~  101 (349)
T 3v64_C           37 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDR-------------ILRAN  101 (349)
T ss_dssp             CEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTE-------------EEEEE
T ss_pred             cccccccCc-eeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCc-------------eEEEe
Confidence            344444433 34433 3456888888766665555556678999999988888887765542             66777


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS  603 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~  603 (894)
                      +..+.....+.........|++++.+..|+.. ...+.|.+++++
T Consensus       102 ~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d  146 (349)
T 3v64_C          102 LNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD  146 (349)
T ss_dssp             TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             cCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence            76554333333333455778888755555443 345566666654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.13  E-value=0.00093  Score=71.31  Aligned_cols=196  Identities=10%  Similarity=0.057  Sum_probs=111.6

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC--c-------cce-
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA--V-------EPI-  479 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~--i-------~~V-  479 (894)
                      ....+++|+++|+++++-..++.|.+||... +....+.. .. .+..|+|.++|+++++......  +       +.+ 
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~-~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EG-KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SS-EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CC-CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            5677888988888766666778888888764 43333332 22 6788888888885554432111  1       111 


Q ss_pred             -----------EEEEEecCCCEEEEEECCCCEEEEEcCCCcE-EEEEe-------C-C--CCeeEEEEcCCCCEEEEEEC
Q psy10063        480 -----------NDMQFSKDATMFITASKDHTAKLFTTHDRQL-LKTYT-------T-E--RPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       480 -----------~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~-~~~~~-------~-~--~~v~~l~~spdg~~l~~~~~  537 (894)
                                 ..+++.+++..+++...++.|+++|...++. +....       . .  .....|  ++++++|+++..
T Consensus       109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~  186 (306)
T 2p4o_A          109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT  186 (306)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred             EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence                       1122223333344433578888888775532 11111       0 1  123445  888988888776


Q ss_pred             CCCeEEEeccCccceeeEEEEeccc-cce--EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-c---cC
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIF-EEE--FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-I---SE  610 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~-~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-~---~~  610 (894)
                      ....             |.+|++.. ++.  ...+. .......|+++++|+++++....+.|.+|+.+.... +   ..
T Consensus       187 ~~~~-------------I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~  252 (306)
T 2p4o_A          187 EKML-------------LLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQ  252 (306)
T ss_dssp             TTTE-------------EEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGG
T ss_pred             CCCE-------------EEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeeccc
Confidence            5542             56666543 221  11111 113456789999998777777778899998763221 1   11


Q ss_pred             -CCceeeeEEC---cCCc
Q psy10063        611 -GSFTSSSTQQ---PDGL  624 (894)
Q Consensus       611 -~~~v~~~~~s---pdg~  624 (894)
                       .....+++|.   +++.
T Consensus       253 ~~~~p~~~a~~g~~~d~~  270 (306)
T 2p4o_A          253 GVIGSTAVAFGQTEGDCT  270 (306)
T ss_dssp             TCTTEEEEEECCSTTTTT
T ss_pred             ccCCceEEEEecccCCCC
Confidence             2455666776   5543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.12  E-value=0.0015  Score=72.41  Aligned_cols=182  Identities=8%  Similarity=-0.094  Sum_probs=113.3

Q ss_pred             CCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC----------CCCc-
Q psy10063        409 SAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------SQAV-  476 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~----------d~~i-  476 (894)
                      ...+.+|+|.+.++.|+.. ...+.|+.|++..+.....+..... ....|++.+.+..|.....          ++.. 
T Consensus       115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~  193 (386)
T 3v65_B          115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR  193 (386)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS-CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred             CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC-CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence            4568899999866655544 4567899999886654444443333 5667888876555544432          2211 


Q ss_pred             --------cceEEEEEecCCCEEEEEEC-C-CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        477 --------EPINDMQFSKDATMFITASK-D-HTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       477 --------~~V~~l~~spdg~~L~sgs~-D-g~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                              .....|++.|.+.+|+.... . +.|..+++........+.. -.....|+|++++.+|+++......    
T Consensus       194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~----  269 (386)
T 3v65_B          194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV----  269 (386)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE----
T ss_pred             EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE----
Confidence                    35678899987666665543 3 5677778764433333332 3467899999999999888766542    


Q ss_pred             ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        546 TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                               |..+++........+.........|++ .++.++++-...+.|..++...+
T Consensus       270 ---------I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G  319 (386)
T 3v65_B          270 ---------IERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG  319 (386)
T ss_dssp             ---------EEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred             ---------EEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence                     667776543333333333456678888 34445555556677887775444

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.10  E-value=0.00044  Score=77.81  Aligned_cols=177  Identities=7%  Similarity=-0.034  Sum_probs=111.3

Q ss_pred             CCEEEEEEccC--CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC------c-----
Q psy10063        410 AKITSLLWGNL--DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA------V-----  476 (894)
Q Consensus       410 ~~V~~l~~spd--g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~------i-----  476 (894)
                      ....+|+|+|+  +..|+.+...+.|+++|+..++....+. ... ....|+|+++|+ |+++...+.      +     
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~-~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~  215 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIG-QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA  215 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCS-CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCC-CccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence            34678999995  4556666544889999998887655443 333 689999999999 444443210      0     


Q ss_pred             ------------cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEE-EEEeC--CCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        477 ------------EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLL-KTYTT--ERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       477 ------------~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~-~~~~~--~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                                  .....+++++ +|.++++-..++.|+.+|...++.. ..+..  ......|+|+|+|++|+++.....
T Consensus       216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~  295 (433)
T 4hw6_A          216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH  295 (433)
T ss_dssp             GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred             CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence                        1235578888 6666656556788999998878763 33332  223457999999998888776543


Q ss_pred             eEEEeccCccceeeEEEEecc--ccce--EEEccC---------------CCCCeEEEEE---------ecCCCEEEEEe
Q psy10063        541 REVTTTSTKVGKFDARFYHLI--FEEE--FARIKG---------------HFGPINSLAF---------HPDGKSYASGG  592 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~--~~~~--~~~l~~---------------h~~~V~~l~~---------spdg~~l~sgs  592 (894)
                      .             |+.+++.  .+..  ...+.+               .......|++         ..+|.++++-.
T Consensus       296 ~-------------I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~  362 (433)
T 4hw6_A          296 C-------------IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR  362 (433)
T ss_dssp             E-------------EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred             E-------------EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence            2             4443332  1110  011111               1234677888         66676666655


Q ss_pred             CCCcEEEEEC
Q psy10063        593 EDGFLISNTL  602 (894)
Q Consensus       593 ~Dg~I~vwdl  602 (894)
                      ..+.|++++.
T Consensus       363 ~n~~I~~~~~  372 (433)
T 4hw6_A          363 DSHTVRVLTP  372 (433)
T ss_dssp             TTTEEEEECT
T ss_pred             CCCEEEEECC
Confidence            6677888875

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.10  E-value=0.0039  Score=66.80  Aligned_cols=99  Identities=9%  Similarity=-0.078  Sum_probs=61.2

Q ss_pred             EEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc----cceE
Q psy10063        491 FITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF----EEEF  566 (894)
Q Consensus       491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~----~~~~  566 (894)
                      |+.+ ....|+..|+...+....+.....+.+++|++++..|+.+......             |..+++..    ....
T Consensus         4 ll~~-~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~-------------I~~~~~~g~~~~~~~~   69 (316)
T 1ijq_A            4 LFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-------------ICSTQLDRAHGVSSYD   69 (316)
T ss_dssp             EEEE-CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTE-------------EEEEEC--------CE
T ss_pred             EEEE-CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCc-------------EEEEECCCCCCCcccE
Confidence            4443 3467999999988777766666788999999988888888766442             66666654    1112


Q ss_pred             EEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063        567 ARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS  603 (894)
Q Consensus       567 ~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~  603 (894)
                      ..+.........|++++.++.|+.. ...+.|.+++++
T Consensus        70 ~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~  107 (316)
T 1ijq_A           70 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  107 (316)
T ss_dssp             EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence            2222223455778887655544433 445667766654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.08  E-value=0.00066  Score=76.35  Aligned_cols=116  Identities=10%  Similarity=0.132  Sum_probs=73.1

Q ss_pred             cceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC-eEEEeccCccceee
Q psy10063        477 EPINDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA-REVTTTSTKVGKFD  554 (894)
Q Consensus       477 ~~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~-~~v~~~~~~~~~~~  554 (894)
                      .....|+|+| ++..|+.+...+.|+++|+..+++...+........|+|+++|++|+++...+. +..          .
T Consensus       137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~----------~  206 (430)
T 3tc9_A          137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRP----------N  206 (430)
T ss_dssp             SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSE----------E
T ss_pred             CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccc----------e
Confidence            4678899998 455666666558899999988777666665677899999999998888775321 100          0


Q ss_pred             EEEEeccccceE--EEccCCCCCeEEEEEec-CCCEEEEEeCCCcEEEEECCC
Q psy10063        555 ARFYHLIFEEEF--ARIKGHFGPINSLAFHP-DGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       555 v~vwd~~~~~~~--~~l~~h~~~V~~l~~sp-dg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +.+++. .+...  ..+. ......+++++| +|.++++-...+.|++|+.+.
T Consensus       207 v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~  257 (430)
T 3tc9_A          207 NYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTT  257 (430)
T ss_dssp             EEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred             EEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence            222222 22211  1221 123456788888 566555555667787777653

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.08  E-value=0.0085  Score=64.49  Aligned_cols=103  Identities=7%  Similarity=-0.035  Sum_probs=53.3

Q ss_pred             eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      +..+++.+++.+++. +.+|.|++++...++....+.       .....+++.+++..++++. ++    .| ++..+.|
T Consensus       207 ~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g----~i-~~S~DgG  279 (327)
T 2xbg_A          207 LHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AG----AL-LCSQDGG  279 (327)
T ss_dssp             EEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TT----CE-EEESSTT
T ss_pred             cceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CC----eE-EEeCCCC
Confidence            345556666655443 345666655322222222111       1123455666666555443 32    24 4455556


Q ss_pred             ceeeecc---CCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        836 EEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       836 ~~l~~l~---gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      +.-..+.   .+...+.+|.|..+++ ++.++.+|.|.-++
T Consensus       280 ~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          280 QTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             SSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             cccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence            5444443   2345688999987666 55666788665544

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.06  E-value=0.022  Score=71.65  Aligned_cols=99  Identities=13%  Similarity=0.110  Sum_probs=58.5

Q ss_pred             CCEEEEec----------CCCcEEEEEccCCce--eeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee
Q psy10063        772 REKLALAL----------ADKVSERYRDRKNKA--TAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA  839 (894)
Q Consensus       772 g~~Latgs----------~Dg~I~iwd~~~~~~--~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~  839 (894)
                      ..+|++|.          ..|.|++|++...+.  +..........+++.-+.+|+++.+.     .|+||++...+.++
T Consensus       844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~-----~l~vy~l~~~~~L~  918 (1158)
T 3ei3_A          844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINS-----TVRLYEWTTEKELR  918 (1158)
T ss_dssp             CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETT-----EEEEEEECTTSCEE
T ss_pred             CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCC-----EEEEEECCCCceEE
Confidence            47888775          357899999865443  22222222333344433477777665     49999998765554


Q ss_pred             eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecC
Q psy10063        840 RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD  875 (894)
Q Consensus       840 ~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~  875 (894)
                      .-..+...|..+.....|.+|+.|..-..|.++.++
T Consensus       919 ~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~  954 (1158)
T 3ei3_A          919 TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYK  954 (1158)
T ss_dssp             EEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred             EEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence            111122224444444457788888877778776654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.06  E-value=0.0027  Score=69.12  Aligned_cols=182  Identities=8%  Similarity=-0.086  Sum_probs=111.2

Q ss_pred             CCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe----------CCCCc-
Q psy10063        409 SAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS----------HSQAV-  476 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~----------~d~~i-  476 (894)
                      ...+.+|+|++.++.|+.. ...+.|+.+++..+.....+..... ....+++.+.+..|....          .++.. 
T Consensus        72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~  150 (349)
T 3v64_C           72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR  150 (349)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCC-CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence            3457899999866666554 4567899999886654444433333 567888887655544333          22221 


Q ss_pred             --------cceEEEEEecCCCEEEEEE-CC-CCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        477 --------EPINDMQFSKDATMFITAS-KD-HTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       477 --------~~V~~l~~spdg~~L~sgs-~D-g~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                              .....|++.|.+.+|+... .. +.|..+++........+.. -.....|+|++++.+|+++......    
T Consensus       151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~----  226 (349)
T 3v64_C          151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV----  226 (349)
T ss_dssp             EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE----
T ss_pred             EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE----
Confidence                    3567889998666555554 33 6788887764333222222 3467899999999999888765542    


Q ss_pred             ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        546 TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                               |..+++........+.........|++. ++.++++-...+.|..++...+
T Consensus       227 ---------I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G  276 (349)
T 3v64_C          227 ---------IERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTG  276 (349)
T ss_dssp             ---------EEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred             ---------EEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCC
Confidence                     6667765433232333344566788883 4444455455667777774443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.02  E-value=0.0053  Score=65.75  Aligned_cols=182  Identities=9%  Similarity=-0.054  Sum_probs=108.4

Q ss_pred             CCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCC---CeE-EEEecCCCCCCeeEEEEcCCCCEEEEEeC----------
Q psy10063        408 QSAKITSLLWGNLDQYIITG-HAKGDICTWDLRM---GRE-LESISGHAKEPINDMQFSKDATMFITASH----------  472 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~t---g~~-~~~l~~h~~~~V~~v~~spdg~~la~~~~----------  472 (894)
                      ....+.+++|+++++.|+.+ ...+.|+.+++..   +.. ...+..... .+..|++.+.+..|.....          
T Consensus        28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavd~~~~~ly~~d~~~~~I~~~~~  106 (316)
T 1ijq_A           28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVADT  106 (316)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC-CcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence            34668899999876655554 4568899999875   122 223332223 5678888875554443322          


Q ss_pred             CCCc---------cceEEEEEecCCCEEEEEECC--CCEEEEEcCCCcEEEEEe-C-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063        473 SQAV---------EPINDMQFSKDATMFITASKD--HTAKLFTTHDRQLLKTYT-T-ERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       473 d~~i---------~~V~~l~~spdg~~L~sgs~D--g~V~iwdl~~~~~~~~~~-~-~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                      ++..         .....|++.|.+.+|+.+...  +.|..+++. |.....+. . -.....|+|++++.+|+++....
T Consensus       107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~  185 (316)
T 1ijq_A          107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL  185 (316)
T ss_dssp             TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred             CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCC
Confidence            2211         355688899866666655543  678777775 44444443 2 35678999999999998887655


Q ss_pred             CeEEEeccCccceeeEEEEeccccceEEEc-c--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        540 AREVTTTSTKVGKFDARFYHLIFEEEFARI-K--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ..             |..+|+... ..+.+ .  ........|++. .+.++++-...+.|..++...++
T Consensus       186 ~~-------------I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~  240 (316)
T 1ijq_A          186 HS-------------ISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS  240 (316)
T ss_dssp             TE-------------EEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred             Ce-------------EEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence            42             666776532 22222 1  223456778885 34455555566778888865543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.02  E-value=0.00072  Score=76.07  Aligned_cols=62  Identities=10%  Similarity=-0.005  Sum_probs=46.6

Q ss_pred             CccceEEEEEecC--CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        475 AVEPINDMQFSKD--ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       475 ~i~~V~~l~~spd--g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                      .+.....|+|+++  +..|+.+...+.|+.+|+..+++...+.......+|+|+++|+ |+++..
T Consensus       137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~  200 (433)
T 4hw6_A          137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDD  200 (433)
T ss_dssp             CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEEC
T ss_pred             ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcC
Confidence            3456789999984  4455555544899999998888776655556789999999999 666654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.00  E-value=0.0044  Score=70.07  Aligned_cols=41  Identities=12%  Similarity=0.097  Sum_probs=29.1

Q ss_pred             CCCCeeEEEEeeC-CcEEEEecCCCcEEEEecCccccccccc
Q psy10063        844 HFGPINSLAFHPD-GKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       844 H~~~V~~l~fSpd-g~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      .......|++.++ |.++++-...+.||.++++.........
T Consensus       442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~~~  483 (496)
T 3kya_A          442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAGDE  483 (496)
T ss_dssp             CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC------
T ss_pred             hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccccCC
Confidence            3455778999997 8877877788999999999887776654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.96  E-value=0.0069  Score=67.26  Aligned_cols=100  Identities=9%  Similarity=-0.079  Sum_probs=62.1

Q ss_pred             EEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc----ce
Q psy10063        490 MFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE----EE  565 (894)
Q Consensus       490 ~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~----~~  565 (894)
                      +|+.+. ...|+..|+........+.....+..|+|++.+..|+.+......             |+.+++...    ..
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~-------------I~~~~~~g~~~~~~~  150 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-------------ICSTQLDRAHGVSSY  150 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTE-------------EEEEEC------CCC
T ss_pred             eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCe-------------EEEEEcccCCCCCcc
Confidence            444443 467888899877766666667789999999988888888765542             555665531    12


Q ss_pred             EEEccCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECC
Q psy10063        566 FARIKGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLS  603 (894)
Q Consensus       566 ~~~l~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~  603 (894)
                      ...+.........|++.+.++.|+.. ...+.|.+.+++
T Consensus       151 ~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~  189 (400)
T 3p5b_L          151 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  189 (400)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred             eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence            22233344566788888754444443 345566666554

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.90  E-value=0.0064  Score=73.33  Aligned_cols=113  Identities=4%  Similarity=-0.109  Sum_probs=67.9

Q ss_pred             ceEEEEEecCCCEEE-EEECCCCEEEEEcCCC----cEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        478 PINDMQFSKDATMFI-TASKDHTAKLFTTHDR----QLLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       478 ~V~~l~~spdg~~L~-sgs~Dg~V~iwdl~~~----~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                      .+..|+|.+...+|+ +-...+.|+.+++...    .....+. .......|++.+.++.|+++......          
T Consensus       425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~----------  494 (791)
T 3m0c_C          425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT----------  494 (791)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE----------
T ss_pred             ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCe----------
Confidence            466777777444444 4344567888887642    2233333 23567899999999888888765542          


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC--CcEEEEECC
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED--GFLISNTLS  603 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D--g~I~vwdl~  603 (894)
                         |.+.++........+.........|+++|.+.+|+.....  +.|.+.+++
T Consensus       495 ---I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d  545 (791)
T 3m0c_C          495 ---VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  545 (791)
T ss_dssp             ---EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             ---EEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence               6777776443333333344567899999876666655432  456655554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.89  E-value=0.01  Score=65.86  Aligned_cols=185  Identities=9%  Similarity=-0.047  Sum_probs=112.2

Q ss_pred             cCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeC---------
Q psy10063        407 DQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASH---------  472 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~---------  472 (894)
                      .....+.+|+|++.++.|+.. ...+.|+.+++...    .....+..... ....|++.+.+..|.....         
T Consensus       109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavD~~~~~lY~~d~~~~~I~~~~  187 (400)
T 3p5b_L          109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVAD  187 (400)
T ss_dssp             CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred             cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC-CcccEEEEecCCceEEEECCCCeEEEEe
Confidence            345788999999876666655 45678999998752    22333332333 6778888875554444332         


Q ss_pred             -CCCc---------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063        473 -SQAV---------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       473 -d~~i---------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                       ++..         .....|++.|.+.+|+....  .+.|...++........+.. -.....|+|++++.+|+++....
T Consensus       188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~  267 (400)
T 3p5b_L          188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL  267 (400)
T ss_dssp             TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred             CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence             2221         34678899987666666543  36788888765444333333 36789999999999999887655


Q ss_pred             CeEEEeccCccceeeEEEEeccccceEEEcc--CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        540 AREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                      ..             |+.+|+........+.  +......+|++. .+.++++-...+.|..++...++
T Consensus       268 ~~-------------I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~  322 (400)
T 3p5b_L          268 HS-------------ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS  322 (400)
T ss_dssp             TE-------------EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred             CE-------------EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence            42             6666765333222222  223455677773 33444555556778888855543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.82  E-value=0.0042  Score=66.65  Aligned_cols=182  Identities=6%  Similarity=-0.063  Sum_probs=108.3

Q ss_pred             CCEEEEEEccCCCEEEE-ecCCCcEEEEecCCCeEE-EEecCCCCCCeeEEEEcCCCCEEEEEe----------CCCCc-
Q psy10063        410 AKITSLLWGNLDQYIIT-GHAKGDICTWDLRMGREL-ESISGHAKEPINDMQFSKDATMFITAS----------HSQAV-  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~s-gs~Dg~I~iWd~~tg~~~-~~l~~h~~~~V~~v~~spdg~~la~~~----------~d~~i-  476 (894)
                      ..+.+|+|.+.++.|+. -...+.|+.+++..+... ..+..... ....+++.+.+..|....          .++.. 
T Consensus        35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~  113 (318)
T 3sov_A           35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR  113 (318)
T ss_dssp             EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC-CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence            35678999986555554 455678999998765321 12222222 456777776544443332          22221 


Q ss_pred             --------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        477 --------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       477 --------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                              .....|++.|.+.+|+.+..  .+.|..+++........+.. -.....|+|++++..|+.+......    
T Consensus       114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~----  189 (318)
T 3sov_A          114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF----  189 (318)
T ss_dssp             EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE----
T ss_pred             EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCE----
Confidence                    34578889987666666653  46777777753332222222 3567899999999999888765542    


Q ss_pred             ccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10063        546 TSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL  606 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~  606 (894)
                               |..+|+........+.+.......|++.. +.++++-...+.|..++...++
T Consensus       190 ---------I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          190 ---------IHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             ---------EEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred             ---------EEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence                     66677653322222233445567788753 3444554556778888876554

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.74  E-value=0.00043  Score=82.58  Aligned_cols=193  Identities=11%  Similarity=0.065  Sum_probs=108.1

Q ss_pred             CEEEEEEccCCCEEEEecC-CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe-CCCCc--cceEEE----
Q psy10063        411 KITSLLWGNLDQYIITGHA-KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS-HSQAV--EPINDM----  482 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~-Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~-~d~~i--~~V~~l----  482 (894)
                      ...++++..+|+++++|+. +..+.+||..+++....-..+....-.++++.++|++++.|+ .++..  ..+...    
T Consensus       244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t  323 (656)
T 1k3i_A          244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS  323 (656)
T ss_dssp             SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred             ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence            3445778889999999984 458999999888765433222221334567778999999998 33321  111110    


Q ss_pred             -EE--------------------ecCCCEEEEEECCC---------CEEEEEcCCCcEEEEEeCC----------CCeeE
Q psy10063        483 -QF--------------------SKDATMFITASKDH---------TAKLFTTHDRQLLKTYTTE----------RPVNS  522 (894)
Q Consensus       483 -~~--------------------spdg~~L~sgs~Dg---------~V~iwdl~~~~~~~~~~~~----------~~v~~  522 (894)
                       .|                    ..+++.++.|+.+|         .|.+||.............          ..-.+
T Consensus       324 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a  403 (656)
T 1k3i_A          324 KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA  403 (656)
T ss_dssp             TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred             CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence             01                    12344455665544         4678888877655433321          12244


Q ss_pred             EEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc--cCCCCCe-EEEEEecCCCEEEEEeCC----
Q psy10063        523 AALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPI-NSLAFHPDGKSYASGGED----  594 (894)
Q Consensus       523 l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V-~~l~~spdg~~l~sgs~D----  594 (894)
                      +.|.. +++.+++|+.++...   .........|.+||....+.....  ..+.... .++++.++|++++.|+.+    
T Consensus       404 v~~~~~~~~i~v~GG~~~~~~---~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~  480 (656)
T 1k3i_A          404 VMYDAVKGKILTFGGSPDYQD---SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP  480 (656)
T ss_dssp             EEEETTTTEEEEECCBSSSSS---SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred             EeccCCCCeEEEEeCCCCCCC---CCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC
Confidence            55544 566666665432100   000001113677787766554433  2233332 345667899999998854    


Q ss_pred             -------CcEEEEECCCCc
Q psy10063        595 -------GFLISNTLSNGL  606 (894)
Q Consensus       595 -------g~I~vwdl~~~~  606 (894)
                             ..+.+||.+..+
T Consensus       481 ~~~~~~~~~v~~ydp~t~~  499 (656)
T 1k3i_A          481 FEDSTPVFTPEIYVPEQDT  499 (656)
T ss_dssp             TCCCSBCCCCEEEEGGGTE
T ss_pred             cCCCCcccceEEEcCCCCc
Confidence                   457899887654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.73  E-value=0.013  Score=62.67  Aligned_cols=77  Identities=9%  Similarity=-0.088  Sum_probs=50.6

Q ss_pred             CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccc
Q psy10063        802 CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDY  881 (894)
Q Consensus       802 ~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~  881 (894)
                      ...++|++++.+|+.+-....   .|+.+|++.......+.+.......|++. .+.++++-...+.|..++...++...
T Consensus       168 Pnglavd~~~~~lY~aD~~~~---~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~  243 (318)
T 3sov_A          168 PNGLTLDYEEQKLYWADAKLN---FIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLR  243 (318)
T ss_dssp             EEEEEEETTTTEEEEEETTTT---EEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred             ccEEEEeccCCEEEEEECCCC---EEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceE
Confidence            347889999998888765433   69999987443322233344556678875 44556666677888888886665443


Q ss_pred             c
Q psy10063        882 T  882 (894)
Q Consensus       882 ~  882 (894)
                      .
T Consensus       244 ~  244 (318)
T 3sov_A          244 E  244 (318)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.72  E-value=0.0037  Score=66.88  Aligned_cols=112  Identities=11%  Similarity=0.134  Sum_probs=78.1

Q ss_pred             ceEEEEE--ecC-CC-EEEEEECCCCEEEEEcC-------CCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        478 PINDMQF--SKD-AT-MFITASKDHTAKLFTTH-------DRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       478 ~V~~l~~--spd-g~-~L~sgs~Dg~V~iwdl~-------~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                      .++.||+  ++. ++ ++++...+|.+..|++.       ..++++.|.....+..|++.+...+|+++-.+..      
T Consensus       129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G------  202 (355)
T 3amr_A          129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA------  202 (355)
T ss_dssp             SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE------
T ss_pred             CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce------
Confidence            4556666  553 44 57777888999999883       3467888888889999999999999999988854      


Q ss_pred             cCccceeeEEEEecc-----ccceEEEcc-CC-CCCeEEEEEe--cCCC-EEEEEe-CCCcEEEEECC
Q psy10063        547 STKVGKFDARFYHLI-----FEEEFARIK-GH-FGPINSLAFH--PDGK-SYASGG-EDGFLISNTLS  603 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~-----~~~~~~~l~-~h-~~~V~~l~~s--pdg~-~l~sgs-~Dg~I~vwdl~  603 (894)
                              |+.++.+     .++.+..+. +| ...+..|++-  ++++ ||++.+ .+..+.|||.+
T Consensus       203 --------Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          203 --------IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             --------EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             --------EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence                    3444433     234444442 23 3478888884  5555 565555 57789999986

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.72  E-value=0.014  Score=70.40  Aligned_cols=184  Identities=9%  Similarity=-0.058  Sum_probs=110.2

Q ss_pred             cCCCCEEEEEEccCCCEEEE-ecCCCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeC---------
Q psy10063        407 DQSAKITSLLWGNLDQYIIT-GHAKGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASH---------  472 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~s-gs~Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~---------  472 (894)
                      .....+.+|+|.+.+.+|+. -...+.|+.+++...    .....+..... ....|++.+.++.|+.+..         
T Consensus       421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~-~P~GLAvD~~~~~LY~tD~~~~~I~v~~  499 (791)
T 3m0c_C          421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVAD  499 (791)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC-CcceeeeeecCCcEEEEecCCCeEEEEe
Confidence            34567889999986555554 445678999998753    22333433333 6778888887766554432         


Q ss_pred             -CCCc---------cceEEEEEecCCCEEEEEEC-C-CCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCC
Q psy10063        473 -SQAV---------EPINDMQFSKDATMFITASK-D-HTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       473 -d~~i---------~~V~~l~~spdg~~L~sgs~-D-g~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~  539 (894)
                       ++..         .....|++.|.+.+|+.... . +.|.+.++........+... .....|++++.+.+|+++....
T Consensus       500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~  579 (791)
T 3m0c_C          500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL  579 (791)
T ss_dssp             TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred             CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence             2221         35678999997666666553 2 67888888644444444433 5789999999989998887655


Q ss_pred             CeEEEeccCccceeeEEEEeccccceEEEccC--CCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        540 AREVTTTSTKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                      ..             |+++++........+..  ......+|++.  +.+|+... ..+.|...+...++
T Consensus       580 ~~-------------I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~  634 (791)
T 3m0c_C          580 HS-------------ISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS  634 (791)
T ss_dssp             TE-------------EEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred             Cc-------------EEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCc
Confidence            32             66666654333333322  22344566663  33455444 45667777655543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.65  E-value=0.0029  Score=67.08  Aligned_cols=169  Identities=13%  Similarity=0.116  Sum_probs=105.9

Q ss_pred             EecCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEE-ecCCC--CCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELES-ISGHA--KEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~-l~~h~--~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      +......--+++|.+...+|+.+ -..+.|..||...+..... +.+-.  +          ++.           ..+.
T Consensus         8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g----------~~~-----------~~~s   66 (334)
T 2p9w_A            8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNG----------DGE-----------QQMS   66 (334)
T ss_dssp             ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSS----------CCS-----------EEEE
T ss_pred             ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccC----------CCc-----------ceee
Confidence            44455556688998755555544 4789999999876644333 22100  1          000           0245


Q ss_pred             EEEE---ecCCCEEEEEE-------------CCCCEEEEEcC---CCcEEEEEeCC--------------CCeeEEEEcC
Q psy10063        481 DMQF---SKDATMFITAS-------------KDHTAKLFTTH---DRQLLKTYTTE--------------RPVNSAALSP  527 (894)
Q Consensus       481 ~l~~---spdg~~L~sgs-------------~Dg~V~iwdl~---~~~~~~~~~~~--------------~~v~~l~~sp  527 (894)
                      .|.|   .++++++++..             .+..|..||+.   +++.+..+...              .....++..+
T Consensus        67 Gl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~  146 (334)
T 2p9w_A           67 GLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR  146 (334)
T ss_dssp             EEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT
T ss_pred             EEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC
Confidence            5666   45655555432             26779999999   78877766531              2478999999


Q ss_pred             CCCEEEEEECC-CCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        528 ILPHVVLGGGQ-EAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       528 dg~~l~~~~~~-~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      +|...++++.. +.  ||.++....  .+..|.+...     ..........|+++|+|+.|+.....|.|..+|+.
T Consensus       147 ~GnaYVt~s~~~~~--I~rV~pdG~--~~~~~~~~~~-----~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~  214 (334)
T 2p9w_A          147 DGNSYVAFALGMPA--IARVSADGK--TVSTFAWESG-----NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS  214 (334)
T ss_dssp             TSCEEEEEEESSCE--EEEECTTSC--CEEEEEECCC-----CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred             CCCEEEeCCCCCCe--EEEEeCCCC--EEeeeeecCC-----CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence            99988887766 54  333333322  1445544321     11223346799999999988888779999999987

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.62  E-value=0.2  Score=58.76  Aligned_cols=126  Identities=3%  Similarity=-0.113  Sum_probs=77.9

Q ss_pred             CCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC-----------CCCc-
Q psy10063        410 AKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH-----------SQAV-  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~-----------d~~i-  476 (894)
                      .....|++...++.|+.+ ...+.|.+.++........+..... ....|++.|...+|.....           ||.. 
T Consensus        80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~-~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~  158 (628)
T 4a0p_A           80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD-SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER  158 (628)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC-CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC-CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence            456788888776655544 4567899999874432222323333 6889999986555554442           2211 


Q ss_pred             -------cceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCC
Q psy10063        477 -------EPINDMQFSKDATMFITAS-KDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       477 -------~~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                             .....|++++++++|+.+. ..+.|..+|+..... +.+. .......|++..  .+|+......
T Consensus       159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~  227 (628)
T 4a0p_A          159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSR  227 (628)
T ss_dssp             EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTT
T ss_pred             EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCC
Confidence                   3556889999777776664 457788899875444 2333 334566787764  4666666433

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.61  E-value=0.0095  Score=64.84  Aligned_cols=57  Identities=25%  Similarity=0.243  Sum_probs=37.4

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE--Ee----CCCCeeEEEEcCC---CCEEEEEEC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT--YT----TERPVNSAALSPI---LPHVVLGGG  537 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~--~~----~~~~v~~l~~spd---g~~l~~~~~  537 (894)
                      .-+.|+|.|+|++++ +..+|.|++++  +++....  +.    .......|+|+|+   +.+|+++..
T Consensus        32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~   97 (352)
T 2ism_A           32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT   97 (352)
T ss_dssp             CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred             CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence            467788888887444 45668888887  4442211  11    2357899999998   667766654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.59  E-value=0.0086  Score=61.62  Aligned_cols=151  Identities=11%  Similarity=0.071  Sum_probs=89.8

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc---EEEEEeC-------CCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ---LLKTYTT-------ERPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~---~~~~~~~-------~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                      ....|++.+++.++++.-.++.|.++++....   .+..+..       ......|+|+|++.+|+++.......+|.++
T Consensus        71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~  150 (255)
T 3qqz_A           71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN  150 (255)
T ss_dssp             SEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence            56678888888777776677889999886543   2233321       2346899999999999998877765555443


Q ss_pred             CccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCCCcc----cc--------CCCce
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSNGLD----IS--------EGSFT  614 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~~~~----~~--------~~~~v  614 (894)
                      ......++.+.+...  .  .-..+...+.+|+++|... +++.....+.|.++|.+....    +.        .....
T Consensus       151 g~~~~~~l~i~~~~~--~--~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qp  226 (255)
T 3qqz_A          151 GLLSSNELHISKDKA--L--QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQA  226 (255)
T ss_dssp             STTCSSCCEEEECHH--H--HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSE
T ss_pred             ccccCCceeeecchh--h--ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCC
Confidence            111110112211100  0  0012344678999998654 444445566677777665421    11        12356


Q ss_pred             eeeEECcCCcEEEecCCe
Q psy10063        615 SSSTQQPDGLVYPSQGGH  632 (894)
Q Consensus       615 ~~~~~spdg~~l~~~~g~  632 (894)
                      ..++|.++|.++......
T Consensus       227 EGia~d~~G~lyIvsE~n  244 (255)
T 3qqz_A          227 EGVAMDASGNIYIVSEPN  244 (255)
T ss_dssp             EEEEECTTCCEEEEETTT
T ss_pred             CeeEECCCCCEEEEcCCc
Confidence            788899988877555544

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.56  E-value=0.019  Score=62.52  Aligned_cols=213  Identities=11%  Similarity=0.056  Sum_probs=104.7

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe-EEEEec--CCCCCCeeEEEEcCC---CCEEEEE-eC---C----C
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR-ELESIS--GHAKEPINDMQFSKD---ATMFITA-SH---S----Q  474 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~-~~~~l~--~h~~~~V~~v~~spd---g~~la~~-~~---d----~  474 (894)
                      -....+|+|.|||++++ +..+|.|+++| ..|+ .+..+.  .........|+|+|+   +.+|.++ ..   +    .
T Consensus        28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            45678888999887444 44558888887 4454 222221  111126788888887   4443332 21   1    1


Q ss_pred             Cc---------------------------cceEEEEEecCCCEEEEEECC-------------CCEEEEEcCCCcE----
Q psy10063        475 AV---------------------------EPINDMQFSKDATMFITASKD-------------HTAKLFTTHDRQL----  510 (894)
Q Consensus       475 ~i---------------------------~~V~~l~~spdg~~L~sgs~D-------------g~V~iwdl~~~~~----  510 (894)
                      .|                           .....|+|.|||.++++.+..             |.|..++.. ++.    
T Consensus       106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n  184 (354)
T 3a9g_A          106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN  184 (354)
T ss_dssp             EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred             EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence            11                           122457888888766654321             334333332 220    


Q ss_pred             ----EEEE-eCCCCeeEEEEcC-CCCEEEEEECCCC-eEEEeccCccceeeEEEEecccc--------ceEEEccCCCCC
Q psy10063        511 ----LKTY-TTERPVNSAALSP-ILPHVVLGGGQEA-REVTTTSTKVGKFDARFYHLIFE--------EEFARIKGHFGP  575 (894)
Q Consensus       511 ----~~~~-~~~~~v~~l~~sp-dg~~l~~~~~~~~-~~v~~~~~~~~~~~v~vwd~~~~--------~~~~~l~~h~~~  575 (894)
                          ...+ .+......|+|++ +|.++++-...+. -.+..+... +.   .-|....+        ..+..+......
T Consensus       185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G-~n---yGwp~~~g~~~~~~~~~p~~~~~~~~~a  260 (354)
T 3a9g_A          185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG-GN---YGWPLATGKAGRGEFVDPVIDTGSETWA  260 (354)
T ss_dssp             SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT-CB---CCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred             CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC-Cc---CCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence                1111 1234467899999 5554443332221 111111100 00   00110000        122222112235


Q ss_pred             eEEEEEe-------cCCCEEEEEeCCCcEEEEECCCCc------cccC--CCceeeeEECcCCcEEEe
Q psy10063        576 INSLAFH-------PDGKSYASGGEDGFLISNTLSNGL------DISE--GSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       576 V~~l~~s-------pdg~~l~sgs~Dg~I~vwdl~~~~------~~~~--~~~v~~~~~spdg~~l~~  628 (894)
                      ...++|.       .+|.++++.-..+.|...+++...      .+..  ...+..+++.|||.+++.
T Consensus       261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~  328 (354)
T 3a9g_A          261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS  328 (354)
T ss_dssp             EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred             CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence            6788883       567777666666778888877431      1111  234667777888765543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.51  E-value=0.058  Score=60.72  Aligned_cols=60  Identities=10%  Similarity=0.191  Sum_probs=39.4

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---------CCCCeeEEEEcCC---CCEEEEEEC
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---------TERPVNSAALSPI---LPHVVLGGG  537 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---------~~~~v~~l~~spd---g~~l~~~~~  537 (894)
                      ..++|+|.|+|++|++-...+.|++++..+++......         ....+..|+|+|+   +.+|++...
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s   99 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT   99 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence            57788898988866654333468888766565433221         2356779999997   667766653

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.48  E-value=0.00066  Score=81.28  Aligned_cols=88  Identities=3%  Similarity=-0.153  Sum_probs=46.0

Q ss_pred             EEEeeCCCCCEEE-EecCCCcEEEEEccCCce--eecc---ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063        764 FKMPEPPKREKLA-LALADKVSERYRDRKNKA--TAGF---LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE  837 (894)
Q Consensus       764 ~~la~spdg~~La-tgs~Dg~I~iwd~~~~~~--~~~~---~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~  837 (894)
                      ..|+|+|++.+|+ +-...+.|+++++.....  +...   ......+++  ++.+|+.+.....   .|++++..+|+.
T Consensus       543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glav--d~~~lywtd~~~~---~V~~~d~~~G~~  617 (699)
T 1n7d_A          543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINE---AIFSANRLTGSD  617 (699)
T ss_dssp             CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEE--ETTEEEEECSTTT---CEEEEETTTEEE
T ss_pred             cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEE--ECCEEEEEeCCCC---eEEEEEccCCCc
Confidence            3466666544433 334455677776643221  1111   111123333  4556666554332   589999888888


Q ss_pred             eeeccCCCCCeeEEEEeeC
Q psy10063        838 FARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       838 l~~l~gH~~~V~~l~fSpd  856 (894)
                      +..+.........|++...
T Consensus       618 ~~~i~~~~~~P~~i~v~~~  636 (699)
T 1n7d_A          618 VNLLAENLLSPEDMVLFHQ  636 (699)
T ss_dssp             EECCCTTCSSCCCCCBCSS
T ss_pred             eEEeecCCCCCcEEEEeCc
Confidence            8777654444555655433

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.45  E-value=0.00061  Score=81.56  Aligned_cols=79  Identities=10%  Similarity=-0.129  Sum_probs=49.5

Q ss_pred             CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc--CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        801 SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK--GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       801 ~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~--gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      ....++|++++.+|+++-....   .|+++++........+.  +.......|++..+ .++++....+.|.+++...++
T Consensus       541 ~PnGlavd~~~~~LY~aD~~~~---~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          541 WPNGITLDLLSGRLYWVDSKLH---SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS  616 (699)
T ss_dssp             SCCCEEECTTTCCEEEEETTTT---EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred             CccEEEEeccCCEEEEEecCCC---eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence            3457899999888888765432   59999987433222222  22233445666543 556666667889999876666


Q ss_pred             ccccc
Q psy10063        879 FDYTF  883 (894)
Q Consensus       879 ~~~~~  883 (894)
                      .+..+
T Consensus       617 ~~~~i  621 (699)
T 1n7d_A          617 DVNLL  621 (699)
T ss_dssp             EEECC
T ss_pred             ceEEe
Confidence            55444

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.44  E-value=0.53  Score=59.16  Aligned_cols=111  Identities=8%  Similarity=-0.044  Sum_probs=67.3

Q ss_pred             CCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-c--ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc
Q psy10063        760 VDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-F--LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE  836 (894)
Q Consensus       760 ~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-~--~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~  836 (894)
                      .+.|.+|+-- .| +|++|- ...|++|++...+.+.. .  ...+..+.+...+.+++++..-++  ..+..|+...++
T Consensus       885 ~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~S--v~~~~y~~~~~~  959 (1158)
T 3ei3_A          885 KGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS--VLLLAYKPMEGN  959 (1158)
T ss_dssp             SSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBC--EEEEEEETTTTE
T ss_pred             CCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhhe--EEEEEEEcCCCe
Confidence            4567777644 34 455443 36799999987654441 1  111112234456778877766553  234445555444


Q ss_pred             eeeecc-CCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        837 EFARIK-GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       837 ~l~~l~-gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                      +...-+ .+..+|+++.|-.++ .++.+..+|.|.+.++..
T Consensus       960 L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~  999 (1158)
T 3ei3_A          960 FEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS  999 (1158)
T ss_dssp             EEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred             EEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence            433222 356778899998765 567788999999998765

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.38  E-value=0.46  Score=57.18  Aligned_cols=171  Identities=15%  Similarity=0.130  Sum_probs=96.2

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------  476 (894)
                      ..|.++....+| .|..|..+| |.+||..+++.......... .|.++.. .+| .|.++..+|-.             
T Consensus        63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~-~i~~i~~-~~g-~lWigt~~Gl~~~~~~~~~~~~~~  137 (758)
T 3ott_A           63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPT-DVRTMAL-QGD-TLWLGALNGLYTYQLQSRKLTSFD  137 (758)
T ss_dssp             SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCS-CEEEEEE-ETT-EEEEEETTEEEEEETTTCCEEEEC
T ss_pred             ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCc-eEEEEEe-cCC-cEEEEcCCcceeEeCCCCeEEEec
Confidence            468888877766 566666555 78999887654321111112 4666654 344 33333332211             


Q ss_pred             --------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-------CCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        477 --------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-------ERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       477 --------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-------~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                              ..|.+|....+|.+.+ |..+| |..|+...++... +..       ...|.++....++..|.++...|  
T Consensus       138 ~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G--  212 (758)
T 3ott_A          138 TRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY--  212 (758)
T ss_dssp             HHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE--
T ss_pred             cCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCC--
Confidence                    2466676666777555 44444 7778877765432 221       12478888888777777766433  


Q ss_pred             EEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                                   |..++...++...........|.+|....+|.+.+ |.. +-|.+++....
T Consensus       213 -------------l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~  261 (758)
T 3ott_A          213 -------------LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTT  261 (758)
T ss_dssp             -------------EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTS
T ss_pred             -------------CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCC
Confidence                         45555554432211111233578888877777554 444 45778877654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.36  E-value=0.16  Score=54.53  Aligned_cols=58  Identities=12%  Similarity=0.022  Sum_probs=40.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEE--E-----eCCCCeeEEEEcCC---CCEEEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKT--Y-----TTERPVNSAALSPI---LPHVVLG  535 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~--~-----~~~~~v~~l~~spd---g~~l~~~  535 (894)
                      ..+.|+|.|||.+|++--..|.|++++...++....  +     ........|+|+|+   ..+|++.
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~  100 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY  100 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence            578889999998766654488899888766654322  1     12467899999996   4556554

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.32  E-value=0.024  Score=61.60  Aligned_cols=93  Identities=13%  Similarity=0.178  Sum_probs=55.1

Q ss_pred             CccceeeeeccCccEEEecCCCeEEEEE-------------ecCCCCEEEEEEccC---CCEEEEecC-C-----CcEEE
Q psy10063        378 LSVDRLNSMSPAARKLATNAEPVVKMQV-------------TDQSAKITSLLWGNL---DQYIITGHA-K-----GDICT  435 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~~~~~~l-------------~~H~~~V~~l~~spd---g~~L~sgs~-D-----g~I~i  435 (894)
                      ....+.++|.+||++++......+.+.-             .........|+|+|+   +++|+.+.. .     ..|..
T Consensus        30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r  109 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR  109 (352)
T ss_dssp             CSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred             CCCceEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence            4445667788888877765544333211             112357889999998   555555433 2     56888


Q ss_pred             EecCCCe-----E-EEEec---CCCCCCeeEEEEcCCCCEEEEEe
Q psy10063        436 WDLRMGR-----E-LESIS---GHAKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       436 Wd~~tg~-----~-~~~l~---~h~~~~V~~v~~spdg~~la~~~  471 (894)
                      |++..++     . +..+.   +... ....|+|.|||.++++.+
T Consensus       110 ~~~~~~~~~~~~~l~~~~p~~~~~~h-~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          110 LRHLGERGVLDRVVLDGIPARPHGLH-SGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEECSSCEEEEEEEEEEECCCTTCCC-CCCCEEECTTSCEEEECC
T ss_pred             EEeCCCCcCceEEEEEeCCCCCCCCc-CCceEEECCCCCEEEEEC
Confidence            8877441     1 22233   1111 346899999997666643

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.29  E-value=0.013  Score=65.60  Aligned_cols=113  Identities=11%  Similarity=0.111  Sum_probs=70.6

Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEE------EEeCCCCccceEEEEEec---CCCEEEE
Q psy10063        423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI------TASHSQAVEPINDMQFSK---DATMFIT  493 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la------~~~~d~~i~~V~~l~~sp---dg~~L~s  493 (894)
                      .+.||+..|.|+|+-+.+++.++.+..-...+-..--|..+.+.++      ..++.    .--.+++..   ||++|+.
T Consensus        72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~----HHp~~S~tdg~yDGrylfi  147 (638)
T 3sbq_A           72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDC----HHPHISMTDGKYDGKYLFI  147 (638)
T ss_dssp             EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCC----CCCEEEEETTEEEEEEEEE
T ss_pred             EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCc----CCCcccccCCeeeeEEEEE
Confidence            4668899999999999999999888632110000000000000000      00000    112233332   6888888


Q ss_pred             EE-CCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEc--CCCCEEEEEECCC
Q psy10063        494 AS-KDHTAKLFTTHDRQLLKTYTT--ERPVNSAALS--PILPHVVLGGGQE  539 (894)
Q Consensus       494 gs-~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~s--pdg~~l~~~~~~~  539 (894)
                      -. ....|-..+++..++-+.++.  ...+.+++|-  |.-.|+++++...
T Consensus       148 Ndkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~  198 (638)
T 3sbq_A          148 NDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFI  198 (638)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSC
T ss_pred             ecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceee
Confidence            76 456788889999999888875  4778999997  6888988888654

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=97.27  E-value=0.14  Score=54.07  Aligned_cols=86  Identities=13%  Similarity=0.033  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEE--CCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC
Q psy10063        498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGG--GQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP  575 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~--~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~  575 (894)
                      ..|+..++..++.......    .+..|++++++|+...  .++..            .|...++. |.....|..+.. 
T Consensus        88 ~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~------------~Iy~~~~d-Gs~~~~lt~~~~-  149 (302)
T 3s25_A           88 NSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDTQTAT------------SLYRIRID-GEEKKKIKNHYL-  149 (302)
T ss_dssp             EEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESSSSCE------------EEEEEETT-SCCCEEEESSCC-
T ss_pred             CeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecCCCCc------------eEEEEECC-CCCeEEEeCCCc-
Confidence            4567777766553333222    2346788999998876  23322            25555555 333344443432 


Q ss_pred             eEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10063        576 INSLAFHPDGKSYASGGE-DGFLISNTLSN  604 (894)
Q Consensus       576 V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~  604 (894)
                         ++|+++++.|+-.+. ...|.+.+++.
T Consensus       150 ---~~~~~~g~~iy~t~~g~~~Iy~~~l~g  176 (302)
T 3s25_A          150 ---FTCNTSDRYFYYNNPKNGQLYRYDTAS  176 (302)
T ss_dssp             ---CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred             ---eEeeEECCEEEEEeCCCceEEEEECCC
Confidence               446678888876654 45566655544

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.23  E-value=0.03  Score=60.13  Aligned_cols=153  Identities=10%  Similarity=0.102  Sum_probs=85.3

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEec--CCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDL--RMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~--~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ...++...+.++++.+++++++.+...+.++-+|-  .+.+.+.  .....                         .+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~-------------------------~~~~  209 (327)
T 2xbg_A          157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSR-------------------------RLHN  209 (327)
T ss_dssp             EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSS-------------------------CEEE
T ss_pred             eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCC-------------------------ccce
Confidence            33456678899999999888877755444444442  2222221  12222                         4566


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-----CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-----ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      +++.+++.+++ ++.+|.|++++...|+....+..     ...+.+++|.+++..++++ .++.+               
T Consensus       210 ~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i---------------  272 (327)
T 2xbg_A          210 MGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL---------------  272 (327)
T ss_dssp             EEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE---------------
T ss_pred             eEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE---------------
Confidence            66666665443 44567666654333443333321     2358899999877766554 45542               


Q ss_pred             EEeccccceEEEcc---CCCCCeEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10063        557 FYHLIFEEEFARIK---GHFGPINSLAFHPDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       557 vwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwd  601 (894)
                      ++....|+.-..+.   .+...+.+|.|..++. ++.++.+|.|..++
T Consensus       273 ~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          273 LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence            12222233323332   2345678898876554 66667788776665

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.20  E-value=0.062  Score=58.35  Aligned_cols=94  Identities=17%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CccceeeeeccCccEEEecCCCeEEEE-------E------ecCCCCEEEEEEccC---CCEEEEecC----C----CcE
Q psy10063        378 LSVDRLNSMSPAARKLATNAEPVVKMQ-------V------TDQSAKITSLLWGNL---DQYIITGHA----K----GDI  433 (894)
Q Consensus       378 ~~~~~~~~~s~dg~~l~~~~~~~~~~~-------l------~~H~~~V~~l~~spd---g~~L~sgs~----D----g~I  433 (894)
                      ....+.++|.+||++++......+.+.       +      .........|+|+|+   +.+|+.+..    +    ..|
T Consensus        28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v  107 (354)
T 3a9g_A           28 LEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV  107 (354)
T ss_dssp             CSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred             CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence            334455667777776665544333221       1      112356889999998   555554432    2    567


Q ss_pred             EEEecCCC-------eEE-EEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063        434 CTWDLRMG-------REL-ESISGHAKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       434 ~iWd~~tg-------~~~-~~l~~h~~~~V~~v~~spdg~~la~~~  471 (894)
                      ..|++..+       +.+ ..+.....-....|+|.|||.++++.+
T Consensus       108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred             EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence            77877654       111 223211100346799999998777644

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.06  E-value=0.15  Score=54.74  Aligned_cols=52  Identities=12%  Similarity=0.114  Sum_probs=28.4

Q ss_pred             CCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc------cC--CCceeeeEECcCCcEE
Q psy10063        574 GPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI------SE--GSFTSSSTQQPDGLVY  626 (894)
Q Consensus       574 ~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~------~~--~~~v~~~~~spdg~~l  626 (894)
                      .....|+|. +|..++..-..+.|....++....+      ..  ...+..++..|||.++
T Consensus       263 ~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ly  322 (347)
T 3das_A          263 ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLW  322 (347)
T ss_dssp             CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEE
T ss_pred             CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEE
Confidence            356677776 4665665555566666666544211      11  1235556666666544

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.02  E-value=0.56  Score=51.20  Aligned_cols=70  Identities=11%  Similarity=-0.094  Sum_probs=50.0

Q ss_pred             eecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063        807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       807 fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      .|+.-..++....-+    -|++||+++|.++..-+-..+.|..-+......-++.....|.|.--.+++..++
T Consensus       266 vs~kygviyviTK~G----~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv  335 (494)
T 1bpo_A          266 ISEKHDVVFLITKYG----YIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII  335 (494)
T ss_dssp             EETTTTEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred             ecccCCEEEEEecCc----eEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence            455555555555554    5999999999999877777777876666666555666668888887777766554

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.94  E-value=0.07  Score=57.93  Aligned_cols=55  Identities=18%  Similarity=0.258  Sum_probs=35.3

Q ss_pred             CCeEEEEEec-------CCCEEEEEeCCCcEEEEECCCCcccc-------CCCceeeeEECcCCcEEEe
Q psy10063        574 GPINSLAFHP-------DGKSYASGGEDGFLISNTLSNGLDIS-------EGSFTSSSTQQPDGLVYPS  628 (894)
Q Consensus       574 ~~V~~l~~sp-------dg~~l~sgs~Dg~I~vwdl~~~~~~~-------~~~~v~~~~~spdg~~l~~  628 (894)
                      ..+..++|..       +|.+|++.-..+.|...+++.++...       ....+..+++.|||.+++.
T Consensus       271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~  339 (353)
T 2g8s_A          271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVL  339 (353)
T ss_dssp             CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEE
T ss_pred             cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEE
Confidence            4567788863       46677766667778888776543211       1235667888888876653

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.81  E-value=0.12  Score=54.27  Aligned_cols=27  Identities=26%  Similarity=0.402  Sum_probs=19.6

Q ss_pred             eCCcEEEEecCCC-----cEEEEecCcccccc
Q psy10063        855 PDGKSYASGGEDG-----FVRLHTFDQAYFDY  881 (894)
Q Consensus       855 pdg~~LaS~s~Dg-----~V~vWdl~~~~~~~  881 (894)
                      -++++++.||.++     .|.+||++..+...
T Consensus       250 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  281 (302)
T 2xn4_A          250 VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV  281 (302)
T ss_dssp             ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             ECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence            3678888888664     48889988776654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.71  E-value=0.06  Score=57.53  Aligned_cols=146  Identities=16%  Similarity=0.180  Sum_probs=87.9

Q ss_pred             CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCC---EEEEEE-
Q psy10063        420 LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDAT---MFITAS-  495 (894)
Q Consensus       420 dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~---~L~sgs-  495 (894)
                      ...+++.....+-|.|||+ .|+.++.+..  + .+..|.+-|                  .+.+  .|+   ++++.. 
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g-~~nnVD~r~------------------~~~l--~g~~~dla~as~R   94 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--G-KLNNVDIRY------------------DFPL--NGKKVDIAAASNR   94 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--S-CEEEEEEEE------------------EEEE--TTEEEEEEEEEEC
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--C-CcccEEEec------------------cccc--CCceEeEEEEeCC
Confidence            3445665566778999999 7999988864  2 455555433                  1111  222   222233 


Q ss_pred             C--CCCEEEEEcC--CCcEEEEEe-------CC-CCeeEEEE--cCC-CC-EEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        496 K--DHTAKLFTTH--DRQLLKTYT-------TE-RPVNSAAL--SPI-LP-HVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       496 ~--Dg~V~iwdl~--~~~~~~~~~-------~~-~~v~~l~~--spd-g~-~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      .  +..|+||++.  .++ +..+.       .. ..++.+|+  ++. ++ ++++...++.+..|           ++.+
T Consensus        95 ~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~-----------~l~~  162 (355)
T 3amr_A           95 SEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQY-----------ELKA  162 (355)
T ss_dssp             STTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEE-----------EEEE
T ss_pred             CCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEE-----------EEEe
Confidence            3  4789999773  343 44442       22 56777888  774 44 56666666653332           2222


Q ss_pred             c----cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        560 L----IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       560 ~----~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                      .    ...+.++.|.. .+.+..|+..+...+|+.+-++..|..++.
T Consensus       163 ~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da  208 (355)
T 3amr_A          163 DKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSA  208 (355)
T ss_dssp             CTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred             CCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence            1    23456666654 357889999988889999999866555554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.70  E-value=0.15  Score=55.00  Aligned_cols=104  Identities=11%  Similarity=0.059  Sum_probs=61.8

Q ss_pred             cceEEEEEecCCCEEEEEEC---C------------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        477 EPINDMQFSKDATMFITASK---D------------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~---D------------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      .....+++.++|.+.++...   |            ..=+||.+..+++......-.....|+|+||++.|+++......
T Consensus       165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~  244 (355)
T 3sre_A          165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHK  244 (355)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred             CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCe
Confidence            56788899999887776531   1            12344444444444334444667899999999999988765432


Q ss_pred             EEEeccCccceeeEEEEeccc-cce--EEEccCCCCCeEEEEEec-CCCEEEEEeCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIF-EEE--FARIKGHFGPINSLAFHP-DGKSYASGGED  594 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~-~~~--~~~l~~h~~~V~~l~~sp-dg~~l~sgs~D  594 (894)
                                   |+.|++.. ++.  .+.+ ...+..-.+++.+ +|.+.+++..+
T Consensus       245 -------------I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          245 -------------IHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             -------------EEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred             -------------EEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence                         55555542 211  1122 1234566778887 47766655543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.70  E-value=0.098  Score=54.97  Aligned_cols=74  Identities=11%  Similarity=-0.056  Sum_probs=40.5

Q ss_pred             cCCCeEEEEecCCCC-ceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCC-----CcEEEEecCccccccc
Q psy10063        809 FDTTREVTTTSTKVG-KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-----GFVRLHTFDQAYFDYT  882 (894)
Q Consensus       809 ~dg~~l~~as~d~~g-~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~D-----g~V~vWdl~~~~~~~~  882 (894)
                      .+++.+++++.+..+ ..+|.+||+++.+-...-..........++.-++++++.||.+     ..|.+||++..+....
T Consensus       205 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~  284 (301)
T 2vpj_A          205 LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV  284 (301)
T ss_dssp             ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred             ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence            355555555444322 2258999998764332211111111112233478888888876     3578888887766544

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.56  E-value=0.079  Score=57.83  Aligned_cols=145  Identities=17%  Similarity=0.168  Sum_probs=92.6

Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc---------c
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYTTE-----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKV---------G  551 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~---------~  551 (894)
                      .+|..|+.+ .++.||.-++..+..-+.+...     ..+..+..+|+|++|++.+..+ +.|..+....         .
T Consensus        30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~-V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE-IFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE-EEEEECCTTCSCCCCHHHHH
T ss_pred             cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe-EEEEEecCccccCccccccc
Confidence            355555555 3577887787754445555543     3688899999999999987654 4554444111         1


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecC---CCEEEEEeCCCcEEEEECCCCccc----c----------CCCce
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPD---GKSYASGGEDGFLISNTLSNGLDI----S----------EGSFT  614 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spd---g~~l~sgs~Dg~I~vwdl~~~~~~----~----------~~~~v  614 (894)
                      ...++.|.+...+     ......|..+.|||-   |..|++-..|+.||+||+......    .          ....+
T Consensus       108 ~~q~~ty~l~~~~-----~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev  182 (452)
T 3pbp_A          108 AFQIFHYSIDEEE-----VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI  182 (452)
T ss_dssp             TTEEEEEEGGGCC-------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred             ccceeEEEcCCcc-----cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence            2334555544211     114678999999995   558999999999999999863311    0          01456


Q ss_pred             eeeEECcCCcEE--Ee--cCCeEEEEe
Q psy10063        615 SSSTQQPDGLVY--PS--QGGHIHSLS  637 (894)
Q Consensus       615 ~~~~~spdg~~l--~~--~~g~i~~~~  637 (894)
                      .+++|..+|.-+  .+  .+|.++.+.
T Consensus       183 ~S~~Fg~~~lTLYvl~~t~~GDIYAlc  209 (452)
T 3pbp_A          183 TDLEFSKDGLTLYCLNTTEGGDIFAFY  209 (452)
T ss_dssp             EEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred             EEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence            678888877544  33  567777665

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.54  E-value=0.25  Score=52.18  Aligned_cols=103  Identities=6%  Similarity=-0.139  Sum_probs=55.9

Q ss_pred             EEecCCCEEEEEE--CCCC--EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        483 QFSKDATMFITAS--KDHT--AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       483 ~~spdg~~L~sgs--~Dg~--V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      .|++++++|+...  .++.  |+..++......+...+..    ++|+++|+.|+..+....             .|.+.
T Consensus       110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~-------------~Iy~~  172 (302)
T 3s25_A          110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNG-------------QLYRY  172 (302)
T ss_dssp             EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTC-------------CEEEE
T ss_pred             EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCc-------------eEEEE
Confidence            5566777777665  3444  4444554333333333322    456888999988776221             15555


Q ss_pred             eccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC--cEEEEECCCCc
Q psy10063        559 HLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG--FLISNTLSNGL  606 (894)
Q Consensus       559 d~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg--~I~vwdl~~~~  606 (894)
                      ++..+.....+.+   .. .+.++|++++|+-...++  .|..-+++...
T Consensus       173 ~l~g~~~~~l~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~  218 (302)
T 3s25_A          173 DTASQSEALFYDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN  218 (302)
T ss_dssp             ETTTTEEEEEECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred             ECCCCCEEEEeCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence            5554443332222   22 234668999888776543  45555666544

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.50  E-value=0.095  Score=57.17  Aligned_cols=169  Identities=9%  Similarity=0.004  Sum_probs=90.0

Q ss_pred             ccCCCEEEEecCCCcEEEEecCCCeEEEEecCC--CC-CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE
Q psy10063        418 GNLDQYIITGHAKGDICTWDLRMGRELESISGH--AK-EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA  494 (894)
Q Consensus       418 spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h--~~-~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg  494 (894)
                      +.+|..|+.+- ++.||.-++..+...+.++..  -. ..|..+..+|+|.+||..+..     -..|.--|++..+...
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-----~V~Vv~LP~~~~~~~~  102 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-----EIFVMEVPWGYSNVED  102 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-----EEEEEECCTTCSCCCC
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-----eEEEEEecCccccCcc
Confidence            34555555553 356776666643333343322  11 146667777777777777653     2223333433322221


Q ss_pred             -E--CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCC---CCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        495 -S--KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPI---LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       495 -s--~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spd---g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                       +  .--.++-|.+...+    .....+|..+.|+|-   |..|++-..++.+++|++......-.    ++........
T Consensus       103 ~~~~~~~q~~ty~l~~~~----~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~----~L~k~~~~fg  174 (452)
T 3pbp_A          103 VSIQDAFQIFHYSIDEEE----VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI----VLNKPNNSFG  174 (452)
T ss_dssp             HHHHHTTEEEEEEGGGCC------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE----EESCCCSEEE
T ss_pred             cccccccceeEEEcCCcc----cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc----chhccccccC
Confidence             0  00123444443211    113578999999996   46899999999866666554322111    1211111122


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEe--CCCcEEEE
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGG--EDGFLISN  600 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs--~Dg~I~vw  600 (894)
                      +..+...|.+++|..++-.|+..+  +.|.|+-.
T Consensus       175 ~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          175 LDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             SCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             CCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence            334456788999998777666655  66776543

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.48  E-value=0.1  Score=58.92  Aligned_cols=63  Identities=6%  Similarity=-0.010  Sum_probs=43.2

Q ss_pred             ceEEEEEecC-CCEEEEEECCCCEEEEEcC-------CCcE-----------E-EEEeC--CCCeeEEEEcCCCCEEEEE
Q psy10063        478 PINDMQFSKD-ATMFITASKDHTAKLFTTH-------DRQL-----------L-KTYTT--ERPVNSAALSPILPHVVLG  535 (894)
Q Consensus       478 ~V~~l~~spd-g~~L~sgs~Dg~V~iwdl~-------~~~~-----------~-~~~~~--~~~v~~l~~spdg~~l~~~  535 (894)
                      ....++++|+ +.++++-..++.|..+|+.       ++..           + ..+..  ......|+|+|+|++|+++
T Consensus       248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva  327 (496)
T 3kya_A          248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG  327 (496)
T ss_dssp             CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence            3457788884 5555555677889999987       5554           2 22332  3557899999999988887


Q ss_pred             ECCCC
Q psy10063        536 GGQEA  540 (894)
Q Consensus       536 ~~~~~  540 (894)
                      .....
T Consensus       328 D~~~h  332 (496)
T 3kya_A          328 VINNH  332 (496)
T ss_dssp             ETTTT
T ss_pred             eCCCC
Confidence            76554

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.47  E-value=0.22  Score=52.37  Aligned_cols=27  Identities=11%  Similarity=0.092  Sum_probs=18.8

Q ss_pred             CCcEEEEecCC-----CcEEEEecCccccccc
Q psy10063        856 DGKSYASGGED-----GFVRLHTFDQAYFDYT  882 (894)
Q Consensus       856 dg~~LaS~s~D-----g~V~vWdl~~~~~~~~  882 (894)
                      ++++++.||.+     ..|.+||++..+....
T Consensus       247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~  278 (306)
T 3ii7_A          247 GSIVYVLAGFQGVGRLGHILEYNTETDKWVAN  278 (306)
T ss_dssp             TTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred             CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence            67778888754     4578888877765543

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.31  E-value=0.72  Score=49.80  Aligned_cols=92  Identities=9%  Similarity=0.033  Sum_probs=48.5

Q ss_pred             cceeeeeccCcc-EEEecCCCeEEEEE----------------ecCCCCEEEEEEccC---CCEEEEec-C-------CC
Q psy10063        380 VDRLNSMSPAAR-KLATNAEPVVKMQV----------------TDQSAKITSLLWGNL---DQYIITGH-A-------KG  431 (894)
Q Consensus       380 ~~~~~~~s~dg~-~l~~~~~~~~~~~l----------------~~H~~~V~~l~~spd---g~~L~sgs-~-------Dg  431 (894)
                      ..+.++|.+||+ +++......+.+.-                ....+....|+|+|+   +.+|+.+. .       ..
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~   98 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT   98 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence            345567777777 66655444333211                011245689999996   45554442 2       22


Q ss_pred             cEEEEecCCC--e--EEEE-ecCC------CCCCeeEEEEcCCCCEEEEEeC
Q psy10063        432 DICTWDLRMG--R--ELES-ISGH------AKEPINDMQFSKDATMFITASH  472 (894)
Q Consensus       432 ~I~iWd~~tg--~--~~~~-l~~h------~~~~V~~v~~spdg~~la~~~~  472 (894)
                      .|..|++..+  +  ..+. +...      .. ....|+|.|||.++++.+.
T Consensus        99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h-~~~~l~~~pdG~Lyv~~Gd  149 (353)
T 2g8s_A           99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH-FGGRLVFDGKGYLFIALGE  149 (353)
T ss_dssp             EEEEEEECTTSSBEEEEEEEEECSSCCBSSSC-CCCCEEECSSSEEEEEECC
T ss_pred             EEEEEEECCCCCCCCceEEEEEECCCCCCCcc-cCccEEECCCCcEEEEECC
Confidence            5666766533  1  1121 2111      11 2457999999966665443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=95.96  E-value=0.61  Score=49.04  Aligned_cols=71  Identities=15%  Similarity=0.097  Sum_probs=39.0

Q ss_pred             CCCeEEEEecCCCC-ceeEEEeecCCcceee--eccCCCCCeeEEEEeeCCcEEEEecCCC-----cEEEEecCcccccc
Q psy10063        810 DTTREVTTTSTKVG-KFDARFYHLIFEEEFA--RIKGHFGPINSLAFHPDGKSYASGGEDG-----FVRLHTFDQAYFDY  881 (894)
Q Consensus       810 dg~~l~~as~d~~g-~~~I~vwd~~tg~~l~--~l~gH~~~V~~l~fSpdg~~LaS~s~Dg-----~V~vWdl~~~~~~~  881 (894)
                      +++.++.++.+... ..+|.+||+++.+-..  .+....... +++ .-++++++.||.++     .|.+||++..+...
T Consensus       215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  292 (308)
T 1zgk_A          215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GIT-VHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE  292 (308)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEE-EECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence            55545554443221 1258999998764332  222111111 222 23788888888653     57888888776654


Q ss_pred             c
Q psy10063        882 T  882 (894)
Q Consensus       882 ~  882 (894)
                      .
T Consensus       293 ~  293 (308)
T 1zgk_A          293 V  293 (308)
T ss_dssp             E
T ss_pred             c
Confidence            4

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.92  E-value=0.11  Score=54.68  Aligned_cols=174  Identities=10%  Similarity=0.063  Sum_probs=86.1

Q ss_pred             cCCCEEEEecCC-----CcEEEEecCCCe---EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--cceE--------
Q psy10063        419 NLDQYIITGHAK-----GDICTWDLRMGR---ELESISGHAKEPINDMQFSKDATMFITASHSQAV--EPIN--------  480 (894)
Q Consensus       419 pdg~~L~sgs~D-----g~I~iWd~~tg~---~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--~~V~--------  480 (894)
                      -++++++.|+.+     ..+.+||+.+.+   ....-..... .-...+..-+++.++.|+.++..  ..+.        
T Consensus        61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~  139 (301)
T 2vpj_A           61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ  139 (301)
T ss_dssp             ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence            357777788755     368999988765   3322111111 11112222266777777654432  0010        


Q ss_pred             -------------EEEEecCCCEEEEEECC-----CCEEEEEcCCCcEEEEEeCC-CC-eeEEEEcCCCCEEEEEECCCC
Q psy10063        481 -------------DMQFSKDATMFITASKD-----HTAKLFTTHDRQLLKTYTTE-RP-VNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       481 -------------~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~~~~~~~~-~~-v~~l~~spdg~~l~~~~~~~~  540 (894)
                                   ..+..-++++++.|+.+     ..|.+||+.+.+....-... .. -.+++. -+++.+++|+.++.
T Consensus       140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~  218 (301)
T 2vpj_A          140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGT  218 (301)
T ss_dssp             EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSS
T ss_pred             EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCC
Confidence                         01111256666776654     45888998877655432221 11 112222 24555566555432


Q ss_pred             eEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC
Q psy10063        541 REVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSNG  605 (894)
Q Consensus       541 ~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~~  605 (894)
                      ..         .-++.+||+...+....  +.........+.  -++++++.|+.++     .|.+||++..
T Consensus       219 ~~---------~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          219 AH---------LSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             SB---------CCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             cc---------cceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            10         12377788776654432  211111222222  2677777777553     4677777654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=95.83  E-value=0.98  Score=47.77  Aligned_cols=112  Identities=13%  Similarity=0.160  Sum_probs=61.6

Q ss_pred             CEEEEEE---ccCCCEEEEec-------------CCCcEEEEecC---CCeEEEEecCC------------CCCCeeEEE
Q psy10063        411 KITSLLW---GNLDQYIITGH-------------AKGDICTWDLR---MGRELESISGH------------AKEPINDMQ  459 (894)
Q Consensus       411 ~V~~l~~---spdg~~L~sgs-------------~Dg~I~iWd~~---tg~~~~~l~~h------------~~~~V~~v~  459 (894)
                      .+..|.|   .|+++++++..             .+..|..||+.   +++.+..+...            .......|+
T Consensus        64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva  143 (334)
T 2p9w_A           64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA  143 (334)
T ss_dssp             EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred             eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence            4689999   68887777543             25779999998   77765544311            111244555


Q ss_pred             EcCCCCEEEEEeCC-CCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECC
Q psy10063        460 FSKDATMFITASHS-QAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       460 ~spdg~~la~~~~d-~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~  538 (894)
                      +.++|...++++.. +.   |  +.++|||+.         +..|.+....    .........|++.|+|..|++....
T Consensus       144 vD~~GnaYVt~s~~~~~---I--~rV~pdG~~---------~~~~~~~~~~----~~~~~G~nGIv~~pdg~~Liv~~~~  205 (334)
T 2p9w_A          144 QDRDGNSYVAFALGMPA---I--ARVSADGKT---------VSTFAWESGN----GGQRPGYSGITFDPHSNKLIAFGGP  205 (334)
T ss_dssp             ECTTSCEEEEEEESSCE---E--EEECTTSCC---------EEEEEECCCC----SSSCCSCSEEEEETTTTEEEEESSS
T ss_pred             ECCCCCEEEeCCCCCCe---E--EEEeCCCCE---------EeeeeecCCC----cccccCcceEEEeCCCCEEEEEcCC
Confidence            55555544444332 11   1  122333321         2233322110    0011346799999999999998876


Q ss_pred             CC
Q psy10063        539 EA  540 (894)
Q Consensus       539 ~~  540 (894)
                      +.
T Consensus       206 g~  207 (334)
T 2p9w_A          206 RA  207 (334)
T ss_dssp             SS
T ss_pred             Ce
Confidence            55

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.80  E-value=0.34  Score=50.77  Aligned_cols=172  Identities=9%  Similarity=0.039  Sum_probs=86.1

Q ss_pred             CCCEEEEecCC-----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------------
Q psy10063        420 LDQYIITGHAK-----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV------------------  476 (894)
Q Consensus       420 dg~~L~sgs~D-----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------  476 (894)
                      ++++++.|+.+     ..+.+||+.+.+....-..... .....+..-+++.++.|+.++..                  
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~  139 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR-RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV  139 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc-ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence            67777888755     3588999988765433221111 11112222367777777765432                  


Q ss_pred             ------cceEEEEEecCCCEEEEEECC-------CCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        477 ------EPINDMQFSKDATMFITASKD-------HTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       477 ------~~V~~l~~spdg~~L~sgs~D-------g~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                            +.-.+++. -++++++.|+.+       ..|.+||+.+.+....-..  ...-.+++. -+++.+++|+.++..
T Consensus       140 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~  217 (302)
T 2xn4_A          140 APMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPL  217 (302)
T ss_dssp             CCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSS
T ss_pred             CCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCc
Confidence                  00011111 245566666542       3588899887765443221  111122222 245666666554321


Q ss_pred             EEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC
Q psy10063        542 EVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSNG  605 (894)
Q Consensus       542 ~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~~  605 (894)
                               ..-++.+||+...+....  +.........+.  -++++++.|+.++     .|.+||++..
T Consensus       218 ---------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          218 ---------VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             ---------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             ---------ccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence                     011377788776554332  111111112222  2677777777553     3778887654

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.77  E-value=2.1  Score=44.87  Aligned_cols=44  Identities=11%  Similarity=0.088  Sum_probs=26.5

Q ss_pred             EEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEEC
Q psy10063        491 FITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       491 L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~  537 (894)
                      ++.|+  ..+.+||..+++... ....   .+....+...+++.+++|+.
T Consensus         8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~   54 (315)
T 4asc_A            8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGL   54 (315)
T ss_dssp             EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEE
T ss_pred             EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCc
Confidence            44444  578999999887543 3321   23334444557777777773

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=95.73  E-value=1.6  Score=46.84  Aligned_cols=130  Identities=16%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             CCCEEEEEEcc--CCC-EEEEe-cC--CCcEEEEecCCC----eEEEEecCCCCCCeeEEEEcCCCCEEEEEeC---C--
Q psy10063        409 SAKITSLLWGN--LDQ-YIITG-HA--KGDICTWDLRMG----RELESISGHAKEPINDMQFSKDATMFITASH---S--  473 (894)
Q Consensus       409 ~~~V~~l~~sp--dg~-~L~sg-s~--Dg~I~iWd~~tg----~~~~~l~~h~~~~V~~v~~spdg~~la~~~~---d--  473 (894)
                      ......|.+.+  +|. +|+.+ ..  +..|.||+++.+    ..+..+.+..-.....+++.++|.++++...   +  
T Consensus       111 ~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~  190 (355)
T 3sre_A          111 SFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPY  190 (355)
T ss_dssp             GCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHH
T ss_pred             ceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcc
Confidence            35778888776  454 45444 22  467888887653    2345555544446889999999987665431   0  


Q ss_pred             ------------CCc---------------cceEEEEEecCCCEEEEEE-CCCCEEEEEcCC-CcE--EEEEeCCCCeeE
Q psy10063        474 ------------QAV---------------EPINDMQFSKDATMFITAS-KDHTAKLFTTHD-RQL--LKTYTTERPVNS  522 (894)
Q Consensus       474 ------------~~i---------------~~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~-~~~--~~~~~~~~~v~~  522 (894)
                                  +.+               ..-..|+|+||++.|+.+. ..+.|+.|++.. +++  .+.+...+..-.
T Consensus       191 ~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDG  270 (355)
T 3sre_A          191 LKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDN  270 (355)
T ss_dssp             HHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEE
T ss_pred             cccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCce
Confidence                        111               2456789999998877765 568899999863 433  234444566788


Q ss_pred             EEEcC-CCCEEEEEECC
Q psy10063        523 AALSP-ILPHVVLGGGQ  538 (894)
Q Consensus       523 l~~sp-dg~~l~~~~~~  538 (894)
                      +++.+ +|.+.+++..+
T Consensus       271 i~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          271 ISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             EEECTTTCCEEEEEESC
T ss_pred             EEEeCCCCcEEEEecCC
Confidence            99999 58876655544

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.59  E-value=5.6  Score=47.53  Aligned_cols=203  Identities=13%  Similarity=0.121  Sum_probs=110.0

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec----CCCCCCeeEEEEcCCCCEEEEEeCCCCc---------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS----GHAKEPINDMQFSKDATMFITASHSQAV---------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~----~h~~~~V~~v~~spdg~~la~~~~d~~i---------  476 (894)
                      ..|.++.. .+| .|..|..+ -|.++|..+++.. .+.    +.....|.++....+|.+.+.. ..|-.         
T Consensus       103 ~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~  177 (758)
T 3ott_A          103 TDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGT-YNGLCRYIPSNGKF  177 (758)
T ss_dssp             SCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEE-TTEEEEEETTTTEE
T ss_pred             ceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEe-CCCHhhCccCCCce
Confidence            35777754 355 55556555 5888998766543 331    1112267888777777655432 22211         


Q ss_pred             -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063        477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT-TERPVNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                                   ..|.+|....++..|..|.. +-|..+|...++...... ....|.++....+|.+.+ |...|   
T Consensus       178 ~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~G---  252 (758)
T 3ott_A          178 EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDNG---  252 (758)
T ss_dssp             EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETTE---
T ss_pred             EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCCc---
Confidence                         12677777776665555554 458888987765443221 134578888877776544 44443   


Q ss_pred             EEeccCccceeeEEEEeccccceEEEcc-------CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCcc-c------
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEEEFARIK-------GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLD-I------  608 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~~~~~l~-------~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~-~------  608 (894)
                                  +.+++...++......       -....|.+|....+|.+ ..|...| |.++....... .      
T Consensus       253 ------------l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~G-l~~~~~~~~~~~~~~~~~~  318 (758)
T 3ott_A          253 ------------LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNI-WLGTDYG-ISLSRYNSALQFIPISQIT  318 (758)
T ss_dssp             ------------EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCE-EEEESSS-EEEECCCC-CEEEEHHHHS
T ss_pred             ------------eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCE-EEEeCCc-ccccccCCceeEEecccCC
Confidence                        5556555443322111       12346889988877764 4445556 55443322111 0      


Q ss_pred             --cCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        609 --SEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       609 --~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                        .....+.++....+|.+.....+-+..+
T Consensus       319 ~~~~~~~v~~i~~D~~g~lWiGt~~Gl~~~  348 (758)
T 3ott_A          319 GTGDGNQFYSLFRDSKGFYWFGGANGLIRF  348 (758)
T ss_dssp             CSCCCCBEEEEEECTTCCEEEEETTEEEEE
T ss_pred             CCCCCceEEEEEEcCCCCEEEeeCCcceee
Confidence              1133566677777776654444444444

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=95.55  E-value=0.2  Score=52.73  Aligned_cols=172  Identities=6%  Similarity=0.070  Sum_probs=87.3

Q ss_pred             CCCEEEEecCC----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC-CCc--cce-------------
Q psy10063        420 LDQYIITGHAK----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS-QAV--EPI-------------  479 (894)
Q Consensus       420 dg~~L~sgs~D----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d-~~i--~~V-------------  479 (894)
                      ++++++.|+.+    ..+.+||+.+.+....-..... .....+..-++++++.|+.+ +..  ..+             
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~  133 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP-RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK  133 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC-CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc-ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence            66777788755    5688999988765433221111 22222222367777777765 211  001             


Q ss_pred             ---------EEEEEecCCCEEEEEEC---------CCCEEEEEcCCCcEEEEEeCC-CC-eeEEEEcCCCCEEEEEECCC
Q psy10063        480 ---------NDMQFSKDATMFITASK---------DHTAKLFTTHDRQLLKTYTTE-RP-VNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       480 ---------~~l~~spdg~~L~sgs~---------Dg~V~iwdl~~~~~~~~~~~~-~~-v~~l~~spdg~~l~~~~~~~  539 (894)
                               .+++. -++++++.|+.         -..+.+||+.+.+....-... .. -.+++.. +++.+++|+.++
T Consensus       134 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~  211 (306)
T 3ii7_A          134 PSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNG  211 (306)
T ss_dssp             CCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEET
T ss_pred             CCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCC
Confidence                     11111 24556666653         345889999877654432221 11 1222222 555566655433


Q ss_pred             CeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCC-----CcEEEEECCCC
Q psy10063        540 AREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGED-----GFLISNTLSNG  605 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~D-----g~I~vwdl~~~  605 (894)
                      ...         .-++.+||+...+....  +........++.+  ++++++.|+.+     ..|.+||++..
T Consensus       212 ~~~---------~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          212 LGG---------LDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             TEE---------BCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             CCC---------CceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence            210         11377788776544332  2222222233333  67778888754     34777777654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=95.45  E-value=0.27  Score=55.30  Aligned_cols=74  Identities=9%  Similarity=-0.070  Sum_probs=54.6

Q ss_pred             cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcc------e-------eeeccCCCCCeeEEEEeeCCcEEEEecCC
Q psy10063        800 LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEE------E-------FARIKGHFGPINSLAFHPDGKSYASGGED  866 (894)
Q Consensus       800 ~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~------~-------l~~l~gH~~~V~~l~fSpdg~~LaS~s~D  866 (894)
                      .....+-++|||+++++++.-..   .|.|+|++.-.      +       +..++... .....+|.++|.-..+.-.|
T Consensus       323 ksPHGv~vsPDGkyi~v~GKLsp---tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-GPlHt~Fd~~G~aYTtlfid  398 (638)
T 3sbq_A          323 KNPHGCNTSSDGKYFIAAGKLSP---TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-GPLHTTFDGRGNAYTTLFID  398 (638)
T ss_dssp             SSCCCEEECTTSCEEEEECTTSS---BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-CEEEEEECSSSEEEEEETTT
T ss_pred             CCCcceeeCCCCCEEEEcCCCCC---eEEEEEeehhhhhhhccccCcccceEeeccCCC-cccEEEECCCCceEeeeeec
Confidence            34556789999999998877654   69999987421      1       23333333 34589999999777788899


Q ss_pred             CcEEEEecCcc
Q psy10063        867 GFVRLHTFDQA  877 (894)
Q Consensus       867 g~V~vWdl~~~  877 (894)
                      ..|..|+++..
T Consensus       399 SqvvkWni~~a  409 (638)
T 3sbq_A          399 SQVVKWNMEEA  409 (638)
T ss_dssp             TEEEEEEHHHH
T ss_pred             ceEEEEeccHH
Confidence            99999999765

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=95.30  E-value=1.4  Score=49.28  Aligned_cols=55  Identities=24%  Similarity=0.328  Sum_probs=34.0

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE--EEecC-----CCCCCeeEEEEcCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL--ESISG-----HAKEPINDMQFSKD  463 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~--~~l~~-----h~~~~V~~v~~spd  463 (894)
                      -...++|+|.|||+++++-...+.|++++...|+..  ..+..     .....+..|+|+||
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd   87 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence            446679999999987776554457888876655432  22221     01125667777774

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.25  E-value=2.6  Score=47.13  Aligned_cols=20  Identities=15%  Similarity=0.278  Sum_probs=14.6

Q ss_pred             ceEEEEEecCCCEEEEEECC
Q psy10063        478 PINDMQFSKDATMFITASKD  497 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~D  497 (894)
                      ....|+|.|||.+.++.+..
T Consensus       140 ~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C          140 LGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             CEEEEEECTTSCEEEEECCT
T ss_pred             cCCcEeECCCCcEEEEeCCC
Confidence            45678899999877766543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=95.23  E-value=4.5  Score=44.24  Aligned_cols=128  Identities=10%  Similarity=0.106  Sum_probs=84.9

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      +.-.+|..+.||.-. ...|.|||+++.+.++.+.-...                          |..-.|-.+. .|+.
T Consensus        70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~--------------------------VvfWkWis~~-~l~l  121 (494)
T 1bpo_A           70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--------------------------VTFWKWISLN-TVAL  121 (494)
T ss_dssp             EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC--------------------------CCEEEEEETT-EEEE
T ss_pred             eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC--------------------------ceEEEecCCC-eEEE
Confidence            455678888887765 56899999999998888876653                          4444554433 3444


Q ss_pred             EECCCCEEEEEcCC-CcEEEEEeC-----CCCeeEEEEcCCCCEEEEEEC---CCCeEEEeccCccceeeEEEEeccccc
Q psy10063        494 ASKDHTAKLFTTHD-RQLLKTYTT-----ERPVNSAALSPILPHVVLGGG---QEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       494 gs~Dg~V~iwdl~~-~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~~---~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      .. +..|+-|++.. ..+++.|..     ...|.....+++.++++..|-   ++.+          ...+.+|..+. +
T Consensus       122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v----------~G~mQLYS~er-~  189 (494)
T 1bpo_A          122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV----------VGAMQLYSVDR-K  189 (494)
T ss_dssp             EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEE----------EEEEEEEESTT-C
T ss_pred             Ec-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcc----------cceEEEeeccc-c
Confidence            43 56799999974 456677764     346788888999999887663   2211          11277887774 3


Q ss_pred             eEEEccCCCCCeEEEEE
Q psy10063        565 EFARIKGHFGPINSLAF  581 (894)
Q Consensus       565 ~~~~l~~h~~~V~~l~~  581 (894)
                      .-+.+.||.+....+.+
T Consensus       190 ~sQ~ieGhaa~F~~~~~  206 (494)
T 1bpo_A          190 VSQPIEGHAASFAQFKM  206 (494)
T ss_dssp             CEEEECCSEEEEEEEEC
T ss_pred             ccchheeeeeeeEEEec
Confidence            44567788665544443

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.94  E-value=0.31  Score=48.26  Aligned_cols=140  Identities=12%  Similarity=0.005  Sum_probs=80.2

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcE------EEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCc
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQL------LKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTK  549 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~------~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~  549 (894)
                      .+.+|+|+|+|.+.++  .+|.|+-.+..+.+.      -..+..  -....++.|.++|.+.++  .++.         
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~---------  108 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK---------  108 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTE---------
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCE---------
Confidence            6789999999986666  667665555544211      122221  123589999999988777  4464         


Q ss_pred             cceeeEEEEeccccc-------eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCc---------ccc--CC
Q psy10063        550 VGKFDARFYHLIFEE-------EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL---------DIS--EG  611 (894)
Q Consensus       550 ~~~~~v~vwd~~~~~-------~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~---------~~~--~~  611 (894)
                           |..++-.+..       ....-.+--..+..|.|.|+|.+.+..  |+.++-+......         .+.  .-
T Consensus       109 -----iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~  181 (236)
T 1tl2_A          109 -----LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGW  181 (236)
T ss_dssp             -----EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSG
T ss_pred             -----EEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCc
Confidence                 3333321110       011111122467899999999865555  7776544332111         111  11


Q ss_pred             CceeeeEECcCCcEEEecCCeEEEEe
Q psy10063        612 SFTSSSTQQPDGLVYPSQGGHIHSLS  637 (894)
Q Consensus       612 ~~v~~~~~spdg~~l~~~~g~i~~~~  637 (894)
                      .....+.|.++|.++...+|++....
T Consensus       182 ~~yr~l~f~~~G~l~~v~~g~~Y~~~  207 (236)
T 1tl2_A          182 DTFKFLFFSSVGTLFGVQGGKFYEDY  207 (236)
T ss_dssp             GGEEEEEECTTSCEEEEETTEEEEES
T ss_pred             ceEEEEEECCCCcEEEEeCCeEEecC
Confidence            23445678999988866677766664

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=94.85  E-value=1.6  Score=46.82  Aligned_cols=58  Identities=9%  Similarity=-0.079  Sum_probs=31.0

Q ss_pred             eEEEeecCCcc--eeeeccCCCCCeeEEEEeeCCcEEEEecCCC------cEEEEecCcccccccccc
Q psy10063        826 DARFYHLIFEE--EFARIKGHFGPINSLAFHPDGKSYASGGEDG------FVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       826 ~I~vwd~~tg~--~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg------~V~vWdl~~~~~~~~~~~  885 (894)
                      .+.+||+++.+  .+..+......  ..++..++++++.||.++      .|.+++++.++++....+
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~  351 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE  351 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred             eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence            47888887653  33333222222  223445789999998654      355568888777665443

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.72  E-value=0.85  Score=45.13  Aligned_cols=81  Identities=5%  Similarity=0.007  Sum_probs=54.9

Q ss_pred             CeeEEEEcCCCCEEEEEeCCCCc-----------------cce--------EEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063        454 PINDMQFSKDATMFITASHSQAV-----------------EPI--------NDMQFSKDATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       454 ~V~~v~~spdg~~la~~~~d~~i-----------------~~V--------~~l~~spdg~~L~sgs~Dg~V~iwdl~~~  508 (894)
                      .+.+++|+|+|.+.++  .++.+                 ..|        .++.|.++|.+.++  .||.|+-|+-.+.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            6789999999987776  44433                 233        78889999987777  5688877765321


Q ss_pred             cEE------EEE-eCC-CCeeEEEEcCCCCEEEEEECCCC
Q psy10063        509 QLL------KTY-TTE-RPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       509 ~~~------~~~-~~~-~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      ..-      ..+ .+. ..+.+|.|.|+|.+.++.  ++.
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~  155 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ  155 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence            110      111 112 568999999999877777  554

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.32  E-value=6  Score=41.38  Aligned_cols=72  Identities=14%  Similarity=0.008  Sum_probs=39.6

Q ss_pred             cCCCeEEEEecCCCCc-eeEEEeecCCccee--eeccCCCCCeeEEEEeeCCcEEEEecCCC--------------cEEE
Q psy10063        809 FDTTREVTTTSTKVGK-FDARFYHLIFEEEF--ARIKGHFGPINSLAFHPDGKSYASGGEDG--------------FVRL  871 (894)
Q Consensus       809 ~dg~~l~~as~d~~g~-~~I~vwd~~tg~~l--~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg--------------~V~v  871 (894)
                      .+++.++.++.+..+. ..|.+||+++.+-.  ..+.......  .+..-++++++.||.++              .|.+
T Consensus       205 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~  282 (318)
T 2woz_A          205 HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI--SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK  282 (318)
T ss_dssp             ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC--EEEEETTEEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred             ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce--EEEEECCEEEEECCeeccCCCCceeccceeeeEEE
Confidence            4555555555443221 24889998876432  2222111111  22234678888887653              4778


Q ss_pred             EecCccccccc
Q psy10063        872 HTFDQAYFDYT  882 (894)
Q Consensus       872 Wdl~~~~~~~~  882 (894)
                      ||++..+....
T Consensus       283 yd~~~~~W~~~  293 (318)
T 2woz_A          283 YEDDKKEWAGM  293 (318)
T ss_dssp             EETTTTEEEEE
T ss_pred             EeCCCCEehhh
Confidence            88887766544

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=94.25  E-value=1.3  Score=46.57  Aligned_cols=96  Identities=11%  Similarity=0.093  Sum_probs=48.6

Q ss_pred             CCCEEEEEEC-C-----CCEEEEEcCCCcEEEEEeCC-CC-eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        487 DATMFITASK-D-----HTAKLFTTHDRQLLKTYTTE-RP-VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       487 dg~~L~sgs~-D-----g~V~iwdl~~~~~~~~~~~~-~~-v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      ++++++.|+. +     ..|.+||+.+.+....-... .. -.+++. -+++.+++|+.++...         .-++.+|
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~---------~~~~~~y  217 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGL---------TSSAEVY  217 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSE---------EEEEEEE
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCc---------cceEEEE
Confidence            4566667765 2     46889998877544322211 11 122222 2566677776554311         1137778


Q ss_pred             eccccceEEEc--cCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        559 HLIFEEEFARI--KGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       559 d~~~~~~~~~l--~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      |+.+.+....-  .........+.+  ++++++.|+.+
T Consensus       218 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~  253 (315)
T 4asc_A          218 SITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA  253 (315)
T ss_dssp             ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred             ECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence            87766544322  111112222222  66777777753

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.24  E-value=1.9  Score=45.37  Aligned_cols=168  Identities=13%  Similarity=0.108  Sum_probs=79.4

Q ss_pred             EEEEccCCCEEEEecC----CC-------cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC---Cc-cc
Q psy10063        414 SLLWGNLDQYIITGHA----KG-------DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ---AV-EP  478 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~----Dg-------~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~---~i-~~  478 (894)
                      +.+...++++++.|+.    ++       .+.+||+.+.+....-.......-.+++. -+++.++.|+.+.   .. ..
T Consensus        50 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~  128 (318)
T 2woz_A           50 SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDS  128 (318)
T ss_dssp             EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEE
T ss_pred             eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccce
Confidence            3344557788888873    12       17788888776543211111101112222 2667777777541   11 00


Q ss_pred             eE---------------------EEEEecCCCEEEEEEC------CCCEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCC
Q psy10063        479 IN---------------------DMQFSKDATMFITASK------DHTAKLFTTHDRQLLKTYTTE--RPVNSAALSPIL  529 (894)
Q Consensus       479 V~---------------------~l~~spdg~~L~sgs~------Dg~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg  529 (894)
                      +.                     ..+..-++++++.|+.      -..|.+||+.+.+....-...  ....+++. -++
T Consensus       129 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~  207 (318)
T 2woz_A          129 VLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKG  207 (318)
T ss_dssp             EEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT
T ss_pred             EEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECC
Confidence            00                     0111135566666653      235889999887654432221  11122222 256


Q ss_pred             CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       530 ~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      +.+++|+.++...         .-++.+||+.+.+....  +.........+.  -++++++.|+.+
T Consensus       208 ~iyv~GG~~~~~~---------~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~  263 (318)
T 2woz_A          208 KIVIAGGVTEDGL---------SASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFA  263 (318)
T ss_dssp             EEEEEEEEETTEE---------EEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred             EEEEEcCcCCCCc---------cceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEECCee
Confidence            6666666544311         12377788776654332  211111112222  356777777654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.23  E-value=8.6  Score=42.86  Aligned_cols=65  Identities=9%  Similarity=0.159  Sum_probs=37.6

Q ss_pred             CCCEEEEEEccC----CCEEEEecC--C----------CcEEEEecCC----------CeEEEEec--CCCCCCeeEEEE
Q psy10063        409 SAKITSLLWGNL----DQYIITGHA--K----------GDICTWDLRM----------GRELESIS--GHAKEPINDMQF  460 (894)
Q Consensus       409 ~~~V~~l~~spd----g~~L~sgs~--D----------g~I~iWd~~t----------g~~~~~l~--~h~~~~V~~v~~  460 (894)
                      .+....|+|+|+    +.+.++-+.  +          ..|.-|.+..          .+.+..+.  .... ....|+|
T Consensus        68 e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H-~g~~l~f  146 (463)
T 2wg3_C           68 ERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH-LGGQLLF  146 (463)
T ss_dssp             CCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS-CEEEEEE
T ss_pred             CCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc-cCCcEeE
Confidence            356788999996    443333221  1          1344466542          23343333  1112 5689999


Q ss_pred             cCCCCEEEEEeCCC
Q psy10063        461 SKDATMFITASHSQ  474 (894)
Q Consensus       461 spdg~~la~~~~d~  474 (894)
                      .|||.++++.+..+
T Consensus       147 gpDG~LYv~~Gd~~  160 (463)
T 2wg3_C          147 GPDGFLYIILGDGM  160 (463)
T ss_dssp             CTTSCEEEEECCTT
T ss_pred             CCCCcEEEEeCCCC
Confidence            99998888777644

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=94.06  E-value=0.2  Score=53.65  Aligned_cols=145  Identities=14%  Similarity=0.091  Sum_probs=79.8

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE-ECCCCE
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA-SKDHTA  500 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg-s~Dg~V  500 (894)
                      .+|+.++.||.|.-+|..+|+.+-+++.....++...   ...             .+     ..++..++.. ..||.|
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~---~~~-------------~~-----~~~~~~~vv~p~~dG~l   69 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEI---QEP-------------SR-----LETYETLIIEPFGDGNI   69 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEEC---CCS-------------CT-----TTSSEEEEECCSTTTEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEe---cCC-------------cc-----ccCCcEEEEEECCCCEE
Confidence            4789999999999999999999988875410011110   000             00     0123333333 579999


Q ss_pred             EEEEcCCCcEEEEEeCCCCee--EEEEc-----------CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE
Q psy10063        501 KLFTTHDRQLLKTYTTERPVN--SAALS-----------PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA  567 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~~~~~v~--~l~~s-----------pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~  567 (894)
                      ..++..+|.....+.....+.  -+...           -.+..+++++.++.              +...|+++|+.+.
T Consensus        70 ~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~--------------l~ald~~tG~~~W  135 (339)
T 2be1_A           70 YYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI--------------MYTINMLNGEIIS  135 (339)
T ss_dssp             EEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEE--------------EEEEETTTCCEEE
T ss_pred             EEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCE--------------EEEEECCCCcEEE
Confidence            999998886655554221110  01111           13556777777775              6677777787777


Q ss_pred             EccCCC--C-----CeEEEEEe-----cCCCEEEEEeCCCcEEEEE
Q psy10063        568 RIKGHF--G-----PINSLAFH-----PDGKSYASGGEDGFLISNT  601 (894)
Q Consensus       568 ~l~~h~--~-----~V~~l~~s-----pdg~~l~sgs~Dg~I~vwd  601 (894)
                      .+....  +     ...|....     ..+..|+.+..+..|.+.+
T Consensus       136 ~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~  181 (339)
T 2be1_A          136 AFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS  181 (339)
T ss_dssp             EESTTCBCC--------------------CCEEEEEEEEEECEECC
T ss_pred             EEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence            664321  1     01111111     1234677776666666655

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=93.83  E-value=3.3  Score=43.65  Aligned_cols=111  Identities=11%  Similarity=0.023  Sum_probs=63.6

Q ss_pred             CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        487 DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +..+|+..+..|.++...+...       .....+...+.+..+.....+..|++.+..|....+..+.      |+...
T Consensus       113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~e------v~~~g  186 (312)
T 1suu_A          113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRD------VRLTN  186 (312)
T ss_dssp             TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGG------SCBCC
T ss_pred             CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHH------ccccC
Confidence            4667888899999999887532       2222233356677766666667788888888643332221      11100


Q ss_pred             c-cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        560 L-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       560 ~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      - ..|.....+.. ...|.++....++..|+..+..|.++...++.
T Consensus       187 R~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e  231 (312)
T 1suu_A          187 RGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  231 (312)
T ss_dssp             TTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             CCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence            0 11222222322 34455655555566777788888888877754

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=93.57  E-value=0.6  Score=49.07  Aligned_cols=172  Identities=9%  Similarity=0.009  Sum_probs=84.2

Q ss_pred             CCCEEEEecC----C-----CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------
Q psy10063        420 LDQYIITGHA----K-----GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--------------  476 (894)
Q Consensus       420 dg~~L~sgs~----D-----g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------------  476 (894)
                      ++++++.|+.    +     ..+.+||+.+.+....-..... .....+..-+++.++.|+.++..              
T Consensus        70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  148 (308)
T 1zgk_A           70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE  148 (308)
T ss_dssp             TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred             CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence            6677777775    2     3688999887764332111111 11111222266777776644321              


Q ss_pred             ----------cceEEEEEecCCCEEEEEECC-----CCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCC
Q psy10063        477 ----------EPINDMQFSKDATMFITASKD-----HTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       477 ----------~~V~~l~~spdg~~L~sgs~D-----g~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                                +.-.+++.. ++++++.|+.+     ..|.+||+.+.+....-..  ...-.+++.. +++.+++|+.++
T Consensus       149 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~  226 (308)
T 1zgk_A          149 WHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDG  226 (308)
T ss_dssp             EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred             EeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCC
Confidence                      001111111 56666776654     4588899887654433221  1111222222 555666665543


Q ss_pred             CeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCC-----cEEEEECCCC
Q psy10063        540 AREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDG-----FLISNTLSNG  605 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg-----~I~vwdl~~~  605 (894)
                      ..         ...++.+||+...+....  +.........+.  -++++++.|+.++     .|.+||++..
T Consensus       227 ~~---------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          227 QD---------QLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             SS---------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             CC---------ccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence            21         112377888776654332  111111222222  2677777776543     4667776554

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=93.45  E-value=9.9  Score=40.93  Aligned_cols=58  Identities=14%  Similarity=0.051  Sum_probs=38.1

Q ss_pred             CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEE
Q psy10063        487 DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVT  544 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~  544 (894)
                      +..+|+.++..|.++...+...       .....+...+.+..+........|++.+..|....+
T Consensus       112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf  176 (370)
T 3l6v_A          112 DNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRF  176 (370)
T ss_dssp             TTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEE
T ss_pred             CCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEE
Confidence            4568999999999999886432       222223334566666666666778888888765443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=92.77  E-value=3.6  Score=48.71  Aligned_cols=180  Identities=9%  Similarity=0.068  Sum_probs=93.9

Q ss_pred             cCCCEEEEecCC----CcEEEEecCCCeEEEEe-c-----CCCCCCeeEEEEcC-CCCEEEEEeCCCCc-----------
Q psy10063        419 NLDQYIITGHAK----GDICTWDLRMGRELESI-S-----GHAKEPINDMQFSK-DATMFITASHSQAV-----------  476 (894)
Q Consensus       419 pdg~~L~sgs~D----g~I~iWd~~tg~~~~~l-~-----~h~~~~V~~v~~sp-dg~~la~~~~d~~i-----------  476 (894)
                      -++++++.||.+    ..+.+||+.+++....- .     ......-.+++... +++.++.|+.++..           
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            466777777753    35889998887654433 1     11110112333333 77788888765421           


Q ss_pred             --------------cceEEEEEecCCCEEEEEECCC--CEEEEEcCCCcEEEEEe---C---CCCeeEEEEcCC-CCEEE
Q psy10063        477 --------------EPINDMQFSKDATMFITASKDH--TAKLFTTHDRQLLKTYT---T---ERPVNSAALSPI-LPHVV  533 (894)
Q Consensus       477 --------------~~V~~l~~spdg~~L~sgs~Dg--~V~iwdl~~~~~~~~~~---~---~~~v~~l~~spd-g~~l~  533 (894)
                                    +.-.+++...++++++.|+.++  .+.+||+.+.+....-.   .   .....++.+..+ ++.++
T Consensus       476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv  555 (695)
T 2zwa_A          476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII  555 (695)
T ss_dssp             TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred             CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence                          1111222224778888887654  68999998876544321   1   122334566655 55555


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccc------eE--EEcc-CCCCCeEEEEEecCCCEEEEEeCC--------Cc
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEE------EF--ARIK-GHFGPINSLAFHPDGKSYASGGED--------GF  596 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~------~~--~~l~-~h~~~V~~l~~spdg~~l~sgs~D--------g~  596 (894)
                      +||.....       ....-++.+||+...+      ..  .... ..... .+++...++++++.|+.+        ..
T Consensus       556 ~GG~~~~~-------~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~  627 (695)
T 2zwa_A          556 LGGGFMDQ-------TTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYG-SQIKYITPRKLLIVGGTSPSGLFDRTNS  627 (695)
T ss_dssp             ECCBCTTS-------SCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBS-CEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred             ECCcCCCC-------CeeeCcEEEEEccCCccccceEEEEcCCCCCCCccc-ceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence            55542210       0011236677776655      11  1111 11111 123333347777777743        45


Q ss_pred             EEEEECCCCc
Q psy10063        597 LISNTLSNGL  606 (894)
Q Consensus       597 I~vwdl~~~~  606 (894)
                      |.+||+....
T Consensus       628 v~~yd~~t~~  637 (695)
T 2zwa_A          628 IISLDPLSET  637 (695)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEECCCCe
Confidence            8888887654

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=92.39  E-value=12  Score=39.12  Aligned_cols=111  Identities=11%  Similarity=0.031  Sum_probs=64.1

Q ss_pred             CCCEEEEEECCCCEEEEEcCCC-------cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        487 DATMFITASKDHTAKLFTTHDR-------QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~-------~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      ++.+|+..+..|.++...+...       .....+..++.+..+........|+..+..|....+....      |+...
T Consensus       108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~------v~~~g  181 (307)
T 1zi0_A          108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESS------VRAMG  181 (307)
T ss_dssp             TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGG------SCBCC
T ss_pred             CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHH------cCccC
Confidence            4667889999999999977522       1112223346666666666666788888887643322210      11110


Q ss_pred             c-cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        560 L-IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       560 ~-~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      . ..|.....|. ....|.++....++..|+..+..|.++..+++.
T Consensus       182 r~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e  226 (307)
T 1zi0_A          182 CNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE  226 (307)
T ss_dssp             TTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred             CCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence            0 0111111222 234566665555566788889999999887744

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=92.09  E-value=7  Score=49.19  Aligned_cols=92  Identities=12%  Similarity=0.061  Sum_probs=56.9

Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc-
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF-  562 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~-  562 (894)
                      .+|..+.||.-. ...|+|||++..+.++.+....+|.--.|-.+. .|+..+...               |..|++.. 
T Consensus        73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~lVT~~a---------------VyHW~~~~~  135 (1630)
T 1xi4_A           73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVTDNA---------------VYHWSMEGE  135 (1630)
T ss_pred             cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEEEcCCe---------------EEEeccCCC
Confidence            345555555443 678999999999999888888888888886543 444444443               66777653 


Q ss_pred             cceEEEccCC----CCCeEEEEEecCCCEEEEEe
Q psy10063        563 EEEFARIKGH----FGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       563 ~~~~~~l~~h----~~~V~~l~~spdg~~l~sgs  592 (894)
                      ..+++.+..|    ...|..-..+++.+|++..|
T Consensus       136 s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g  169 (1630)
T 1xi4_A          136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG  169 (1630)
T ss_pred             CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence            2233333333    23455555666777665443

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=91.94  E-value=5.3  Score=42.29  Aligned_cols=114  Identities=7%  Similarity=0.030  Sum_probs=64.5

Q ss_pred             CCCEEEEEEcc---CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        409 SAKITSLLWGN---LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       409 ~~~V~~l~~sp---dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      ...|.++..-+   +..+|+.++.+|.|+...+..-+...     .. .+..+.+..+.             .+..+...
T Consensus        94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~-----r~-G~~~i~lke~D-------------~lv~~~~~  154 (327)
T 3uc1_A           94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNR-----SG-GIVAVNLRDND-------------ELVGAVLC  154 (327)
T ss_dssp             TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCC-----SS-CEESCBCCTTC-------------CEEEEEEE
T ss_pred             CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccc-----cC-ceEEEEECCCC-------------EEEEEEEe
Confidence            34555554433   57799999999999988875422111     01 23333332222             23333333


Q ss_pred             cCCCEEEEEECCCCEEEEEcC--C---------CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        486 KDATMFITASKDHTAKLFTTH--D---------RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~--~---------~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      .....|+..+..|.+..+.+.  .         |..+..+..++.|.++....++.+|++.+..|.+
T Consensus       155 ~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~  221 (327)
T 3uc1_A          155 SAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYA  221 (327)
T ss_dssp             CTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEE
T ss_pred             cCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcE
Confidence            344556666777777666655  2         1111223335667777777777788888888864

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=90.94  E-value=16  Score=37.56  Aligned_cols=185  Identities=9%  Similarity=0.013  Sum_probs=91.4

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEE---EecCCCeEEEEecCCCCCCeeEEEEcC-CCCEEEEEeCCCCc---------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICT---WDLRMGRELESISGHAKEPINDMQFSK-DATMFITASHSQAV---------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~i---Wd~~tg~~~~~l~~h~~~~V~~v~~sp-dg~~la~~~~d~~i---------  476 (894)
                      +.|.++......++|+.-...|.++-   |++..++... + -..+..|..+.... +..+++.++..|.+         
T Consensus        24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~  101 (276)
T 3no0_A           24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE  101 (276)
T ss_dssp             CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred             CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence            44555554444445555555665543   3443332211 2 22222566554421 45677777776655         


Q ss_pred             --------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC---------CcEEEEEeCCCCeeEEEEcCCCCEEE
Q psy10063        477 --------------EPINDMQFSKDATMFITASKDHTAKLFTTHD---------RQLLKTYTTERPVNSAALSPILPHVV  533 (894)
Q Consensus       477 --------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~~~~~~v~~l~~spdg~~l~  533 (894)
                                    ..+..+........|+..+..|.+..+.+..         |.....+..++.|.++....++.+|+
T Consensus       102 ~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll  181 (276)
T 3no0_A          102 YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLL  181 (276)
T ss_dssp             TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEE
T ss_pred             hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEE
Confidence                          1333333344445677778888887776532         21222233346677766666677888


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEE--EECCC
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLIS--NTLSN  604 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~v--wdl~~  604 (894)
                      +.+..|......++.      ++.. -+.++-+..+ ...+.+..+....+...|+..+.+|.+..  ++++.
T Consensus       182 ~~T~~G~~kr~~~~e------~~~~-~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~  246 (276)
T 3no0_A          182 VITAKGRVKKISHEE------IPKT-NRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD  246 (276)
T ss_dssp             EEETTSCEEEEEGGG------SCCC-CTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred             EEeCCCcEEEeEHHH------cccC-CCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence            888888643322110      0000 0111122222 22334444433333445666677777766  66543

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=90.68  E-value=13  Score=39.29  Aligned_cols=107  Identities=13%  Similarity=0.057  Sum_probs=67.9

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCc-------EEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE-
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQ-------LLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY-  558 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~-------~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw-  558 (894)
                      +..+|+..+.+|.|+...+...+       ....++.++.+..+........|++.+..|.+..           +.++ 
T Consensus       108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~r-----------f~~~~  176 (327)
T 3uc1_A          108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIR-----------FSATD  176 (327)
T ss_dssp             SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEE-----------EECCT
T ss_pred             CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEE-----------EECcc
Confidence            57789999999999998875422       2222334566777766666778888888886433           2223 


Q ss_pred             -ecc------ccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        559 -HLI------FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       559 -d~~------~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                       ++.      .|..+..|. ....|.++....++.+|+..+..|.++.-.+...
T Consensus       177 ~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~  229 (327)
T 3uc1_A          177 EALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEY  229 (327)
T ss_dssp             TTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred             cccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence             222      111111222 2345677666666778899999999988877544

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=89.32  E-value=3.7  Score=50.48  Aligned_cols=39  Identities=21%  Similarity=0.228  Sum_probs=35.1

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT  515 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~  515 (894)
                      ..|.+++..++..+|++-+.|+.+|||++.+++++....
T Consensus       236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            467888888889999999999999999999999998875

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=88.78  E-value=8  Score=40.84  Aligned_cols=110  Identities=12%  Similarity=0.022  Sum_probs=58.2

Q ss_pred             CCEEEEEECCCCEEEEEcCCC------cEEE--EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        488 ATMFITASKDHTAKLFTTHDR------QLLK--TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~------~~~~--~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +.+|+.++..|.++...+...      +-+.  .+..++.+..+........|+..+..|....+..+.      |+...
T Consensus       106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~e------v~~~g  179 (323)
T 1wp5_A          106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESE------VSIVG  179 (323)
T ss_dssp             SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGG------SCBCC
T ss_pred             CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHH------CcccC
Confidence            567899999999999987422      1222  233346666666666667788888888643322210      11110


Q ss_pred             c-cccceEEEccCCCCCeEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10063        560 L-IFEEEFARIKGHFGPINSLAFHPDGK-SYASGGEDGFLISNTLSN  604 (894)
Q Consensus       560 ~-~~~~~~~~l~~h~~~V~~l~~spdg~-~l~sgs~Dg~I~vwdl~~  604 (894)
                      . ..|.....|. ....|.++....++. .|+..+..|..+..+++.
T Consensus       180 R~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e  225 (323)
T 1wp5_A          180 VRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE  225 (323)
T ss_dssp             SSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             CCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence            0 0111111121 223455554433344 566667777766665543

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=88.73  E-value=5.4  Score=42.49  Aligned_cols=52  Identities=12%  Similarity=-0.107  Sum_probs=25.6

Q ss_pred             eEEEEeccccce--EEEccCCCCCeEEEEEecCCCEEEEEeCCC------cEEEEECCCCcc
Q psy10063        554 DARFYHLIFEEE--FARIKGHFGPINSLAFHPDGKSYASGGEDG------FLISNTLSNGLD  607 (894)
Q Consensus       554 ~v~vwd~~~~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg------~I~vwdl~~~~~  607 (894)
                      ++.+||+...+.  +..+........++  .-++++++.|+.++      .|.+++++.++.
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~  345 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKV  345 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred             eEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence            466777765543  33333222222222  34778888888653      255557766653

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=86.11  E-value=30  Score=42.40  Aligned_cols=81  Identities=11%  Similarity=-0.092  Sum_probs=52.0

Q ss_pred             CCCEEEEEECCCCeEEEeccCccceeeEEEEecccc-ceEEE------ccCC---CCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063        528 ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE-EEFAR------IKGH---FGPINSLAFHPDGKSYASGGEDGFL  597 (894)
Q Consensus       528 dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~-~~~~~------l~~h---~~~V~~l~~spdg~~l~sgs~Dg~I  597 (894)
                      +...|+++-.||.+.....+...+.|....++-.+. ..++.      .+.+   ...+.+++..++..+|++.+.|+.+
T Consensus       180 ~~~~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lftl~~D~~L  259 (950)
T 4gq2_M          180 STSEICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVMLSLDYKL  259 (950)
T ss_dssp             SSSEEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEEEETTCEE
T ss_pred             cCCeEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEEEECCCEE
Confidence            445777788888776655555555554444443221 11111      1111   2256778888888999999999999


Q ss_pred             EEEECCCCccc
Q psy10063        598 ISNTLSNGLDI  608 (894)
Q Consensus       598 ~vwdl~~~~~~  608 (894)
                      |||++.+++.+
T Consensus       260 RiWsl~t~~~v  270 (950)
T 4gq2_M          260 KVLDLSTNQCV  270 (950)
T ss_dssp             EEEETTTTEEE
T ss_pred             EEEECCCCCeE
Confidence            99999988754

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=85.47  E-value=43  Score=35.94  Aligned_cols=60  Identities=7%  Similarity=-0.047  Sum_probs=31.7

Q ss_pred             eEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEEEEEeC--------------CCCeeEEEEcCC-CCEEEEEECCC
Q psy10063        479 INDMQFSK-DATMFITASKDHTAKLFTTHDRQLLKTYTT--------------ERPVNSAALSPI-LPHVVLGGGQE  539 (894)
Q Consensus       479 V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--------------~~~v~~l~~spd-g~~l~~~~~~~  539 (894)
                      |.+|.+.| +...|+.+..++.|... ...|+-...+..              ...+.+|++.++ ...|+++...+
T Consensus       179 i~~i~~d~~~~~~l~vg~~~ggl~~s-~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g  254 (394)
T 3b7f_A          179 MHSILVDPRDPKHLYIGMSSGGVFES-TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG  254 (394)
T ss_dssp             EEEEEECTTCTTCEEEEEETBEEEEE-SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred             eeEEEECCCCCCEEEEEECCCCEEEE-CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence            56888887 33445555444433332 222333333321              124789999986 35677665443

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=83.63  E-value=51  Score=35.30  Aligned_cols=109  Identities=10%  Similarity=-0.046  Sum_probs=66.7

Q ss_pred             ecCCCEEEEEECCCCEEEEEcCC---------CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        485 SKDATMFITASKDHTAKLFTTHD---------RQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      -++..++++.+.+|.|+--.+..         |.....++.++.+..+........|++.+..|.+..           +
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~-----------~   72 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFW-----------L   72 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEE-----------E
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEE-----------E
Confidence            46677888889999988765432         223333445567777777777777887777775422           4


Q ss_pred             EEEecccc------ceEE---EccCCCCCeEEEEEec---CCCEEEEEeCCCcEEEEECCCC
Q psy10063        556 RFYHLIFE------EEFA---RIKGHFGPINSLAFHP---DGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       556 ~vwd~~~~------~~~~---~l~~h~~~V~~l~~sp---dg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ++|++...      ..+.   .|. ....|.++....   ++.+|+.++..|.++...+...
T Consensus        73 ~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~  133 (370)
T 3l6v_A           73 PVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEF  133 (370)
T ss_dssp             EGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGG
T ss_pred             EHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHh
Confidence            55555432      2111   122 234555554332   4568999999999998887543

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=83.13  E-value=44  Score=34.16  Aligned_cols=158  Identities=10%  Similarity=0.074  Sum_probs=87.5

Q ss_pred             cceeeeeccCccEEEecCCC-----eEEEEEecCCCCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCe----EEEEec
Q psy10063        380 VDRLNSMSPAARKLATNAEP-----VVKMQVTDQSAKITSLLWGN--LDQYIITGHAKGDICTWDLRMGR----ELESIS  448 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~~-----~~~~~l~~H~~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~----~~~~l~  448 (894)
                      .+.++.|+..|+........     ...+ +. ....|.++.. .  +..+++..+.+|.|+...+..-.    -+..+.
T Consensus        35 ~~~ll~fT~~G~v~~~~~~~lp~~~~~~l-l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~  111 (276)
T 3no0_A           35 TEGLFLVSNRGRVYWIAGSQALQGSKVSL-KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIK  111 (276)
T ss_dssp             TSCEEEEETTSEEEEECSHHHHTSEECCC-SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSC
T ss_pred             CCEEEEEcCCCeEEEEEhhhCccCccccc-CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEe
Confidence            34566677777765432110     0002 33 3566766654 4  56799999999999998875421    112222


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------------------cceEEEEEecCCCEEEEEECCCCEEE
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAV--------------------------EPINDMQFSKDATMFITASKDHTAKL  502 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i--------------------------~~V~~l~~spdg~~L~sgs~Dg~V~i  502 (894)
                      ...++.+..+........|+..+..|.+                          ..|.++....++..|+..+..|.++.
T Consensus       112 lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr  191 (276)
T 3no0_A          112 LTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKK  191 (276)
T ss_dssp             CCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEE
T ss_pred             cCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEE
Confidence            2222366666666666667766666654                          24445544455667888888888888


Q ss_pred             EEcCC-------CcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC
Q psy10063        503 FTTHD-------RQLLKTYTTERPVNSAALSPILPHVVLGGGQEA  540 (894)
Q Consensus       503 wdl~~-------~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~  540 (894)
                      ..+..       ++-+..+...+.+..+....+...|++.+..|.
T Consensus       192 ~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~  236 (276)
T 3no0_A          192 ISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGK  236 (276)
T ss_dssp             EEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSC
T ss_pred             eEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCe
Confidence            87643       222222222344444433333345555555554

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=83.05  E-value=54  Score=35.19  Aligned_cols=166  Identities=9%  Similarity=0.057  Sum_probs=92.0

Q ss_pred             CCCEEEEEEccCCCEEEE--ecC-------------CCcEEEEecCCC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEe
Q psy10063        409 SAKITSLLWGNLDQYIIT--GHA-------------KGDICTWDLRMG--RELESISGHAKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~s--gs~-------------Dg~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~  471 (894)
                      --.|..+...+++++-+.  |-.             --.|.+||+.++  ++++++..... -+.     + +       
T Consensus        86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~-~~~-----~-~-------  151 (381)
T 3q6k_A           86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTR-LVE-----K-P-------  151 (381)
T ss_dssp             SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGG-GCC-----C-G-------
T ss_pred             eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHH-hcc-----c-C-------
Confidence            345777777776664332  211             125889999999  98888765322 000     0 0       


Q ss_pred             CCCCccceEEEEEe---cC----CCEEEEE-ECCCCEEEEEcCCCcEEEEEe-------------------CCCCeeEEE
Q psy10063        472 HSQAVEPINDMQFS---KD----ATMFITA-SKDHTAKLFTTHDRQLLKTYT-------------------TERPVNSAA  524 (894)
Q Consensus       472 ~d~~i~~V~~l~~s---pd----g~~L~sg-s~Dg~V~iwdl~~~~~~~~~~-------------------~~~~v~~l~  524 (894)
                           ..+..|++.   ++    +.++... +...-|.|+|+++++..+.+.                   ....+..|+
T Consensus       152 -----S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIa  226 (381)
T 3q6k_A          152 -----TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGIT  226 (381)
T ss_dssp             -----GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEE
T ss_pred             -----CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEE
Confidence                 023444444   11    2232222 235678888888887666542                   023688899


Q ss_pred             EcCC----CCEEEEEECCCCeEEEeccCccceeeEEEEeccc---cceEEEccCCC---CCeEEEEEe-cCCCEEEEEeC
Q psy10063        525 LSPI----LPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF---EEEFARIKGHF---GPINSLAFH-PDGKSYASGGE  593 (894)
Q Consensus       525 ~spd----g~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~---~~~~~~l~~h~---~~V~~l~~s-pdg~~l~sgs~  593 (894)
                      ++|+    ++.|+.....+.. ++.+.         .-.++.   ...++.+ |..   ..-..++++ .+|.++++--.
T Consensus       227 Lsp~~~~~~~~LYf~plss~~-ly~V~---------T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~  295 (381)
T 3q6k_A          227 LGDRDSEGNRPAYYLAGSAIK-VYSVN---------TKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEAN  295 (381)
T ss_dssp             ECCCCTTSCCEEEEEESSCSE-EEEEE---------HHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESS
T ss_pred             ecCCcCCCCeEEEEEECCCCc-EEEEE---------HHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEecc
Confidence            9998    7888887766631 22111         000111   1112222 222   233456675 56766777777


Q ss_pred             CCcEEEEECCC
Q psy10063        594 DGFLISNTLSN  604 (894)
Q Consensus       594 Dg~I~vwdl~~  604 (894)
                      ...|..|+...
T Consensus       296 ~~aI~~w~~~~  306 (381)
T 3q6k_A          296 TKQVSCWNTQK  306 (381)
T ss_dssp             SSEEEEEETTS
T ss_pred             CCeEEEEeCCC
Confidence            88899999875

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=82.90  E-value=48  Score=34.51  Aligned_cols=64  Identities=13%  Similarity=0.025  Sum_probs=39.6

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCC-------cEEEE--EeCCCCeeEEEEcCCCCEEEEEECCCCe
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDR-------QLLKT--YTTERPVNSAALSPILPHVVLGGGQEAR  541 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~-------~~~~~--~~~~~~v~~l~~spdg~~l~~~~~~~~~  541 (894)
                      .+..+....+...|+..+.+|.+..+.+..-       +-++.  +..++.|.++....++..|++.+..|..
T Consensus       152 ~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~  224 (312)
T 1suu_A          152 FVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYG  224 (312)
T ss_dssp             CEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEE
T ss_pred             EEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCce
Confidence            4444444445567788888998888876431       11222  2334567777666666778888877763

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=81.94  E-value=2.3  Score=45.27  Aligned_cols=110  Identities=7%  Similarity=0.008  Sum_probs=67.9

Q ss_pred             CEEEEecCCCcEEEEEccCCceeeccccCC--CceEee----cCCCeEEEE--ecCCCCceeEEEeecCCcceeeeccC-
Q psy10063        773 EKLALALADKVSERYRDRKNKATAGFLLSC--PDFLFD----FDTTREVTT--TSTKVGKFDARFYHLIFEEEFARIKG-  843 (894)
Q Consensus       773 ~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~--~~~~fS----~dg~~l~~a--s~d~~g~~~I~vwd~~tg~~l~~l~g-  843 (894)
                      .++++++.||.|+-+|..+++.+..+....  ..+..+    +.+..++++  ..++    .|+.++.+.|.....+.. 
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG----~l~a~~~~~G~~~~~~~~~   86 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDG----NIYYFNAHQGLQKLPLSIR   86 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTT----EEEEEETTTEEEEEEEEHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCC----EEEEEECCCCcEEeeeccc
Confidence            577888899999999988888877766542  222211    112234433  3444    588888887754432221 


Q ss_pred             ---CCCCeeE---EEE-----eeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063        844 ---HFGPINS---LAF-----HPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       844 ---H~~~V~~---l~f-----Spdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                         +..++..   ..+     +.++..+++|+.+|.+...|+..|+.+.++...
T Consensus        87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~  140 (339)
T 2be1_A           87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG  140 (339)
T ss_dssp             HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred             cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence               1222211   000     014567889999999999999999998888754

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=81.87  E-value=52  Score=34.16  Aligned_cols=129  Identities=12%  Similarity=0.098  Sum_probs=66.6

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEec---C------CCeEEE-EecCCCCCCeeEEEEc---CCCCEEEEEeCCCCc--
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDL---R------MGRELE-SISGHAKEPINDMQFS---KDATMFITASHSQAV--  476 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~---~------tg~~~~-~l~~h~~~~V~~v~~s---pdg~~la~~~~d~~i--  476 (894)
                      +..+......+.|+..+..|.++-+..   .      .|..+. .+....+..|.++...   .++.+|+.++..|.+  
T Consensus        44 l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Kr  123 (307)
T 1zi0_A           44 IDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKK  123 (307)
T ss_dssp             EEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEE
T ss_pred             EEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEE
Confidence            333333444445555556676554443   2      233221 1111222256655442   356678888877765  


Q ss_pred             ----------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCC---------CcEEEEEeCCCCeeEEEE
Q psy10063        477 ----------------------EPINDMQFSKDATMFITASKDHTAKLFTTHD---------RQLLKTYTTERPVNSAAL  525 (894)
Q Consensus       477 ----------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~---------~~~~~~~~~~~~v~~l~~  525 (894)
                                            ..+..+....+...|+..+.+|.+..+.+..         |.....+..++.|.++..
T Consensus       124 t~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~  203 (307)
T 1zi0_A          124 TVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIV  203 (307)
T ss_dssp             EEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEC
T ss_pred             EEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEE
Confidence                                  1333333334445566677778777776532         111112233456777665


Q ss_pred             cCCCCEEEEEECCCC
Q psy10063        526 SPILPHVVLGGGQEA  540 (894)
Q Consensus       526 spdg~~l~~~~~~~~  540 (894)
                      ..++..|++.+..|.
T Consensus       204 ~~~~~~ll~~T~~G~  218 (307)
T 1zi0_A          204 PRGDGAILTATQNGY  218 (307)
T ss_dssp             CCSSCEEEEEETTSE
T ss_pred             ecCCCEEEEEEcCCc
Confidence            555667777777775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	894
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-14
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	8e-13
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-05
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-10
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	7e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	9e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-04
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.003
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	9e-08
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-04
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.003
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	8e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.001
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.001
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	4e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	5e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.002
d1ofla_	481	b.80.1.4 (A:) Chondroitinase B {Pedobacter heparin	5e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	7e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.002
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	0.002
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	0.002
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.003
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.003

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 72.5 bits (176), Expect = 4e-14
 Identities = 30/184 (16%), Positives = 54/184 (29%), Gaps = 42/184 (22%)

Query: 417 WGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV 476
                +  ++G        WD+R G   ++ +GH                          
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES------------------------ 227

Query: 477 EPINDMQFSKDATMFITASKDHTAKL---FTTHDRQLLKTYTTERPVNSAALSPILPHVV 533
             IN + F  +   F T S D T +L       +            + S + S     ++
Sbjct: 228 -DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL 286

Query: 534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE 593
            G                 F+   +  +  +    + GH   ++ L    DG + A+G  
Sbjct: 287 AGYDD--------------FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332

Query: 594 DGFL 597
           D FL
Sbjct: 333 DSFL 336

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.3 bits (160), Expect = 4e-12
 Identities = 39/313 (12%), Positives = 83/313 (26%), Gaps = 35/313 (11%)

Query: 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS 628
           ++GH   I ++ +  D +   S  +DG LI         +                  P 
Sbjct: 51  LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH---------------AIPL 95

Query: 629 QGGHIHSLS-SHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVN 687
           +   + + + + S +    GG+ +   + +                          L  N
Sbjct: 96  RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 155

Query: 688 PFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDAS-----PLMTWGHIE 742
                          IE  +   +       +          +  S         W   E
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215

Query: 743 GTP-FKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD---KVSERYRDRKNKATAGF 798
           G       G ++ I A            P     A    D   ++ +   D++    +  
Sbjct: 216 GMCRQTFTGHESDINAICFF--------PNGNAFATGSDDATCRLFDLRADQELMTYSHD 267

Query: 799 LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK 858
            + C      F  +  +              +  +  +    + GH   ++ L    DG 
Sbjct: 268 NIICGITSVSFSKSGRLLLAGYDDFN--CNVWDALKADRAGVLAGHDNRVSCLGVTDDGM 325

Query: 859 SYASGGEDGFVRL 871
           + A+G  D F+++
Sbjct: 326 AVATGSWDSFLKI 338

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 11/74 (14%), Positives = 26/74 (35%), Gaps = 1/74 (1%)

Query: 403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK 462
               +    ITS+ +    + ++ G+   +   WD         ++GH    ++ +  + 
Sbjct: 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH-DNRVSCLGVTD 322

Query: 463 DATMFITASHSQAV 476
           D     T S    +
Sbjct: 323 DGMAVATGSWDSFL 336

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.5 bits (119), Expect = 5e-07
 Identities = 33/249 (13%), Positives = 76/249 (30%), Gaps = 15/249 (6%)

Query: 363 QLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVKMQVTDQ------SAKITSLL 416
           +L      +  L + +   R         ++  N +PV ++Q+  +       AKI ++ 
Sbjct: 3   ELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMH 62

Query: 417 WGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMF------ITA 470
           WG   + +++    G +  WD     ++ +I       +    ++               
Sbjct: 63  WGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR-SSWVMTCAYAPSGNYVACGGLDNIC 121

Query: 471 SHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILP 530
           S         +++ S++                         T      + +   +    
Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT 181

Query: 531 HVVLGGGQEAREVTTTSTKVGKFD--ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY 588
                    +    T     G  D  A+ + +          GH   IN++ F P+G ++
Sbjct: 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241

Query: 589 ASGGEDGFL 597
           A+G +D   
Sbjct: 242 ATGSDDATC 250

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.5 bits (106), Expect = 2e-05
 Identities = 7/44 (15%), Positives = 17/44 (38%)

Query: 841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD 884
           ++GH   I ++ +  D +   S  +DG + +         +   
Sbjct: 51  LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP 94

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 13/64 (20%), Positives = 24/64 (37%)

Query: 828 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISE 887
           + + +          GH   IN++ F P+G ++A+G +D   RL          T+    
Sbjct: 209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268

Query: 888 EFHC 891
               
Sbjct: 269 IICG 272

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.2 bits (165), Expect = 8e-13
 Identities = 19/182 (10%), Positives = 49/182 (26%), Gaps = 20/182 (10%)

Query: 417 WGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV 476
                  I +      +  W +        +  H +  +  + ++ +++    +  +   
Sbjct: 151 PNQDGTLIASCSNDQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSISEATG-- 207

Query: 477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLG 535
                 +  K     ++ S+D T K++       L T    +  V           ++  
Sbjct: 208 --SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265

Query: 536 GGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG 595
              +                R +    +     +  H   + SL FH       +G  D 
Sbjct: 266 ADDKT--------------LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ 311

Query: 596 FL 597
            +
Sbjct: 312 TV 313

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.5 bits (119), Expect = 4e-07
 Identities = 29/197 (14%), Positives = 58/197 (29%), Gaps = 2/197 (1%)

Query: 281 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 340
           + +   T       T     T T               T   + +N  T       T   
Sbjct: 118 SASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 177

Query: 341 TSTSTSTSTSTNNQHQHQHQQQQLIHFLSSSPILSSPLSVDRLNSMSPAAR-KLATNAEP 399
            +                      I   + S    S      L S S     K+   +  
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 237

Query: 400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQ 459
           +  M +      +  +L+ +  ++I++      +  WD +  R +++++ H +  +  + 
Sbjct: 238 MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-EHFVTSLD 296

Query: 460 FSKDATMFITASHSQAV 476
           F K A   +T S  Q V
Sbjct: 297 FHKTAPYVVTGSVDQTV 313

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (114), Expect = 2e-06
 Identities = 37/308 (12%), Positives = 78/308 (25%), Gaps = 52/308 (16%)

Query: 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS 628
           + GH  P+  + FHP      S  ED  +                          +    
Sbjct: 13  LSGHRSPVTRVIFHPVFSVMVSASEDATIK-------------------------VWDYE 47

Query: 629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNP 688
            G    +L  H+ S  D                      I    +   +      + +  
Sbjct: 48  TGDFERTLKGHTDSVQD----------------------ISFDHSGKLLASCSADMTIKL 85

Query: 689 FDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMT-----WGHIEG 743
           +D Q    +      +   + +SI  +G  +     D+   +             GH E 
Sbjct: 86  WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 145

Query: 744 TPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP 803
                   D  ++A   +           ++    L +             ++   +S  
Sbjct: 146 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 205

Query: 804 DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG 863
                  + +      +       + + +        + GH   +  + FH  GK   S 
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265

Query: 864 GEDGFVRL 871
            +D  +R+
Sbjct: 266 ADDKTLRV 273

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (110), Expect = 5e-06
 Identities = 9/44 (20%), Positives = 16/44 (36%)

Query: 828 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRL 871
           R +    +     +  H   + SL FH       +G  D  V++
Sbjct: 272 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (108), Expect = 9e-06
 Identities = 31/271 (11%), Positives = 78/271 (28%), Gaps = 47/271 (17%)

Query: 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKE--------------- 453
            + +T +++  +   +++      I  WD   G    ++ GH                  
Sbjct: 17  RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76

Query: 454 --PINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL 511
                 ++           +       ++ +    +    ++AS+D T K++       +
Sbjct: 77  CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136

Query: 512 KTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG 571
           KT+T  R             ++     +                R + +  +E  A ++ 
Sbjct: 137 KTFTGHREWVRMVRPNQDGTLIASCSNDQT-------------VRVWVVATKECKAELRE 183

Query: 572 HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY---PS 628
           H   +  +++ P+    +     G     +   G  +  GS         D  +     S
Sbjct: 184 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR--------DKTIKMWDVS 235

Query: 629 QGGHIHSLSSHSTS------STDTGGVFSGS 653
            G  + +L  H          +    + S +
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 266

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (106), Expect = 2e-05
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 841 IKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD 884
           + GH  P+  + FHP      S  ED  +++  ++   F+ T  
Sbjct: 13  LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 56

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.0 bits (146), Expect = 3e-10
 Identities = 41/332 (12%), Positives = 86/332 (25%), Gaps = 22/332 (6%)

Query: 562 FEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGL--DISEGSFTSSSTQ 619
            + E  +   H   +  + F  DG+  A+G      +       L   +S+ S  +   +
Sbjct: 51  IDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPE 110

Query: 620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINH 679
             +    PS   +I S+           G                   ++     +    
Sbjct: 111 NLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLD 170

Query: 680 SGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASP---LM 736
                               D +       +SI    T + V+P D +     S    + 
Sbjct: 171 YFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 230

Query: 737 TWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA 796
            W    G   +   S+     G  D  + +      + +     D+  + +  +     +
Sbjct: 231 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 290

Query: 797 GFLLSCPDFLFDFDTTREVTTTSTKVGKFD-----------ARFYHLIFEEEFARIKGHF 845
                            +    S    + D             F+          ++GH 
Sbjct: 291 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR 350

Query: 846 GPINSLA------FHPDGKSYASGGEDGFVRL 871
             + S+A        P+   +A+G  D   R+
Sbjct: 351 NSVISVAVANGSSLGPEYNVFATGSGDCKARI 382

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.4 bits (129), Expect = 3e-08
 Identities = 59/342 (17%), Positives = 111/342 (32%), Gaps = 66/342 (19%)

Query: 360 QQQQLIHFLSSSPILSSPLSVDRLNSMSPAARKLATNAEPVVK------------MQVTD 407
             Q+  H   S PI   P  +D  +   P A K  TN   ++              +  D
Sbjct: 6   YNQRANH---SKPI--PPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD 60

Query: 408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA---------------- 451
            ++ +  + + N  +Y+ TG        + +  G  +  +S  +                
Sbjct: 61  HTSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119

Query: 452 -KEPINDMQFSKDATMFITASHS------------------QAVEPINDMQFSKDATMFI 492
               I  + FS D     T +                       + I  + +       +
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179

Query: 493 TASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK 552
           + S D T +++     Q   T + E  V + A+SP     +  G  +       + +V  
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD------RAVRVWD 233

Query: 553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGS 612
            +  F     + E     GH   + S+ F  DG+S  SG  D  +    L N  + S+  
Sbjct: 234 SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 293

Query: 613 FTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSR 654
             +S T +   + Y      + S+++          + SGS+
Sbjct: 294 TPNSGTCE---VTYIGHKDFVLSVATTQNDEY----ILSGSK 328

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.1 bits (123), Expect = 2e-07
 Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 39/192 (20%)

Query: 417 WGNLDQYIITGHAKGDICTWDLRMGR-------ELESISGHAKEPINDMQFSKDATMFIT 469
                +YI  G     +  WD   G        E ES +GH K+ +  + F++D    ++
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH-KDSVYSVVFTRDGQSVVS 271

Query: 470 ASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL 529
            S  ++V+ + ++Q + + +   T                 +     +  V S A +   
Sbjct: 272 GSLDRSVK-LWNLQNANNKSDSKT----------PNSGTCEVTYIGHKDFVLSVATTQND 320

Query: 530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLA------FHP 583
            +++ G                     F+          ++GH   + S+A        P
Sbjct: 321 EYILSGSKDRG--------------VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366

Query: 584 DGKSYASGGEDG 595
           +   +A+G  D 
Sbjct: 367 EYNVFATGSGDC 378

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.3 bits (121), Expect = 3e-07
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 19/102 (18%)

Query: 402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFS 461
           ++        + S+     D+YI++G     +  WD + G  L  + GH +  +  +  +
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH-RNSVISVAVA 359

Query: 462 KDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLF 503
                             N      +  +F T S D  A+++
Sbjct: 360 ------------------NGSSLGPEYNVFATGSGDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.6 bits (101), Expect = 7e-05
 Identities = 16/57 (28%), Positives = 23/57 (40%)

Query: 821 KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA 877
           +V   +  F     + E     GH   + S+ F  DG+S  SG  D  V+L     A
Sbjct: 230 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.7 bits (124), Expect = 7e-08
 Identities = 31/309 (10%), Positives = 70/309 (22%), Gaps = 28/309 (9%)

Query: 563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPD 622
           +E    I GH   I +L  +P      SG  DG ++  + S+          S       
Sbjct: 3   DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS-KA 57

Query: 623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGT 682
                        ++  +     +    + +  D     LT D+ + + ++         
Sbjct: 58  QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV 117

Query: 683 RLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIE 742
           RL+        S         E    ++                +       +       
Sbjct: 118 RLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYI 177

Query: 743 GTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSC 802
                +       L        +      +         +      + +    A   L  
Sbjct: 178 AAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT 237

Query: 803 PDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYAS 862
             F++      ++                         +  H   +N+L +        S
Sbjct: 238 NIFIYSVKRPMKIIKA----------------------LNAHKDGVNNLLWETPST-LVS 274

Query: 863 GGEDGFVRL 871
            G D  ++ 
Sbjct: 275 SGADACIKR 283

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (125), Expect = 9e-08
 Identities = 25/313 (7%), Positives = 62/313 (19%), Gaps = 41/313 (13%)

Query: 571 GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQG 630
            H   + ++      +   +GG+    + +               S       +      
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGGKGCVKVWDI--------------SHPGNKSPVSQLDCL 94

Query: 631 GHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFD 690
              + + S          +  G               I           +          
Sbjct: 95  NRDNYIRSCKLLPDGCTLIVGGEA---------STLSIWDLAAPTPRIKAELTSSAPACY 145

Query: 691 EQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDG 750
                  +K      +   +++     +  V  F       +   ++    +     LD 
Sbjct: 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205

Query: 751 SDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFL---- 806
           +             +     +   L      +      +  N             L    
Sbjct: 206 TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE 265

Query: 807 -------FDFDTTREVTTTSTKVGK-FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK 858
                  F +     V+T    +   +   +   IF+            + S     D K
Sbjct: 266 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ------SKESSSVLSCDISVDDK 319

Query: 859 SYASGGEDGFVRL 871
              +G  D    +
Sbjct: 320 YIVTGSGDKKATV 332

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (115), Expect = 1e-06
 Identities = 20/123 (16%), Positives = 29/123 (23%), Gaps = 11/123 (8%)

Query: 475 AVEPINDMQFSKDATMFITA-SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVV 533
             +P      + D  M       D           + + T      V +  +S    HV 
Sbjct: 8   GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 67

Query: 534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGE 593
            GG    +           +D                     I S    PDG +   GGE
Sbjct: 68  TGGKGCVK----------VWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117

Query: 594 DGF 596
              
Sbjct: 118 AST 120

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 6e-05
 Identities = 11/58 (18%), Positives = 22/58 (37%)

Query: 480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG 537
             ++F+     F++  KD+    + T     +        V S  +S    ++V G G
Sbjct: 269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSG 326

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (99), Expect = 1e-04
 Identities = 10/90 (11%), Positives = 22/90 (24%), Gaps = 26/90 (28%)

Query: 414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS 473
           SL +    ++ ++      +  W    G  +      +                      
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS---------------------- 307

Query: 474 QAVEPINDMQFSKDATMFITASKDHTAKLF 503
                +     S D    +T S D  A ++
Sbjct: 308 ----SVLSCDISVDDKYIVTGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 0.003
 Identities = 12/87 (13%), Positives = 19/87 (21%)

Query: 807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 866
               T    T     V  +D                     I S    PDG +   GGE 
Sbjct: 59  ISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118

Query: 867 GFVRLHTFDQAYFDYTFDISEEFHCQP 893
             + +            +++       
Sbjct: 119 STLSIWDLAAPTPRIKAELTSSAPACY 145

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.9 bits (125), Expect = 9e-08
 Identities = 18/129 (13%), Positives = 33/129 (25%), Gaps = 53/129 (41%)

Query: 470 ASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPIL 529
           A HS  VEPI+   ++KD T       +H   ++     + ++ +               
Sbjct: 1   AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE-------------- 46

Query: 530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA 589
                                                  +K H G +  + + PD     
Sbjct: 47  ---------------------------------------LKEHNGQVTGVDWAPDSNRIV 67

Query: 590 SGGEDGFLI 598
           + G D    
Sbjct: 68  TCGTDRNAY 76

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.6 bits (106), Expect = 2e-05
 Identities = 10/58 (17%), Positives = 18/58 (31%)

Query: 836 EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP 893
            +   +K H G +  + + PD     + G D    + T     +  T  I        
Sbjct: 42  VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR 99

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.4 bits (95), Expect = 4e-04
 Identities = 6/67 (8%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFIT 469
           I+   W      I       ++  ++    +  ++  +  H    +  + ++ D+   +T
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVT 68

Query: 470 ASHSQAV 476
               +  
Sbjct: 69  CGTDRNA 75

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.8 bits (91), Expect = 0.001
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 20/77 (25%)

Query: 453 EPINDMQFSKDATMFITASHSQAV--------------------EPINDMQFSKDATMFI 492
           EPI+   ++KD T      ++  V                      +  + ++ D+   +
Sbjct: 8   EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67

Query: 493 TASKDHTAKLFTTHDRQ 509
           T   D  A ++T   R 
Sbjct: 68  TCGTDRNAYVWTLKGRT 84

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.7 bits (88), Expect = 0.003
 Identities = 6/25 (24%), Positives = 11/25 (44%)

Query: 847 PINSLAFHPDGKSYASGGEDGFVRL 871
           PI+  A++ D    A    +  V +
Sbjct: 9   PISCHAWNKDRTQIAICPNNHEVHI 33

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 5e-07
 Identities = 22/188 (11%), Positives = 50/188 (26%), Gaps = 12/188 (6%)

Query: 417 WGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV 476
                + +++G     +  WD      L ++ GH            D    ++ S   ++
Sbjct: 143 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH---TNRVYSLQFDGIHVVSGSLDTSI 199

Query: 477 -----EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPH 531
                E  N +          +  +     L + +    +K +  +       L     H
Sbjct: 200 RVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 259

Query: 532 VVLGGGQEAREVTTTST----KVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS 587
                  +  +    ++     V  +D +    I         G  G +  +        
Sbjct: 260 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLV 319

Query: 588 YASGGEDG 595
            A G  +G
Sbjct: 320 CAVGSRNG 327

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (110), Expect = 5e-06
 Identities = 44/344 (12%), Positives = 86/344 (25%), Gaps = 53/344 (15%)

Query: 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLI---------SNTLSNGLDISEGSFTSSSTQ 619
           +KGH   + +      G    SG +D  L            TL         S    +  
Sbjct: 12  LKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 70

Query: 620 QPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQI-----EMARNR 674
                    +  +  +     T    T  V      +   V  ++D  +     E  +  
Sbjct: 71  ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL 130

Query: 675 MSINHSGTRLHVNPFDEQQSVELTKDEQI-----EMARNRMSINHSGTRLHVNPFDEQQS 729
             +      +    +D ++ V    D  +     E      ++     R++   FD    
Sbjct: 131 HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHV 190

Query: 730 VDAS--------------PLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKL 775
           V  S               + T    +     ++  D  +++G  D   K+ +    + L
Sbjct: 191 VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCL 250

Query: 776 ALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE 835
                    +             + S  D                 V  +D +    I  
Sbjct: 251 QTLQGPNKHQSAVTCLQFNKNFVITSSDD---------------GTVKLWDLKTGEFIRN 295

Query: 836 EEFARIKGHFGPINSLAFHPDGKSYASGGEDG----FVRLHTFD 875
                  G  G +  +         A G  +G     + +  FD
Sbjct: 296 LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.6 bits (116), Expect = 8e-07
 Identities = 33/305 (10%), Positives = 75/305 (24%), Gaps = 20/305 (6%)

Query: 569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPS 628
             GH   I +L+   DGK+  S   +G + S       DIS G            ++   
Sbjct: 8   RYGHNKAITALSSSADGKTLFSADAEGHINS------WDISTGISNRVFPDVHATMITGI 61

Query: 629 QGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNP 688
           +      L + S           GS VD            +   N++S    G  +  + 
Sbjct: 62  KTTSKGDLFTVSWDDHLKVVPAGGSGVD----------SSKAVANKLSSQPLGLAVSADG 111

Query: 689 FDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKL 748
                +               + I+++ + + ++   +  +V         +        
Sbjct: 112 DIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVS 171

Query: 749 DGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFD 808
           +       A    + F                   S           +    +       
Sbjct: 172 EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVS 231

Query: 809 FDTTREVTTTSTKVGKFDARFYHL--IFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 866
           +        T +         +++    +        H     +     +  +  S G+D
Sbjct: 232 WSPDNVRLATGSLDNSV--IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289

Query: 867 GFVRL 871
             ++ 
Sbjct: 290 SNIKF 294

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.7 bits (93), Expect = 5e-04
 Identities = 7/84 (8%), Positives = 18/84 (21%), Gaps = 2/84 (2%)

Query: 478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLG 535
            I  +  S D     +A  +     +        + +       +     +       + 
Sbjct: 14  AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 73

Query: 536 GGQEAREVTTTSTKVGKFDARFYH 559
                + V    + V    A    
Sbjct: 74  WDDHLKVVPAGGSGVDSSKAVANK 97

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.6 bits (90), Expect = 0.001
 Identities = 11/64 (17%), Positives = 24/64 (37%)

Query: 409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI 468
           +  IT+L      + + +  A+G I +WD+  G             I  ++ +    +F 
Sbjct: 12  NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71

Query: 469 TASH 472
            +  
Sbjct: 72  VSWD 75

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (103), Expect = 3e-05
 Identities = 33/393 (8%), Positives = 88/393 (22%), Gaps = 59/393 (15%)

Query: 484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEARE 542
              +    IT + D   +++ + +++ L   +  +  V +   +         GG     
Sbjct: 19  LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--------GGILV-- 68

Query: 543 VTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL 602
              + +                              +  + + K   +G  D  L    L
Sbjct: 69  ---SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125

Query: 603 SNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVEL 662
                + +                      +      S  +    G    S   D+ + +
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIV 185

Query: 663 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN 722
               Q++     +S +       +   + ++ +  + D  I +            + H  
Sbjct: 186 WDVAQMKCLY-ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 244

Query: 723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADK 782
                +  D   +          +  +           ++            L     ++
Sbjct: 245 LVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQ 304

Query: 783 VSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK 842
            +                     +++  + + V                         I 
Sbjct: 305 FN---------------------IYNLRSGKLVHAN----------------------IL 321

Query: 843 GHFGPINSLAFHPDGKSYASGGEDGFVRLHTFD 875
                I S+ F       A+  +DG   L   D
Sbjct: 322 KDADQIWSVNFKGKTL-VAAVEKDGQSFLEILD 353

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (91), Expect = 0.001
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 20/134 (14%)

Query: 421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS--------- 471
           D Y+ITG     I  +D    + L  +SGH    +  ++++    +   ++         
Sbjct: 23  DNYVITGADDKMIRVYDSINKKFLLQLSGH-DGGVWALKYAHGGILVSGSTDRTVRVWDI 81

Query: 472 ----------HSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVN 521
                        +     D+   K+    +T S+D+T  ++       +  +  E    
Sbjct: 82  KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 141

Query: 522 SAALSPILPHVVLG 535
               +P      +G
Sbjct: 142 LVFHTPEENPYFVG 155

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 44.5 bits (103), Expect = 4e-05
 Identities = 16/184 (8%), Positives = 39/184 (21%), Gaps = 28/184 (15%)

Query: 422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPIND-----MQFSKDATMFITASHSQAV 476
            +  T     D         + L  +S  + +P  D       F   +  F+      + 
Sbjct: 171 IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSP 230

Query: 477 EPIN---DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE--RPVNSAALSPILPH 531
            P         S+     +      ++ +        +           +         +
Sbjct: 231 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 290

Query: 532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG 591
                 +         T+                  ++      +  L    D K+    
Sbjct: 291 YQGAPEKGVLLKYDVKTR------------------KVTEVKNNLTDLRLSADRKTVMVR 332

Query: 592 GEDG 595
            +DG
Sbjct: 333 KDDG 336

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 44.1 bits (102), Expect = 5e-05
 Identities = 29/315 (9%), Positives = 65/315 (20%), Gaps = 12/315 (3%)

Query: 563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDG---FLISNTLSNGLDISEGSFT--SSS 617
              +         I  +    D K     G        I +  +   +  E +     + 
Sbjct: 32  SGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAM 91

Query: 618 TQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSI 677
               +G            ++    +   T    S   +            I         
Sbjct: 92  GVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG 151

Query: 678 NHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSV-DASPLM 736
              G  +      + +  ++             + +     L+   +       D   L 
Sbjct: 152 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211

Query: 737 TWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA 796
               +   PF +          P  +  +       E     +  + S    D  +    
Sbjct: 212 FSFEVVSKPFVIPLIPGSP--NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMI 269

Query: 797 GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD 856
             L S                      K     Y +    +  ++      +  L    D
Sbjct: 270 IPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV----KTRKVTEVKNNLTDLRLSAD 325

Query: 857 GKSYASGGEDGFVRL 871
            K+     +DG +  
Sbjct: 326 RKTVMVRKDDGKIYT 340

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.5 bits (98), Expect = 2e-04
 Identities = 37/305 (12%), Positives = 75/305 (24%), Gaps = 38/305 (12%)

Query: 570 KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ 629
           +     I+ +   P          DG L              +      Q          
Sbjct: 8   QAPKDYISDIKIIPSKSLLLITSWDGSLTV------YKFDIQAKNVDLLQ---------S 52

Query: 630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPF 689
             + H L   +        ++ G+   +             A      N    R+     
Sbjct: 53  LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGD 112

Query: 690 DEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLD 749
           D+  +       ++   RN      +   L+ N    +        +       +   + 
Sbjct: 113 DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK------IFTMDTNSSRLIVG 166

Query: 750 GSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPD---FL 806
            +++ +        F++P              K   R      K   G+  S  D    +
Sbjct: 167 MNNSQV------QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV 220

Query: 807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 866
             FD   +   +S +        +         +      P+NS+ F P  K   + G D
Sbjct: 221 EFFDDQGDDYNSSKR--------FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272

Query: 867 GFVRL 871
           G +  
Sbjct: 273 GIISC 277

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (96), Expect = 3e-04
 Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 479 INDMQFSKDATMFITASKDHTAKLF----TTHDRQLLKTYTTERPVNSAALSPILPHVVL 534
           I+D++     ++ +  S D +  ++       +  LL++   + P+            + 
Sbjct: 14  ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73

Query: 535 GGGQ 538
            G  
Sbjct: 74  VGTV 77

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 0.002
 Identities = 11/111 (9%), Positives = 27/111 (24%), Gaps = 10/111 (9%)

Query: 417 WGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV 476
                +        G +         +  + S                   +    +   
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC----------HRLNLKDTNLA 251

Query: 477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSP 527
            P+N ++FS       TA  D     +    R+ +K +      +   ++ 
Sbjct: 252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIAC 302

>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus [TaxId: 984]} Length = 481

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Chondroitinase B
domain: Chondroitinase B
species: Pedobacter heparinus [TaxId: 984]

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 23/283 (8%), Positives = 52/283 (18%)

Query: 71  TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 130
            + N       +          +            +   +    T+   +     +   +
Sbjct: 79  KDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRID 138

Query: 131 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 190
             + T+  T        NT       +          +    +N     N          
Sbjct: 139 HCSFTDKITFDQVINLNNTARAIKDGSVGGPAMYHRVDHCFFSNPQKPGNAGGGIRIGYY 198

Query: 191 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 250
            N       ++N     ++     T+ +       NT  N     N     +     N  
Sbjct: 199 RNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQGTMNFRHGDHQVAINNFY 258

Query: 251 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTN 310
              +            +      N    + T  +              +      +    
Sbjct: 259 IGNDQRFGYGGMFVWGSRHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIA 318

Query: 311 TNTNTNTNTNTNTNTNTNTNTNTNTNTNTNTSTSTSTSTSTNN 353
            N   N N         +         N     +        N
Sbjct: 319 NNAFINVNGYAIHFNPLDERRKEYCAANRLKFETPHQLMLKGN 361

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.3 bits (92), Expect = 7e-04
 Identities = 13/86 (15%), Positives = 17/86 (19%), Gaps = 5/86 (5%)

Query: 807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 866
                 +      T V         +    +      H          P G   ASG   
Sbjct: 25  NTPAGDKIQYCNGTSV-----YTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79

Query: 867 GFVRLHTFDQAYFDYTFDISEEFHCQ 892
           G VR+    Q        I       
Sbjct: 80  GNVRIWDTTQTTHILKTTIPVFSGPV 105

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.7 bits (88), Expect = 0.002
 Identities = 6/56 (10%), Positives = 18/56 (32%)

Query: 421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV 476
              I +  A   I  W++   +  ++I    +     +         ++ S +  +
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.5 bits (90), Expect = 0.002
 Identities = 19/186 (10%), Positives = 51/186 (27%), Gaps = 11/186 (5%)

Query: 421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIN 480
           + + ++    G +  WD ++              ++         +      +  +  + 
Sbjct: 24  NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 83

Query: 481 DMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSP----ILPHVVLGG 536
              FS D   +    +D T K+       LL +   +    +         +L H ++  
Sbjct: 84  TTSFSGDLLFYRITREDETKKV-IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 142

Query: 537 GQEAR----EVTTTSTKVGKFDARF-YHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG 591
             +      +    + +       +   L  +              S+     G   A+G
Sbjct: 143 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL-IATG 201

Query: 592 GEDGFL 597
             +G +
Sbjct: 202 FNNGTV 207

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 0.002
 Identities = 28/257 (10%), Positives = 70/257 (27%), Gaps = 17/257 (6%)

Query: 490 MFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTK 549
             +T        L     ++++K   T   V+ + +S    +++         V     +
Sbjct: 34  FSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLL---------VIGRDAR 84

Query: 550 VGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDIS 609
           +   D          E           +S     + +   +G       +  + +G  + 
Sbjct: 85  IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFA--IMDGETLE 142

Query: 610 EGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS-----TSSTDTGGVFSGSRVDDSGVELTK 664
                S+     D   Y  +      ++SH       +  +TG V   +  D   + +T 
Sbjct: 143 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS 202

Query: 665 DEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPF 724
                   +    + S         +  +   +   ++   A   +       R      
Sbjct: 203 IGAAPFLAD-GGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261

Query: 725 DEQQSVDASPLMTWGHI 741
            +   V ++  +  G I
Sbjct: 262 PKYGPVWSTSHLGDGSI 278

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 0.003
 Identities = 26/305 (8%), Positives = 57/305 (18%), Gaps = 28/305 (9%)

Query: 568 RIKGHFGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVY 626
            I             P G+  YA+  +   L                    T +  G + 
Sbjct: 28  TIADAGPTPMVPMVAPGGRIAYATVNKSESL--------------VKIDLVTGETLGRID 73

Query: 627 PSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHV 686
            S           +  S D   +          +   + +   +A           R   
Sbjct: 74  LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAF 131

Query: 687 NPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPF 746
               +   +   +D         +  +            E + + +    T+   +    
Sbjct: 132 EAPRQITMLAWARDGSKLYG---LGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188

Query: 747 KLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFL 806
                 +              +    +  A        +             +       
Sbjct: 189 WNQHESSG--VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFST 246

Query: 807 FDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED 866
                          +  FD      I      +         S+    DG +   GG  
Sbjct: 247 AVNPAKTRAFGAYNVLESFDLEKNASI------KRVPLPHSYYSVNVSTDGSTVWLGGAL 300

Query: 867 GFVRL 871
           G +  
Sbjct: 301 GDLAA 305

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 0.003
 Identities = 15/116 (12%), Positives = 30/116 (25%), Gaps = 8/116 (6%)

Query: 482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAR 541
                   + ++ S D+T +L+       L+       +           +V G      
Sbjct: 182 ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN-KRIVSGAYDGKI 240

Query: 542 EVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFL 597
           +V      +          +       +  H G +  L F  D     S   D  +
Sbjct: 241 KVWDLVAALDPRAPAGTLCL-----RTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 289

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	894
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.96
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.95
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.95
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.95
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.95
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.95
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.94
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.93
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.92
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.92
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.91
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.91
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.91
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.91
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.9
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.88
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.88
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.87
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.86
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.85
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.81
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.8
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.8
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.77
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.77
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.74
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.72
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.69
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.69
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.57
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.56
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.44
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.29
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.26
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.23
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.2
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.03
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.92
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.89
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.83
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.83
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.81
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.79
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.77
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.77
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.71
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.71
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.68
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.67
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.63
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.61
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.1
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.06
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.87
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.83
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.61
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.6
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.57
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.56
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.55
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.51
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.46
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.44
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.27
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.26
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.21
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.14
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.07
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.07
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.32
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	96.25
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.19
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.08
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	96.04
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	95.92
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	95.69
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.38
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.32
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.24
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	94.71
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	94.17
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	91.58
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	90.31
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	89.18
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	86.91

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-36  Score=332.26  Aligned_cols=281  Identities=15%  Similarity=0.149  Sum_probs=238.4

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE-----EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE-----LESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~-----~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      +...+|...|.||+|+|+|++|++|+ ||.|+|||+..++.     .....+|.+                         
T Consensus        45 ~~~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~-------------------------   98 (337)
T d1gxra_          45 INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDN-------------------------   98 (337)
T ss_dssp             EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTS-------------------------
T ss_pred             EEECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCC-------------------------
Confidence            33448999999999999999999998 78999999976532     223345555                         


Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCC--cEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDR--QLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~--~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                      .|.+|+|+|+|++|++|+.||.|+|||+...  ++...+.. ...+.+++|++++.+|++++.++.              
T Consensus        99 ~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--------------  164 (337)
T d1gxra_          99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN--------------  164 (337)
T ss_dssp             BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC--------------
T ss_pred             cEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccc--------------
Confidence            7899999999999999999999999998754  44555554 578999999999999999999887              


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      |++|++..+++.....+|...|.+++|++++.+|++++.||.|++||++.++.+.                         
T Consensus       165 i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~-------------------------  219 (337)
T d1gxra_         165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ-------------------------  219 (337)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccceeec-------------------------
Confidence            8999999999999999999999999999999999999999999999986543110                         


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                                                                                                      
T Consensus       220 --------------------------------------------------------------------------------  219 (337)
T d1gxra_         220 --------------------------------------------------------------------------------  219 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCce
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKA  794 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~  794 (894)
                                                               ...|.+.|.+++|+|++++|++++.|+.|++||+...+.
T Consensus       220 -----------------------------------------~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~  258 (337)
T d1gxra_         220 -----------------------------------------QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK  258 (337)
T ss_dssp             -----------------------------------------EEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred             -----------------------------------------ccccccceEEEEEcccccccceecccccccccccccccc
Confidence                                                     001344578899999999999999999999999988877


Q ss_pred             eecc--ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEE
Q psy10063        795 TAGF--LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLH  872 (894)
Q Consensus       795 ~~~~--~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vW  872 (894)
                      ....  ...+..++|+++++++++++.|+    .|+|||+..++++..+. |.+.|.+++|+||+++||+|+.||.|+||
T Consensus       259 ~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg----~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vW  333 (337)
T d1gxra_         259 YQLHLHESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVY  333 (337)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred             ccccccccccceEEECCCCCEEEEEeCCC----eEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            5433  34456788999999999999887    59999999999887664 77899999999999999999999999999


Q ss_pred             ec
Q psy10063        873 TF  874 (894)
Q Consensus       873 dl  874 (894)
                      ||
T Consensus       334 dl  335 (337)
T d1gxra_         334 EV  335 (337)
T ss_dssp             EE
T ss_pred             EE
Confidence            97

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-36  Score=324.40  Aligned_cols=304  Identities=15%  Similarity=0.189  Sum_probs=245.8

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEE
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPIND  481 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~  481 (894)
                      ++.|+||.+.|.+|+|+|++++||+|+.||.|+|||+.++++++.+.+|..                         .|.+
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~-------------------------~V~~   64 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-------------------------SVQD   64 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSS-------------------------CEEE
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCC-------------------------cEEE
Confidence            346889999999999999999999999999999999999999999999988                         7888


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      ++|++++.+|+++..++.+.+|+....+....+.. ...+.++.|++++.+|++++.++.              +++||+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--------------~~~~~~  130 (317)
T d1vyhc1          65 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT--------------IKMWEV  130 (317)
T ss_dssp             EEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSE--------------EEEEET
T ss_pred             EeeecccccccccccccccccccccccccccccccccccceeeeccCCCceEEeeccCcc--------------eeEeec
Confidence            88889999999999999999999998887776664 678999999999999999999986              899999


Q ss_pred             cccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        561 IFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       561 ~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      +.++.+..+.+|...+.+++|++++.+|++++.||.|++|++..++.+..               +....+.+..+    
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~---------------~~~~~~~i~~~----  191 (317)
T d1vyhc1         131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE---------------LREHRHVVECI----  191 (317)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---------------ECCCSSCEEEE----
T ss_pred             ccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEE---------------EecCCCCceEE----
Confidence            99999999999999999999999999999999999999999976542210               00000000000    


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                            .+.+++....
T Consensus       192 ----------------------------------------------------------------------~~~~~~~~~~  201 (317)
T d1vyhc1         192 ----------------------------------------------------------------------SWAPESSYSS  201 (317)
T ss_dssp             ----------------------------------------------------------------------EECCSCGGGG
T ss_pred             ----------------------------------------------------------------------EEeeccccce
Confidence                                                                                  0000000000


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-  799 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-  799 (894)
                                                          ...........+...+.++++++.|+.|++|++..++.+..+. 
T Consensus       202 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~  245 (317)
T d1vyhc1         202 ------------------------------------ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG  245 (317)
T ss_dssp             ------------------------------------GGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             ------------------------------------eeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeC
Confidence                                                0000011122233567899999999999999999988766544 


Q ss_pred             --cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEe
Q psy10063        800 --LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       800 --~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                        ..+..++|++++++|++++.++    .|+|||+..++++..+.+|.+.|.+|+|+||+++||+||.||.|+|||
T Consensus       246 ~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         246 HDNWVRGVLFHSGGKFILSCADDK----TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             CSSCEEEEEECSSSSCEEEEETTT----EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCCCEEEEEECCCCCEEEEEECCC----eEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence              3455678999999999999887    699999999999999999999999999999999999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-36  Score=334.06  Aligned_cols=309  Identities=16%  Similarity=0.201  Sum_probs=239.6

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      ...+|.+.|.||+|+|||++||+|+ |+.|+|||+.+++.+..+..+.. .....      ..+......+....|.+|+
T Consensus        57 ~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~V~~l~  128 (388)
T d1erja_          57 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSA-ANKDP------ENLNTSSSPSSDLYIRSVC  128 (388)
T ss_dssp             EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------CCCCBEEEEE
T ss_pred             eeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccc-ccccc------cccccccccCCCCCEEEEE
Confidence            3447999999999999999999997 88999999999999999887654 11111      1111111122224799999


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      |+|+|++|++|+.||.|++||...++.+..+.. ...|.+++|++++..+++++.++.              +++||++.
T Consensus       129 ~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~--------------i~~~d~~~  194 (388)
T d1erja_         129 FSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT--------------VRIWDLRT  194 (388)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE--------------EEEEETTT
T ss_pred             ECCCCCcceeccccccccccccccccccccccccccccccccccccccccccccccee--------------eeeeeccc
Confidence            999999999999999999999999999988874 688999999999999999999886              88999998


Q ss_pred             cceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        563 EEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       563 ~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      ...+.....+...+..+.+.+++.+|++|+.||.|++|+++.+..+.                         .+.     
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~-------------------------~~~-----  244 (388)
T d1erja_         195 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE-------------------------RLD-----  244 (388)
T ss_dssp             TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE-------------------------EEC-----
T ss_pred             cccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccce-------------------------eec-----
Confidence            88887776666555444445588999999999999999987643210                         000     


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                                                                                      
T Consensus       245 --------------------------------------------------------------------------------  244 (388)
T d1erja_         245 --------------------------------------------------------------------------------  244 (388)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeec-----
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAG-----  797 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~-----  797 (894)
                                                  .......+|.+.|.+++|+|++++|++++.|+.|++||+...+....     
T Consensus       245 ----------------------------~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~  296 (388)
T d1erja_         245 ----------------------------SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN  296 (388)
T ss_dssp             ----------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred             ----------------------------cccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccccc
Confidence                                        00012345778899999999999999999999999999876544221     


Q ss_pred             ----------cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEE------eeCCcEEE
Q psy10063        798 ----------FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF------HPDGKSYA  861 (894)
Q Consensus       798 ----------~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~f------Spdg~~La  861 (894)
                                +...+..++|++++++|++++.++    .|+|||+++++++..+++|.+.|.+|+|      +||+.+||
T Consensus       297 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg----~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~  372 (388)
T d1erja_         297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR----GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA  372 (388)
T ss_dssp             --CEEEEEECCSSCEEEEEECGGGCEEEEEETTS----EEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred             ccceeeecccccceEEEEEECCCCCEEEEEeCCC----EEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEE
Confidence                      122345678999999999999887    6999999999999999999999999975      57899999


Q ss_pred             EecCCCcEEEEecCc
Q psy10063        862 SGGEDGFVRLHTFDQ  876 (894)
Q Consensus       862 S~s~Dg~V~vWdl~~  876 (894)
                      +||.||.|+||++++
T Consensus       373 s~s~Dg~I~iW~~~k  387 (388)
T d1erja_         373 TGSGDCKARIWKYKK  387 (388)
T ss_dssp             EEETTSEEEEEEEEE
T ss_pred             EEeCCCEEEEEeeee
Confidence            999999999999853

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.3e-34  Score=312.03  Aligned_cols=286  Identities=14%  Similarity=0.228  Sum_probs=242.4

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ..+..|+||.+.|.+|+|+|++++||+|+.||.|+|||+.+++.++.+.+|..                         .|
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~-------------------------~v  100 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS-------------------------WV  100 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCS-------------------------CE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccc-------------------------cE
Confidence            45668999999999999999999999999999999999999999999999987                         78


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCC----cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDR----QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~----~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .+++|+|++.+|++|+.|+.|++|+....    +....+..+..+..+.+...+..++....+..              .
T Consensus       101 ~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~  166 (340)
T d1tbga_         101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--------------C  166 (340)
T ss_dssp             EEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTE--------------E
T ss_pred             EeeEeeccceeeeeecccceeecccccccccccccceeccccccccccccccccccccccccccc--------------c
Confidence            88889999999999999999999997653    34455555555555555555667777777765              5


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      +.+.............+...+..+.+.+.+.++++|+.|+.|++||++.++.+                           
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~---------------------------  219 (340)
T d1tbga_         167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR---------------------------  219 (340)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE---------------------------
T ss_pred             cccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEE---------------------------
Confidence            66776666666777788889999999999999999999999999998654210                           


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                                                                                                      
T Consensus       220 --------------------------------------------------------------------------------  219 (340)
T d1tbga_         220 --------------------------------------------------------------------------------  219 (340)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                                                            ..+.+|...|.+++|+|++.+|++|+.|+.|++|++...+.+
T Consensus       220 --------------------------------------~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~  261 (340)
T d1tbga_         220 --------------------------------------QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL  261 (340)
T ss_dssp             --------------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             --------------------------------------EEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccc
Confidence                                                  012346778999999999999999999999999999988775


Q ss_pred             eccc-----cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        796 AGFL-----LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       796 ~~~~-----~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      ..+.     ..+..++|++++.+|++++.++    .|+|||+..++++..+.+|.++|.+|+|+||+++||+||.||.|+
T Consensus       262 ~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg----~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~  337 (340)
T d1tbga_         262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK  337 (340)
T ss_dssp             EEECCTTCCSCEEEEEECSSSCEEEEEETTS----CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             cccccccccCceEEEEECCCCCEEEEEECCC----EEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEE
Confidence            5432     2345678999999999999887    599999999999999999999999999999999999999999999


Q ss_pred             EEe
Q psy10063        871 LHT  873 (894)
Q Consensus       871 vWd  873 (894)
                      |||
T Consensus       338 iWd  340 (340)
T d1tbga_         338 IWN  340 (340)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.7e-34  Score=312.66  Aligned_cols=282  Identities=12%  Similarity=0.069  Sum_probs=235.5

Q ss_pred             cCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        407 DQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      .+.+.+.+++++|+|+.|+.+. ++.|.|||+..++..+.+.+|..                         .|.+++|+|
T Consensus        15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~-------------------------~v~~~~~sp   68 (311)
T d1nr0a1          15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSH-------------------------QTTVAKTSP   68 (311)
T ss_dssp             CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSS-------------------------CEEEEEECT
T ss_pred             CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCC-------------------------CEEEEEEeC
Confidence            3556778899999999999986 55799999999999999999988                         789999999


Q ss_pred             CCCEEEEEECCCCEEEEEcCCCcEE--EEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQLL--KTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~~~--~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      +|++||+|+.||.|+|||+..++.+  ..+. |...|.+++|++++++|++++.+...            .+++|+++.+
T Consensus        69 ~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~------------~~~v~~~~~~  136 (311)
T d1nr0a1          69 SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER------------FGHVFLFDTG  136 (311)
T ss_dssp             TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC------------SEEEEETTTC
T ss_pred             CCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccc------------cccccccccc
Confidence            9999999999999999999987654  3344 56899999999999999999865431            1789999999


Q ss_pred             ceEEEccCCCCCeEEEEEecCCCE-EEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCC
Q psy10063        564 EEFARIKGHFGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTS  642 (894)
Q Consensus       564 ~~~~~l~~h~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~  642 (894)
                      +.+..+.+|...|.+++|+|++++ |++|+.||.|++||++.++.+                                  
T Consensus       137 ~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~----------------------------------  182 (311)
T d1nr0a1         137 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK----------------------------------  182 (311)
T ss_dssp             CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE----------------------------------
T ss_pred             cccccccccccccccccccccceeeecccccccccccccccccccc----------------------------------
Confidence            999999999999999999999885 888999999999998643210                                  


Q ss_pred             CCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEec
Q psy10063        643 STDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVN  722 (894)
Q Consensus       643 ~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~  722 (894)
                                                                                                      
T Consensus       183 --------------------------------------------------------------------------------  182 (311)
T d1nr0a1         183 --------------------------------------------------------------------------------  182 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc---
Q psy10063        723 PFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL---  799 (894)
Q Consensus       723 ~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~---  799 (894)
                                                     ..+.+|...|.+++++|++++|++++.|+.|++|+......+..+.   
T Consensus       183 -------------------------------~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~  231 (311)
T d1nr0a1         183 -------------------------------STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS  231 (311)
T ss_dssp             -------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT
T ss_pred             -------------------------------cccccccccccccccCccccccccccccccccccccccccccccccccc
Confidence                                           0123466778999999999999999999999999998876654332   


Q ss_pred             -------cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCC-CeeEEEEeeCCcEEEEecCCCcEEE
Q psy10063        800 -------LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG-PINSLAFHPDGKSYASGGEDGFVRL  871 (894)
Q Consensus       800 -------~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~-~V~~l~fSpdg~~LaS~s~Dg~V~v  871 (894)
                             ..+..++|++++++|++++.|+    .|+|||++++++++.+..|.. ....+.+.+++.+|++++.||.|+|
T Consensus       232 ~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg----~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~  307 (311)
T d1nr0a1         232 LKNVAHSGSVFGLTWSPDGTKIASASADK----TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF  307 (311)
T ss_dssp             SSSCSSSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEE
T ss_pred             cccccccccccccccCCCCCEEEEEeCCC----eEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEE
Confidence                   2345788999999999999887    699999999999999887654 3344556666788999999999999


Q ss_pred             EecC
Q psy10063        872 HTFD  875 (894)
Q Consensus       872 Wdl~  875 (894)
                      ||++
T Consensus       308 wd~d  311 (311)
T d1nr0a1         308 VNPE  311 (311)
T ss_dssp             EETT
T ss_pred             EeCC
Confidence            9975

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7e-34  Score=315.49  Aligned_cols=302  Identities=13%  Similarity=0.058  Sum_probs=227.2

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCe--EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEe
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGR--ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFS  485 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~--~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~s  485 (894)
                      +.++|.|++|+|||++||+|+.||.|+|||+..++  ++..|++|.+                         .|.+|+|+
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~-------------------------~V~~l~fs   60 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-------------------------QVTGVDWA   60 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS-------------------------CEEEEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCC-------------------------CEEEEEEC
Confidence            45789999999999999999999999999998775  5777889988                         78999999


Q ss_pred             cCCCEEEEEECCCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        486 KDATMFITASKDHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       486 pdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      |++++|++|+.|+.|+|||+..+.....+.   +...|.+++|+|++++|++++.++.              |++|++..
T Consensus        61 p~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~--------------i~i~~~~~  126 (371)
T d1k8kc_          61 PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV--------------ISICYFEQ  126 (371)
T ss_dssp             TTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS--------------EEEEEEET
T ss_pred             CCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCc--------------ceeeeeec
Confidence            999999999999999999999887665543   3578999999999999999999998              55555444


Q ss_pred             cc----eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEec
Q psy10063        563 EE----EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSS  638 (894)
Q Consensus       563 ~~----~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~  638 (894)
                      ..    ......+|...|.+++|+|++++|++|+.||.|++|++...........                         
T Consensus       127 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~-------------------------  181 (371)
T d1k8kc_         127 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP-------------------------  181 (371)
T ss_dssp             TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCC-------------------------
T ss_pred             ccccccccccccccccccccccccccccceeccccCcEEEEEeeccCcccccccc-------------------------
Confidence            32    2334567999999999999999999999999999999865431100000                         


Q ss_pred             ccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCE
Q psy10063        639 HSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTR  718 (894)
Q Consensus       639 ~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~  718 (894)
                                            ..|.                                                      
T Consensus       182 ----------------------~~~~------------------------------------------------------  185 (371)
T d1k8kc_         182 ----------------------TPWG------------------------------------------------------  185 (371)
T ss_dssp             ----------------------BTTB------------------------------------------------------
T ss_pred             ----------------------cccc------------------------------------------------------
Confidence                                  0000                                                      


Q ss_pred             EEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc
Q psy10063        719 LHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF  798 (894)
Q Consensus       719 l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~  798 (894)
                                                .....+.......+|...|.+++|+|++++|++++.|+.|++||+...+.+..+
T Consensus       186 --------------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~  239 (371)
T d1k8kc_         186 --------------------------SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL  239 (371)
T ss_dssp             --------------------------SCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred             --------------------------ccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeee
Confidence                                      000001111223467788999999999999999999999999999988876654


Q ss_pred             c---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceee------------------------------------
Q psy10063        799 L---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFA------------------------------------  839 (894)
Q Consensus       799 ~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~------------------------------------  839 (894)
                      .   ..+..++|++|++.++++..+..   .+..|+...+++..                                    
T Consensus       240 ~~~~~~v~s~~fs~d~~~la~g~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (371)
T d1k8kc_         240 ASETLPLLAVTFITESSLVAAGHDCFP---VLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA  316 (371)
T ss_dssp             ECSSCCEEEEEEEETTEEEEEETTSSC---EEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred             ecccccceeeeecCCCCEEEEEcCCce---EEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccc
Confidence            4   34557889999988876653321   23334432221100                                    


Q ss_pred             ---eccCCCCCeeEEEEeeCC----cEEEEecCCCcEEEEecCccc
Q psy10063        840 ---RIKGHFGPINSLAFHPDG----KSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       840 ---~l~gH~~~V~~l~fSpdg----~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                         ....|.+.|.+|++.+++    ..|+|+|.||.|+||+++..+
T Consensus       317 ~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~  362 (371)
T d1k8kc_         317 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  362 (371)
T ss_dssp             -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             cceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcCh
Confidence               012488999999999866    368999999999999996543

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.4e-33  Score=303.63  Aligned_cols=303  Identities=18%  Similarity=0.167  Sum_probs=237.9

Q ss_pred             EEEEEecCCCCE-EEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---
Q psy10063        401 VKMQVTDQSAKI-TSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---  476 (894)
Q Consensus       401 ~~~~l~~H~~~V-~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---  476 (894)
                      .+..|+||.+.| .|++  +++++||+|+.||.|+|||+.++++++.|.+|.+ .|.+|+|+++ .+|++++.|+.+   
T Consensus         4 ~~~tL~GH~~~vitc~~--~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~-~V~~l~~s~~-~~l~s~s~D~~i~iw   79 (355)
T d1nexb2           4 QRTTLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSINKKFLLQLSGHDG-GVWALKYAHG-GILVSGSTDRTVRVW   79 (355)
T ss_dssp             EEEEEECCSSSCEEEEE--EETTEEEEEETTTEEEEEETTTTEEEEEEECCSS-CEEEEEEETT-TEEEEEETTCCEEEE
T ss_pred             CcEEECCcCCCcEEEEE--ECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCC-CEEEEEEcCC-CEEEEEecccccccc
Confidence            356799999886 5554  5689999999999999999999999999999998 9999999986 589999999987   


Q ss_pred             -----------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC----------------------
Q psy10063        477 -----------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE----------------------  517 (894)
Q Consensus       477 -----------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~----------------------  517 (894)
                                       ..+..+.+.+++.+|++++.|+.|++||++.+..+......                      
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (355)
T d1nexb2          80 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  159 (355)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred             cccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence                             23456677889999999999999999999876654332210                      


Q ss_pred             CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy10063        518 RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFL  597 (894)
Q Consensus       518 ~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I  597 (894)
                      .......+.+++.+++.+..++.              |++||+..++.+..+.++...+.++.|++++.++++++.|+.|
T Consensus       160 ~~~~v~~~~~~~~~~~~~~~d~~--------------i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i  225 (355)
T d1nexb2         160 HMASVRTVSGHGNIVVSGSYDNT--------------LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI  225 (355)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             ccccccccccccceeeeecccce--------------eeeeecccccceeeeeccccccccccccccceeeecccccceE
Confidence            01123345667888888888886              8999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccc
Q psy10063        598 ISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSI  677 (894)
Q Consensus       598 ~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~  677 (894)
                      ++|+++.+..+                                                                     
T Consensus       226 ~i~d~~~~~~~---------------------------------------------------------------------  236 (355)
T d1nexb2         226 RIWDLENGELM---------------------------------------------------------------------  236 (355)
T ss_dssp             EEEETTTCCEE---------------------------------------------------------------------
T ss_pred             Eeeeccccccc---------------------------------------------------------------------
Confidence            99998654211                                                                     


Q ss_pred             cCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceec
Q psy10063        678 NHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILA  757 (894)
Q Consensus       678 ~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~  757 (894)
                                                                                                  ..+.
T Consensus       237 ----------------------------------------------------------------------------~~~~  240 (355)
T d1nexb2         237 ----------------------------------------------------------------------------YTLQ  240 (355)
T ss_dssp             ----------------------------------------------------------------------------EEEC
T ss_pred             ----------------------------------------------------------------------------cccc
Confidence                                                                                        0123


Q ss_pred             CCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc-ccCCCce-EeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        758 GPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF-LLSCPDF-LFDFDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       758 ~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~-~~~~~~~-~fS~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      +|...|.+++++  +++|++++.||.|++||+.+....... ......+ ++++++.++++++ |+    .|+|||+++|
T Consensus       241 ~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-d~----~i~vwd~~tg  313 (355)
T d1nexb2         241 GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-EN----QFNIYNLRSG  313 (355)
T ss_dssp             CCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEE-TT----EEEEEETTTC
T ss_pred             cccccccccccc--cceeeeeecccccccccccccceecccccCCceEEEEEcCCCCEEEEEe-CC----EEEEEECCCC
Confidence            456667778876  479999999999999999988764433 3333333 4677777666554 54    5999999999


Q ss_pred             ceee-eccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEec
Q psy10063        836 EEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTF  874 (894)
Q Consensus       836 ~~l~-~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl  874 (894)
                      +++. .+.+|.++|.+|+|+++ .+|++++.||.++||.+
T Consensus       314 ~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         314 KLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             CBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             CEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence            9985 57899999999999986 57888999999777654

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.6e-32  Score=293.75  Aligned_cols=186  Identities=18%  Similarity=0.241  Sum_probs=156.5

Q ss_pred             eEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEec-CCCCCCeeEEEEcCCCCEEEEEeCCCCc--
Q psy10063        400 VVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESIS-GHAKEPINDMQFSKDATMFITASHSQAV--  476 (894)
Q Consensus       400 ~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~-~h~~~~V~~v~~spdg~~la~~~~d~~i--  476 (894)
                      .+...+.||.+.|.+|+|+|||++|++|+.||.|+|||+.++++++.+. +|.. .|.+++|+|+|++++++ .|+.+  
T Consensus         3 ~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~-~v~~v~~~~~g~~~~~~-~d~~v~~   80 (299)
T d1nr0a2           3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT-MITGIKTTSKGDLFTVS-WDDHLKV   80 (299)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSS-CEEEEEECTTSCEEEEE-TTTEEEE
T ss_pred             ccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCC-cEEEEEeeccceeeccc-ceeeEEE
Confidence            5677899999999999999999999999999999999999999998885 5666 99999999999866554 44433  


Q ss_pred             -------------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        477 -------------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       477 -------------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                                         ..+.+++|+++|+++++++ ++.+++|+..   ....+.....+.+++|+|++++|++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l~~g~~  156 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHG---KLTEVPISYNSSCVALSNDKQFVAVGGQ  156 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETT---EEEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred             eccCCccccccccccccccccccccccccccccccccc-cccccccccc---cccccccccccccccccccccccccccc
Confidence                               4678999999999777665 5689999854   2333445667899999999999999999


Q ss_pred             CCCeEEEeccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ++.              |++||++.++... ....|...|.+++|++++++|++++.||.|++|++..+
T Consensus       157 dg~--------------i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~  211 (299)
T d1nr0a2         157 DSK--------------VHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN  211 (299)
T ss_dssp             TSE--------------EEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred             ccc--------------cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            986              8888888766543 34578999999999999999999999999999998543

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.3e-32  Score=292.21  Aligned_cols=272  Identities=17%  Similarity=0.219  Sum_probs=220.6

Q ss_pred             ceeeeeccCccEEEecCCCeE----------EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE--EEEec
Q psy10063        381 DRLNSMSPAARKLATNAEPVV----------KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE--LESIS  448 (894)
Q Consensus       381 ~~~~~~s~dg~~l~~~~~~~~----------~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~  448 (894)
                      ..+++++|+|+.|+...+..+          ...+.+|.+.|.+++|+|+|++||+|+.||.|+|||+..++.  ...+.
T Consensus        20 ~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~   99 (311)
T d1nr0a1          20 AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIP   99 (311)
T ss_dssp             CCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEE
T ss_pred             eEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccc
Confidence            345678888888877654332          236789999999999999999999999999999999988764  35577


Q ss_pred             CCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEE
Q psy10063        449 GHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAAL  525 (894)
Q Consensus       449 ~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~  525 (894)
                      +|..                         .|.+|+|+|++++|++++.  ++.++||+++.++.+..+.. ...|.+++|
T Consensus       100 ~~~~-------------------------~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~  154 (311)
T d1nr0a1         100 VFSG-------------------------PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF  154 (311)
T ss_dssp             CSSS-------------------------CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE
T ss_pred             cccC-------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7877                         6778888888888888875  45699999999988887775 578999999


Q ss_pred             cCCCCE-EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        526 SPILPH-VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       526 spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      +|++++ |++++.++.              |++||++.++.+..+.+|...|.+++|+|++++|++++.||.|++|++..
T Consensus       155 ~~~~~~~l~sgs~d~~--------------i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~  220 (311)
T d1nr0a1         155 KPSRPFRIISGSDDNT--------------VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD  220 (311)
T ss_dssp             CSSSSCEEEEEETTSC--------------EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             cccceeeecccccccc--------------cccccccccccccccccccccccccccCcccccccccccccccccccccc
Confidence            999986 666777776              89999999999999999999999999999999999999999999999865


Q ss_pred             CccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeE
Q psy10063        605 GLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRL  684 (894)
Q Consensus       605 ~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~  684 (894)
                      +..+.                         .+.                                               
T Consensus       221 ~~~~~-------------------------~~~-----------------------------------------------  228 (311)
T d1nr0a1         221 GTKTG-------------------------VFE-----------------------------------------------  228 (311)
T ss_dssp             CCEEE-------------------------ECB-----------------------------------------------
T ss_pred             ccccc-------------------------ccc-----------------------------------------------
Confidence            43110                         000                                               


Q ss_pred             EeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceE
Q psy10063        685 HVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGF  764 (894)
Q Consensus       685 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~  764 (894)
                                                                                        .......+|.+.|.
T Consensus       229 ------------------------------------------------------------------~~~~~~~~h~~~V~  242 (311)
T d1nr0a1         229 ------------------------------------------------------------------DDSLKNVAHSGSVF  242 (311)
T ss_dssp             ------------------------------------------------------------------CTTSSSCSSSSCEE
T ss_pred             ------------------------------------------------------------------cccccccccccccc
Confidence                                                                              00012345788899


Q ss_pred             EEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCC----CceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        765 KMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSC----PDFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       765 ~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~----~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      +|+|+|++++|++|+.||.|+|||+.+++++..+....    ..+.+.+++.++++++.++    .|++||.+
T Consensus       243 ~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG----~i~~wd~d  311 (311)
T d1nr0a1         243 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG----FINFVNPE  311 (311)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC----CEEEEETT
T ss_pred             ccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCC----EEEEEeCC
Confidence            99999999999999999999999999998876554332    3455778889999999887    59999974

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-31  Score=285.49  Aligned_cols=302  Identities=16%  Similarity=0.207  Sum_probs=236.9

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-----
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-----  476 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-----  476 (894)
                      ...|+||.+.|.+ +++++|++||+|+.||.|+|||+.++++++.+.+|.. .|.+++|+++  +|++++.|+.+     
T Consensus         9 ~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~-~V~~v~~~~~--~l~s~s~D~~~~~~~~   84 (342)
T d2ovrb2           9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-GVWSSQMRDN--IIISGSTDRTLKVWNA   84 (342)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSS-CEEEEEEETT--EEEEEETTSCEEEEET
T ss_pred             CEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCC-CEEEEEeCCC--ccccceeccccccccc
Confidence            3468899999865 4777899999999999999999999999999999998 9999999874  88999988876     


Q ss_pred             -------------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        477 -------------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       477 -------------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                                   ..+...  ......++.+..|+.|.+|+...++....+........ .+......++.++.++.   
T Consensus        85 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~---  158 (342)
T d2ovrb2          85 ETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFM---  158 (342)
T ss_dssp             TTTEEEEEECCCSSCEEEE--EEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE-EEEECSSCEEEEETTSC---
T ss_pred             ccccceecccccceeEeee--ecccccccccccceeEEEeecccccceeeeecccccce-eeccccceeeeecCCCe---
Confidence                         122222  22356778888999999999998888877765443333 33445667888888886   


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCC
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDG  623 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg  623 (894)
                                 |++||+...+.+..+.+|...+..+.+  ++.+|++|+.||.|++||++.++.+               
T Consensus       159 -----------i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~---------------  210 (342)
T d2ovrb2         159 -----------VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI---------------  210 (342)
T ss_dssp             -----------EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE---------------
T ss_pred             -----------EEEeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceee---------------
Confidence                       888999988888888888877666554  7889999999999999998653211               


Q ss_pred             cEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcce
Q psy10063        624 LVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQI  703 (894)
Q Consensus       624 ~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~  703 (894)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (342)
T d2ovrb2         211 --------------------------------------------------------------------------------  210 (342)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCc
Q psy10063        704 EMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKV  783 (894)
Q Consensus       704 ~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~  783 (894)
                                                                        ..+.+|...+.+++++  +.+|++++.|+.
T Consensus       211 --------------------------------------------------~~~~~~~~~v~~~~~~--~~~l~s~s~d~~  238 (342)
T d2ovrb2         211 --------------------------------------------------HTLTGHQSLTSGMELK--DNILVSGNADST  238 (342)
T ss_dssp             --------------------------------------------------EEECCCCSCEEEEEEE--TTEEEEEETTSC
T ss_pred             --------------------------------------------------eEecccccceeEEecC--CCEEEEEcCCCE
Confidence                                                              0122344456666654  569999999999


Q ss_pred             EEEEEccCCceeecccc----CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeecc-----CCCCCeeEEEEe
Q psy10063        784 SERYRDRKNKATAGFLL----SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIK-----GHFGPINSLAFH  854 (894)
Q Consensus       784 I~iwd~~~~~~~~~~~~----~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~-----gH~~~V~~l~fS  854 (894)
                      |++|++...+....+..    .....++++++.++++++.|+    .|+|||+++|++++.+.     +|.+.|++|+|+
T Consensus       239 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg----~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s  314 (342)
T d2ovrb2         239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG----TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRAS  314 (342)
T ss_dssp             EEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS----EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEEC
T ss_pred             EEEEecccccccccccccceeeeceeecccCCCeeEEEcCCC----EEEEEECCCCCEEEEEecccCCCCCCCEEEEEEC
Confidence            99999988776554432    223456788899999999887    69999999999987763     688899999999


Q ss_pred             eCCcEEEEecCCCc----EEEEecCcc
Q psy10063        855 PDGKSYASGGEDGF----VRLHTFDQA  877 (894)
Q Consensus       855 pdg~~LaS~s~Dg~----V~vWdl~~~  877 (894)
                      |++.+||+|+.||.    |++||++..
T Consensus       315 ~~~~~la~g~~dGt~~~~l~~~Df~~~  341 (342)
T d2ovrb2         315 NTKLVCAVGSRNGTEETKLLVLDFDVD  341 (342)
T ss_dssp             SSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             CCCCEEEEEeCCCCCeeEEEEEeCCCC
Confidence            99999999999985    999999753

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-31  Score=286.19  Aligned_cols=211  Identities=18%  Similarity=0.232  Sum_probs=188.2

Q ss_pred             ccceeeeeccCccEEEecCCCeEEE---------------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC--C
Q psy10063        379 SVDRLNSMSPAARKLATNAEPVVKM---------------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM--G  441 (894)
Q Consensus       379 ~~~~~~~~s~dg~~l~~~~~~~~~~---------------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t--g  441 (894)
                      .....++|+++|++|+.++++.+++               ...+|.+.|.+|+|+|||++|++|+.||.|+|||+..  +
T Consensus        52 ~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~  131 (337)
T d1gxra_          52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP  131 (337)
T ss_dssp             SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--
T ss_pred             CcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccccccc
Confidence            4456678999999999988766555               2346889999999999999999999999999999874  4


Q ss_pred             eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEEE
Q psy10063        442 RELESISGHAKEPINDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKLF  503 (894)
Q Consensus       442 ~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~iw  503 (894)
                      +....+..|.. .|.+++|++++.+|++++.++.+                  ..|.+++|++++.+|++|+.|+.|++|
T Consensus       132 ~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~  210 (337)
T d1gxra_         132 RIKAELTSSAP-ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSW  210 (337)
T ss_dssp             EEEEEEECSSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            56777888887 99999999999999999998876                  579999999999999999999999999


Q ss_pred             EcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEec
Q psy10063        504 TTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  583 (894)
Q Consensus       504 dl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp  583 (894)
                      |++.++.++.+.+...|.+++|+|++++|++++.++.              +++||+..++.. ....|...|.+++|+|
T Consensus       211 d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~--------------i~i~d~~~~~~~-~~~~~~~~i~~v~~s~  275 (337)
T d1gxra_         211 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN--------------VEVLHVNKPDKY-QLHLHESCVLSLKFAY  275 (337)
T ss_dssp             ETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC--------------EEEEETTSSCEE-EECCCSSCEEEEEECT
T ss_pred             ccccceeecccccccceEEEEEcccccccceeccccc--------------cccccccccccc-cccccccccceEEECC
Confidence            9999999999999999999999999999999999987              888999877765 4567999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCC
Q psy10063        584 DGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       584 dg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +|++|++++.||.|++||+..+
T Consensus       276 ~g~~l~s~s~Dg~i~iwd~~~~  297 (337)
T d1gxra_         276 CGKWFVSTGKDNLLNAWRTPYG  297 (337)
T ss_dssp             TSSEEEEEETTSEEEEEETTTC
T ss_pred             CCCEEEEEeCCCeEEEEECCCC
Confidence            9999999999999999998654

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.2e-29  Score=275.71  Aligned_cols=283  Identities=11%  Similarity=0.055  Sum_probs=217.2

Q ss_pred             CCEEEEEEccCCCEEEEecCCC-cEEEEecCCC--eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEec
Q psy10063        410 AKITSLLWGNLDQYIITGHAKG-DICTWDLRMG--RELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSK  486 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg-~I~iWd~~tg--~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~sp  486 (894)
                      +.+.+|+|+|+|++|+.++.+. .|+.||....  ..+..+.+|...                        .|.+++|+|
T Consensus        18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~------------------------~v~~v~fsP   73 (325)
T d1pgua1          18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSS------------------------VVTTVKFSP   73 (325)
T ss_dssp             TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTS------------------------CEEEEEECS
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCC------------------------CEEEEEEee
Confidence            3567899999999999886553 3566765443  346777887542                        577777776


Q ss_pred             --CCCEEEEEECCCCEEEEEcCCCcEEE--------EEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        487 --DATMFITASKDHTAKLFTTHDRQLLK--------TYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       487 --dg~~L~sgs~Dg~V~iwdl~~~~~~~--------~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                        +|.+|++|+.||.|+|||+..++...        .+. +.++|.+++|+++|++|++++.+...            .+
T Consensus        74 ~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~------------~~  141 (325)
T d1pgua1          74 IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN------------FG  141 (325)
T ss_dssp             STTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC------------SE
T ss_pred             CCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccc------------eE
Confidence              67899999999999999997654321        122 45789999999999999988765421            17


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCE-EEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIH  634 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~  634 (894)
                      ++|++..++++..+.+|...|.+++|++++.+ +++++.|+.|++|++...+...                         
T Consensus       142 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~-------------------------  196 (325)
T d1pgua1         142 VFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA-------------------------  196 (325)
T ss_dssp             EEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE-------------------------
T ss_pred             EEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccce-------------------------
Confidence            88999999999999999999999999998875 7789999999999975432100                         


Q ss_pred             EEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcC
Q psy10063        635 SLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINH  714 (894)
Q Consensus       635 ~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~  714 (894)
                      .                                                                               
T Consensus       197 ~-------------------------------------------------------------------------------  197 (325)
T d1pgua1         197 S-------------------------------------------------------------------------------  197 (325)
T ss_dssp             E-------------------------------------------------------------------------------
T ss_pred             e-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCC-CCEEEEecCCCcEEEEEccCCc
Q psy10063        715 SGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPK-REKLALALADKVSERYRDRKNK  793 (894)
Q Consensus       715 ~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spd-g~~Latgs~Dg~I~iwd~~~~~  793 (894)
                                                            .....+|...|.+++|+|+ +.+|++++.|+.|++||++.++
T Consensus       198 --------------------------------------~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~  239 (325)
T d1pgua1         198 --------------------------------------DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE  239 (325)
T ss_dssp             --------------------------------------ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred             --------------------------------------cccccCCCCccEEeeeccccceeccccccccceeeeeecccc
Confidence                                                  0012346677899999997 6889999999999999999888


Q ss_pred             eeeccc---cCCCceEee---cCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCC--eeEEEEeeC-CcEEEEec
Q psy10063        794 ATAGFL---LSCPDFLFD---FDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP--INSLAFHPD-GKSYASGG  864 (894)
Q Consensus       794 ~~~~~~---~~~~~~~fS---~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~--V~~l~fSpd-g~~LaS~s  864 (894)
                      .+..+.   ..+..++|+   +||++|++++.|+    .|+|||++.++++..+..|...  +..++|.+. +.+|+++|
T Consensus       240 ~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s  315 (325)
T d1pgua1         240 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA----TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS  315 (325)
T ss_dssp             EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS----EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred             ccccccccccccccceeeeeccCCCEEEEEeCCC----eEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEE
Confidence            765543   345556666   7899999999887    6999999999999888776654  444555433 34799999


Q ss_pred             CCCcEEEEec
Q psy10063        865 EDGFVRLHTF  874 (894)
Q Consensus       865 ~Dg~V~vWdl  874 (894)
                      .||.|+||||
T Consensus       316 ~dg~i~vwdl  325 (325)
T d1pgua1         316 LDGTLNFYEL  325 (325)
T ss_dssp             TTSCEEEEET
T ss_pred             CCCEEEEEEC
Confidence            9999999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=6e-29  Score=275.56  Aligned_cols=281  Identities=19%  Similarity=0.200  Sum_probs=222.1

Q ss_pred             CCccceeeeeccCccEEEecCCCeEEEE----------------------------EecCCCCEEEEEEccCCCEEEEec
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEPVVKMQ----------------------------VTDQSAKITSLLWGNLDQYIITGH  428 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~----------------------------l~~H~~~V~~l~~spdg~~L~sgs  428 (894)
                      +.+....++|++||++|+.+.++.+++.                            ..+|...|.+|+|+|+|++|++|+
T Consensus        61 H~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~  140 (388)
T d1erja_          61 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA  140 (388)
T ss_dssp             CSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred             CCCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecc
Confidence            3355667899999999998876655442                            124777899999999999999999


Q ss_pred             CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCC
Q psy10063        429 AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDR  508 (894)
Q Consensus       429 ~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~  508 (894)
                      .||.|+|||+..++.+..+.+|..                         .|.+++|++++..+++++.++.|++||++..
T Consensus       141 ~dg~v~i~~~~~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~  195 (388)
T d1erja_         141 EDRLIRIWDIENRKIVMILQGHEQ-------------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG  195 (388)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSS-------------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred             cccccccccccccccccccccccc-------------------------cccccccccccccccccccceeeeeeecccc
Confidence            999999999999999999999987                         7888888899999999999999999999999


Q ss_pred             cEEEEEeCCCCeeEEEEcC-CCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc-------cCCCCCeEEEE
Q psy10063        509 QLLKTYTTERPVNSAALSP-ILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI-------KGHFGPINSLA  580 (894)
Q Consensus       509 ~~~~~~~~~~~v~~l~~sp-dg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l-------~~h~~~V~~l~  580 (894)
                      ..+....+.....++.|.+ ++.+|++++.++.              |++||+..+..+..+       .+|...|.+|+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--------------i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~  261 (388)
T d1erja_         196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRA--------------VRVWDSETGFLVERLDSENESGTGHKDSVYSVV  261 (388)
T ss_dssp             EEEEEEECSSCEEEEEECSTTCCEEEEEETTSC--------------EEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred             ccccccccccccccccccCCCCCeEEEEcCCCe--------------EEEeecccCccceeeccccccccCCCCCEEEEE
Confidence            9988888877766666665 7889999999987              777777777665544       46889999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCce
Q psy10063        581 FHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGV  660 (894)
Q Consensus       581 ~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i  660 (894)
                      |++++++|++|+.||.|++||+.........                         ..                      
T Consensus       262 ~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------------------------~~----------------------  294 (388)
T d1erja_         262 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDS-------------------------KT----------------------  294 (388)
T ss_dssp             ECTTSSEEEEEETTSEEEEEEC----------------------------------------------------------
T ss_pred             ECCCCCEEEEEECCCcEEEEeccCCcccccc-------------------------cc----------------------
Confidence            9999999999999999999998754321000                         00                      


Q ss_pred             EEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeecc
Q psy10063        661 ELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGH  740 (894)
Q Consensus       661 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~  740 (894)
                                                                                                      
T Consensus       295 --------------------------------------------------------------------------------  294 (388)
T d1erja_         295 --------------------------------------------------------------------------------  294 (388)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc---CCCce------EeecCC
Q psy10063        741 IEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL---SCPDF------LFDFDT  811 (894)
Q Consensus       741 ~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~---~~~~~------~fS~dg  811 (894)
                            ...+........|...|.+++|+|++++|++|+.||.|++||+++++++..+..   .+..+      .|+|++
T Consensus       295 ------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~  368 (388)
T d1erja_         295 ------PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY  368 (388)
T ss_dssp             ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred             ------ccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCC
Confidence                  000000112345777899999999999999999999999999999988665543   22222      378899


Q ss_pred             CeEEEEecCCCCceeEEEeecC
Q psy10063        812 TREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       812 ~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      .+|++++.|+    .|+||+++
T Consensus       369 ~~l~s~s~Dg----~I~iW~~~  386 (388)
T d1erja_         369 NVFATGSGDC----KARIWKYK  386 (388)
T ss_dssp             EEEEEEETTS----EEEEEEEE
T ss_pred             CEEEEEeCCC----EEEEEeee
Confidence            9999999887    69999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.1e-28  Score=262.72  Aligned_cols=245  Identities=13%  Similarity=0.165  Sum_probs=207.1

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|.+|+|+|++++||+|+.||.|+|||+++++++..+.. ...|.+++|++++.+++.+..++.              +.
T Consensus        19 ~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~--------------~~   84 (317)
T d1vyhc1          19 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMT--------------IK   84 (317)
T ss_dssp             CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSC--------------CC
T ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccc--------------cc
Confidence            789999999999999999999999999999999999985 688999999999999999998886              67


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEE
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSL  636 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~  636 (894)
                      +|+....+....+.+|...+.++.|++++.+|++++.|+.+++|+++.++.+                            
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----------------------------  136 (317)
T d1vyhc1          85 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV----------------------------  136 (317)
T ss_dssp             EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE----------------------------
T ss_pred             cccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceee----------------------------
Confidence            7888888888888999999999999999999999999999999998654211                            


Q ss_pred             ecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCC
Q psy10063        637 SSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSG  716 (894)
Q Consensus       637 ~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g  716 (894)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (317)
T d1vyhc1         137 --------------------------------------------------------------------------------  136 (317)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee
Q psy10063        717 TRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA  796 (894)
Q Consensus       717 ~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~  796 (894)
                                                           ..+.+|...+.+++|++++.+|++++.|+.|++|++...+.+.
T Consensus       137 -------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~  179 (317)
T d1vyhc1         137 -------------------------------------KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA  179 (317)
T ss_dssp             -------------------------------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred             -------------------------------------eEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeE
Confidence                                                 0123355667888999999999999999999999988877654


Q ss_pred             cccc---CCCceEe--------------------ecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEE
Q psy10063        797 GFLL---SCPDFLF--------------------DFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAF  853 (894)
Q Consensus       797 ~~~~---~~~~~~f--------------------S~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~f  853 (894)
                      .+..   .+..+.|                    ..++..+++++.++    .|++||+..++++..+.+|...|.+++|
T Consensus       180 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~i~~~~~~~~~~~~~~~~~~~~v~~~~~  255 (317)
T d1vyhc1         180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK----TIKMWDVSTGMCLMTLVGHDNWVRGVLF  255 (317)
T ss_dssp             EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS----EEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred             EEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCC----EEEEEECCCCcEEEEEeCCCCCEEEEEE
Confidence            3322   1122223                    33456677777776    6999999999999999999999999999


Q ss_pred             eeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        854 HPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       854 Spdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      +|++++|++|+.||.|+|||++.++++..+..
T Consensus       256 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  287 (317)
T d1vyhc1         256 HSGGKFILSCADDKTLRVWDYKNKRCMKTLNA  287 (317)
T ss_dssp             CSSSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred             CCCCCEEEEEECCCeEEEEECCCCcEEEEEcC
Confidence            99999999999999999999999988877753

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=2.1e-28  Score=271.00  Aligned_cols=242  Identities=15%  Similarity=0.129  Sum_probs=196.2

Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCc--EEEEEe-CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQ--LLKTYT-TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~--~~~~~~-~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                      ++|.|++|+|||++||+|+.||.|+|||+..++  ++..++ |.+.|.+|+|+|++++|++++.|+.             
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~-------------   74 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRN-------------   74 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSC-------------
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCe-------------
Confidence            379999999999999999999999999998776  455565 5689999999999999999999987             


Q ss_pred             eEEEEeccccce--EEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        554 DARFYHLIFEEE--FARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       554 ~v~vwd~~~~~~--~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                       |++||+..+..  ...+.+|...|.+++|+|++++|++|+.|+.|++|+++......                      
T Consensus        75 -i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~----------------------  131 (371)
T d1k8kc_          75 -AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW----------------------  131 (371)
T ss_dssp             -EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE----------------------
T ss_pred             -EEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccc----------------------
Confidence             78888876653  44567899999999999999999999999999999875432100                      


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                         ..                                                                           
T Consensus       132 ---~~---------------------------------------------------------------------------  133 (371)
T d1k8kc_         132 ---VC---------------------------------------------------------------------------  133 (371)
T ss_dssp             ---EE---------------------------------------------------------------------------
T ss_pred             ---cc---------------------------------------------------------------------------
Confidence               00                                                                           


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                               ......|...|.+++|+|++++||+|+.|+.|++|+...
T Consensus       134 -----------------------------------------~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~  172 (371)
T d1k8kc_         134 -----------------------------------------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYI  172 (371)
T ss_dssp             -----------------------------------------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCC
T ss_pred             -----------------------------------------cccccccccccccccccccccceeccccCcEEEEEeecc
Confidence                                                     001234677899999999999999999999999999754


Q ss_pred             Cce------------------ee---ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeE
Q psy10063        792 NKA------------------TA---GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS  850 (894)
Q Consensus       792 ~~~------------------~~---~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~  850 (894)
                      ...                  +.   .+...+..++|+++|+++++++.|+    .|++||+..++++..+.+|..+|.+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~v~s  248 (371)
T d1k8kc_         173 KEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS----TVCLADADKKMAVATLASETLPLLA  248 (371)
T ss_dssp             TTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT----EEEEEEGGGTTEEEEEECSSCCEEE
T ss_pred             CccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCC----cceEEeeecccceeeeeccccccee
Confidence            321                  11   1112234678999999999998887    6999999999999999999999999


Q ss_pred             EEEeeCCcEEEEecCCCcEEEEecCccc
Q psy10063        851 LAFHPDGKSYASGGEDGFVRLHTFDQAY  878 (894)
Q Consensus       851 l~fSpdg~~LaS~s~Dg~V~vWdl~~~~  878 (894)
                      |+|++|+++|++|+ |+.+++|.++...
T Consensus       249 ~~fs~d~~~la~g~-d~~~~~~~~~~~~  275 (371)
T d1k8kc_         249 VTFITESSLVAAGH-DCFPVLFTYDSAA  275 (371)
T ss_dssp             EEEEETTEEEEEET-TSSCEEEEEETTT
T ss_pred             eeecCCCCEEEEEc-CCceEEEEeeCCC
Confidence            99999999888765 7777787765543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=3.5e-28  Score=258.07  Aligned_cols=180  Identities=17%  Similarity=0.192  Sum_probs=148.8

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--  476 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--  476 (894)
                      ..+...|+||.+.|.+|+|+|    |++|+.||.|++||+.+++     .+|.. .|.+++|++++ .|++++.|+.+  
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~-~V~~~~~~~~~-~~~s~s~D~~v~~   71 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSN-LIVSLDNSKAQ-EYSSISWDDTLKV   71 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCS-CEEEEECCSTT-CCEEEETTTEEEE
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCC-CEEEEEecCCC-eEEEEeecccccc
Confidence            355668999999999999987    9999999999999987543     57887 99999999765 57888888866  


Q ss_pred             ---------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        477 ---------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       477 ---------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                               ..+.++++.+++.+++++ .++.+.+|+...++.+..+.....+  .++++++..+++++.++..      
T Consensus        72 w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~------  142 (287)
T d1pgua2          72 NGITKHEFGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLNSPG--SAVSLSQNYVAVGLEEGNT------  142 (287)
T ss_dssp             TTEEEEECSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEECSSCE--EEEEECSSEEEEEETTTSC------
T ss_pred             ccccccccccceeeeeeccCCceEEEe-ecccceeeeccceeeeeecccccee--eeeeccCcceeeeccccce------
Confidence                     357788888888776665 5667999999999999988876655  4567778899999988753      


Q ss_pred             CccceeeEEEEeccccceEEEcc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                             +++|++...+....+. .|.+.|.+|+|+|++.+|++|+.||.|++||+..+
T Consensus       143 -------v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~  194 (287)
T d1pgua2         143 -------IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR  194 (287)
T ss_dssp             -------EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             -------eeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccc
Confidence                   8899987766665554 47789999999999999999999999999998654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-27  Score=250.91  Aligned_cols=271  Identities=17%  Similarity=0.156  Sum_probs=211.5

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEE
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQ  483 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~  483 (894)
                      .+.+|...|.|++|  ||++||+|+.||.|+|||+.++++++.|.+|.+                         .|.+|+
T Consensus        10 ~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~-------------------------~V~~v~   62 (293)
T d1p22a2          10 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG-------------------------SVLCLQ   62 (293)
T ss_dssp             CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSS-------------------------CEEEEE
T ss_pred             ccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-------------------------CEeeee
Confidence            35578899998765  799999999999999999999999999999998                         677776


Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      |  ++++|++|+.|+.|++|++..+............ ...+......++++..++.              +++|++...
T Consensus        63 ~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~  125 (293)
T d1p22a2          63 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNGMMVTCSKDRS--------------IAVWDMASP  125 (293)
T ss_dssp             C--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC-EEEEECCTTEEEEEETTSC--------------EEEEECSSS
T ss_pred             c--ccceeecccccccccccccccccccccccccccc-cccccccccceeecccccc--------------eeEeecccc
Confidence            6  5789999999999999999999888777654433 3345556678888888887              677776654


Q ss_pred             c---eEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        564 E---EFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       564 ~---~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      .   ....+..|...|.++.+.  ..++++++.|+.|++||++.++.+.                               
T Consensus       126 ~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~-------------------------------  172 (293)
T d1p22a2         126 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVR-------------------------------  172 (293)
T ss_dssp             SCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEE-------------------------------
T ss_pred             ccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEE-------------------------------
Confidence            4   344556788888888775  4578899999999999986543110                               


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (293)
T d1p22a2         173 --------------------------------------------------------------------------------  172 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL  800 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~  800 (894)
                                                        .+.++...+..+.+  ++.+|++++.|+.|++||++..+.+..+..
T Consensus       173 ----------------------------------~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  216 (293)
T d1p22a2         173 ----------------------------------TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG  216 (293)
T ss_dssp             ----------------------------------EEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             ----------------------------------EEcccccccccccC--CCCeEEEecCCCEEEEEecccceeeeeecc
Confidence                                              01112223334444  356899999999999999998888766554


Q ss_pred             CCC-ceEeecCCCeEEEEecCCCCceeEEEeecCCc---------ceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEE
Q psy10063        801 SCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLIFE---------EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVR  870 (894)
Q Consensus       801 ~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg---------~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~  870 (894)
                      ... ...+++++.++++++.++    .|+|||+..+         .++..+.+|.+.|.+|+|  |+.+||+||.||.|+
T Consensus       217 ~~~~v~~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~  290 (293)
T d1p22a2         217 HEELVRCIRFDNKRIVSGAYDG----KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL  290 (293)
T ss_dssp             CSSCEEEEECCSSEEEEEETTS----CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEE
T ss_pred             cceeeeeccccceEEEEEcCCC----EEEEEECCCCccccccCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCEEE
Confidence            333 345888999999998887    5999997543         456778999999999998  578999999999999


Q ss_pred             EEe
Q psy10063        871 LHT  873 (894)
Q Consensus       871 vWd  873 (894)
                      |||
T Consensus       291 iWD  293 (293)
T d1p22a2         291 IWD  293 (293)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.96  E-value=1.9e-28  Score=267.82  Aligned_cols=190  Identities=12%  Similarity=0.056  Sum_probs=152.7

Q ss_pred             eeecc-CccEEEecCCCeEEE--------EEecCCCCEEEEEEccCCCEEEEecCCC--cEEEEecCCCeEEEEecCCCC
Q psy10063        384 NSMSP-AARKLATNAEPVVKM--------QVTDQSAKITSLLWGNLDQYIITGHAKG--DICTWDLRMGRELESISGHAK  452 (894)
Q Consensus       384 ~~~s~-dg~~l~~~~~~~~~~--------~l~~H~~~V~~l~~spdg~~L~sgs~Dg--~I~iWd~~tg~~~~~l~~h~~  452 (894)
                      ..||| ||++++....+.+.+        ...+|...|.+++|+|||++|++++.+.  .|+|||++.++. +.+..|..
T Consensus         8 ~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~~   86 (360)
T d1k32a3           8 EDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLG   86 (360)
T ss_dssp             EEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EECCCCCC
T ss_pred             ccccCCCCCEEEEEECCeEEEEECCCCcEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEeeCCCc
Confidence            46888 898888766554332        2237999999999999999998776553  799999997765 45667776


Q ss_pred             CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCE
Q psy10063        453 EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPH  531 (894)
Q Consensus       453 ~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~  531 (894)
                                               .|.+++|+|||++|++++.++.+++|++..+++...+.. ...+.+++|+|+|++
T Consensus        87 -------------------------~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~  141 (360)
T d1k32a3          87 -------------------------NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF  141 (360)
T ss_dssp             -------------------------SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred             -------------------------eEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceee
Confidence                                     788899999999999999999999999999999888875 577899999999999


Q ss_pred             EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        532 VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       532 l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |+++..+....+    .......+++|++..++... +..|...+.+++|+|||++|++++.|+.+++|+...
T Consensus       142 la~~~~~~~~~~----~~~~~~~~~v~d~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~  209 (360)
T d1k32a3         142 IAYGFPLKHGET----DGYVMQAIHVYDMEGRKIFA-ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV  209 (360)
T ss_dssp             EEEEEEECSSTT----CSCCEEEEEEEETTTTEEEE-CSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred             eeeeccccccce----eeccccceeeeccccCceee-ecccccccccccccCCCCEEEEEeCCCceEcccccc
Confidence            998775554221    12233458999999876654 446777889999999999999999999999998754

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=6.3e-27  Score=249.70  Aligned_cols=246  Identities=11%  Similarity=0.033  Sum_probs=194.0

Q ss_pred             CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCC
Q psy10063        441 GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT--TER  518 (894)
Q Consensus       441 g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~  518 (894)
                      |+.++.+.||.+                         .|.+|+|+|+|++|++|+.||.|+|||++++++++.+.  |..
T Consensus         2 g~~~~~~~GH~~-------------------------~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~   56 (299)
T d1nr0a2           2 GSIDQVRYGHNK-------------------------AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT   56 (299)
T ss_dssp             TEEEEEECCCSS-------------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSS
T ss_pred             CccceEcCCCCC-------------------------CcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCC
Confidence            678899999998                         78899999999999999999999999999999998875  457


Q ss_pred             CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce---EEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        519 PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE---FARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       519 ~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~---~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      .|.+++|+|+|++ ++++.++.              +++|++.....   ......|...+.+++|+++++++++++ ++
T Consensus        57 ~v~~v~~~~~g~~-~~~~~d~~--------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~  120 (299)
T d1nr0a2          57 MITGIKTTSKGDL-FTVSWDDH--------------LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YK  120 (299)
T ss_dssp             CEEEEEECTTSCE-EEEETTTE--------------EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SS
T ss_pred             cEEEEEeecccee-ecccceee--------------EEEeccCCccccccccccccccccccccccccccccccccc-cc
Confidence            8999999999975 45566775              67777653321   112235677899999999999777665 56


Q ss_pred             cEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcc
Q psy10063        596 FLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRM  675 (894)
Q Consensus       596 ~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~  675 (894)
                      .+++|+.....                            ..                                       
T Consensus       121 ~i~~~~~~~~~----------------------------~~---------------------------------------  133 (299)
T d1nr0a2         121 HIAIYSHGKLT----------------------------EV---------------------------------------  133 (299)
T ss_dssp             EEEEEETTEEE----------------------------EE---------------------------------------
T ss_pred             ccccccccccc----------------------------cc---------------------------------------
Confidence            78888742100                            00                                       


Q ss_pred             cccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcce
Q psy10063        676 SINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPI  755 (894)
Q Consensus       676 ~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~  755 (894)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (299)
T d1nr0a2         134 --------------------------------------------------------------------------------  133 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceee----ccccCCCceEeecCCCeEEEEecCCCCceeEEEee
Q psy10063        756 LAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATA----GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYH  831 (894)
Q Consensus       756 ~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~----~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd  831 (894)
                      .  ....+.+++|+|++++|++|+.|+.|++||+...+...    .+...+..++|+++++++++++.++    .|++||
T Consensus       134 ~--~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~~~~  207 (299)
T d1nr0a2         134 P--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSR----KVIPYS  207 (299)
T ss_dssp             E--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTS----CEEEEE
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccc
Confidence            0  01124578899999999999999999999998766432    2334456788999999999998887    599999


Q ss_pred             cCCccee---eeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccc
Q psy10063        832 LIFEEEF---ARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFD  880 (894)
Q Consensus       832 ~~tg~~l---~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~  880 (894)
                      +..++.+   ..+.+|...|.+|+|+|++++|++|+.||.|+||+++.+...
T Consensus       208 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~  259 (299)
T d1nr0a2         208 VANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDH  259 (299)
T ss_dssp             GGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSC
T ss_pred             ccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcc
Confidence            9887655   456689999999999999999999999999999999876543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=9.4e-27  Score=259.67  Aligned_cols=294  Identities=13%  Similarity=0.096  Sum_probs=198.6

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE------EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCcc
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE------LESISGHAKEPINDMQFSKDATMFITASHSQAVE  477 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~------~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~  477 (894)
                      ..++|.+.|.+|++++  ++|++|+.|+.|+|||....+.      ......|.. .+..+.+                 
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------------   68 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS-GLHHVDV-----------------   68 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT-CEEEEEE-----------------
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccC-CceEeee-----------------
Confidence            4579999999999864  6999999999999999875532      222223333 2222221                 


Q ss_pred             ceEEEEEec-CCCEEEEEECCCCEEEEEcCCCcEE---E--EEe------CCCCeeEEEEcCC-----CCEEEEEECCCC
Q psy10063        478 PINDMQFSK-DATMFITASKDHTAKLFTTHDRQLL---K--TYT------TERPVNSAALSPI-----LPHVVLGGGQEA  540 (894)
Q Consensus       478 ~V~~l~~sp-dg~~L~sgs~Dg~V~iwdl~~~~~~---~--~~~------~~~~v~~l~~spd-----g~~l~~~~~~~~  540 (894)
                       +..+.+.. ++.+|++++.||.|++|++......   .  ...      +...+..++|.++     +.+|++++.++.
T Consensus        69 -~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~  147 (393)
T d1sq9a_          69 -LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT  147 (393)
T ss_dssp             -EEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSC
T ss_pred             -EeeeccCCCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCc
Confidence             11222221 3456889999999999997643321   1  111      1345778888776     467889999998


Q ss_pred             eEEEeccCccceee------EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCce
Q psy10063        541 REVTTTSTKVGKFD------ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFT  614 (894)
Q Consensus       541 ~~v~~~~~~~~~~~------v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v  614 (894)
                      +.+|.+........      .....+  .........+...+.+++|+|++ +|++|+.||.|+|||++.++.+.     
T Consensus       148 i~vw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~-----  219 (393)
T d1sq9a_         148 TYIWKFHPFADESNSLTLNWSPTLEL--QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY-----  219 (393)
T ss_dssp             EEEEEEESSSSHHHHTTTCCCCEEEE--EEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE-----
T ss_pred             EEEEEeecCCcccceeeeeeccceec--ccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccc-----
Confidence            66555432111000      000000  01122233466679999999997 89999999999999997653210     


Q ss_pred             eeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcce
Q psy10063        615 SSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQS  694 (894)
Q Consensus       615 ~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  694 (894)
                                          .+.                                                         
T Consensus       220 --------------------~~~---------------------------------------------------------  222 (393)
T d1sq9a_         220 --------------------NFE---------------------------------------------------------  222 (393)
T ss_dssp             --------------------EEE---------------------------------------------------------
T ss_pred             --------------------ccc---------------------------------------------------------
Confidence                                000                                                         


Q ss_pred             eEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCE
Q psy10063        695 VELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREK  774 (894)
Q Consensus       695 ~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~  774 (894)
                                                                               ....+.+|...|.+|+|+|||++
T Consensus       223 ---------------------------------------------------------~~~~l~~h~~~V~~l~~spdg~~  245 (393)
T d1sq9a_         223 ---------------------------------------------------------SQHSMINNSNSIRSVKFSPQGSL  245 (393)
T ss_dssp             ---------------------------------------------------------CCC---CCCCCEEEEEECSSTTE
T ss_pred             ---------------------------------------------------------cccccccccceEEEcccccccce
Confidence                                                                     00124568889999999999999


Q ss_pred             EEEecCCCc---EEEEEccCCceeec----------------cccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCc
Q psy10063        775 LALALADKV---SERYRDRKNKATAG----------------FLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFE  835 (894)
Q Consensus       775 Latgs~Dg~---I~iwd~~~~~~~~~----------------~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg  835 (894)
                      |++|+.|+.   |+|||+..++.+..                |...+.+++|+||+++|++++.|+    .|+|||+++|
T Consensus       246 l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~----~v~vWd~~~g  321 (393)
T d1sq9a_         246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG----KLRFWDVKTK  321 (393)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTT
T ss_pred             eeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCC----EEEEEECCCC
Confidence            999999874   99999988776543                233455788999999999999998    6999999999


Q ss_pred             ceeeeccCCCCCee----EEEEeeCCcEEEEec
Q psy10063        836 EEFARIKGHFGPIN----SLAFHPDGKSYASGG  864 (894)
Q Consensus       836 ~~l~~l~gH~~~V~----~l~fSpdg~~LaS~s  864 (894)
                      +++..|++|.+.|.    .++|++++..+++++
T Consensus       322 ~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         322 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             CEEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence            99999999987765    366777766555443

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.6e-26  Score=248.44  Aligned_cols=290  Identities=6%  Similarity=-0.083  Sum_probs=211.4

Q ss_pred             EEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEE---EEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        402 KMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGREL---ESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       402 ~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~---~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ...+++|.+.|.+|+|+|++++||+|+.||.|+|||+..++..   ....+|..                         .
T Consensus         4 v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~-------------------------~   58 (342)
T d1yfqa_           4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-------------------------P   58 (342)
T ss_dssp             EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS-------------------------C
T ss_pred             EEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCC-------------------------C
Confidence            3467899999999999999999999999999999999765432   23335766                         6


Q ss_pred             eEEEEEecC-CCEEEEEECCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        479 INDMQFSKD-ATMFITASKDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       479 V~~l~~spd-g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      |.+++|+++ +.+|++|+.||.|++|++..+.....+..  ........+.+++..+++++.++.              +
T Consensus        59 V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~  124 (342)
T d1yfqa_          59 LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL--------------I  124 (342)
T ss_dssp             EEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSE--------------E
T ss_pred             EEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccc--------------c
Confidence            788888875 55899999999999999998887776654  244556677788889999999887              7


Q ss_pred             EEEeccccceE----EEccCC--CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEec
Q psy10063        556 RFYHLIFEEEF----ARIKGH--FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQ  629 (894)
Q Consensus       556 ~vwd~~~~~~~----~~l~~h--~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~  629 (894)
                      ++||++.+...    ..+..+  ......+.+.+++..+++++.||.|++|++.........                  
T Consensus       125 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~------------------  186 (342)
T d1yfqa_         125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT------------------  186 (342)
T ss_dssp             EEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCE------------------
T ss_pred             ceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCccccee------------------
Confidence            78887654332    222222  234556677888999999999999999998754321000                  


Q ss_pred             CCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeee
Q psy10063        630 GGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNR  709 (894)
Q Consensus       630 ~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~  709 (894)
                           ..                                                                         
T Consensus       187 -----~~-------------------------------------------------------------------------  188 (342)
T d1yfqa_         187 -----IE-------------------------------------------------------------------------  188 (342)
T ss_dssp             -----EE-------------------------------------------------------------------------
T ss_pred             -----ee-------------------------------------------------------------------------
Confidence                 00                                                                         


Q ss_pred             EEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEE-EeeCCCCCEEEEecCCCcEEEEE
Q psy10063        710 MSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFK-MPEPPKREKLALALADKVSERYR  788 (894)
Q Consensus       710 ~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~-la~spdg~~Latgs~Dg~I~iwd  788 (894)
                                                                    ...+...+.+ ..+..++..+++++.||.+.+|+
T Consensus       189 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~  222 (342)
T d1yfqa_         189 ----------------------------------------------ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEF  222 (342)
T ss_dssp             ----------------------------------------------ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred             ----------------------------------------------ecccccceeeeEeecCCCCEEEeecCCCeEEEEE
Confidence                                                          0000111122 22344577888999999999998


Q ss_pred             ccCCceee------------------ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeE
Q psy10063        789 DRKNKATA------------------GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINS  850 (894)
Q Consensus       789 ~~~~~~~~------------------~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~  850 (894)
                      ........                  .+...+..++|+|++.+|++++.|+    .|+|||+++++++..+..| ..+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg----~v~vWD~~~~~~l~~~~~~-~~~~~  297 (342)
T d1yfqa_         223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG----IISCWNLQTRKKIKNFAKF-NEDSV  297 (342)
T ss_dssp             CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS----CEEEEETTTTEEEEECCCC-SSSEE
T ss_pred             ecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCC----EEEEEECCCCcEEEEecCC-CCCEE
Confidence            65433211                  1112234678999999999999998    5999999999999888644 34557


Q ss_pred             EEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        851 LAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       851 l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      ++|+++|++|++++.|+.+++|.....
T Consensus       298 ~~~s~~~~~l~~a~sdd~~~~~~~~~~  324 (342)
T d1yfqa_         298 VKIACSDNILCLATSDDTFKTNAAIDQ  324 (342)
T ss_dssp             EEEEECSSEEEEEEECTHHHHCSSSCT
T ss_pred             EEEEeCCCEEEEEEcCCcEEEeeeeCC
Confidence            889999999999999999999986543

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=1.7e-25  Score=241.55  Aligned_cols=214  Identities=16%  Similarity=0.250  Sum_probs=173.8

Q ss_pred             CCCccceeeeeccCccEEEecCCC-eEEE----------EEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCC---
Q psy10063        376 SPLSVDRLNSMSPAARKLATNAEP-VVKM----------QVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMG---  441 (894)
Q Consensus       376 ~~~~~~~~~~~s~dg~~l~~~~~~-~~~~----------~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg---  441 (894)
                      .+......++|++||++|+.++.+ .+++          .+.+|.+.|.+++|+|++++|++|+.|+.|++|+....   
T Consensus        53 GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  132 (340)
T d1tbga_          53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN  132 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSC
T ss_pred             CCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccc
Confidence            344556677899999999887643 3333          67789999999999999999999999999999997654   


Q ss_pred             -eEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc------------------cceEEEEEecCCCEEEEEECCCCEEE
Q psy10063        442 -RELESISGHAKEPINDMQFSKDATMFITASHSQAV------------------EPINDMQFSKDATMFITASKDHTAKL  502 (894)
Q Consensus       442 -~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i------------------~~V~~l~~spdg~~L~sgs~Dg~V~i  502 (894)
                       +....+.+|.. .+....+. .+..++....+...                  ..+..+.+.+.+.++++|+.|+.|++
T Consensus       133 ~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i  210 (340)
T d1tbga_         133 VRVSRELAGHTG-YLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL  210 (340)
T ss_dssp             CCEEEEECCCSS-CEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred             cccceecccccc-cccccccc-cccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEE
Confidence             44666777775 44444443 34444444444332                  47888899999999999999999999


Q ss_pred             EEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc--cCCCCCeEEE
Q psy10063        503 FTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPINSL  579 (894)
Q Consensus       503 wdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V~~l  579 (894)
                      ||++.++++..+.. ...|.+++|+|++++|++++.++.              |++||+...+.+..+  ..|...|.++
T Consensus       211 ~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~--------------i~~~~~~~~~~~~~~~~~~~~~~i~~~  276 (340)
T d1tbga_         211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT--------------CRLFDLRADQELMTYSHDNIICGITSV  276 (340)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--------------EEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred             EECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCe--------------EEEEeecccccccccccccccCceEEE
Confidence            99999999998885 688999999999999999999997              888998888777655  4566789999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        580 AFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       580 ~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +|++++++|++|+.||.|+|||+..+
T Consensus       277 ~~s~~~~~l~~g~~dg~i~iwd~~~~  302 (340)
T d1tbga_         277 SFSKSGRLLLAGYDDFNCNVWDALKA  302 (340)
T ss_dssp             EECSSSCEEEEEETTSCEEEEETTTC
T ss_pred             EECCCCCEEEEEECCCEEEEEECCCC
Confidence            99999999999999999999998654

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.4e-25  Score=243.45  Aligned_cols=183  Identities=18%  Similarity=0.251  Sum_probs=141.1

Q ss_pred             eeeccCccEEEecCCCeE--------------EEEEecCC-CCEEEEEEcc--CCCEEEEecCCCcEEEEecCCCeEEEE
Q psy10063        384 NSMSPAARKLATNAEPVV--------------KMQVTDQS-AKITSLLWGN--LDQYIITGHAKGDICTWDLRMGRELES  446 (894)
Q Consensus       384 ~~~s~dg~~l~~~~~~~~--------------~~~l~~H~-~~V~~l~~sp--dg~~L~sgs~Dg~I~iWd~~tg~~~~~  446 (894)
                      ++|+++|..|+.+.....              ...+.+|. ..|.+++|+|  +|++|++|+.||.|+|||+..++....
T Consensus        23 l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~  102 (325)
T d1pgua1          23 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS  102 (325)
T ss_dssp             CEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred             EEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceee
Confidence            456666766665543321              22556774 6799999998  678999999999999999876543322


Q ss_pred             --------ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC
Q psy10063        447 --------ISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT  516 (894)
Q Consensus       447 --------l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~  516 (894)
                              +..|.+                         .|.+|+|+++|++|++++.  ++.+++|++..++++..+..
T Consensus       103 ~~~~~~~~~~~~~~-------------------------~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (325)
T d1pgua1         103 VEVNVKSEFQVLAG-------------------------PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSG  157 (325)
T ss_dssp             EEEEEEEEEECCSS-------------------------CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCS
T ss_pred             eecccccccccccC-------------------------cEEEEEECCCCCccceeeccccceEEEEeecccccceeeee
Confidence                    233433                         6888888888888887764  67899999999999988874


Q ss_pred             -CCCeeEEEEcCCCCE-EEEEECCCCeEEEeccCccceeeEEEEeccccceEEEc---cCCCCCeEEEEEecC-CCEEEE
Q psy10063        517 -ERPVNSAALSPILPH-VVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARI---KGHFGPINSLAFHPD-GKSYAS  590 (894)
Q Consensus       517 -~~~v~~l~~spdg~~-l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l---~~h~~~V~~l~~spd-g~~l~s  590 (894)
                       ...|.+++|++++.+ +++++.++.              +++||+..++....+   .+|...|.+++|+|+ +.+|++
T Consensus       158 h~~~v~~~~~~~~~~~~~~~~~~d~~--------------v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s  223 (325)
T d1pgua1         158 HSQRINACHLKQSRPMRSMTVGDDGS--------------VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT  223 (325)
T ss_dssp             CSSCEEEEEECSSSSCEEEEEETTTE--------------EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred             cccccccccccccccceEEEeecccc--------------cccccccccccceecccccCCCCccEEeeeccccceeccc
Confidence             688999999999886 556777776              788888877765554   457788999999997 688999


Q ss_pred             EeCCCcEEEEECCCC
Q psy10063        591 GGEDGFLISNTLSNG  605 (894)
Q Consensus       591 gs~Dg~I~vwdl~~~  605 (894)
                      ++.||.|++||++.+
T Consensus       224 ~~~d~~i~iwd~~~~  238 (325)
T d1pgua1         224 VGSDRKISCFDGKSG  238 (325)
T ss_dssp             EETTCCEEEEETTTC
T ss_pred             cccccceeeeeeccc
Confidence            999999999998654

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.1e-25  Score=243.73  Aligned_cols=298  Identities=13%  Similarity=0.113  Sum_probs=194.2

Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      |.|++|  ++++||+|+.||.|+|||+.++++++.+.+ .+.|.+|+|+++ .+|++++.|+.              |++
T Consensus        16 itc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~--------------i~i   78 (355)
T d1nexb2          16 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRT--------------VRV   78 (355)
T ss_dssp             EEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCC--------------EEE
T ss_pred             EEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccc--------------ccc
Confidence            455555  578999999999999999999999999985 689999999985 58999999997              888


Q ss_pred             EeccccceEEEccCCCC--CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEE
Q psy10063        558 YHLIFEEEFARIKGHFG--PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHS  635 (894)
Q Consensus       558 wd~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~  635 (894)
                      |++...+.+.....+..  .+..+.+.+++.+|++++.|+.|++|++.....+........               ....
T Consensus        79 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~---------------~~~~  143 (355)
T d1nexb2          79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHD---------------YPLV  143 (355)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------C---------------CCEE
T ss_pred             ccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccce---------------eccc
Confidence            88888877766554433  445567788999999999999999999987653321100000               0000


Q ss_pred             EecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCC
Q psy10063        636 LSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHS  715 (894)
Q Consensus       636 ~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~  715 (894)
                      ...    .......+.........+                                                 .....+
T Consensus       144 ~~~----~~~~~~~~~~~~~~~~~v-------------------------------------------------~~~~~~  170 (355)
T d1nexb2         144 FHT----PEENPYFVGVLRGHMASV-------------------------------------------------RTVSGH  170 (355)
T ss_dssp             ESC----TTTCTTEEEEEECCSSCE-------------------------------------------------EEEEEE
T ss_pred             eec----cccccceeeeeeeccccc-------------------------------------------------cccccc
Confidence            000    000000000000000000                                                 011112


Q ss_pred             CCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCcee
Q psy10063        716 GTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKAT  795 (894)
Q Consensus       716 g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~  795 (894)
                      +..++....+.       .+.+|+...+       +......++...+.++.+++++.++++++.|+.|++|+++.+..+
T Consensus       171 ~~~~~~~~~d~-------~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~  236 (355)
T d1nexb2         171 GNIVVSGSYDN-------TLIVWDVAQM-------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM  236 (355)
T ss_dssp             TTEEEEEETTS-------CEEEEETTTT-------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEE
T ss_pred             cceeeeecccc-------eeeeeecccc-------cceeeeeccccccccccccccceeeecccccceEEeeeccccccc
Confidence            22222222111       2333432222       222345567778899999999999999999999999999998876


Q ss_pred             eccccCCC-ceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEE-EEeeCCcEEEEecCCCcEEEEe
Q psy10063        796 AGFLLSCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSL-AFHPDGKSYASGGEDGFVRLHT  873 (894)
Q Consensus       796 ~~~~~~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l-~fSpdg~~LaS~s~Dg~V~vWd  873 (894)
                      ..+..... ..+++++++++++++.++    .|++||+..+++.  +..|...+.++ .|++++++|++| .||.|+|||
T Consensus       237 ~~~~~h~~~v~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd  309 (355)
T d1nexb2         237 YTLQGHTALVGLLRLSDKFLVSAAADG----SIRGWDANDYSRK--FSYHHTNLSAITTFYVSDNILVSG-SENQFNIYN  309 (355)
T ss_dssp             EEECCCSSCCCEEEECSSEEEEECTTS----EEEEEETTTCCEE--EEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEE
T ss_pred             cccccccccccccccccceeeeeeccc----cccccccccccee--cccccCCceEEEEEcCCCCEEEEE-eCCEEEEEE
Confidence            65543221 223555678999998887    6999999877644  55666666665 567777776666 589999999


Q ss_pred             cCccccccc
Q psy10063        874 FDQAYFDYT  882 (894)
Q Consensus       874 l~~~~~~~~  882 (894)
                      ++.++++..
T Consensus       310 ~~tg~~~~~  318 (355)
T d1nexb2         310 LRSGKLVHA  318 (355)
T ss_dssp             TTTCCBCCS
T ss_pred             CCCCCEEEE
Confidence            999887754

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5e-24  Score=229.20  Aligned_cols=292  Identities=14%  Similarity=0.189  Sum_probs=205.5

Q ss_pred             EecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe
Q psy10063        436 WDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT  515 (894)
Q Consensus       436 Wd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~  515 (894)
                      |+....++.+.|++|.+                         .|.+ +++++|++||+|+.||.|+|||+.++++++.+.
T Consensus         1 W~~~~~~~~~~l~GH~~-------------------------~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~   54 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDD-------------------------HVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV   54 (342)
T ss_dssp             HHHSCCCCCEEEECSTT-------------------------SCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECC
T ss_pred             CCCCCCCcCEEECCcCC-------------------------ceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEe
Confidence            66667778889999987                         5543 355578999999999999999999999999888


Q ss_pred             C-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        516 T-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       516 ~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      . ...|.+++|+++  +|++++.|+.              +++|+............+...+....+.  ...++.+..|
T Consensus        55 ~h~~~V~~v~~~~~--~l~s~s~D~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  116 (342)
T d2ovrb2          55 GHTGGVWSSQMRDN--IIISGSTDRT--------------LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRD  116 (342)
T ss_dssp             CCSSCEEEEEEETT--EEEEEETTSC--------------EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETT
T ss_pred             CCCCCEEEEEeCCC--ccccceeccc--------------ccccccccccceecccccceeEeeeecc--cccccccccc
Confidence            5 588999999974  8999999997              7888888777777776676666666554  4678889999


Q ss_pred             CcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhc
Q psy10063        595 GFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNR  674 (894)
Q Consensus       595 g~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~  674 (894)
                      +.+.+|+...++....               +...........      .....++.++  .++.+++|+..        
T Consensus       117 ~~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~------~~~~~~~~~~--~d~~i~~~d~~--------  165 (342)
T d2ovrb2         117 ATLRVWDIETGQCLHV---------------LMGHVAAVRCVQ------YDGRRVVSGA--YDFMVKVWDPE--------  165 (342)
T ss_dssp             SEEEEEESSSCCEEEE---------------EECCSSCEEEEE------ECSSCEEEEE--TTSCEEEEEGG--------
T ss_pred             eeEEEeecccccceee---------------eecccccceeec------cccceeeeec--CCCeEEEeecc--------
Confidence            9999999977643210               000000000000      0111222222  23334433311        


Q ss_pred             ccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcc
Q psy10063        675 MSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTP  754 (894)
Q Consensus       675 ~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~  754 (894)
                                                                                         ..       ....
T Consensus       166 -------------------------------------------------------------------~~-------~~~~  171 (342)
T d2ovrb2         166 -------------------------------------------------------------------TE-------TCLH  171 (342)
T ss_dssp             -------------------------------------------------------------------GT-------EEEE
T ss_pred             -------------------------------------------------------------------cc-------eeeE
Confidence                                                                               00       0111


Q ss_pred             eecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCC-ceEeecCCCeEEEEecCCCCceeEEEeecC
Q psy10063        755 ILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCP-DFLFDFDTTREVTTTSTKVGKFDARFYHLI  833 (894)
Q Consensus       755 ~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~-~~~fS~dg~~l~~as~d~~g~~~I~vwd~~  833 (894)
                      .+.+|...+..+  ++++.+|++++.||.|++||++..+.+..+..... ..+++++++++++++.++    .|+|||+.
T Consensus       172 ~~~~~~~~~~~~--~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~----~i~iwd~~  245 (342)
T d2ovrb2         172 TLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADS----TVKIWDIK  245 (342)
T ss_dssp             EECCCSSCEEEE--EECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTS----CEEEEETT
T ss_pred             EEcCcccccccc--cCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCC----EEEEEecc
Confidence            233454444444  45788999999999999999999888765554332 345778889999999887    59999999


Q ss_pred             CcceeeeccC---CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        834 FEEEFARIKG---HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       834 tg~~l~~l~g---H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      ..+....+.+   |...+.++.|  ++.+|++|+.||.|+|||++.++++..+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~  297 (342)
T d2ovrb2         246 TGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLV  297 (342)
T ss_dssp             TCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             cccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEe
Confidence            8887777765   4455555555  57899999999999999999998877764

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=2e-24  Score=243.92  Aligned_cols=355  Identities=10%  Similarity=-0.009  Sum_probs=232.0

Q ss_pred             eeeeeccCccEEEecCC-CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeE--EEEecCCCCCCeeEE
Q psy10063        382 RLNSMSPAARKLATNAE-PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRE--LESISGHAKEPINDM  458 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~-~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~--~~~l~~h~~~~V~~v  458 (894)
                      .++..+++|+..+.... ..+...+..| ..|..++|||||++|++++.|+.|+|||+.+++.  +.++....  .... 
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~--~~~~-  109 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--EARS-  109 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--EEEE-
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCC--CCCC-
Confidence            35678899988665443 4566667666 4699999999999999999999999999988763  33333211  1111 


Q ss_pred             EEcCCCCEEEEEeCCCCccceEEEEEecCCCEE-EEEECCCCEEEEEcCCCcEEEEEeC------------CCCeeEEEE
Q psy10063        459 QFSKDATMFITASHSQAVEPINDMQFSKDATMF-ITASKDHTAKLFTTHDRQLLKTYTT------------ERPVNSAAL  525 (894)
Q Consensus       459 ~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L-~sgs~Dg~V~iwdl~~~~~~~~~~~------------~~~v~~l~~  525 (894)
                                         .+.+++|+|||++| ++++.++.|+|||..+++++..+..            ......+.+
T Consensus       110 -------------------~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  170 (432)
T d1qksa2         110 -------------------IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA  170 (432)
T ss_dssp             -------------------EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred             -------------------eEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEE
Confidence                               34455678899976 6778899999999999999887652            345677888


Q ss_pred             cCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-CCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECC
Q psy10063        526 SPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-GHFGPINSLAFHPDGKSYASGGE-DGFLISNTLS  603 (894)
Q Consensus       526 spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~  603 (894)
                      +++|.+++++..+..             .|.+||...++.+.... .+...+.+++|+|||++|++++. +..|.+|+.+
T Consensus       171 s~dg~~~~vs~~~~~-------------~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~  237 (432)
T d1qksa2         171 SHYRPEFIVNVKETG-------------KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK  237 (432)
T ss_dssp             CSSSSEEEEEETTTT-------------EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred             CCCCCEEEEEEccCC-------------eEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecc
Confidence            999988877665543             27788887766544332 35567889999999998877765 4578888887


Q ss_pred             CCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCe
Q psy10063        604 NGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTR  683 (894)
Q Consensus       604 ~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~  683 (894)
                      ..+.+...         +.+.......+......                                              
T Consensus       238 ~~~~~~~~---------~~g~~~~~~~~~~~~~~----------------------------------------------  262 (432)
T d1qksa2         238 EGKLVAIE---------DTGGQTPHPGRGANFVH----------------------------------------------  262 (432)
T ss_dssp             TTEEEEEE---------ECSSSSBCCTTCEEEEE----------------------------------------------
T ss_pred             cceEEEEe---------ccCccccccCcccceec----------------------------------------------
Confidence            65432100         00000000000000000                                              


Q ss_pred             EEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCce
Q psy10063        684 LHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIG  763 (894)
Q Consensus       684 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v  763 (894)
                                    ...+...      .....|               ...+.+|+..           ...+..|...+
T Consensus       263 --------------~~~g~~~------~~~~lg---------------~~~v~~~~~~-----------~~~~~~~~~~v  296 (432)
T d1qksa2         263 --------------PTFGPVW------ATSHMG---------------DDSVALIGTD-----------PEGHPDNAWKI  296 (432)
T ss_dssp             --------------TTTEEEE------EEEBSS---------------SSEEEEEECC-----------TTTCTTTBTSE
T ss_pred             --------------CCCCcee------cccccC---------------CceEEecccc-----------cccccccccEE
Confidence                          0000000      000000               0001112111           01123455668


Q ss_pred             EEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC
Q psy10063        764 FKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG  843 (894)
Q Consensus       764 ~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g  843 (894)
                      ....+++++..+++++.+..+++|+.........   ....++ .+|++.+++++.++    .+++|++..+..   +..
T Consensus       297 ~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~---~~~sv~-vpDg~~la~~s~d~----~~k~w~~~~~~~---l~~  365 (432)
T d1qksa2         297 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAE---ISGSVA-VFDIKAMTGDGSDP----EFKTLPIAEWAG---ITE  365 (432)
T ss_dssp             EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHH---HHTCEE-EEEGGGCCCSSSCC----CEEEECHHHHHT---CCS
T ss_pred             EEEEEcCCCCeEEEEecCCccceeecccCCCCCC---eeeEEE-EEechhhcccccCC----ceEecccccccc---cCC
Confidence            8889999999999999999999998654432111   122334 49999999999887    599999876643   345


Q ss_pred             CCCCeeEEEEeeCCcEEEEec-----CCCcEEEEecCccccccccc
Q psy10063        844 HFGPINSLAFHPDGKSYASGG-----EDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       844 H~~~V~~l~fSpdg~~LaS~s-----~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      |...|.+++|||||++|+.+.     .||.|+|||-.+.++...+.
T Consensus       366 ~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~  411 (432)
T d1qksa2         366 GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK  411 (432)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred             CCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEec
Confidence            777899999999999885543     57899999999998866654

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=7e-25  Score=247.29  Aligned_cols=338  Identities=7%  Similarity=-0.018  Sum_probs=206.6

Q ss_pred             EccCCC--EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE
Q psy10063        417 WGNLDQ--YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA  494 (894)
Q Consensus       417 ~spdg~--~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg  494 (894)
                      ++.|.+  ++++++.||.|+|||+.+++++..|..|.                          .+..|+|+|||++|+++
T Consensus        26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~--------------------------~~~~vafSPDGk~l~~~   79 (426)
T d1hzua2          26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--------------------------AVHISRMSASGRYLLVI   79 (426)
T ss_dssp             SCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS--------------------------SEEEEEECTTSCEEEEE
T ss_pred             ccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC--------------------------CeeEEEECCCCCEEEEE
Confidence            444433  56778899999999999999999999875                          47888999999999999


Q ss_pred             ECCCCEEEEEcCCCcEEEE--EeCC----CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        495 SKDHTAKLFTTHDRQLLKT--YTTE----RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       495 s~Dg~V~iwdl~~~~~~~~--~~~~----~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      +.|+.|++||+.++++...  +...    ..+.+++|+|||++|++++.....             +++||...++++..
T Consensus        80 ~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~-------------v~i~d~~~~~~~~~  146 (426)
T d1hzua2          80 GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ-------------FAIMDGETLEPKQI  146 (426)
T ss_dssp             ETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE-------------EEEEETTTCCEEEE
T ss_pred             eCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCe-------------EEEEcCCccceeEE
Confidence            9999999999998875543  3332    345667778999998877654432             89999999998888


Q ss_pred             ccCCCCCeEEEEEecCCCE-EEEEeCCCcEEEEECC-----------CCcc-----ccCCCceeeeEECcCCcEEEecCC
Q psy10063        569 IKGHFGPINSLAFHPDGKS-YASGGEDGFLISNTLS-----------NGLD-----ISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~-----------~~~~-----~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                      +.+|...+..++|.+++.. ++..+.|+...+|...           ....     +..+..+..+.++|+|+++.    
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----  222 (426)
T d1hzua2         147 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFM----  222 (426)
T ss_dssp             EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEE----
T ss_pred             eeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEE----
Confidence            8777666555555555542 3344444444444332           2211     11222333333333333221    


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                                         .+.. ....+.+++                                               
T Consensus       223 -------------------~a~~-~~~~~~~~~-----------------------------------------------  235 (426)
T d1hzua2         223 -------------------TAAN-NSNKVAVID-----------------------------------------------  235 (426)
T ss_dssp             -------------------EEET-TCSEEEEEE-----------------------------------------------
T ss_pred             -------------------eeee-cccceeeee-----------------------------------------------
Confidence                               1000 000011100                                               


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                       ...+..++......                  . ............+...+....++.++...+.+.....+++|+.+.
T Consensus       236 -~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~  295 (426)
T d1hzua2         236 -SKDRRLSALVDVGK------------------T-PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK  295 (426)
T ss_dssp             -TTTTEEEEEEECSS------------------C-CCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSE
T ss_pred             -cccccEEEEeccCC------------------c-ccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceE
Confidence             00001110000000                  0 000111112333445556666666666666666665555554443


Q ss_pred             CceeeccccCCCceEeecCCCeEEEEec---CCCCceeEEEeecCCcceeeec---------cCCCCCeeEEEEeeCCcE
Q psy10063        792 NKATAGFLLSCPDFLFDFDTTREVTTTS---TKVGKFDARFYHLIFEEEFARI---------KGHFGPINSLAFHPDGKS  859 (894)
Q Consensus       792 ~~~~~~~~~~~~~~~fS~dg~~l~~as~---d~~g~~~I~vwd~~tg~~l~~l---------~gH~~~V~~l~fSpdg~~  859 (894)
                      .+.+..+......++|+||+++|++...   ++..+..|+|||+++++++..+         ..|...|.+++|||||++
T Consensus       296 ~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~  375 (426)
T d1hzua2         296 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDE  375 (426)
T ss_dssp             EEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSE
T ss_pred             eEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCE
Confidence            3445555566778999999999996432   1111125999999998776543         356677999999999987


Q ss_pred             EE-Ee----cCCCcEEEEecCccccccccc
Q psy10063        860 YA-SG----GEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       860 La-S~----s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      |+ ++    +.||.|+|||.++.++...+.
T Consensus       376 i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~  405 (426)
T d1hzua2         376 VWFSVWNGKNDSSALVVVDDKTLKLKAVVK  405 (426)
T ss_dssp             EEEEECCCTTSCCEEEEEETTTTEEEEEEC
T ss_pred             EEEEEecCCCCCCeEEEEECCCCeEEEEEC
Confidence            64 43    478999999999988766554

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.92  E-value=1.9e-22  Score=213.87  Aligned_cols=275  Identities=15%  Similarity=0.070  Sum_probs=212.1

Q ss_pred             EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-EEECCCCEEEE
Q psy10063        425 ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI-TASKDHTAKLF  503 (894)
Q Consensus       425 ~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~-sgs~Dg~V~iw  503 (894)
                      ++++.|+.|.|||+++++.++++....                          .+..|+|+|||++|+ +++.++.|++|
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g~--------------------------~p~~va~spdG~~l~v~~~~~~~i~v~   59 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVGS--------------------------NPMGAVISPDGTKVYVANAHSNDVSII   59 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECSS--------------------------SEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECCC--------------------------CceEEEEeCCCCEEEEEECCCCEEEEE
Confidence            456788999999999999999988654                          367788888888774 56678999999


Q ss_pred             EcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEec
Q psy10063        504 TTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHP  583 (894)
Q Consensus       504 dl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~sp  583 (894)
                      |+.++++++.+..+..+..++|++++.++++.+.++..             +++|+...++.+..+..+ ..+.+++|++
T Consensus        60 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  125 (301)
T d1l0qa2          60 DTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASST-------------LSVIDTTSNTVAGTVKTG-KSPLGLALSP  125 (301)
T ss_dssp             ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE-------------EEEEETTTTEEEEEEECS-SSEEEEEECT
T ss_pred             ECCCCceeeeeeccccccccccccccccccccccccce-------------eeecccccceeeeecccc-ccceEEEeec
Confidence            99999999999988889999999999999888877653             889999999888887654 5678999999


Q ss_pred             CCCEEEE-EeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEE
Q psy10063        584 DGKSYAS-GGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVEL  662 (894)
Q Consensus       584 dg~~l~s-gs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l  662 (894)
                      +|++++. +..++.+++|+....+.+.                         .+                          
T Consensus       126 dg~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~--------------------------  154 (301)
T d1l0qa2         126 DGKKLYVTNNGDKTVSVINTVTKAVIN-------------------------TV--------------------------  154 (301)
T ss_dssp             TSSEEEEEETTTTEEEEEETTTTEEEE-------------------------EE--------------------------
T ss_pred             CCCeeeeeeccccceeeeeccccceee-------------------------ec--------------------------
Confidence            9998754 4567788999876543110                         00                          


Q ss_pred             echhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeecccc
Q psy10063        663 TKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIE  742 (894)
Q Consensus       663 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~  742 (894)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (301)
T d1l0qa2         155 --------------------------------------------------------------------------------  154 (301)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCC-CcEEEEEccCCceeeccc--cCCCceEeecCCCeEEEEec
Q psy10063        743 GTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALAD-KVSERYRDRKNKATAGFL--LSCPDFLFDFDTTREVTTTS  819 (894)
Q Consensus       743 g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~D-g~I~iwd~~~~~~~~~~~--~~~~~~~fS~dg~~l~~as~  819 (894)
                                     .+...+.++++++++.+++++..+ +.+.+|+....+....+.  .....++|++++..++++..
T Consensus       155 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~  219 (301)
T d1l0qa2         155 ---------------SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNV  219 (301)
T ss_dssp             ---------------ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEE
T ss_pred             ---------------ccCCCceEEEeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccccccccc
Confidence                           011224567788888888777665 556677766655544333  23346789999999987765


Q ss_pred             CCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEE-EEecCCCcEEEEecCccccccccccCc
Q psy10063        820 TKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY-ASGGEDGFVRLHTFDQAYFDYTFDISE  887 (894)
Q Consensus       820 d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~L-aS~s~Dg~V~vWdl~~~~~~~~~~~~~  887 (894)
                      +... ..|++||+.+++++..+..+ ..+.+|+|+|||++| ++++.|+.|+|||+++++++..+.+.+
T Consensus       220 ~~~~-~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~vg~  286 (301)
T d1l0qa2         220 DKYF-NTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGK  286 (301)
T ss_dssp             CSSC-CEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred             ccee-eeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeCCC
Confidence            5421 25999999999998887655 457899999999976 678899999999999999888876543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=9.9e-24  Score=234.90  Aligned_cols=125  Identities=15%  Similarity=0.135  Sum_probs=105.9

Q ss_pred             CCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc---------ccCCCceEeecCCCeEEEEecCCCCceeEEE
Q psy10063        759 PVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF---------LLSCPDFLFDFDTTREVTTTSTKVGKFDARF  829 (894)
Q Consensus       759 h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~---------~~~~~~~~fS~dg~~l~~as~d~~g~~~I~v  829 (894)
                      +...+.+++|+|++ +||+|+.|+.|+|||+..++.+..+         ...+..++|+|||++|++++.|+.. ..|+|
T Consensus       183 ~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~-~~i~l  260 (393)
T d1sq9a_         183 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF-GCITL  260 (393)
T ss_dssp             SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE-EEEEE
T ss_pred             CCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCc-ceeee
Confidence            44557899999997 8999999999999999887765432         2345578899999999999988642 14899


Q ss_pred             eecCCcceeeec-------------cCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcccccccccc
Q psy10063        830 YHLIFEEEFARI-------------KGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDI  885 (894)
Q Consensus       830 wd~~tg~~l~~l-------------~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~  885 (894)
                      ||++.++++..+             .+|.+.|++|+|+||+++|||||.|+.|+|||++.++++..|+-
T Consensus       261 wd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~g  329 (393)
T d1sq9a_         261 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM  329 (393)
T ss_dssp             EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             cccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECC
Confidence            999999887765             38999999999999999999999999999999999999888753

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=8.4e-24  Score=228.82  Aligned_cols=314  Identities=11%  Similarity=-0.029  Sum_probs=208.6

Q ss_pred             EEEccCCCEEEEecCCCcEEEEecCCCeEEEEecC-CCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-
Q psy10063        415 LLWGNLDQYIITGHAKGDICTWDLRMGRELESISG-HAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI-  492 (894)
Q Consensus       415 l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~-h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~-  492 (894)
                      ++|++++++|++++.|+.|.|||++++++++.++. +..                         .+.+|+|+|||++|+ 
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~-------------------------~p~~l~~spDG~~l~v   56 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF-------------------------GPGTAMMAPDNRTAYV   56 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCC-------------------------SSCEEEECTTSSEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCC-------------------------CcceEEECCCCCEEEE
Confidence            57899999999999999999999999999998874 333                         466778888888764 


Q ss_pred             EEECCCCEEEEEcCCCcEEEEEeCCC-------CeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccce
Q psy10063        493 TASKDHTAKLFTTHDRQLLKTYTTER-------PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEE  565 (894)
Q Consensus       493 sgs~Dg~V~iwdl~~~~~~~~~~~~~-------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~  565 (894)
                      +++.++.|++||+.+++.+..+....       .+..++|+|||++|+++..+.....+.....  ...+++|+...++.
T Consensus        57 ~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~  134 (346)
T d1jmxb_          57 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK--PPRLEVFSTADGLE  134 (346)
T ss_dssp             EETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC--CCEEEEEEGGGGGG
T ss_pred             EECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccC--cceEEEEeccccee
Confidence            45578999999999999998887432       3578999999999998876544333322211  22388999988877


Q ss_pred             EEEccCC--CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC---CCceeeeEECcCCcEEEecCCeEEEEeccc
Q psy10063        566 FARIKGH--FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE---GSFTSSSTQQPDGLVYPSQGGHIHSLSSHS  640 (894)
Q Consensus       566 ~~~l~~h--~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~---~~~v~~~~~spdg~~l~~~~g~i~~~~~~~  640 (894)
                      ...+..+  ...+..+.+++++++++.+   +.+.+|++..++.+..   +.....+.++|++..+              
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  197 (346)
T d1jmxb_         135 AKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF--------------  197 (346)
T ss_dssp             BCCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCC--------------
T ss_pred             eeEEEeeeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEE--------------
Confidence            6555433  2345666777777665542   4588898866542210   0000111111111000              


Q ss_pred             CCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEE
Q psy10063        641 TSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLH  720 (894)
Q Consensus       641 ~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~  720 (894)
                               +...                                                            ..+..  
T Consensus       198 ---------~~~~------------------------------------------------------------~~~~~--  206 (346)
T d1jmxb_         198 ---------WPHQ------------------------------------------------------------SPRHE--  206 (346)
T ss_dssp             ---------CCCC------------------------------------------------------------CTTCE--
T ss_pred             ---------EEEe------------------------------------------------------------cCCCc--
Confidence                     0000                                                            00000  


Q ss_pred             ecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccc-
Q psy10063        721 VNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFL-  799 (894)
Q Consensus       721 v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~-  799 (894)
                                    +.++                        .....+......++++..++.+.+|+...+....... 
T Consensus       207 --------------~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (346)
T d1jmxb_         207 --------------FSML------------------------YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA  248 (346)
T ss_dssp             --------------EEEE------------------------EEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE
T ss_pred             --------------eEee------------------------eeeeeeccCceeEeeccCCceEEEEECCCCceEEEEee
Confidence                          0000                        0111222334455666677778999988877644333 


Q ss_pred             ---cCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCc
Q psy10063        800 ---LSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQ  876 (894)
Q Consensus       800 ---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~  876 (894)
                         .....+.+++++.+++....+     .|++||+.+++++..+. +...+.+|+|+|||++|++++.|+.|+|||+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~-----~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t  322 (346)
T d1jmxb_         249 DLTELYFTGLRSPKDPNQIYGVLN-----RLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT  322 (346)
T ss_dssp             ECSSCEEEEEECSSCTTEEEEEES-----EEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred             cccceeEEEEEeCCCCEEEEecCC-----eEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECcc
Confidence               233356688898888877655     49999999999988776 345799999999999999999999999999999


Q ss_pred             cccccccccCc
Q psy10063        877 AYFDYTFDISE  887 (894)
Q Consensus       877 ~~~~~~~~~~~  887 (894)
                      .+.+..++++.
T Consensus       323 ~~~i~~i~~p~  333 (346)
T d1jmxb_         323 LEKVKNIKLPG  333 (346)
T ss_dssp             TEEEEEEECSS
T ss_pred             CCEEEEEECCC
Confidence            99998888754

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=3.9e-23  Score=232.84  Aligned_cols=346  Identities=9%  Similarity=-0.029  Sum_probs=212.0

Q ss_pred             eeeeccCccEEEecCC-CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEE--ecCCCCCCeeEEE
Q psy10063        383 LNSMSPAARKLATNAE-PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELES--ISGHAKEPINDMQ  459 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~-~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~--l~~h~~~~V~~v~  459 (894)
                      ++..+.||+..+.... ..+...+..| ..+.+|+|||||++|++++.|+.|+|||+.+++....  +....  ....  
T Consensus        35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~--~~~~--  109 (426)
T d1hzua2          35 SVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI--EARS--  109 (426)
T ss_dssp             EEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS--EEEE--
T ss_pred             EEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCC--CCcc--
Confidence            4556778877665433 4555567666 4699999999999999999999999999998875433  33211  1111  


Q ss_pred             EcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE-EECCCCEEEEEcCCCcEEEEEeCC-CC-----------eeEEEEc
Q psy10063        460 FSKDATMFITASHSQAVEPINDMQFSKDATMFIT-ASKDHTAKLFTTHDRQLLKTYTTE-RP-----------VNSAALS  526 (894)
Q Consensus       460 ~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s-gs~Dg~V~iwdl~~~~~~~~~~~~-~~-----------v~~l~~s  526 (894)
                                        .+.+++|+|||++|++ +..++.|++||...++++..+..+ ..           ...++++
T Consensus       110 ------------------~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s  171 (426)
T d1hzua2         110 ------------------VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS  171 (426)
T ss_dssp             ------------------EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred             ------------------eEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEEC
Confidence                              3456678889998755 457899999999999988877642 23           3444555


Q ss_pred             CCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceE-EEccCCCCCeEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10063        527 PILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEF-ARIKGHFGPINSLAFHPDGKSYASGGE-DGFLISNTLSN  604 (894)
Q Consensus       527 pdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~-~~l~~h~~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~  604 (894)
                      +++..++....+...             +.+++...+..+ .....+...+..++|++++++++.+.. +..+.+|++..
T Consensus       172 ~d~~~~~~~~~~~~~-------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~  238 (426)
T d1hzua2         172 HEHPEFIVNVKETGK-------------VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKD  238 (426)
T ss_dssp             SSSSEEEEEETTTTE-------------EEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTT
T ss_pred             CCCCEEEEecCCCCe-------------EEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeeccc
Confidence            555555544443321             445555444322 233467788999999999998877764 55688899877


Q ss_pred             CccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeE
Q psy10063        605 GLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRL  684 (894)
Q Consensus       605 ~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~  684 (894)
                      ++.+..                         +........            ...+.++.                    
T Consensus       239 ~~~~~~-------------------------~~~~~~~~~------------~~~~~~~~--------------------  261 (426)
T d1hzua2         239 RRLSAL-------------------------VDVGKTPHP------------GRGANFVH--------------------  261 (426)
T ss_dssp             TEEEEE-------------------------EECSSCCCC------------SCCEEEEE--------------------
T ss_pred             ccEEEE-------------------------eccCCcccc------------cceeeeec--------------------
Confidence            653210                         000000000            00000000                    


Q ss_pred             EeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceE
Q psy10063        685 HVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGF  764 (894)
Q Consensus       685 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~  764 (894)
                                     .+...  ........++.+..                 ++..........++....+.+|...+.
T Consensus       262 ---------------~~~~~--~~~~~~~~d~~v~~-----------------~~~~~~~~~~~~~~~~~~l~g~~~~v~  307 (426)
T d1hzua2         262 ---------------PKYGP--VWSTSHLGDGSISL-----------------IGTDPKNHPQYAWKKVAELQGQGGGSL  307 (426)
T ss_dssp             ---------------TTTEE--EEEEECTTTCEEEE-----------------EECCTTTCTTTBTSEEEEEECSSSCCC
T ss_pred             ---------------CCCCc--eEEeccCCCceEEE-----------------eeccccccccccceEeEEEecCCCcee
Confidence                           00000  00001111111111                 111111111223344456778999999


Q ss_pred             EEeeCCCCCEEEE-------ecCCCcEEEEEccCCceeecc---------ccC---CCceEeecCCCeEEEEe-cCCCCc
Q psy10063        765 KMPEPPKREKLAL-------ALADKVSERYRDRKNKATAGF---------LLS---CPDFLFDFDTTREVTTT-STKVGK  824 (894)
Q Consensus       765 ~la~spdg~~Lat-------gs~Dg~I~iwd~~~~~~~~~~---------~~~---~~~~~fS~dg~~l~~as-~d~~g~  824 (894)
                      .++|+||+++|++       ++.|++|+|||+.+++.+..+         ..+   +..++|||||+++++.. ..+..+
T Consensus       308 ~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~  387 (426)
T d1hzua2         308 FIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDS  387 (426)
T ss_dssp             CEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSC
T ss_pred             EEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCC
Confidence            9999999999994       566889999999887764332         122   22456999999886543 222223


Q ss_pred             eeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEE
Q psy10063        825 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA  861 (894)
Q Consensus       825 ~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~La  861 (894)
                      ..|+|||.++++++..+.++.      .++|+|+|.+
T Consensus       388 ~~i~v~D~~T~k~~~~i~~~~------~~tp~Gk~~~  418 (426)
T d1hzua2         388 SALVVVDDKTLKLKAVVKDPR------LITPTGKFNV  418 (426)
T ss_dssp             CEEEEEETTTTEEEEEECCTT------CCSEEEEEEH
T ss_pred             CeEEEEECCCCeEEEEECCCC------ccCCCceEeE
Confidence            369999999999999998885      4468888744

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=4e-23  Score=221.46  Aligned_cols=250  Identities=13%  Similarity=0.100  Sum_probs=178.7

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCc----EEEEEeCCCCeeEEEEcCCC-CEEEEEECCCCeEEEeccCccce
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQ----LLKTYTTERPVNSAALSPIL-PHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~----~~~~~~~~~~v~~l~~spdg-~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      .|.+|+|+|++++||+|+.||.|+|||++.+.    ++..+.|...|.+++|++++ .+|++++.++.            
T Consensus        13 ~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~------------   80 (342)
T d1yfqa_          13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE------------   80 (342)
T ss_dssp             CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC------------
T ss_pred             CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc------------
Confidence            79999999999999999999999999997654    34445678999999999875 47888888887            


Q ss_pred             eeEEEEeccccceEEEccCCCCC-eEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCC
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGP-INSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGG  631 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~-V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g  631 (894)
                        |++|++..+.....+..+... .....+.+++..+++++.|+.+++||++......                      
T Consensus        81 --v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~----------------------  136 (342)
T d1yfqa_          81 --ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGV----------------------  136 (342)
T ss_dssp             --EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBC----------------------
T ss_pred             --eeeeecccccccccccccccccccccccccccccccccccccccceeeccccccce----------------------
Confidence              888988888777776655443 4455666788899999999999999975432110                      


Q ss_pred             eEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEE
Q psy10063        632 HIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMS  711 (894)
Q Consensus       632 ~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  711 (894)
                       ......                                                                         
T Consensus       137 -~~~~~~-------------------------------------------------------------------------  142 (342)
T d1yfqa_         137 -IAVKNL-------------------------------------------------------------------------  142 (342)
T ss_dssp             -EEEEES-------------------------------------------------------------------------
T ss_pred             -eeeccc-------------------------------------------------------------------------
Confidence             000000                                                                         


Q ss_pred             EcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccC
Q psy10063        712 INHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRK  791 (894)
Q Consensus       712 ~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~  791 (894)
                                                           .      ..........+.+.+.+..+++++.|+.|++|++..
T Consensus       143 -------------------------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~  179 (342)
T d1yfqa_         143 -------------------------------------N------SNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL  179 (342)
T ss_dssp             -------------------------------------C------SSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSC
T ss_pred             -------------------------------------c------cccccceeeeeeeeccCCceeeecCCCcEEEEeccc
Confidence                                                 0      000001112344556778999999999999999876


Q ss_pred             Cceeeccc----cC--CCc-eEeecCCCeEEEEecCCCCceeEEEeecCCccee---------------eeccCCCCCee
Q psy10063        792 NKATAGFL----LS--CPD-FLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF---------------ARIKGHFGPIN  849 (894)
Q Consensus       792 ~~~~~~~~----~~--~~~-~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l---------------~~l~gH~~~V~  849 (894)
                      .+......    ..  ... ..+..++..+++++.++    .|.+|++......               ....+|...|.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  255 (342)
T d1yfqa_         180 CEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG----RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN  255 (342)
T ss_dssp             CTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS----EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE
T ss_pred             CcccceeeeecccccceeeeEeecCCCCEEEeecCCC----eEEEEEecCCcceeeccccceeeeeeeccCCCcccccce
Confidence            65432221    11  112 22455677888888776    5888887543211               12346778899


Q ss_pred             EEEEeeCCcEEEEecCCCcEEEEecCccccccccc
Q psy10063        850 SLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       850 ~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                      +|+|+|++++||+||.||.|+|||++.++.+..+.
T Consensus       256 ~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~  290 (342)
T d1yfqa_         256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA  290 (342)
T ss_dssp             EEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred             eEEecCCccEEEEECCCCEEEEEECCCCcEEEEec
Confidence            99999999999999999999999999988877664

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.91  E-value=4.8e-24  Score=232.35  Aligned_cols=137  Identities=9%  Similarity=-0.027  Sum_probs=118.7

Q ss_pred             EEEEcc-CCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE
Q psy10063        414 SLLWGN-LDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI  492 (894)
Q Consensus       414 ~l~~sp-dg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~  492 (894)
                      +-.||| ||++||+++ +|.|+|||+..++.++.  +|..                         .|.+++|+|||++|+
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~--~~~~-------------------------~v~~~~~spDg~~l~   58 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--PEPL-------------------------RIRYVRRGGDTKVAF   58 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC--SCCS-------------------------CEEEEEECSSSEEEE
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEEc--cCCC-------------------------CEEEEEECCCCCEEE
Confidence            457999 999999987 47999999998876653  5766                         678888888888888


Q ss_pred             EEECCC--CEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc
Q psy10063        493 TASKDH--TAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK  570 (894)
Q Consensus       493 sgs~Dg--~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~  570 (894)
                      +++.+.  .|++||++.+++.+...+...|.+++|+|+|++|++++.++.              +++|++..++....+.
T Consensus        59 ~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~  124 (360)
T d1k32a3          59 IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE--------------IMTVDLETGKPTVIER  124 (360)
T ss_dssp             EEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE--------------EEEEETTTCCEEEEEE
T ss_pred             EEEcCCCCEEEEEECCCCcEEEeeCCCceEEeeeecccccccceeccccc--------------cccccccccceeeeee
Confidence            766553  799999999988887778899999999999999999999986              8899999999999999


Q ss_pred             CCCCCeEEEEEecCCCEEEEEe
Q psy10063        571 GHFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       571 ~h~~~V~~l~~spdg~~l~sgs  592 (894)
                      .|...+.+++|+|||++|+.++
T Consensus       125 ~~~~~~~~~~~spdg~~la~~~  146 (360)
T d1k32a3         125 SREAMITDFTISDNSRFIAYGF  146 (360)
T ss_dssp             CSSSCCCCEEECTTSCEEEEEE
T ss_pred             cccccccchhhccceeeeeeec
Confidence            9999999999999999998654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=6.5e-23  Score=220.86  Aligned_cols=308  Identities=12%  Similarity=-0.011  Sum_probs=205.5

Q ss_pred             CEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEE-EEEECCCCE
Q psy10063        422 QYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMF-ITASKDHTA  500 (894)
Q Consensus       422 ~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L-~sgs~Dg~V  500 (894)
                      +||++++.|+.|+|||++++++++.+..+...                       ..+.+++|+|||++| ++++.++.|
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~-----------------------~~~~~i~~spDg~~l~v~~~~~~~v   58 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAG-----------------------PTPMVPMVAPGGRIAYATVNKSESL   58 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCT-----------------------TCCCCEEECTTSSEEEEEETTTTEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCC-----------------------CCccEEEECCCCCEEEEEECCCCeE
Confidence            58999999999999999999999998764320                       046678888888877 456678999


Q ss_pred             EEEEcCCCcEEEEEeCC------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCC
Q psy10063        501 KLFTTHDRQLLKTYTTE------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFG  574 (894)
Q Consensus       501 ~iwdl~~~~~~~~~~~~------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~  574 (894)
                      ++||+.+++++..+...      ..+..++|+|++++++++..+.....|......  ..+.+||...++.+..+..+ .
T Consensus        59 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~-~  135 (337)
T d1pbyb_          59 VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP--TRVALYDAETLSRRKAFEAP-R  135 (337)
T ss_dssp             EEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC--CEEEEEETTTTEEEEEEECC-S
T ss_pred             EEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccc--cceeeccccCCeEEEecccc-C
Confidence            99999999999888743      235689999999999998876554444333222  23889999999988887644 5


Q ss_pred             CeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccc
Q psy10063        575 PINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSR  654 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~  654 (894)
                      .+.+++|++||++|++++.  .+.+||...++...                         .+......   ....+.   
T Consensus       136 ~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~-------------------------~~~~~~~~---~~~~~~---  182 (337)
T d1pbyb_         136 QITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVE-------------------------DKPIQSWE---AETYAQ---  182 (337)
T ss_dssp             SCCCEEECTTSSCEEEESS--SEEEEETTTTEEEE-------------------------EECSTTTT---TTTBCC---
T ss_pred             CceEEEEcCCCCEEEEEcC--CcceeeeecCcEEE-------------------------EeecCCcc---ccceec---
Confidence            6889999999999999864  47789987654221                         00000000   000000   


Q ss_pred             cCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCc
Q psy10063        655 VDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASP  734 (894)
Q Consensus       655 ~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~  734 (894)
                        .....++.                                                                      
T Consensus       183 --~~~~~~~~----------------------------------------------------------------------  190 (337)
T d1pbyb_         183 --PDVLAVWN----------------------------------------------------------------------  190 (337)
T ss_dssp             --CBCCCCCC----------------------------------------------------------------------
T ss_pred             --CCcceeec----------------------------------------------------------------------
Confidence              00000000                                                                      


Q ss_pred             ceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc----CCCceEeecC
Q psy10063        735 LMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL----SCPDFLFDFD  810 (894)
Q Consensus       735 l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~----~~~~~~fS~d  810 (894)
                                    .+.     ..+...+.......+...+..+..++.+.+|+...++.......    ....+.++++
T Consensus       191 --------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (337)
T d1pbyb_         191 --------------QHE-----SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPA  251 (337)
T ss_dssp             --------------CCT-----TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTT
T ss_pred             --------------ccc-----ccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEeccc
Confidence                          000     00000000111112222233344455677777766655332222    2223457788


Q ss_pred             CCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccC
Q psy10063        811 TTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDIS  886 (894)
Q Consensus       811 g~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~  886 (894)
                      +.+++.+.  +    .|++||+++++++..+. |...+.+|+|+|||++|++++.|+.|+|||++..+.+..++++
T Consensus       252 ~~~~~~~~--~----~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~  320 (337)
T d1pbyb_         252 KTRAFGAY--N----VLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             SSEEEEEE--S----EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             ceEEEEcc--c----cEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence            88877653  2    59999999999998875 5567899999999999999999999999999999988887754

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.6e-21  Score=199.04  Aligned_cols=177  Identities=18%  Similarity=0.298  Sum_probs=115.1

Q ss_pred             eeccCccEEEecCC-----------CeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCC
Q psy10063        385 SMSPAARKLATNAE-----------PVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKE  453 (894)
Q Consensus       385 ~~s~dg~~l~~~~~-----------~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~  453 (894)
                      ++++||++|+.++.           ......|.+|.+.|.+|+|  ++++|++|+.|+.|++|++..+........+.. 
T Consensus        20 c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~-   96 (293)
T d1p22a2          20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE-   96 (293)
T ss_dssp             EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCS-
T ss_pred             EEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccccccccccccccccccccccccc-
Confidence            45556666655533           2344578899999999987  678999999999999999999988777765543 


Q ss_pred             CeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEE---EEEe-CCCCeeEEEEcCCC
Q psy10063        454 PINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLL---KTYT-TERPVNSAALSPIL  529 (894)
Q Consensus       454 ~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~---~~~~-~~~~v~~l~~spdg  529 (894)
                                                ....+......++++..++.+++||+......   ..+. +...+.++.+... 
T Consensus        97 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  149 (293)
T d1p22a2          97 --------------------------AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-  149 (293)
T ss_dssp             --------------------------CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT-
T ss_pred             --------------------------ccccccccccceeecccccceeEeeccccccccccccccccccccccceeccc-
Confidence                                      11223334455666666666666666544322   2222 3456666666643 


Q ss_pred             CEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc
Q psy10063        530 PHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       530 ~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~  608 (894)
                       .+++++.++.              |++||+..++.+..+.+|...|..+.++  +.+|++++.||.|++||++....+
T Consensus       150 -~~~~~s~d~~--------------i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~  211 (293)
T d1p22a2         150 -YIVSASGDRT--------------IKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL  211 (293)
T ss_dssp             -EEEEEETTSE--------------EEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE
T ss_pred             -ccccccCCCc--------------eeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceee
Confidence             4566666666              6666666666666666666666666664  346666666666666666666544

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=5e-22  Score=223.96  Aligned_cols=334  Identities=14%  Similarity=-0.003  Sum_probs=223.4

Q ss_pred             cceeeeeccCccEEEecCC-CeEEEE---------------EecCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCe
Q psy10063        380 VDRLNSMSPAARKLATNAE-PVVKMQ---------------VTDQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGR  442 (894)
Q Consensus       380 ~~~~~~~s~dg~~l~~~~~-~~~~~~---------------l~~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~  442 (894)
                      ..+.++|||||++|+.... +.+.+.               ..+|.+.+.+++|+|||++| ++++.++.|+|||..+++
T Consensus        63 ~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~  142 (432)
T d1qksa2          63 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE  142 (432)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred             CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcccc
Confidence            3466799999999987653 333321               12455666677788999976 678889999999999999


Q ss_pred             EEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEE-EEECCCCEEEEEcCCCcEEE--EEeCCCC
Q psy10063        443 ELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFI-TASKDHTAKLFTTHDRQLLK--TYTTERP  519 (894)
Q Consensus       443 ~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~-sgs~Dg~V~iwdl~~~~~~~--~~~~~~~  519 (894)
                      +++.+..|.. .+..+.|.++++             ...+.++++|.+++ +...++.|.+||..+++.+.  .+.....
T Consensus       143 ~~~~~~~~~~-~~~~~~~~~~~~-------------~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~  208 (432)
T d1qksa2         143 PKKIQSTRGM-TYDEQEYHPEPR-------------VAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF  208 (432)
T ss_dssp             EEEEEECCEE-CTTTCCEESCCC-------------EEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSS
T ss_pred             ceeeeccCCc-cccceeccCCCc-------------eeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCc
Confidence            9999988776 666677777774             56678899988765 45667999999999887554  4556778


Q ss_pred             eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc-----CCCCCeEEEEEecCCCEEEEEe-C
Q psy10063        520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK-----GHFGPINSLAFHPDGKSYASGG-E  593 (894)
Q Consensus       520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~-----~h~~~V~~l~~spdg~~l~sgs-~  593 (894)
                      +.+++|+|+|++|++++.++..             +.++|...++.+..+.     .|........+...+...+... .
T Consensus       209 ~~~~~~spdg~~~~va~~~~~~-------------v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg  275 (432)
T d1qksa2         209 LHDGGLDGSHRYFITAANARNK-------------LVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG  275 (432)
T ss_dssp             EEEEEECTTSCEEEEEEGGGTE-------------EEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS
T ss_pred             cccceECCCCCEEEEeccccce-------------EEEeecccceEEEEeccCccccccCcccceecCCCCceecccccC
Confidence            8999999999999999887764             7888888877766543     2444455555555555555443 4


Q ss_pred             CCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhh
Q psy10063        594 DGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARN  673 (894)
Q Consensus       594 Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~  673 (894)
                      ++.|.+|.............+....+++++..+                       +.+.  .+....+|...       
T Consensus       276 ~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~-----------------------~~~s--~p~~~~lw~~~-------  323 (432)
T d1qksa2         276 DDSVALIGTDPEGHPDNAWKILDSFPALGGGSL-----------------------FIKT--HPNSQYLYVDA-------  323 (432)
T ss_dssp             SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-----------------------CEEC--CTTCSEEEEEC-------
T ss_pred             CceEEecccccccccccccEEEEEEEcCCCCeE-----------------------EEEe--cCCccceeecc-------
Confidence            788999987655433333334444444443221                       1111  11122222100       


Q ss_pred             cccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCc
Q psy10063        674 RMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDT  753 (894)
Q Consensus       674 ~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~  753 (894)
                                                                                                      
T Consensus       324 --------------------------------------------------------------------------------  323 (432)
T d1qksa2         324 --------------------------------------------------------------------------------  323 (432)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeeccccCCCceEeecCCCeEEEEecC-CCCceeEEEeec
Q psy10063        754 PILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLLSCPDFLFDFDTTREVTTTST-KVGKFDARFYHL  832 (894)
Q Consensus       754 ~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~fS~dg~~l~~as~d-~~g~~~I~vwd~  832 (894)
                       .+..|......+++ ||++.|++++.|+.+++|++.++..+..+...+..++||+||+++++.... +..+..|+|||.
T Consensus       324 -~~~~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~  401 (432)
T d1qksa2         324 -TLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD  401 (432)
T ss_dssp             -TTCSSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred             -cCCCCCCeeeEEEE-EechhhcccccCCceEecccccccccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEEC
Confidence             00011112223444 899999999999999999987765555444444467899999998766532 111226999999


Q ss_pred             CCcceeeeccCCCCCeeEEEEeeCCcEE
Q psy10063        833 IFEEEFARIKGHFGPINSLAFHPDGKSY  860 (894)
Q Consensus       833 ~tg~~l~~l~gH~~~V~~l~fSpdg~~L  860 (894)
                      +++++...+++..      .++|+|++-
T Consensus       402 ~T~k~~~~i~~~~------~~tp~G~~~  423 (432)
T d1qksa2         402 KTLELKHVIKDER------LVTPTGKFN  423 (432)
T ss_dssp             TTTEEEEEECCTT------CCSEEEEEE
T ss_pred             CCceEEeEecCCC------ccCCCeeEE
Confidence            9999988887642      236777653

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=5.2e-21  Score=202.05  Aligned_cols=195  Identities=14%  Similarity=0.070  Sum_probs=146.9

Q ss_pred             eeeeccCccEEEecCCCeEEEEEecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC
Q psy10063        383 LNSMSPAARKLATNAEPVVKMQVTDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSK  462 (894)
Q Consensus       383 ~~~~s~dg~~l~~~~~~~~~~~l~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp  462 (894)
                      +..-+.||...+.....    ...+|...|.+++|++++ .|++++.|+.|++|++...+       ... .+.++++++
T Consensus        24 l~sgs~Dg~v~~Wd~~~----~~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~-------~~~-~~~~~~~~~   90 (287)
T d1pgua2          24 LISGSYDGRIMEWSSSS----MHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHE-------FGS-QPKVASANN   90 (287)
T ss_dssp             TEEEETTSCEEETTTTE----EECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEE-------CSS-CEEEEEECS
T ss_pred             EEEEeCCCeEEEEECCC----CCCCCCCCEEEEEecCCC-eEEEEeeccccccccccccc-------ccc-ceeeeeecc
Confidence            33444455554443222    357899999999999764 67899999999999975322       122 567778888


Q ss_pred             CCCEEEEEeCCCCc--------------cceEEEEEecCCCEEEEEECCC-CEEEEEcCCCcEEEEEe--CCCCeeEEEE
Q psy10063        463 DATMFITASHSQAV--------------EPINDMQFSKDATMFITASKDH-TAKLFTTHDRQLLKTYT--TERPVNSAAL  525 (894)
Q Consensus       463 dg~~la~~~~d~~i--------------~~V~~l~~spdg~~L~sgs~Dg-~V~iwdl~~~~~~~~~~--~~~~v~~l~~  525 (894)
                      ++..++.+..+..+              ......++++++.++++++.|+ .|++|++...+....+.  +...+.+++|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~  170 (287)
T d1pgua2          91 DGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI  170 (287)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE
T ss_pred             CCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEe
Confidence            87777766554422              1223456777888888888775 69999998777666655  3578999999


Q ss_pred             cCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE-EccCCCCCeEEEEEecC----------CCEEEEEeCC
Q psy10063        526 SPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA-RIKGHFGPINSLAFHPD----------GKSYASGGED  594 (894)
Q Consensus       526 spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~-~l~~h~~~V~~l~~spd----------g~~l~sgs~D  594 (894)
                      +|+|.+|++++.++.              |++||+..++.+. .+.+|...|.+++|+|+          +.+|++|+.|
T Consensus       171 s~~~~~l~~g~~dg~--------------i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D  236 (287)
T d1pgua2         171 SPSETYIAAGDVMGK--------------ILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD  236 (287)
T ss_dssp             CTTSSEEEEEETTSC--------------EEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred             ccCcccccccccccc--------------ccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCC
Confidence            999999999999997              8899998887665 46789999999999875          4689999999


Q ss_pred             CcEEEEECCC
Q psy10063        595 GFLISNTLSN  604 (894)
Q Consensus       595 g~I~vwdl~~  604 (894)
                      +.|+||+++.
T Consensus       237 ~~i~iw~~~~  246 (287)
T d1pgua2         237 TNIFIYSVKR  246 (287)
T ss_dssp             SCEEEEESSC
T ss_pred             CeEEEEECCC
Confidence            9999999854

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.86  E-value=6.6e-19  Score=193.10  Aligned_cols=170  Identities=11%  Similarity=-0.005  Sum_probs=127.4

Q ss_pred             EecCCCCEEEEEEccCCCEEEEe-----cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        405 VTDQSAKITSLLWGNLDQYIITG-----HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       405 l~~H~~~V~~l~~spdg~~L~sg-----s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ...|.+.+.+++|+|||++|+..     +.++.|.|||..+++.+..+..+..   ..++|+|||++|+++..+      
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~---~~~a~SpDG~~l~va~~~------   86 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL---PNPVAAHSGSEFALASTS------   86 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCC---ccEEEcCCCCEEEEEeec------
Confidence            44688999999999999988764     2346799999999999999887654   368899988888776543      


Q ss_pred             EEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCC--------CeeEEEEcCCCCEEEEEECCCCeEEEeccCccc
Q psy10063        480 NDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTER--------PVNSAALSPILPHVVLGGGQEAREVTTTSTKVG  551 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~--------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~  551 (894)
                              +..++.+..++.|+|||+.+++++..+....        ....+.|+++++++++...+...          
T Consensus        87 --------~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~----------  148 (373)
T d2madh_          87 --------FSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP----------  148 (373)
T ss_pred             --------CCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCC----------
Confidence                    2345566778999999999999988876432        23557888888877766543321          


Q ss_pred             eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCE-EEEEeCCCcEEEEECCCCcc
Q psy10063        552 KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKS-YASGGEDGFLISNTLSNGLD  607 (894)
Q Consensus       552 ~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~-l~sgs~Dg~I~vwdl~~~~~  607 (894)
                        .+.+|+....+.+..    ...+.++.|+++|+. +++.+.|+.+++|+...++.
T Consensus       149 --~~~~~~~~~~~~~~~----~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~  199 (373)
T d2madh_         149 --AVGLVVQGGSSDDQL----LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAA  199 (373)
T ss_pred             --ceEEeeccCCeEEEE----eccceeEEEecCCCcEEEEEcCCCeEEEEEcCCcee
Confidence              167888777665543    334678899999875 46788999999999877653

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.85  E-value=1.6e-18  Score=182.97  Aligned_cols=266  Identities=11%  Similarity=0.039  Sum_probs=195.3

Q ss_pred             ccCccEEEec-CCCeEEEEEecCCCCEEEEEEccCCCEEE-EecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCC
Q psy10063        387 SPAARKLATN-AEPVVKMQVTDQSAKITSLLWGNLDQYII-TGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDA  464 (894)
Q Consensus       387 s~dg~~l~~~-~~~~~~~~l~~H~~~V~~l~~spdg~~L~-sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg  464 (894)
                      +.|+.+.+.. ....+...+. +...+.+++|+|||++|+ +++.++.|++||+.+++.++.+..+..            
T Consensus         9 ~~~~~v~v~D~~t~~~~~~i~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~------------   75 (301)
T d1l0qa2           9 SESDNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS------------   75 (301)
T ss_dssp             TTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS------------
T ss_pred             CCCCEEEEEECCCCeEEEEEE-CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc------------
Confidence            4445443333 2334443443 346689999999999874 667889999999999999999987764            


Q ss_pred             CEEEEEeCCCCccceEEEEEecCCCEEEE-EECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEE
Q psy10063        465 TMFITASHSQAVEPINDMQFSKDATMFIT-ASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREV  543 (894)
Q Consensus       465 ~~la~~~~d~~i~~V~~l~~spdg~~L~s-gs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v  543 (894)
                                    +..++|++++.+++. +..++.+++|++..++++..+.+...+.+++|+|+|+++++.+..+..  
T Consensus        76 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~--  139 (301)
T d1l0qa2          76 --------------PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT--  139 (301)
T ss_dssp             --------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE--
T ss_pred             --------------ccccccccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccc--
Confidence                          567777777775554 456678999999999999999998899999999999999888776643  


Q ss_pred             EeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-CcEEEEECCCCccccCCCceeeeEECcC
Q psy10063        544 TTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-GFLISNTLSNGLDISEGSFTSSSTQQPD  622 (894)
Q Consensus       544 ~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D-g~I~vwdl~~~~~~~~~~~v~~~~~spd  622 (894)
                                 +.+|+...++.+..+..+ ..+.+++|+++++++++++.+ +.+.+|+....+...             
T Consensus       140 -----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  194 (301)
T d1l0qa2         140 -----------VSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID-------------  194 (301)
T ss_dssp             -----------EEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-------------
T ss_pred             -----------eeeeeccccceeeecccC-CCceEEEeeccccceeeecccccccccccccceeeee-------------
Confidence                       888999999888877654 457899999999988887765 445566543321000             


Q ss_pred             CcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcc
Q psy10063        623 GLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQ  702 (894)
Q Consensus       623 g~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~  702 (894)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (301)
T d1l0qa2         195 --------------------------------------------------------------------------------  194 (301)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEec---
Q psy10063        703 IEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALAL---  779 (894)
Q Consensus       703 ~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs---  779 (894)
                                                                          .+ .+...+..+++++++.+++++.   
T Consensus       195 ----------------------------------------------------~~-~~~~~~~~~~~~~~g~~~~v~~~~~  221 (301)
T d1l0qa2         195 ----------------------------------------------------TV-KVEAAPSGIAVNPEGTKAYVTNVDK  221 (301)
T ss_dssp             ----------------------------------------------------EE-ECSSEEEEEEECTTSSEEEEEEECS
T ss_pred             ----------------------------------------------------cc-cccCCcceeeccccccccccccccc
Confidence                                                                00 0111234677888888877654   


Q ss_pred             CCCcEEEEEccCCceeecccc--CCCceEeecCCCeEEEEec-CCCCceeEEEeecCCcceeeeccC
Q psy10063        780 ADKVSERYRDRKNKATAGFLL--SCPDFLFDFDTTREVTTTS-TKVGKFDARFYHLIFEEEFARIKG  843 (894)
Q Consensus       780 ~Dg~I~iwd~~~~~~~~~~~~--~~~~~~fS~dg~~l~~as~-d~~g~~~I~vwd~~tg~~l~~l~g  843 (894)
                      .++.|++||+.+++.+..+..  ....++|+|||++|+++.. ++    .|+|||+++++++..+..
T Consensus       222 ~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~l~va~~~~~----~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         222 YFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCN----TVSVIDTATNTITATMAV  284 (301)
T ss_dssp             SCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEEC
T ss_pred             eeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCEEEEEECCCC----eEEEEECCCCeEEEEEeC
Confidence            346799999999888765543  3457889999999865544 44    699999999999988763

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.81  E-value=3e-18  Score=186.03  Aligned_cols=300  Identities=11%  Similarity=-0.047  Sum_probs=195.1

Q ss_pred             EEEEEccCCCEEEEec-----CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecC
Q psy10063        413 TSLLWGNLDQYIITGH-----AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKD  487 (894)
Q Consensus       413 ~~l~~spdg~~L~sgs-----~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spd  487 (894)
                      .-.+.+|||++|++..     .+..|.|||..+++.+..+..+..   ..++|||||++|++.+..              
T Consensus         5 ~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~---~~~a~SpDg~~l~v~~~~--------------   67 (355)
T d2bbkh_           5 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL---PNPVVADDGSFIAHASTV--------------   67 (355)
T ss_dssp             BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS---CEEEECTTSSCEEEEEEE--------------
T ss_pred             EeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC---CceEEcCCCCEEEEEeCC--------------
Confidence            3345689999887653     355799999999999999886643   357777777766544321              


Q ss_pred             CCEEEEEECCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEe
Q psy10063        488 ATMFITASKDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYH  559 (894)
Q Consensus       488 g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd  559 (894)
                      +..+..++.|+.|++||+.+++++..+...        .....++|+++|++++++......            .+.+|+
T Consensus        68 ~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~------------~~~~~~  135 (355)
T d2bbkh_          68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP------------AVGVVD  135 (355)
T ss_dssp             EEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC------------EEEEEE
T ss_pred             CccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCc------------eeeeee
Confidence            112334566899999999999998877531        234678999999999887654421            278999


Q ss_pred             ccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCcEEEecCCeEEEEecc
Q psy10063        560 LIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSH  639 (894)
Q Consensus       560 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~  639 (894)
                      ...++.+..+..+....   .+......++..+.||...+|.......+                         ..+...
T Consensus       136 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dg~~~~v~~~~~~~~-------------------------~~~~~~  187 (355)
T d2bbkh_         136 LEGKAFKRMLDVPDCYH---IFPTAPDTFFMHCRDGSLAKVAFGTEGTP-------------------------EITHTE  187 (355)
T ss_dssp             TTTTEEEEEEECCSEEE---EEEEETTEEEEEETTSCEEEEECCSSSCC-------------------------EEEECC
T ss_pred             cCCCcEeeEEecCCcce---EeecCCcceEEEcCCCCEEEEEecCCCeE-------------------------EEEecc
Confidence            99998888776543221   11122334444555665555543221100                         000000


Q ss_pred             cCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEE
Q psy10063        640 STSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRL  719 (894)
Q Consensus       640 ~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l  719 (894)
                      ..                                                                              
T Consensus       188 ~~------------------------------------------------------------------------------  189 (355)
T d2bbkh_         188 VF------------------------------------------------------------------------------  189 (355)
T ss_dssp             CC------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             EecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc-
Q psy10063        720 HVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVSERYRDRKNKATAGF-  798 (894)
Q Consensus       720 ~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~-  798 (894)
                                                          ...+...+..+++.+++..++.++.++.+++|++...+..... 
T Consensus       190 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  233 (355)
T d2bbkh_         190 ------------------------------------HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA  233 (355)
T ss_dssp             ------------------------------------SCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCC
T ss_pred             ------------------------------------cceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEec
Confidence                                                0001111122344566677777788888888887765432100 


Q ss_pred             --------------ccCCCceEeecCCCeEEEEecCCC------CceeEEEeecCCcceeeeccCCCCCeeEEEEeeCCc
Q psy10063        799 --------------LLSCPDFLFDFDTTREVTTTSTKV------GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGK  858 (894)
Q Consensus       799 --------------~~~~~~~~fS~dg~~l~~as~d~~------g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~  858 (894)
                                    ..+...+++++++.++++...++.      +...|++||+.+++.+..+..+ ..+.+|+|+|||+
T Consensus       234 ~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~-~~~~~~a~spDG~  312 (355)
T d2bbkh_         234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEK  312 (355)
T ss_dssp             EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSS
T ss_pred             cCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC-CCEEEEEEcCCCC
Confidence                          122345779999999887765432      1235999999999998887643 5588999999997


Q ss_pred             --EEEEecCCCcEEEEecCccccccccc
Q psy10063        859 --SYASGGEDGFVRLHTFDQAYFDYTFD  884 (894)
Q Consensus       859 --~LaS~s~Dg~V~vWdl~~~~~~~~~~  884 (894)
                        ++++++.|+.|+|||+++++++..+.
T Consensus       313 ~~l~v~~~~d~~i~v~D~~tg~~~~~i~  340 (355)
T d2bbkh_         313 PLLYALSTGDKTLYIHDAESGEELRSVN  340 (355)
T ss_dssp             CEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             eEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence              45678889999999999999888775

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.80  E-value=5.2e-18  Score=181.85  Aligned_cols=306  Identities=12%  Similarity=0.014  Sum_probs=193.8

Q ss_pred             eeeeeccCccEEEecCC-CeEEEEEe--cCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCC----C
Q psy10063        382 RLNSMSPAARKLATNAE-PVVKMQVT--DQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAK----E  453 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~-~~~~~~l~--~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~----~  453 (894)
                      .++..+.|+++.+.... ..+...+.  ++...+.+++|+|||++| ++++.++.|++||+.+++++..+..+..    .
T Consensus         3 ~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~   82 (337)
T d1pbyb_           3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK   82 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccccc
Confidence            34556667766554433 34444443  456778999999999987 5677899999999999999998876543    1


Q ss_pred             CeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEE
Q psy10063        454 PINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVV  533 (894)
Q Consensus       454 ~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~  533 (894)
                      .+..++|+||+++++++..+...            ........+..+.+||...++++..+.....+.+++|++||++++
T Consensus        83 ~~~~v~~s~dg~~l~~~~~~~~~------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~  150 (337)
T d1pbyb_          83 SLFGAALSPDGKTLAIYESPVRL------------ELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLY  150 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEE------------CSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEE
T ss_pred             ceeeEEEcCCCcEEEEeecCCcc------------eeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEE
Confidence            23456666666666554332111            111223357889999999999999999888899999999999999


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC-CcEEEEECCCCccccCCC
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED-GFLISNTLSNGLDISEGS  612 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D-g~I~vwdl~~~~~~~~~~  612 (894)
                      +++.+                +.+||...++.+..+..+... ....+.+++..+...... +.+.++.....       
T Consensus       151 ~~~~~----------------~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  206 (337)
T d1pbyb_         151 GLGRD----------------LHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTAR-------  206 (337)
T ss_dssp             EESSS----------------EEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEB-------
T ss_pred             EEcCC----------------cceeeeecCcEEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeee-------
Confidence            87643                678898888887776554332 223344444332222211 11111111000       


Q ss_pred             ceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCc
Q psy10063        613 FTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQ  692 (894)
Q Consensus       613 ~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  692 (894)
                                                     .+......+.  .+..+.+|+                            
T Consensus       207 -------------------------------~~~~~~~~~~--~~~~~~~~~----------------------------  225 (337)
T d1pbyb_         207 -------------------------------KDIDPADPTA--YRTGLLTMD----------------------------  225 (337)
T ss_dssp             -------------------------------TTSCTTSGGG--EEEEEEEEE----------------------------
T ss_pred             -------------------------------eccceeeecc--cCccEEEEE----------------------------
Confidence                                           0000000000  000011110                            


Q ss_pred             ceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCC
Q psy10063        693 QSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKR  772 (894)
Q Consensus       693 ~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg  772 (894)
                                                                     ...+...      ...+..+...+.++++++++
T Consensus       226 -----------------------------------------------~~~~~~~------~~~~~~~~~~~~~~~~~~~~  252 (337)
T d1pbyb_         226 -----------------------------------------------LETGEMA------MREVRIMDVFYFSTAVNPAK  252 (337)
T ss_dssp             -----------------------------------------------TTTCCEE------EEEEEECSSCEEEEEECTTS
T ss_pred             -----------------------------------------------cCCCcEE------EEEecCCCcceEEEEecccc
Confidence                                                           0000000      01123355567788899999


Q ss_pred             CEEEEecCCCcEEEEEccCCceeeccccC--CCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccC
Q psy10063        773 EKLALALADKVSERYRDRKNKATAGFLLS--CPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKG  843 (894)
Q Consensus       773 ~~Latgs~Dg~I~iwd~~~~~~~~~~~~~--~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~g  843 (894)
                      .+++.+  ++.|++||+.+++.+..+..+  ...++|++||++|++++.++    .|+|||+++++.+..++.
T Consensus       253 ~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~----~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         253 TRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALG----DLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             SEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSS----EEEEEETTTCCEEEEEEC
T ss_pred             eEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEeCCC----cEEEEECCCCcEEEEEEC
Confidence            998876  588999999999987765544  45788999999999988776    699999999999988763

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1.6e-17  Score=178.26  Aligned_cols=144  Identities=11%  Similarity=0.077  Sum_probs=102.6

Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEe--cCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE-CCCC
Q psy10063        423 YIITGHAKGDICTWDLRMGRELESI--SGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS-KDHT  499 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~tg~~~~~l--~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs-~Dg~  499 (894)
                      .+++++.|+.|+||++.....+..+  ..|.+                         .+.+|+|+|||++|++++ .|+.
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~-------------------------~v~~la~spDG~~L~v~~~~d~~   60 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPG-------------------------QVQPMVVSPDKRYLYVGVRPEFR   60 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSS-------------------------CCCCEEECTTSSEEEEEETTTTE
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCC-------------------------CEeEEEEeCCCCEEEEEECCCCe
Confidence            4467788999999999755333222  23545                         677888888888886555 5899


Q ss_pred             EEEEEcCCCcEE----EEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEE--EccCCC
Q psy10063        500 AKLFTTHDRQLL----KTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFA--RIKGHF  573 (894)
Q Consensus       500 V~iwdl~~~~~~----~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~--~l~~h~  573 (894)
                      |++|++......    ........+..++|+|||++|++++.++..             |++|+........  ....+.
T Consensus        61 i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~-------------v~~~~~~~~~~~~~~~~~~~~  127 (333)
T d1ri6a_          61 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGN-------------VSVTRLEDGLPVGVVDVVEGL  127 (333)
T ss_dssp             EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTE-------------EEEEEEETTEEEEEEEEECCC
T ss_pred             EEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCc-------------eeeeccccccceecccccCCC
Confidence            999999765422    233345678899999999999999876542             6666665444333  334567


Q ss_pred             CCeEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10063        574 GPINSLAFHPDGKSYASGGE-DGFLISNTLSN  604 (894)
Q Consensus       574 ~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl~~  604 (894)
                      ..+.++.|++|+++++.++. +..|.+|++..
T Consensus       128 ~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~  159 (333)
T d1ri6a_         128 DGCHSANISPDNRTLWVPALKQDRICLFTVSD  159 (333)
T ss_dssp             TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             ccceEEEeeecceeeeccccccceeeEEEecc
Confidence            78889999999998887775 45688888654

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.77  E-value=9.4e-16  Score=167.50  Aligned_cols=290  Identities=8%  Similarity=-0.066  Sum_probs=184.2

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCC
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHS  473 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d  473 (894)
                      .+..|..  ..++|+|||++|++++          .++.|+|||+.+++++..+..+.. ....+...            
T Consensus        62 ~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~-~~~~~~~~------------  126 (373)
T d2madh_          62 HVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-PRFDVGPY------------  126 (373)
T ss_pred             EEeCCCC--ccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCc-ceeEeccC------------
Confidence            3444443  3799999999998874          457899999999999999887765 34333332            


Q ss_pred             CCccceEEEEEecCCCEEEEEE--CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEE-EECCCCeEEEeccCcc
Q psy10063        474 QAVEPINDMQFSKDATMFITAS--KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVL-GGGQEAREVTTTSTKV  550 (894)
Q Consensus       474 ~~i~~V~~l~~spdg~~L~sgs--~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~-~~~~~~~~v~~~~~~~  550 (894)
                           ...+.|++++++++...  .++.+.+|+...++.+....   ...++.|+++|+.+++ .+.++.          
T Consensus       127 -----~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~g~~~~v~~~~dg~----------  188 (373)
T d2madh_         127 -----SWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS---SPTCYHIHPGAPSTFYLLCAQGG----------  188 (373)
T ss_pred             -----CCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec---cceeEEEecCCCcEEEEEcCCCe----------
Confidence                 34578889888776654  45689999988877665443   4568899999987754 555665          


Q ss_pred             ceeeEEEEeccccceEEEccCC------CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccCCCceeeeEECcCCc
Q psy10063        551 GKFDARFYHLIFEEEFARIKGH------FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISEGSFTSSSTQQPDGL  624 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h------~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~~~~v~~~~~spdg~  624 (894)
                          +.+|+...++....+..+      ......+.+++++. ++..+.++.+++|+........               
T Consensus       189 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~---------------  248 (373)
T d2madh_         189 ----LAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATN---------------  248 (373)
T ss_pred             ----EEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEEE---------------
Confidence                677777776665544322      22334455666554 4555678889999886543110               


Q ss_pred             EEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCCeEEeeccCCcceeEeccCccee
Q psy10063        625 VYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVELTKDEQIE  704 (894)
Q Consensus       625 ~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s~~~~~~  704 (894)
                              +..+....                ...+.                                 ....+..   
T Consensus       249 --------~~~~~~~~----------------~~~~~---------------------------------~~~~~~~---  268 (373)
T d2madh_         249 --------KAPIDALS----------------GGRKA---------------------------------DTWRPGG---  268 (373)
T ss_pred             --------EEeecccc----------------CcEEe---------------------------------eeeccCc---
Confidence                    00000000                00000                                 0000000   


Q ss_pred             EEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCceEEEeeCCCCCEEEEecCCCcE
Q psy10063        705 MARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALALADKVS  784 (894)
Q Consensus       705 ~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latgs~Dg~I  784 (894)
                        ...+.+.+++.                                              ..+.+..++..++....++.|
T Consensus       269 --~~~~~~~~d~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~v  300 (373)
T d2madh_         269 --WQQVAYLKSSD----------------------------------------------GIYLLTSEQSAWKLHAAAKEV  300 (373)
T ss_pred             --ceeeEEecCCC----------------------------------------------eEEEecCCCceEEeecCCCeE
Confidence              00011111111                                              112233456677788888999


Q ss_pred             EEEEccCCceeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeeeccCCCCCeeEEEEeeC
Q psy10063        785 ERYRDRKNKATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPD  856 (894)
Q Consensus       785 ~iwd~~~~~~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpd  856 (894)
                      .+||...++.+..+..  ....++|++||++++.+.....+  .|+|||+.+|++++.+.+|......|++..+
T Consensus       301 ~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~--~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         301 TSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTE--VLHIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             EEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCC--eEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence            9999999988776553  34568899999976443333222  6999999999999999998888888888654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.77  E-value=1.2e-17  Score=179.80  Aligned_cols=309  Identities=12%  Similarity=0.003  Sum_probs=183.7

Q ss_pred             eeccCccEEEecCC-----------CeEEEEEe-cCCCCEEEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCC
Q psy10063        385 SMSPAARKLATNAE-----------PVVKMQVT-DQSAKITSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHA  451 (894)
Q Consensus       385 ~~s~dg~~l~~~~~-----------~~~~~~l~-~H~~~V~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~  451 (894)
                      +|+++|++|+.+..           ..+...+. .|...+.+|+|+|||++| ++++.++.|++||+.+++.+..+....
T Consensus         3 a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~   82 (346)
T d1jmxb_           3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS   82 (346)
T ss_dssp             CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC
T ss_pred             cCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccc
Confidence            46666666665443           23333444 567788999999999987 556688999999999999988876543


Q ss_pred             CC-----CeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEE---EEeCCCCeeEE
Q psy10063        452 KE-----PINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLK---TYTTERPVNSA  523 (894)
Q Consensus       452 ~~-----~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~---~~~~~~~v~~l  523 (894)
                      ..     .+..++|+|||++|+++..+...            ........++.+.+||...++...   .......+..+
T Consensus        83 ~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (346)
T d1jmxb_          83 VPGEVGRSMYSFAISPDGKEVYATVNPTQR------------LNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLM  150 (346)
T ss_dssp             STTEEEECSSCEEECTTSSEEEEEEEEEEE------------CSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCE
T ss_pred             cccccCCceEEEEEecCCCEEEEEecCCcc------------eeeeeccCcceEEEEecccceeeeEEEeeeccCceEEE
Confidence            21     24456677777666554432110            011123457889999988776543   33345667778


Q ss_pred             EEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEEC
Q psy10063        524 ALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTL  602 (894)
Q Consensus       524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl  602 (894)
                      .++++++.++.+. +..+  |..           +   .++.+..+..+ ..+..+.++|++..++... .++.+.+++.
T Consensus       151 ~~~~~~~~~~~~~-~~~~--~~~-----------~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (346)
T d1jmxb_         151 RAADDGSLYVAGP-DIYK--MDV-----------K---TGKYTVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYT  212 (346)
T ss_dssp             EECTTSCEEEESS-SEEE--ECT-----------T---TCCEEEEECST-TCCCTTBCCCBCCCCCCCCCTTCEEEEEEE
T ss_pred             EecCCCEEEEeCC-cceE--EEc-----------c---CCCEEEEEecC-CCccceEEeccccEEEEEecCCCceEeeee
Confidence            8888887665543 3331  111           1   12233333333 3345566778877655443 4445555543


Q ss_pred             CCCccccCCCceeeeEECcCCcEEEecCCeEEEEecccCCCCCCCeeeeccccCCCceEEechhhHHHhhhcccccCCCC
Q psy10063        603 SNGLDISEGSFTSSSTQQPDGLVYPSQGGHIHSLSSHSTSSTDTGGVFSGSRVDDSGVELTKDEQIEMARNRMSINHSGT  682 (894)
Q Consensus       603 ~~~~~~~~~~~v~~~~~spdg~~l~~~~g~i~~~~~~~~~~~d~~~i~sgs~~~d~~i~l~~~~~~~~~~~~~~~~~~g~  682 (894)
                      ....             .....                       .+..+.  ....+.+|+                  
T Consensus       213 ~~~~-------------~~~~~-----------------------~~~~~~--~~~~~~~~~------------------  236 (346)
T d1jmxb_         213 IARF-------------KDDKQ-----------------------DPATAD--LLYGYLSVD------------------  236 (346)
T ss_dssp             EEEC-------------------------------------------CCCE--EEEEEEEEE------------------
T ss_pred             eeee-------------ccCce-----------------------eEeecc--CCceEEEEE------------------
Confidence            1100             00000                       000000  000111111                  


Q ss_pred             eEEeeccCCcceeEeccCcceeEEeeeEEEcCCCCEEEecccCccccccCCcceeeccccCcccccCCCCcceecCCCCc
Q psy10063        683 RLHVNPFDEQQSVELTKDEQIEMARNRMSINHSGTRLHVNPFDEQQSVDASPLMTWGHIEGTPFKLDGSDTPILAGPVDI  762 (894)
Q Consensus       683 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~g~~l~v~~~~~~~~~~~~~l~~~~~~~g~~~~~dg~~~~~~~~h~~~  762 (894)
                                                                               ...+.      ........|...
T Consensus       237 ---------------------------------------------------------~~~~~------~~~~~~~~~~~~  253 (346)
T d1jmxb_         237 ---------------------------------------------------------LKTGK------THTQEFADLTEL  253 (346)
T ss_dssp             ---------------------------------------------------------TTTCC------EEEEEEEECSSC
T ss_pred             ---------------------------------------------------------CCCCc------eEEEEeecccce
Confidence                                                                     00000      000123345666


Q ss_pred             eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecccc--CCCceEeecCCCeEEEEecCCCCceeEEEeecCCcceeee
Q psy10063        763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGFLL--SCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEFAR  840 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~~~--~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l~~  840 (894)
                      +..+.+++++.+++.... +.|++||...++.+..+..  ....++|++||+++++++.++    .|+|||+++++++..
T Consensus       254 ~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~----~v~v~D~~t~~~i~~  328 (346)
T d1jmxb_         254 YFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFN----DLAVFNPDTLEKVKN  328 (346)
T ss_dssp             EEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSS----EEEEEETTTTEEEEE
T ss_pred             eEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCC----cEEEEECccCCEEEE
Confidence            788888999888887655 5699999999988766553  356889999999999998776    699999999999998


Q ss_pred             ccCCCCC
Q psy10063        841 IKGHFGP  847 (894)
Q Consensus       841 l~gH~~~  847 (894)
                      ++.+.+.
T Consensus       329 i~~p~g~  335 (346)
T d1jmxb_         329 IKLPGGD  335 (346)
T ss_dssp             EECSSSC
T ss_pred             EECCCCC
Confidence            8855443

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.74  E-value=1.7e-16  Score=171.94  Aligned_cols=157  Identities=10%  Similarity=-0.018  Sum_probs=109.1

Q ss_pred             EEEEEccCCCEEEEe----------cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        413 TSLLWGNLDQYIITG----------HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       413 ~~l~~spdg~~L~sg----------s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ..++|||||++|++.          +.|+.|+|||+.+++.+..+..+.. ....+.                 .....+
T Consensus        50 ~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~-~~~~~~-----------------~~~~~~  111 (355)
T d2bbkh_          50 PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA-PRFLVG-----------------TYPWMT  111 (355)
T ss_dssp             CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC-CCCCBS-----------------CCGGGE
T ss_pred             CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCc-ceeecC-----------------CCCceE
Confidence            378999999988764          3478999999999999888775543 111110                 134567


Q ss_pred             EEecCCCEEEEEE--CCCCEEEEEcCCCcEEEEEeCCC--------CeeEEEEcCCCCEEEEEECCCCeEEEeccCccce
Q psy10063        483 QFSKDATMFITAS--KDHTAKLFTTHDRQLLKTYTTER--------PVNSAALSPILPHVVLGGGQEAREVTTTSTKVGK  552 (894)
Q Consensus       483 ~~spdg~~L~sgs--~Dg~V~iwdl~~~~~~~~~~~~~--------~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~  552 (894)
                      +|+++|++++.+.  .+..+.+|+..+++.+..+....        ....+.+++||+.+++...+...           
T Consensus       112 ~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~-----------  180 (355)
T d2bbkh_         112 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT-----------  180 (355)
T ss_dssp             EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSC-----------
T ss_pred             EEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCe-----------
Confidence            8889998887765  45679999999999988876533        23446677777766665444331           


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                        +.+++.....     ..+...+..+.+.+++..++.++.++.+++|++..+
T Consensus       181 --~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  226 (355)
T d2bbkh_         181 --PEITHTEVFH-----PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG  226 (355)
T ss_dssp             --CEEEECCCCS-----CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS
T ss_pred             --EEEEeccccc-----ceecceeeeccccCCCCeEEEecCCCeEEEEecCCC
Confidence              3334433222     234445666788888899999999999999998764

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.72  E-value=1.5e-16  Score=180.65  Aligned_cols=152  Identities=14%  Similarity=0.146  Sum_probs=105.4

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      .+.|.+|+++|+..  |+.|.+||+.+++....+..+.-                    ......|.++.|||||++|+.
T Consensus        21 ~~~W~~d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~~~--------------------~~~~~~i~~~~~SpDg~~i~~   78 (470)
T d2bgra1          21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF--------------------DEFGHSINDYSISPDGQFILL   78 (470)
T ss_dssp             CCEECSSSEEEEES--SSCEEEEETTTCCEEEEECTTTT--------------------TTSSSCCCEEEECTTSSEEEE
T ss_pred             CCEeCCCCEEEEEc--CCcEEEEECCCCCEEEEEchhhh--------------------hhccCccceeEECCCCCEEEE
Confidence            47799999887754  67899999999998776665431                    000013445555555555554


Q ss_pred             EE---------CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccc
Q psy10063        494 AS---------KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEE  564 (894)
Q Consensus       494 gs---------~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~  564 (894)
                      ++         .++.+.|||++++++.....+...+..+.|||||++|+......               +.+|++..++
T Consensus        79 ~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~~~~---------------l~~~~~~~g~  143 (470)
T d2bgra1          79 EYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNND---------------IYVKIEPNLP  143 (470)
T ss_dssp             EEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTE---------------EEEESSTTSC
T ss_pred             EECCcceeeeccCceEEEEECCCCcccccccCCccccccccccCcceeeEeeccc---------------ceEEECCCCc
Confidence            42         35678999999998766555678899999999999999976543               7778877776


Q ss_pred             eEEEccC------------------CCCCeEEEEEecCCCEEEEEeCCCc-EEEEEC
Q psy10063        565 EFARIKG------------------HFGPINSLAFHPDGKSYASGGEDGF-LISNTL  602 (894)
Q Consensus       565 ~~~~l~~------------------h~~~V~~l~~spdg~~l~sgs~Dg~-I~vwdl  602 (894)
                      .++....                  +.+....+.|+|||++|+....|.. +..|.+
T Consensus       144 ~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~  200 (470)
T d2bgra1         144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY  200 (470)
T ss_dssp             CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred             eeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence            6654322                  2234566889999999999876544 555544

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=3.4e-16  Score=171.49  Aligned_cols=165  Identities=10%  Similarity=-0.075  Sum_probs=112.1

Q ss_pred             CCCCEEEEEEccCCCEE--EE-ecCCC--cEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        408 QSAKITSLLWGNLDQYI--IT-GHAKG--DICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L--~s-gs~Dg--~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      +.+....++..++++..  +. ...++  .|.+||..+++.+..+.++.. .  .++|+|||++|++.+..         
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~-~--~~a~spDg~~i~~~~~~---------   85 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTS---------   85 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEE---------
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCC-C--cceECCCCCEEEEEccc---------
Confidence            44555556677888743  22 34444  477779999999998887754 2  46777777766544311         


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC--------CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceee
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE--------RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFD  554 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--------~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~  554 (894)
                       +    ..++.|+.|+.|++||..+++++..+..+        .....++|+|||++|+++..+..             .
T Consensus        86 -~----~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~-------------~  147 (368)
T d1mdah_          86 -F----ARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS-------------A  147 (368)
T ss_dssp             -E----TTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS-------------C
T ss_pred             -C----ccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCC-------------e
Confidence             1    11333556788999999999999887631        23457999999999998875433             2


Q ss_pred             EEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        555 ARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       555 v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                      +.+||+..++.+..+..+.....   +......++..+.||.+.+|++...
T Consensus       148 v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~  195 (368)
T d1mdah_         148 AAGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAA  195 (368)
T ss_dssp             EEEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSS
T ss_pred             EEEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCC
Confidence            88999999999888766544321   1123446677778888888887654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=6.4e-14  Score=149.51  Aligned_cols=168  Identities=10%  Similarity=0.085  Sum_probs=115.2

Q ss_pred             EEEEEecCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccce
Q psy10063        401 VKMQVTDQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPI  479 (894)
Q Consensus       401 ~~~~l~~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V  479 (894)
                      ..+...+|.+.|.+|+|||||++|+++ ..|+.|++|++........+..+..          .            ...+
T Consensus        28 ~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~----------~------------~~~p   85 (333)
T d1ri6a_          28 TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA----------L------------PGSL   85 (333)
T ss_dssp             EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE----------C------------SSCC
T ss_pred             EEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc----------c------------CCCc
Confidence            344556799999999999999988654 5589999999986643332221110          0            0046


Q ss_pred             EEEEEecCCCEEEEEEC-CCCEEEEEcCCCcEEEEEe---CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        480 NDMQFSKDATMFITASK-DHTAKLFTTHDRQLLKTYT---TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs~-Dg~V~iwdl~~~~~~~~~~---~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      ..|+|+|||++|++++. ++.|++|+...........   +...+.++.|+++++++++++..+..             |
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~-------------i  152 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR-------------I  152 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTE-------------E
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccce-------------e
Confidence            67888889998888875 6688999888776554433   45678999999999999988866542             5


Q ss_pred             EEEeccccceEEE------ccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECC
Q psy10063        556 RFYHLIFEEEFAR------IKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLS  603 (894)
Q Consensus       556 ~vwd~~~~~~~~~------l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~  603 (894)
                      .+|+.........      ...+......++|++++.+++... ..+.+.+|++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~  207 (333)
T d1ri6a_         153 CLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK  207 (333)
T ss_dssp             EEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred             eEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeec
Confidence            6666544322211      122445668899999988876554 44567777654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.57  E-value=3.8e-15  Score=163.41  Aligned_cols=157  Identities=10%  Similarity=-0.023  Sum_probs=107.3

Q ss_pred             EEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEe----------------CCCCccceEEEEEecC
Q psy10063        424 IITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITAS----------------HSQAVEPINDMQFSKD  487 (894)
Q Consensus       424 L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~----------------~d~~i~~V~~l~~spd  487 (894)
                      +++|+.+|.|+|||+.+++.++++..          |+|++.... +.                .|.+...+.+..++||
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpV----------fspd~~~g~-g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpD   82 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPV----------FNVDSATGW-GITNESKEILGGDQQYLNGDCHHPHISMTDGRYD   82 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECS----------SSBCTTTCT-TTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEE
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEe----------EcCCCCEEE-EECCccceEEecccccccCcccCCCcceecccCC
Confidence            56788999999999999999988842          444442210 00                1111124455556899


Q ss_pred             CCEEEEEE-CCCCEEEEEcCCCcEEEEEeC--CCCeeEEEEcCCCCEEEE--EECCCCeEE------EeccCccceeeEE
Q psy10063        488 ATMFITAS-KDHTAKLFTTHDRQLLKTYTT--ERPVNSAALSPILPHVVL--GGGQEAREV------TTTSTKVGKFDAR  556 (894)
Q Consensus       488 g~~L~sgs-~Dg~V~iwdl~~~~~~~~~~~--~~~v~~l~~spdg~~l~~--~~~~~~~~v------~~~~~~~~~~~v~  556 (894)
                      |++|++.. .+..|.+||++++++.+.+..  ...+..++|+|+|+++++  .+.+. +.+      +...  .....+.
T Consensus        83 Gr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~-v~~~~dg~~~~~~--~~~~~~~  159 (441)
T d1qnia2          83 GKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFV-IPQPNDGTDFSLD--NSYTMFT  159 (441)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSC-EESSCSSSCCCGG--GEEEEEE
T ss_pred             CCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCc-ccccCcccccccc--cccceEE
Confidence            99987664 678899999999999887764  578999999999995443  33322 211      1111  1112366


Q ss_pred             EEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCC
Q psy10063        557 FYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDG  595 (894)
Q Consensus       557 vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg  595 (894)
                      .+|..+.+....+... +.+..++|+|||+++++.+.+.
T Consensus       160 ~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~ns  197 (441)
T d1qnia2         160 AIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNS  197 (441)
T ss_dssp             EEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCT
T ss_pred             eecCccceeeEEEecC-CCccceEECCCCCEEEEEecCC
Confidence            7888888877766543 4578899999999998887654

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.56  E-value=1.1e-13  Score=156.42  Aligned_cols=108  Identities=9%  Similarity=-0.014  Sum_probs=81.4

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecC---------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHA---------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~---------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      .+|...|.++.|||||++|++++.         ++.+.|||+.+++ +..+..+..                        
T Consensus        58 ~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~------------------------  112 (470)
T d2bgra1          58 DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPN------------------------  112 (470)
T ss_dssp             TTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCT------------------------
T ss_pred             hhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCc------------------------
Confidence            345688999999999999998753         5678999999887 455677766                        


Q ss_pred             cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-------------------CCCeeEEEEcCCCCEEEEEEC
Q psy10063        477 EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-------------------ERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-------------------~~~v~~l~~spdg~~l~~~~~  537 (894)
                       .+..+.|||||++||.. .++.|++|++..++.++....                   .+....+.|||||++|++...
T Consensus       113 -~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~  190 (470)
T d2bgra1         113 -NTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF  190 (470)
T ss_dssp             -TEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred             -cccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEe
Confidence             56677777778877775 467789999888876654332                   123466889999999999876


Q ss_pred             CCC
Q psy10063        538 QEA  540 (894)
Q Consensus       538 ~~~  540 (894)
                      +..
T Consensus       191 d~~  193 (470)
T d2bgra1         191 NDT  193 (470)
T ss_dssp             ECT
T ss_pred             cCC
Confidence            543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.44  E-value=1.1e-12  Score=142.87  Aligned_cols=99  Identities=6%  Similarity=-0.087  Sum_probs=71.4

Q ss_pred             CeEEEEEecCCCCEEEEEEccCCCEEEEec----------CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEE
Q psy10063        399 PVVKMQVTDQSAKITSLLWGNLDQYIITGH----------AKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFI  468 (894)
Q Consensus       399 ~~~~~~l~~H~~~V~~l~~spdg~~L~sgs----------~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la  468 (894)
                      ..+...+.+|...  .++|+|||++|++++          .|+.|++||..+++++..+..+.. ....+.         
T Consensus        56 ~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~-~~~~~g---------  123 (368)
T d1mdah_          56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA-PRFSVG---------  123 (368)
T ss_dssp             TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS-CSCCBS---------
T ss_pred             CcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCcc-ceeccc---------
Confidence            3444445555544  589999999888753          467899999999999988875543 111000         


Q ss_pred             EEeCCCCccceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEEEEEeCC
Q psy10063        469 TASHSQAVEPINDMQFSKDATMFITAS-KDHTAKLFTTHDRQLLKTYTTE  517 (894)
Q Consensus       469 ~~~~d~~i~~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~~~  517 (894)
                              .....++|+|||++|+++. .++.|.+||+.+++++..+...
T Consensus       124 --------~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~  165 (368)
T d1mdah_         124 --------PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA  165 (368)
T ss_dssp             --------CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS
T ss_pred             --------CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeecc
Confidence                    0234678899999888776 4699999999999999888753

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.29  E-value=1.5e-09  Score=117.72  Aligned_cols=181  Identities=10%  Similarity=0.019  Sum_probs=111.6

Q ss_pred             ecCCCCEEEEEEccCCCEEEEecCCCcEEEEecCC-CeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEE
Q psy10063        406 TDQSAKITSLLWGNLDQYIITGHAKGDICTWDLRM-GRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQF  484 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~t-g~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~  484 (894)
                      ..+...+..|+|++++++|+++.. +.+..|.+.. +..+.......+.....++++++++.+.+......-..|..+.+
T Consensus        36 ~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~  114 (365)
T d1jofa_          36 IPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF  114 (365)
T ss_dssp             CCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred             ccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence            345666778999999999988865 4677887753 33333222111225678889999986555444333346777777


Q ss_pred             ecCCCEEEEEECCCCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccc
Q psy10063        485 SKDATMFITASKDHTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIF  562 (894)
Q Consensus       485 spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~  562 (894)
                      .+++..+.....+...++..     ......  ....+.+++|+|||++|+++......             |++|++..
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~-------------v~~~~~~~  176 (365)
T d1jofa_         115 YKFAGYGNVFSVSETGKLEK-----NVQNYEYQENTGIHGMVFDPTETYLYSADLTANK-------------LWTHRKLA  176 (365)
T ss_dssp             SSSCCEEEEEEECTTCCEEE-----EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-------------EEEEEECT
T ss_pred             cCCCCcceeEeeeecceecC-----cccCcccCCCCcceEEEECCCCCEEEEeeCCCCE-------------EEEEEccC
Confidence            77766554443333332221     111112  23458899999999999998754431             44444332


Q ss_pred             -cceE--EE--ccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCC
Q psy10063        563 -EEEF--AR--IKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNG  605 (894)
Q Consensus       563 -~~~~--~~--l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~  605 (894)
                       ++..  ..  ..........++|+|+|++++... .++.|.+|+++..
T Consensus       177 ~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         177 SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             CCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence             2211  11  122345789999999999876555 5788999998654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.26  E-value=9.1e-12  Score=136.23  Aligned_cols=192  Identities=10%  Similarity=-0.004  Sum_probs=125.9

Q ss_pred             ecCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecC-CCCCCeeEEEEcCCCCE--EEEEeCCCCccceEE
Q psy10063        406 TDQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISG-HAKEPINDMQFSKDATM--FITASHSQAVEPIND  481 (894)
Q Consensus       406 ~~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~-h~~~~V~~v~~spdg~~--la~~~~d~~i~~V~~  481 (894)
                      ..|.-.+.+..++|||++|++. ..+..|.+||++++++.+.+.- +.. .+..++|+|+|+.  ++..+.+.       
T Consensus        68 d~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~-gphgi~~spdg~t~YV~~~~~~~-------  139 (441)
T d1qnia2          68 DCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQ-AIHGLRLQKVPKTNYVFCNAEFV-------  139 (441)
T ss_dssp             CBCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCC-CEEEEEECCSSBCCEEEEEECSC-------
T ss_pred             cccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCC-CccceEEeccCCEEEEEeccCCc-------
Confidence            3466677778889999999765 4678999999999999887764 333 7888999988874  33333221       


Q ss_pred             EEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc--Ccc---------
Q psy10063        482 MQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTS--TKV---------  550 (894)
Q Consensus       482 l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~--~~~---------  550 (894)
                      +.+..++..+..-.....+..+|..+.+....+...+.+..++|+|+|+++++.+......++...  ...         
T Consensus       140 v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~  219 (441)
T d1qnia2         140 IPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV  219 (441)
T ss_dssp             EESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEH
T ss_pred             ccccCcccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCc
Confidence            112122221100000124667899999998888877889999999999999998865432111100  000         


Q ss_pred             ---------c-------eeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEE-EEeCCCcEEEEECCCCc
Q psy10063        551 ---------G-------KFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYA-SGGEDGFLISNTLSNGL  606 (894)
Q Consensus       551 ---------~-------~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~-sgs~Dg~I~vwdl~~~~  606 (894)
                               +       .-.+.+++....+.++.+..... ...+.++|||++|+ ++..++.|.|||+++.+
T Consensus       220 p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~  291 (441)
T d1qnia2         220 ERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLD  291 (441)
T ss_dssp             HHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHH
T ss_pred             cceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhh
Confidence                     0       01144555555556666665544 57899999999865 45678999999987543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.23  E-value=4.7e-09  Score=107.73  Aligned_cols=91  Identities=8%  Similarity=-0.080  Sum_probs=60.5

Q ss_pred             eEEEeeCCCCCEEEEecCCC-c--EEEEEccCCceee-ccccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCccee
Q psy10063        763 GFKMPEPPKREKLALALADK-V--SERYRDRKNKATA-GFLLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEEF  838 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg-~--I~iwd~~~~~~~~-~~~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~l  838 (894)
                      .....++|++++|+..+.++ .  |.+++........ ..........|||||++|+..+..+ +...|++|++..++ .
T Consensus       173 ~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~-~~~~l~~~~~dg~~-~  250 (269)
T d2hqsa1         173 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG-MGSVLNLVSTDGRF-K  250 (269)
T ss_dssp             EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEET-TEEEEEEEETTSCC-E
T ss_pred             ccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcCC-CCcEEEEEECCCCC-E
Confidence            44567788888887665544 3  4444544443322 2222334568999999998876553 44579999998655 4


Q ss_pred             eeccCCCCCeeEEEEee
Q psy10063        839 ARIKGHFGPINSLAFHP  855 (894)
Q Consensus       839 ~~l~gH~~~V~~l~fSp  855 (894)
                      ..|....+.+...+|||
T Consensus       251 ~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         251 ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             EECCCSSSEEEEEEECC
T ss_pred             EEEeCCCCcEEeEEeCC
Confidence            55767778888999998

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=3e-09  Score=109.32  Aligned_cols=203  Identities=9%  Similarity=0.016  Sum_probs=134.5

Q ss_pred             EEecCCCCEEEEEEccCCCEEEEecCC---CcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc----
Q psy10063        404 QVTDQSAKITSLLWGNLDQYIITGHAK---GDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV----  476 (894)
Q Consensus       404 ~l~~H~~~V~~l~~spdg~~L~sgs~D---g~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i----  476 (894)
                      .+..+...+.+.+|||||++||....+   ..+.+.+...+... .+..+.. .+....|+|+|+.|+........    
T Consensus        33 ~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~spdg~~i~~~~~~~~~~~~~  110 (269)
T d2hqsa1          33 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLY  110 (269)
T ss_dssp             EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             EEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeec-ccccceecCCCCeeeEeeecCCcccee
Confidence            344567788999999999999976443   34777777766644 3444555 78899999999999877654322    


Q ss_pred             ----------------cceEEEEEecCCCEEEEEE-CCCC--EEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        477 ----------------EPINDMQFSKDATMFITAS-KDHT--AKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       477 ----------------~~V~~l~~spdg~~L~sgs-~Dg~--V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                                      .......+++++..++..+ .+|.  |.++++..+................|+|+|+.|+....
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~  190 (269)
T d2hqsa1         111 VMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS  190 (269)
T ss_dssp             EEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred             ecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEEEee
Confidence                            2334455677666555544 4454  45556666555544445567788899999999998877


Q ss_pred             CCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCC---CcEEEEECCCCcccc---CC
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGED---GFLISNTLSNGLDIS---EG  611 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D---g~I~vwdl~~~~~~~---~~  611 (894)
                      ++..           +.+.+.+...+.. . +..+........|+|||++|+..+..   ..|++|+++.+....   ..
T Consensus       191 ~~~~-----------~~i~~~~~~~~~~-~-~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~  257 (269)
T d2hqsa1         191 NGGQ-----------QHIAKQDLATGGV-Q-VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATD  257 (269)
T ss_dssp             CSSC-----------EEEEEEETTTCCE-E-ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSS
T ss_pred             cCCc-----------eeeeEeecccccc-e-EeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCC
Confidence            6643           2366667665543 2 33455667889999999998866543   468899998775332   22


Q ss_pred             CceeeeEECc
Q psy10063        612 SFTSSSTQQP  621 (894)
Q Consensus       612 ~~v~~~~~sp  621 (894)
                      ..+...+|+|
T Consensus       258 g~~~~p~WSP  267 (269)
T d2hqsa1         258 GQVKFPAWSP  267 (269)
T ss_dssp             SEEEEEEECC
T ss_pred             CcEEeEEeCC
Confidence            3344556665

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.7e-08  Score=112.70  Aligned_cols=156  Identities=13%  Similarity=0.129  Sum_probs=92.7

Q ss_pred             EEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC--CCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        416 LWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK--EPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       416 ~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~--~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      .|.+++.+++. ..+|.|.+||+.+++....+..+.-  ..+....|||||++|+.......   +    |.        
T Consensus        23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~---~----~r--------   86 (465)
T d1xfda1          23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP---I----YQ--------   86 (465)
T ss_dssp             CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC---C----SS--------
T ss_pred             EEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccc---e----eE--------
Confidence            57777776654 4567899999998876544443221  13444555555555444332111   0    00        


Q ss_pred             EECCCCEEEEEcCCCcEEEEEeC---CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEcc
Q psy10063        494 ASKDHTAKLFTTHDRQLLKTYTT---ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIK  570 (894)
Q Consensus       494 gs~Dg~V~iwdl~~~~~~~~~~~---~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~  570 (894)
                      -+..+.+.|||+.++........   ...+....|||||++|+......               |.+.+...+..++...
T Consensus        87 ~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~n---------------l~~~~~~~~~~~~lt~  151 (465)
T d1xfda1          87 HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENN---------------IYYCAHVGKQAIRVVS  151 (465)
T ss_dssp             SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTE---------------EEEESSSSSCCEEEEC
T ss_pred             eeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEecce---------------EEEEecCCCceEEEec
Confidence            02356789999998876554332   34566789999999999887543               4444444443333221


Q ss_pred             -CCC-----------------CCeEEEEEecCCCEEEEEeC-CCcEEEEEC
Q psy10063        571 -GHF-----------------GPINSLAFHPDGKSYASGGE-DGFLISNTL  602 (894)
Q Consensus       571 -~h~-----------------~~V~~l~~spdg~~l~sgs~-Dg~I~vwdl  602 (894)
                       +..                 +.-..+.|||||++||.... +..|..|.+
T Consensus       152 ~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~  202 (465)
T d1xfda1         152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL  202 (465)
T ss_dssp             CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred             ccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeec
Confidence             111                 11257789999999998753 344555554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.92  E-value=5.8e-07  Score=93.87  Aligned_cols=112  Identities=13%  Similarity=0.049  Sum_probs=79.4

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARF  557 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~v  557 (894)
                      .+..++++|||+++++...++.|+.||.. ++..........+.+++|+++|+++++....+.+.              +
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~--------------~   93 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIP--------------V   93 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCE--------------E
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEE--------------E
Confidence            47788889999988888888888888744 55555566678899999999999888877777643              3


Q ss_pred             Eeccc--cceEEEc-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        558 YHLIF--EEEFARI-KGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       558 wd~~~--~~~~~~l-~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      |+...  +...... .........+++.++|+++++.+.++.+..++...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~  143 (302)
T d2p4oa1          94 VSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ  143 (302)
T ss_dssp             EEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred             EEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccC
Confidence            33221  1111111 12345678899999998888877788777777654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.89  E-value=1.6e-07  Score=96.05  Aligned_cols=155  Identities=8%  Similarity=0.015  Sum_probs=90.7

Q ss_pred             CCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        410 AKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      ..-.+|+++++|.+.++. +..+.|..++...............                         ....|+++++|
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------------------------~p~gvav~~~g   68 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY-------------------------QPQGLAVDGAG   68 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCC-------------------------SCCCEEECTTC
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCcc-------------------------CceEEEEcCCC
Confidence            445899999999965554 4556677666543322111111111                         34567777888


Q ss_pred             CEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEE
Q psy10063        489 TMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFAR  568 (894)
Q Consensus       489 ~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~  568 (894)
                      .++++....+.|++++...++.+..+.......+|++.++|++++.-.....              +.+++.........
T Consensus        69 ~i~v~d~~~~~i~~~~~~~~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~~~--------------~~~~~~~~~~~~~~  134 (260)
T d1rwia_          69 TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR--------------VVKLAAGSKTQTVL  134 (260)
T ss_dssp             CEEEEETTTEEEEECTTCSCCEECCCCSCCSEEEEEECTTCCEEEEEGGGTE--------------EEEECTTCSSCEEC
T ss_pred             CEEEeeeeeceeeeeeeccceeeeeeeeeeecccccccccceeEeecccccc--------------ccccccccceeeee
Confidence            7766666666666665555555544444567899999999986665433332              34444433222221


Q ss_pred             ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        569 IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       569 l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      ...-.....+|+++++|+++++...++.|..++.+
T Consensus       135 ~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~  169 (260)
T d1rwia_         135 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE  169 (260)
T ss_dssp             CCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred             eecccCCcceeeecCCCCEeeeccccccccccccc
Confidence            12223455788888888877777777777777654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.83  E-value=6e-07  Score=94.35  Aligned_cols=105  Identities=13%  Similarity=0.066  Sum_probs=63.8

Q ss_pred             CCEEEEEEccCCCEEEEecC-------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEE
Q psy10063        410 AKITSLLWGNLDQYIITGHA-------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDM  482 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~-------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l  482 (894)
                      ...-.++|.++|+++++...       ++.|..||..+++.......... ..                    ...-..|
T Consensus        18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~-~~--------------------~g~P~Gl   76 (314)
T d1pjxa_          18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVN-GY--------------------GGIPAGC   76 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEET-TE--------------------ECCEEEE
T ss_pred             CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccc-cC--------------------CCcceeE
Confidence            34567899999997776432       46688888887765433322111 00                    0034567


Q ss_pred             EEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC-CC----CeeEEEEcCCCCEEEEE
Q psy10063        483 QFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT-ER----PVNSAALSPILPHVVLG  535 (894)
Q Consensus       483 ~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~-~~----~v~~l~~spdg~~l~~~  535 (894)
                      +|.++|.+|+++...+.|.++|...+........ .+    ....++|.++|.+.++-
T Consensus        77 ~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd  134 (314)
T d1pjxa_          77 QCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITA  134 (314)
T ss_dssp             EECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEE
T ss_pred             EEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEec
Confidence            8888888777777666777778664432221111 11    35779999999766653

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.83  E-value=1.3e-06  Score=89.90  Aligned_cols=109  Identities=7%  Similarity=0.003  Sum_probs=71.5

Q ss_pred             eEEEeeCCCCCEEEEecCCCcEEEEEccCCceeecc-----ccCCCceEeecCCCeEEEEecCCCCceeEEEeecCCcce
Q psy10063        763 GFKMPEPPKREKLALALADKVSERYRDRKNKATAGF-----LLSCPDFLFDFDTTREVTTTSTKVGKFDARFYHLIFEEE  837 (894)
Q Consensus       763 v~~la~spdg~~Latgs~Dg~I~iwd~~~~~~~~~~-----~~~~~~~~fS~dg~~l~~as~d~~g~~~I~vwd~~tg~~  837 (894)
                      ...+++.+++.++++....+.|++|+... +.+..+     ......+++.++|+.+++-....   ..|++|+. .|+.
T Consensus       159 ~~~i~~d~~g~i~v~d~~~~~V~~~d~~G-~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~---~~v~~f~~-~G~~  233 (279)
T d1q7fa_         159 PNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNN---FNLTIFTQ-DGQL  233 (279)
T ss_dssp             EEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS---CEEEEECT-TSCE
T ss_pred             cceeeeccceeEEeeeccccceeeeecCC-ceeeeecccccccCCcccccccCCeEEEEECCCC---cEEEEECC-CCCE
Confidence            44566667777777767777777777543 333322     12234678899998555433222   14899985 4887


Q ss_pred             eeeccC--CCCCeeEEEEeeCCcEEEEecCCCcEEEEecCcc
Q psy10063        838 FARIKG--HFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQA  877 (894)
Q Consensus       838 l~~l~g--H~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~  877 (894)
                      +..+..  .......|++.+||.++++ +.++.|++|++...
T Consensus       234 ~~~~~~~~~~~~p~~vav~~dG~l~V~-~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         234 ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL  274 (279)
T ss_dssp             EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             EEEEeCCCCCCCEeEEEEeCCCcEEEE-eCCCeEEEEEeeee
Confidence            766643  3346789999999986655 57899999998764

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.81  E-value=1.9e-07  Score=100.64  Aligned_cols=216  Identities=8%  Similarity=0.001  Sum_probs=126.2

Q ss_pred             eeeeeccCccEEEecCCCeEEEE-Ee-----------cCCCCEEEEEEccCCCE--EEEec-CCCcEEEEecCC------
Q psy10063        382 RLNSMSPAARKLATNAEPVVKMQ-VT-----------DQSAKITSLLWGNLDQY--IITGH-AKGDICTWDLRM------  440 (894)
Q Consensus       382 ~~~~~s~dg~~l~~~~~~~~~~~-l~-----------~H~~~V~~l~~spdg~~--L~sgs-~Dg~I~iWd~~t------  440 (894)
                      ..++|++|++.|.......+... +.           ........++++++++.  |+++. ..+.|..+.+..      
T Consensus        43 s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~  122 (365)
T d1jofa_          43 SWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGN  122 (365)
T ss_dssp             SEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEE
T ss_pred             CEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcce
Confidence            45788999998865544332221 11           12233445667888884  44432 234555554321      


Q ss_pred             -------CeE---EEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC-c-----------------------cceEEEEEec
Q psy10063        441 -------GRE---LESISGHAKEPINDMQFSKDATMFITASHSQA-V-----------------------EPINDMQFSK  486 (894)
Q Consensus       441 -------g~~---~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~-i-----------------------~~V~~l~~sp  486 (894)
                             ++.   ...........+.+++|+|||++|+++..... +                       ...+.++|+|
T Consensus       123 ~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~p  202 (365)
T d1jofa_         123 VFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP  202 (365)
T ss_dssp             EEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred             eEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECC
Confidence                   111   11111112225789999999999988864321 2                       3567799999


Q ss_pred             CCCEEEEEE-CCCCEEEEEcCCCcEEE--E---EeC---------------CCCeeEEEEcCCCCEEEEEECCCCeEEEe
Q psy10063        487 DATMFITAS-KDHTAKLFTTHDRQLLK--T---YTT---------------ERPVNSAALSPILPHVVLGGGQEAREVTT  545 (894)
Q Consensus       487 dg~~L~sgs-~Dg~V~iwdl~~~~~~~--~---~~~---------------~~~v~~l~~spdg~~l~~~~~~~~~~v~~  545 (894)
                      +|+++++.. .++.|.+|++..++...  .   +..               ......+.|+|||++|+++.....     
T Consensus       203 dg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~-----  277 (365)
T d1jofa_         203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK-----  277 (365)
T ss_dssp             TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS-----
T ss_pred             CCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCC-----
Confidence            999886655 57889999997654322  1   111               012467899999999988753211     


Q ss_pred             ccCccceeeEEEEeccccceE------EEccCCCCCeEEEEEec-CCCEEEEEe-CCCcEEEEECCCC
Q psy10063        546 TSTKVGKFDARFYHLIFEEEF------ARIKGHFGPINSLAFHP-DGKSYASGG-EDGFLISNTLSNG  605 (894)
Q Consensus       546 ~~~~~~~~~v~vwd~~~~~~~------~~l~~h~~~V~~l~~sp-dg~~l~sgs-~Dg~I~vwdl~~~  605 (894)
                         ......|..|++.....+      ...........+|+++| +|++|+++. .++.|.+|+++..
T Consensus       278 ---~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         278 ---FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             ---TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ---CccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence               001112444544332111      11122334567899998 799887764 6788999987653

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.79  E-value=3e-07  Score=96.10  Aligned_cols=198  Identities=11%  Similarity=0.060  Sum_probs=130.0

Q ss_pred             CEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------
Q psy10063        411 KITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--------------  476 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------------  476 (894)
                      .+..++++|||+++++...++.|+.|+.. |+. ..+..... .+.+++|++||+++++...++.+              
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~-~~~~~~~~-~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~  105 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GNQ-QIHATVEG-KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  105 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEEECSS-EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCE-EEEEcCCC-CcceEEEcCCCCeEEEecCCceEEEEEecccccceee
Confidence            57889999999999998889988888855 443 33333444 78999999999988877655543              


Q ss_pred             -------cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeC---------C--CCeeEEEEcCCCCEEEEEECC
Q psy10063        477 -------EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTT---------E--RPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       477 -------~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~---------~--~~v~~l~~spdg~~l~~~~~~  538 (894)
                             .....+++.++|+++++.+.++.|..+|...+.....+..         .  .....+++  ++.+|+++...
T Consensus       106 ~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~--~~~~l~~~~~~  183 (302)
T d2p4oa1         106 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR--FGNFLYVSNTE  183 (302)
T ss_dssp             EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--ETTEEEEEETT
T ss_pred             ccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccc--cCCceeeecCC
Confidence                   3466788999999888888888898899887765443331         1  12345555  45666666555


Q ss_pred             CCeEEEeccCccceeeEEEEeccccceEEE--ccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccc-c----CC
Q psy10063        539 EAREVTTTSTKVGKFDARFYHLIFEEEFAR--IKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDI-S----EG  611 (894)
Q Consensus       539 ~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~-~----~~  611 (894)
                      ...             |+.+++........  ...+......|+|+++|.++++...++.|.+|+.+..... .    ..
T Consensus       184 ~~~-------------i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~  250 (302)
T d2p4oa1         184 KML-------------LLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGV  250 (302)
T ss_dssp             TTE-------------EEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTC
T ss_pred             CCe-------------EEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCC
Confidence            432             44444433221111  1112334567999999998888888899999987654321 1    12


Q ss_pred             CceeeeEE---CcCCcEE
Q psy10063        612 SFTSSSTQ---QPDGLVY  626 (894)
Q Consensus       612 ~~v~~~~~---spdg~~l  626 (894)
                      .....++|   .+|++.+
T Consensus       251 ~~pt~vafg~~~~D~~~L  268 (302)
T d2p4oa1         251 IGSTAVAFGQTEGDCTAI  268 (302)
T ss_dssp             TTEEEEEECCSTTTTTEE
T ss_pred             CCceEEEEcCCCCCCCEE
Confidence            34556777   4455433

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.77  E-value=5e-07  Score=92.41  Aligned_cols=101  Identities=16%  Similarity=0.062  Sum_probs=70.7

Q ss_pred             EEecC--CCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEec
Q psy10063        483 QFSKD--ATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHL  560 (894)
Q Consensus       483 ~~spd--g~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~  560 (894)
                      .++||  |++||..+ +|.|.+.|+..++..+...+.+.+...+|||||++|+.....+.        .....+|.++++
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~--------~~~~~~i~~~~~   75 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGS--------SLNTADLYFYNG   75 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEEST--------TCCEEEEEEEET
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCC--------CCCceEEEEEEe
Confidence            35688  88888765 46788889999988776667788899999999999998754321        112234777777


Q ss_pred             cccceEEEcc------CCCCCeEEEEEecCCCEEEEEe
Q psy10063        561 IFEEEFARIK------GHFGPINSLAFHPDGKSYASGG  592 (894)
Q Consensus       561 ~~~~~~~~l~------~h~~~V~~l~~spdg~~l~sgs  592 (894)
                      ..++..+...      ........++|+|||+.|+...
T Consensus        76 ~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          76 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             cCCceEEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence            7666544221      1223456788999999887653

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.77  E-value=1.7e-06  Score=90.92  Aligned_cols=182  Identities=13%  Similarity=0.100  Sum_probs=119.1

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCC----c-------
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQA----V-------  476 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~----i-------  476 (894)
                      ....+-.++|.++|++.++-...+.|+.|+.+.++....+..... ....|+|++||+++++...+..    +       
T Consensus        38 ~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~-~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~  116 (319)
T d2dg1a1          38 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA-NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG  116 (319)
T ss_dssp             SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS-SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             CCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCC-CeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence            344557899999999777777888999999887766666555555 7889999999988776533211    1       


Q ss_pred             -------------cceEEEEEecCCCEEEEEECC------CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEEC
Q psy10063        477 -------------EPINDMQFSKDATMFITASKD------HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGG  537 (894)
Q Consensus       477 -------------~~V~~l~~spdg~~L~sgs~D------g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~  537 (894)
                                   ..+..+++.++|++.++....      +.|..++...+........-.....|+|++|++.|+++..
T Consensus       117 ~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~  196 (319)
T d2dg1a1         117 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET  196 (319)
T ss_dssp             CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred             ceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecc
Confidence                         246678899999866654321      2244444443333333333355688999999998877765


Q ss_pred             CCCeEEEeccCccceeeEEEEecccc-ceE-------EEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10063        538 QEAREVTTTSTKVGKFDARFYHLIFE-EEF-------ARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLS  603 (894)
Q Consensus       538 ~~~~~v~~~~~~~~~~~v~vwd~~~~-~~~-------~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~  603 (894)
                      ....             |+.|++... ...       ............|++..+|++.++....+.|.+|+-+
T Consensus       197 ~~~~-------------I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~  257 (319)
T d2dg1a1         197 TANR-------------LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR  257 (319)
T ss_dssp             GGTE-------------EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             cCCc-------------eEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCC
Confidence            4331             455554321 111       1111122335689999999988888889999999964

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.71  E-value=4.7e-06  Score=85.65  Aligned_cols=177  Identities=11%  Similarity=0.116  Sum_probs=115.5

Q ss_pred             EEEEEEccCCC-EEEE-ecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCC---------------
Q psy10063        412 ITSLLWGNLDQ-YIIT-GHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQ---------------  474 (894)
Q Consensus       412 V~~l~~spdg~-~L~s-gs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~---------------  474 (894)
                      -..+++..+.. +++. .+.++.|.+++. .|+.+..+..........+++.++|.+++......               
T Consensus        72 p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~  150 (279)
T d1q7fa_          72 PNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKF  150 (279)
T ss_dssp             EEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred             cccccccccccccceeccCCccccccccc-cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecc
Confidence            34455555433 3333 344567777775 46666666433332566777777776655543322               


Q ss_pred             ----CccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC---CCeeEEEEcCCCCEEEEEECCCCeEEEecc
Q psy10063        475 ----AVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE---RPVNSAALSPILPHVVLGGGQEAREVTTTS  547 (894)
Q Consensus       475 ----~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~---~~v~~l~~spdg~~l~~~~~~~~~~v~~~~  547 (894)
                          .......+++.++|.++++....+.|++||. +|+.+..+...   .....|++.++|+.+++-...+..      
T Consensus       151 g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~------  223 (279)
T d1q7fa_         151 GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN------  223 (279)
T ss_dssp             ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE------
T ss_pred             cccccccccceeeeccceeEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcE------
Confidence                2246678889999988888888899999996 46777777542   457899999999866554433321      


Q ss_pred             CccceeeEEEEeccccceEEEccC--CCCCeEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10063        548 TKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHPDGKSYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       548 ~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~  605 (894)
                             |.+|+. .|+.+..+..  .....+.|++.+||.++ .++.+..|++|+....
T Consensus       224 -------v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         224 -------LTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVV-LASKDYRLYIYRYVQL  274 (279)
T ss_dssp             -------EEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEE-EEETTTEEEEEECSCC
T ss_pred             -------EEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEeeee
Confidence                   556653 3665555432  33467899999999754 4567899999998654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.6e-06  Score=92.44  Aligned_cols=104  Identities=8%  Similarity=0.012  Sum_probs=63.8

Q ss_pred             CCEEEEEEccCCCEEEEec---------CCCcEEEEecCCCeEEEEecC--CCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        410 AKITSLLWGNLDQYIITGH---------AKGDICTWDLRMGRELESISG--HAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs---------~Dg~I~iWd~~tg~~~~~l~~--h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      ..+....|||||++|+.+.         ..+.+.|+|+.+++.......  ... .                        
T Consensus        61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~-~------------------------  115 (465)
T d1xfda1          61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNA-K------------------------  115 (465)
T ss_dssp             TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSC-C------------------------
T ss_pred             cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCcc-c------------------------
Confidence            4677889999999888763         356789999998875433222  122 2                        


Q ss_pred             eEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCC-------------------CCeeEEEEcCCCCEEEEEECCC
Q psy10063        479 INDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYTTE-------------------RPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       479 V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~-------------------~~v~~l~~spdg~~l~~~~~~~  539 (894)
                      +....|||||++||... ++.|.+.+...+..++....+                   +.-.++.|||||++|++...+.
T Consensus       116 l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~  194 (465)
T d1xfda1         116 LQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND  194 (465)
T ss_dssp             CSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred             cceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecc
Confidence            33344555555555543 445555555555444433211                   1125778999999999876543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.68  E-value=5.3e-06  Score=86.84  Aligned_cols=179  Identities=11%  Similarity=0.084  Sum_probs=118.1

Q ss_pred             EEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCC---CCeeEEEEcCCCCEEEEEeC----------------
Q psy10063        412 ITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAK---EPINDMQFSKDATMFITASH----------------  472 (894)
Q Consensus       412 V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~---~~V~~v~~spdg~~la~~~~----------------  472 (894)
                      -..|+|.++|.+|+++.....|.+++.+.+..........+   .....++|.++|.+.++-..                
T Consensus        73 P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~  152 (314)
T d1pjxa_          73 PAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF  152 (314)
T ss_dssp             EEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred             ceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCC
Confidence            45799999999888887777788899775543221111111   13567999999987765321                


Q ss_pred             --------CCCc-------cceEEEEEecCCC-----EEEEEECCCCEEEEEcCCCcEEE---EEe---C--CCCeeEEE
Q psy10063        473 --------SQAV-------EPINDMQFSKDAT-----MFITASKDHTAKLFTTHDRQLLK---TYT---T--ERPVNSAA  524 (894)
Q Consensus       473 --------d~~i-------~~V~~l~~spdg~-----~L~sgs~Dg~V~iwdl~~~~~~~---~~~---~--~~~v~~l~  524 (894)
                              ++.+       ..-..|+|++++.     ++++-+..+.|..||+.....+.   .+.   .  ....-.|+
T Consensus       153 G~v~~~~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGia  232 (314)
T d1pjxa_         153 GSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD  232 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred             ceEEEEeecCceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeE
Confidence                    2211       1223678888764     44445667888888876432221   111   1  12356799


Q ss_pred             EcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEE-EEEeCCCcEEEEECC
Q psy10063        525 LSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSY-ASGGEDGFLISNTLS  603 (894)
Q Consensus       525 ~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l-~sgs~Dg~I~vwdl~  603 (894)
                      +..+|..+++....+.              |.+||.+.++.+..+..+...+.+|+|.+|++.| ++.+..|.|..+++.
T Consensus       233 vD~~GnlyVa~~~~g~--------------I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         233 FDEDNNLLVANWGSSH--------------IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EBTTCCEEEEEETTTE--------------EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             EecCCcEEEEEcCCCE--------------EEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            9999987766666664              7888888777776666666788999999999754 555667888888775


Q ss_pred             C
Q psy10063        604 N  604 (894)
Q Consensus       604 ~  604 (894)
                      .
T Consensus       299 ~  299 (314)
T d1pjxa_         299 R  299 (314)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.67  E-value=5.8e-07  Score=91.91  Aligned_cols=188  Identities=10%  Similarity=-0.011  Sum_probs=100.6

Q ss_pred             EEEecCCCCEEEEEEccCCCEEEEecC----C--CcEEEEecCCCeEEEEecCC-----CCCCeeEEEEcCCCCEEEEEe
Q psy10063        403 MQVTDQSAKITSLLWGNLDQYIITGHA----K--GDICTWDLRMGRELESISGH-----AKEPINDMQFSKDATMFITAS  471 (894)
Q Consensus       403 ~~l~~H~~~V~~l~~spdg~~L~sgs~----D--g~I~iWd~~tg~~~~~l~~h-----~~~~V~~v~~spdg~~la~~~  471 (894)
                      ..|..+.+.+...+|||||++||....    +  ..|.++++..++..+.....     ....+..+.|+|||+.|+...
T Consensus        34 ~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          34 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence            467778889999999999999986532    1  24778888877765432211     011457789999999998865


Q ss_pred             CCCCccc-eE-------------------EEEEecCCCEEEEE-ECCC-----------CEEEEEcCCCcEEEEEeCCCC
Q psy10063        472 HSQAVEP-IN-------------------DMQFSKDATMFITA-SKDH-----------TAKLFTTHDRQLLKTYTTERP  519 (894)
Q Consensus       472 ~d~~i~~-V~-------------------~l~~spdg~~L~sg-s~Dg-----------~V~iwdl~~~~~~~~~~~~~~  519 (894)
                      ....... ..                   ...|.+++..++.. ..+.           ...++....+...........
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (281)
T d1k32a2         114 AMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTH  193 (281)
T ss_dssp             TTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSC
T ss_pred             ccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccc
Confidence            5432210 00                   11122222222221 1110           111111112222222222333


Q ss_pred             eeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy10063        520 VNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLIS  599 (894)
Q Consensus       520 v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~v  599 (894)
                      .....++++  .++.....           .+..+|.++|+..++.. .+..+. ......|+|||+.|+.. .++.|++
T Consensus       194 ~~~~~~~~~--~~~~~~~~-----------~~~~~l~~~d~~g~~~~-~lt~~~-~~~~~~~SpDG~~I~f~-~~~~l~~  257 (281)
T d1k32a2         194 VSSPVIVGH--RIYFITDI-----------DGFGQIYSTDLDGKDLR-KHTSFT-DYYPRHLNTDGRRILFS-KGGSIYI  257 (281)
T ss_dssp             CEEEEEETT--EEEEEECT-----------TSSCEEEEEETTSCSCE-ECCCCC-SSCEEEEEESSSCEEEE-ETTEEEE
T ss_pred             cceeeeecc--ccceeccc-----------ccccceEEEeCCCCceE-EeecCC-CcccccCcCCCCEEEEE-eCCEEEE
Confidence            344444443  22222211           12234778888766544 343222 22334689999988764 4688999


Q ss_pred             EECCCCc
Q psy10063        600 NTLSNGL  606 (894)
Q Consensus       600 wdl~~~~  606 (894)
                      +|+++++
T Consensus       258 ~d~~~g~  264 (281)
T d1k32a2         258 FNPDTEK  264 (281)
T ss_dssp             ECTTTCC
T ss_pred             EECCCCC
Confidence            9998775

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.63  E-value=6.4e-06  Score=86.41  Aligned_cols=97  Identities=10%  Similarity=0.035  Sum_probs=64.2

Q ss_pred             eEEEeeCCCCCEEE-EecCCCcEEEEEccCCce-ee---c----cc---cCCCceEeecCCCeEEEEecCCCCceeEEEe
Q psy10063        763 GFKMPEPPKREKLA-LALADKVSERYRDRKNKA-TA---G----FL---LSCPDFLFDFDTTREVTTTSTKVGKFDARFY  830 (894)
Q Consensus       763 v~~la~spdg~~La-tgs~Dg~I~iwd~~~~~~-~~---~----~~---~~~~~~~fS~dg~~l~~as~d~~g~~~I~vw  830 (894)
                      ...|+|+||++.|. +-+..+.|+.|++..... ..   .    ..   .....+++..+|...++..+.+    .|.+|
T Consensus       179 pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g----~V~~~  254 (319)
T d2dg1a1         179 ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG----RVLVF  254 (319)
T ss_dssp             EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT----EEEEE
T ss_pred             eeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCC----EEEEE
Confidence            35688899988664 446677888888653221 11   0    00   1123578889998666555544    59999


Q ss_pred             ecCCcceeeecc------CCCCCeeEEEEeeCCcEEEEec
Q psy10063        831 HLIFEEEFARIK------GHFGPINSLAFHPDGKSYASGG  864 (894)
Q Consensus       831 d~~tg~~l~~l~------gH~~~V~~l~fSpdg~~LaS~s  864 (894)
                      |- .|+++..+.      +|...+.+++|.+++..|+...
T Consensus       255 ~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         255 NK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             CT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred             CC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence            96 588877664      4555788999999887666644

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.61  E-value=7.1e-07  Score=90.95  Aligned_cols=177  Identities=7%  Similarity=0.008  Sum_probs=116.3

Q ss_pred             CCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc-------------
Q psy10063        410 AKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV-------------  476 (894)
Q Consensus       410 ~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i-------------  476 (894)
                      .....|+++++|+++++....+.|++++-..++.+..+.+. . ...+|++.+++.+++.-.....+             
T Consensus        57 ~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~~~-~-~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~  134 (260)
T d1rwia_          57 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL-N-YPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL  134 (260)
T ss_dssp             CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSC-C-SEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEEC
T ss_pred             cCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeeeee-e-ecccccccccceeEeeccccccccccccccceeeee
Confidence            34578899999998887777777777765555544333322 2 68899999999876654322212             


Q ss_pred             -----cceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcc
Q psy10063        477 -----EPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKV  550 (894)
Q Consensus       477 -----~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~  550 (894)
                           ....+|++.++|+++++...++.|..+|.......... ..-.....|++.++|.++++....+.          
T Consensus       135 ~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~----------  204 (260)
T d1rwia_         135 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ----------  204 (260)
T ss_dssp             CCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTE----------
T ss_pred             eecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCE----------
Confidence                 35578999999998888888888999987755443322 23466789999999976555544443          


Q ss_pred             ceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10063        551 GKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTL  602 (894)
Q Consensus       551 ~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl  602 (894)
                          |..++...................|+++++|.++++-..++.|+.++.
T Consensus       205 ----i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         205 ----VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             ----EEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             ----EEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence                444444322222111223346789999999987777666666665543

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.10  E-value=0.00037  Score=74.15  Aligned_cols=122  Identities=11%  Similarity=0.125  Sum_probs=73.2

Q ss_pred             CEEEEEEccCCCEEEEecCCC-----------cEEEEecCCCeEEEE--ec-CCCCCCeeEEEEcCCCCEEEEEeCCCCc
Q psy10063        411 KITSLLWGNLDQYIITGHAKG-----------DICTWDLRMGRELES--IS-GHAKEPINDMQFSKDATMFITASHSQAV  476 (894)
Q Consensus       411 ~V~~l~~spdg~~L~sgs~Dg-----------~I~iWd~~tg~~~~~--l~-~h~~~~V~~v~~spdg~~la~~~~d~~i  476 (894)
                      .+...+...+|++++.|+.+.           .+.|||+.+++....  +. .|..                        
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~------------------------   76 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM------------------------   76 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC------------------------
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCccc------------------------
Confidence            334444556777777776421           377899988764321  11 1211                        


Q ss_pred             cceEEEEEecCCCEEEEEECC-CCEEEEEcCCCcEEEEEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCcccee
Q psy10063        477 EPINDMQFSKDATMFITASKD-HTAKLFTTHDRQLLKTYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKF  553 (894)
Q Consensus       477 ~~V~~l~~spdg~~L~sgs~D-g~V~iwdl~~~~~~~~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~  553 (894)
                       ....+++.++|++++.|+.+ ..+.+||..+.+....-.  ......+++..+||+.+++++.....        ...-
T Consensus        77 -~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~--------~~~~  147 (387)
T d1k3ia3          77 -FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGG--------VFEK  147 (387)
T ss_dssp             -SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSS--------SCCC
T ss_pred             -ceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccc--------cccc
Confidence             22344566778877777655 579999998876654222  22344677888899998888764421        1111


Q ss_pred             eEEEEeccccce
Q psy10063        554 DARFYHLIFEEE  565 (894)
Q Consensus       554 ~v~vwd~~~~~~  565 (894)
                      ++.+||....+.
T Consensus       148 ~v~~yd~~~~~W  159 (387)
T d1k3ia3         148 NGEVYSPSSKTW  159 (387)
T ss_dssp             CEEEEETTTTEE
T ss_pred             eeeeecCCCCce
Confidence            367777776543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.06  E-value=0.00059  Score=69.94  Aligned_cols=175  Identities=12%  Similarity=0.082  Sum_probs=112.0

Q ss_pred             EEEEEccCCCEE-EEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc---------------
Q psy10063        413 TSLLWGNLDQYI-ITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV---------------  476 (894)
Q Consensus       413 ~~l~~spdg~~L-~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i---------------  476 (894)
                      -+..|++....| .+--..+.|..||.++++.. .+.. .. .+.++++.++|.+++.. .++.+               
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~~-~~-~~~~i~~~~dg~l~va~-~~gl~~~d~~tg~~~~l~~~   96 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PF-MGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAEL   96 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SS-CEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECS
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEEC-CC-CcEEEEEecCCCEEEEE-eCccEEeecccceeeEEeee
Confidence            345677644434 34345677888888877643 3322 22 67788888887666543 32211               


Q ss_pred             ------cceEEEEEecCCCEEEEEEC----CCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        477 ------EPINDMQFSKDATMFITASK----DHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       477 ------~~V~~l~~spdg~~L~sgs~----Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                            ..+..+.+.++|++.++...    .+.-.+|.+..++....+..-.....++|+++++.|+++......     
T Consensus        97 ~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~-----  171 (295)
T d2ghsa1          97 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR-----  171 (295)
T ss_dssp             STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE-----
T ss_pred             ecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccce-----
Confidence                  24677888888886665432    235577877788776666555667899999999988887765542     


Q ss_pred             cCccceeeEEEEeccc------c--ceEEEccCCCCCeEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        547 STKVGKFDARFYHLIF------E--EEFARIKGHFGPINSLAFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~------~--~~~~~l~~h~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                              |..|++..      +  .....+.+..+....+++..+|.+.++.-..+.|.+|+.+.
T Consensus       172 --------I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G  229 (295)
T d2ghsa1         172 --------LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG  229 (295)
T ss_dssp             --------EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC
T ss_pred             --------eeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCCC
Confidence                    33443321      1  11223344556678899999999877777778899998643

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.87  E-value=0.00084  Score=71.24  Aligned_cols=93  Identities=13%  Similarity=0.034  Sum_probs=60.0

Q ss_pred             EEEEEcCCCcEEE--EEe--CCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccC-CCC
Q psy10063        500 AKLFTTHDRQLLK--TYT--TERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKG-HFG  574 (894)
Q Consensus       500 V~iwdl~~~~~~~--~~~--~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~-h~~  574 (894)
                      +.+||+.+++...  .+.  +.......++.++|++++.++.+..             .+.+||.........-.. ...
T Consensus        54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~-------------~~~~yd~~~~~w~~~~~~~~~r  120 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-------------KTSLYDSSSDSWIPGPDMQVAR  120 (387)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-------------CEEEEEGGGTEEEECCCCSSCC
T ss_pred             EEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCc-------------ceeEecCccCcccccccccccc
Confidence            6789999876543  222  2233456788999998888776543             278888877665432211 112


Q ss_pred             CeEEEEEecCCCEEEEEeCC------CcEEEEECCCC
Q psy10063        575 PINSLAFHPDGKSYASGGED------GFLISNTLSNG  605 (894)
Q Consensus       575 ~V~~l~~spdg~~l~sgs~D------g~I~vwdl~~~  605 (894)
                      .-.+++..+||++++.|+.+      ..+.+||....
T Consensus       121 ~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~  157 (387)
T d1k3ia3         121 GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK  157 (387)
T ss_dssp             SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred             cccceeeecCCceeeeccccccccccceeeeecCCCC
Confidence            23466777899998888753      24788887665

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.83  E-value=0.0027  Score=64.75  Aligned_cols=167  Identities=14%  Similarity=0.012  Sum_probs=111.0

Q ss_pred             CCCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCC---CCCeeEEEEcCCCCEEEEEeCCC----------
Q psy10063        408 QSAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHA---KEPINDMQFSKDATMFITASHSQ----------  474 (894)
Q Consensus       408 H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~---~~~V~~v~~spdg~~la~~~~d~----------  474 (894)
                      ....+.++++.++|++|+.. .+ .|.++|..+++.........   ...+..+.+.++|++.+......          
T Consensus        57 ~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~  134 (295)
T d2ghsa1          57 LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH  134 (295)
T ss_dssp             CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred             CCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEee
Confidence            34678999999999777654 44 58999999887654433211   12578899999998766543221          


Q ss_pred             ----Cc-------cceEEEEEecCCCEEEEE-ECCCCEEEEEcCC------CcEEEEEe---CCCCeeEEEEcCCCCEEE
Q psy10063        475 ----AV-------EPINDMQFSKDATMFITA-SKDHTAKLFTTHD------RQLLKTYT---TERPVNSAALSPILPHVV  533 (894)
Q Consensus       475 ----~i-------~~V~~l~~spdg~~L~sg-s~Dg~V~iwdl~~------~~~~~~~~---~~~~v~~l~~spdg~~l~  533 (894)
                          .+       ..-..++|+++++.|+.+ +..+.|..|++..      ++....+.   ..+....+++..+|.+.+
T Consensus       135 ~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWv  214 (295)
T d2ghsa1         135 VAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN  214 (295)
T ss_dssp             EETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred             ecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEe
Confidence                11       244678899999866554 5567888888742      11222222   235578899999998666


Q ss_pred             EEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEe-cCCCEEEEE
Q psy10063        534 LGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFH-PDGKSYASG  591 (894)
Q Consensus       534 ~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~s-pdg~~l~sg  591 (894)
                      +.-..+.              |.+||. .|+.+..+.-....+++++|- +|.+.|+..
T Consensus       215 a~~~~g~--------------V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         215 ARWGEGA--------------VDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             EEETTTE--------------EEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             eeeCCCc--------------eEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            6555554              777884 477787776666679999996 566655443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.61  E-value=0.0014  Score=73.70  Aligned_cols=67  Identities=10%  Similarity=-0.011  Sum_probs=48.7

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|.-+|+.+|+.+-+...- .+..+=.++-.+.+|+.++.||.++-+|.+.++.+.+++++..+...|
T Consensus       445 ~l~AiD~~TG~~~W~~~~~-~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P  511 (571)
T d2ad6a1         445 QIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP  511 (571)
T ss_dssp             EEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             cEEEeccCCCceeeEcCCC-CCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecc
Confidence            5888999999887554321 111111223346678889999999999999999999999888777655

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.60  E-value=0.0036  Score=70.29  Aligned_cols=67  Identities=10%  Similarity=0.034  Sum_probs=50.5

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|.-||+.+|+.+-+++... +...=.++-.|.+|+.|+.||.++.+|.++++.+.+|+++..+...|
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P  524 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP  524 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             cEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccC
Confidence            47889999998886654332 22222345578888899999999999999999999999887666554

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.57  E-value=0.0078  Score=67.66  Aligned_cols=67  Identities=15%  Similarity=0.119  Sum_probs=50.4

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|.-||+.+|+.+-+.. +..++.+-.++-.|.+|+.|+.||.++.+|.++++.+.+++++..+...|
T Consensus       454 ~l~A~D~~TG~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P  520 (596)
T d1w6sa_         454 QIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP  520 (596)
T ss_dssp             EEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eEEEEeCCCCceecccC-CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCC
Confidence            58889999998775433 22223333345567888889999999999999999999999887776655

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=0.022  Score=56.55  Aligned_cols=183  Identities=9%  Similarity=-0.027  Sum_probs=109.2

Q ss_pred             cCCCCEEEEEEccCCCEEEEe-cCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeC----------CCC
Q psy10063        407 DQSAKITSLLWGNLDQYIITG-HAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASH----------SQA  475 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sg-s~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~----------d~~  475 (894)
                      .+...|.+|+|....++|+.. ..++.|+..++..+.....+..... .+..|++..-+..|..+..          ++.
T Consensus        33 ~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~-~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~  111 (263)
T d1npea_          33 IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT  111 (263)
T ss_dssp             EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             cCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccc-cccEEEEeccCCeEEEeccCCCEEEEEecCCc
Confidence            344568889999877777765 4557788888876655444444333 6788888765555554432          221


Q ss_pred             c---------cceEEEEEecCCCEEEEEECC-CCEEEE--EcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeE
Q psy10063        476 V---------EPINDMQFSKDATMFITASKD-HTAKLF--TTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       476 i---------~~V~~l~~spdg~~L~sgs~D-g~V~iw--dl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                      .         .....|++.|...+|+..... +..+||  ++........... -....+|++.+.+++|+.+...... 
T Consensus       112 ~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~-  190 (263)
T d1npea_         112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-  190 (263)
T ss_dssp             SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-
T ss_pred             eEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCE-
Confidence            1         467788888876666654332 333455  4443332322322 3567899999999988887654431 


Q ss_pred             EEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        543 VTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       543 v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                                  |...++........+.+.. ...+|++.  +.+|+... ..+.|...+...++
T Consensus       191 ------------I~~~~~~g~~~~~v~~~~~-~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~  240 (263)
T d1npea_         191 ------------AECLNPAQPGRRKVLEGLQ-YPFAVTSY--GKNLYYTDWKTNSVIAMDLAISK  240 (263)
T ss_dssp             ------------EEEEETTEEEEEEEEECCC-SEEEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred             ------------EEEEECCCCCeEEEECCCC-CcEEEEEE--CCEEEEEECCCCEEEEEECCCCc
Confidence                        5566665433333333333 34577775  44555444 56778877876654

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.55  E-value=0.011  Score=66.06  Aligned_cols=166  Identities=14%  Similarity=0.080  Sum_probs=94.6

Q ss_pred             CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEE------
Q psy10063        421 DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITA------  494 (894)
Q Consensus       421 g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sg------  494 (894)
                      +..|+.+..|+.|.-.|..+|+++..+..+.......+.-.|                +     --++ .++.+      
T Consensus       117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p----------------~-----v~~~-~vivg~~~~~~  174 (560)
T d1kv9a2         117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAP----------------R-----VVKG-KVIIGNGGAEY  174 (560)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCC----------------E-----EETT-EEEECCBCTTT
T ss_pred             CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeee----------------e-----eecC-cccccccceec
Confidence            457888889999999999999998877643320100000000                0     0012 22222      


Q ss_pred             ECCCCEEEEEcCCCcEEEEEeCC-------------------------------CC-eeEEEEcCCCCEEEEEECCCCeE
Q psy10063        495 SKDHTAKLFTTHDRQLLKTYTTE-------------------------------RP-VNSAALSPILPHVVLGGGQEARE  542 (894)
Q Consensus       495 s~Dg~V~iwdl~~~~~~~~~~~~-------------------------------~~-v~~l~~spdg~~l~~~~~~~~~~  542 (894)
                      ...|.|+-+|+++|+++-.+...                               .. -..+++.++..+++.+.+.....
T Consensus       175 ~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~  254 (560)
T d1kv9a2         175 GVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPW  254 (560)
T ss_dssp             CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESS
T ss_pred             cccceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCccc
Confidence            12467999999999999887521                               01 12357778888877765543211


Q ss_pred             EEeccC---ccc--eeeEEEEeccccceEEEccCCCCCeEE---------EEEecCCC---EEEEEeCCCcEEEEECCCC
Q psy10063        543 VTTTST---KVG--KFDARFYHLIFEEEFARIKGHFGPINS---------LAFHPDGK---SYASGGEDGFLISNTLSNG  605 (894)
Q Consensus       543 v~~~~~---~~~--~~~v~vwd~~~~~~~~~l~~h~~~V~~---------l~~spdg~---~l~sgs~Dg~I~vwdl~~~  605 (894)
                      ......   ...  .-.|...|+++|+.+-.++.+.+.++.         +.+..+|+   .|+.+..+|.+.++|.+++
T Consensus       255 ~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG  334 (560)
T d1kv9a2         255 NREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG  334 (560)
T ss_dssp             CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred             ccccccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCC
Confidence            111000   000  112666788888876655433222221         22223443   5677888999999999888


Q ss_pred             ccc
Q psy10063        606 LDI  608 (894)
Q Consensus       606 ~~~  608 (894)
                      +.+
T Consensus       335 ~~i  337 (560)
T d1kv9a2         335 KLI  337 (560)
T ss_dssp             CEE
T ss_pred             ccc
Confidence            754

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.51  E-value=0.0026  Score=71.77  Aligned_cols=174  Identities=11%  Similarity=0.024  Sum_probs=100.7

Q ss_pred             EEEEEccC----CCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCC
Q psy10063        413 TSLLWGNL----DQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDA  488 (894)
Q Consensus       413 ~~l~~spd----g~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg  488 (894)
                      +.|++.++    +.+|+.+..|+.|.-.|.++|+++..+.......-..+.-+|                    .+  .+
T Consensus       109 RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P--------------------~v--~~  166 (596)
T d1w6sa_         109 RGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAP--------------------YV--VK  166 (596)
T ss_dssp             CCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCC--------------------EE--ET
T ss_pred             ceeEEecCCCCCceEEEEEeCCCCeEeeccccCceeccccccccccccccccCC--------------------cE--EC
Confidence            34555443    347889999999999999999998877532110000000000                    00  12


Q ss_pred             CEEEEEE------CCCCEEEEEcCCCcEEEEEeCC--------------------------------------C-CeeEE
Q psy10063        489 TMFITAS------KDHTAKLFTTHDRQLLKTYTTE--------------------------------------R-PVNSA  523 (894)
Q Consensus       489 ~~L~sgs------~Dg~V~iwdl~~~~~~~~~~~~--------------------------------------~-~v~~l  523 (894)
                      ..|+.+.      ..|.|+-+|+++|+++..+...                                      . .-..+
T Consensus       167 ~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~  246 (596)
T d1w6sa_         167 DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWY  246 (596)
T ss_dssp             TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCC
T ss_pred             CeEEEeeccccccccCceEEEECCCCcEEEEeeccCCccccccccccccccccccccccccccCCCCceecCCCcccccc
Confidence            2344432      3488999999999999876521                                      0 11345


Q ss_pred             EEcCCCCEEEEEECCCCeEEEeccCccc--eeeEEEEeccccceEEEccC--CCCC-------eEEEEE-ecCCC---EE
Q psy10063        524 ALSPILPHVVLGGGQEAREVTTTSTKVG--KFDARFYHLIFEEEFARIKG--HFGP-------INSLAF-HPDGK---SY  588 (894)
Q Consensus       524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~--~~~v~vwd~~~~~~~~~l~~--h~~~-------V~~l~~-spdg~---~l  588 (894)
                      ++.+...+++.+.+...-..........  .-.|...|+++|+.+-.++.  |...       +..+.+ ..+|+   .|
T Consensus       247 s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v  326 (596)
T d1w6sa_         247 AYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLL  326 (596)
T ss_dssp             EEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEE
T ss_pred             ccccCCCeeecccccccccccccccccccccccccccccccccccccccceeccccCCccccceeeeeccccccccccce
Confidence            6777788888876655421111111111  11367788999988765543  3211       111111 23443   57


Q ss_pred             EEEeCCCcEEEEECCCCccc
Q psy10063        589 ASGGEDGFLISNTLSNGLDI  608 (894)
Q Consensus       589 ~sgs~Dg~I~vwdl~~~~~~  608 (894)
                      +....+|.+.++|..+++.+
T Consensus       327 ~~~~k~G~~~vlDr~tG~~i  346 (596)
T d1w6sa_         327 THPDRNGIVYTLDRTDGALV  346 (596)
T ss_dssp             EEECTTSEEEEEETTTCCEE
T ss_pred             eccccccceeeecCCCCcee
Confidence            78889999999999888754

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.46  E-value=0.0033  Score=65.81  Aligned_cols=180  Identities=7%  Similarity=-0.044  Sum_probs=107.3

Q ss_pred             cCCCEEEEec-CCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcC--CCCEEEEEeCCCCccceEEEEEecCCCEEEE-E
Q psy10063        419 NLDQYIITGH-AKGDICTWDLRMGRELESISGHAKEPINDMQFSK--DATMFITASHSQAVEPINDMQFSKDATMFIT-A  494 (894)
Q Consensus       419 pdg~~L~sgs-~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~sp--dg~~la~~~~d~~i~~V~~l~~spdg~~L~s-g  494 (894)
                      +||+||+... .+..|.+-|++..++.+.+.---...+..++..+  .-.|++..+....       -+..||+.|-- .
T Consensus        97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~v-------P~pndg~~l~d~~  169 (459)
T d1fwxa2          97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDET-------PLVNDGTNMEDVA  169 (459)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCE-------ESSCSSSSTTCGG
T ss_pred             cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCcccc-------ccCCCCccccchh
Confidence            4899888875 5788999999999987766543333566666654  3445555544321       11122221100 0


Q ss_pred             ECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCC--eEEEeccCcccee-------------------
Q psy10063        495 SKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEA--REVTTTSTKVGKF-------------------  553 (894)
Q Consensus       495 s~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~--~~v~~~~~~~~~~-------------------  553 (894)
                      ...+.+.++|..+++....+...+....++++++|+++++.+....  +.+.........|                   
T Consensus       170 ~y~~~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~  249 (459)
T d1fwxa2         170 NYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ  249 (459)
T ss_dssp             -EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred             hcceEEEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcE
Confidence            0012366789999998888877778889999999999999885432  1111111111111                   


Q ss_pred             ---eEEEEecccc---ceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        554 ---DARFYHLIFE---EEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       554 ---~v~vwd~~~~---~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                         .+.+.|.+..   ..++.+.-. .....+.++|||++|++++ .+..|.|+|++.-+
T Consensus       250 eingV~VVD~~~~~~~~v~~yIPVp-KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~  308 (459)
T d1fwxa2         250 ELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFD  308 (459)
T ss_dssp             EETTEEEEECSGG--CSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHH
T ss_pred             EeCCceeecccccCCcceeEEEecC-CCCCceEECCCCCEEEEeCCcCCcEEEEEehhhh
Confidence               0334443321   112222111 2346789999999987766 58899999997543

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.44  E-value=0.0045  Score=64.76  Aligned_cols=188  Identities=9%  Similarity=0.004  Sum_probs=117.8

Q ss_pred             cCccEEEecCC--C-eEEEEEe----------cCCCCEEEEEEccCCC--EEEEecCCC------------------cEE
Q psy10063        388 PAARKLATNAE--P-VVKMQVT----------DQSAKITSLLWGNLDQ--YIITGHAKG------------------DIC  434 (894)
Q Consensus       388 ~dg~~l~~~~~--~-~~~~~l~----------~H~~~V~~l~~spdg~--~L~sgs~Dg------------------~I~  434 (894)
                      .|||+|.....  . +.++.|.          .....+..++..++++  |++.++.+.                  .+.
T Consensus        97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            38999876532  1 2222121          2446677777766554  777766532                  367


Q ss_pred             EEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCc--------------------------------------
Q psy10063        435 TWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAV--------------------------------------  476 (894)
Q Consensus       435 iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i--------------------------------------  476 (894)
                      ++|.++.+...++....  ....+++++||+++++.++....                                      
T Consensus       177 ~ID~~tm~V~~QV~V~g--~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV  254 (459)
T d1fwxa2         177 AVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV  254 (459)
T ss_dssp             EEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred             EEecCCceEEEEeeeCC--ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCc
Confidence            88999998877766433  56789999999999998764321                                      


Q ss_pred             --------------------cceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCc------------EEEEEeCCCCeeEE
Q psy10063        477 --------------------EPINDMQFSKDATMFITAS-KDHTAKLFTTHDRQ------------LLKTYTTERPVNSA  523 (894)
Q Consensus       477 --------------------~~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~------------~~~~~~~~~~v~~l  523 (894)
                                          +....+.++|||++|++++ .+..|.|+|+++..            .....+..-....-
T Consensus       255 ~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht  334 (459)
T d1fwxa2         255 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT  334 (459)
T ss_dssp             EEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEE
T ss_pred             eeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCcccc
Confidence                                2445778999999987765 57899999996421            12222334556778


Q ss_pred             EEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc----------ceEEEccCCCCCeEEE------EEecCCCE
Q psy10063        524 ALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE----------EEFARIKGHFGPINSL------AFHPDGKS  587 (894)
Q Consensus       524 ~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~----------~~~~~l~~h~~~V~~l------~~spdg~~  587 (894)
                      +|+.+|.-..+..-+..              |..|++...          ..+.++.-|-.. -.+      ...|||++
T Consensus       335 ~fd~~g~aytslfids~--------------v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~-gh~~~~~g~t~~~dgk~  399 (459)
T d1fwxa2         335 AFDGRGNAYTSLFLDSQ--------------VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP-GHLKTVMGETLDATNDW  399 (459)
T ss_dssp             EECTTSEEEEEETTTTE--------------EEEEEHHHHHHHHHTCSCCCEEEEEECSSCE-EEEEETTTTSTTCCSSE
T ss_pred             ccCCCceEEEEeeccce--------------EEEEecchhhhhhccccCCcceeccccccCC-CCCccCcCCcCCCCCCE
Confidence            88888744444445554              566665422          334455444331 122      23578999


Q ss_pred             EEEEe
Q psy10063        588 YASGG  592 (894)
Q Consensus       588 l~sgs  592 (894)
                      |++..
T Consensus       400 l~~~n  404 (459)
T d1fwxa2         400 LVCLS  404 (459)
T ss_dssp             EEEEE
T ss_pred             EEEec
Confidence            98875

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.27  E-value=0.015  Score=62.57  Aligned_cols=112  Identities=10%  Similarity=-0.008  Sum_probs=63.2

Q ss_pred             EEEEEecCCCEEEEEE-----CCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEecc--Cccce
Q psy10063        480 NDMQFSKDATMFITAS-----KDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTS--TKVGK  552 (894)
Q Consensus       480 ~~l~~spdg~~L~sgs-----~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~--~~~~~  552 (894)
                      ..++++||+++|+.+-     ....|+++|+.+|+.+...........++|++|++.|+....+..-......  .....
T Consensus       128 ~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~  207 (430)
T d1qfma1         128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH  207 (430)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred             cceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccCCc
Confidence            3455677777776532     2246999999999977533222233678999999999876644311000000  00111


Q ss_pred             eeEEEEeccccce--EEEccC--CCCCeEEEEEecCCCEEEEE
Q psy10063        553 FDARFYHLIFEEE--FARIKG--HFGPINSLAFHPDGKSYASG  591 (894)
Q Consensus       553 ~~v~vwd~~~~~~--~~~l~~--h~~~V~~l~~spdg~~l~sg  591 (894)
                      ..|+++.+.+...  +..+..  ....+..+..+.++++|+..
T Consensus       208 ~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred             ceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEE
Confidence            2366666554422  222332  23356677788999987644

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.26  E-value=0.0083  Score=66.96  Aligned_cols=67  Identities=10%  Similarity=0.090  Sum_probs=48.6

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|.-||+.+|+.+-++... .+..+-.++-.|.+|+.++.||.|+-+|.+.++.+.+++++..+..-|
T Consensus       439 ~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P  505 (560)
T d1kv9a2         439 ALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAP  505 (560)
T ss_dssp             EEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             ceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccC
Confidence            4778888888877554321 122222345567788889999999999999999999999877665444

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.21  E-value=0.067  Score=57.07  Aligned_cols=121  Identities=14%  Similarity=0.078  Sum_probs=64.6

Q ss_pred             cCCCCEEEEEEccCCCEEEEe-----cCCCcEEEEecCCCeEEEE-ecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceE
Q psy10063        407 DQSAKITSLLWGNLDQYIITG-----HAKGDICTWDLRMGRELES-ISGHAKEPINDMQFSKDATMFITASHSQAVEPIN  480 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sg-----s~Dg~I~iWd~~tg~~~~~-l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~  480 (894)
                      ++.-.+..+++|||+++|+.+     ++...|+|+|+.+|+.+.. +...   ....++|++|++.|+....+..-..  
T Consensus       122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~---~~~~~~W~~D~~~~~Y~~~~~~~~~--  196 (430)
T d1qfma1         122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV---KFSCMAWTHDGKGMFYNAYPQQDGK--  196 (430)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE---CSCCEEECTTSSEEEEEECCCCSSC--
T ss_pred             cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccc---cccceEEcCCCCEEEEEEeccccCc--
Confidence            344445677899999988854     2234699999999987642 2211   1124555555555443332211000  


Q ss_pred             EEEEecCCCEEEEEECCCCEEEEEcCCCcE--EEEEeC---CCCeeEEEEcCCCCEEEEEECC
Q psy10063        481 DMQFSKDATMFITASKDHTAKLFTTHDRQL--LKTYTT---ERPVNSAALSPILPHVVLGGGQ  538 (894)
Q Consensus       481 ~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~--~~~~~~---~~~v~~l~~spdg~~l~~~~~~  538 (894)
                           .++. .-.......|.+|.+.+...  +..+..   ...+..+..+.++++|++....
T Consensus       197 -----~~~~-~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~  253 (430)
T d1qfma1         197 -----SDGT-ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE  253 (430)
T ss_dssp             -----CSSS-CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred             -----cccc-ccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeec
Confidence                 0000 00001123577777766432  233332   1346677889999998865543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.14  E-value=0.11  Score=57.76  Aligned_cols=67  Identities=15%  Similarity=0.205  Sum_probs=51.7

Q ss_pred             eEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCcEEEEecCccccccccccCcccccCC
Q psy10063        826 DARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGFVRLHTFDQAYFDYTFDISEEFHCQP  893 (894)
Q Consensus       826 ~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~V~vWdl~~~~~~~~~~~~~~~~~qp  893 (894)
                      .|.-+|+.+|+.+-++..+. ++..-.++-.|.+|+.|+.||.++-+|.++++.+.+++++......|
T Consensus       467 ~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P  533 (582)
T d1flga_         467 SLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP  533 (582)
T ss_dssp             EEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             eEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccC
Confidence            47888999998886665432 23333355678888899999999999999999999999887766554

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.17  Score=49.78  Aligned_cols=101  Identities=8%  Similarity=-0.022  Sum_probs=65.2

Q ss_pred             ceEEEEEecCCCEEEEEE-CCCCEEEEEcCCCcEEEEEeCC-CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeE
Q psy10063        478 PINDMQFSKDATMFITAS-KDHTAKLFTTHDRQLLKTYTTE-RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDA  555 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs-~Dg~V~iwdl~~~~~~~~~~~~-~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v  555 (894)
                      .+..|+|....++|+-.. .++.|+..++..+.....+... ..+.+|++..-+..|+.+......             |
T Consensus        37 ~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~-------------I  103 (263)
T d1npea_          37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR-------------I  103 (263)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTE-------------E
T ss_pred             cEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCE-------------E
Confidence            466778887666666554 4567888888766555555433 678999999888888877665432             6


Q ss_pred             EEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE
Q psy10063        556 RFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG  591 (894)
Q Consensus       556 ~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg  591 (894)
                      .+.++........+......+..|+++|...+|+..
T Consensus       104 ~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t  139 (263)
T d1npea_         104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWT  139 (263)
T ss_dssp             EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred             EEEecCCceEEEEecccccCCcEEEEecccCcEEEe
Confidence            666665443322233334567888888876665544

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.17  Score=49.82  Aligned_cols=129  Identities=5%  Similarity=-0.054  Sum_probs=71.4

Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEE-CCCCEE
Q psy10063        423 YIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITAS-KDHTAK  501 (894)
Q Consensus       423 ~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs-~Dg~V~  501 (894)
                      +|+.+... .|+..+++.......+.. ..                         .+..|+|....++|+-.. .++.|+
T Consensus         3 fLl~s~~~-~I~~~~l~~~~~~~~~~~-~~-------------------------~~~~id~d~~~~~lYw~D~~~~~I~   55 (266)
T d1ijqa1           3 YLFFTNRH-EVRKMTLDRSEYTSLIPN-LR-------------------------NVVALDTEVASNRIYWSDLSQRMIC   55 (266)
T ss_dssp             EEEEECBS-SEEEEETTSCCCEEEECS-CS-------------------------SEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             EEEEECCC-eEEEEECCCCcceeeeCC-CC-------------------------ceEEEEEEeCCCEEEEEECCCCEEE
Confidence            44555433 588888876554433332 22                         345556665555554443 334454


Q ss_pred             EEEcCCC----cEEEEEeC-CCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe
Q psy10063        502 LFTTHDR----QLLKTYTT-ERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI  576 (894)
Q Consensus       502 iwdl~~~----~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V  576 (894)
                      ..++...    .....+.. -..+.+|++.+.++.|+.+......             |.+.++........+.......
T Consensus        56 ~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~-------------I~v~~~~g~~~~~~~~~~~~~P  122 (266)
T d1ijqa1          56 STQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT-------------VSVADTKGVKRKTLFRENGSKP  122 (266)
T ss_dssp             EEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE-------------EEEEETTSSSEEEEEECTTCCE
T ss_pred             EEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCE-------------EEeEecCCceEEEEEcCCCCCc
Confidence            4444321    11122222 3567789999888888887665542             6677766554444444455567


Q ss_pred             EEEEEecCCCEEEEE
Q psy10063        577 NSLAFHPDGKSYASG  591 (894)
Q Consensus       577 ~~l~~spdg~~l~sg  591 (894)
                      ..|+++|...+|+..
T Consensus       123 ~~l~vd~~~g~ly~~  137 (266)
T d1ijqa1         123 RAIVVDPVHGFMYWT  137 (266)
T ss_dssp             EEEEEETTTTEEEEE
T ss_pred             ceEEEEcccCeEEEe
Confidence            788888765555544

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.32  E-value=0.091  Score=53.93  Aligned_cols=118  Identities=12%  Similarity=0.119  Sum_probs=72.8

Q ss_pred             ceEEEEE--ec-CCC-EEEEEECCCCEEEEEcC---CC----cEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEec
Q psy10063        478 PINDMQF--SK-DAT-MFITASKDHTAKLFTTH---DR----QLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTT  546 (894)
Q Consensus       478 ~V~~l~~--sp-dg~-~L~sgs~Dg~V~iwdl~---~~----~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~  546 (894)
                      .++.+|+  ++ +|. +++....+|.+..|.+.   .+    ++++.|.....+..|++......|+++-.+..++.+..
T Consensus       129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a  208 (353)
T d1h6la_         129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYIAEEDEAIWKFSA  208 (353)
T ss_dssp             SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEES
T ss_pred             cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEEEecCccceEEEEe
Confidence            4667777  55 354 45666678988888763   33    45667777889999999999999999987665322211


Q ss_pred             cCccceeeEEEEeccccceEEEccC--CCCCeEEEEEec--CCC-EEE-EEeCCCcEEEEECCC
Q psy10063        547 STKVGKFDARFYHLIFEEEFARIKG--HFGPINSLAFHP--DGK-SYA-SGGEDGFLISNTLSN  604 (894)
Q Consensus       547 ~~~~~~~~v~vwd~~~~~~~~~l~~--h~~~V~~l~~sp--dg~-~l~-sgs~Dg~I~vwdl~~  604 (894)
                      +.....         .+..+....+  ..+.+..|++-.  ++. ||+ |.-.+....|||...
T Consensus       209 ~~~~~~---------~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~  263 (353)
T d1h6la_         209 EPDGGS---------NGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG  263 (353)
T ss_dssp             STTSCS---------CCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             ccCCCc---------cceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence            111110         1122222222  456788887653  333 444 444578899999865

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.25  E-value=0.38  Score=51.21  Aligned_cols=58  Identities=9%  Similarity=0.166  Sum_probs=42.1

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEEe---------CCCCeeEEEEcCC---CCEEEEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTYT---------TERPVNSAALSPI---LPHVVLG  535 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~---------~~~~v~~l~~spd---g~~l~~~  535 (894)
                      .-++|+|.|||++|++--..|.|++++..+++......         .+.....|+|+|+   ..+|++.
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvs   97 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEE
Confidence            67899999999887776457999999888776554332         1356789999985   4455553

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.19  E-value=0.038  Score=61.55  Aligned_cols=80  Identities=14%  Similarity=0.112  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCe-
Q psy10063        498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPI-  576 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V-  576 (894)
                      |.|.-||+.+|+.+..++...+...-.++-.|.+|+++..++.              ++.+|.++|+.+-++.-..+.. 
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~--------------l~A~Da~TGe~LW~~~~~~~~~~  522 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGR--------------LVAYHAATGEKLWEAPTGTGVVA  522 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE--------------EEEEETTTCCEEEEEECSSCCCS
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCe--------------EEEEECCCCcEeEEEECCCCccc
Confidence            4688899999999988876555444445557888888888875              8899999999987764322211 


Q ss_pred             EEEEEecCCC-EEEEE
Q psy10063        577 NSLAFHPDGK-SYASG  591 (894)
Q Consensus       577 ~~l~~spdg~-~l~sg  591 (894)
                      .-+.|..||+ ||+..
T Consensus       523 ~P~ty~~~GkQYv~v~  538 (573)
T d1kb0a2         523 APSTYMVDGRQYVSVA  538 (573)
T ss_dssp             CCEEEEETTEEEEEEE
T ss_pred             cCEEEEECCEEEEEEE
Confidence            1144566887 44433

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.08  E-value=0.058  Score=59.91  Aligned_cols=179  Identities=9%  Similarity=0.011  Sum_probs=102.8

Q ss_pred             EEEccCCCEEEEecC----------------CCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccc
Q psy10063        415 LLWGNLDQYIITGHA----------------KGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEP  478 (894)
Q Consensus       415 l~~spdg~~L~sgs~----------------Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~  478 (894)
                      +++.++..+++.+..                ...|.-.|+++|+.+-.++.+.. .++.+... .              .
T Consensus       240 ~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~-D~Wd~D~~-~--------------~  303 (571)
T d2ad6a1         240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH-DEWDFAGV-N--------------Q  303 (571)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT-CSSCCCCC-C--------------C
T ss_pred             cccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCc-cccccccc-c--------------c
Confidence            456677666665543                23577788999998877775443 33322110 0              1


Q ss_pred             eEEEEEecCCC---EEEEEECCCCEEEEEcCCCcEEEEEeCC--------------------------------------
Q psy10063        479 INDMQFSKDAT---MFITASKDHTAKLFTTHDRQLLKTYTTE--------------------------------------  517 (894)
Q Consensus       479 V~~l~~spdg~---~L~sgs~Dg~V~iwdl~~~~~~~~~~~~--------------------------------------  517 (894)
                      ...+.+..+|+   .++.++.+|.++++|.++|+++...+..                                      
T Consensus       304 ~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~  383 (571)
T d2ad6a1         304 MVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAM  383 (571)
T ss_dssp             CEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTT
T ss_pred             cceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccc
Confidence            11111222333   4566778888888888888876543211                                      


Q ss_pred             --CCeeEEEEcCCCCEEEEEECCCCeEEEeccCc-----------------------cceeeEEEEeccccceEEEccCC
Q psy10063        518 --RPVNSAALSPILPHVVLGGGQEAREVTTTSTK-----------------------VGKFDARFYHLIFEEEFARIKGH  572 (894)
Q Consensus       518 --~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~-----------------------~~~~~v~vwd~~~~~~~~~l~~h  572 (894)
                        ..-...+|+|+...+++...+....+......                       ...-.|.-+|+.+|+.+-+...-
T Consensus       384 Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~  463 (571)
T d2ad6a1         384 GFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK  463 (571)
T ss_dssp             CSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES
T ss_pred             cccccccceECCCCceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCC
Confidence              00023678888888887665543222211100                       00113778888888877654321


Q ss_pred             CCCeEEEEEecCCCEEEEEeCCCcEEEEECCCCccccC
Q psy10063        573 FGPINSLAFHPDGKSYASGGEDGFLISNTLSNGLDISE  610 (894)
Q Consensus       573 ~~~V~~l~~spdg~~l~sgs~Dg~I~vwdl~~~~~~~~  610 (894)
                      . ...+-.+.-.+.+|+.|+.||.++.+|.++++.+++
T Consensus       464 ~-~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~  500 (571)
T d2ad6a1         464 F-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN  500 (571)
T ss_dssp             S-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             C-CCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEE
Confidence            1 111112223466788899999999999999997753

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.04  E-value=0.81  Score=48.50  Aligned_cols=55  Identities=24%  Similarity=0.359  Sum_probs=38.0

Q ss_pred             CCCEEEEEEccCCCEEEEecCCCcEEEEecCCCeEEE--Eec-----CCCCCCeeEEEEcCC
Q psy10063        409 SAKITSLLWGNLDQYIITGHAKGDICTWDLRMGRELE--SIS-----GHAKEPINDMQFSKD  463 (894)
Q Consensus       409 ~~~V~~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~--~l~-----~h~~~~V~~v~~spd  463 (894)
                      -..-++|+|.|||++|++--..|.|++++...++...  .+.     .+.......|+|+|+
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            4567799999999888777557889998877765432  221     122236788999885

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.87  Score=44.40  Aligned_cols=184  Identities=9%  Similarity=-0.072  Sum_probs=103.5

Q ss_pred             cCCCCEEEEEEccCCCEEEEec-CCCcEEEEecCCCe----EEEEecCCCCCCeeEEEEcCCCCEEEEEeCC--------
Q psy10063        407 DQSAKITSLLWGNLDQYIITGH-AKGDICTWDLRMGR----ELESISGHAKEPINDMQFSKDATMFITASHS--------  473 (894)
Q Consensus       407 ~H~~~V~~l~~spdg~~L~sgs-~Dg~I~iWd~~tg~----~~~~l~~h~~~~V~~v~~spdg~~la~~~~d--------  473 (894)
                      .....+.+|+|.+..++|+-.. .++.|+..++....    ....+..... .+..|++...++.|..+...        
T Consensus        27 ~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~-~p~glAvD~~~~~lY~~d~~~~~I~v~~  105 (266)
T d1ijqa1          27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVLGTVSVAD  105 (266)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCC-CcceEEEeeccceEEEEecCCCEEEeEe
Confidence            3456778899998887777654 45567666664321    1222222222 56678877655555444322        


Q ss_pred             --CCc---------cceEEEEEecCCCEEEEEEC--CCCEEEEEcCCCcEEEEEeC-CCCeeEEEEcCCCCEEEEEECCC
Q psy10063        474 --QAV---------EPINDMQFSKDATMFITASK--DHTAKLFTTHDRQLLKTYTT-ERPVNSAALSPILPHVVLGGGQE  539 (894)
Q Consensus       474 --~~i---------~~V~~l~~spdg~~L~sgs~--Dg~V~iwdl~~~~~~~~~~~-~~~v~~l~~spdg~~l~~~~~~~  539 (894)
                        +..         .....|++.|...+|+....  .+.|...++........+.. -....+|++.+.+++|+.+....
T Consensus       106 ~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~  185 (266)
T d1ijqa1         106 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL  185 (266)
T ss_dssp             TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred             cCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCc
Confidence              211         35678888886666655443  23455555544333333333 35678999999999888886554


Q ss_pred             CeEEEeccCccceeeEEEEeccccceEEEc--cCCCCCeEEEEEecCCCEEEEE-eCCCcEEEEECCCCc
Q psy10063        540 AREVTTTSTKVGKFDARFYHLIFEEEFARI--KGHFGPINSLAFHPDGKSYASG-GEDGFLISNTLSNGL  606 (894)
Q Consensus       540 ~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l--~~h~~~V~~l~~spdg~~l~sg-s~Dg~I~vwdl~~~~  606 (894)
                      ..             |...++........+  ........+|++.  +.+|+.. ..++.|+..+...+.
T Consensus       186 ~~-------------I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~  240 (266)
T d1ijqa1         186 HS-------------ISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS  240 (266)
T ss_dssp             TE-------------EEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred             CE-------------EEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCCc
Confidence            32             566666543322222  2233456677776  3445444 456777777765543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.69  E-value=0.056  Score=60.26  Aligned_cols=80  Identities=11%  Similarity=0.134  Sum_probs=57.1

Q ss_pred             CCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC-e
Q psy10063        498 HTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP-I  576 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~-V  576 (894)
                      |.|.-+|+.+|+++..+....++.+-.++-.|.+|++++.++.              ++.+|.++|+++-+++-.... -
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~--------------l~A~Da~TGe~LW~~~~~~~~~~  531 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGY--------------FKAFDAKSGKELWKFQTGSGIVS  531 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSE--------------EEEEETTTCCEEEEEECSSCCCS
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCe--------------EEEEECCCCcEeEEEECCCCccc
Confidence            6788899999999988886665554445667888888888875              899999999999877532221 1


Q ss_pred             EEEEEecCCC-EEEEE
Q psy10063        577 NSLAFHPDGK-SYASG  591 (894)
Q Consensus       577 ~~l~~spdg~-~l~sg  591 (894)
                      .-+.|..+|+ ||+..
T Consensus       532 ~P~ty~~~G~qYv~i~  547 (582)
T d1flga_         532 PPITWEQDGEQYLGVT  547 (582)
T ss_dssp             CCEEEEETTEEEEEEE
T ss_pred             cCEEEEECCEEEEEEE
Confidence            1256677886 44443

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.38  E-value=0.28  Score=50.10  Aligned_cols=51  Identities=16%  Similarity=0.134  Sum_probs=36.2

Q ss_pred             CcccccCCCCcceecCCCCceEEEeeCCCCCEEEEe-cCCCcEEEEEccCCc
Q psy10063        743 GTPFKLDGSDTPILAGPVDIGFKMPEPPKREKLALA-LADKVSERYRDRKNK  793 (894)
Q Consensus       743 g~~~~~dg~~~~~~~~h~~~v~~la~spdg~~Latg-s~Dg~I~iwd~~~~~  793 (894)
                      +.++.+++....++.........|+++||+++|+++ ...+.|++|++....
T Consensus       188 g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~  239 (340)
T d1v04a_         188 SFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW  239 (340)
T ss_dssp             EEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             eeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence            334555666666665556678899999999877654 567789999887544

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.32  E-value=0.023  Score=58.76  Aligned_cols=118  Identities=14%  Similarity=0.101  Sum_probs=63.2

Q ss_pred             cCCC-EEEEEE---CCCCEEEEEcCCCc--EE--EEEeCC--CCeeEEEEcCCCCEEEEEECCCC---eEEEeccCccce
Q psy10063        486 KDAT-MFITAS---KDHTAKLFTTHDRQ--LL--KTYTTE--RPVNSAALSPILPHVVLGGGQEA---REVTTTSTKVGK  552 (894)
Q Consensus       486 pdg~-~L~sgs---~Dg~V~iwdl~~~~--~~--~~~~~~--~~v~~l~~spdg~~l~~~~~~~~---~~v~~~~~~~~~  552 (894)
                      ++|+ +|++..   ....|.||++....  +.  ..+.+.  .....|++..+|..+++-.....   ...+..-.....
T Consensus       108 ~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~  187 (340)
T d1v04a_         108 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW  187 (340)
T ss_dssp             TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCC
T ss_pred             CCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCc
Confidence            4555 344443   34678888875322  22  233332  45788999988876666321111   011111111111


Q ss_pred             eeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEEe-CCCcEEEEECCCCc
Q psy10063        553 FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGG-EDGFLISNTLSNGL  606 (894)
Q Consensus       553 ~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs-~Dg~I~vwdl~~~~  606 (894)
                      -.+..|+.  ++. ..+...-.....|++++|+++|+.+. ..+.|++|++....
T Consensus       188 g~v~~~~~--~~~-~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~  239 (340)
T d1v04a_         188 SFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW  239 (340)
T ss_dssp             EEEEEECS--SCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             eeEEEEcC--Cce-EEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence            12334443  333 22223345678999999998776554 56789999887543

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.24  E-value=0.36  Score=49.84  Aligned_cols=171  Identities=8%  Similarity=0.071  Sum_probs=93.8

Q ss_pred             CCccceeeeeccCccEEEecCCCeEEE-EEe-----------c-------CCCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy10063        377 PLSVDRLNSMSPAARKLATNAEPVVKM-QVT-----------D-------QSAKITSLLWGNLDQYIITGHAKGDICTWD  437 (894)
Q Consensus       377 ~~~~~~~~~~s~dg~~l~~~~~~~~~~-~l~-----------~-------H~~~V~~l~~spdg~~L~sgs~Dg~I~iWd  437 (894)
                      +.....+++++....+++.++...+++ .+.           +       .-..|..|+|+-|  .|+... ++.+.+++
T Consensus        35 P~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~~-~~~l~~~~  111 (381)
T d1xipa_          35 PFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVST-RNALYSLD  111 (381)
T ss_dssp             CSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEEE-SSEEEEEE
T ss_pred             CccccceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEEe-CCCEEEEE
Confidence            344555667776666665554443333 110           0       1135888888754  455443 44577777


Q ss_pred             cCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEE---
Q psy10063        438 LRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY---  514 (894)
Q Consensus       438 ~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~---  514 (894)
                      ...-........-..                         .+.++.+.|.  .++....++.+.++++..++.....   
T Consensus       112 ~~~l~~~~~~~~~~~-------------------------~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v  164 (381)
T d1xipa_         112 LEELSEFRTVTSFEK-------------------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNV  164 (381)
T ss_dssp             SSSTTCEEEEEECSS-------------------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESE
T ss_pred             eeccccccccccccc-------------------------cccceecCCc--eeEEEecCCCEEEEEeccCccccccCCc
Confidence            655333222222222                         4566666653  4666677899999999888654432   


Q ss_pred             ---eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCCeEEEEEecCCCEEEEE
Q psy10063        515 ---TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASG  591 (894)
Q Consensus       515 ---~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg  591 (894)
                         ...+.+.+++|++.|+.++++.++..             +++. ++.....+.........|.+|.|-....+++.-
T Consensus       165 ~~~~~~~~~~~v~ws~kgkq~v~~~g~~~-------------q~k~-~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         165 TSFDVTNSQLAVLLKDRSFQSFAWRNGEM-------------EKQF-EFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEEEECSSEEEEEETTSCEEEEEEETTEE-------------EEEE-EECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             ceEEecCCceEEEEeCCcEEEEEeCCCce-------------eecc-CCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence               23567888999988888887644321             0111 111111111111234568899998766655543

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.71  E-value=2.2  Score=41.71  Aligned_cols=105  Identities=12%  Similarity=0.090  Sum_probs=65.9

Q ss_pred             EecCCCEEEEEECCCCEEEEEcCCCcEEEEEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEecccc
Q psy10063        484 FSKDATMFITASKDHTAKLFTTHDRQLLKTYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFE  563 (894)
Q Consensus       484 ~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~  563 (894)
                      .+|..+.||.-+ ...|+|||++..+.++.+....+|.-..|-.+ +.|+......               |.-|+++..
T Consensus        70 MhP~~~IiALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~lVT~ta---------------VYHW~~~g~  132 (327)
T d1utca2          70 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVTDNA---------------VYHWSMEGE  132 (327)
T ss_dssp             ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEESSS-SEEEEECSSE---------------EEEEESSSS
T ss_pred             cCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCCcEEEEecCC-CEEEEEcCCc---------------eEEEcccCC
Confidence            456666666555 45799999999999999999889988888765 4555555443               444554221


Q ss_pred             -ceEEEccCCC----CCeEEEEEecCCCEEEEEe---C----CCcEEEEECCCC
Q psy10063        564 -EEFARIKGHF----GPINSLAFHPDGKSYASGG---E----DGFLISNTLSNG  605 (894)
Q Consensus       564 -~~~~~l~~h~----~~V~~l~~spdg~~l~sgs---~----Dg~I~vwdl~~~  605 (894)
                       .+.+.+..|.    ..|..-..++++++++..+   .    .|.+.+|..+..
T Consensus       133 s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~  186 (327)
T d1utca2         133 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK  186 (327)
T ss_dssp             CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred             CCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC
Confidence             2333333332    3455666677788766443   1    245667766554

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.17  E-value=2.8  Score=40.85  Aligned_cols=94  Identities=9%  Similarity=0.110  Sum_probs=65.7

Q ss_pred             EEEEccCCCEEEEecCCCcEEEEecCCCeEEEEecCCCCCCeeEEEEcCCCCEEEEEeCCCCccceEEEEEecCCCEEEE
Q psy10063        414 SLLWGNLDQYIITGHAKGDICTWDLRMGRELESISGHAKEPINDMQFSKDATMFITASHSQAVEPINDMQFSKDATMFIT  493 (894)
Q Consensus       414 ~l~~spdg~~L~sgs~Dg~I~iWd~~tg~~~~~l~~h~~~~V~~v~~spdg~~la~~~~d~~i~~V~~l~~spdg~~L~s  493 (894)
                      +.-.+|..+.||.-+ ...|.|||+++.+.++.+.-.+.                          |.-..|-.+ +.|+.
T Consensus        67 sAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~--------------------------VvfWkWis~-~~L~l  118 (327)
T d1utca2          67 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--------------------------VTFWKWISL-NTVAL  118 (327)
T ss_dssp             EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC--------------------------CCEEEESSS-SEEEE
T ss_pred             hhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCC--------------------------cEEEEecCC-CEEEE
Confidence            445678888888766 45899999999999998887663                          444555543 33444


Q ss_pred             EECCCCEEEEEcCC-CcEEEEEeC-----CCCeeEEEEcCCCCEEEEEE
Q psy10063        494 ASKDHTAKLFTTHD-RQLLKTYTT-----ERPVNSAALSPILPHVVLGG  536 (894)
Q Consensus       494 gs~Dg~V~iwdl~~-~~~~~~~~~-----~~~v~~l~~spdg~~l~~~~  536 (894)
                      .. +..|+-|+++. ..+.+.|+.     ...|..-..+++++++++.|
T Consensus       119 VT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~G  166 (327)
T d1utca2         119 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG  166 (327)
T ss_dssp             EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred             Ec-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEe
Confidence            43 45689999853 346666663     24677788889999888765

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.58  E-value=4.6  Score=38.71  Aligned_cols=73  Identities=14%  Similarity=-0.004  Sum_probs=38.5

Q ss_pred             CCCeEEEEecCCCCc-eeEEEeecCCcceeeeccCCCCCeeEEEEeeCCcEEEEecCCCc-----EEEEecCccccccc
Q psy10063        810 DTTREVTTTSTKVGK-FDARFYHLIFEEEFARIKGHFGPINSLAFHPDGKSYASGGEDGF-----VRLHTFDQAYFDYT  882 (894)
Q Consensus       810 dg~~l~~as~d~~g~-~~I~vwd~~tg~~l~~l~gH~~~V~~l~fSpdg~~LaS~s~Dg~-----V~vWdl~~~~~~~~  882 (894)
                      .+...+.++.+.... ..+.+||....+....-........+-+...++++++.||.++.     |.+||++.......
T Consensus       195 ~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~  273 (288)
T d1zgka1         195 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV  273 (288)
T ss_dssp             TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred             eeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEecCCCCeecceEEEEECCCCEEEEC
Confidence            344444443333221 24678887765443321111122222223347898898886653     78899987765444

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.31  E-value=7.4  Score=39.43  Aligned_cols=98  Identities=8%  Similarity=-0.017  Sum_probs=60.3

Q ss_pred             ceEEEEEecCCCEEEEEECCCCEEEEEcCCCcEEEEE-eCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEE
Q psy10063        478 PINDMQFSKDATMFITASKDHTAKLFTTHDRQLLKTY-TTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDAR  556 (894)
Q Consensus       478 ~V~~l~~spdg~~L~sgs~Dg~V~iwdl~~~~~~~~~-~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~  556 (894)
                      .|..++|+.|  .|+.. .++.+..++...-...... ....++..+.+.|.  .+++....+.              +.
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~--------------~~  148 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVND--------------LS  148 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSE--------------EE
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCC--------------EE
Confidence            5888899754  45544 4566788887664443332 23567888888874  4555555554              55


Q ss_pred             EEeccccceEEEcc-----CCCCCeEEEEEecCCCEEEEEeCC
Q psy10063        557 FYHLIFEEEFARIK-----GHFGPINSLAFHPDGKSYASGGED  594 (894)
Q Consensus       557 vwd~~~~~~~~~l~-----~h~~~V~~l~~spdg~~l~sgs~D  594 (894)
                      ++++..++......     .-.+.+.+++|++.|..++.+..+
T Consensus       149 ~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~  191 (381)
T d1xipa_         149 ALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNG  191 (381)
T ss_dssp             EEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEETT
T ss_pred             EEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEeCCC
Confidence            55665554322211     123568889998888888887543

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.18  E-value=1.4  Score=42.65  Aligned_cols=98  Identities=12%  Similarity=0.014  Sum_probs=46.2

Q ss_pred             CCEEEEEcCCCcEEEEEeCC--CCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEEeccccceEEEccCCCCC
Q psy10063        498 HTAKLFTTHDRQLLKTYTTE--RPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFYHLIFEEEFARIKGHFGP  575 (894)
Q Consensus       498 g~V~iwdl~~~~~~~~~~~~--~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vwd~~~~~~~~~l~~h~~~  575 (894)
                      ..+.+||....+....-...  ....+++.. .++.++.++.++..         ...++.++|....+....-......
T Consensus       164 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~GG~~~~~---------~~~~~~~~~~~~~~~~~~~~~p~~r  233 (288)
T d1zgka1         164 NSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQD---------QLNSVERYDVETETWTFVAPMKHRR  233 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSS---------BCCCEEEEETTTTEEEECCCCSSCC
T ss_pred             ceEEEeeccccccccccccccccccccccce-eeeEEEecCccccc---------cccceeeeeecceeeecccCccCcc
Confidence            34778887766544322211  111222222 34455555444321         1123667777765544322211222


Q ss_pred             eEEEEEecCCCEEEEEeCCCc-----EEEEECCCC
Q psy10063        576 INSLAFHPDGKSYASGGEDGF-----LISNTLSNG  605 (894)
Q Consensus       576 V~~l~~spdg~~l~sgs~Dg~-----I~vwdl~~~  605 (894)
                      ..+.+...++++++.|+.++.     |.+||++..
T Consensus       234 ~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~  268 (288)
T d1zgka1         234 SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD  268 (288)
T ss_dssp             BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             cceEEEEECCEEEEEecCCCCeecceEEEEECCCC
Confidence            211222236788888775543     677777654

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.91  E-value=16  Score=36.01  Aligned_cols=111  Identities=12%  Similarity=0.016  Sum_probs=67.0

Q ss_pred             CCCEEEEEECCCCEEEEEcCCCc------EEE--EEeCCCCeeEEEEcCCCCEEEEEECCCCeEEEeccCccceeeEEEE
Q psy10063        487 DATMFITASKDHTAKLFTTHDRQ------LLK--TYTTERPVNSAALSPILPHVVLGGGQEAREVTTTSTKVGKFDARFY  558 (894)
Q Consensus       487 dg~~L~sgs~Dg~V~iwdl~~~~------~~~--~~~~~~~v~~l~~spdg~~l~~~~~~~~~~v~~~~~~~~~~~v~vw  558 (894)
                      ...+|+..+..|.++...+....      -+.  .+...+.+..+.+..+...|+.++..|....+..+.      |+..
T Consensus       105 ~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~------vr~~  178 (323)
T d1wp5a_         105 LNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESE------VSIV  178 (323)
T ss_dssp             SSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGG------SCBC
T ss_pred             cceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEEEecceeeEeeccc------cccc
Confidence            36788889999999999874321      222  233457788888888888999999988754333221      1111


Q ss_pred             ec-cccceEEEccCCCCCeEEE-EEecCCCEEEEEeCCCcEEEEECCC
Q psy10063        559 HL-IFEEEFARIKGHFGPINSL-AFHPDGKSYASGGEDGFLISNTLSN  604 (894)
Q Consensus       559 d~-~~~~~~~~l~~h~~~V~~l-~~spdg~~l~sgs~Dg~I~vwdl~~  604 (894)
                      .. ..|.....|. ..+.|.++ .+..++..|+..+..|..+.-.+..
T Consensus       179 gr~a~GV~~ikL~-~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e  225 (323)
T d1wp5a_         179 GVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE  225 (323)
T ss_dssp             CSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             Ccccccccccccc-cccccchhhhccccccceeeeeeeheeecccchh
Confidence            10 0111111222 22344444 4455677888899999888866543