Psyllid ID: psy10114
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 819 | 2.2.26 [Sep-21-2011] | |||||||
| Q9R1K5 | 493 | Fizzy-related protein hom | yes | N/A | 0.581 | 0.965 | 0.696 | 0.0 | |
| Q9UM11 | 496 | Fizzy-related protein hom | yes | N/A | 0.582 | 0.961 | 0.687 | 0.0 | |
| Q8L3Z8 | 483 | Protein FIZZY-RELATED 2 O | yes | N/A | 0.507 | 0.861 | 0.561 | 1e-133 | |
| Q8VZS9 | 475 | Protein FIZZY-RELATED 1 O | no | N/A | 0.500 | 0.863 | 0.564 | 1e-127 | |
| Q54KM3 | 754 | Anaphase-promoting comple | yes | N/A | 0.415 | 0.450 | 0.571 | 1e-118 | |
| Q8LPL5 | 481 | Protein FIZZY-RELATED 3 O | no | N/A | 0.367 | 0.625 | 0.669 | 1e-118 | |
| O94423 | 421 | Meiotic fizzy-related pro | yes | N/A | 0.489 | 0.952 | 0.477 | 1e-110 | |
| O13286 | 556 | WD repeat-containing prot | no | N/A | 0.429 | 0.633 | 0.522 | 1e-102 | |
| Q54MZ3 | 499 | Anaphase-promoting comple | no | N/A | 0.406 | 0.667 | 0.515 | 5e-97 | |
| P53197 | 566 | APC/C activator protein C | yes | N/A | 0.416 | 0.602 | 0.485 | 2e-93 |
| >sp|Q9R1K5|FZR_MOUSE Fizzy-related protein homolog OS=Mus musculus GN=Fzr1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/488 (69%), Positives = 394/488 (80%), Gaps = 12/488 (2%)
Query: 340 MENLATEDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNR 398
+ + ++ENT P + ++ ++PA S+ + DR+IPSR G W F I +N
Sbjct: 10 LRQIIIQNENTVPCVSEMRRTLTPANSPVSSPSK-HGDRFIPSRAGANWSVNFHRINENE 68
Query: 399 TCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLF 456
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+ + LF
Sbjct: 69 KSPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEHKGLF 128
Query: 457 QY-----LPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQ 511
Y +P+ ++ SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQ
Sbjct: 129 TYSLSSKRSSPDDGNDV---SPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQ 185
Query: 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571
DDFYLNLVDWSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVA
Sbjct: 186 DDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVA 245
Query: 572 VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQS 631
VGTH G+VQ+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QS
Sbjct: 246 VGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQS 305
Query: 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691
ERRL GHRQEVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSP
Sbjct: 306 ERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSP 365
Query: 692 HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQI 751
H HGLLASGGGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQI
Sbjct: 366 HQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQI 425
Query: 752 LVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSV 811
LVWKYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS +ES SV
Sbjct: 426 LVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKESVSV 485
Query: 812 LNLFSSIR 819
LNLF+ IR
Sbjct: 486 LNLFTRIR 493
|
Key regulator of ligase activity of the anaphase promoting complex/cyclosome (APC/C), which confers substrate specificity upon the complex. Associates with the APC/C in late mitosis, in replacement of CDC20, and activates the APC/C during anaphase and telophase. The APC/C remains active in degrading substrates to ensure that positive regulators of the cell cycle do not accumulate prematurely. At the G1/S transition FZR1 is phosphorylated, leading to its dissociation from the APC/C. Following DNA damage, it is required for the G2 DNA damage checkpoint: its dephosphorylation and reassociation with the APC/C leads to the ubiquitination of PLK1, preventing entry into mitosis. Mus musculus (taxid: 10090) |
| >sp|Q9UM11|FZR_HUMAN Fizzy-related protein homolog OS=Homo sapiens GN=FZR1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/490 (68%), Positives = 389/490 (79%), Gaps = 13/490 (2%)
Query: 340 MENLATEDENTAPPLDLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRT 399
+ + ++ENT P + S ++ DR+IPSR G W F I +N
Sbjct: 10 LRQIVIQNENTMPRVTEMRRTLTPASSPVSSPSKHGDRFIPSRAGANWSVNFHRINENEK 69
Query: 400 CSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQ 457
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+++ LF
Sbjct: 70 SPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKGLFT 129
Query: 458 Y-----LPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQD 512
Y +P+ ++ SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQD
Sbjct: 130 YSLSTKRSSPDDGNDV---SPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQD 186
Query: 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV 572
DFYLNLVDWSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAV
Sbjct: 187 DFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAV 246
Query: 573 GTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSE 632
GTH G+VQ+WD + K++ L GHTARVGALAWN + LSSGSRDRMILQRD+RTP QSE
Sbjct: 247 GTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNAEQLSSGSRDRMILQRDIRTPPLQSE 306
Query: 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH 692
RRL GHRQEVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH
Sbjct: 307 RRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPH 366
Query: 693 HHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752
HGLLASGGGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQIL
Sbjct: 367 QHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQIL 426
Query: 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR---ESK 809
VWKYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS + ES
Sbjct: 427 VWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKVKWESV 486
Query: 810 SVLNLFSSIR 819
SVLNLF+ IR
Sbjct: 487 SVLNLFTRIR 496
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Key regulator of ligase activity of the anaphase promoting complex/cyclosome (APC/C), which confers substrate specificity upon the complex. Associates with the APC/C in late mitosis, in replacement of CDC20, and activates the APC/C during anaphase and telophase. The APC/C remains active in degrading substrates to ensure that positive regulators of the cell cycle do not accumulate prematurely. At the G1/S transition FZR1 is phosphorylated, leading to its dissociation from the APC/C. Following DNA damage, it is required for the G2 DNA damage checkpoint: its dephosphorylation and reassociation with the APC/C leads to the ubiquitination of PLK1, preventing entry into mitosis. Homo sapiens (taxid: 9606) |
| >sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/445 (56%), Positives = 305/445 (68%), Gaps = 29/445 (6%)
Query: 373 VKADRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGA 432
+ +DR+IPSR G + F P P K + G S Y LLR + G
Sbjct: 59 IYSDRFIPSRSGSNFAL-FDLSPS-------PSKDGKEDGAGS-----YATLLRAAMFGP 105
Query: 433 NIEGVKGQCDEKRVI--FSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSP 490
+ EKR I FS R N+F++ E+ ++ + SP+ + P P
Sbjct: 106 -------ETPEKRDITGFSSSR-NIFRF--KTETHRSLNSFSPFGVDDDSPGVSH--SGP 153
Query: 491 RKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCD 550
KA RK+ R P+KVLDAP LQDDFYLNLVDWS+QNVL+VGLG+CVYLW+AC+S+VT+LCD
Sbjct: 154 VKAPRKVPRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCD 213
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML 610
L A+ +SV SV W RG +AVGT G VQ+WD S K+ + GH RVGALAW +L
Sbjct: 214 LGAE-DSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSSVL 272
Query: 611 SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670
SSGSRD+ ILQRD+R + L GH+ EVCGLKWS DN+ LASGGNDNRL+VWN HS
Sbjct: 273 SSGSRDKSILQRDIRCQEDHVSK-LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 331
Query: 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN 730
P+ Y+EH AAVKAIAWSPH HGLLASGGGTADRCIRFWNT T + +DT SQVCN
Sbjct: 332 TQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCN 391
Query: 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790
LAWSK+ +ELVSTHGYSQNQI+VWKYPT++++A LTGH+YRVLYLA+SPDG+ IVTGAGD
Sbjct: 392 LAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGD 451
Query: 791 ETLRFWNVFSKVRSQRESKSVLNLF 815
ETLRFWNVF +SQ + + F
Sbjct: 452 ETLRFWNVFPSPKSQNTDSEIGSSF 476
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Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Necessary and sufficient for endoreduplication and correct cell expansion. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VZS9|FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN=FZR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 305/441 (69%), Gaps = 31/441 (7%)
Query: 373 VKADRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGA 432
+ +DR+IPSR G +F + S KK + G S Y LL+ L G
Sbjct: 50 IYSDRFIPSRSGS------NFALFDLASSSPNKKDGKEDGAGS-----YASLLKTALFGP 98
Query: 433 NIEGVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYS---LSPVGPKSQKLLRS 489
V + + FSP N+F++ + +N+ P+ +S V P S
Sbjct: 99 ----VTPEKSDVVNGFSPSG-NIFRFKTETQRSLNLYP--PFDSDVVSGVSP-------S 144
Query: 490 PRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLC 549
P K+ RKI R P+KVLDAP LQDDFYLNLVDWS+QNVL+VGLG+CVYLW+AC+S+VT+LC
Sbjct: 145 PVKSPRKILRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLC 204
Query: 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDM 609
DL D +V SV W RG +A+GT G VQ+WDV K + + GH RVGALAW+ +
Sbjct: 205 DLGVD-ETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSV 263
Query: 610 LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669
LSSGSRD+ ILQRD+RT + L GH+ E+CGLKWS DN+ LASGGNDN+L+VWN H
Sbjct: 264 LSSGSRDKSILQRDIRTQEDHVSK-LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQH 322
Query: 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729
S P+ + EH AAVKAIAWSPHH GLLASGGGTADRCIRFWNT T + CVDT SQVC
Sbjct: 323 STQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVC 382
Query: 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789
NL WSK+ +ELVSTHGYSQNQI+VWKYPT++++A LTGHSYRVLYLA+SPDG+ IVTGAG
Sbjct: 383 NLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAG 442
Query: 790 DETLRFWNVFSKVRSQ-RESK 809
DETLRFWNVF +SQ RES+
Sbjct: 443 DETLRFWNVFPSPKSQSRESE 463
|
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Arabidopsis thaliana (taxid: 3702) |
| >sp|Q54KM3|CDH1_DICDI Anaphase-promoting complex subunit cdh1 OS=Dictyostelium discoideum GN=cdh1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/378 (57%), Positives = 264/378 (69%), Gaps = 38/378 (10%)
Query: 472 SPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGL 531
SPYSLS + SQKLL SPRK RKIS+ P K+LDAP ++DDFYLNL+DWSS N+L+VGL
Sbjct: 372 SPYSLSLLSDDSQKLLSSPRKPQRKISKTPIKILDAPMIKDDFYLNLIDWSSHNILAVGL 431
Query: 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNL-VAVGTHHGYVQVWDVSVAKQV 590
+ VYLW+A TSQV++LC++ + G V+SV W +RG + +A+G G V +WDV+ K++
Sbjct: 432 DTSVYLWNATTSQVSKLCEMES-GQPVSSVGWIQRGGIHLAIGGTDGVVSIWDVNKKKKI 490
Query: 591 HKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650
+L GH RV ALAWN +LSSG +D++IL DVR ++ RLVGHR E+CGLKWSPD
Sbjct: 491 RELQGHNTRVNALAWNNHILSSGGKDKVILHHDVRDCSNNYTNRLVGHRHEICGLKWSPD 550
Query: 651 NQYLASGGNDNRLYVWNLHSMS--------------------------------PLQTYT 678
Q LASGGNDN L VW+ HSM+ PL +
Sbjct: 551 GQQLASGGNDNLLNVWD-HSMTQQPQQQHQPPPPPPSSNTSSISQQQQQQNTSKPLYQFK 609
Query: 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSS 738
H AAVKAIAWSPH GLLASGGGT D+CIRFWNT TGQ +Q +DTGSQVCNLAWSK+ +
Sbjct: 610 FHYAAVKAIAWSPHQRGLLASGGGTHDKCIRFWNTTTGQSIQSIDTGSQVCNLAWSKNIN 669
Query: 739 ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
ELVSTHGYSQNQI VW YPT+T V LTGH+ RVLYLA+SPDG+ + TGAGD +LRFWN+
Sbjct: 670 ELVSTHGYSQNQITVWNYPTMTPVTTLTGHTMRVLYLAVSPDGQTVCTGAGDNSLRFWNL 729
Query: 799 FSKVRSQRESKSVLNLFS 816
F S +ES NL S
Sbjct: 730 FP---SNKESSFSSNLDS 744
|
Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q8LPL5|FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/303 (66%), Positives = 239/303 (78%), Gaps = 2/303 (0%)
Query: 503 KVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVA 562
KVLDAP LQDDFYLN+VDWSSQNVL+VGLG+CVYLW+A S+VT+LCDL + +SV SV
Sbjct: 164 KVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPN-DSVCSVQ 222
Query: 563 WNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQR 622
W G+ +++GT HG VQVWD + K+V + GH R G LAWN +LSSGSRDR ILQ
Sbjct: 223 WTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQH 282
Query: 623 DVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLA 682
D+R S +LVGH+ EVCGLKWS D++ LASGGNDN+L VWN HS P+ TEH A
Sbjct: 283 DIRV-QSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTA 341
Query: 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVS 742
AVKAI WSPH LLASGGGTADRCIRFWNT G + +DTGSQVCNLAWSK+ +E+VS
Sbjct: 342 AVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVS 401
Query: 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802
THGYSQNQI++WKYP++++VA LTGHS RVLYLA SPDG+ IVTGAGDETLRFWNVF V
Sbjct: 402 THGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSV 461
Query: 803 RSQ 805
+ Q
Sbjct: 462 KMQ 464
|
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Arabidopsis thaliana (taxid: 3702) |
| >sp|O94423|MFR1_SCHPO Meiotic fizzy-related protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 275/436 (63%), Gaps = 35/436 (8%)
Query: 375 ADRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKT--REVSGETSRDGLAYTCLLRNELLGA 432
DR+IP R + FSF + C + R+ SG R + LL EL G+
Sbjct: 2 GDRFIPIRNVSN-EFNFSF-QSFKECVLSHGSNLRRKTSGTIQRQ---FMELLSMELFGS 56
Query: 433 NIE-------GVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQK 485
G + EK+++ +PDR++ YSLSP+ P+SQ
Sbjct: 57 QASRSRAFYYGEDKRKIEKKMLDTPDRKS-------------------YSLSPISPQSQD 97
Query: 486 LLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQV 545
+LR P+K R + P+K+LDAP L++DFYLNL+DW NVL+VGL S +YLWSA + +V
Sbjct: 98 MLRQPQKPKRAFPKTPYKILDAPYLKNDFYLNLLDWGQSNVLAVGLASSIYLWSAASGKV 157
Query: 546 TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW 605
+L D A N VTSV W +G +AVGT G + +WD+ K V L GH+ RV ALAW
Sbjct: 158 VQLHDFGAT-NHVTSVLWTGKGTQLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAW 216
Query: 606 NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665
N + L+SG +D +IL D+R P +E V H QE+CGL+W LASGGNDN L+V
Sbjct: 217 NDNTLTSGGKDEVILHHDLRAPGCCAEMMKV-HEQEICGLQWDRSLGQLASGGNDNNLFV 275
Query: 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725
W+ S PL + EH AAVKAI WSPH G+LASGGGT DRC+ NTLTG+ +DTG
Sbjct: 276 WDYRSSRPLHKFEEHTAAVKAIGWSPHQRGILASGGGTIDRCLTIHNTLTGRLQNKLDTG 335
Query: 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV 785
SQVCN+AWSK S+E+V+THG+++NQ+ +WKYP+L +A LT H+ RVLYL+MSPDG++IV
Sbjct: 336 SQVCNMAWSKTSNEIVTTHGFAKNQVSLWKYPSLKNIANLTAHTNRVLYLSMSPDGQSIV 395
Query: 786 TGAGDETLRFWNVFSK 801
TGAGDETLRFW +F+K
Sbjct: 396 TGAGDETLRFWKLFNK 411
|
Meiosis-specific activator of the anaphase promoting complex/cyclosome (APC/C). Involved in cdc13 degradation. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O13286|SRW1_SCHPO WD repeat-containing protein srw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srw1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 243/358 (67%), Gaps = 6/358 (1%)
Query: 445 RVIF---SPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIP 501
R IF SP RN Y + + N T YSLSPV ++ L+ + R R++ IP
Sbjct: 180 RKIFHYLSPRDRNKSSYGKKAQYQDNPNRTI-YSLSPVRSITKDLISASRLEGRELPSIP 238
Query: 502 FKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSV 561
++VLDAP L DFYLNL+DW N+L+V L S VYLWS +S+VT + + ++VTS+
Sbjct: 239 YRVLDAPGLAGDFYLNLLDWGQCNMLAVALASRVYLWSGISSEVTVMHNFYPT-DTVTSL 297
Query: 562 AWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQ 621
W +RG +AVGTH+G V++WD + K+ + GHT RVGAL+WN +LSSG RD IL
Sbjct: 298 RWVQRGTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWNDHVLSSGGRDNHILH 357
Query: 622 RDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHL 681
RDVR P R L HRQEVCGL+W+ + LASGGNDN L VW+ PL ++ H+
Sbjct: 358 RDVRAP-EHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNHI 416
Query: 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741
AAVKAI WSPH G+LASGGGTADR I+ WNT G + +DTGSQVCNL WSK ++E +
Sbjct: 417 AAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNIDTGSQVCNLLWSKQTNEFI 476
Query: 742 STHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799
STHG+ +N++ +W YP++++V L GH+ RVLYLAMSP+GE IVTGA DETLRFW +F
Sbjct: 477 STHGFMENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKLF 534
|
Has a role in cell differentiation and cell cycling by negatively regulating cig2 and cdc12-associated cdc2. Down-regulates the level of cdc13, particularly in a nitrogen deprived environment. Regulator of cell cycle G1 phase progression. Prevents onset of mitosis during the pre-Start G1 period. Required for degradation of cdc13 mitotic cyclin B during G1 arrest but not during mitotic exit. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 237/347 (68%), Gaps = 14/347 (4%)
Query: 474 YSLSPVG--PKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGL 531
YS + VG P Q L +K R+I + P ++LDAP++ DD+YLNL+DWSSQNV+++ L
Sbjct: 144 YSQNQVGSTPTDQSL----KKQFRQIPQQPERILDAPDIVDDYYLNLLDWSSQNVIAIPL 199
Query: 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591
G VYLW+A TS++ RL + + +TS+ W + GN +AVGT+ +Q+WDV+ K+V
Sbjct: 200 GQTVYLWNATTSEIQRLFQVEQQDDYITSLQWTKDGNYLAVGTNSCTIQLWDVAHTKKVR 259
Query: 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651
+L GH RVGALAWN +LSSGS D I DVR N L GH QEVCGLKWS D
Sbjct: 260 ELRGHAGRVGALAWNDYILSSGSSDTNIFNHDVRVQNHHVST-LSGHSQEVCGLKWSHDG 318
Query: 652 QYLASGGNDNRLYVWNLHSM---SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCI 708
LASGGNDN + +W+++S +P T+ +H AAV+A+AW P LLA+GGG ADR I
Sbjct: 319 GQLASGGNDNIINIWDINSENFETPAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTI 378
Query: 709 RFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768
RFWNT+TG + VDT SQVC++ WS ELVS+HGYSQNQ+ VWKYP++ + A+LTGH
Sbjct: 379 RFWNTITGVCLNTVDTMSQVCSIQWSTTYRELVSSHGYSQNQLCVWKYPSMVKCAELTGH 438
Query: 769 SYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR----SQRESKSV 811
+ R L+ A+SPDGE +V+ + DETLRFW VF K + R+SK V
Sbjct: 439 TSRALHTAISPDGETVVSASADETLRFWRVFEKENKLPTANRKSKEV 485
|
Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. Dictyostelium discoideum (taxid: 44689) |
| >sp|P53197|CDH1_YEAST APC/C activator protein CDH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDH1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/346 (48%), Positives = 238/346 (68%), Gaps = 5/346 (1%)
Query: 475 SLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSC 534
S+SPV P S++LL SP K R+I+++P++VLDAP L DDFY +L+DWSS +VL+V LG
Sbjct: 225 SMSPVRPDSKQLLLSPGKQFRQIAKVPYRVLDAPSLADDFYYSLIDWSSTDVLAVALGKS 284
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594
++L T V LCD N TS++W G+ +AVG +G V+++DV K + L
Sbjct: 285 IFLTDNNTGDVVHLCDTE---NEYTSLSWIGAGSHLAVGQANGLVEIYDVMKRKCIRTLS 341
Query: 595 GHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654
GH RV L+WN +L+SGSRD IL RDVR P+ E + H QEVCGLKW+ + L
Sbjct: 342 GHIDRVACLSWNNHVLTSGSRDHRILHRDVRMPDPFFET-IESHTQEVCGLKWNVADNKL 400
Query: 655 ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL 714
ASGGNDN ++V+ S SP+ T+ EH AAVKA+AWSPH G+LA+GGGTADR ++ WN
Sbjct: 401 ASGGNDNVVHVYEGTSKSPILTFDEHKAAVKAMAWSPHKRGVLATGGGTADRRLKIWNVN 460
Query: 715 TGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLY 774
T M +D+GSQ+CN+ WSK+++ELV++HGYS+ + +W ++ +A L GHS+RVL+
Sbjct: 461 TSIKMSDIDSGSQICNMVWSKNTNELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLH 520
Query: 775 LAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKS-VLNLFSSIR 819
L +S DG +V+GAGDETLR+W +F K +++ + S + + F+ IR
Sbjct: 521 LTLSNDGTTVVSGAGDETLRYWKLFDKPKAKVQPNSLIFDAFNQIR 566
|
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). During telophase and in the subsequent G1 phase of the cell cycle, recognizes and binds proteins containing a destruction box (D-box) and an additional degradation signal termed the KEN box including ASE1, CDC20, the B-type cyclins CLB2 and CLB3, the polo-like kinase CDC5 and HSL1, and recruits them in a C-box-dependent manner to the APC/C for ubiquitination and subsequent proteolysis. Required for exit from mitosis, cytokinesis and formation of prereplicative complexes in G1. Probably is the target of a BUB2-dependent spindle checkpoint pathway. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 819 | ||||||
| 156537047 | 489 | PREDICTED: fizzy-related protein homolog | 0.542 | 0.907 | 0.828 | 0.0 | |
| 383856405 | 486 | PREDICTED: fizzy-related protein homolog | 0.588 | 0.991 | 0.786 | 0.0 | |
| 350417684 | 486 | PREDICTED: fizzy-related protein homolog | 0.590 | 0.995 | 0.779 | 0.0 | |
| 340728011 | 486 | PREDICTED: fizzy-related protein homolog | 0.588 | 0.991 | 0.782 | 0.0 | |
| 332018767 | 494 | Fizzy-related protein-like protein [Acro | 0.559 | 0.927 | 0.819 | 0.0 | |
| 307165943 | 494 | Fizzy-related protein-like protein [Camp | 0.540 | 0.896 | 0.835 | 0.0 | |
| 307212148 | 493 | Fizzy-related protein-like protein [Harp | 0.540 | 0.898 | 0.837 | 0.0 | |
| 322790516 | 494 | hypothetical protein SINV_04616 [Solenop | 0.540 | 0.896 | 0.837 | 0.0 | |
| 91077232 | 483 | PREDICTED: similar to retina aberrant in | 0.561 | 0.952 | 0.769 | 0.0 | |
| 194764131 | 478 | GF20850 [Drosophila ananassae] gi|190619 | 0.557 | 0.956 | 0.763 | 0.0 |
| >gi|156537047|ref|XP_001601463.1| PREDICTED: fizzy-related protein homolog [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/444 (82%), Positives = 404/444 (90%)
Query: 376 DRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIE 435
DR+IP+R G WQT FS I ++ VV KKTRE +GE SRDG+AY+CLL+NELLGA+IE
Sbjct: 46 DRFIPTRLGNNWQTTFSMISESNRTGVVNKKTRENNGEGSRDGIAYSCLLKNELLGASIE 105
Query: 436 GVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATR 495
VKGQC+E+R++ +NLF++ + + ++ TSPYSLSP+ KSQKLLRSPRKATR
Sbjct: 106 DVKGQCEERRILSPLAGKNLFKFTTPTKDKALLDQTSPYSLSPLSAKSQKLLRSPRKATR 165
Query: 496 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG 555
KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS DG
Sbjct: 166 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSGDG 225
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSR 615
NSVTSVAWNERGNLVAVGT+ GY+QVWDV+V KQV+KL GH+ARVGALAWNG++LSSGSR
Sbjct: 226 NSVTSVAWNERGNLVAVGTNLGYIQVWDVAVNKQVNKLQGHSARVGALAWNGEVLSSGSR 285
Query: 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675
DR+IL RDVRTP SER+L HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+Q
Sbjct: 286 DRLILLRDVRTPCLVSERKLGAHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPVQ 345
Query: 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 735
TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK
Sbjct: 346 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 405
Query: 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795
HSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF
Sbjct: 406 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 465
Query: 796 WNVFSKVRSQRESKSVLNLFSSIR 819
WNVFSK RSQ+E+KSVLNLF+SIR
Sbjct: 466 WNVFSKARSQKENKSVLNLFTSIR 489
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383856405|ref|XP_003703699.1| PREDICTED: fizzy-related protein homolog [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/483 (78%), Positives = 421/483 (87%), Gaps = 1/483 (0%)
Query: 337 EMEMENLATEDENTAPPLDLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPD 396
E E L + E+ L + S AY S S + DR+IP+R G WQT FS I +
Sbjct: 5 EYEKRLLKSNSESHIDSLAGSGLHSSAYFSPSKMMNNSFDRFIPTRSGNNWQTTFSMISE 64
Query: 397 NRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIEGVKGQCDEKRVIFSPDRRNLF 456
N +V KKTRE +GE++RDG+AY+CLL+NELLGA+IE VKGQC+E+R++ +NLF
Sbjct: 65 NSRNGIVTKKTRE-NGESNRDGIAYSCLLKNELLGASIEDVKGQCEERRILSPLVTKNLF 123
Query: 457 QYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL 516
+Y+ + ++ +SPYSLSP+ KSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL
Sbjct: 124 KYVTPTKDHTLLDQSSPYSLSPLSSKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL 183
Query: 517 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576
NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS+DGNSVTSVAWNERGNLVAVGTH
Sbjct: 184 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNSVTSVAWNERGNLVAVGTHL 243
Query: 577 GYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLV 636
GY+QVWDV+V+KQV KL GH+ARVGALAWNG++LSSGSRDR+ILQRDVRTP SERRL
Sbjct: 244 GYIQVWDVAVSKQVSKLQGHSARVGALAWNGEVLSSGSRDRLILQRDVRTPCVVSERRLG 303
Query: 637 GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGL 696
HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+QTYTEHLAAVKAIAWSPHHHGL
Sbjct: 304 AHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPVQTYTEHLAAVKAIAWSPHHHGL 363
Query: 697 LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756
LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY
Sbjct: 364 LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 423
Query: 757 PTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFS 816
P+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RSQ+E+KSVLNLF+
Sbjct: 424 PSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKARSQKENKSVLNLFT 483
Query: 817 SIR 819
SIR
Sbjct: 484 SIR 486
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350417684|ref|XP_003491543.1| PREDICTED: fizzy-related protein homolog [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/485 (77%), Positives = 421/485 (86%), Gaps = 1/485 (0%)
Query: 335 NNEMEMENLATEDENTAPPLDLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFI 394
++E E L + E+ L + Y S + + DR+IP+R G +QT FS I
Sbjct: 3 HHEYEKRLLKSSSESHIDSLASPGLHPSVYFSPTKMMNNSFDRFIPTRSGNNYQTTFSMI 62
Query: 395 PDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIEGVKGQCDEKRVIFSPDRRN 454
+N +V KKTRE +GE++RDG+AY+CLL+NELLGA+IE VKGQC+E+RV+ RN
Sbjct: 63 SENNRNGIVTKKTRE-NGESNRDGIAYSCLLKNELLGASIEDVKGQCEERRVLSPVVTRN 121
Query: 455 LFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDF 514
LF+Y+ + ++ +SPYSLSP+ KSQKLLRSPRKATRKISRIPFKVLDAPELQDDF
Sbjct: 122 LFKYITPTKDHTLLDQSSPYSLSPLSAKSQKLLRSPRKATRKISRIPFKVLDAPELQDDF 181
Query: 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT 574
YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS+DGNSVTSVAWNERGNLVAVGT
Sbjct: 182 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNSVTSVAWNERGNLVAVGT 241
Query: 575 HHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR 634
H GY+QVWDV+V+KQV KL GH+ARVGALAWNG++LSSGSRDR+ILQRDVRTP SERR
Sbjct: 242 HLGYIQVWDVAVSKQVSKLQGHSARVGALAWNGEVLSSGSRDRLILQRDVRTPCVVSERR 301
Query: 635 LVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694
L HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+QTYTEHLAAVKAIAWSPHHH
Sbjct: 302 LGAHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHH 361
Query: 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754
GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW
Sbjct: 362 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 421
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNL 814
KYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RSQ+E+KSVLNL
Sbjct: 422 KYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKARSQKENKSVLNL 481
Query: 815 FSSIR 819
F+SIR
Sbjct: 482 FTSIR 486
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340728011|ref|XP_003402326.1| PREDICTED: fizzy-related protein homolog [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/483 (78%), Positives = 419/483 (86%), Gaps = 1/483 (0%)
Query: 337 EMEMENLATEDENTAPPLDLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPD 396
E E L + E+ L + Y S + + DR+IP+R G +QT FS I +
Sbjct: 5 EYEKRLLKSNSESHIDSLASPGLHPSVYFSPTKMMNNSFDRFIPTRSGNNYQTTFSMISE 64
Query: 397 NRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIEGVKGQCDEKRVIFSPDRRNLF 456
N +V KKTRE +GE++RDG+AY+CLL+NELLGA+IE VKGQC+E+RV+ RNLF
Sbjct: 65 NNRNGIVTKKTRE-NGESNRDGIAYSCLLKNELLGASIEDVKGQCEERRVLSPVVTRNLF 123
Query: 457 QYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL 516
+Y+ + ++ +SPYSLSP+ KSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL
Sbjct: 124 KYITPTKDHTLLDQSSPYSLSPLSAKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL 183
Query: 517 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576
NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS+DGNSVTSVAWNERGNLVAVGTH
Sbjct: 184 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNSVTSVAWNERGNLVAVGTHL 243
Query: 577 GYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLV 636
GY+QVWDV+V+KQV KL GH+ARVGALAWNG++LSSGSRDR+ILQRDVRTP SERRL
Sbjct: 244 GYIQVWDVAVSKQVSKLQGHSARVGALAWNGEVLSSGSRDRLILQRDVRTPCVVSERRLG 303
Query: 637 GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGL 696
HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+QTYTEHLAAVKAIAWSPHHHGL
Sbjct: 304 AHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHHGL 363
Query: 697 LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756
LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY
Sbjct: 364 LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 423
Query: 757 PTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFS 816
P+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RSQ+E+KSVLNLF+
Sbjct: 424 PSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKARSQKENKSVLNLFT 483
Query: 817 SIR 819
SIR
Sbjct: 484 SIR 486
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332018767|gb|EGI59332.1| Fizzy-related protein-like protein [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/460 (81%), Positives = 409/460 (88%), Gaps = 2/460 (0%)
Query: 361 SPAYRS-TSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGL 419
SP Y S T DR+IP+R G WQT FS I +N +V KKTRE +GE SRDG+
Sbjct: 36 SPIYFSPTKTAYNNSYDRFIPTRSGNNWQTTFSMISENGRGGLVAKKTRE-NGEGSRDGI 94
Query: 420 AYTCLLRNELLGANIEGVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPV 479
AY+CLL+NELLGA+IE VKGQC+E+RV+ +NLF+Y + R ++ +SPYSLSP+
Sbjct: 95 AYSCLLKNELLGASIEDVKGQCEERRVLSPLVTKNLFKYTTPTKDRTLLDQSSPYSLSPL 154
Query: 480 GPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWS 539
KSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWS
Sbjct: 155 SAKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWS 214
Query: 540 ACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR 599
ACTSQVTRLCDLS+DGNSVTSVAWNERGNLVAVGTH GY+QVWDV+V KQV KL GH+AR
Sbjct: 215 ACTSQVTRLCDLSSDGNSVTSVAWNERGNLVAVGTHMGYIQVWDVAVNKQVSKLQGHSAR 274
Query: 600 VGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN 659
VGALAWNG++LSSGSRDR+ILQRDVRTP ERRL HRQEVCGLKWSPDNQYLASGGN
Sbjct: 275 VGALAWNGEVLSSGSRDRLILQRDVRTPCIVGERRLGAHRQEVCGLKWSPDNQYLASGGN 334
Query: 660 DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719
DNRLYVWNLHS+SP+QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM
Sbjct: 335 DNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 394
Query: 720 QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP 779
QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRVLYLAMSP
Sbjct: 395 QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSP 454
Query: 780 DGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
DGEAIVTGAGDETLRFWNVFSK RSQ+E+KSVLNLF+SIR
Sbjct: 455 DGEAIVTGAGDETLRFWNVFSKARSQKENKSVLNLFTSIR 494
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307165943|gb|EFN60270.1| Fizzy-related protein-like protein [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/444 (83%), Positives = 404/444 (90%), Gaps = 1/444 (0%)
Query: 376 DRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIE 435
DR+IP+R G WQT FS I +N +V KKTRE +GE +RDG+AY+CLL+NELLGA+IE
Sbjct: 52 DRFIPTRSGNNWQTTFSMISENGRGGLVAKKTRE-NGEGNRDGIAYSCLLKNELLGASIE 110
Query: 436 GVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATR 495
VKGQC+E+RV+ +NLF+Y + R ++ +SPYSLSP+ KSQKLLRSPRKATR
Sbjct: 111 DVKGQCEERRVLSPLVTKNLFKYTTPTKDRTLLDQSSPYSLSPLSAKSQKLLRSPRKATR 170
Query: 496 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG 555
KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS+DG
Sbjct: 171 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDG 230
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSR 615
NSVTSVAWNERGNLVAVGTH GY+QVWDV+V KQV KL GH+ARVGALAWNG++LSSGSR
Sbjct: 231 NSVTSVAWNERGNLVAVGTHMGYIQVWDVAVNKQVSKLQGHSARVGALAWNGEVLSSGSR 290
Query: 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675
DR+ILQRDVRTP ERRL HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+Q
Sbjct: 291 DRLILQRDVRTPCVVGERRLGAHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPIQ 350
Query: 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 735
TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK
Sbjct: 351 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 410
Query: 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795
HSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF
Sbjct: 411 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 470
Query: 796 WNVFSKVRSQRESKSVLNLFSSIR 819
WNVFSK RSQ+E+KSVLNLF+SIR
Sbjct: 471 WNVFSKARSQKENKSVLNLFTSIR 494
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307212148|gb|EFN88002.1| Fizzy-related protein-like protein [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/444 (83%), Positives = 403/444 (90%), Gaps = 1/444 (0%)
Query: 376 DRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIE 435
DR+IP+R G WQT FS I +N +V KKTRE +GE+SRDG+AY+CLL+NELLGA+IE
Sbjct: 51 DRFIPTRSGNNWQTTFSMISENGRGGLVAKKTRE-NGESSRDGIAYSCLLKNELLGASIE 109
Query: 436 GVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATR 495
VKGQC+E+RV+ RNLF+Y + R ++ +SPYSLSP+ KSQKLLRSPRKATR
Sbjct: 110 DVKGQCEERRVLSPLVTRNLFKYTTPTKDRTLLDQSSPYSLSPLSAKSQKLLRSPRKATR 169
Query: 496 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG 555
KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS+DG
Sbjct: 170 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDG 229
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSR 615
NSVTSVAWNERGNLVAVGTH GY+QVWDV V KQV KL GH+ARVGALAWNG++LSSGSR
Sbjct: 230 NSVTSVAWNERGNLVAVGTHMGYIQVWDVGVNKQVSKLQGHSARVGALAWNGEVLSSGSR 289
Query: 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675
DR+ILQRDVRTP ERRL HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+Q
Sbjct: 290 DRLILQRDVRTPCVVGERRLGAHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPIQ 349
Query: 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 735
TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ VDTGSQVCNLAWSK
Sbjct: 350 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQSVDTGSQVCNLAWSK 409
Query: 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795
HSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF
Sbjct: 410 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 469
Query: 796 WNVFSKVRSQRESKSVLNLFSSIR 819
WNVFSK RSQ+E+KSVLNLF+SIR
Sbjct: 470 WNVFSKARSQKENKSVLNLFTSIR 493
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322790516|gb|EFZ15378.1| hypothetical protein SINV_04616 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/444 (83%), Positives = 404/444 (90%), Gaps = 1/444 (0%)
Query: 376 DRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIE 435
DR+IP+R G WQT FS I +N +V KKTRE +GE SRDG+AY+CLL+NELLGA+IE
Sbjct: 52 DRFIPTRSGNNWQTTFSMISENGRGGLVAKKTRE-NGEGSRDGIAYSCLLKNELLGASIE 110
Query: 436 GVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATR 495
VKGQC+E+RV+ +NLF+Y + R ++ +SPYSLSP+ KSQKLLRSPRKATR
Sbjct: 111 DVKGQCEERRVLSPLVTKNLFKYTTPTKDRTLLDQSSPYSLSPLSAKSQKLLRSPRKATR 170
Query: 496 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG 555
KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS+DG
Sbjct: 171 KISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDG 230
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSR 615
NSVTSVAWNERGNLVAVGTH GY+QVWDV+V KQV KL GH+ARVGALAWNG++LSSGSR
Sbjct: 231 NSVTSVAWNERGNLVAVGTHMGYIQVWDVAVNKQVSKLQGHSARVGALAWNGEVLSSGSR 290
Query: 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675
DR+ILQRDVRTP ERRL HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS+SP+Q
Sbjct: 291 DRLILQRDVRTPCVVGERRLGAHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSLSPIQ 350
Query: 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 735
TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK
Sbjct: 351 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK 410
Query: 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795
HSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF
Sbjct: 411 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 470
Query: 796 WNVFSKVRSQRESKSVLNLFSSIR 819
WNVFSK RSQ+E+KSVLNLF+SIR
Sbjct: 471 WNVFSKARSQKENKSVLNLFTSIR 494
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91077232|ref|XP_968256.1| PREDICTED: similar to retina aberrant in pattern CG3000-PA isoform 1 [Tribolium castaneum] gi|270002085|gb|EEZ98532.1| hypothetical protein TcasGA2_TC001036 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/468 (76%), Positives = 398/468 (85%), Gaps = 8/468 (1%)
Query: 355 DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGET 414
DL+ + TSAN DR+IP R G W+T F+ +PD S KKTRE +GE
Sbjct: 21 DLFGAKTYQEPRTSAN----CDRFIPCRAGNNWETSFATLPDTNKNSQTGKKTRE-TGEN 75
Query: 415 SRDGLAYTCLLRNELLGANIEGVKGQCDEKRVIFSPDRRNLFQY-LPAPESRM--NIEAT 471
+RD Y LLRNEL G N E VK QCDE++V+ RNLF+Y P+ + N +
Sbjct: 76 TRDSSVYNILLRNELFGENTEDVKSQCDERQVLTPVKSRNLFRYGTPSKMEKTPTNKFQS 135
Query: 472 SPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGL 531
SPYS+SP+ SQ+LLRSP KATRKISRIPFKVLDAPELQDDFYLNLVDWS QNVLSVGL
Sbjct: 136 SPYSMSPLSVSSQRLLRSPHKATRKISRIPFKVLDAPELQDDFYLNLVDWSVQNVLSVGL 195
Query: 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591
GSCVYLWSACTSQVTRLCDLSADGN VTSVAW+ERG+LVAVGTHHGYV VWDVSV KQV+
Sbjct: 196 GSCVYLWSACTSQVTRLCDLSADGNVVTSVAWSERGHLVAVGTHHGYVTVWDVSVNKQVN 255
Query: 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651
KL GH+ARVGALAWNGD+LSSGSRDR+ILQRD RTP + +ERRLVGHRQEVCGLKWSPDN
Sbjct: 256 KLQGHSARVGALAWNGDVLSSGSRDRLILQRDTRTPPTVTERRLVGHRQEVCGLKWSPDN 315
Query: 652 QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711
QYLASGGNDNRLYVWN+ S+SP+QTYT+HLAAVKAIAWSPHHHGLLASGGGTADRCIRFW
Sbjct: 316 QYLASGGNDNRLYVWNMQSLSPVQTYTDHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 375
Query: 712 NTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR 771
NTLTGQPMQ VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYR
Sbjct: 376 NTLTGQPMQSVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYR 435
Query: 772 VLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
VLYLA+SPDGEAIVTGAGDETLRFWNVFSK RSQ+E++SVL+L++ IR
Sbjct: 436 VLYLALSPDGEAIVTGAGDETLRFWNVFSKARSQKETRSVLSLYTGIR 483
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194764131|ref|XP_001964185.1| GF20850 [Drosophila ananassae] gi|190619110|gb|EDV34634.1| GF20850 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/466 (76%), Positives = 393/466 (84%), Gaps = 9/466 (1%)
Query: 361 SPAYRSTSANLEVKA-----DRYIPSRCGEKWQTRFSFIPDNRTCSVVPKKTREVSGETS 415
SP R+ NLE DR+IP R WQT F+ I + S K + GET+
Sbjct: 15 SPVARNLFDNLESSTTPTSLDRFIPCRANNNWQTNFASINKSNDNSPQTSKKQRDCGETA 74
Query: 416 RDGLAYTCLLRNELLGANIEGVKGQCDEKRV-IFSPD-RRNLFQYLPAPESRMNIEATSP 473
RD LAY+CLL+NELLG+ I+ VK +E+ ++P +R+LF+Y + N E P
Sbjct: 75 RDSLAYSCLLKNELLGSAIDDVKTAGEERNENTYTPAAKRSLFKYQSPTKQDYNGEC--P 132
Query: 474 YSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGS 533
YSLSPV KSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVL+VGLGS
Sbjct: 133 YSLSPVSAKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLAVGLGS 192
Query: 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593
CVYLWSACTSQVTRLCDLS D N+VTSV+WNERGN VAVGTHHGYV VWDV+ KQ++KL
Sbjct: 193 CVYLWSACTSQVTRLCDLSPDANTVTSVSWNERGNTVAVGTHHGYVTVWDVAANKQINKL 252
Query: 594 VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY 653
GH+ARVGALAWN D+LSSGSRDR I+QRD RTP QSERRL GHRQEVCGLKWSPDNQY
Sbjct: 253 NGHSARVGALAWNSDILSSGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQY 312
Query: 654 LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713
LASGGNDNRLYVWN HS+SP+Q+YTEH+AAVKAIAWSPHHHGLLASGGGTADRCIRFWNT
Sbjct: 313 LASGGNDNRLYVWNQHSLSPVQSYTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 372
Query: 714 LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL 773
LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRVL
Sbjct: 373 LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVL 432
Query: 774 YLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
YLA+SPDGEAIVTGAGDETLRFWNVFSK RSQ+E+KSVLNLF++IR
Sbjct: 433 YLALSPDGEAIVTGAGDETLRFWNVFSKARSQKENKSVLNLFANIR 478
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 819 | ||||||
| FB|FBgn0262699 | 478 | rap "retina aberrant in patter | 0.556 | 0.953 | 0.760 | 1.1e-190 | |
| ZFIN|ZDB-GENE-040426-712 | 495 | fzr1 "fizzy/cell division cycl | 0.578 | 0.957 | 0.714 | 1.6e-182 | |
| UNIPROTKB|Q32L05 | 493 | FZR1 "Uncharacterized protein" | 0.577 | 0.959 | 0.713 | 5.4e-182 | |
| UNIPROTKB|Q5H7B9 | 493 | FZR1 "Uncharacterized protein" | 0.577 | 0.959 | 0.713 | 5.4e-182 | |
| MGI|MGI:1926790 | 493 | Fzr1 "fizzy/cell division cycl | 0.577 | 0.959 | 0.711 | 1.1e-181 | |
| UNIPROTKB|E2R4Z3 | 496 | FZR1 "Uncharacterized protein" | 0.577 | 0.953 | 0.707 | 2.7e-180 | |
| UNIPROTKB|Q9UM11 | 496 | FZR1 "Fizzy-related protein ho | 0.577 | 0.953 | 0.705 | 5.5e-180 | |
| UNIPROTKB|H9L1Y1 | 503 | Gga.913 "Uncharacterized prote | 0.557 | 0.908 | 0.675 | 1.3e-164 | |
| WB|WBGene00001510 | 702 | fzr-1 [Caenorhabditis elegans | 0.426 | 0.497 | 0.684 | 9.1e-141 | |
| TAIR|locus:2137030 | 475 | CCS52A2 "AT4G11920" [Arabidops | 0.549 | 0.947 | 0.538 | 8e-124 |
| FB|FBgn0262699 rap "retina aberrant in pattern" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1848 (655.6 bits), Expect = 1.1e-190, P = 1.1e-190
Identities = 355/467 (76%), Positives = 395/467 (84%)
Query: 361 SPAYRSTSANLE-----VKADRYIPSRCGEKWQTRFSFI-PDNRTCSVVPKKTREVSGET 414
SP R+ N E DR+IP R WQT F+ I N KK R+ GET
Sbjct: 15 SPVARNLFNNFESSTTPTSLDRFIPCRAYNNWQTNFASINKSNDNSPQTSKKQRDC-GET 73
Query: 415 SRDGLAYTCLLRNELLGANIEGVKGQCDEKRV-IFSPD-RRNLFQYLPAPESRMNIEATS 472
+RD LAY+CLL+NELLG+ I+ VK +E+ ++P +R+LF+Y +P ++ +
Sbjct: 74 ARDSLAYSCLLKNELLGSAIDDVKTAGEERNENAYTPAAKRSLFKY-QSP-TKQDYNGEC 131
Query: 473 PYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLG 532
PYSLSPV KSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVL+VGLG
Sbjct: 132 PYSLSPVSAKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLAVGLG 191
Query: 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592
SCVYLWSACTSQVTRLCDLS D N+VTSV+WNERGN VAVGTHHGYV VWDV+ KQ++K
Sbjct: 192 SCVYLWSACTSQVTRLCDLSPDANTVTSVSWNERGNTVAVGTHHGYVTVWDVAANKQINK 251
Query: 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652
L GH+ARVGALAWN D+LSSGSRDR I+QRD RTP QSERRL GHRQEVCGLKWSPDNQ
Sbjct: 252 LNGHSARVGALAWNSDILSSGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQ 311
Query: 653 YLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712
YLASGGNDNRLYVWN HS++P+Q+YTEH+AAVKAIAWSPHHHGLLASGGGTADRCIRFWN
Sbjct: 312 YLASGGNDNRLYVWNQHSVNPVQSYTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 371
Query: 713 TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRV 772
TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP+LTQVAKLTGHSYRV
Sbjct: 372 TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRV 431
Query: 773 LYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
LYLA+SPDGEAIVTGAGDETLRFWNVFSK RSQ+E+KSVLNLF++IR
Sbjct: 432 LYLALSPDGEAIVTGAGDETLRFWNVFSKARSQKENKSVLNLFANIR 478
|
|
| ZFIN|ZDB-GENE-040426-712 fzr1 "fizzy/cell division cycle 20 related 1 (Drosophila)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1771 (628.5 bits), Expect = 1.6e-182, P = 1.6e-182
Identities = 343/480 (71%), Positives = 392/480 (81%)
Query: 346 EDENTAP--PLDLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVV 403
+++NT+P D+ ++P S ++ DR+IPSR G W F I +N
Sbjct: 16 QNDNTSPMKAKDVICHLTPTPESPLSSPSKHGDRFIPSRAGANWSINFHRINENEKSPSQ 75
Query: 404 PKKTREVSGETSR-DGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-L 459
KKT++ + ++ + DGLAY+ LL+NELLGA IE V Q +++R+ S P+RR+LF Y L
Sbjct: 76 NKKTKDATSDSGKADGLAYSALLKNELLGAGIEKVLDPQTEDRRLQPSTPERRSLFSYSL 135
Query: 460 PAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLV 519
A S + + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLV
Sbjct: 136 SAKRSTPDDNSVSPYSLSPVSSKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLV 195
Query: 520 DWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYV 579
DWSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAVGTH G+V
Sbjct: 196 DWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFV 255
Query: 580 QVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR 639
Q+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QSERRL GHR
Sbjct: 256 QIWDATAGKKLFALEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHR 315
Query: 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLAS 699
QEVCGLKWS D+Q LASGGNDN+L VWN S+ P+Q YTEHLAAVKAIAWSPH HGLLAS
Sbjct: 316 QEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPMQQYTEHLAAVKAIAWSPHQHGLLAS 375
Query: 700 GGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759
GGGTADRCIRFWNTLT QP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+L
Sbjct: 376 GGGTADRCIRFWNTLTAQPLQCIDTGSQVCNLAWSKHTNELVSTHGYSQNQILVWKYPSL 435
Query: 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS +ES SVLNLF+ IR
Sbjct: 436 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKESVSVLNLFTRIR 495
|
|
| UNIPROTKB|Q32L05 FZR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1766 (626.7 bits), Expect = 5.4e-182, P = 5.4e-182
Identities = 342/479 (71%), Positives = 391/479 (81%)
Query: 346 EDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVP 404
++ENT P + ++ ++PA S+ + DR+IPSR G W F I +N
Sbjct: 16 QNENTMPCVAEMRRTLTPANSPVSSPSK-HGDRFIPSRAGANWSVNFHRINENEKSPSQN 74
Query: 405 KKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-LPA 461
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+R+ LF Y L
Sbjct: 75 RKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPERKGLFTYSLST 134
Query: 462 PESRMNI-EATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVD 520
S + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLVD
Sbjct: 135 KRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVD 194
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAVGTH G+VQ
Sbjct: 195 WSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQ 254
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QSERRL GHRQ
Sbjct: 255 IWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQ 314
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
EVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH HGLLASG
Sbjct: 315 EVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASG 374
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
GGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+LT
Sbjct: 375 GGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLT 434
Query: 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS +ES SVLNLF+ IR
Sbjct: 435 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKESVSVLNLFTRIR 493
|
|
| UNIPROTKB|Q5H7B9 FZR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1766 (626.7 bits), Expect = 5.4e-182, P = 5.4e-182
Identities = 342/479 (71%), Positives = 391/479 (81%)
Query: 346 EDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVP 404
++ENT P + ++ ++PA S+ + DR+IPSR G W F I +N
Sbjct: 16 QNENTMPCVAEMRRTLTPANSPVSSPSK-HGDRFIPSRAGANWSVNFHRINENEKSPSQN 74
Query: 405 KKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-LPA 461
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+R+ LF Y L
Sbjct: 75 RKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPERKGLFTYSLST 134
Query: 462 PESRMNI-EATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVD 520
S + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLVD
Sbjct: 135 KRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVD 194
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAVGTH G+VQ
Sbjct: 195 WSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQ 254
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QSERRL GHRQ
Sbjct: 255 IWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQ 314
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
EVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH HGLLASG
Sbjct: 315 EVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASG 374
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
GGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+LT
Sbjct: 375 GGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLT 434
Query: 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS +ES SVLNLF+ IR
Sbjct: 435 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKESVSVLNLFTRIR 493
|
|
| MGI|MGI:1926790 Fzr1 "fizzy/cell division cycle 20 related 1 (Drosophila)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1763 (625.7 bits), Expect = 1.1e-181, P = 1.1e-181
Identities = 341/479 (71%), Positives = 391/479 (81%)
Query: 346 EDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVP 404
++ENT P + ++ ++PA S+ + DR+IPSR G W F I +N
Sbjct: 16 QNENTVPCVSEMRRTLTPANSPVSSPSK-HGDRFIPSRAGANWSVNFHRINENEKSPSQN 74
Query: 405 KKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-LPA 461
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+ + LF Y L +
Sbjct: 75 RKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEHKGLFTYSLSS 134
Query: 462 PESRMNI-EATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVD 520
S + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLVD
Sbjct: 135 KRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVD 194
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAVGTH G+VQ
Sbjct: 195 WSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQ 254
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QSERRL GHRQ
Sbjct: 255 IWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQ 314
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
EVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH HGLLASG
Sbjct: 315 EVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASG 374
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
GGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+LT
Sbjct: 375 GGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLT 434
Query: 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS +ES SVLNLF+ IR
Sbjct: 435 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKESVSVLNLFTRIR 493
|
|
| UNIPROTKB|E2R4Z3 FZR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1750 (621.1 bits), Expect = 2.7e-180, P = 2.7e-180
Identities = 341/482 (70%), Positives = 391/482 (81%)
Query: 346 EDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVP 404
++ENT P + ++ ++PA S+ + DR+IPSR G W F I +N
Sbjct: 16 QNENTMPCVAEMRRTLTPANSPVSSPSK-HGDRFIPSRAGANWSVNFHRINENEKSPSQN 74
Query: 405 KKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-LPA 461
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+++ LF Y L
Sbjct: 75 RKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKGLFTYSLST 134
Query: 462 PESRMNI-EATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVD 520
S + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLVD
Sbjct: 135 KRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVD 194
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAVGTH G+VQ
Sbjct: 195 WSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQ 254
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QSERRL GHRQ
Sbjct: 255 IWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQ 314
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
EVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH HGLLASG
Sbjct: 315 EVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASG 374
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
GGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+LT
Sbjct: 375 GGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLT 434
Query: 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR---ESKSVLNLFSS 817
QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS + ES SVLNLF+
Sbjct: 435 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKVKWESVSVLNLFTR 494
Query: 818 IR 819
IR
Sbjct: 495 IR 496
|
|
| UNIPROTKB|Q9UM11 FZR1 "Fizzy-related protein homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1747 (620.0 bits), Expect = 5.5e-180, P = 5.5e-180
Identities = 340/482 (70%), Positives = 391/482 (81%)
Query: 346 EDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVP 404
++ENT P + ++ ++PA S+ + DR+IPSR G W F I +N
Sbjct: 16 QNENTMPRVTEMRRTLTPASSPVSSPSK-HGDRFIPSRAGANWSVNFHRINENEKSPSQN 74
Query: 405 KKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-LPA 461
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P+++ LF Y L
Sbjct: 75 RKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKGLFTYSLST 134
Query: 462 PESRMNI-EATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVD 520
S + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLVD
Sbjct: 135 KRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVD 194
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERGNLVAVGTH G+VQ
Sbjct: 195 WSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQ 254
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
+WD + K++ L GHTARVGALAWN + LSSGSRDRMILQRD+RTP QSERRL GHRQ
Sbjct: 255 IWDAAAGKKLSMLEGHTARVGALAWNAEQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQ 314
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
EVCGLKWS D+Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH HGLLASG
Sbjct: 315 EVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASG 374
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
GGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+LT
Sbjct: 375 GGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLT 434
Query: 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR---ESKSVLNLFSS 817
QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS + ES SVLNLF+
Sbjct: 435 QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKVKWESVSVLNLFTR 494
Query: 818 IR 819
IR
Sbjct: 495 IR 496
|
|
| UNIPROTKB|H9L1Y1 Gga.913 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
Identities = 316/468 (67%), Positives = 367/468 (78%)
Query: 346 EDENTAPPL-DLYDIMSPAYRSTSANLEVKADRYIPSRCGEKWQTRFSFIPDNRTCSVVP 404
++ENT P + ++ ++P+ S ++ DR+IPSR G W F I +N
Sbjct: 16 QNENTMPCVAEMRRTLTPS-NSPMSSPSKHGDRFIPSRAGANWSINFHRINENEKSPSQN 74
Query: 405 KKTREVSGETSRDGLAYTCLLRNELLGANIEGVKG-QCDEKRVIFS-PDRRNLFQY-LPA 461
+K ++ + + +DGLAY+ LL+NELLGA IE V+ Q +++R+ S P++++LF Y L
Sbjct: 75 RKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKSLFTYSLST 134
Query: 462 PESRMNI-EATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVD 520
S + SPYSLSPV KSQKLLRSPRK TRKIS+IPFKVLDAPELQDDFYLNLVD
Sbjct: 135 KRSSPDDGNEVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVD 194
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSS NVLSVGLG+CVYLWSACTSQVTRLCDLS +G+SVTSV W+ERG LVAVGTH G+VQ
Sbjct: 195 WSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGTLVAVGTHKGFVQ 254
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSE--RRLVGH 638
+WD + K++ L GHTARVGALAWN D LSSGSRDRMILQRD+RTP QS R G
Sbjct: 255 IWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSSGGSRATGR 314
Query: 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698
R G +Q LASGGNDN+L VWN S+SP+Q YTEHLAAVKAIAWSPH HGLLA
Sbjct: 315 RS--VGSS-GRQHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLA 371
Query: 699 SGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758
SGGGTADRCIRFWNTLTGQP+QC+DTGSQVCNLAWSKH++ELVSTHGYSQNQILVWKYP+
Sbjct: 372 SGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPS 431
Query: 759 LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806
LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK RS +
Sbjct: 432 LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTK 479
|
|
| WB|WBGene00001510 fzr-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1318 (469.0 bits), Expect = 9.1e-141, Sum P(3) = 9.1e-141
Identities = 241/352 (68%), Positives = 283/352 (80%)
Query: 470 ATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSV 529
ATSP+ P G SQ+LLR+PRK RK+ + P+KVLDAPELQDDFYLNLVDWSSQN LSV
Sbjct: 352 ATSPFG-GPFGVDSQRLLRTPRKPIRKVPKNPYKVLDAPELQDDFYLNLVDWSSQNQLSV 410
Query: 530 GLGSCVYLWSACTSQVTRLCDLSA--DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA 587
GL +CVYLWSA TSQV +LCDL + + VTSV W ++G+L+AVGT G Q+WDV+
Sbjct: 411 GLAACVYLWSATTSQVIKLCDLGQTNEQDQVTSVQWCDKGDLLAVGTSRGVTQIWDVTTQ 470
Query: 588 KQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKW 647
K+ +L GH++RVG LAWN D + SGSRDR I+ RD+R ++ R+L HRQEVCGLKW
Sbjct: 471 KKTRELTGHSSRVGCLAWNADTICSGSRDRTIMHRDIRCDDNDMGRKLTNHRQEVCGLKW 530
Query: 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707
SPD Q LASGGNDN+L VWNL P+QTYT+H AAVKA+AWSPHHHGLL SGGGTADRC
Sbjct: 531 SPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHHHGLLVSGGGTADRC 590
Query: 708 IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767
+RFWNTLT QPMQCVDTGSQVCN+AWSKHSSELVSTHGYS N +++WKYP+L V KL G
Sbjct: 591 LRFWNTLTAQPMQCVDTGSQVCNVAWSKHSSELVSTHGYSFNHVIIWKYPSLQPVTKLVG 650
Query: 768 HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNLFSSIR 819
H YRVLYLAMSPDGE+IVTGAGDETLRFW+VF+K ++S LNL S+IR
Sbjct: 651 HQYRVLYLAMSPDGESIVTGAGDETLRFWHVFNKGNPPTITRSKLNLHSTIR 702
|
|
| TAIR|locus:2137030 CCS52A2 "AT4G11920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
Identities = 256/475 (53%), Positives = 319/475 (67%)
Query: 346 EDENTAPPL--DLYDIMSPAYRSTSANLEVKADRYIPSR-CGEKWQTRFS--FIPDNRTC 400
EDE+T P D + P+ + +LE + +R I S + +S FIP +R+
Sbjct: 3 EDESTTPKKKSDSQLNLPPSMNRPTVSLESRINRLIDSNHYHSPSKPIYSDRFIP-SRSG 61
Query: 401 SVVPKKTREVSGETSRDGL-----AYTCLLRNELLGANIEGVKGQCDEKRVIFSPDRRNL 455
S S +DG +Y LL+ L G V + + FSP N+
Sbjct: 62 SNFALFDLASSSPNKKDGKEDGAGSYASLLKTALFGP----VTPEKSDVVNGFSPSG-NI 116
Query: 456 FQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFY 515
F++ E++ ++ P+ V S SP K+ RKI R P+KVLDAP LQDDFY
Sbjct: 117 FRF--KTETQRSLNLYPPFDSDVVSGVSP----SPVKSPRKILRSPYKVLDAPALQDDFY 170
Query: 516 LNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH 575
LNLVDWS+QNVL+VGLG+CVYLW+AC+S+VT+LCDL D +V SV W RG +A+GT
Sbjct: 171 LNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGVD-ETVCSVGWALRGTHLAIGTS 229
Query: 576 HGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRL 635
G VQ+WDV K + + GH RVGALAW+ +LSSGSRD+ ILQRD+RT + L
Sbjct: 230 SGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRTQEDHVSK-L 288
Query: 636 VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHG 695
GH+ E+CGLKWS DN+ LASGGNDN+L+VWN HS P+ + EH AAVKAIAWSPHH G
Sbjct: 289 KGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFG 348
Query: 696 LLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWK 755
LLASGGGTADRCIRFWNT T + CVDT SQVCNL WSK+ +ELVSTHGYSQNQI+VWK
Sbjct: 349 LLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWK 408
Query: 756 YPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ-RESK 809
YPT++++A LTGHSYRVLYLA+SPDG+ IVTGAGDETLRFWNVF +SQ RES+
Sbjct: 409 YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRESE 463
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9UM11 | FZR_HUMAN | No assigned EC number | 0.6877 | 0.5824 | 0.9616 | yes | N/A |
| Q8L3Z8 | FZR2_ARATH | No assigned EC number | 0.5617 | 0.5079 | 0.8612 | yes | N/A |
| Q54KM3 | CDH1_DICDI | No assigned EC number | 0.5714 | 0.4151 | 0.4509 | yes | N/A |
| Q9R1K5 | FZR_MOUSE | No assigned EC number | 0.6967 | 0.5811 | 0.9655 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 819 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-41 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-39 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-36 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-35 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-27 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-20 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 4e-15 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 3e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 4e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 6e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-04 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 0.001 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 8e-41
Identities = 85/288 (29%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 519 VDWSSQN--VLSVGLGSCVYLWSACTSQV-TRLCDLSADGNSVTSVAWNERGNLVAVGTH 575
V +S + + + +W T ++ L + V + A G +A G+
Sbjct: 15 VAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASAD---GTYLASGSS 71
Query: 576 HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER 633
+++WD+ + V L GHT+ V ++A+ +G +LSS SRD+ I DV T +
Sbjct: 72 DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG--KCLT 129
Query: 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHH 693
L GH V + +SPD ++AS D + +W+L + + T T H V ++A+SP
Sbjct: 130 TLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDG 189
Query: 694 HGLLASGGGTADRCIRFWNTLTGQPMQCVDT----GSQVCNLAWSKHSSELVSTHGYSQN 749
LL+S D I+ W+ TG+ C+ T + V ++A+S L S G
Sbjct: 190 EKLLSSSS---DGTIKLWDLSTGK---CLGTLRGHENGVNSVAFSPDGYLLAS--GSEDG 241
Query: 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
I VW T V L+GH+ V LA SPDG+ + +G+ D T+R W+
Sbjct: 242 TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-39
Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 12/254 (4%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSG 613
VT VA++ G L+A G+ G ++VWD+ + + L GHT V +A +G L+SG
Sbjct: 10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASG 69
Query: 614 SRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP 673
S D+ I D+ T + R L GH V + +SPD + L+S D + VW++ +
Sbjct: 70 SSDKTIRLWDLETG--ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKC 127
Query: 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNL 731
L T H V ++A+SP +AS D I+ W+ TG+ + TG +V ++
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGT-FVASSS--QDGTIKLWDLRTGKCVA-TLTGHTGEVNSV 183
Query: 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
A+S +L+S S I +W T + L GH V +A SPDG + +G+ D
Sbjct: 184 AFSPDGEKLLS--SSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDG 241
Query: 792 TLRFWNVFSKVRSQ 805
T+R W++ + Q
Sbjct: 242 TIRVWDLRTGECVQ 255
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 144 bits (362), Expect = 1e-36
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 15/313 (4%)
Query: 515 YLNLVDWSSQN---VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571
+ + +S L + LW T + L+ + V+S+A++ G L+
Sbjct: 157 SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLST--LAGHTDPVSSLAFSPDGGLLI 214
Query: 572 VGTHH-GYVQVWDVSVAKQVH-KLVGHTAR-VGALAWNGDMLSSGSRDRMILQRDVRTPN 628
G +++WD+S K + L GH+ V + + +G +L+SGS D I D+R+ +
Sbjct: 215 ASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRS-S 273
Query: 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ--TYTEHLAAVKA 686
S R L GH V + +SPD + LASG +D + +W+L + L T H V +
Sbjct: 274 SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSS 333
Query: 687 IAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746
+++SP L++ GG+ D IR W+ TG+P++ ++ S V ++++S V + G
Sbjct: 334 LSFSPDGSLLVS--GGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPD--GRVVSSGS 389
Query: 747 SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806
+ + +W T + + L GH+ RV L SPDG+++ +G+ D T+R W++ + ++S
Sbjct: 390 TDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVS 449
Query: 807 ESKSVLNLFSSIR 819
S L S
Sbjct: 450 FSPDGKVLASKSS 462
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 7e-35
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 590 VHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKW 647
L GHT V +A++ G +L++GS D I D+ T + R L GH V +
Sbjct: 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG--ELLRTLKGHTGPVRDVAA 59
Query: 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707
S D YLASG +D + +W+L + ++T T H + V ++A+SP +L+S D+
Sbjct: 60 SADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGR-ILSSSS--RDKT 116
Query: 708 IRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT 766
I+ W+ TG+ + + V ++A+S V++ I +W T VA LT
Sbjct: 117 IKVWDVETGKCLTTLRGHTDWVNSVAFS-PDGTFVAS-SSQDGTIKLWDLRTGKCVATLT 174
Query: 767 GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
GH+ V +A SPDGE +++ + D T++ W++
Sbjct: 175 GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDL 206
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 4e-27
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWS 690
R L GH V + +SPD + LA+G D + VW+L + L+T H V+ +A S
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60
Query: 691 PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT----GSQVCNLAWSKHSSELVSTHGY 746
L + D+ IR W+ TG +CV T S V ++A+S L S
Sbjct: 61 ADGTYLASGSS---DKTIRLWDLETG---ECVRTLTGHTSYVSSVAFSPDGRILSS--SS 112
Query: 747 SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
I VW T + L GH+ V +A SPDG + + + D T++ W++
Sbjct: 113 RDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDL 164
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 95.9 bits (237), Expect = 1e-20
Identities = 85/337 (25%), Positives = 144/337 (42%), Gaps = 23/337 (6%)
Query: 477 SPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVY 536
S G LL + +S + + +D + +LS +
Sbjct: 36 SESGILLLALLSDSLVSLPDLSSLLLR-----GHEDSITSIAFSPDGELLLSGSSDGTIK 90
Query: 537 LWSACTSQVTRLCDLSADGNSVTSVAW---NERGNLVAVGTHHGYVQVWDVS-VAKQVHK 592
LW + +SV+ +A + L+A + G V++WD+S K +
Sbjct: 91 LWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRT 150
Query: 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650
L GH+ V +LA+ +G +L+SGS + + + L GH V L +SPD
Sbjct: 151 LEGHSESVTSLAFSPDGKLLASGSSLDGTI-KLWDLRTGKPLSTLAGHTDPVSSLAFSPD 209
Query: 651 NQ-YLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709
+ASG +D + +W+L + L++ + ++SP LLASG +D IR
Sbjct: 210 GGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGS-LLASGS--SDGTIR 266
Query: 710 FWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT- 766
W+ + + +G S V ++A+S L S G S + +W T ++ LT
Sbjct: 267 LWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS--GSSDGTVRLWDLETGKLLSSLTL 324
Query: 767 -GHSYRVLYLAMSPDGEAIVTGAG-DETLRFWNVFSK 801
GH V L+ SPDG +V+G D T+R W++ +
Sbjct: 325 KGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG 361
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 78.2 bits (191), Expect = 4e-15
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 11/226 (4%)
Query: 601 GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660
+L G S ++ V P+ S L GH + + +SPD + L SG +D
Sbjct: 28 LSLLSLGSSESGILLLALLSDSLVSLPDLSS-LLLRGHEDSITSIAFSPDGELLLSGSSD 86
Query: 661 NRLYVWNLHSMSPL--QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN--TLTG 716
+ +W+L + L H ++V +A S + + D ++ W+ T
Sbjct: 87 GTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK 146
Query: 717 QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA 776
V +LA+S L S I +W T ++ L GH+ V LA
Sbjct: 147 LIRTLEGHSESVTSLAFSPDGKLLASGSSLD-GTIKLWDLRTGKPLSTLAGHTDPVSSLA 205
Query: 777 MSPDGEAIVTGAG-DETLRFWNVFSKVRSQR----ESKSVLNLFSS 817
SPDG ++ D T+R W++ + + S SV++ FS
Sbjct: 206 FSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP 251
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 3e-07
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 630 QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
+ R L GH V + +SPD LASG +D + VW+
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-07
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
+ + + L GH V + +SPD +YLASG +D + +W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 6e-05
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 758 TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
+ + L GH+ V +A SPDG+ + +G+ D T++ W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
+ L GH+ V +A SPDG + +G+ D T+R W+
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 1e-04
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712
L+T H V ++A+SP + LLASG D +R W+
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGN-LLASGS--DDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712
S L+T H V ++A+SP LASG D I+ W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGK-YLASGS--DDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 0.001
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 25/196 (12%)
Query: 622 RDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL----ASGGNDNRLYVWNLHSMSPLQTY 677
RD+ P + + R ++ G+ W N Y+ AS + + VW++ +
Sbjct: 520 RDIHYPVVE-----LASRSKLSGICW---NSYIKSQVASSNFEGVVQVWDVARSQLVTEM 571
Query: 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHS 737
EH V +I +S LLAS G+ D ++ W+ G + + T + +C + + S
Sbjct: 572 KEHEKRVWSIDYSSADPTLLAS--GSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSES 629
Query: 738 SELVSTHGYSQNQILVW-----KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDET 792
++ G + +++ + K P T + GHS V Y+ D +V+ + D T
Sbjct: 630 GRSLA-FGSADHKVYYYDLRNPKLPLCTMI----GHSKTVSYVRFV-DSSTLVSSSTDNT 683
Query: 793 LRFWNVFSKVRSQRES 808
L+ W++ + E+
Sbjct: 684 LKLWDLSMSISGINET 699
|
Length = 793 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 819 | |||
| KOG0305|consensus | 484 | 100.0 | ||
| KOG0650|consensus | 733 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0315|consensus | 311 | 99.98 | ||
| KOG0284|consensus | 464 | 99.97 | ||
| KOG0295|consensus | 406 | 99.97 | ||
| KOG0291|consensus | 893 | 99.97 | ||
| KOG0263|consensus | 707 | 99.97 | ||
| KOG0266|consensus | 456 | 99.97 | ||
| KOG0265|consensus | 338 | 99.97 | ||
| KOG0273|consensus | 524 | 99.97 | ||
| KOG0281|consensus | 499 | 99.97 | ||
| KOG0291|consensus | 893 | 99.97 | ||
| PF08145 | 260 | BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR01295 | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG0296|consensus | 399 | 99.96 | ||
| KOG0645|consensus | 312 | 99.96 | ||
| KOG0295|consensus | 406 | 99.96 | ||
| KOG0279|consensus | 315 | 99.96 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0286|consensus | 343 | 99.96 | ||
| KOG0318|consensus | 603 | 99.96 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG0263|consensus | 707 | 99.96 | ||
| KOG0319|consensus | 775 | 99.96 | ||
| KOG0266|consensus | 456 | 99.96 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0318|consensus | 603 | 99.96 | ||
| KOG0315|consensus | 311 | 99.96 | ||
| KOG0284|consensus | 464 | 99.95 | ||
| KOG0293|consensus | 519 | 99.95 | ||
| KOG0278|consensus | 334 | 99.95 | ||
| KOG0274|consensus | 537 | 99.95 | ||
| KOG0316|consensus | 307 | 99.95 | ||
| KOG0316|consensus | 307 | 99.95 | ||
| KOG0281|consensus | 499 | 99.95 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| KOG0306|consensus | 888 | 99.95 | ||
| KOG0276|consensus | 794 | 99.94 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.94 | |
| KOG0282|consensus | 503 | 99.94 | ||
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0313|consensus | 423 | 99.94 | ||
| KOG0275|consensus | 508 | 99.94 | ||
| KOG0276|consensus | 794 | 99.94 | ||
| KOG0292|consensus | 1202 | 99.93 | ||
| KOG0265|consensus | 338 | 99.93 | ||
| KOG0288|consensus | 459 | 99.93 | ||
| KOG0645|consensus | 312 | 99.93 | ||
| KOG0283|consensus | 712 | 99.93 | ||
| KOG0310|consensus | 487 | 99.93 | ||
| KOG0277|consensus | 311 | 99.93 | ||
| KOG0643|consensus | 327 | 99.93 | ||
| KOG0282|consensus | 503 | 99.93 | ||
| KOG0292|consensus | 1202 | 99.92 | ||
| KOG0294|consensus | 362 | 99.92 | ||
| KOG0306|consensus | 888 | 99.92 | ||
| KOG0289|consensus | 506 | 99.92 | ||
| KOG0313|consensus | 423 | 99.92 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.92 | |
| KOG0296|consensus | 399 | 99.91 | ||
| KOG1446|consensus | 311 | 99.91 | ||
| KOG0640|consensus | 430 | 99.91 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.91 | |
| KOG1446|consensus | 311 | 99.91 | ||
| KOG0310|consensus | 487 | 99.91 | ||
| KOG0973|consensus | 942 | 99.91 | ||
| KOG1407|consensus | 313 | 99.91 | ||
| KOG0277|consensus | 311 | 99.91 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| KOG1408|consensus | 1080 | 99.9 | ||
| KOG0275|consensus | 508 | 99.9 | ||
| KOG1407|consensus | 313 | 99.9 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.9 | |
| KOG0293|consensus | 519 | 99.9 | ||
| KOG0274|consensus | 537 | 99.9 | ||
| KOG0301|consensus | 745 | 99.9 | ||
| KOG0268|consensus | 433 | 99.89 | ||
| KOG0973|consensus | 942 | 99.89 | ||
| KOG0772|consensus | 641 | 99.89 | ||
| KOG0308|consensus | 735 | 99.89 | ||
| KOG0288|consensus | 459 | 99.89 | ||
| KOG0264|consensus | 422 | 99.89 | ||
| KOG1539|consensus | 910 | 99.89 | ||
| KOG0299|consensus | 479 | 99.89 | ||
| KOG0300|consensus | 481 | 99.88 | ||
| KOG0646|consensus | 476 | 99.88 | ||
| KOG0268|consensus | 433 | 99.88 | ||
| KOG0305|consensus | 484 | 99.87 | ||
| KOG0641|consensus | 350 | 99.87 | ||
| KOG0308|consensus | 735 | 99.87 | ||
| KOG0264|consensus | 422 | 99.87 | ||
| KOG1332|consensus | 299 | 99.87 | ||
| KOG1274|consensus | 933 | 99.87 | ||
| KOG0639|consensus | 705 | 99.86 | ||
| KOG0647|consensus | 347 | 99.86 | ||
| KOG0643|consensus | 327 | 99.86 | ||
| KOG0647|consensus | 347 | 99.86 | ||
| KOG0278|consensus | 334 | 99.86 | ||
| KOG0299|consensus | 479 | 99.86 | ||
| KOG1036|consensus | 323 | 99.86 | ||
| KOG2106|consensus | 626 | 99.86 | ||
| KOG0641|consensus | 350 | 99.86 | ||
| KOG0269|consensus | 839 | 99.85 | ||
| KOG0283|consensus | 712 | 99.85 | ||
| KOG1036|consensus | 323 | 99.85 | ||
| KOG1274|consensus | 933 | 99.85 | ||
| KOG1332|consensus | 299 | 99.84 | ||
| KOG0300|consensus | 481 | 99.84 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.83 | |
| KOG0269|consensus | 839 | 99.83 | ||
| KOG0321|consensus | 720 | 99.83 | ||
| KOG0289|consensus | 506 | 99.83 | ||
| KOG0639|consensus | 705 | 99.83 | ||
| KOG4283|consensus | 397 | 99.83 | ||
| KOG4378|consensus | 673 | 99.83 | ||
| KOG0267|consensus | 825 | 99.82 | ||
| KOG0640|consensus | 430 | 99.82 | ||
| KOG2048|consensus | 691 | 99.82 | ||
| KOG0301|consensus | 745 | 99.81 | ||
| KOG2096|consensus | 420 | 99.81 | ||
| KOG0646|consensus | 476 | 99.8 | ||
| KOG0267|consensus | 825 | 99.8 | ||
| KOG2055|consensus | 514 | 99.8 | ||
| KOG0270|consensus | 463 | 99.8 | ||
| KOG2445|consensus | 361 | 99.8 | ||
| KOG4283|consensus | 397 | 99.8 | ||
| KOG1273|consensus | 405 | 99.8 | ||
| KOG0294|consensus | 362 | 99.79 | ||
| KOG0772|consensus | 641 | 99.79 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.79 | |
| KOG0270|consensus | 463 | 99.79 | ||
| KOG1408|consensus | 1080 | 99.79 | ||
| KOG2048|consensus | 691 | 99.78 | ||
| KOG4378|consensus | 673 | 99.78 | ||
| KOG4328|consensus | 498 | 99.78 | ||
| KOG2106|consensus | 626 | 99.78 | ||
| KOG0302|consensus | 440 | 99.77 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.76 | |
| KOG0302|consensus | 440 | 99.76 | ||
| KOG0307|consensus | 1049 | 99.76 | ||
| KOG4328|consensus | 498 | 99.76 | ||
| KOG0307|consensus | 1049 | 99.76 | ||
| KOG1539|consensus | 910 | 99.75 | ||
| KOG0642|consensus | 577 | 99.74 | ||
| KOG1063|consensus | 764 | 99.74 | ||
| KOG1063|consensus | 764 | 99.74 | ||
| KOG1188|consensus | 376 | 99.73 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.72 | |
| KOG2055|consensus | 514 | 99.72 | ||
| KOG1009|consensus | 434 | 99.72 | ||
| KOG1034|consensus | 385 | 99.72 | ||
| KOG1587|consensus | 555 | 99.72 | ||
| KOG0650|consensus | 733 | 99.71 | ||
| KOG1538|consensus | 1081 | 99.71 | ||
| KOG1445|consensus | 1012 | 99.71 | ||
| KOG2919|consensus | 406 | 99.7 | ||
| KOG0303|consensus | 472 | 99.69 | ||
| KOG2445|consensus | 361 | 99.69 | ||
| KOG0321|consensus | 720 | 99.69 | ||
| KOG2096|consensus | 420 | 99.69 | ||
| KOG2919|consensus | 406 | 99.66 | ||
| KOG0303|consensus | 472 | 99.65 | ||
| KOG1034|consensus | 385 | 99.64 | ||
| KOG1273|consensus | 405 | 99.64 | ||
| KOG0322|consensus | 323 | 99.63 | ||
| KOG0290|consensus | 364 | 99.63 | ||
| KOG0649|consensus | 325 | 99.61 | ||
| KOG0290|consensus | 364 | 99.61 | ||
| KOG1007|consensus | 370 | 99.61 | ||
| KOG0644|consensus | 1113 | 99.6 | ||
| KOG2110|consensus | 391 | 99.6 | ||
| KOG4227|consensus | 609 | 99.58 | ||
| KOG1517|consensus | 1387 | 99.58 | ||
| KOG1188|consensus | 376 | 99.57 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.57 | |
| KOG1524|consensus | 737 | 99.56 | ||
| KOG1538|consensus | 1081 | 99.54 | ||
| KOG0642|consensus | 577 | 99.53 | ||
| KOG1009|consensus | 434 | 99.53 | ||
| KOG1587|consensus | 555 | 99.53 | ||
| KOG1240|consensus | 1431 | 99.52 | ||
| KOG1445|consensus | 1012 | 99.52 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.52 | |
| KOG1310|consensus | 758 | 99.52 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.52 | |
| KOG0644|consensus | 1113 | 99.51 | ||
| KOG0649|consensus | 325 | 99.51 | ||
| KOG1007|consensus | 370 | 99.51 | ||
| KOG1523|consensus | 361 | 99.5 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.49 | |
| KOG2110|consensus | 391 | 99.48 | ||
| KOG1524|consensus | 737 | 99.48 | ||
| KOG2139|consensus | 445 | 99.48 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.48 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.47 | |
| KOG1963|consensus | 792 | 99.47 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.46 | |
| KOG0771|consensus | 398 | 99.45 | ||
| KOG2111|consensus | 346 | 99.45 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.44 | |
| KOG1240|consensus | 1431 | 99.44 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.44 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.44 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.43 | |
| KOG1517|consensus | 1387 | 99.42 | ||
| KOG1523|consensus | 361 | 99.42 | ||
| KOG1334|consensus | 559 | 99.41 | ||
| KOG1963|consensus | 792 | 99.41 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.39 | |
| KOG2139|consensus | 445 | 99.37 | ||
| KOG0322|consensus | 323 | 99.37 | ||
| KOG2394|consensus | 636 | 99.36 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.36 | |
| KOG1310|consensus | 758 | 99.36 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.35 | |
| KOG3881|consensus | 412 | 99.33 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.33 | |
| KOG1334|consensus | 559 | 99.33 | ||
| KOG1272|consensus | 545 | 99.3 | ||
| KOG2315|consensus | 566 | 99.3 | ||
| KOG2111|consensus | 346 | 99.3 | ||
| KOG0771|consensus | 398 | 99.29 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.29 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.29 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.28 | |
| KOG4497|consensus | 447 | 99.27 | ||
| KOG1272|consensus | 545 | 99.26 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.25 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.23 | |
| KOG1354|consensus | 433 | 99.23 | ||
| KOG3881|consensus | 412 | 99.22 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.22 | |
| KOG2321|consensus | 703 | 99.19 | ||
| KOG2394|consensus | 636 | 99.19 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.19 | |
| KOG0280|consensus | 339 | 99.18 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.16 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.13 | |
| KOG4497|consensus | 447 | 99.13 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.12 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.12 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.12 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.1 | |
| KOG4547|consensus | 541 | 99.1 | ||
| KOG1409|consensus | 404 | 99.09 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.09 | |
| KOG4547|consensus | 541 | 99.08 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.08 | |
| KOG2321|consensus | 703 | 99.06 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.06 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.04 | |
| KOG0309|consensus | 1081 | 99.03 | ||
| KOG2041|consensus | 1189 | 98.98 | ||
| KOG4227|consensus | 609 | 98.97 | ||
| KOG1064|consensus | 2439 | 98.97 | ||
| KOG0974|consensus | 967 | 98.93 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.93 | |
| KOG0974|consensus | 967 | 98.93 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.91 | |
| KOG2041|consensus | 1189 | 98.9 | ||
| KOG2314|consensus | 698 | 98.85 | ||
| KOG1354|consensus | 433 | 98.84 | ||
| KOG0280|consensus | 339 | 98.82 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.8 | |
| KOG1912|consensus | 1062 | 98.8 | ||
| KOG2315|consensus | 566 | 98.79 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.79 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.78 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.76 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.75 | |
| KOG1064|consensus | 2439 | 98.74 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.73 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.72 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.71 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.7 | |
| KOG4190|consensus | 1034 | 98.65 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.64 | |
| KOG4190|consensus | 1034 | 98.61 | ||
| KOG4532|consensus | 344 | 98.61 | ||
| KOG1409|consensus | 404 | 98.55 | ||
| KOG4532|consensus | 344 | 98.53 | ||
| KOG2314|consensus | 698 | 98.53 | ||
| KOG1832|consensus | 1516 | 98.53 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.53 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.52 | |
| KOG3914|consensus | 390 | 98.51 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.46 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.45 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.44 | |
| KOG1912|consensus | 1062 | 98.43 | ||
| KOG0882|consensus | 558 | 98.38 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.38 | |
| KOG3914|consensus | 390 | 98.36 | ||
| KOG1920|consensus | 1265 | 98.32 | ||
| KOG1275|consensus | 1118 | 98.31 | ||
| KOG1645|consensus | 463 | 98.26 | ||
| KOG4714|consensus | 319 | 98.26 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.24 | |
| KOG1275|consensus | 1118 | 98.24 | ||
| KOG2695|consensus | 425 | 98.19 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.18 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.17 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.15 | |
| KOG2695|consensus | 425 | 98.13 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.1 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.1 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.09 | |
| KOG2114|consensus | 933 | 98.07 | ||
| KOG0309|consensus | 1081 | 98.05 | ||
| KOG4714|consensus | 319 | 98.05 | ||
| KOG1832|consensus | 1516 | 98.04 | ||
| KOG0882|consensus | 558 | 98.03 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.02 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.93 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.92 | |
| KOG2066|consensus | 846 | 97.91 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.91 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.9 | |
| KOG2114|consensus | 933 | 97.88 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.86 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.86 | |
| KOG1920|consensus | 1265 | 97.82 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 97.82 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.81 | |
| KOG4649|consensus | 354 | 97.81 | ||
| KOG3621|consensus | 726 | 97.8 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.8 | |
| KOG2066|consensus | 846 | 97.79 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.78 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.74 | |
| KOG1008|consensus | 783 | 97.72 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.71 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.71 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.66 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.65 | |
| KOG3617|consensus | 1416 | 97.64 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.63 | |
| KOG4649|consensus | 354 | 97.61 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.53 | |
| KOG1008|consensus | 783 | 97.5 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.48 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.41 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.39 | |
| KOG1645|consensus | 463 | 97.37 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.37 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.36 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.28 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.16 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.07 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.02 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.92 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.86 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.84 | |
| KOG4441|consensus | 571 | 96.79 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.78 | |
| KOG4441|consensus | 571 | 96.73 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 96.66 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 96.64 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.58 | |
| KOG3621|consensus | 726 | 96.54 | ||
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 96.52 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.49 | |
| PRK10115 | 686 | protease 2; Provisional | 96.46 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.38 | |
| KOG3617|consensus | 1416 | 96.34 | ||
| KOG4499|consensus | 310 | 96.22 | ||
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.16 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.16 | |
| KOG4640|consensus | 665 | 96.15 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.11 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.06 | |
| KOG4640|consensus | 665 | 96.02 | ||
| KOG2395|consensus | 644 | 96.02 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.91 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 95.87 | |
| KOG2079|consensus | 1206 | 95.83 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 95.79 | |
| KOG1897|consensus | 1096 | 95.7 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 95.63 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.58 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 95.49 | |
| KOG1897|consensus | 1096 | 95.46 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 95.42 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 95.36 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 95.36 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 95.24 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.23 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.12 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.03 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 95.0 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 94.93 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 94.88 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 94.84 | |
| KOG2079|consensus | 1206 | 94.59 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 94.58 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 94.56 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 94.48 | |
| KOG2444|consensus | 238 | 94.14 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.83 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 93.8 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 93.77 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 93.73 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 93.24 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.18 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 93.11 | |
| KOG2395|consensus | 644 | 93.09 | ||
| PRK10115 | 686 | protease 2; Provisional | 93.03 | |
| KOG3630|consensus | 1405 | 92.37 | ||
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 92.36 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 92.35 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 91.85 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 91.83 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 91.83 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 91.73 | |
| KOG4499|consensus | 310 | 91.5 | ||
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 91.49 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 91.47 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 91.41 | |
| KOG2444|consensus | 238 | 91.16 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 90.65 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 90.57 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 90.24 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 89.37 | |
| KOG1983|consensus | 993 | 89.07 | ||
| KOG3630|consensus | 1405 | 88.9 | ||
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 88.71 | |
| COG3292 | 671 | Predicted periplasmic ligand-binding sensor domain | 88.58 | |
| KOG1898|consensus | 1205 | 88.31 | ||
| KOG2247|consensus | 615 | 88.14 | ||
| KOG2247|consensus | 615 | 87.98 | ||
| PLN02153 | 341 | epithiospecifier protein | 86.81 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 86.27 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 86.03 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 85.71 | |
| PLN02193 | 470 | nitrile-specifier protein | 85.3 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 84.33 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 84.26 | |
| KOG1916|consensus | 1283 | 84.23 | ||
| PLN02153 | 341 | epithiospecifier protein | 84.05 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 83.94 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 83.68 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 83.62 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 83.25 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 82.8 | |
| KOG4460|consensus | 741 | 80.95 | ||
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 80.35 |
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-57 Score=508.77 Aligned_cols=438 Identities=52% Similarity=0.885 Sum_probs=377.5
Q ss_pred CCCCCCceeCCCCC-ccchhhhccccCCCCCCCCCCCcccccCccccccHHHHHHHHhcccCCCcCCCCCCCCCcccccC
Q psy10114 371 LEVKADRYIPSRCG-EKWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIEGVKGQCDEKRVIFS 449 (819)
Q Consensus 371 ~~~~~dRfiP~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~~~~~~~~~~~~~~~~~~~~ 449 (819)
...++|||||+|.+ .+++..++.+.. ...+.+ +...+.....+..+..++++|++++. . ...+.....-+..
T Consensus 42 ~~~~~~rf~P~r~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~l~~~e~~~~~-~-~~~~~~~~~~~~~ 114 (484)
T KOG0305|consen 42 SSKVGDRFIPSRLSSEEFNRNFKYIGS----FSRPNK-RSALDTGRESSSLAASLLRSELFKSN-K-ITSEQSLRALPDE 114 (484)
T ss_pred ccccCCccCCcccchhhcccccccccc----cccccc-ccccccccccchhhhhhhhhhhhccC-c-cchhhhhhhccCC
Confidence 35789999999998 588888776643 111111 11101111234566689999999987 2 2222222222455
Q ss_pred CCccccccccCCCCCCCCcCCCCceeeCCCCccchhhhcCCcccceeccCCCceeecCCCcCCcceEEEEEecCCeEEEE
Q psy10114 450 PDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSV 529 (819)
Q Consensus 450 p~~~~Lf~y~~~~~~~~~~~~~~~~~lsP~s~~s~~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~~LLa~ 529 (819)
|.++++|.|....+.+ ......++...|.......+..++++..|+++..|+++||||++++|||.+.++|+..+++++
T Consensus 115 ~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~r~~~r~~~~~p~rvLDaP~l~dDfY~nlldWss~n~laV 193 (484)
T KOG0305|consen 115 PNRDRILTYKSKAPRP-RSRTQEPDSVYPSAESSIRLLSSPRKLKRKIPQTPYRVLDAPGLQDDFYLNLLDWSSANVLAV 193 (484)
T ss_pred ccccceeEecccCCCC-ccccccccccccccccccccccccccccCcccCChhhhccCCcccccHhhhHhhcccCCeEEE
Confidence 5568999999877653 234455556667777777788888999999999999999999999999999999999999999
Q ss_pred ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec-CCCCeEEEEeCCc
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG-HTARVGALAWNGD 608 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g-Hs~~V~sLawng~ 608 (819)
+.+..|++|+..++++..++++. ++.|+++.|+++|.+||+|..+|.|.|||.++.+.++.+.+ |.++|.+++|++.
T Consensus 194 alg~~vylW~~~s~~v~~l~~~~--~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~ 271 (484)
T KOG0305|consen 194 ALGQSVYLWSASSGSVTELCSFG--EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSS 271 (484)
T ss_pred EecceEEEEecCCCceEEeEecC--CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCc
Confidence 99999999999999999988876 78999999999999999999999999999999999999998 9999999999999
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEE
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIA 688 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLa 688 (819)
.+.+|+.||.|.++|++..+.... .+.+|.++||+++|++|++++|+|++|+.+.|||....+++..+.+|.++|++++
T Consensus 272 ~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~a 350 (484)
T KOG0305|consen 272 VLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALA 350 (484)
T ss_pred eEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEee
Confidence 999999999999999999875433 6899999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC
Q psy10114 689 WSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768 (819)
Q Consensus 689 fSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH 768 (819)
|+|....++|+|||+.|++|++||..+|+.+..++++++|+++.|++..+++++++|+.++.|.||++++.+++..+.+|
T Consensus 351 wcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH 430 (484)
T KOG0305|consen 351 WCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGH 430 (484)
T ss_pred eCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc---ccccccchhccCC
Q psy10114 769 SYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR---ESKSVLNLFSSIR 819 (819)
Q Consensus 769 ~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k---~~~s~l~~fs~IR 819 (819)
..+|.++++||||..+++|+.|++++||++++....+. +..+.+..+..+|
T Consensus 431 ~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~~~~~~~~~~~s~~~~~~~iR 484 (484)
T KOG0305|consen 431 TSRVLYLALSPDGETIVTGAADETLRFWNLFDERPKSTKKKENTSVLSLTSGIR 484 (484)
T ss_pred cceeEEEEECCCCCEEEEecccCcEEeccccCCCCccccccccccccccccccC
Confidence 99999999999999999999999999999998544333 3455666666665
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-49 Score=436.06 Aligned_cols=490 Identities=15% Similarity=0.187 Sum_probs=365.9
Q ss_pred ccccceeecCCcccccchhhhHHHhhhccccCCCcccccccccCCccccCChhhhHHHHhhhcCCCCCCCCCCCC-----
Q psy10114 284 KRHHAATEENSNTDLDSRKLSKVQRNLMTHDFSSHRNKHLDQNMNMDLENENNEMEMENLATEDENTAPPLDLYD----- 358 (819)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 358 (819)
..-|||||++|||||||+|+++||++|++||.|.+||+++|++||++++||+||+++|++||+++.+++++|||+
T Consensus 133 d~~hIgYD~~gkkI~kp~k~~~ld~fl~~iedp~~Wr~v~Dk~tG~dv~LTkEev~lI~ri~~g~~pd~d~dpYeP~~d~ 212 (733)
T KOG0650|consen 133 DEKHIGYDIDGKKITKPAKGDELDSFLAKIEDPDYWRKVKDKMTGKDVNLTKEEVKLIRRIARGEIPDPDFDPYEPLVDW 212 (733)
T ss_pred ccccccccccccEecCCCccchHHHHHHhhcCcchhccccccCCCceeeecHHHHHHHHHHHcccCCCCCCCccchHHHH
Confidence 457999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCceeCCCCCc-cchhhhccccCCCCCCCCCCCcccccCccccccHHHHHHHHhcccCCCcC--
Q psy10114 359 IMSPAYRSTSANLEVKADRYIPSRCGE-KWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGANIE-- 435 (819)
Q Consensus 359 ~~~~~~~~~~~~~~~~~dRfiP~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~~~~~~-- 435 (819)
|++..+.+|.+++|++++||||||.|+ ...+..++|+++++.+.+..|+ +....| +||+++..
T Consensus 213 Fs~~~~~~Pi~~~PepKrrFiPSk~Eakrv~rmv~Air~Gwik~~~r~ke--------e~~~~y------dLW~~dd~~e 278 (733)
T KOG0650|consen 213 FSRDVEIHPISNRPEPKRRFIPSKTEAKRVSRMVHAIRKGWIKTDPREKE--------ENYKFY------DLWADDDTGE 278 (733)
T ss_pred hcccccccccccCCCcccccCCcHHHHHHHHHHHHHHHhccccCCccccc--------cCcccc------ceeccCCchh
Confidence 899999999999999999999999988 8889999999999876421111 122356 88885532
Q ss_pred CCCCCCCCcccccCCCccccccccCCCCCCCCcCCCCceeeCCCCccchhhhcCCcccceeccCCCceeecCCCcCCcce
Q psy10114 436 GVKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFY 515 (819)
Q Consensus 436 ~~~~~~~~~~~~~~p~~~~Lf~y~~~~~~~~~~~~~~~~~lsP~s~~s~~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfy 515 (819)
+........++|+.+..+.--+|++|.++-...+....|...-.......++....++.|++|...-.+.+..+.+-|.|
T Consensus 279 ~l~r~~~~~paPKl~lP~heESYNPP~EYL~~~eE~~~we~~E~~~R~l~F~P~ky~sLR~VPaY~r~irErFeRcLDLY 358 (733)
T KOG0650|consen 279 QLDRHLDLVPAPKLALPGHEESYNPPEEYLFDEEEKKAWEEAEPEDRKLNFIPQKYKSLRKVPAYERSIRERFERCLDLY 358 (733)
T ss_pred hhhcccccCCccccCCCCcccccCCchhhccCHHHhhhhhhccccccccccccccchhhhcchhHHHHHHHHHHHhHHhh
Confidence 22112233456777778888889998877655444444544333333444555556666777655433333333333333
Q ss_pred EEEEEecCCeEEEEECCCeE-EEE---EcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 516 LNLVDWSSQNVLSVGLGSCV-YLW---SACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V-~LW---d~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
+.--. ...-+-..-...| .+= |+.---......+.+|.+.|.+++..|.|.+||+|+.||+|+||.+.+|++++
T Consensus 359 L~PR~--rK~rlniDpe~LiPkLPsp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr 436 (733)
T KOG0650|consen 359 LAPRV--RKMRLNIDPESLIPKLPSPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVR 436 (733)
T ss_pred hCccc--ccceecCCHHHhcccCCChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEE
Confidence 22100 0000000000000 000 00101111223467899999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEeCCc----eeeeccCCCeEEEEECCCC---------------------------------Cc--cce
Q psy10114 592 KLVGHTARVGALAWNGD----MLSSGSRDRMILQRDVRTP---------------------------------NS--QSE 632 (819)
Q Consensus 592 tl~gHs~~V~sLawng~----~LaSGS~DGtI~IWDi~t~---------------------------------~~--~~v 632 (819)
++.- .+.|.|++|++. .|+++-.+. +.+-+..-+ +. ..+
T Consensus 437 ~~~~-d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v 514 (733)
T KOG0650|consen 437 TVQF-DSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGV 514 (733)
T ss_pred EEee-cceeEEEEecCCCCceeEEEEecCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccce
Confidence 8874 458999999532 344333322 333322111 00 112
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCC---eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDN---RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DG---tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
.....|...|..+.|+..|.+|++...++ .|.|.++...+...-|....+.|.++.|+|...+++++ ....|+
T Consensus 515 ~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVa----Tq~~vR 590 (733)
T KOG0650|consen 515 CIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVA----TQRSVR 590 (733)
T ss_pred EEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEE----eccceE
Confidence 34455788999999999999999987654 69999998877777777778899999999999998887 468999
Q ss_pred EEECCCCceeEEEcCCC-CeEEEEEccCCCEEEEEEecCCCeEEEEECC-CCcEEEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 710 FWNTLTGQPMQCVDTGS-QVCNLAWSKHSSELVSTHGYSQNQILVWKYP-TLTQVAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 710 IWDl~tg~~v~~l~~~s-~V~sLafSpdg~~LastsGssDg~I~IWDl~-s~k~l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
+||+..++.++.+.++. .|.+++.+|.|..+++ |+.|+.+..+|+. +.++.+++.-|...+++++|++.-.++++|
T Consensus 591 iYdL~kqelvKkL~tg~kwiS~msihp~GDnli~--gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~ 668 (733)
T KOG0650|consen 591 IYDLSKQELVKKLLTGSKWISSMSIHPNGDNLIL--GSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASG 668 (733)
T ss_pred EEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEE--ecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeee
Confidence 99999988888776655 5899999999999999 8899999999997 456778889999999999999999999999
Q ss_pred eCCCcEEEEE
Q psy10114 788 AGDETLRFWN 797 (819)
Q Consensus 788 S~DGtIrIWd 797 (819)
+.||++.|+.
T Consensus 669 sdDgtv~Vfh 678 (733)
T KOG0650|consen 669 SDDGTVIVFH 678 (733)
T ss_pred cCCCcEEEEe
Confidence 9999999874
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=321.72 Aligned_cols=317 Identities=27% Similarity=0.454 Sum_probs=274.0
Q ss_pred ceeeCCCCccchhhhcCCcccceeccCCCceeecCCCcCCcceEEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEe
Q psy10114 473 PYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCD 550 (819)
Q Consensus 473 ~~~lsP~s~~s~~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~ 550 (819)
+.....+++.+..+.....+.+.+++..--..--..--.++-++.+++|+++ .+++|+.||+|++||..+|+..- ..
T Consensus 117 ~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g-~~ 195 (480)
T KOG0271|consen 117 AVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG-RA 195 (480)
T ss_pred cEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc-cc
Confidence 3333445557778888888888888754322211122345678999999964 79999999999999999987643 46
Q ss_pred ccCCCCCeEEEEEcC-----CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC-CceeeeccCCCeEEEEEC
Q psy10114 551 LSADGNSVTSVAWNE-----RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN-GDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 551 l~~h~~~VtsLafSp-----dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi 624 (819)
+.+|...|++++|.| ..++||+++.||.|+|||+..++++..+.+|+.+|+|+.|. .+++++||.|++|++|+.
T Consensus 196 l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a 275 (480)
T KOG0271|consen 196 LRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRA 275 (480)
T ss_pred ccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEc
Confidence 889999999999976 56899999999999999999999999999999999999996 569999999999999999
Q ss_pred CCCCccceEEEecccCCeEEEEEC-----------CCCC-------------------------EEEEEECCCeEEEEEC
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWS-----------PDNQ-------------------------YLASGGNDNRLYVWNL 668 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafS-----------pdg~-------------------------~LaSGS~DGtI~IWDl 668 (819)
..+. ....+.+|...|+.++.+ |.++ .+++|++|+++.+|+.
T Consensus 276 ~dG~--~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p 353 (480)
T KOG0271|consen 276 LDGK--LCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNP 353 (480)
T ss_pred cchh--HHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecc
Confidence 8855 568899999999999887 2233 4999999999999997
Q ss_pred CC-CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEec
Q psy10114 669 HS-MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 669 ~t-~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGs 746 (819)
.. .+++.++.+|+.-|+.+.||||++++ ++++ .|+.|++||.++|+.+.++. |-..|..++|+.|.+.+++ |+
T Consensus 354 ~~~kkpi~rmtgHq~lVn~V~fSPd~r~I-ASaS--FDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS--~S 428 (480)
T KOG0271|consen 354 FKSKKPITRMTGHQALVNHVSFSPDGRYI-ASAS--FDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVS--GS 428 (480)
T ss_pred cccccchhhhhchhhheeeEEECCCccEE-EEee--cccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEE--cC
Confidence 54 45889999999999999999999855 4444 89999999999999999986 7788999999999999999 89
Q ss_pred CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 747 SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
.|.++++||+++.+....+.||.+.|.++.|+|||+.+++|+.|..+++|.
T Consensus 429 kDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 429 KDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred CCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 999999999999999999999999999999999999999999999999995
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=321.53 Aligned_cols=285 Identities=26% Similarity=0.415 Sum_probs=249.7
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE-EE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ-VH 591 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~-i~ 591 (819)
.+.++.|+ +..+++|+.|.++++||..+... ....++|...|.|++|+|||+.||+|+.||+|++||.++|++ .+
T Consensus 117 ~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp--~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~ 194 (480)
T KOG0271|consen 117 AVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETP--LFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGR 194 (480)
T ss_pred cEEEEEecCCCceEEecCCCceEEeeccCCCCc--ceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccc
Confidence 45555555 56899999999999999998765 446789999999999999999999999999999999998865 57
Q ss_pred EEecCCCCeEEEEeC-------CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 592 KLVGHTARVGALAWN-------GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 592 tl~gHs~~V~sLawn-------g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
.+.+|...|++++|. ..+|++++.||.|+|||+..+. .+..+.+|+..|+|+.|--+| ++++|+.|++|+
T Consensus 195 ~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~--~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIk 271 (480)
T KOG0271|consen 195 ALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT--CVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIK 271 (480)
T ss_pred cccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce--EEEEeccCccceEEEEEcCCc-eEEecCCCceEE
Confidence 789999999999992 4589999999999999998866 568899999999999997554 899999999999
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEc-----------CCCCe------------------------EEEEEccCCCCeEE
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWS-----------PHHHG------------------------LLASGGGTADRCIR 709 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafS-----------Pdg~~------------------------LLaSGgGs~DgtIr 709 (819)
+|+...|...+.+++|...|+.++.+ |.+.. .+++|+ .|.++.
T Consensus 272 vw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgs--Dd~tlf 349 (480)
T KOG0271|consen 272 VWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGS--DDFTLF 349 (480)
T ss_pred EEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEec--CCceEE
Confidence 99999999999999999999999887 22322 366665 899999
Q ss_pred EEECCCCc-eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 710 FWNTLTGQ-PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 710 IWDl~tg~-~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
+|+....+ ++... .|..-|..+.||||++++++ ++-|..|++||.++|+.+.+++||-+.|..++||.|.++|++|
T Consensus 350 lW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IAS--aSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~ 427 (480)
T KOG0271|consen 350 LWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIAS--ASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSG 427 (480)
T ss_pred EecccccccchhhhhchhhheeeEEECCCccEEEE--eecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEc
Confidence 99976543 44433 56777999999999999999 7789999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEECCCCceecccc
Q psy10114 788 AGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 788 S~DGtIrIWdl~s~~~~~k~~ 808 (819)
+.|.++++|++.+++..+..+
T Consensus 428 SkDsTLKvw~V~tkKl~~DLp 448 (480)
T KOG0271|consen 428 SKDSTLKVWDVRTKKLKQDLP 448 (480)
T ss_pred CCCceEEEEEeeeeeecccCC
Confidence 999999999999988766554
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=326.63 Aligned_cols=281 Identities=25% Similarity=0.418 Sum_probs=253.2
Q ss_pred CCcCCcceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC--CCEEEEEecCceEEEee
Q psy10114 508 PELQDDFYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER--GNLVAVGTHHGYVQVWD 583 (819)
Q Consensus 508 p~l~dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd--G~~LAsGs~DGtI~IWD 583 (819)
..+.++-.+..+.++ ++.+++++.+|.+++|+..+.+ .++.+.+|.+.|.++.|+|. +..+|+|+.||++++|+
T Consensus 170 SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~--~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~ 247 (459)
T KOG0272|consen 170 SQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN--LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWK 247 (459)
T ss_pred hhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc--eeEEEeccccceeeEEEccCCCccceeeeccCCceeeec
Confidence 334444445444554 6789999999999999998884 45688999999999999996 57999999999999999
Q ss_pred cCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC
Q psy10114 584 VSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN 661 (819)
Q Consensus 584 l~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG 661 (819)
+++...+..+.+|..+|..++| +|++|++++.|.+-++||++++. ......||...|.+++|.+||..+++||.|.
T Consensus 248 ~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~--ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~ 325 (459)
T KOG0272|consen 248 LSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS--ELLLQEGHSKGVFSIAFQPDGSLAATGGLDS 325 (459)
T ss_pred cCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch--hhHhhcccccccceeEecCCCceeeccCccc
Confidence 9999999999999999999999 68899999999999999999976 3466789999999999999999999999999
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEcc-CCCE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSK-HSSE 739 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSp-dg~~ 739 (819)
.-+|||+++++++..+.+|..+|.+++|+|+|.. +++|+ .|++++|||++..+.+..+ .|.+-|+.+.|+| .|.+
T Consensus 326 ~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~-lATgs--~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~f 402 (459)
T KOG0272|consen 326 LGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYH-LATGS--SDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYF 402 (459)
T ss_pred hhheeecccCcEEEEecccccceeeEeECCCceE-EeecC--CCCcEEEeeecccccceecccccchhhheEecccCCeE
Confidence 9999999999999999999999999999999974 55554 8999999999998888777 4677799999999 5666
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 740 LVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
|++ ++.|+++++|..+++.+++++.||++.|.++++++|++.++|++.|.++++|.
T Consensus 403 L~T--asyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 403 LVT--ASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEE--cccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 666 67899999999999999999999999999999999999999999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=293.87 Aligned_cols=273 Identities=27% Similarity=0.481 Sum_probs=249.7
Q ss_pred EEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc------
Q psy10114 516 LNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA------ 587 (819)
Q Consensus 516 v~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg------ 587 (819)
+.+++|+. .++++++.||.+.|||.-+...+....+ ....|..++|+|.|+.+|.|+-|....||++.+.
T Consensus 58 i~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl--~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~ 135 (343)
T KOG0286|consen 58 IYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPL--PSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNV 135 (343)
T ss_pred eeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEec--CceeEEEEEECCCCCeEEecCcCceeEEEecccccccccc
Confidence 66788885 5799999999999999988776655444 4689999999999999999999999999999854
Q ss_pred eEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEE
Q psy10114 588 KQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYV 665 (819)
Q Consensus 588 k~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~I 665 (819)
+..+.+.+|++-+.|..| +...|++||.|.+..+||+++++ ....+.+|.+.|.+++++| +++.+++|+-|+..++
T Consensus 136 ~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~--~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~akl 213 (343)
T KOG0286|consen 136 RVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQ--QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKL 213 (343)
T ss_pred eeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccce--EEEEecCCcccEEEEecCCCCCCeEEecccccceee
Confidence 456778899999999999 77899999999999999999976 4688999999999999999 9999999999999999
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEE
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVS 742 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~Las 742 (819)
||++.+.++++|.+|...|++++|.|+|..+ ++| +.|++.|+||++..+.+..+.+. .+|++++||..|+.|++
T Consensus 214 WD~R~~~c~qtF~ghesDINsv~ffP~G~af-atG--SDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfa 290 (343)
T KOG0286|consen 214 WDVRSGQCVQTFEGHESDINSVRFFPSGDAF-ATG--SDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFA 290 (343)
T ss_pred eeccCcceeEeecccccccceEEEccCCCee-eec--CCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEe
Confidence 9999999999999999999999999999854 454 49999999999999998888654 56899999999999999
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
|+.|..+.+||.-.++.+..+.||..+|.++..+|||.-++||+.|.++|||.
T Consensus 291 --gy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 291 --GYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred --eecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 89999999999999999999999999999999999999999999999999994
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=277.70 Aligned_cols=270 Identities=25% Similarity=0.419 Sum_probs=235.2
Q ss_pred CCeEEEEECCCeEEEEEcCCCceE---EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCC
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVT---RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR 599 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~---~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~ 599 (819)
.+.+++++.|..+.+|++...+.. .+..+.+|+..|..+..++||++.++++.||++++||+.+++..+.+.+|...
T Consensus 28 ~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~d 107 (315)
T KOG0279|consen 28 SDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKD 107 (315)
T ss_pred CceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCc
Confidence 567899999999999998654322 24467899999999999999999999999999999999999999999999999
Q ss_pred eEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCCceeE
Q psy10114 600 VGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 600 V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
|.+++|+ ...+++|+.|++|++|++.... .....-.++++.|.|+.|+|+ ..++++++.|++|++||+++.+...
T Consensus 108 Vlsva~s~dn~qivSGSrDkTiklwnt~g~c-k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~ 186 (315)
T KOG0279|consen 108 VLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC-KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRT 186 (315)
T ss_pred eEEEEecCCCceeecCCCcceeeeeeecccE-EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhh
Confidence 9999994 5699999999999999997743 222222233788999999997 6799999999999999999999999
Q ss_pred EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEE
Q psy10114 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 676 t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWD 755 (819)
.+.+|.+.++.+++||||. +.++|| .||.+.+||++.++.+..+++...|.+++|+|+.-.|+.+. +..|+|||
T Consensus 187 ~~~gh~~~v~t~~vSpDGs-lcasGg--kdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at---~~sIkIwd 260 (315)
T KOG0279|consen 187 TFIGHSGYVNTVTVSPDGS-LCASGG--KDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAAT---ATSIKIWD 260 (315)
T ss_pred ccccccccEEEEEECCCCC-EEecCC--CCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeecc---CCceEEEe
Confidence 9999999999999999998 666766 99999999999999999999999999999999988887743 45699999
Q ss_pred CCCCcEEEEEec----C-----CCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 756 YPTLTQVAKLTG----H-----SYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 756 l~s~k~l~sl~g----H-----~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+.++..+.+++. . .....+++|++||+.|..|-.|+.|++|.+.
T Consensus 261 l~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 261 LESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 999888776642 1 2345788999999999999999999999875
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=298.41 Aligned_cols=247 Identities=26% Similarity=0.440 Sum_probs=230.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCC
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~ 628 (819)
+...+|..+.|+.|++.||+|+.+|.+++|+..+...+.++.||.+.|.++.|. +..+++|+.||++++|++.+..
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET 252 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence 457899999999999999999999999999999999999999999999999993 4489999999999999998864
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeE
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCI 708 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtI 708 (819)
.+..+.+|...|..++|+|+|++|++++.|.+-++||+++++.+....+|...|.+++|.+||. ++++|| .|..-
T Consensus 253 --~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGS-L~~tGG--lD~~~ 327 (459)
T KOG0272|consen 253 --PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGS-LAATGG--LDSLG 327 (459)
T ss_pred --chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCc-eeeccC--ccchh
Confidence 5688999999999999999999999999999999999999999988999999999999999998 777776 99999
Q ss_pred EEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec-CCCEEEE
Q psy10114 709 RFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP-DGEAIVT 786 (819)
Q Consensus 709 rIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp-DG~~LaS 786 (819)
+|||+++|+++..+. |..+|.+++|+|+|-.+++ |+.|++++|||++..+.+..+.+|..-|+.+.|+| .|.+|+|
T Consensus 328 RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lAT--gs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 328 RVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLAT--GSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVT 405 (459)
T ss_pred heeecccCcEEEEecccccceeeEeECCCceEEee--cCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEE
Confidence 999999999998884 6778999999999999999 89999999999999999999999999999999998 7899999
Q ss_pred EeCCCcEEEEECCCCceecc
Q psy10114 787 GAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~~~~k 806 (819)
++.|+++++|.-.+..+.+.
T Consensus 406 asyD~t~kiWs~~~~~~~ks 425 (459)
T KOG0272|consen 406 ASYDNTVKIWSTRTWSPLKS 425 (459)
T ss_pred cccCcceeeecCCCcccchh
Confidence 99999999999988776554
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-30 Score=263.50 Aligned_cols=274 Identities=31% Similarity=0.510 Sum_probs=243.0
Q ss_pred eEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+.+++|++ +.+++++.+|.|++|+..+++... .+..|...+.++.|+++++.+++++.||.|++||+.+++.+..
T Consensus 11 ~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~ 88 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLR--TLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRT 88 (289)
T ss_pred CEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEE--EEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEE
Confidence 467777775 678888889999999998876433 4567788899999999999999999999999999999888999
Q ss_pred EecCCCCeEEEEeCC--ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAWNG--DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLawng--~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
+..|...+.++.|++ ..+++++.||.+.+||+++.+ ....+..|...+.+++|+|+++++++++.||.|++||+++
T Consensus 89 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~ 166 (289)
T cd00200 89 LTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGK--CLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT 166 (289)
T ss_pred EeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcE--EEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc
Confidence 999999999999954 677888889999999998654 3466678899999999999999999888899999999999
Q ss_pred CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 671 ~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
++.+..+..|...+.+++|+|+++.+++++ .|+.+++||+++++.+..+ .+...+.+++|++++..+++ +..++
T Consensus 167 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~ 241 (289)
T cd00200 167 GKCVATLTGHTGEVNSVAFSPDGEKLLSSS---SDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLAS--GSEDG 241 (289)
T ss_pred cccceeEecCccccceEEECCCcCEEEEec---CCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEE--EcCCC
Confidence 999999999999999999999998776654 5999999999999888888 66778999999999777776 66799
Q ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
.|++||..+++....+.+|...|.+++|+++++.+++++.||.+++|+
T Consensus 242 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 242 TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 999999999999999999999999999999999999999999999996
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=284.50 Aligned_cols=278 Identities=22% Similarity=0.421 Sum_probs=253.5
Q ss_pred CcceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE
Q psy10114 512 DDFYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 512 dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
+.-.+.+++|+ |+.+++|..||.+++|+...+.. ..+..|.++|.++.|+.+|++|++|+.||++.+||..++..
T Consensus 234 ~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~---~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~ 310 (524)
T KOG0273|consen 234 SNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLI---STLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV 310 (524)
T ss_pred ccCCcceEEecCCCCeEEEeecCcEEEEEecCchhh---hhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceE
Confidence 33468999999 77899999999999999876543 36788999999999999999999999999999999999999
Q ss_pred EEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 590 VHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 590 i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
.+.+.-|+.+-.++.| +.+.+++++.||.|+++.+.... ++.++.+|.++|.++.|+|.|.+|++++.|++++||..
T Consensus 311 ~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~--P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~ 388 (524)
T KOG0273|consen 311 KQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDR--PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSM 388 (524)
T ss_pred EEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCC--cceeeecccCceEEEEECCCCceEEEecCCCeeEeeec
Confidence 9999999999889999 78899999999999999997755 56889999999999999999999999999999999999
Q ss_pred CCCceeEEEecCCCCEEEEEEcCCCC--------eEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCE
Q psy10114 669 HSMSPLQTYTEHLAAVKAIAWSPHHH--------GLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSE 739 (819)
Q Consensus 669 ~t~~~i~t~~~h~~~VtsLafSPdg~--------~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~ 739 (819)
........+.+|...|..+.|+|.|. ..+++++ .|++|++||+..|.++..+ +|..+|.+++|+|+|++
T Consensus 389 ~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas--~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~y 466 (524)
T KOG0273|consen 389 GQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS--FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRY 466 (524)
T ss_pred CCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee--cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcE
Confidence 99999999999999999999999764 2445544 8999999999999999999 89999999999999999
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 740 LVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+++ |+.||.|.+|+.++++.+++..+. +.|..++|+.+|..|..+..||.+++-|+.
T Consensus 467 lAs--Gs~dg~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 467 LAS--GSLDGCVHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred EEe--cCCCCeeEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 999 999999999999999999998854 459999999999999999999999998874
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-30 Score=262.27 Aligned_cols=273 Identities=22% Similarity=0.341 Sum_probs=237.2
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVG 601 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~ 601 (819)
-.++++|.|.+|++|.+.+|...+ +++...+.|+.+...|+++.||+|+.. .|++||+.+++ ++.++.+|...|.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~r--Tiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVt 87 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSR--TIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVT 87 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEE--EEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceE
Confidence 468899999999999999998876 455557899999999999999999875 69999998775 6899999999999
Q ss_pred EEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe-
Q psy10114 602 ALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT- 678 (819)
Q Consensus 602 sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~- 678 (819)
++.| +|..+++||+||+++|||++.... .+...|...|+++..+|+...|++|.++|.|++||+.+..+...+.
T Consensus 88 aVgF~~dgrWMyTgseDgt~kIWdlR~~~~---qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liP 164 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSEDGTVKIWDLRSLSC---QRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIP 164 (311)
T ss_pred EEEEeecCeEEEecCCCceEEEEeccCccc---chhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCC
Confidence 9999 799999999999999999999553 4555678999999999999999999999999999999886655543
Q ss_pred cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE------EE-cCCCCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ------CV-DTGSQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 679 ~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~------~l-~~~s~V~sLafSpdg~~LastsGssDg~I 751 (819)
+....|.++...|+|..+++.. ..|+..+|++.+++... ++ .+.+.+..+.+|||+++|++ .++|.++
T Consensus 165 e~~~~i~sl~v~~dgsml~a~n---nkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat--~ssdktv 239 (311)
T KOG0315|consen 165 EDDTSIQSLTVMPDGSMLAAAN---NKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLAT--CSSDKTV 239 (311)
T ss_pred CCCcceeeEEEcCCCcEEEEec---CCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEe--ecCCceE
Confidence 4567899999999999777653 68999999998764332 33 35677999999999999999 7789999
Q ss_pred EEEECCCC-cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 752 LVWKYPTL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 752 ~IWDl~s~-k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+||+.+++ +.-..+++|...+...+||.||+||+||+.|+.+++|++..++...+.
T Consensus 240 ~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 240 KIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred EEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeec
Confidence 99999988 666778899999999999999999999999999999999998865443
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=284.92 Aligned_cols=278 Identities=25% Similarity=0.471 Sum_probs=241.5
Q ss_pred cceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 513 DFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 513 Dfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
...++.+.|.+ ..+++|+..|.+.+|+..+-..+. -++.|.+.|+++.|+++|.++++|+.+|.|++|+..-.. +
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEt--ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-V 172 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFET--ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-V 172 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHH--HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-h
Confidence 34577788885 579999999999999985543332 356899999999999999999999999999999976443 4
Q ss_pred EEEec-CCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 591 HKLVG-HTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 591 ~tl~g-Hs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
+.+++ |...|.+++|+ ...++++|+||+|+|||...... ...+.+|.-.|.+++|+|....+|+||.|+.|++||
T Consensus 173 k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~ke--e~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWD 250 (464)
T KOG0284|consen 173 KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKE--ERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWD 250 (464)
T ss_pred HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCch--hheeccCCCCcceeccCCccceeEEccCCceeEeec
Confidence 44554 45999999994 66999999999999999988664 367799999999999999999999999999999999
Q ss_pred CCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEec
Q psy10114 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 668 l~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGs 746 (819)
.++++++.++.+|+..|.++.|+|++++|+ +++ .|..++++|+++-+.+.++. |...+.++.|+|-...++++ |+
T Consensus 251 prSg~cl~tlh~HKntVl~~~f~~n~N~Ll-t~s--kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lfts-gg 326 (464)
T KOG0284|consen 251 PRSGSCLATLHGHKNTVLAVKFNPNGNWLL-TGS--KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTS-GG 326 (464)
T ss_pred CCCcchhhhhhhccceEEEEEEcCCCCeeE-Ecc--CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceee-cc
Confidence 999999999999999999999999997555 444 89999999999877777775 78889999999988877776 77
Q ss_pred CCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 747 SQNQILVWKYPTLTQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
.||.|..|.+...+++..+. +|...|++++|+|-|..|++|+.|.++++|.-.
T Consensus 327 ~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 327 SDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred CCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 99999999998666666654 799999999999999999999999999999754
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=274.04 Aligned_cols=275 Identities=24% Similarity=0.404 Sum_probs=249.6
Q ss_pred EEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-ceEEEE
Q psy10114 516 LNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-AKQVHK 592 (819)
Q Consensus 516 v~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-gk~i~t 592 (819)
+..+-+.+. .+++++.|++|++||..+++... .+.+|.+.|.+++|+..|+++|+++.|=.+++||.++ .++++.
T Consensus 111 vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~--~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks 188 (406)
T KOG0295|consen 111 VTRVIFHPSEALVVSASEDATIKVFDTETGELER--SLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKS 188 (406)
T ss_pred eeeeeeccCceEEEEecCCceEEEEEccchhhhh--hhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHH
Confidence 444444544 46667789999999999999844 7899999999999999999999999999999999987 578889
Q ss_pred EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
+.+|...|.++.| .|++++|+++|.+|+.||+.++. .+.++.+|++.|..+..+.||..+|++++|.+|++|-..+
T Consensus 189 ~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~--cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t 266 (406)
T KOG0295|consen 189 LIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGY--CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVAT 266 (406)
T ss_pred hcCcccceeeEEEEecCCeeeecccccceeEEecccce--eEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEecc
Confidence 9999999999999 78999999999999999999976 5689999999999999999999999999999999999999
Q ss_pred CceeEEEecCCCCEEEEEEcCCC--------------CeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEcc
Q psy10114 671 MSPLQTYTEHLAAVKAIAWSPHH--------------HGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSK 735 (819)
Q Consensus 671 ~~~i~t~~~h~~~VtsLafSPdg--------------~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSp 735 (819)
+++...+.+|+-+|.+++|.|.. ..++.+++ .|++|++||+.+|.++.++ .+++.|+.++|+|
T Consensus 267 ~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S--rDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p 344 (406)
T KOG0295|consen 267 KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGS--RDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP 344 (406)
T ss_pred chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeec--ccceEEEEeccCCeEEEEEecccceeeeeEEcC
Confidence 99999999999999999997742 23555554 9999999999999999888 5788999999999
Q ss_pred CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.|+++++ ..+|+++++||+.++++...+..|..-|++++|..+-.+++||+-|.++++|..
T Consensus 345 ~Gkyi~S--caDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 345 GGKYILS--CADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred CCeEEEE--EecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 9999999 668999999999999999999999999999999999999999999999999974
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=283.60 Aligned_cols=315 Identities=20% Similarity=0.343 Sum_probs=256.3
Q ss_pred chhhhcCCcccceeccCCCceeecCCCcCCcceEEEEEec--CCeEEEEECC-CeEEEEEcCCCceEEEEeccCCCCCeE
Q psy10114 483 SQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWS--SQNVLSVGLG-SCVYLWSACTSQVTRLCDLSADGNSVT 559 (819)
Q Consensus 483 s~~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS--~~~LLa~g~D-g~V~LWd~~tg~~~~l~~l~~h~~~Vt 559 (819)
...+........-.+..+|...+--..--.+..+..+.|+ |+.++.++.. |++-||+.++.... ...++|...++
T Consensus 277 t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYV--lKQQgH~~~i~ 354 (893)
T KOG0291|consen 277 TNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYV--LKQQGHSDRIT 354 (893)
T ss_pred ceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecccee--eecccccccee
Confidence 3334444444444444555433321111123456667777 7777777665 79999999887653 46678999999
Q ss_pred EEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEec
Q psy10114 560 SVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVG 637 (819)
Q Consensus 560 sLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g 637 (819)
+++++|||+++|+|+.||.|+|||..++-|+.++..|++.|+.+.| +|+.++++|-||+|+.||+...... +++..
T Consensus 355 ~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNf--RTft~ 432 (893)
T KOG0291|consen 355 SLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNF--RTFTS 432 (893)
T ss_pred eEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccccee--eeecC
Confidence 9999999999999999999999999999999999999999999999 6999999999999999999876543 33332
Q ss_pred -ccCCeEEEEECCCCCEEEEEECCC-eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC
Q psy10114 638 -HRQEVCGLKWSPDNQYLASGGNDN-RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 638 -H~~~VtsLafSpdg~~LaSGS~DG-tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t 715 (819)
..-+..|++..|.|..+..|+.|. .|++|++++|+.+..+.+|.++|.+++|+|++. ++++|+ .|++||+||+-.
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~-~LaS~S--WDkTVRiW~if~ 509 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGS-LLASGS--WDKTVRIWDIFS 509 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccC-eEEecc--ccceEEEEEeec
Confidence 345678899999999999999987 599999999999999999999999999999998 666665 999999999865
Q ss_pred C-ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--------------------CCCCEEE
Q psy10114 716 G-QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--------------------HSYRVLY 774 (819)
Q Consensus 716 g-~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--------------------H~~~Vts 774 (819)
. ..+.+++..+.+..++|+|+|+++++ ...||+|.+||...+.++..+.+ .....+.
T Consensus 510 s~~~vEtl~i~sdvl~vsfrPdG~elaV--aTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftt 587 (893)
T KOG0291|consen 510 SSGTVETLEIRSDVLAVSFRPDGKELAV--ATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTT 587 (893)
T ss_pred cCceeeeEeeccceeEEEEcCCCCeEEE--EEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEE
Confidence 4 46677888899999999999999999 66899999999988777655442 1246889
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 775 LAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 775 LafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+++|+||..|++|+....|++|++.++...++
T Consensus 588 i~ySaDG~~IlAgG~sn~iCiY~v~~~vllkk 619 (893)
T KOG0291|consen 588 ICYSADGKCILAGGESNSICIYDVPEGVLLKK 619 (893)
T ss_pred EEEcCCCCEEEecCCcccEEEEECchhheeee
Confidence 99999999999999999999999998765544
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=288.46 Aligned_cols=243 Identities=24% Similarity=0.475 Sum_probs=221.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc-------------------------------eEEEEEecCCCCeEE
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA-------------------------------KQVHKLVGHTARVGA 602 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg-------------------------------k~i~tl~gHs~~V~s 602 (819)
....++|..|++|+++||.|..|..|++|.+... ...+++.||+++|..
T Consensus 377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 3567999999999999999999999999988621 123457799999999
Q ss_pred EEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC
Q psy10114 603 LAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 603 Lawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h 680 (819)
..|+ .++|+++|.|+++++|.+++.. ......||..+|+++.|+|-|-++||+|.|++.++|......+++.+.+|
T Consensus 457 ~sFsPd~rfLlScSED~svRLWsl~t~s--~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifagh 534 (707)
T KOG0263|consen 457 CSFSPDRRFLLSCSEDSSVRLWSLDTWS--CLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGH 534 (707)
T ss_pred eeecccccceeeccCCcceeeeecccce--eEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccc
Confidence 9995 5699999999999999999866 45777899999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~ 759 (819)
.+.|.|++|+|+..++ ++| +.|++||+||+.+|..++.+ .|.++|.+++|||+|++|++ |+.||.|.+||+.++
T Consensus 535 lsDV~cv~FHPNs~Y~-aTG--SsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaS--g~ed~~I~iWDl~~~ 609 (707)
T KOG0263|consen 535 LSDVDCVSFHPNSNYV-ATG--SSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLAS--GDEDGLIKIWDLANG 609 (707)
T ss_pred ccccceEEECCccccc-ccC--CCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEee--cccCCcEEEEEcCCC
Confidence 9999999999998854 454 49999999999999999988 57889999999999999999 999999999999999
Q ss_pred cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 760 k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+.+..+.+|++.|.++.||.||..||+|+.|.+|++||+.....
T Consensus 610 ~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~ 653 (707)
T KOG0263|consen 610 SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIE 653 (707)
T ss_pred cchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcc
Confidence 99999999999999999999999999999999999999976543
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=280.91 Aligned_cols=279 Identities=24% Similarity=0.446 Sum_probs=243.1
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec-CCceEEEE
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV-SVAKQVHK 592 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl-~tgk~i~t 592 (819)
.....++.+++.+++++.++.+++|+..+.+......+.+|...|.+++|+|+|+++++|+.|++|+|||+ +.+..+++
T Consensus 162 v~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~ 241 (456)
T KOG0266|consen 162 VTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKT 241 (456)
T ss_pred eEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEE
Confidence 33444555577899999999999999976662223455789999999999999999999999999999999 56689999
Q ss_pred EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
+.+|...|++++| .++.+++|+.|++|++||+++++ ....+.+|.+.|++++|+++++.+++++.|+.|++||+.+
T Consensus 242 l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~--~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 242 LKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGE--CVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred ecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCe--EEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 9999999999999 47899999999999999999955 5689999999999999999999999999999999999999
Q ss_pred Cc--eeEEEecCCCC--EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CC---CeEEEEEccCCCEEEE
Q psy10114 671 MS--PLQTYTEHLAA--VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GS---QVCNLAWSKHSSELVS 742 (819)
Q Consensus 671 ~~--~i~t~~~h~~~--VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s---~V~sLafSpdg~~Las 742 (819)
+. +...+..+... +.+++|+|++.++++.. .|+.+++||+..+........ .. .+.+...++.+..+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~---~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s 396 (456)
T KOG0266|consen 320 GSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSAS---LDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS 396 (456)
T ss_pred CceeeeecccCCCCCCceeEEEECCCCcEEEEec---CCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE
Confidence 98 56777766555 99999999999888754 799999999999988877642 22 3445556788999998
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecC-CCCEEEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGH-SYRVLYLAMSPDGEAIVTGA--GDETLRFWNVF 799 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH-~~~VtsLafSpDG~~LaSGS--~DGtIrIWdl~ 799 (819)
|+.|+.|.+||..++..+..+.+| ...+..+++++..+++++++ .|+.+++|...
T Consensus 397 --g~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 397 --GSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred --EeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 899999999999999999999999 89999999999999999988 79999999864
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=255.89 Aligned_cols=282 Identities=20% Similarity=0.339 Sum_probs=244.4
Q ss_pred CCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc
Q psy10114 508 PELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 508 p~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg 587 (819)
+......|...+.+++..++++|.|..|.+|+.... ......+++|.++|..+.|.+|++.+++++.|.+|+.||+++|
T Consensus 44 ~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gd-ceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG 122 (338)
T KOG0265|consen 44 PGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGD-CENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETG 122 (338)
T ss_pred CCCcceEEEEEECCCCCeEeecCCcceEEEEecccc-ccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccc
Confidence 444455667777777889999999999999996433 4455678899999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 588 KQVHKLVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 588 k~i~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
++++.+++|..-|+++.. +...+.+|+.||++++||+++.+.. + .....-+++++.|..++..+.+|+-|+.|+
T Consensus 123 ~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~--~-t~~~kyqltAv~f~d~s~qv~sggIdn~ik 199 (338)
T KOG0265|consen 123 KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI--K-TFENKYQLTAVGFKDTSDQVISGGIDNDIK 199 (338)
T ss_pred eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchh--h-ccccceeEEEEEecccccceeeccccCcee
Confidence 999999999999999987 3558899999999999999986642 2 223456799999999999999999999999
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC----ceeEEEcC-----CCCeEEEEEcc
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG----QPMQCVDT-----GSQVCNLAWSK 735 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg----~~v~~l~~-----~s~V~sLafSp 735 (819)
+||++.+.....+.+|...|+.+..+++|..++.-+ .|.++++||++-- +++..+.. +.....++|+|
T Consensus 200 vWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsns---Md~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp 276 (338)
T KOG0265|consen 200 VWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNS---MDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSP 276 (338)
T ss_pred eeccccCcceEEeecccCceeeEEeccCCCcccccc---ccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccC
Confidence 999999999999999999999999999999877643 8999999999853 33444421 23466789999
Q ss_pred CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
+++.+.+ |+.|..+.+||..+...+..+.||.+.|.+++|+|...+|.+++.|.+|.+=++
T Consensus 277 ~~~~i~a--gs~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 277 NGTKITA--GSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI 337 (338)
T ss_pred CCCcccc--ccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence 9999988 899999999999999999999999999999999999999999999999987543
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=268.49 Aligned_cols=298 Identities=22% Similarity=0.406 Sum_probs=245.9
Q ss_pred eccCCCceeecCCCcCCcceEEEEEecC--C-eEEEEECCCeEEEEEcCC--CceEEEEec----------cCCCCCeEE
Q psy10114 496 KISRIPFKVLDAPELQDDFYLNLVDWSS--Q-NVLSVGLGSCVYLWSACT--SQVTRLCDL----------SADGNSVTS 560 (819)
Q Consensus 496 ~I~~~P~kvLdap~l~dDfyv~~ldwS~--~-~LLa~g~Dg~V~LWd~~t--g~~~~l~~l----------~~h~~~Vts 560 (819)
.|++--.+++. + .--+.+.+|++ + .+++++.+...++|++.. +.......+ ...+..|++
T Consensus 166 ~I~~~~~kvl~-~----~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~ 240 (524)
T KOG0273|consen 166 EIPSSKAKVLR-H----ESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTS 240 (524)
T ss_pred cccccceeecc-C----CCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcce
Confidence 45555555554 2 22356678886 3 577778888899999864 111111111 112468999
Q ss_pred EEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecc
Q psy10114 561 VAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGH 638 (819)
Q Consensus 561 LafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH 638 (819)
++|+.+|+.||+|+.||.++||+. .|..+.++..|.++|.++.|+ |++|++++.||++.+||..+++. ...+..|
T Consensus 241 L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~--~q~f~~~ 317 (524)
T KOG0273|consen 241 LDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV--KQQFEFH 317 (524)
T ss_pred EEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceE--EEeeeec
Confidence 999999999999999999999995 588899999999999999995 77999999999999999988764 3666777
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 639 ~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
..+-..+.|-. ...+++++.|+.|+|+.+....|+.++.+|.+.|.++.|+|.|. ++++++ .|+++++|+...+..
T Consensus 318 s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~-LLaS~S--dD~TlkiWs~~~~~~ 393 (524)
T KOG0273|consen 318 SAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGS-LLASCS--DDGTLKIWSMGQSNS 393 (524)
T ss_pred cCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCc-eEEEec--CCCeeEeeecCCCcc
Confidence 77767788864 45799999999999999999999999999999999999999998 555554 899999999988888
Q ss_pred eEEEc-CCCCeEEEEEccCCC---------EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe
Q psy10114 719 MQCVD-TGSQVCNLAWSKHSS---------ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 719 v~~l~-~~s~V~sLafSpdg~---------~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS 788 (819)
...+. |...|..+.|+|+|. .+++ ...|+.|++||+..+.+++++..|..+|.+++|||+|+++|+|+
T Consensus 394 ~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~s--as~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs 471 (524)
T KOG0273|consen 394 VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLAS--ASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGS 471 (524)
T ss_pred hhhhhhhccceeeEeecCCCCccCCCcCCceEEE--eecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecC
Confidence 77774 566799999999753 4555 66899999999999999999999999999999999999999999
Q ss_pred CCCcEEEEECCCCceeccc
Q psy10114 789 GDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 789 ~DGtIrIWdl~s~~~~~k~ 807 (819)
.||.|.+|++.+++..+..
T Consensus 472 ~dg~V~iws~~~~~l~~s~ 490 (524)
T KOG0273|consen 472 LDGCVHIWSTKTGKLVKSY 490 (524)
T ss_pred CCCeeEeccccchheeEee
Confidence 9999999999998866544
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=271.62 Aligned_cols=275 Identities=23% Similarity=0.456 Sum_probs=240.3
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
+-++.++.+.+++|..|++|+|||..+-+..+ .+.+|.+.|.|+.|. .+.+++|+.|.+|+|||+++++++.++.+
T Consensus 200 VYClQYDD~kiVSGlrDnTikiWD~n~~~c~~--~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlih 275 (499)
T KOG0281|consen 200 VYCLQYDDEKIVSGLRDNTIKIWDKNSLECLK--ILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIH 275 (499)
T ss_pred eEEEEecchhhhcccccCceEEeccccHHHHH--hhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhh
Confidence 55678899999999999999999998876544 678999999999986 55999999999999999999999999999
Q ss_pred CCCCeEEEEeCCceeeeccCCCeEEEEECCCCCc-cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee
Q psy10114 596 HTARVGALAWNGDMLSSGSRDRMILQRDVRTPNS-QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674 (819)
Q Consensus 596 Hs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~-~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i 674 (819)
|...|..+.|+.++++++|.|.++.+||+..+.. .....+.||...|..+.|+ .+++++++.|.+|++|++.+++.+
T Consensus 276 HceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efv 353 (499)
T KOG0281|consen 276 HCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFV 353 (499)
T ss_pred hcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeee
Confidence 9999999999999999999999999999987653 2345678999999999986 569999999999999999999999
Q ss_pred EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 675 ~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
+++.+|+..|-|+.+. ..++++|+ .|.+|++||+..|.+++.++ |..-|.++.| |.+.+++ |..||.|++
T Consensus 354 Rtl~gHkRGIAClQYr---~rlvVSGS--SDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVS--GaYDGkikv 424 (499)
T KOG0281|consen 354 RTLNGHKRGIACLQYR---DRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS--GAYDGKIKV 424 (499)
T ss_pred hhhhcccccceehhcc---CeEEEecC--CCceEEEEeccccHHHHHHhchHHhhhheee--cCceeee--ccccceEEE
Confidence 9999999999888874 34777765 99999999999999998885 4566899998 5678888 889999999
Q ss_pred EECCCCcE---------EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 754 WKYPTLTQ---------VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 754 WDl~s~k~---------l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
||+..+.. +.++..|+++|..+.| |...|++++.|.+|.+||+.++...+.+
T Consensus 425 Wdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~~~~ 485 (499)
T KOG0281|consen 425 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPSAAE 485 (499)
T ss_pred EecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCccccc
Confidence 99976543 3455679999999999 6778999999999999999887765544
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-27 Score=270.83 Aligned_cols=317 Identities=24% Similarity=0.411 Sum_probs=260.1
Q ss_pred CCCccchhhhcCCcccceeccCC-Cceeec--CCCcCCcceEEEEEec--CCeEEEEECCCeEEEEEcCC----------
Q psy10114 478 PVGPKSQKLLRSPRKATRKISRI-PFKVLD--APELQDDFYLNLVDWS--SQNVLSVGLGSCVYLWSACT---------- 542 (819)
Q Consensus 478 P~s~~s~~Ll~s~~k~~r~I~~~-P~kvLd--ap~l~dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~t---------- 542 (819)
.+++++.-++...++...++..+ +.+-+. +-....|..+.++ +. ...+.+++.||.+.+|....
T Consensus 152 ~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~Vvacf-F~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~k 230 (893)
T KOG0291|consen 152 DWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACF-FGANSLDLYTVSKDGALFVWTCDLRPPELDKAEK 230 (893)
T ss_pred EeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEE-eccCcceEEEEecCceEEEEEecCCCcccccccc
Confidence 56666666666566655444332 122211 1122334444443 33 44699999999999998761
Q ss_pred -------------Cce---------EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 543 -------------SQV---------TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 543 -------------g~~---------~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
++. .+..-+......|++.+|++..+.||+|-..|...+|++.....++.+.-...+|
T Consensus 231 d~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I 310 (893)
T KOG0291|consen 231 DEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKI 310 (893)
T ss_pred cccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeeccccee
Confidence 110 1112233344789999999999999999999999999999999999999888999
Q ss_pred EEEEeC--CceeeeccCC-CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE
Q psy10114 601 GALAWN--GDMLSSGSRD-RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 601 ~sLawn--g~~LaSGS~D-GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~ 677 (819)
..++|| |+.++.|+.. |.+.+|+..+.. .+.+.++|...+++++++|||+++|+|++||+|+|||.+++-+..+|
T Consensus 311 ~t~~~N~tGDWiA~g~~klgQLlVweWqsEs--YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF 388 (893)
T KOG0291|consen 311 LTVSFNSTGDWIAFGCSKLGQLLVWEWQSES--YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF 388 (893)
T ss_pred eEEEecccCCEEEEcCCccceEEEEEeeccc--eeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe
Confidence 999997 9999988765 899999998865 56888999999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC--CeEEEEEccCCCEEEEEEecCC-CeEEEE
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS--QVCNLAWSKHSSELVSTHGYSQ-NQILVW 754 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s--~V~sLafSpdg~~LastsGssD-g~I~IW 754 (819)
.+|.+.|+++.|+..|+.++.++ .||+||.||+...+..+++.... +..+++..|.|..+++ |..| -.|.+|
T Consensus 389 teHts~Vt~v~f~~~g~~llssS---LDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~A--G~~d~F~IfvW 463 (893)
T KOG0291|consen 389 TEHTSGVTAVQFTARGNVLLSSS---LDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCA--GAQDSFEIFVW 463 (893)
T ss_pred ccCCCceEEEEEEecCCEEEEee---cCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEe--eccceEEEEEE
Confidence 99999999999999999777765 89999999999999999886554 5678888888887777 5544 479999
Q ss_pred ECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 755 Dl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
++.+|+.+-.+.||.++|.+++|+|+|..|++||.|.+||+||+....
T Consensus 464 S~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~ 511 (893)
T KOG0291|consen 464 SVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS 511 (893)
T ss_pred EeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC
Confidence 999999999999999999999999999999999999999999998764
|
|
| >PF08145 BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR012953 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-31 Score=277.58 Aligned_cols=220 Identities=16% Similarity=0.120 Sum_probs=173.4
Q ss_pred cccceeecCCcccccchhhhHHHhhhccccCCCcccccccccCCccccCChhhhHHHHhhhcCCCCCCCCCCCC-----C
Q psy10114 285 RHHAATEENSNTDLDSRKLSKVQRNLMTHDFSSHRNKHLDQNMNMDLENENNEMEMENLATEDENTAPPLDLYD-----I 359 (819)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 359 (819)
--|||||+|||||||++++|+||+||+++|.|++|++++|+.||++++||+||||+|++||.+..+.+++|||+ |
T Consensus 4 ~~HIGYDi~GkkI~K~~~~d~LD~fL~~~ddp~~Wrtv~D~~~g~~v~Lt~eel~lI~ri~~g~~p~~~~dpy~~~vd~f 83 (260)
T PF08145_consen 4 YPHIGYDIDGKKIMKPAKGDALDKFLDSMDDPNYWRTVYDKKNGREVVLTDEELELIRRIQKGEFPDPGYDPYEPYVDWF 83 (260)
T ss_pred CCccCcCCCCCEecCCCchhHHHHHHHhccCccCCceeEcCCCCceeeeCHHHHHHHHHHHcCCCCCCCCCCCCCeeccc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCCCCCCCCCCCCCCCCceeCCCCCc-cchhhhccccCCCCCCCCCCCcccccCccccccHHHHHHHHhcccCCC--cCC
Q psy10114 360 MSPAYRSTSANLEVKADRYIPSRCGE-KWQTRFSFIPDNRTCSVVPKKTREVSGETSRDGLAYTCLLRNELLGAN--IEG 436 (819)
Q Consensus 360 ~~~~~~~~~~~~~~~~dRfiP~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~~~~--~~~ 436 (819)
++....+|++++|+++.|||||+.|+ .+++++++|++|++.+..+.+..+ ....| .||++. ...
T Consensus 84 t~~~~~~Pls~~pepKrrFiPSK~E~kkV~Klv~aIr~G~i~~~~~~~~~~-------~~~~y------dlW~d~~~~~~ 150 (260)
T PF08145_consen 84 TSEDEIHPLSNAPEPKRRFIPSKWEAKKVMKLVRAIRMGWIKPDKPKEEEE-------EPEFY------DLWADDDDDEE 150 (260)
T ss_pred CCcccccccCCCCCCCcccCCCHHHHHHHHHHHHHHHhCcCCccccccccc-------ccccc------ccccCcCcccc
Confidence 88999999999999999999999998 999999999999988755433221 23567 888887 233
Q ss_pred CCCCCCCcccccCCCccccccccCCCCCCCCcCCCCceeeCCCCccchhhhcCCcccceeccCCCceeecCCCcCCcceE
Q psy10114 437 VKGQCDEKRVIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYL 516 (819)
Q Consensus 437 ~~~~~~~~~~~~~p~~~~Lf~y~~~~~~~~~~~~~~~~~lsP~s~~s~~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv 516 (819)
.....+...+|+.+....-.+|+++.++...+.....|......+....++.....+.|+|+...--+.+..+.+-|.|+
T Consensus 151 ~~~~~~~ipAPK~~LPgh~eSYNPP~EYL~~~~E~~~w~~~~pedR~~~fiP~k~~sLR~Vp~Y~~~i~ErFeRCLDLYL 230 (260)
T PF08145_consen 151 KRRHPMHIPAPKLKLPGHAESYNPPPEYLPTEEEKKEWEEMDPEDRKKNFIPQKFDSLRKVPAYENFIKERFERCLDLYL 230 (260)
T ss_pred ccCCCCCCCCCCCCCCCCccccCCchHhccCHHHHHHHHhcCchhccccccchhhhhhhccchHHHHHHHHHHHhhhhhc
Confidence 33445667788888888999999998886654333333333222223344444455667777666555555555555554
Q ss_pred E
Q psy10114 517 N 517 (819)
Q Consensus 517 ~ 517 (819)
+
T Consensus 231 c 231 (260)
T PF08145_consen 231 C 231 (260)
T ss_pred C
Confidence 3
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This N-terminal domain is found in BOP1-like WD40 proteins. Bop1 is a nucleolar protein involved in rRNA processing, thereby controlling the cell cycle []. It is required for the maturation of the 25S and 5.8S ribosomal RNAs. It may serve as an essential factor in ribosome formation that coordinates processing of the spacer regions in pre-rRNA. The Pes1-Bop1 complex has several components: BOP1, GRWD1, PES1, ORC6L, and RPL3 and is involved in ribosome biogenesis and altered chromosome segregation. The overexpression of BOP1 increases the percentage of multipolar spindles in human cells. Deregulation of the BOP1 pathway may contribute to colorectal tumourigenesis in humans []. Elevated levels of Bop1 induces Bop1/WDR12 and Bop1/Pes1 subcomplexes and the assembly and integrity of the PeBoW complex is highly sensitive to changes in Bop1 protein levels []. Nop7p-Erb1p-Ytm1p, found in yeast, is potentially the homologous complex of Pes1-Bop1-WDR12 as it is involved in the control of ribosome biogenesis and S phase entry. The integrity of the PeBoW complex is required for ribosome biogenesis and cell proliferation in mammalian cells []. In Giardia, the species specific cytoskeleton protein, beta-giardin, interacts with Bop1 []. ; GO: 0006364 rRNA processing, 0005634 nucleus |
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=241.16 Aligned_cols=249 Identities=32% Similarity=0.533 Sum_probs=220.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|+++++++|+.||.+++||+.+++....+..|...+.++.|. ++.+++++.||.|++||+..+
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~ 83 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG 83 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence 456789999999999999999999999999999999998888999999999999994 558999999999999999875
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
+ ....+..|...+.++.|+++++.+++++.||.|.+||+++++....+..|...+.+++|+|++. ++++++ .|+.
T Consensus 84 ~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~--~~~~ 158 (289)
T cd00200 84 E--CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGT-FVASSS--QDGT 158 (289)
T ss_pred c--ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCC-EEEEEc--CCCc
Confidence 4 3466778888999999999988899888899999999999999999999999999999999976 444443 6999
Q ss_pred EEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEE
Q psy10114 708 IRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaS 786 (819)
|++||+++++.+..+. +...+.+++|+++++.+++ ++.++.|.+||..+++.+..+..|...+.+++|++++.++++
T Consensus 159 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 236 (289)
T cd00200 159 IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLS--SSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLAS 236 (289)
T ss_pred EEEEEccccccceeEecCccccceEEECCCcCEEEE--ecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEE
Confidence 9999999888877775 4458999999999999888 556999999999999999998889999999999999989998
Q ss_pred EeCCCcEEEEECCCCceec
Q psy10114 787 GAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~~~~ 805 (819)
++.||.|++||+.+++...
T Consensus 237 ~~~~~~i~i~~~~~~~~~~ 255 (289)
T cd00200 237 GSEDGTIRVWDLRTGECVQ 255 (289)
T ss_pred EcCCCcEEEEEcCCceeEE
Confidence 8889999999998765443
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=254.70 Aligned_cols=279 Identities=23% Similarity=0.364 Sum_probs=236.8
Q ss_pred CcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 512 dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
++.+..+++++.+.+++||.|..-++|+..+++ ....+.+|++.|+++.|+.+|.+||+|+.+|.|+||+..++....
T Consensus 65 ~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge--~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~ 142 (399)
T KOG0296|consen 65 DSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE--FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQW 142 (399)
T ss_pred CceEEEEeCCCCceEEecCCCceEEEEEccCCc--ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEE
Confidence 445556666666779999999999999999998 456888999999999999999999999999999999999999888
Q ss_pred EEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+......+.=+.|+ +..|++|+.||.+.+|.+.+.. ..+.+.||...+++=.|.|+|+.+++|..||+|++||..
T Consensus 143 ~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~--~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k 220 (399)
T KOG0296|consen 143 KLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQA--LCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK 220 (399)
T ss_pred EeecccCceEEEEecccccEEEeecCCCcEEEEECCCcc--eeeEecCCCCCcccccccCCCceEEEEecCceEEEEecC
Confidence 887555666666664 6799999999999999998853 457889999999999999999999999999999999999
Q ss_pred CCceeEEEecC---------------------------------------------------CCCEEEEEEcCCCCe--E
Q psy10114 670 SMSPLQTYTEH---------------------------------------------------LAAVKAIAWSPHHHG--L 696 (819)
Q Consensus 670 t~~~i~t~~~h---------------------------------------------------~~~VtsLafSPdg~~--L 696 (819)
+++++..+... ...+.++.+.|.... +
T Consensus 221 tg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL 300 (399)
T KOG0296|consen 221 TGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPL 300 (399)
T ss_pred CCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccch
Confidence 99887766510 001112222221111 3
Q ss_pred EEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEE
Q psy10114 697 LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA 776 (819)
Q Consensus 697 LaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLa 776 (819)
+++| +.||+|.+||+...+......+...|..+.|-+ ..++++ +..+|.|+.||.++|+.+.++.||...|.+++
T Consensus 301 ~A~G--~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t--~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ 375 (399)
T KOG0296|consen 301 AACG--SVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLT--ACANGKVRQWDARTGQLKFTYTGHQMGILDFA 375 (399)
T ss_pred hhcc--cccceEEEEecccchhheeccCCCceEEEEEcC-cchhee--eccCceEEeeeccccceEEEEecCchheeEEE
Confidence 4444 599999999999998888889999999999998 778888 77899999999999999999999999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEECC
Q psy10114 777 MSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 777 fSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
++|++++++|+|.|++.++|++.
T Consensus 376 ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 376 LSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EcCCCcEEEEecCCCeEEEEecC
Confidence 99999999999999999999874
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-27 Score=242.39 Aligned_cols=275 Identities=24% Similarity=0.401 Sum_probs=225.8
Q ss_pred eEEEEEecCC---eEEEEECCCeEEEEEcCCCc-eEEEEec-cCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--
Q psy10114 515 YLNLVDWSSQ---NVLSVGLGSCVYLWSACTSQ-VTRLCDL-SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA-- 587 (819)
Q Consensus 515 yv~~ldwS~~---~LLa~g~Dg~V~LWd~~tg~-~~~l~~l-~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg-- 587 (819)
.+-.++|++. .++++|.|+.|++|+...+. ......+ .+|+..|++++|+|.|++||+|+.|+++.||.-..+
T Consensus 16 r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~ef 95 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEF 95 (312)
T ss_pred cEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCce
Confidence 3556778865 58999999999999988432 3222222 478999999999999999999999999999987644
Q ss_pred eEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC-ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 588 KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN-SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 588 k~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~-~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
+++.+++||...|.|++| +|++||++++|++|.+|.+...+ ......++.|.+.|..+.|+|...+|++++.|++|+
T Consensus 96 ecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk 175 (312)
T KOG0645|consen 96 ECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIK 175 (312)
T ss_pred eEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEE
Confidence 789999999999999999 68999999999999999988443 345678899999999999999999999999999999
Q ss_pred EEECC---CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEE
Q psy10114 665 VWNLH---SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741 (819)
Q Consensus 665 IWDl~---t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~La 741 (819)
+|+-. ...+++++.+|...|.+++|++.|..++.+. .|++++||-..+.- ...+..++..+.|. ...++
T Consensus 176 ~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~s---dD~tv~Iw~~~~~~---~~~~sr~~Y~v~W~--~~~Ia 247 (312)
T KOG0645|consen 176 VYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCS---DDGTVSIWRLYTDL---SGMHSRALYDVPWD--NGVIA 247 (312)
T ss_pred EEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEec---CCcceEeeeeccCc---chhcccceEeeeec--ccceE
Confidence 99876 3468999999999999999999998666543 89999999865321 12345778899998 44566
Q ss_pred EEEecCCCeEEEEECCCC------cEEE-EEecCCCCEEEEEEecC-CCEEEEEeCCCcEEEEECC
Q psy10114 742 STHGYSQNQILVWKYPTL------TQVA-KLTGHSYRVLYLAMSPD-GEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 742 stsGssDg~I~IWDl~s~------k~l~-sl~gH~~~VtsLafSpD-G~~LaSGS~DGtIrIWdl~ 799 (819)
+ ++.|+.|++|.-... +.+. .-..|...|++++|.|. .+.|++|+.||.|++|.+.
T Consensus 248 S--~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 248 S--GGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred e--ccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 6 678999999986532 1222 23468889999999994 6799999999999999875
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=262.46 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=230.5
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t 626 (819)
..+.+|..+|+.+-|+|+-..+++++.|++|++||..+++..+.++||...|.+++| .|.++++++.|-.+++||..+
T Consensus 102 ~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~ 181 (406)
T KOG0295|consen 102 QKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT 181 (406)
T ss_pred hhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHH
Confidence 356678999999999999999999999999999999999999999999999999999 488999999999999999987
Q ss_pred CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
. ....+.+.+|...|.+++|-|.|.++++++.|.+|+.||+.++-+++++.+|...|..++.+.||. ++++++ .|.
T Consensus 182 ~-~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGt-i~As~s--~dq 257 (406)
T KOG0295|consen 182 F-FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGT-IIASCS--NDQ 257 (406)
T ss_pred H-HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCee-EEEecC--CCc
Confidence 5 245677889999999999999999999999999999999999999999999999999999999987 666665 899
Q ss_pred eEEEEECCCCceeEEE-cCCCCeEEEEEccC---------------CCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC
Q psy10114 707 CIRFWNTLTGQPMQCV-DTGSQVCNLAWSKH---------------SSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY 770 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l-~~~s~V~sLafSpd---------------g~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~ 770 (819)
++++|-+.++++...+ .+...|.+++|.|. +..+.+ ++.|+.|++||+.++.++.++.+|..
T Consensus 258 tl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s--~SrDktIk~wdv~tg~cL~tL~ghdn 335 (406)
T KOG0295|consen 258 TLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGS--GSRDKTIKIWDVSTGMCLFTLVGHDN 335 (406)
T ss_pred eEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEe--ecccceEEEEeccCCeEEEEEecccc
Confidence 9999999999776666 56778888888774 235555 88999999999999999999999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecccc
Q psy10114 771 RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 771 ~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
.|.+++|+|.|+||+++++|+++++||+.++++.....
T Consensus 336 wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ 373 (406)
T KOG0295|consen 336 WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE 373 (406)
T ss_pred eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC
Confidence 99999999999999999999999999999988765543
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=245.12 Aligned_cols=253 Identities=23% Similarity=0.353 Sum_probs=217.2
Q ss_pred EEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecC-----CceEEEEEecCCCCeEEEEe--CCceeeeccCCC
Q psy10114 546 TRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVS-----VAKQVHKLVGHTARVGALAW--NGDMLSSGSRDR 617 (819)
Q Consensus 546 ~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~-----tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DG 617 (819)
.....+++|.+.|+.++..+. .+.+.+++.|.++.+|++. .|..++.++||+..|..++. +|++.++++.|+
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~ 85 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG 85 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc
Confidence 334568899999999999886 4788899999999999875 46778999999999998888 788999999999
Q ss_pred eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC--CCCEEEEEEcCCC-C
Q psy10114 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH--LAAVKAIAWSPHH-H 694 (819)
Q Consensus 618 tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h--~~~VtsLafSPdg-~ 694 (819)
++++||+.+++ ..+.+.+|...|.+++|++|.+++++|+.|.+|++|+.... +..++..+ .+.|.++.|+|+. +
T Consensus 86 ~lrlWDl~~g~--~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 86 TLRLWDLATGE--STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred eEEEEEecCCc--EEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCC
Confidence 99999999975 56889999999999999999999999999999999998654 44444433 7899999999985 4
Q ss_pred eEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEE
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL 773 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vt 773 (819)
.++++++ .|+++++||+++.+....+ .+.+.++.+++||||...++ |+.||.+.+||++.++.+..+. |...|.
T Consensus 163 p~Ivs~s--~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcas--Ggkdg~~~LwdL~~~k~lysl~-a~~~v~ 237 (315)
T KOG0279|consen 163 PIIVSAS--WDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS--GGKDGEAMLWDLNEGKNLYSLE-AFDIVN 237 (315)
T ss_pred cEEEEcc--CCceEEEEccCCcchhhccccccccEEEEEECCCCCEEec--CCCCceEEEEEccCCceeEecc-CCCeEe
Confidence 4666665 9999999999998877665 56788999999999999999 9999999999999999987775 778999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 774 YLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+++|+|+.-.|+. +.+..|+|||++++......
T Consensus 238 sl~fspnrywL~~-at~~sIkIwdl~~~~~v~~l 270 (315)
T KOG0279|consen 238 SLCFSPNRYWLCA-ATATSIKIWDLESKAVVEEL 270 (315)
T ss_pred eEEecCCceeEee-ccCCceEEEeccchhhhhhc
Confidence 9999999766654 45567999999998765543
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=253.67 Aligned_cols=297 Identities=22% Similarity=0.360 Sum_probs=253.9
Q ss_pred ceeccCCCceeecCCCcCCcceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEE
Q psy10114 494 TRKISRIPFKVLDAPELQDDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571 (819)
Q Consensus 494 ~r~I~~~P~kvLdap~l~dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LA 571 (819)
.|.-+..|+|....-.. +-.++.+++.++ +.+++++.|++++|||+.+|++.. ++.+|-..|..+++|+...+++
T Consensus 133 ~rPeWHapwKl~rVi~g-HlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lkl--tltGhi~~vr~vavS~rHpYlF 209 (460)
T KOG0285|consen 133 PRPEWHAPWKLYRVISG-HLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKL--TLTGHIETVRGVAVSKRHPYLF 209 (460)
T ss_pred CCccccCcceehhhhhh-ccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEE--eecchhheeeeeeecccCceEE
Confidence 45566677765544333 345788888775 469999999999999999998754 7889999999999999999999
Q ss_pred EEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC
Q psy10114 572 VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP 649 (819)
Q Consensus 572 sGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp 649 (819)
+++.|+.|+.||++..+.++.+.||-..|.|++.. -+.|++|++|.++++||+++.. .+..+.||...|..+.+.|
T Consensus 210 s~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~--~V~~l~GH~~~V~~V~~~~ 287 (460)
T KOG0285|consen 210 SAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA--SVHVLSGHTNPVASVMCQP 287 (460)
T ss_pred EecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccc--eEEEecCCCCcceeEEeec
Confidence 99999999999999999999999999999999996 6799999999999999999966 5689999999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCe
Q psy10114 650 DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQV 728 (819)
Q Consensus 650 dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V 728 (819)
-+..+++|+.|++|++||++.++...++..|...|.+++.+|... .+++++ ...|+-|++..|..++.+. +...+
T Consensus 288 ~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~-~fASas---~dnik~w~~p~g~f~~nlsgh~~ii 363 (460)
T KOG0285|consen 288 TDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKEN-LFASAS---PDNIKQWKLPEGEFLQNLSGHNAII 363 (460)
T ss_pred CCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchh-hhhccC---CccceeccCCccchhhcccccccee
Confidence 888999999999999999999999999999999999999999876 556553 5679999999998887764 45568
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-----c---CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-----G---HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-----g---H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
.+++...|| .+++ |+++|.+.+||.+++...+..+ | ....|.+.+|...|..|+||..|.+|++|.-+.
T Consensus 364 ntl~~nsD~-v~~~--G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 364 NTLSVNSDG-VLVS--GGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred eeeeeccCc-eEEE--cCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 888887776 4444 8899999999999886655442 1 245689999999999999999999999998654
Q ss_pred Cc
Q psy10114 801 KV 802 (819)
Q Consensus 801 ~~ 802 (819)
..
T Consensus 441 ~a 442 (460)
T KOG0285|consen 441 HA 442 (460)
T ss_pred cc
Confidence 43
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-27 Score=242.32 Aligned_cols=253 Identities=18% Similarity=0.349 Sum_probs=227.8
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t 626 (819)
..+++|.+.|.++.|++|+++|++++.||.+.|||.-+...++.+.-.+..|...+| +|+.++.|+-|+...||++.+
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~ 128 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLST 128 (343)
T ss_pred EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccc
Confidence 467899999999999999999999999999999999999999999999999999999 688999999999999999986
Q ss_pred CC----ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 627 PN----SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 627 ~~----~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
.+ ....+.+.+|.+-+.+..|-. +.+|++++.|.+..+||+++++.+..|.+|.+.|.+++++|.....+++|+
T Consensus 129 ~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~- 206 (343)
T KOG0286|consen 129 RDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGG- 206 (343)
T ss_pred ccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecc-
Confidence 52 133466899999999999987 567999999999999999999999999999999999999994444666665
Q ss_pred CCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEec
Q psy10114 703 TADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSP 779 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSp 779 (819)
-|+..++||++.+.+++.+ .|.+.|++++|.|+|.-+++ |++|+..++||++..+++..+.. -..+|++++||.
T Consensus 207 -cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afat--GSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~ 283 (343)
T KOG0286|consen 207 -CDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFAT--GSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK 283 (343)
T ss_pred -cccceeeeeccCcceeEeecccccccceEEEccCCCeeee--cCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc
Confidence 8999999999999999998 47788999999999999999 99999999999999999988863 245799999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.|++|.+|..|.++.+||.-.++..-.
T Consensus 284 SGRlLfagy~d~~c~vWDtlk~e~vg~ 310 (343)
T KOG0286|consen 284 SGRLLFAGYDDFTCNVWDTLKGERVGV 310 (343)
T ss_pred cccEEEeeecCCceeEeeccccceEEE
Confidence 999999999999999999987776543
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-26 Score=254.12 Aligned_cols=300 Identities=18% Similarity=0.302 Sum_probs=241.0
Q ss_pred CCCceeecCCCcCCcceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEe-ccCCCCCeEEEEEcCCCCEEEEEec
Q psy10114 499 RIPFKVLDAPELQDDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCD-LSADGNSVTSVAWNERGNLVAVGTH 575 (819)
Q Consensus 499 ~~P~kvLdap~l~dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~-l~~h~~~VtsLafSpdG~~LAsGs~ 575 (819)
..|||..... ..+.-+++++.+++ +.++++|.||.|++||-.+|+...... -.+|.+.|.+++|+||++.+++++.
T Consensus 177 GPPFKFk~s~-r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~Sa 255 (603)
T KOG0318|consen 177 GPPFKFKSSF-REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSA 255 (603)
T ss_pred CCCeeeeecc-cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecC
Confidence 3456554333 23344688888774 689999999999999999998654322 3489999999999999999999999
Q ss_pred CceEEEeecCCceEEEEEecCC---CCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 576 HGYVQVWDVSVAKQVHKLVGHT---ARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 576 DGtI~IWDl~tgk~i~tl~gHs---~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
|.+++|||+.++++++++...+ ..-..+-|..+.|++.+.+|+|.+++..... ....+.+|...|+++..++|++
T Consensus 256 Dkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~--~~~~i~GHnK~ITaLtv~~d~~ 333 (603)
T KOG0318|consen 256 DKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPS--VLKVISGHNKSITALTVSPDGK 333 (603)
T ss_pred CceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCC--hhheecccccceeEEEEcCCCC
Confidence 9999999999999999886432 2333455678899999999999999998877 5688999999999999999999
Q ss_pred EEEEEECCCeEEEEECCCCce-----------eEEEec------------------------------------------
Q psy10114 653 YLASGGNDNRLYVWNLHSMSP-----------LQTYTE------------------------------------------ 679 (819)
Q Consensus 653 ~LaSGS~DGtI~IWDl~t~~~-----------i~t~~~------------------------------------------ 679 (819)
+|++|+.||.|.-||..++.. +..+..
T Consensus 334 ~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav 413 (603)
T KOG0318|consen 334 TIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAV 413 (603)
T ss_pred EEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEE
Confidence 999999999999999865421 000000
Q ss_pred --------------------C--------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce---eEEEcCCCCe
Q psy10114 680 --------------------H--------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP---MQCVDTGSQV 728 (819)
Q Consensus 680 --------------------h--------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~---v~~l~~~s~V 728 (819)
+ .-...+++++|++.. ++.|| .|+++++|.+..+.. ....++...+
T Consensus 414 ~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~-vaVGG--~Dgkvhvysl~g~~l~ee~~~~~h~a~i 490 (603)
T KOG0318|consen 414 LSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSE-VAVGG--QDGKVHVYSLSGDELKEEAKLLEHRAAI 490 (603)
T ss_pred cCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCE-EEEec--ccceEEEEEecCCcccceeeeecccCCc
Confidence 0 012346788888874 44555 899999999987653 3456788999
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEE-EEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV-AKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l-~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+.+++|||+.+|++ |...+.+.+||..+.+.. ..+.-|+.+|.+++|+|+.+.+|||+-|-.|.+|++..+....+
T Consensus 491 T~vaySpd~~yla~--~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~ 567 (603)
T KOG0318|consen 491 TDVAYSPDGAYLAA--GDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHII 567 (603)
T ss_pred eEEEECCCCcEEEE--eccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheE
Confidence 99999999999999 889999999999887663 33445999999999999999999999999999999988765533
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-26 Score=279.66 Aligned_cols=277 Identities=17% Similarity=0.334 Sum_probs=224.6
Q ss_pred CcceEEEEEec--CCeEEEEECCCeEEEEEcCCC----ce--EEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEe
Q psy10114 512 DDFYLNLVDWS--SQNVLSVGLGSCVYLWSACTS----QV--TRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVW 582 (819)
Q Consensus 512 dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg----~~--~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IW 582 (819)
....+.+++|+ ++.++++|.|+.|+||+..+. .. .....+. +...|.+++|++ ++.+||+|+.||+|++|
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lW 560 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVW 560 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEE
Confidence 45567888887 457999999999999997542 10 0112233 346799999987 47899999999999999
Q ss_pred ecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEEC-CCCCEEEEEE
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWS-PDNQYLASGG 658 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafS-pdg~~LaSGS 658 (819)
|+.+++.+..+.+|.+.|.+++|+ ++.|++|+.||.|++||++++.. ...+.. ...|+++.|+ +++..+++|+
T Consensus 561 d~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~--~~~~~~-~~~v~~v~~~~~~g~~latgs 637 (793)
T PLN00181 561 DVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS--IGTIKT-KANICCVQFPSESGRSLAFGS 637 (793)
T ss_pred ECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcE--EEEEec-CCCeEEEEEeCCCCCEEEEEe
Confidence 999999999999999999999994 56899999999999999987653 344544 3679999995 5799999999
Q ss_pred CCCeEEEEECCCCc-eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC------ceeEEE-cCCCCeEE
Q psy10114 659 NDNRLYVWNLHSMS-PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG------QPMQCV-DTGSQVCN 730 (819)
Q Consensus 659 ~DGtI~IWDl~t~~-~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg------~~v~~l-~~~s~V~s 730 (819)
.||.|++||+++.+ ++..+.+|...|.+++|. ++..++ +++ .|++|++||++.+ .++..+ .+...+..
T Consensus 638 ~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lv-s~s--~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~ 713 (793)
T PLN00181 638 ADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLV-SSS--TDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 713 (793)
T ss_pred CCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEE-EEE--CCCEEEEEeCCCCccccCCcceEEEcCCCCCeeE
Confidence 99999999998765 577888999999999997 555444 444 7999999999753 445555 35667889
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE-------------ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL-------------TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl-------------~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
++|+++++++++ |+.|+.|.+|+.....++..+ ..|...|.+++|++++..|++|+.||.|++|+
T Consensus 714 v~~s~~~~~las--gs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 714 VGLSVSDGYIAT--GSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EEEcCCCCEEEE--EeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 999999999988 889999999998765544322 23456699999999999999999999999999
Q ss_pred C
Q psy10114 798 V 798 (819)
Q Consensus 798 l 798 (819)
+
T Consensus 792 ~ 792 (793)
T PLN00181 792 M 792 (793)
T ss_pred c
Confidence 6
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=273.74 Aligned_cols=265 Identities=19% Similarity=0.366 Sum_probs=224.0
Q ss_pred EEEEEecC--CeEEEEECCCeEEEEEcCCCc---------eE--------------------EEEeccCCCCCeEEEEEc
Q psy10114 516 LNLVDWSS--QNVLSVGLGSCVYLWSACTSQ---------VT--------------------RLCDLSADGNSVTSVAWN 564 (819)
Q Consensus 516 v~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~---------~~--------------------~l~~l~~h~~~VtsLafS 564 (819)
++|.++++ ..++.|..|..|++|.....+ +. ....+-+|+++|..+.|+
T Consensus 381 v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 381 VTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 55666664 457777788999999987321 11 112356899999999999
Q ss_pred CCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCe
Q psy10114 565 ERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV 642 (819)
Q Consensus 565 pdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~V 642 (819)
|+.++|++++.|++|++|.+.+..++..++||..+|+++.|+ |-++||||.|++-++|...... +.+.+.+|-..|
T Consensus 461 Pd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~--PlRifaghlsDV 538 (707)
T KOG0263|consen 461 PDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK--PLRIFAGHLSDV 538 (707)
T ss_pred ccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC--chhhhccccccc
Confidence 999999999999999999999999999999999999999995 6699999999999999988754 568899999999
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 643 CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
.|++|+|+..++|+||.|.+|++||+.+|..++.|.+|.++|.+++|||+|.++ ++|+ .|+.|.+||+.+|+.+..+
T Consensus 539 ~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~L-aSg~--ed~~I~iWDl~~~~~v~~l 615 (707)
T KOG0263|consen 539 DCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYL-ASGD--EDGLIKIWDLANGSLVKQL 615 (707)
T ss_pred ceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceE-eecc--cCCcEEEEEcCCCcchhhh
Confidence 999999999999999999999999999999999999999999999999999855 4554 8999999999999988776
Q ss_pred -cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc------------------------EEEEEecCCCCEEEEEE
Q psy10114 723 -DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT------------------------QVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 723 -~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k------------------------~l~sl~gH~~~VtsLaf 777 (819)
.|.+.|.++.||.+|..|++ |+.|++|++||+..-. .+.++..-..+|.++.|
T Consensus 616 ~~Ht~ti~SlsFS~dg~vLas--gg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~F 693 (707)
T KOG0263|consen 616 KGHTGTIYSLSFSRDGNVLAS--GGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHF 693 (707)
T ss_pred hcccCceeEEEEecCCCEEEe--cCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEE
Confidence 57788999999999999999 8899999999975321 23344444556777777
Q ss_pred ecCCCEEEEE
Q psy10114 778 SPDGEAIVTG 787 (819)
Q Consensus 778 SpDG~~LaSG 787 (819)
...+-.+++|
T Consensus 694 trrNl~L~~g 703 (707)
T KOG0263|consen 694 TRRNLLLAVG 703 (707)
T ss_pred eccceeEEec
Confidence 7655444444
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=273.32 Aligned_cols=272 Identities=22% Similarity=0.359 Sum_probs=240.5
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----eEEEEEecCCC
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----KQVHKLVGHTA 598 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----k~i~tl~gHs~ 598 (819)
.+.++.++..+.+++++..+.... -+.+|++.|.++....+|.+|++|+.|.++++|.++++ .++....+|+.
T Consensus 336 ~~~laVATNs~~lr~y~~~~~~c~---ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~ 412 (775)
T KOG0319|consen 336 ESHLAVATNSPELRLYTLPTSYCQ---IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTN 412 (775)
T ss_pred cceEEEEeCCCceEEEecCCCceE---EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhccccc
Confidence 367888999999999998887765 46799999999996677899999999999999977443 34566789999
Q ss_pred CeEEEEeC---CceeeeccCCCeEEEEECCCCCc---cce----EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 599 RVGALAWN---GDMLSSGSRDRMILQRDVRTPNS---QSE----RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 599 ~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~---~~v----~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
.|.+++++ ...|+++|.|+++++|++...+. ... .....|...|++++.+|+++.+|+||.|.+.+||++
T Consensus 413 svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~l 492 (775)
T KOG0319|consen 413 SVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDL 492 (775)
T ss_pred ccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecc
Confidence 99999994 45999999999999999987221 111 133569999999999999999999999999999999
Q ss_pred CCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecC
Q psy10114 669 HSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 669 ~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGss 747 (819)
+......++.+|...|.++.|+|..+ ++++++ .|++|+||.+.+..++++++ |.+.|..+.|-.+|+.+++ ++.
T Consensus 493 e~~~l~~vLsGH~RGvw~V~Fs~~dq-~laT~S--gD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS--~~a 567 (775)
T KOG0319|consen 493 EQLRLLGVLSGHTRGVWCVSFSKNDQ-LLATCS--GDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLIS--AGA 567 (775)
T ss_pred cCceEEEEeeCCccceEEEEeccccc-eeEecc--CCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEe--ccC
Confidence 99999999999999999999999887 455554 69999999999999999997 7889999999999999999 789
Q ss_pred CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
||-|++|++++.++..++.+|.++|++++.++++..++||++||.|.+|.=.+.+
T Consensus 568 dGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te~ 622 (775)
T KOG0319|consen 568 DGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTEE 622 (775)
T ss_pred CCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCcHH
Confidence 9999999999999999999999999999999999999999999999999765544
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-27 Score=269.47 Aligned_cols=249 Identities=26% Similarity=0.473 Sum_probs=220.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS 629 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~ 629 (819)
+...|+++.|+++|+.+++++.|+.+++|+...++ ..+.+.+|...|.+++| ++.++++|+.|++|++||+....
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~- 236 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG- 236 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-
Confidence 36889999999999999999999999999998777 77788899999999999 67799999999999999994432
Q ss_pred cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 630 QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
...+++.+|...|++++|+|+|+.+++|+.|++|+|||+++++++..+.+|.+.|++++|++++..+++. + .|+.|+
T Consensus 237 ~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~-s--~d~~i~ 313 (456)
T KOG0266|consen 237 RNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA-S--YDGTIR 313 (456)
T ss_pred eEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc-C--CCccEE
Confidence 4568899999999999999999999999999999999999999999999999999999999999966664 3 799999
Q ss_pred EEECCCCc--eeEEEc-CC-C-CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC---EEEEEEecCC
Q psy10114 710 FWNTLTGQ--PMQCVD-TG-S-QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR---VLYLAMSPDG 781 (819)
Q Consensus 710 IWDl~tg~--~v~~l~-~~-s-~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~---VtsLafSpDG 781 (819)
+||+.+++ +...+. .. . .+++++|+|+++++++ +..|+.+++||+..+..+....+|... +.+...+++|
T Consensus 314 vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~--~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (456)
T KOG0266|consen 314 VWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLS--ASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGG 391 (456)
T ss_pred EEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEE--ecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCC
Confidence 99999999 445442 22 2 5899999999999999 889999999999999999999999775 3444567899
Q ss_pred CEEEEEeCCCcEEEEECCCCceecccc
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
+++++|+.|+.|++||+.++...++..
T Consensus 392 ~~i~sg~~d~~v~~~~~~s~~~~~~l~ 418 (456)
T KOG0266|consen 392 KLIYSGSEDGSVYVWDSSSGGILQRLE 418 (456)
T ss_pred CeEEEEeCCceEEEEeCCccchhhhhc
Confidence 999999999999999999876655443
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=251.94 Aligned_cols=249 Identities=24% Similarity=0.419 Sum_probs=226.5
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCC--ceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNG--DMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng--~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+++|.+.|.|+++.|...++++|+.|++++|||+.+|+...++.||...|..++++. .++++++.|+.|+.||+...
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~n 225 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYN 225 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhh
Confidence 4678999999999999999999999999999999999999999999999999999964 49999999999999999986
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
+ .++.+.||-..|.|++.+|.-+.|++|+.|.++++||+++...+..+.+|..+|.++.+.|....++. | +.|++
T Consensus 226 k--vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit-~--S~D~t 300 (460)
T KOG0285|consen 226 K--VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVIT-G--SHDST 300 (460)
T ss_pred h--hHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEE-e--cCCce
Confidence 6 56888999999999999999999999999999999999999999999999999999999998776665 3 38999
Q ss_pred EEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEE
Q psy10114 708 IRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 708 IrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaS 786 (819)
|++||++.|+....+ .+...+.+++.+|....+++ ++ ...|+-|+++.+..++.+.+|.+-|++++...|| ++++
T Consensus 301 vrlWDl~agkt~~tlt~hkksvral~lhP~e~~fAS--as-~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~ 376 (460)
T KOG0285|consen 301 VRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFAS--AS-PDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVS 376 (460)
T ss_pred EEEeeeccCceeEeeecccceeeEEecCCchhhhhc--cC-CccceeccCCccchhhccccccceeeeeeeccCc-eEEE
Confidence 999999999987776 46678999999999888887 43 4579999999999999999999999999998887 7889
Q ss_pred EeCCCcEEEEECCCCceeccc
Q psy10114 787 GAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~~~~k~ 807 (819)
|+++|.+.+||..++-..|+.
T Consensus 377 G~dng~~~fwdwksg~nyQ~~ 397 (460)
T KOG0285|consen 377 GGDNGSIMFWDWKSGHNYQRG 397 (460)
T ss_pred cCCceEEEEEecCcCcccccc
Confidence 999999999999998765543
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-26 Score=252.04 Aligned_cols=281 Identities=20% Similarity=0.363 Sum_probs=238.8
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC----ceEEEeecCCceEE
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH----GYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D----GtI~IWDl~tgk~i 590 (819)
.+...+++|.++++|...|.|+|||....+.....+++.-.++|..++|+.|++.|++.++. |.+..|| +|..+
T Consensus 63 tVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D--SG~Sv 140 (603)
T KOG0318|consen 63 TVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD--SGNSV 140 (603)
T ss_pred EEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEec--CCCcc
Confidence 45555666678999999999999998775555555666678999999999999988876542 3455555 78888
Q ss_pred EEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 591 HKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 591 ~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
-.+.||+.+|.+++|. +-++++|++|++|.+|+-.- .+....+..|..-|.++.|+|||..+|+.+.||++.+||
T Consensus 141 Gei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP--FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyD 218 (603)
T KOG0318|consen 141 GEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP--FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYD 218 (603)
T ss_pred ceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC--eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEc
Confidence 9999999999999994 44899999999999998543 234466778999999999999999999999999999999
Q ss_pred CCCCceeEEEe---cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC----CeEEEEEccCCCEE
Q psy10114 668 LHSMSPLQTYT---EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS----QVCNLAWSKHSSEL 740 (819)
Q Consensus 668 l~t~~~i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s----~V~sLafSpdg~~L 740 (819)
-.+++.+..+. +|++.|.+++|+||+..+++++ .|.++++||+.++++++++..+. +...+.|. ...|
T Consensus 219 Gktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~S---aDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~l 293 (603)
T KOG0318|consen 219 GKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVS---ADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHL 293 (603)
T ss_pred CCCccEEEEecCCCCccccEEEEEECCCCceEEEec---CCceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeE
Confidence 99999999998 8999999999999999888876 69999999999999999986543 44556665 5566
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
++ -+.+|.|.+++...+..+..+.||...|++++.++|+++|++|+.||.|.-|+..++..-..
T Consensus 294 It--VSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~ 357 (603)
T KOG0318|consen 294 IT--VSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRL 357 (603)
T ss_pred EE--EEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccccc
Confidence 76 34789999999999999999999999999999999999999999999999999998775533
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=236.37 Aligned_cols=286 Identities=19% Similarity=0.291 Sum_probs=232.6
Q ss_pred hhcCCcccceeccCCCceeecCCCcCCcceEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEc
Q psy10114 486 LLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWN 564 (819)
Q Consensus 486 Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafS 564 (819)
|..+..+.+.+++....-+--..-...|..+|.+.-.++ ..++++....|++||+.+++...+..+.+|...|+++.|.
T Consensus 13 LvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~ 92 (311)
T KOG0315|consen 13 LVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQ 92 (311)
T ss_pred EEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEe
Confidence 444555555555544332222222335667888887764 5667777789999999999888888999999999999999
Q ss_pred CCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCe
Q psy10114 565 ERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV 642 (819)
Q Consensus 565 pdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~V 642 (819)
.+|+.+++|++||+++|||++...+.+.++ |.++|+++..+ ...|++|..+|.|++||+....... .........|
T Consensus 93 ~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~-~liPe~~~~i 170 (311)
T KOG0315|consen 93 CDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH-ELIPEDDTSI 170 (311)
T ss_pred ecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccc-ccCCCCCcce
Confidence 999999999999999999999866655554 67999999994 5589999999999999998865432 2233445679
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCC------ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 643 CGLKWSPDNQYLASGGNDNRLYVWNLHSM------SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~DGtI~IWDl~t~------~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
.++...|||.+++.+.+.|..++|++-+. +++.+++.|.+-+....+||+++++++++ .|.+++||+..+.
T Consensus 171 ~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~s---sdktv~iwn~~~~ 247 (311)
T KOG0315|consen 171 QSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCS---SDKTVKIWNTDDF 247 (311)
T ss_pred eeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeec---CCceEEEEecCCc
Confidence 99999999999999999999999998654 46778899999999999999999877765 6999999999887
Q ss_pred -ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe
Q psy10114 717 -QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMS 778 (819)
Q Consensus 717 -~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafS 778 (819)
+....+ .+...+..++||.||+++++ |++|+.+++||++.++.+....+|.....+++..
T Consensus 248 ~kle~~l~gh~rWvWdc~FS~dg~YlvT--assd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 248 FKLELVLTGHQRWVWDCAFSADGEYLVT--ASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred eeeEEEeecCCceEEeeeeccCccEEEe--cCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 333333 34567999999999999999 8899999999999999999999999888887764
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=262.61 Aligned_cols=241 Identities=21% Similarity=0.420 Sum_probs=215.5
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccce
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v 632 (819)
...|..+.|.|+|+.|++|+..|.+.+|+..+-.....++.|...|.++.| ++..++||+.+|.|++|+..... +
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn---V 172 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN---V 172 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh---h
Confidence 467999999999999999999999999998655555556789999999999 68899999999999999987644 3
Q ss_pred EEEecc-cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 633 RRLVGH-RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 633 ~~l~gH-~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
+.+.+| ...|.+++|+|++..++++++||+|+|||....++...+.+|...|++++|+|... ++++|| .|..|++|
T Consensus 173 k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kg-Liasgs--kDnlVKlW 249 (464)
T KOG0284|consen 173 KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKG-LIASGS--KDNLVKLW 249 (464)
T ss_pred HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccc-eeEEcc--CCceeEee
Confidence 444454 48999999999999999999999999999999999899999999999999999865 777776 89999999
Q ss_pred ECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec-CCCEEEEEeC
Q psy10114 712 NTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP-DGEAIVTGAG 789 (819)
Q Consensus 712 Dl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp-DG~~LaSGS~ 789 (819)
|.++|+++.++ .|...|..+.|++++++|++ ++.|..++++|+++++.+..+++|...|++++|+| ...++.+|+.
T Consensus 250 DprSg~cl~tlh~HKntVl~~~f~~n~N~Llt--~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~ 327 (464)
T KOG0284|consen 250 DPRSGSCLATLHGHKNTVLAVKFNPNGNWLLT--GSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGS 327 (464)
T ss_pred cCCCcchhhhhhhccceEEEEEEcCCCCeeEE--ccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccC
Confidence 99999999887 56788999999999999999 88999999999999999999999999999999999 4567888999
Q ss_pred CCcEEEEECCCCce
Q psy10114 790 DETLRFWNVFSKVR 803 (819)
Q Consensus 790 DGtIrIWdl~s~~~ 803 (819)
||.|..|.+...+.
T Consensus 328 Dgsvvh~~v~~~~p 341 (464)
T KOG0284|consen 328 DGSVVHWVVGLEEP 341 (464)
T ss_pred CCceEEEecccccc
Confidence 99999999984443
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-27 Score=250.29 Aligned_cols=306 Identities=18% Similarity=0.281 Sum_probs=250.1
Q ss_pred hhhcCCcccceeccCCCceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCC-CceEEEEeccCCCCCeEEEEE
Q psy10114 485 KLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACT-SQVTRLCDLSADGNSVTSVAW 563 (819)
Q Consensus 485 ~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~h~~~VtsLaf 563 (819)
.++.......+++|....+++.++ .+..+...++.+|+++++++.|.+..+|++.. ..+....++.+|..+|..+.|
T Consensus 200 sll~Dh~c~~~qip~qt~qil~~h--tdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~w 277 (519)
T KOG0293|consen 200 SLLSDHFCGRLQIPSQTWQILQDH--TDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMW 277 (519)
T ss_pred hhhhhcccCcccCCchhhhhHhhC--CCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEE
Confidence 344445555677877777887665 46777777888899999999999999999754 344555678899999999999
Q ss_pred cCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecc-c
Q psy10114 564 NERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGH-R 639 (819)
Q Consensus 564 SpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH-~ 639 (819)
|||.++|++++.|..+.+||+.+|.....+. ++...+.+.+| +|..+++|+.|+.|..||.+.... ....+- .
T Consensus 278 SPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~---~~W~gvr~ 354 (519)
T KOG0293|consen 278 SPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNIL---GNWEGVRD 354 (519)
T ss_pred CCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchh---hccccccc
Confidence 9999999999999999999999999888776 45788999999 677999999999999999987542 222222 2
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee
Q psy10114 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v 719 (819)
..|.+++.++||+++++.+.|..|++++.++......+. ...+|++++.|.+++..++.- .+..+++||++..+.+
T Consensus 355 ~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL---~~qei~LWDl~e~~lv 430 (519)
T KOG0293|consen 355 PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNL---QDQEIHLWDLEENKLV 430 (519)
T ss_pred ceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEc---ccCeeEEeecchhhHH
Confidence 569999999999999999999999999998766554443 467899999999999888765 7999999999977776
Q ss_pred EEEcC---CCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC-CCEEEEEeCCCcEE
Q psy10114 720 QCVDT---GSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD-GEAIVTGAGDETLR 794 (819)
Q Consensus 720 ~~l~~---~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD-G~~LaSGS~DGtIr 794 (819)
+.+.. +.-+-.-+|-- +..++++ |++|++|+||+..+++++.++.||...|++++|+|. -.++|+||+||+||
T Consensus 431 ~kY~Ghkq~~fiIrSCFgg~~~~fiaS--GSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIR 508 (519)
T KOG0293|consen 431 RKYFGHKQGHFIIRSCFGGGNDKFIAS--GSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIR 508 (519)
T ss_pred HHhhcccccceEEEeccCCCCcceEEe--cCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence 66532 22244445543 3356666 999999999999999999999999999999999994 56889999999999
Q ss_pred EEECCCC
Q psy10114 795 FWNVFSK 801 (819)
Q Consensus 795 IWdl~s~ 801 (819)
||.....
T Consensus 509 IWg~~~~ 515 (519)
T KOG0293|consen 509 IWGPSDN 515 (519)
T ss_pred EecCCcc
Confidence 9988654
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=243.53 Aligned_cols=271 Identities=18% Similarity=0.327 Sum_probs=247.2
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
+-.+++++.|+.=.+-+-++|...- ++.+|.+.|.+...+.+....|+++.|-+-+|||.-+|..+.++. |..-|.+
T Consensus 29 g~flisa~kd~~pmlr~g~tgdwig--tfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~ 105 (334)
T KOG0278|consen 29 GYFLISASKDGKPMLRNGDTGDWIG--TFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKA 105 (334)
T ss_pred ceEEEEeccCCCchhccCCCCCcEE--eeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeee
Confidence 4468899999999999999998754 788999999999999999999999999999999999999998886 8888999
Q ss_pred EEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC
Q psy10114 603 LAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 603 Law--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h 680 (819)
++| +.+.|++|+.++.++++|++.++. +...+.+|++.|..+.|....+.+++++.|++|++||.+++..++++. .
T Consensus 106 ~af~~ds~~lltgg~ekllrvfdln~p~A-pp~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~ 183 (334)
T KOG0278|consen 106 VAFSQDSNYLLTGGQEKLLRVFDLNRPKA-PPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-F 183 (334)
T ss_pred EEecccchhhhccchHHHhhhhhccCCCC-CchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-c
Confidence 999 567999999999999999998875 457789999999999999999999999999999999999999999986 5
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k 760 (819)
..+|+++..+++|+.+..+ ..+.|.+||..+-..++..+....|.+...+|+...+++ |++|..++.||+.++.
T Consensus 184 ~s~VtSlEvs~dG~ilTia----~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVa--Gged~~~~kfDy~Tge 257 (334)
T KOG0278|consen 184 NSPVTSLEVSQDGRILTIA----YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVA--GGEDFKVYKFDYNTGE 257 (334)
T ss_pred CCCCcceeeccCCCEEEEe----cCceeEEeccccccceeeccCccccccccccCCCceEEe--cCcceEEEEEeccCCc
Confidence 7889999999999965554 568899999999999999999999999999999987777 9999999999999999
Q ss_pred EEEEE-ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 761 QVAKL-TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 761 ~l~sl-~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
.+..+ ++|.++|.|+.|+|||...++||.||+||+|....++..
T Consensus 258 Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 258 EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred eeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 99986 899999999999999999999999999999998876543
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-26 Score=263.55 Aligned_cols=279 Identities=24% Similarity=0.332 Sum_probs=245.4
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
+-.+.+..|.++++++++.++.|++||..++.... ..+.+|.+.|.++++...+..+++|+.|.++++||..+|++...
T Consensus 208 ~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~-~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~ 286 (537)
T KOG0274|consen 208 DHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLIL-TRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHS 286 (537)
T ss_pred cchhhhheeecCeEEecCCCceeEEeecccceEEE-eeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEE
Confidence 33455566778999999999999999999987654 34889999999999998889999999999999999999999999
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~ 672 (819)
+.+|.+.|.++...+..+++|+.|.+|++|++.++. .+..+.+|.+.|.++..+ +..+++|+.|++|++||..+++
T Consensus 287 l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~--~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~ 362 (537)
T KOG0274|consen 287 LQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGA--CLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK 362 (537)
T ss_pred ecCCCceEEEEEccCceEeeccCCceEEEEeccCcc--eEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhce
Confidence 999999999999999999999999999999999866 457777799999999997 8899999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-ceeEEEcCCCC-eEEEEEccCCCEEEEEEecCCCe
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG-QPMQCVDTGSQ-VCNLAWSKHSSELVSTHGYSQNQ 750 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l~~~s~-V~sLafSpdg~~LastsGssDg~ 750 (819)
++.++.+|...|+++.+.+. ..+.+|+ .|++|++||+++. +++..+.+... +..+ ...++.+++ +..|+.
T Consensus 363 cl~sl~gH~~~V~sl~~~~~--~~~~Sgs--~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l--~~~~~~Lvs--~~aD~~ 434 (537)
T KOG0274|consen 363 CLKSLSGHTGRVYSLIVDSE--NRLLSGS--LDTTIKVWDLRTKRKCIHTLQGHTSLVSSL--LLRDNFLVS--SSADGT 434 (537)
T ss_pred eeeeecCCcceEEEEEecCc--ceEEeee--eccceEeecCCchhhhhhhhcCCccccccc--ccccceeEe--cccccc
Confidence 99999999999999988775 3566665 8999999999999 88888865444 4333 346778888 889999
Q ss_pred EEEEECCCCcEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 751 ILVWKYPTLTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 751 I~IWDl~s~k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
|++||..+++.+..+.+ |.+.|..+++. ...+++++.||++++||+.+++....
T Consensus 435 Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~ 489 (537)
T KOG0274|consen 435 IKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRT 489 (537)
T ss_pred EEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhh
Confidence 99999999999999998 67889998886 46788899999999999999887654
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=231.03 Aligned_cols=272 Identities=21% Similarity=0.335 Sum_probs=235.2
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.++++.++ +++.+++|.|.+|++||...|.+.+ ++.+|...|..++.+.|...+++|+.|..+++||+++|+.++.
T Consensus 19 aV~avryN~dGnY~ltcGsdrtvrLWNp~rg~lik--tYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr 96 (307)
T KOG0316|consen 19 AVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIK--TYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRR 96 (307)
T ss_pred ceEEEEEccCCCEEEEcCCCceEEeecccccceee--eecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeee
Confidence 35566665 7899999999999999999998765 6789999999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
+.+|.+.|+.++|| ...+++|+.|.++++||.++....+++.+....+.|.++..+ +..+++|+.||+++.||++.
T Consensus 97 ~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~ 174 (307)
T KOG0316|consen 97 FRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRK 174 (307)
T ss_pred cccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeec
Confidence 99999999999996 458999999999999999999888889998889999999886 56799999999999999999
Q ss_pred CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCC--eEEEEEccCCCEEEEEEecC
Q psy10114 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQ--VCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 671 ~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~--V~sLafSpdg~~LastsGss 747 (819)
|+....+- ..+|++++|+++++..++++ .|+++++.|-.+|+.+.... +.+. -...+++.....+++ |++
T Consensus 175 G~l~sDy~--g~pit~vs~s~d~nc~La~~---l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~s--gSE 247 (307)
T KOG0316|consen 175 GTLSSDYF--GHPITSVSFSKDGNCSLASS---LDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFS--GSE 247 (307)
T ss_pred ceeehhhc--CCcceeEEecCCCCEEEEee---ccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEe--ccC
Confidence 98766554 45899999999999888765 89999999999999887764 3222 344566666667777 999
Q ss_pred CCeEEEEECCCCcEEEEEecCCCC-EEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYR-VLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~-VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
||.|.+||+...+++..+..+... |.+++++|.-..+++++. +.+.+|.-
T Consensus 248 DG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~~ 298 (307)
T KOG0316|consen 248 DGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWYQ 298 (307)
T ss_pred CceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceeceee
Confidence 999999999999999999988887 899999998777777654 45566643
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=232.32 Aligned_cols=250 Identities=20% Similarity=0.338 Sum_probs=221.9
Q ss_pred EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECC
Q psy10114 548 LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~ 625 (819)
+..+..++++|.++.|+-||++..+++.|.+|++|+...+.+++++.+|...|..++. ++..+++|+.|+.+.+||+.
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence 3456778999999999999999999999999999999999999999999999998877 67799999999999999999
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC--ceeEEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM--SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~--~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
+++ ..+++.+|..+|+.++|+.+...+++|+.|.++++||.++. +|++.+.+....|.++....+ .+++|+
T Consensus 90 TGk--v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~h---eIvaGS-- 162 (307)
T KOG0316|consen 90 TGK--VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEH---EIVAGS-- 162 (307)
T ss_pred cCe--eeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEeccc---EEEeec--
Confidence 987 46899999999999999999999999999999999999764 689999999999999998754 455554
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCE--EEEEEecCC
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRV--LYLAMSPDG 781 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~V--tsLafSpDG 781 (819)
.||++|.||++.|+..... .+.+|++++|+++++..++ +..|+.+++.|-.+|+.+++++||...- ...+++...
T Consensus 163 ~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~La--~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsd 239 (307)
T KOG0316|consen 163 VDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSLA--SSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSD 239 (307)
T ss_pred cCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEEE--eeccceeeecccchhHHHHHhcccccceeeeeeeecccc
Confidence 9999999999999765433 4789999999999999998 8899999999999999999999997653 455677778
Q ss_pred CEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
..+++|++||.|.+||+.......+.
T Consensus 240 thV~sgSEDG~Vy~wdLvd~~~~sk~ 265 (307)
T KOG0316|consen 240 THVFSGSEDGKVYFWDLVDETQISKL 265 (307)
T ss_pred eeEEeccCCceEEEEEeccceeeeee
Confidence 89999999999999999887765554
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=251.40 Aligned_cols=235 Identities=25% Similarity=0.453 Sum_probs=207.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
....|.|+.+. ...+++|..|.+|+|||..+..+.+.+.||++.|.|+.++...+++||.|.+|++||+.+++. +.
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~--l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEP--LN 271 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCch--hh
Confidence 35789999985 557999999999999999999999999999999999999999999999999999999999874 57
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc---eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS---PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~---~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
++.+|...|..+.|+ +.++++++.|.++.+||+.+.. +.+.+.+|.++|+.+.|+.. ++++++ .|++|++
T Consensus 272 tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k---yIVsAS--gDRTikv 344 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSAS--GDRTIKV 344 (499)
T ss_pred HHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc---eEEEec--CCceEEE
Confidence 889999999999997 5699999999999999998765 33456799999999999754 444444 6999999
Q ss_pred EECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 711 WNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 711 WDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
|++.+++.++.+. |...|.++.+ .|+.+++ |++|++|++||+..|..+..++||..-|.++.| |.+.|++|+.
T Consensus 345 W~~st~efvRtl~gHkRGIAClQY--r~rlvVS--GSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVSGaY 418 (499)
T KOG0281|consen 345 WSTSTCEFVRTLNGHKRGIACLQY--RDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAY 418 (499)
T ss_pred Eeccceeeehhhhcccccceehhc--cCeEEEe--cCCCceEEEEeccccHHHHHHhchHHhhhheee--cCceeeeccc
Confidence 9999999999884 5667877775 6777777 999999999999999999999999999999999 6779999999
Q ss_pred CCcEEEEECCCCceec
Q psy10114 790 DETLRFWNVFSKVRSQ 805 (819)
Q Consensus 790 DGtIrIWdl~s~~~~~ 805 (819)
||+|++||+..+....
T Consensus 419 DGkikvWdl~aaldpr 434 (499)
T KOG0281|consen 419 DGKIKVWDLQAALDPR 434 (499)
T ss_pred cceEEEEecccccCCc
Confidence 9999999998876543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-25 Score=252.32 Aligned_cols=301 Identities=17% Similarity=0.237 Sum_probs=228.7
Q ss_pred cceeccCCCceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEE-----------EEeccCCCCCeEEE
Q psy10114 493 ATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTR-----------LCDLSADGNSVTSV 561 (819)
Q Consensus 493 ~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~-----------l~~l~~h~~~VtsL 561 (819)
+.|++...|.|.-. --++..+....|+++++++++.+..+..|+...+.... ...+.+|.+.|.++
T Consensus 5 k~rh~~g~~~k~~~---~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v 81 (493)
T PTZ00421 5 RFRHTQGVPARPDR---HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDV 81 (493)
T ss_pred cccccccccCCccc---ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEE
Confidence 34555555544221 12344455667888888888888777788765442210 01256799999999
Q ss_pred EEcC-CCCEEEEEecCceEEEeecCCc-------eEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCcc
Q psy10114 562 AWNE-RGNLVAVGTHHGYVQVWDVSVA-------KQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 562 afSp-dG~~LAsGs~DGtI~IWDl~tg-------k~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
+|+| ++++|++|+.||+|++||+.++ +.+..+.+|...|.+++|+ ++.|++|+.|++|++||+++++
T Consensus 82 ~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~-- 159 (493)
T PTZ00421 82 AFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK-- 159 (493)
T ss_pred EEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe--
Confidence 9999 8899999999999999999765 3567889999999999995 3589999999999999999865
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCC-EEEEEEcCCCCeEEEEEc-cCCCCeE
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA-VKAIAWSPHHHGLLASGG-GTADRCI 708 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~-VtsLafSPdg~~LLaSGg-Gs~DgtI 708 (819)
....+.+|...|.+++|+|+|++|++|+.|++|++||+++++.+..+.+|.+. +..+.|.+++..++++|. ++.|+.|
T Consensus 160 ~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~V 239 (493)
T PTZ00421 160 AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQI 239 (493)
T ss_pred EEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeE
Confidence 45677889999999999999999999999999999999999999999888765 456789999887777662 2468999
Q ss_pred EEEECCCCc-eeEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEecCCCEE
Q psy10114 709 RFWNTLTGQ-PMQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG-HSYRVLYLAMSPDGEAI 784 (819)
Q Consensus 709 rIWDl~tg~-~v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g-H~~~VtsLafSpDG~~L 784 (819)
++||+++.. +.... .....+....|+++++.++++ |..|+.|++||+.+++.+..... +..++.+++|.|.-.
T Consensus 240 klWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lg-gkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~-- 316 (493)
T PTZ00421 240 MLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIG-SKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWS-- 316 (493)
T ss_pred EEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEE-EeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccccc--
Confidence 999998754 33333 233456677899999988884 44699999999999988776543 455688899988532
Q ss_pred EEEeCCCcEEEEECCCC
Q psy10114 785 VTGAGDETLRFWNVFSK 801 (819)
Q Consensus 785 aSGS~DGtIrIWdl~s~ 801 (819)
+-...-+..|++.+...
T Consensus 317 ~dv~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 317 LDTRKCEIARFYALTYH 333 (493)
T ss_pred ccccceeeeEEEEecCC
Confidence 22222345577777543
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=255.62 Aligned_cols=284 Identities=21% Similarity=0.371 Sum_probs=244.1
Q ss_pred CCcCCcceEEEEEecCCe-EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 508 PELQDDFYLNLVDWSSQN-VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 508 p~l~dDfyv~~ldwS~~~-LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
++.+.| +..++.+.+. +++.+.++.+++|+..+.+..+. +. .+.+.+..|.|.++++++|...|.+.++|+.+
T Consensus 370 ~GHR~d--VRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRT--i~--~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS 443 (888)
T KOG0306|consen 370 GGHRSD--VRSLCVSSDSILLASGAGESIKIWNRDTLKCIRT--IT--CGYILASKFVPGDRYIVLGTKNGELQVFDLAS 443 (888)
T ss_pred ccchhh--eeEEEeecCceeeeecCCCcEEEEEccCcceeEE--ec--cccEEEEEecCCCceEEEeccCCceEEEEeeh
Confidence 333444 5667777665 55556678999999999887664 33 35899999999999999999999999999999
Q ss_pred ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC-----ccceE-----EEecccCCeEEEEECCCCCEE
Q psy10114 587 AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN-----SQSER-----RLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~-----~~~v~-----~l~gH~~~VtsLafSpdg~~L 654 (819)
...+.+.+.|.+.+++++. ++..+++||.|.+|++||..-.. ...+. ..-.-.+.|.|+++||||++|
T Consensus 444 ~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~L 523 (888)
T KOG0306|consen 444 ASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLL 523 (888)
T ss_pred hhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEE
Confidence 9999999999999999999 67799999999999999975211 11111 112235689999999999999
Q ss_pred EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEE
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAW 733 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLaf 733 (819)
|++--|++|+||-+.+.+..-++.+|.-+|.|+..+||++ ++++|+ .|++|++|-+.-|.+-+++ .|+..|.++.|
T Consensus 524 aVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSk-livTgS--ADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F 600 (888)
T KOG0306|consen 524 AVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSK-LIVTGS--ADKNVKIWGLDFGDCHKSFFAHDDSVMSVQF 600 (888)
T ss_pred EEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcC-eEEecc--CCCceEEeccccchhhhhhhcccCceeEEEE
Confidence 9999999999999999998889999999999999999998 555554 8999999999999998876 68899999999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.|....+++ ++.|+.|+-||-...+.+..+.+|...|.+++.+|+|.+++++|.|.+||+|.-....
T Consensus 601 ~P~~~~FFt--~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 601 LPKTHLFFT--CGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDEI 667 (888)
T ss_pred cccceeEEE--ecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCcc
Confidence 998888887 6799999999999999999999999999999999999999999999999999987643
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-26 Score=251.81 Aligned_cols=272 Identities=20% Similarity=0.304 Sum_probs=242.4
Q ss_pred EEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+.++++++. .++++-.+|.|.|||.++....+..+ ..+-+|++..|-...+++++|+.|+.|+||+..+++.+.++
T Consensus 16 VKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfe--V~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~F 93 (794)
T KOG0276|consen 16 VKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFE--VSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTF 93 (794)
T ss_pred eeeeecCCCCceEEEeeecCeeEEEecccceeeeeee--ecccchhhheeeeccceEEEecCCceEEEEecccceeeEEe
Confidence 455666654 68999999999999999988776444 45789999999999999999999999999999999999999
Q ss_pred ecCCCCeEEEEeCCc--eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCC
Q psy10114 594 VGHTARVGALAWNGD--MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 594 ~gHs~~V~sLawng~--~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t 670 (819)
..|+.-|.|++.++. +++++|+|-+|++||.+.. ....+++.||..-|.+++|+| |.+.+|+++-|++|+||.+.+
T Consensus 94 eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs 172 (794)
T KOG0276|consen 94 EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGS 172 (794)
T ss_pred eccccceeeeeecCCCCeEEecCCccEEEEeeccCc-eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCC
Confidence 999999999999654 8999999999999999874 356789999999999999999 678999999999999999999
Q ss_pred CceeEEEecCCCCEEEEEEcCCCC-eEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 671 MSPLQTYTEHLAAVKAIAWSPHHH-GLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 671 ~~~i~t~~~h~~~VtsLafSPdg~-~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssD 748 (819)
..+..++++|...|+++.+-+.|. -.+++|+ .|.+|++||.++..++++++ |...|..+.|+|.-..+++ |++|
T Consensus 173 ~~~nfTl~gHekGVN~Vdyy~~gdkpylIsga--DD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiis--gsED 248 (794)
T KOG0276|consen 173 PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGA--DDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIIS--GSED 248 (794)
T ss_pred CCCceeeeccccCcceEEeccCCCcceEEecC--CCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEE--ecCC
Confidence 999999999999999999987652 2455554 89999999999999999996 6788999999999998888 9999
Q ss_pred CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 749 NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
|++++|+..+.++..++.-..++|.+++-.+.++.++.|.++|.|.
T Consensus 249 GTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~ 294 (794)
T KOG0276|consen 249 GTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVT 294 (794)
T ss_pred ccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEE
Confidence 9999999999998888887888999999999888888888777654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-25 Score=266.83 Aligned_cols=261 Identities=18% Similarity=0.329 Sum_probs=213.3
Q ss_pred CCeEEEEEcCCCceEEE---EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----e----EEEEEecCCCCe
Q psy10114 532 GSCVYLWSACTSQVTRL---CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----K----QVHKLVGHTARV 600 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l---~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----k----~i~tl~gHs~~V 600 (819)
+|.+++|+..+.+.... ..+..|.+.|++++|+++|+++|+|+.||.|+|||..+. . ....+. +...+
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence 56677787765544322 234458899999999999999999999999999997542 1 122333 35678
Q ss_pred EEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEE
Q psy10114 601 GALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 601 ~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t 676 (819)
.+++|+ +..|++|+.||+|++||+.+++ ....+.+|.+.|.+++|+| ++.+|++|+.||+|++||++++..+..
T Consensus 536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~--~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~ 613 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQ--LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGT 613 (793)
T ss_pred eeEEeccCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 999994 5799999999999999998754 4577889999999999997 789999999999999999999998888
Q ss_pred EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEE
Q psy10114 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 677 ~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IW 754 (819)
+..+ ..|.+++|++.....+++|+ .|+.|++||+++++ .+..+ .+...|.++.|. ++..+++ ++.|+.|++|
T Consensus 614 ~~~~-~~v~~v~~~~~~g~~latgs--~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs--~s~D~~ikiW 687 (793)
T PLN00181 614 IKTK-ANICCVQFPSESGRSLAFGS--ADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVS--SSTDNTLKLW 687 (793)
T ss_pred EecC-CCeEEEEEeCCCCCEEEEEe--CCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEE--EECCCEEEEE
Confidence 8754 68999999665444566665 89999999998865 34343 567789999997 7788887 7789999999
Q ss_pred ECCC------CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 755 KYPT------LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 755 Dl~s------~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
|+.. .+.+.++.+|...+..++|++++++|++|+.||.|++|+....
T Consensus 688 d~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 688 DLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred eCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence 9974 3567889999999999999999999999999999999997654
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=251.86 Aligned_cols=273 Identities=17% Similarity=0.364 Sum_probs=231.8
Q ss_pred eEEEEEecC---CeEEEEECCCeEEEEEcCC-CceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 515 YLNLVDWSS---QNVLSVGLGSCVYLWSACT-SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS~---~~LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
-++++.|-+ ..++++|.|+.|+||++-+ ++. +.++.+|..+|.+++|+++|..+.+++.|+.+++||+++|+++
T Consensus 216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~--lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~ 293 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRC--LRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVL 293 (503)
T ss_pred ccchhhhccceeeEEEecCCCceEEEEEEecCcce--ehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEE
Confidence 355666664 4689999999999999977 444 4578999999999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 591 HKLVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
..+.. ...++|+.| +.+.+++|+.|+.|+.||+++++ .++.+..|-+.|..+.|-++|+++++.++|++++||+
T Consensus 294 ~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k--vvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe 370 (503)
T KOG0282|consen 294 SRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK--VVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWE 370 (503)
T ss_pred EEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchH--HHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEE
Confidence 98863 446778888 34799999999999999999987 4577888999999999999999999999999999999
Q ss_pred CCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE---EE---cCCCCeEEEEEccCCCEE
Q psy10114 668 LHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ---CV---DTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 668 l~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~---~l---~~~s~V~sLafSpdg~~L 740 (819)
.+...+++... .+.....++..+|+++.+++- +.|+.|.++.+...-... .+ ...+.-+.+.|||||++|
T Consensus 371 ~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQ---s~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l 447 (503)
T KOG0282|consen 371 NRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQ---SMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTL 447 (503)
T ss_pred cCCCccchhhcchhhccCcceecCCCCCeehhh---ccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeE
Confidence 99887765543 234456789999999977764 389999999865432211 11 224557889999999999
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC-CCEEEEEeCCCcEEEEE
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD-GEAIVTGAGDETLRFWN 797 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD-G~~LaSGS~DGtIrIWd 797 (819)
++ |+.||.+.+||.++-+.+..+++|++.+..+.|+|. ...+|||+.||.|++|+
T Consensus 448 ~S--GdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 448 CS--GDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred Ee--ecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 99 999999999999999999999999999999999995 45789999999999996
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=252.39 Aligned_cols=277 Identities=19% Similarity=0.370 Sum_probs=239.5
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEc-CCCCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWN-ERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafS-pdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
+.+.++.+..+..+.++|.++.++.+ .+-+..+.|.+++|- |+.+++|++++.+.+++++..+..+. .+.||+..|
T Consensus 292 ~~~~~l~vtaeQnl~l~d~~~l~i~k--~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~v 368 (775)
T KOG0319|consen 292 SMSQLLLVTAEQNLFLYDEDELTIVK--QIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAV 368 (775)
T ss_pred ccCceEEEEccceEEEEEccccEEeh--hhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhhe
Confidence 45678889999999999998887655 566778999999985 57799999999999999998877665 788999999
Q ss_pred EEEE-e-CCceeeeccCCCeEEEEECCCCC--ccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCce--
Q psy10114 601 GALA-W-NGDMLSSGSRDRMILQRDVRTPN--SQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSP-- 673 (819)
Q Consensus 601 ~sLa-w-ng~~LaSGS~DGtI~IWDi~t~~--~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~-- 673 (819)
.+++ | +|..|++||.|.++++|.++.+. ...+....+|...|.+++++..+ ..|+++|.|+++++|++...+.
T Consensus 369 lSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~ 448 (775)
T KOG0319|consen 369 LSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETA 448 (775)
T ss_pred eeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccc
Confidence 9999 5 57799999999999999884433 23456678999999999997754 4889999999999999976321
Q ss_pred ---eE----EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEe
Q psy10114 674 ---LQ----TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 674 ---i~----t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsG 745 (819)
+. ....|...|++++.+|+.+ ++++|+ .|++.++|++...+....+ .|...+.++.|++..+.+++ +
T Consensus 449 ~~~~~~~~~t~~aHdKdIN~Vaia~ndk-LiAT~S--qDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT--~ 523 (775)
T KOG0319|consen 449 FPIVLTCRYTERAHDKDINCVAIAPNDK-LIATGS--QDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLAT--C 523 (775)
T ss_pred ccceehhhHHHHhhcccccceEecCCCc-eEEecc--cccceeeecccCceEEEEeeCCccceEEEEeccccceeEe--c
Confidence 11 2246899999999999987 777876 9999999999988888877 56788999999999999999 6
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+.|++|+||.+.++.+++++.||+..|..++|-.+|+.|++++.||-|++|++.++++...
T Consensus 524 SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~t 584 (775)
T KOG0319|consen 524 SGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMT 584 (775)
T ss_pred cCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhh
Confidence 6799999999999999999999999999999999999999999999999999999887654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=236.70 Aligned_cols=279 Identities=24% Similarity=0.418 Sum_probs=231.4
Q ss_pred CCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC---CEEEEEecCceEEEeecCCc
Q psy10114 511 QDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG---NLVAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 511 ~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG---~~LAsGs~DGtI~IWDl~tg 587 (819)
.+|-++.++.-.++.+++++.||.+++||.... .. ....+|.++|.+++|.... ..+++++.|.++++|..+.+
T Consensus 103 ~hdDWVSsv~~~~~~IltgsYDg~~riWd~~Gk-~~--~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGASKWILTGSYDGTSRIWDLKGK-SI--KTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhcccCceEEEeecCCeeEEEecCCc-eE--EEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 344467777777899999999999999997654 33 3567899999999986433 36999999999999998876
Q ss_pred eE----EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC-----------------------CccceEEEecc
Q psy10114 588 KQ----VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP-----------------------NSQSERRLVGH 638 (819)
Q Consensus 588 k~----i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~-----------------------~~~~v~~l~gH 638 (819)
+. +....||...|-+++. +|..+++||.|.++.+|+..+. ...++..+.||
T Consensus 180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GH 259 (423)
T KOG0313|consen 180 ENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGH 259 (423)
T ss_pred hhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccc
Confidence 43 3444599999999998 6889999999999999993321 12345678999
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 639 ~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
.+.|.++.|++ ...+.+++.|.+|+.||+.++..+.++.. .....+++.+|..+ ++++|+ .|..+++||.+++.-
T Consensus 260 t~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~-Ll~~gs--sdr~irl~DPR~~~g 334 (423)
T KOG0313|consen 260 TEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSK-LLASGS--SDRHIRLWDPRTGDG 334 (423)
T ss_pred ccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccc-eeeecC--CCCceeecCCCCCCC
Confidence 99999999997 67899999999999999999998888764 67789999999766 666665 899999999998642
Q ss_pred --e--EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc-EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcE
Q psy10114 719 --M--QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT-QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETL 793 (819)
Q Consensus 719 --v--~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k-~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtI 793 (819)
+ +-+.|.+-|.++.|+|...+.++. |+.|+++++||+++.+ ++..+.+|.+.|.++.|+ ++..|++|+.|.+|
T Consensus 335 s~v~~s~~gH~nwVssvkwsp~~~~~~~S-~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l 412 (423)
T KOG0313|consen 335 SVVSQSLIGHKNWVSSVKWSPTNEFQLVS-GSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKL 412 (423)
T ss_pred ceeEEeeecchhhhhheecCCCCceEEEE-EecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceE
Confidence 2 223677889999999988877764 8899999999999877 999999999999999997 56699999999999
Q ss_pred EEEECC
Q psy10114 794 RFWNVF 799 (819)
Q Consensus 794 rIWdl~ 799 (819)
+++.-.
T Consensus 413 ~i~~~~ 418 (423)
T KOG0313|consen 413 RIFKGS 418 (423)
T ss_pred EEeccc
Confidence 998643
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=239.14 Aligned_cols=275 Identities=16% Similarity=0.276 Sum_probs=242.4
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccC------CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSA------DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~------h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
+..++.+++++++++.||-|.+||..+|++.+-..++. +.++|.|++|+.|...+|+|+.||.|+||.+++|.+
T Consensus 218 cA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~C 297 (508)
T KOG0275|consen 218 CARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQC 297 (508)
T ss_pred heeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchH
Confidence 34456678899999999999999999998765333322 467999999999999999999999999999999999
Q ss_pred EEEEe-cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 590 VHKLV-GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 590 i~tl~-gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
++.+. .|+..|+|+.| ++..+++++.|.++++.-+.+++ ....+.||+.-|+...|++||..+++++.||+|++|
T Consensus 298 lRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK--~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW 375 (508)
T KOG0275|consen 298 LRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK--CLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVW 375 (508)
T ss_pred HHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch--hHHHhcCccccccceEEcCCCCeEEEecCCccEEEe
Confidence 99997 89999999999 57799999999999999999977 457889999999999999999999999999999999
Q ss_pred ECCCCceeEEEec--CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC----CCCeEEEEEccCCCEE
Q psy10114 667 NLHSMSPLQTYTE--HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT----GSQVCNLAWSKHSSEL 740 (819)
Q Consensus 667 Dl~t~~~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~----~s~V~sLafSpdg~~L 740 (819)
+.++.+++.+|+. ...+|.++-.-|.+..-++.+. ..+++.+-++. |+.++++.. ++...+.+.||.|..+
T Consensus 376 ~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN--rsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewi 452 (508)
T KOG0275|consen 376 HGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN--RSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWI 452 (508)
T ss_pred cCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc--CCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEE
Confidence 9999999999874 4568888888887765555554 67899999875 777777743 4567788899999999
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
++ .++|+.+..|.+.+|+.-.++..|...|..++-+|..+.|++-++||.+++|.
T Consensus 453 Yc--igED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 453 YC--IGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EE--EccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 99 56899999999999999999999999999999999999999999999999995
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=248.66 Aligned_cols=248 Identities=21% Similarity=0.362 Sum_probs=227.3
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~ 628 (819)
+..+++.|.++.++|....++++-.+|.|.|||.++...++.+.-...+|.+..| ..+.+++|++|..|++++..+.+
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~e 88 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGE 88 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccce
Confidence 4457899999999999999999999999999999999999999988999999999 57799999999999999999976
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
.+..+..|.+-|.+++.+|...+++++|+|-+|++||.+.+ .+.++|.+|..-|.+++|.|....-+++++ -|++
T Consensus 89 --kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~s--LDrT 164 (794)
T KOG0276|consen 89 --KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASAS--LDRT 164 (794)
T ss_pred --eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeee--cccc
Confidence 56899999999999999999999999999999999999754 688999999999999999999988899886 9999
Q ss_pred EEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEE
Q psy10114 708 IRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaS 786 (819)
|++|.+.+..+..+++ |...|+++.+-+.|..-+.++|.+|..|++||+.+.++++++.||...|..+.|+|.-..++|
T Consensus 165 VKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiis 244 (794)
T KOG0276|consen 165 VKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIIS 244 (794)
T ss_pred EEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEE
Confidence 9999999988888874 678899999998775444444999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEECCCCc
Q psy10114 787 GAGDETLRFWNVFSKV 802 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~ 802 (819)
|++||++|+|+-.+-+
T Consensus 245 gsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 245 GSEDGTVRIWNSKTYK 260 (794)
T ss_pred ecCCccEEEecCccee
Confidence 9999999999976643
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=249.18 Aligned_cols=276 Identities=18% Similarity=0.323 Sum_probs=238.4
Q ss_pred EEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec
Q psy10114 518 LVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 518 ~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
.++|+++ .++++-.+|.|.+||..-+.+. ..+..|.++|+.++|+|++.++++|+.|-.|+||+..+.+++.++.|
T Consensus 14 glsFHP~rPwILtslHsG~IQlWDYRM~tli--~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~G 91 (1202)
T KOG0292|consen 14 GLSFHPKRPWILTSLHSGVIQLWDYRMGTLI--DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLG 91 (1202)
T ss_pred ceecCCCCCEEEEeecCceeeeehhhhhhHH--hhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcc
Confidence 3455554 6899999999999999887654 46889999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCc--eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-
Q psy10114 596 HTARVGALAWNGD--MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS- 672 (819)
Q Consensus 596 Hs~~V~sLawng~--~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~- 672 (819)
|-.-|..+.|+.. .++|+|+|.+|+||+..+.+ .+..+.||..-|.|..|+|....++++|-|.+|+|||+...+
T Consensus 92 HlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~--~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRk 169 (1202)
T KOG0292|consen 92 HLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK--CIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRK 169 (1202)
T ss_pred ccceeEEeeccCCCceEEEccCCCeEEEEeccCCc--eEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhc
Confidence 9999999999654 79999999999999999876 568899999999999999999999999999999999984311
Q ss_pred ----------------------------eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee---EE
Q psy10114 673 ----------------------------PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM---QC 721 (819)
Q Consensus 673 ----------------------------~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v---~~ 721 (819)
..+.+.+|...|+-++|+|.-. ++++|+ .|+.|++|.+...+.- ..
T Consensus 170 k~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~--DDRqVKlWrmnetKaWEvDtc 246 (1202)
T KOG0292|consen 170 KNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGA--DDRQVKLWRMNETKAWEVDTC 246 (1202)
T ss_pred cCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eEEecC--CcceeeEEEeccccceeehhh
Confidence 1244678999999999999887 666765 8999999998754321 22
Q ss_pred EcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 722 VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 722 l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
..|.+.|.++.|+|..+.+++ .++|+.|++||+...+.+.+++...++.+.++.+|..+.++. +.|+-+.+|.++..
T Consensus 247 rgH~nnVssvlfhp~q~lIlS--nsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAA-gHDsGm~VFkleRE 323 (1202)
T KOG0292|consen 247 RGHYNNVSSVLFHPHQDLILS--NSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAA-GHDSGMIVFKLERE 323 (1202)
T ss_pred hcccCCcceEEecCccceeEe--cCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeee-ecCCceEEEEEccc
Confidence 357789999999999999998 789999999999999999999988899999999999987764 56777888888754
Q ss_pred ce
Q psy10114 802 VR 803 (819)
Q Consensus 802 ~~ 803 (819)
.+
T Consensus 324 rp 325 (1202)
T KOG0292|consen 324 RP 325 (1202)
T ss_pred Cc
Confidence 43
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=227.61 Aligned_cols=254 Identities=21% Similarity=0.371 Sum_probs=219.1
Q ss_pred EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec-CCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEE
Q psy10114 547 RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV-SVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 547 ~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl-~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWD 623 (819)
.+..+.+|++.|..+.|+|+|..||+|+.|..|.+|++ ...+-...+++|++.|..+.| +++.++++|.|++++.||
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence 34567899999999999999999999999999999995 455667788899999999999 788999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
+++++ ...+.++|..-|..+.-+.-| .++.+|+.|+++++||+++..+++++. .+..++++.|...+..++..|
T Consensus 119 ~~tG~--~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sgg-- 193 (338)
T KOG0265|consen 119 AETGK--RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGG-- 193 (338)
T ss_pred cccce--eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeecc--
Confidence 99987 458889999999998855444 367788999999999999999888875 467899999999988766543
Q ss_pred CCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC----CCcEEEEEecCCC----CEE
Q psy10114 703 TADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP----TLTQVAKLTGHSY----RVL 773 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~----s~k~l~sl~gH~~----~Vt 773 (819)
-|+.|++||++.++....+ .+...|+.+..+++|.++.+ .+.|+.+++||++ ...++..+.+|.. ...
T Consensus 194 -Idn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~lls--nsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL 270 (338)
T KOG0265|consen 194 -IDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLS--NSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLL 270 (338)
T ss_pred -ccCceeeeccccCcceEEeecccCceeeEEeccCCCcccc--ccccceEEEEEecccCCCCceEEEeecchhhhhhhcc
Confidence 8999999999999988877 46788999999999999999 7899999999986 3445777777643 356
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCceecccc
Q psy10114 774 YLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
.++|+|+++.+..|+.|..+++||..+.....+.+
T Consensus 271 ~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklp 305 (338)
T KOG0265|consen 271 KCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLP 305 (338)
T ss_pred eeeccCCCCccccccccceEEEeecccccEEEEcC
Confidence 78999999999999999999999999877666654
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=242.19 Aligned_cols=282 Identities=19% Similarity=0.310 Sum_probs=239.1
Q ss_pred CceeecCCCcCCcceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCce
Q psy10114 501 PFKVLDAPELQDDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGY 578 (819)
Q Consensus 501 P~kvLdap~l~dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGt 578 (819)
...++++|+ .-++.+.|-. +.++++|.|..|++|+...++......+.+..+.|+++.|.++++++++++.|+.
T Consensus 167 ~~~~ld~h~----gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~ 242 (459)
T KOG0288|consen 167 ALFVLDAHE----GEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKN 242 (459)
T ss_pred hhhhhhccc----cccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCc
Confidence 344555554 3356667764 5799999999999999988886666778888899999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEE
Q psy10114 579 VQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLAS 656 (819)
Q Consensus 579 I~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaS 656 (819)
+++|++.+.+...++.||++.|+++.| ....+++|+.|.+|+.||+....+. .+.. -...+.++..+ +..+++
T Consensus 243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~--kt~l-~~S~cnDI~~~--~~~~~S 317 (459)
T KOG0288|consen 243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCS--KTVL-PGSQCNDIVCS--ISDVIS 317 (459)
T ss_pred eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhhee--cccc-ccccccceEec--ceeeee
Confidence 999999999999999999999999999 3345999999999999999885542 2211 12334455544 567899
Q ss_pred EECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-----cCCCCeEEE
Q psy10114 657 GGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-----DTGSQVCNL 731 (819)
Q Consensus 657 GS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-----~~~s~V~sL 731 (819)
|..|++|++||.++..+......+. .|+++..+++|..+++++ .|.++.+.|+++.+....+ ...+..+.+
T Consensus 318 gH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsss---RDdtl~viDlRt~eI~~~~sA~g~k~asDwtrv 393 (459)
T KOG0288|consen 318 GHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSS---RDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRV 393 (459)
T ss_pred cccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeec---CCCceeeeecccccEEEEeecccccccccccee
Confidence 9999999999999999998887654 999999999999998874 7999999999999887776 345678999
Q ss_pred EEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC--CEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY--RVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 732 afSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~--~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
+|||++.++++ |+.||.|+||++.+++....+..... .|++++|+|.|..+++++.++.+++|.
T Consensus 394 vfSpd~~YvaA--GS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 394 VFSPDGSYVAA--GSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EECCCCceeee--ccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 99999999999 99999999999999999888876544 499999999999999999999999993
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-24 Score=217.76 Aligned_cols=245 Identities=26% Similarity=0.427 Sum_probs=209.3
Q ss_pred eEEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCc---eEEEEE-ecCCCCeEEEEe--CCceeeeccCCC
Q psy10114 545 VTRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVA---KQVHKL-VGHTARVGALAW--NGDMLSSGSRDR 617 (819)
Q Consensus 545 ~~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tg---k~i~tl-~gHs~~V~sLaw--ng~~LaSGS~DG 617 (819)
+..+..+++|.+.+..++|+|- |..||+|+.|..|+||+...+ .+...+ .+|+..|.+++| .|++|++||.|.
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 3445678899999999999998 889999999999999998853 344444 379999999999 688999999999
Q ss_pred eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC---ceeEEEecCCCCEEEEEEcCCCC
Q psy10114 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM---SPLQTYTEHLAAVKAIAWSPHHH 694 (819)
Q Consensus 618 tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~---~~i~t~~~h~~~VtsLafSPdg~ 694 (819)
++.||.-..++...+..+.||..+|.+++|+++|++||+++.|..|-||.+..+ ++...+++|...|+.+.|+|...
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence 999999988888888999999999999999999999999999999999999744 46778899999999999999877
Q ss_pred eEEEEEccCCCCeEEEEECCC---CceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC
Q psy10114 695 GLLASGGGTADRCIRFWNTLT---GQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY 770 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~t---g~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~ 770 (819)
++++++ .|++|++|+-.. -+++++++ +.+.|.+++|++.|..+++ ++.|+.++||...+.-. ..|..
T Consensus 164 -lL~S~S--YDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s--~sdD~tv~Iw~~~~~~~----~~~sr 234 (312)
T KOG0645|consen 164 -LLFSCS--YDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVS--CSDDGTVSIWRLYTDLS----GMHSR 234 (312)
T ss_pred -eeEEec--cCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEE--ecCCcceEeeeeccCcc----hhccc
Confidence 666665 999999998763 24667774 4568999999999999999 78999999998652211 13678
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 771 RVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 771 ~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
.+..++|. ...|+|+++|+.|+++.-..
T Consensus 235 ~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~ 262 (312)
T KOG0645|consen 235 ALYDVPWD--NGVIASGGGDDAIRLFKESD 262 (312)
T ss_pred ceEeeeec--ccceEeccCCCEEEEEEecC
Confidence 89999997 45899999999999998764
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=253.35 Aligned_cols=244 Identities=21% Similarity=0.402 Sum_probs=201.4
Q ss_pred ecc-CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC--------------------------------c---------
Q psy10114 550 DLS-ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV--------------------------------A--------- 587 (819)
Q Consensus 550 ~l~-~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t--------------------------------g--------- 587 (819)
.+. .|.+.|.++.||+||++||+|+.||.|+||.+.. .
T Consensus 261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~ 340 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR 340 (712)
T ss_pred ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence 445 7999999999999999999999999999998754 0
Q ss_pred -------------------eEEEEEecCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEE
Q psy10114 588 -------------------KQVHKLVGHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKW 647 (819)
Q Consensus 588 -------------------k~i~tl~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLaf 647 (819)
++++.+.||.+.|.+++|+ .++|+++|.|++|++|++...++ .....|.+-|+|++|
T Consensus 341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~C---L~~F~HndfVTcVaF 417 (712)
T KOG0283|consen 341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKEC---LKVFSHNDFVTCVAF 417 (712)
T ss_pred cccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcce---eeEEecCCeeEEEEe
Confidence 1133567899999999995 67999999999999999987664 345569999999999
Q ss_pred CC-CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---
Q psy10114 648 SP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--- 723 (819)
Q Consensus 648 Sp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--- 723 (819)
+| |++++++|+-||+|+||++...+.+. ...-..-|++++|.|+|++.++ |+.+|.+++|++...+.+....
T Consensus 418 nPvDDryFiSGSLD~KvRiWsI~d~~Vv~-W~Dl~~lITAvcy~PdGk~avI---Gt~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRLWSISDKKVVD-WNDLRDLITAVCYSPDGKGAVI---GTFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred cccCCCcEeecccccceEEeecCcCeeEe-ehhhhhhheeEEeccCCceEEE---EEeccEEEEEEccCCeEEEeeeEee
Confidence 99 88999999999999999998766544 4445588999999999997666 4599999999999877665442
Q ss_pred ------CCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEEecCCC--CEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 724 ------TGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY--RVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 724 ------~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl~gH~~--~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
.+..|+.+.|.|... .+++ .+.|.+|+|+|.++.+.+..++|+.. .-...+|+.||++|++|++|..|+
T Consensus 494 ~~~Kk~~~~rITG~Q~~p~~~~~vLV--TSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VY 571 (712)
T KOG0283|consen 494 HNKKKKQGKRITGLQFFPGDPDEVLV--TSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVY 571 (712)
T ss_pred ccCccccCceeeeeEecCCCCCeEEE--ecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEE
Confidence 123699999997554 3555 45799999999998888888887532 345678999999999999999999
Q ss_pred EEECCCCc
Q psy10114 795 FWNVFSKV 802 (819)
Q Consensus 795 IWdl~s~~ 802 (819)
+|+.....
T Consensus 572 iW~~~~~~ 579 (712)
T KOG0283|consen 572 IWKNDSFN 579 (712)
T ss_pred EEeCCCCc
Confidence 99986544
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=237.25 Aligned_cols=279 Identities=24% Similarity=0.365 Sum_probs=232.8
Q ss_pred eEEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+.++++++. +=+++..+-.|.|++..+.+..+ .+....+.|.++.|-.||+++|+|+..|.|+|+|..+...++.
T Consensus 28 ~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k--~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~ 105 (487)
T KOG0310|consen 28 SVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRK--TFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQ 105 (487)
T ss_pred cceeEecCCCCCCceEEecccEEEEEecchhhhhh--hHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHH
Confidence 4666777763 23344556779999988776554 3444568899999999999999999999999999777777889
Q ss_pred EecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEEC
Q psy10114 593 LVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNL 668 (819)
Q Consensus 593 l~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl 668 (819)
+.+|+.+|..+.| ++..+++|++|+.+++||+.+... ...+.+|++-|.|.+|+|.. ..+++||.||+|++||+
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v--~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~Dt 183 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV--QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDT 183 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE--EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEe
Confidence 9999999999999 466899999999999999998762 56889999999999999954 47899999999999999
Q ss_pred CCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-eEEE-cCCCCeEEEEEccCCCEEEEEEe
Q psy10114 669 HSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-MQCV-DTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 669 ~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-v~~l-~~~s~V~sLafSpdg~~LastsG 745 (819)
+.. ..+.++ .|..+|..+.+-|.|..++.+| ...|++||+.+|.. +... .|...|+|+++..++..|++ |
T Consensus 184 R~~~~~v~el-nhg~pVe~vl~lpsgs~iasAg----Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS--~ 256 (487)
T KOG0310|consen 184 RSLTSRVVEL-NHGCPVESVLALPSGSLIASAG----GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLS--G 256 (487)
T ss_pred ccCCceeEEe-cCCCceeeEEEcCCCCEEEEcC----CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEee--c
Confidence 987 556666 4999999999999998666554 47899999996544 4444 47888999999999999999 8
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+-|+.|++||+.+.+.+..+. -.++|.+++.+||++.++.|..||.+.+=+...+++..
T Consensus 257 sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k~k~s 315 (487)
T KOG0310|consen 257 SLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVKKKPS 315 (487)
T ss_pred ccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehhhcccCCC
Confidence 899999999999999888886 67899999999999999999999998877555544433
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=222.70 Aligned_cols=262 Identities=23% Similarity=0.402 Sum_probs=219.7
Q ss_pred CCCeEEEEEcC-CCceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecC-CceEEEEEecCCCCeEEEEeC-
Q psy10114 531 LGSCVYLWSAC-TSQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVS-VAKQVHKLVGHTARVGALAWN- 606 (819)
Q Consensus 531 ~Dg~V~LWd~~-tg~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~-tgk~i~tl~gHs~~V~sLawn- 606 (819)
.+|.+.|-+.. .+.+...+.+. -++.+..++|+++. +.+++++.||++++||.. ..++++.++.|...|.++.|+
T Consensus 36 G~G~L~ile~~~~~gi~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~ 114 (311)
T KOG0277|consen 36 GNGRLFILEVTDPKGIQECQSYD-TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNT 114 (311)
T ss_pred cCceEEEEecCCCCCeEEEEeee-cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEecccc
Confidence 45789999986 44444444443 36889999999864 788999999999999964 346889999999999999994
Q ss_pred --CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEEEecCCCC
Q psy10114 607 --GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA 683 (819)
Q Consensus 607 --g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~ 683 (819)
+..++++|.|++|++||...++ .+.++.+|...|...+|+| ..+.+++++.|+++++||++.......+..|...
T Consensus 115 ~~r~~~ltsSWD~TiKLW~~~r~~--Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~E 192 (311)
T KOG0277|consen 115 VRRRIFLTSSWDGTIKLWDPNRPN--SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSE 192 (311)
T ss_pred ccceeEEeeccCCceEeecCCCCc--ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccce
Confidence 6678888999999999998765 5688999999999999999 6789999999999999999875555558899999
Q ss_pred EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC-c
Q psy10114 684 VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG-QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL-T 760 (819)
Q Consensus 684 VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~-k 760 (819)
+.+..|+.-...++++|+ .|+.|+.||+++- .++..+ .++-.|..++|||...-+++. ++.|-+++|||.... .
T Consensus 193 il~cdw~ky~~~vl~Tg~--vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaS-asYDmT~riw~~~~~ds 269 (311)
T KOG0277|consen 193 ILCCDWSKYNHNVLATGG--VDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLAS-ASYDMTVRIWDPERQDS 269 (311)
T ss_pred eEeecccccCCcEEEecC--CCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhh-ccccceEEecccccchh
Confidence 999999999999999987 9999999999974 345555 456679999999987766654 678999999998744 3
Q ss_pred EEEEEecCCCCEEEEEEec-CCCEEEEEeCCCcEEEEEC
Q psy10114 761 QVAKLTGHSYRVLYLAMSP-DGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 761 ~l~sl~gH~~~VtsLafSp-DG~~LaSGS~DGtIrIWdl 798 (819)
.+.+...|+.-|..+.||+ ++.++|+++.|+.++||+-
T Consensus 270 ~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 270 AIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 4455667888999999998 6779999999999999984
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-24 Score=217.65 Aligned_cols=273 Identities=15% Similarity=0.253 Sum_probs=228.7
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG 601 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~ 601 (819)
.|+.+++++.|....+|-..+|+. +-++.+|.+.|.|+..+-+.+++++|+.|.++++||+++|+++.+++. ...|.
T Consensus 21 eGDLlFscaKD~~~~vw~s~nGer--lGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~-~~~Vk 97 (327)
T KOG0643|consen 21 EGDLLFSCAKDSTPTVWYSLNGER--LGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKT-NSPVK 97 (327)
T ss_pred CCcEEEEecCCCCceEEEecCCce--eeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeec-CCeeE
Confidence 478999999999999999888864 557899999999999999999999999999999999999999999874 56788
Q ss_pred EEEe--CCceeeecc-----CCCeEEEEECCCCC-----ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 602 ALAW--NGDMLSSGS-----RDRMILQRDVRTPN-----SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 602 sLaw--ng~~LaSGS-----~DGtI~IWDi~t~~-----~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+.| +|++++... ..+.|.++|++... ..+..++..+.+.++.+-|.|-++.|++|.+||.|.+||++
T Consensus 98 ~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~ 177 (327)
T KOG0643|consen 98 RVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDAR 177 (327)
T ss_pred EEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcc
Confidence 8888 466655543 34789999998433 23456777788999999999999999999999999999999
Q ss_pred CCc-eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 670 SMS-PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 670 t~~-~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssD 748 (819)
+++ .+...+.|...|+.++++++..++++ ++ .|.+-++||.++-+.++++.+..++++.+++|..+.++..+|-+.
T Consensus 178 ~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT-~s--~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA 254 (327)
T KOG0643|consen 178 TGKELVDSDEEHSSKINDLQFSRDRTYFIT-GS--KDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEA 254 (327)
T ss_pred cCceeeechhhhccccccccccCCcceEEe-cc--cCccceeeeccceeeEEEeeecccccceecccccceEEecCCcee
Confidence 974 55666789999999999999986665 33 899999999999999999999999999999999998888433222
Q ss_pred CeEEEEECCC------------CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 749 NQILVWKYPT------------LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 749 g~I~IWDl~s------------~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
..|.-=+.+. .+.+..+++|-++|++++|+|||+..++|++||.||+...+.
T Consensus 255 ~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 255 MDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred eeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 2232222222 345677889999999999999999999999999999986653
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=244.55 Aligned_cols=251 Identities=23% Similarity=0.429 Sum_probs=216.3
Q ss_pred EEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCC-ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEE
Q psy10114 548 LCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSV-AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~t-gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWD 623 (819)
+..+.+|...|+++.|.| .+.+|++|+.|+.|+||++-. +++++++.+|..+|.+++| +|..++++|.|+.+++||
T Consensus 207 ~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD 286 (503)
T KOG0282|consen 207 SHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD 286 (503)
T ss_pred eeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence 456789999999999999 899999999999999999876 8999999999999999999 477999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
.++++.. ..+. ....+.|+.|+||+ +.+++|+.|+.|+.||+++++.++.+..|-++|..+.|-++|+.++.+.
T Consensus 287 tETG~~~--~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissS-- 361 (503)
T KOG0282|consen 287 TETGQVL--SRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSS-- 361 (503)
T ss_pred cccceEE--EEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeec--
Confidence 9998743 2222 23567899999998 8899999999999999999999999999999999999999999888875
Q ss_pred CCCCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC---CcEEEEEecCC--CCEEEE
Q psy10114 703 TADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT---LTQVAKLTGHS--YRVLYL 775 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s---~k~l~sl~gH~--~~VtsL 775 (819)
.|+++++|+.+.+..++.+. ......++..+|+++.+++ -+.|+.|.++.... ......++||. +.-..+
T Consensus 362 -Ddks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a--Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v 438 (503)
T KOG0282|consen 362 -DDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA--QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQV 438 (503)
T ss_pred -cCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh--hccCceEEEEecccccccCHhhhhcceeccCceeeE
Confidence 79999999999887776553 2345678999999999999 78899999998753 23334567774 456789
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 776 AMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 776 afSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.|||||.+|++|+.||.+.+||..+-+...+
T Consensus 439 ~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~ 469 (503)
T KOG0282|consen 439 DFSPDGRTLCSGDSDGKVNFWDWKTTKLVSK 469 (503)
T ss_pred EEcCCCCeEEeecCCccEEEeechhhhhhhc
Confidence 9999999999999999999999987665443
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=246.84 Aligned_cols=249 Identities=20% Similarity=0.387 Sum_probs=219.8
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCC
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~ 628 (819)
++..+..|..++|+|...++.++-.+|.|++||.+-+.++..+..|.++|..++|+ +.+++||++|-.|++|+..+.+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr 84 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR 84 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce
Confidence 45557889999999999999999999999999999999999999999999999994 6699999999999999999866
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeE
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCI 708 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtI 708 (819)
...++.||-+-|..+.|++.-..++++|+|.+|+||+.++++++..+++|..-|.|.+|+|... ++++++ -|.+|
T Consensus 85 --clftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptED-lIVSaS--LDQTV 159 (1202)
T KOG0292|consen 85 --CLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTED-LIVSAS--LDQTV 159 (1202)
T ss_pred --ehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccc-eEEEec--ccceE
Confidence 5688999999999999999999999999999999999999999999999999999999999877 556655 99999
Q ss_pred EEEECCCCc---------------------------e-eEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 709 RFWNTLTGQ---------------------------P-MQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 709 rIWDl~tg~---------------------------~-v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
|+||+..-+ . ++.+ .|+..|+-++|+|.-..+++ |++|.+|++|.+..
T Consensus 160 RVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVS--G~DDRqVKlWrmne 237 (1202)
T KOG0292|consen 160 RVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVS--GADDRQVKLWRMNE 237 (1202)
T ss_pred EEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEe--cCCcceeeEEEecc
Confidence 999985311 0 1111 35677899999999999988 99999999999874
Q ss_pred Cc--EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 759 LT--QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 759 ~k--~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
-+ .+-+.+||...|.++-|+|..+.|+|.|+|++||+||+...+..+.
T Consensus 238 tKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~t 287 (1202)
T KOG0292|consen 238 TKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQT 287 (1202)
T ss_pred ccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceee
Confidence 43 3556789999999999999999999999999999999988766543
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-23 Score=218.63 Aligned_cols=266 Identities=22% Similarity=0.327 Sum_probs=223.5
Q ss_pred EEEEECCCeEEEEEcCC----------CceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec
Q psy10114 526 VLSVGLGSCVYLWSACT----------SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~t----------g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
+++|+....|.-+++.- ..+..++.+..|.+++++++.+ |.++|+|+.|-+|+|||+.+.+++..+-.
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~ 81 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLS 81 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceec
Confidence 56666666666665432 2234467778999999999986 89999999999999999999999999999
Q ss_pred CCCCeEEEEeCC----ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 596 HTARVGALAWNG----DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 596 Hs~~V~sLawng----~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
|.+.|+++.|.+ +.|++|+.||.|.+|+...- ..+..+++|.+.|+.++.+|.+++.++.+.|+.++.||+-.|
T Consensus 82 HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W--~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~G 159 (362)
T KOG0294|consen 82 HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW--ELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRG 159 (362)
T ss_pred cccceEEEEecCCcchhheeeecCCCcEEEEEcCCe--EEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcC
Confidence 999999999943 37999999999999999774 567899999999999999999999999999999999999888
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I 751 (819)
+.-....-. ..-+.+.|+|.|.++++.+ ...|-+|.+.+......+.....+.++.|- ++..+++ |.+|+.|
T Consensus 160 r~a~v~~L~-~~at~v~w~~~Gd~F~v~~----~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~v--G~d~~~i 231 (362)
T KOG0294|consen 160 RVAFVLNLK-NKATLVSWSPQGDHFVVSG----RNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLV--GGDNEWI 231 (362)
T ss_pred ccceeeccC-CcceeeEEcCCCCEEEEEe----ccEEEEEecccHhHhhhhhccccceeeeec-CCceEEE--ecCCceE
Confidence 765544422 2224499999999888765 578999999988877777666677777774 5566777 8899999
Q ss_pred EEEECCCCcEEEEEecCCCCEEEEEE--ecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 752 LVWKYPTLTQVAKLTGHSYRVLYLAM--SPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~gH~~~VtsLaf--SpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
.+||..+..+...+.+|..+|-++.+ .|++.+|+|+|.||.|++||++...+
T Consensus 232 ~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k 285 (362)
T KOG0294|consen 232 SLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETK 285 (362)
T ss_pred EEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccccc
Confidence 99999999999999999999999985 45788999999999999999987643
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-23 Score=236.73 Aligned_cols=282 Identities=23% Similarity=0.383 Sum_probs=216.2
Q ss_pred eEEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
-+.++.-+++ .++.|-.||.|+||+..++. ..+.+.+|...|+++.|+..|..||+|+.|+.|.+||+-...-...
T Consensus 67 evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~--~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~r 144 (888)
T KOG0306|consen 67 EVTCLRSSDDILLLAVGYADGSVQIFSLESEE--ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFR 144 (888)
T ss_pred eEEEeeccCCcceEEEEecCceEEeeccCCCc--eeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEE
Confidence 4555555544 35777789999999998774 4568899999999999999999999999999999998865544445
Q ss_pred EecCCCCeE------------------------------------------EEEeCCceeeeccCCCeEEEEECCCC---
Q psy10114 593 LVGHTARVG------------------------------------------ALAWNGDMLSSGSRDRMILQRDVRTP--- 627 (819)
Q Consensus 593 l~gHs~~V~------------------------------------------sLawng~~LaSGS~DGtI~IWDi~t~--- 627 (819)
+.||...|+ +++++++.+++++.|+.+++|++...
T Consensus 145 L~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~ 224 (888)
T KOG0306|consen 145 LRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDE 224 (888)
T ss_pred eecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeeccccc
Confidence 555554444 44444444555555555555544100
Q ss_pred --------------------------------------------------------------------------------
Q psy10114 628 -------------------------------------------------------------------------------- 627 (819)
Q Consensus 628 -------------------------------------------------------------------------------- 627 (819)
T Consensus 225 ~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~ 304 (888)
T KOG0306|consen 225 KETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVE 304 (888)
T ss_pred ccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchh
Confidence
Q ss_pred ------------------------------C-----------------c----------cceEEEecccCCeEEEEECCC
Q psy10114 628 ------------------------------N-----------------S----------QSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 628 ------------------------------~-----------------~----------~~v~~l~gH~~~VtsLafSpd 650 (819)
. . .....+.+|...|.++++|.+
T Consensus 305 ~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d 384 (888)
T KOG0306|consen 305 KSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSD 384 (888)
T ss_pred hhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecC
Confidence 0 0 000234568888999999988
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEE----------------------------------------ecCCCCEEEEEEc
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSPLQTY----------------------------------------TEHLAAVKAIAWS 690 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~i~t~----------------------------------------~~h~~~VtsLafS 690 (819)
...+++|+. +.+++|+..+.++++++ ++|.++|.+++.+
T Consensus 385 ~~~~~Sga~-~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~ 463 (888)
T KOG0306|consen 385 SILLASGAG-ESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLS 463 (888)
T ss_pred ceeeeecCC-CcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeec
Confidence 877777665 58999998877665443 3588999999999
Q ss_pred CCCCeEEEEEccCCCCeEEEEECCC-----Cc--e------eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 691 PHHHGLLASGGGTADRCIRFWNTLT-----GQ--P------MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 691 Pdg~~LLaSGgGs~DgtIrIWDl~t-----g~--~------v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
||++.+++.+ .|.+|++||..- |. . .+.++....|.++.+||||+++++ +--|+++++|-+.
T Consensus 464 pD~~g~vT~s---aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV--sLLdnTVkVyflD 538 (888)
T KOG0306|consen 464 PDNKGFVTGS---ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV--SLLDNTVKVYFLD 538 (888)
T ss_pred CCCCceEEec---CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEE--EeccCeEEEEEec
Confidence 9999877644 799999999742 11 1 134456788999999999999999 8899999999999
Q ss_pred CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 758 TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 758 s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
+.+-.-++.||.-+|.|+..|||++.++|||.|.+|++|-++=|.+-
T Consensus 539 tlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCH 585 (888)
T KOG0306|consen 539 TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCH 585 (888)
T ss_pred ceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhh
Confidence 99999999999999999999999999999999999999999877654
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=226.44 Aligned_cols=276 Identities=19% Similarity=0.302 Sum_probs=238.1
Q ss_pred EEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+.+++..+ +.+++||.|..+.++|...++... .+.+|...|+++.++++...+++++.|-.|+||...........
T Consensus 222 i~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~--~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~ 299 (506)
T KOG0289|consen 222 ITALDIIPSSSKILTGGEDKTAVLFDKPSNQILA--TLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSS 299 (506)
T ss_pred eeEEeecCCCCcceecCCCCceEEEecchhhhhh--hccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccc
Confidence 44555554 789999999999999999887754 68899999999999999999999999999999999888888888
Q ss_pred ecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 594 VGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 594 ~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
..|.++|+.+.. +|++|++++.||...+.|++++....+..-....-.+++.+|+|||..|.+|+.||.|+|||+.++
T Consensus 300 ~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~ 379 (506)
T KOG0289|consen 300 RPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQ 379 (506)
T ss_pred ccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCc
Confidence 999999999988 699999999999999999999875433332223346899999999999999999999999999999
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC--CCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--GSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--~s~V~sLafSpdg~~LastsGssDg 749 (819)
..+..|.+|.++|++++|+.+|-++++.+ .|+.|++||++.-+...++.. ...+.++.|...|.++++ ++++=
T Consensus 380 ~~~a~Fpght~~vk~i~FsENGY~Lat~a---dd~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~--~g~~l 454 (506)
T KOG0289|consen 380 TNVAKFPGHTGPVKAISFSENGYWLATAA---DDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGI--AGSDL 454 (506)
T ss_pred cccccCCCCCCceeEEEeccCceEEEEEe---cCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEe--eccee
Confidence 99999999999999999999998776655 799999999999888777754 346999999999999999 55555
Q ss_pred eEEEEECC--CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 750 QILVWKYP--TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 750 ~I~IWDl~--s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
+|.+++-. +..++..+..|.+..+++.|....+++++++.|..++++.+
T Consensus 455 ~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 455 QVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 56555532 67778888889999999999999999999999999998764
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=224.93 Aligned_cols=241 Identities=26% Similarity=0.429 Sum_probs=208.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe---C--CceeeeccCCCeEEEEECCCC
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW---N--GDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw---n--g~~LaSGS~DGtI~IWDi~t~ 627 (819)
.|.+.|.++... +++|++|+.||.+++||. .|+.+.++.||.++|.+++| + ...++++|.|.++++|.++.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 367888888777 789999999999999995 68999999999999999999 2 236999999999999999877
Q ss_pred Cccc--eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC-------------------------CCceeEEEecC
Q psy10114 628 NSQS--ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH-------------------------SMSPLQTYTEH 680 (819)
Q Consensus 628 ~~~~--v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~-------------------------t~~~i~t~~~h 680 (819)
+... .....||...|.+++..++|..+++|+.|.+|.||+.. ++.++..+.+|
T Consensus 180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GH 259 (423)
T KOG0313|consen 180 ENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGH 259 (423)
T ss_pred hhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccc
Confidence 6432 23345999999999999999999999999999999931 12357778899
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k 760 (819)
.++|.++.|++.+ .+.+++ .|.+|+.||+.++.....+.++..+.++..+|..+.+++ |+.|..+++||-+++.
T Consensus 260 t~~Vs~V~w~d~~--v~yS~S--wDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~--gssdr~irl~DPR~~~ 333 (423)
T KOG0313|consen 260 TEPVSSVVWSDAT--VIYSVS--WDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLAS--GSSDRHIRLWDPRTGD 333 (423)
T ss_pred ccceeeEEEcCCC--ceEeec--ccceEEEEEeecccceeeeecCcceeEeecccccceeee--cCCCCceeecCCCCCC
Confidence 9999999999943 455655 999999999999999999999999999999999999998 8999999999988543
Q ss_pred ---EEEEEecCCCCEEEEEEecCC-CEEEEEeCCCcEEEEECCCCc
Q psy10114 761 ---QVAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 761 ---~l~sl~gH~~~VtsLafSpDG-~~LaSGS~DGtIrIWdl~s~~ 802 (819)
...++.+|...|.++.|+|.. ..|++|+.|+++++||+.+.+
T Consensus 334 gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 334 GSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred CceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 346788999999999999965 567899999999999998766
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-22 Score=232.43 Aligned_cols=245 Identities=17% Similarity=0.276 Sum_probs=190.0
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceEE-------------EEEecCCCCeEEEEeC---CceeeeccCCCeEE
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV-------------HKLVGHTARVGALAWN---GDMLSSGSRDRMIL 620 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i-------------~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~ 620 (819)
.|.....++++..+++++.+.....|+...+..+ ..+.+|.+.|.+++|+ ++.|++|+.||+|+
T Consensus 22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk 101 (493)
T PTZ00421 22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM 101 (493)
T ss_pred ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 3444555556555666666666666664433221 2467899999999995 46899999999999
Q ss_pred EEECCCCCc-----cceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCC
Q psy10114 621 QRDVRTPNS-----QSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694 (819)
Q Consensus 621 IWDi~t~~~-----~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~ 694 (819)
+||+..... ..+..+.+|...|.+++|+|++ +.|++|+.|++|++||+++++.+..+.+|...|.+++|+|+|.
T Consensus 102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~ 181 (493)
T PTZ00421 102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGS 181 (493)
T ss_pred EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCC
Confidence 999976431 2456788999999999999975 6999999999999999999999999999999999999999998
Q ss_pred eEEEEEccCCCCeEEEEECCCCceeEEEcC-C-CCeEEEEEccCCCEEEEEEe--cCCCeEEEEECCCCcE-EEEEecC-
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDT-G-SQVCNLAWSKHSSELVSTHG--YSQNQILVWKYPTLTQ-VAKLTGH- 768 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~-s~V~sLafSpdg~~LastsG--ssDg~I~IWDl~s~k~-l~sl~gH- 768 (819)
.++ +++ .|++|++||+++++.+..+.. . .....+.|.+++..+++++. ..|+.|++||+++... +.....+
T Consensus 182 lLa-tgs--~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~ 258 (493)
T PTZ00421 182 LLC-TTS--KDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ 258 (493)
T ss_pred EEE-Eec--CCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC
Confidence 554 444 899999999999998877743 2 23567889999888887532 3589999999987653 3333333
Q ss_pred CCCEEEEEEecCCCEEEEEe-CCCcEEEEECCCCcee
Q psy10114 769 SYRVLYLAMSPDGEAIVTGA-GDETLRFWNVFSKVRS 804 (819)
Q Consensus 769 ~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl~s~~~~ 804 (819)
...+....|++|+++|++|+ +||.|++||+.+++..
T Consensus 259 ~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 259 SSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLT 295 (493)
T ss_pred CCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceE
Confidence 34566678999999999887 5999999999887643
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-23 Score=219.36 Aligned_cols=249 Identities=21% Similarity=0.345 Sum_probs=209.2
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t 626 (819)
..+..|.++|.+++.+|+.+++|+|+.|..-.+|++.++.....+.+|+..|+++.| +|.+|++|+.+|.|++|+..+
T Consensus 58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st 137 (399)
T KOG0296|consen 58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST 137 (399)
T ss_pred eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence 367789999999999999999999999999999999999999999999999999999 688999999999999999998
Q ss_pred CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
+..+ ..+...-..+.-+.|+|.+..|+.|+.||.+.+|.+.++...+.+.+|..++++-.|.|+|+.++.. ..||
T Consensus 138 g~~~--~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tg---y~dg 212 (399)
T KOG0296|consen 138 GGEQ--WKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTG---YDDG 212 (399)
T ss_pred CceE--EEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEE---ecCc
Confidence 7643 4454566788889999999999999999999999999988899999999999999999999977663 3799
Q ss_pred eEEEEECCCCceeEEEcCC-----------------------CC-----------------------------eEEE---
Q psy10114 707 CIRFWNTLTGQPMQCVDTG-----------------------SQ-----------------------------VCNL--- 731 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~~~-----------------------s~-----------------------------V~sL--- 731 (819)
+|++||..+++++..+... .+ +.++
T Consensus 213 ti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~ 292 (399)
T KOG0296|consen 213 TIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESI 292 (399)
T ss_pred eEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhc
Confidence 9999999999887665310 00 0011
Q ss_pred EEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 732 afSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.++..-...+ .|+-||+|.|||+...+..... .|...|+.+.|-+ ..+|++++.||.|+.||..+++....
T Consensus 293 ~~ss~lpL~A--~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~ 363 (399)
T KOG0296|consen 293 PSSSKLPLAA--CGSVDGTIAIYDLAASTLRHIC-EHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFT 363 (399)
T ss_pred ccccccchhh--cccccceEEEEecccchhheec-cCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEE
Confidence 1111112222 3889999999999877766555 4888899999988 67999999999999999999987644
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-22 Score=207.94 Aligned_cols=273 Identities=19% Similarity=0.283 Sum_probs=226.2
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec--CceEEEeecCCceEE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH--HGYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~--DGtI~IWDl~tgk~i 590 (819)
.+++++++ |+.+++++.|..++|||..+++..+ .+..+.-.|..++|....+.++.++. |.+|+.-++.+++.+
T Consensus 16 ~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~--ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkyl 93 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVK--TINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYL 93 (311)
T ss_pred ceeEEEecCCCCEEEEecCCCeEEEEEcCCCceee--EeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceE
Confidence 46777877 5678888999999999999998766 44455667888999887777777766 889999999999999
Q ss_pred EEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 591 HKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 591 ~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
+.+.||...|.+++.+ ++.+++++.|++|++||++..+++....+. .-...+|.|+|-.+|++...+.|++||+
T Consensus 94 RYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~----~~pi~AfDp~GLifA~~~~~~~IkLyD~ 169 (311)
T KOG1446|consen 94 RYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS----GRPIAAFDPEGLIFALANGSELIKLYDL 169 (311)
T ss_pred EEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC----CCcceeECCCCcEEEEecCCCeEEEEEe
Confidence 9999999999999995 689999999999999999987765333322 2335689999999999998889999999
Q ss_pred CCC--ceeEEEe---cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC----CeEEEEEccCCCE
Q psy10114 669 HSM--SPLQTYT---EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS----QVCNLAWSKHSSE 739 (819)
Q Consensus 669 ~t~--~~i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s----~V~sLafSpdg~~ 739 (819)
+.- .|..++. +.....+.+.|+|+|+.++.+. ..+.+.+.|.-+|....++.... --...+|+||+++
T Consensus 170 Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT---~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~F 246 (311)
T KOG1446|consen 170 RSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST---NASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKF 246 (311)
T ss_pred cccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe---CCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcE
Confidence 864 4555554 3467889999999999999875 68999999999999887774321 2357899999999
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 740 LVSTHGYSQNQILVWKYPTLTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
+++ |+.||+|.+|+++++.++..+++ +.+++.++.|+|.-..++++ +..+-+|=...
T Consensus 247 vl~--gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~~ 304 (311)
T KOG1446|consen 247 VLS--GSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPDE 304 (311)
T ss_pred EEE--ecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEeccc
Confidence 999 88999999999999999999998 78999999999987666655 56788886653
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=217.23 Aligned_cols=245 Identities=21% Similarity=0.424 Sum_probs=207.9
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC------------c------eEEEEEecCCCCeEEEEeC--Cc
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV------------A------KQVHKLVGHTARVGALAWN--GD 608 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t------------g------k~i~tl~gHs~~V~sLawn--g~ 608 (819)
..+..|.+++.+.+|++||.++|+|+.|..|+|.|++. + -.++++-.|...|+++.|. ..
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 34567899999999999999999999999999999861 1 2467888999999999996 55
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE---ecCCCCEE
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY---TEHLAAVK 685 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~---~~h~~~Vt 685 (819)
+|++|++|++|+++|+.....+...+.......|.++.|+|.|.+++.|.+..++++||+.+.++...- .+|.++|+
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~ 265 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAIT 265 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccccee
Confidence 999999999999999987654444444455678999999999999999999999999999988765443 36899999
Q ss_pred EEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEE
Q psy10114 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV 762 (819)
Q Consensus 686 sLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l 762 (819)
++.+++.++ +.++++ .||.|++||--+++++.++. .++.|++..|..+|+++++ .+.|..+++|.+.+++.+
T Consensus 266 ~V~Ys~t~~-lYvTaS--kDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLs--SG~DS~vkLWEi~t~R~l 340 (430)
T KOG0640|consen 266 QVRYSSTGS-LYVTAS--KDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILS--SGKDSTVKLWEISTGRML 340 (430)
T ss_pred EEEecCCcc-EEEEec--cCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEee--cCCcceeeeeeecCCceE
Confidence 999999998 666665 99999999999999998873 4678999999999999999 779999999999887766
Q ss_pred EEEe-------------------------------------------------cCCCCEEEEEEecCCCEEEEEeCCCcE
Q psy10114 763 AKLT-------------------------------------------------GHSYRVLYLAMSPDGEAIVTGAGDETL 793 (819)
Q Consensus 763 ~sl~-------------------------------------------------gH~~~VtsLafSpDG~~LaSGS~DGtI 793 (819)
.++. +|++.+..+.-||.+.-+++|+.|-..
T Consensus 341 ~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~ra 420 (430)
T KOG0640|consen 341 KEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRA 420 (430)
T ss_pred EEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeeccccee
Confidence 5433 366778888888888889999999999
Q ss_pred EEEEC
Q psy10114 794 RFWNV 798 (819)
Q Consensus 794 rIWdl 798 (819)
|+|--
T Consensus 421 RFWyr 425 (430)
T KOG0640|consen 421 RFWYR 425 (430)
T ss_pred eeeee
Confidence 99953
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-21 Score=203.12 Aligned_cols=271 Identities=15% Similarity=0.158 Sum_probs=205.8
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEE-EEEecCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLV-AVGTHHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
+.+++++.|+.|++||..+++..... ..+ ..+.+++|+|+|+.+ ++++.++.|++||..+++....+..+.. +..
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~--~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~ 77 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTF--PVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PEL 77 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEE--ECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccE
Confidence 35678889999999999988765543 333 346789999999876 5667889999999999988877765443 456
Q ss_pred EEe--CCcee-eeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC-eEEEEECCCCceeEEEe
Q psy10114 603 LAW--NGDML-SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN-RLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 603 Law--ng~~L-aSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG-tI~IWDl~t~~~i~t~~ 678 (819)
++| +++.+ ++++.|+.+++||+++.+. +..+. +...+.+++|+|+|+.+++++.++ .+.+||.++++......
T Consensus 78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~--~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 154 (300)
T TIGR03866 78 FALHPNGKILYIANEDDNLVTVIDIETRKV--LAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL 154 (300)
T ss_pred EEECCCCCEEEEEcCCCCeEEEEECCCCeE--EeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE
Confidence 777 45555 4556789999999987542 23333 234568899999999999988775 56788998887765543
Q ss_pred cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC--------CCeEEEEEccCCCEEEEEEecCCCe
Q psy10114 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--------SQVCNLAWSKHSSELVSTHGYSQNQ 750 (819)
Q Consensus 679 ~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--------s~V~sLafSpdg~~LastsGssDg~ 750 (819)
. .....+++|+|+++.+++++. .++.|++||+.+++.+..+... .....++|+|+++.++++ ...++.
T Consensus 155 ~-~~~~~~~~~s~dg~~l~~~~~--~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~-~~~~~~ 230 (300)
T TIGR03866 155 V-DQRPRFAEFTADGKELWVSSE--IGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVA-LGPANR 230 (300)
T ss_pred c-CCCccEEEECCCCCEEEEEcC--CCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEE-cCCCCe
Confidence 2 344578999999998877653 6899999999999877665321 124568899999987664 345678
Q ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe-CCCcEEEEECCCCceecc
Q psy10114 751 ILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 751 I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl~s~~~~~k 806 (819)
+.+||..+++.+..+. +...+.+++|+|+|++|++++ .+|.|++||+.+++...+
T Consensus 231 i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~ 286 (300)
T TIGR03866 231 VAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKS 286 (300)
T ss_pred EEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 9999999888776554 445789999999999998864 589999999999876444
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-22 Score=208.65 Aligned_cols=248 Identities=16% Similarity=0.265 Sum_probs=208.2
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC--CCeEEEEECCC
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR--DRMILQRDVRT 626 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~--DGtI~IWDi~t 626 (819)
+....+.|+++.|+.+|..+++++.|.++++||..++++++++..+.-.|..+.| ..+.++.++. |.+|+.-++.+
T Consensus 10 f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d 89 (311)
T KOG1446|consen 10 FRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD 89 (311)
T ss_pred cccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec
Confidence 4445789999999999999999999999999999999999999998888888888 4556666665 88999999988
Q ss_pred CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
++ .++.+.||...|.+++.+|-+..+++++.|++|++||++..++...+..... ..+||+|+|- ++|++. ...
T Consensus 90 Nk--ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GL-ifA~~~--~~~ 162 (311)
T KOG1446|consen 90 NK--YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGL-IFALAN--GSE 162 (311)
T ss_pred Cc--eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCc-EEEEec--CCC
Confidence 65 6799999999999999999999999999999999999998887766654333 4578999997 444443 334
Q ss_pred eEEEEECCCC--ceeEEEc----CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCE---EEEEE
Q psy10114 707 CIRFWNTLTG--QPMQCVD----TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRV---LYLAM 777 (819)
Q Consensus 707 tIrIWDl~tg--~~v~~l~----~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~V---tsLaf 777 (819)
.|++||++.- .+..++. ...+.+.+.|||||+.++. +...+.+.+.|.-+|....++.++...- .+.+|
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLl--sT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILL--STNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF 240 (311)
T ss_pred eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEE--EeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE
Confidence 9999999863 3444442 3467899999999999999 6688999999999999999988775432 67899
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 778 SPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 778 SpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+|||+++++|+.||+|.+|+++++.+..+-
T Consensus 241 tPds~Fvl~gs~dg~i~vw~~~tg~~v~~~ 270 (311)
T KOG1446|consen 241 TPDSKFVLSGSDDGTIHVWNLETGKKVAVL 270 (311)
T ss_pred CCCCcEEEEecCCCcEEEEEcCCCcEeeEe
Confidence 999999999999999999999988775543
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=227.88 Aligned_cols=241 Identities=21% Similarity=0.338 Sum_probs=209.2
Q ss_pred CCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc
Q psy10114 554 DGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 554 h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
..+.|++++|+|... -+|+.+. -.++||+..+....+++......|.++.| +|..|++|+..|.|+++|..+ ..
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~--r~ 101 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS--RV 101 (487)
T ss_pred ccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc--HH
Confidence 357899999999653 3454443 46999999988888888888889999999 699999999999999999554 23
Q ss_pred ceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 631 SERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
.+..+.+|..+|....|+|++ ..+++|++|+.+++||+.+......+.+|...|.+.+|+|....++++|| .||+|+
T Consensus 102 iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGs--YDg~vr 179 (487)
T KOG0310|consen 102 ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGS--YDGKVR 179 (487)
T ss_pred HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecC--CCceEE
Confidence 567889999999999999955 56788888999999999998876689999999999999999999999987 999999
Q ss_pred EEECCCC-ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE-EEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 710 FWNTLTG-QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ-VAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 710 IWDl~tg-~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~-l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
+||++.. ..+.+++++.+|.++.+-|.|..+++++| +.|++||+.+|.+ +..+..|...|+|+++..++..|++|
T Consensus 180 l~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgG---n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~ 256 (487)
T KOG0310|consen 180 LWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGG---NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSG 256 (487)
T ss_pred EEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCC---CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeec
Confidence 9999987 88899999999999999999999999643 7899999986555 45555599999999999999999999
Q ss_pred eCCCcEEEEECCCCc
Q psy10114 788 AGDETLRFWNVFSKV 802 (819)
Q Consensus 788 S~DGtIrIWdl~s~~ 802 (819)
+-|+.|++||+.+-+
T Consensus 257 sLD~~VKVfd~t~~K 271 (487)
T KOG0310|consen 257 SLDRHVKVFDTTNYK 271 (487)
T ss_pred ccccceEEEEccceE
Confidence 999999999976544
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=239.81 Aligned_cols=289 Identities=21% Similarity=0.335 Sum_probs=233.2
Q ss_pred EEEEE--ecCCeEEEEE--CCCeEEEEEcCCC----------ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEE
Q psy10114 516 LNLVD--WSSQNVLSVG--LGSCVYLWSACTS----------QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 516 v~~ld--wS~~~LLa~g--~Dg~V~LWd~~tg----------~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~I 581 (819)
+.+++ .++..+++|| .|+.+.||+.+.- -...+++...|.+.|+|+.|++||++||+|++|+.|.|
T Consensus 16 IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~i 95 (942)
T KOG0973|consen 16 IFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMI 95 (942)
T ss_pred EEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEE
Confidence 44444 4456789998 8889999986431 12345778889999999999999999999999999999
Q ss_pred eecCC------------------ceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCC
Q psy10114 582 WDVSV------------------AKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE 641 (819)
Q Consensus 582 WDl~t------------------gk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~ 641 (819)
|+... .+.+..+.+|.+.|..++|+ +.+|+++|.|++|.+|+.++.+ ....+.+|.+.
T Consensus 96 W~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~--~~~vl~~H~s~ 173 (942)
T KOG0973|consen 96 WERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE--LLKVLRGHQSL 173 (942)
T ss_pred eeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccce--eeeeeeccccc
Confidence 98762 13677889999999999995 7799999999999999999974 56899999999
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC------CCCEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECC
Q psy10114 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH------LAAVKAIAWSPHHHGLLASGG-GTADRCIRFWNTL 714 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h------~~~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~ 714 (819)
|.++.|.|-|++||+-+.|++|+||++.+....+.+.++ ..-+..+.|||||+++++.-+ ...-.++.|.+-.
T Consensus 174 VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~ 253 (942)
T KOG0973|consen 174 VKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERG 253 (942)
T ss_pred ccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecC
Confidence 999999999999999999999999998887777776654 335788999999998776543 0123467788766
Q ss_pred CCce-eEEEcCCCCeEEEEEccC--------C-------CEEEEEEecCCCeEEEEECCCCcEEEEEec-CCCCEEEEEE
Q psy10114 715 TGQP-MQCVDTGSQVCNLAWSKH--------S-------SELVSTHGYSQNQILVWKYPTLTQVAKLTG-HSYRVLYLAM 777 (819)
Q Consensus 715 tg~~-v~~l~~~s~V~sLafSpd--------g-------~~LastsGssDg~I~IWDl~s~k~l~sl~g-H~~~VtsLaf 777 (819)
+-+. ..-+.|..++.++.|+|. | .+.+++.|+.|+.|.||.....+++..... ....|.+++|
T Consensus 254 tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsW 333 (942)
T KOG0973|consen 254 TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSW 333 (942)
T ss_pred CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeE
Confidence 5553 334478889999999982 1 233555599999999999988888765542 3567999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 778 SPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 778 SpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+|||..|..+|.||+|.+..++.++.-..
T Consensus 334 spdG~~LfacS~DGtV~~i~Fee~ElG~~ 362 (942)
T KOG0973|consen 334 SPDGFSLFACSLDGTVALIHFEEKELGVA 362 (942)
T ss_pred cCCCCeEEEEecCCeEEEEEcchHHhCcc
Confidence 99999999999999999999987664433
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-23 Score=210.57 Aligned_cols=250 Identities=22% Similarity=0.403 Sum_probs=216.4
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE--EecCCCCeEEEEe---CCceeeeccCCCeEEEEEC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK--LVGHTARVGALAW---NGDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t--l~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi 624 (819)
++.+|.+.|.+++|+.+|..|++|+.|+++.+|+++..+.... ..+|.+.|-.++| +++.+++++.|++|++||+
T Consensus 15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~ 94 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDI 94 (313)
T ss_pred HhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEe
Confidence 4567889999999999999999999999999999988765544 3589999999999 5789999999999999999
Q ss_pred CCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
+.+++. ...... .+=.-+.|+|+|++++.|+.|..|.+.|.++.+.....+ ....+..++|+.++..++++.|
T Consensus 95 r~~k~~--~~i~~~-~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~G--- 167 (313)
T KOG1407|consen 95 RSGKCT--ARIETK-GENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNG--- 167 (313)
T ss_pred ccCcEE--EEeecc-CcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecC---
Confidence 998753 333332 333457899999999999999999999999988776654 4566788999988887777754
Q ss_pred CCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE
Q psy10114 705 DRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~ 783 (819)
.|+|.|.....-++++.+. |.+...++.|+|+|+++++ |+.|..+.+||+...-++..+..++-+|..++||.||++
T Consensus 168 lG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~--GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~ 245 (313)
T KOG1407|consen 168 LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFAT--GSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRM 245 (313)
T ss_pred CceEEEEeccccccccccccCCcceEEEEECCCCceEee--ccccceeeccChhHhhhheeeccccCceEEEEeccCcce
Confidence 7999999999889988884 6788899999999999999 999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCceecccc
Q psy10114 784 IVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
||+||+|..|-|=++.+|.+..+.+
T Consensus 246 lASaSEDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 246 LASASEDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred eeccCccceEEeEecccCCeEEEee
Confidence 9999999999999999888765543
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=213.40 Aligned_cols=234 Identities=27% Similarity=0.506 Sum_probs=199.0
Q ss_pred EEEEEecC---CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCceEEE
Q psy10114 516 LNLVDWSS---QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 516 v~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
+..+.|+. +.+++++.||+++|||... ....+..++.|..+|.++.|++ ++..+++++.||+|++||...++.++
T Consensus 63 LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~-~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~ 141 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDGSLRLFDLTM-PSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQ 141 (311)
T ss_pred eeEeeecCCCcceEEEEecCceEEEeccCC-CCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceE
Confidence 45577885 4689999999999999543 3346677889999999999998 56778889999999999999999999
Q ss_pred EEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEE
Q psy10114 592 KLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWD 667 (819)
++.||...|...+|+ ++.++++|.||.+++||++..... ..+..|..+|.++.|+. +.+.+++|+.|+.|+.||
T Consensus 142 Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~--~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wD 219 (311)
T KOG0277|consen 142 TFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKF--MSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWD 219 (311)
T ss_pred eecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCce--eEEEeccceeEeecccccCCcEEEecCCCceEEEEe
Confidence 999999999999994 789999999999999999987633 44889999999999998 677899999999999999
Q ss_pred CCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEEc-CCCCeEEEEEccCCC-EEEEE
Q psy10114 668 LHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCVD-TGSQVCNLAWSKHSS-ELVST 743 (819)
Q Consensus 668 l~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l~-~~s~V~sLafSpdg~-~Last 743 (819)
+++. .++..+.+|.-+|..++|||+...++++++ .|-++|+||...+. .+.+.+ |..-++.+.||+... .++.
T Consensus 220 ir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSas--YDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs- 296 (311)
T KOG0277|consen 220 IRNLRTPLFELNGHGLAVRKVKFSPHHASLLASAS--YDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVAS- 296 (311)
T ss_pred hhhccccceeecCCceEEEEEecCcchhhHhhhcc--ccceEEecccccchhhhhhhhccceEEeccccccccCceeee-
Confidence 9875 478889999999999999999999999987 99999999998554 344444 344588999998644 4555
Q ss_pred EecCCCeEEEEEC
Q psy10114 744 HGYSQNQILVWKY 756 (819)
Q Consensus 744 sGssDg~I~IWDl 756 (819)
.+-|+.+.||+-
T Consensus 297 -~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 297 -TGWDELLYVWNP 308 (311)
T ss_pred -cccccceeeecc
Confidence 558999999983
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-21 Score=227.98 Aligned_cols=245 Identities=12% Similarity=0.230 Sum_probs=188.5
Q ss_pred EECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCce--------EEEEEecCCCC
Q psy10114 529 VGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVAK--------QVHKLVGHTAR 599 (819)
Q Consensus 529 ~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tgk--------~i~tl~gHs~~ 599 (819)
||.++.|++|+..... .+..+.+|.+.|.+++|+|+ +++||+|+.||+|+|||+.++. .+..+.+|...
T Consensus 50 GG~~gvI~L~~~~r~~--~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~ 127 (568)
T PTZ00420 50 GGLIGAIRLENQMRKP--PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK 127 (568)
T ss_pred CCceeEEEeeecCCCc--eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence 4566789999876643 45678899999999999996 7899999999999999997542 34567899999
Q ss_pred eEEEEeCC--c-eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE
Q psy10114 600 VGALAWNG--D-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 600 V~sLawng--~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t 676 (819)
|.+++|++ . .+++|+.|++|++||+++++. ...+. |...|.+++|+++|++|++++.|+.|++||+++++.+.+
T Consensus 128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~--~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~t 204 (568)
T PTZ00420 128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR--AFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASS 204 (568)
T ss_pred EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcE--EEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 99999963 3 568999999999999998763 23343 567899999999999999999999999999999999999
Q ss_pred EecCCCCEEEE-----EEcCCCCeEEEEEcc-CCCCeEEEEECCC-CceeEEEcCCCCeEE--EEE-ccCCCEEEEEEec
Q psy10114 677 YTEHLAAVKAI-----AWSPHHHGLLASGGG-TADRCIRFWNTLT-GQPMQCVDTGSQVCN--LAW-SKHSSELVSTHGY 746 (819)
Q Consensus 677 ~~~h~~~VtsL-----afSPdg~~LLaSGgG-s~DgtIrIWDl~t-g~~v~~l~~~s~V~s--Laf-Spdg~~LastsGs 746 (819)
+.+|.+.+.+. .|++++..++++|.. ..+++|++||+++ ++++.....+..... ..+ .++|..+++ |.
T Consensus 205 l~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~ls--Gk 282 (568)
T PTZ00420 205 FHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLI--GK 282 (568)
T ss_pred EecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEE--EE
Confidence 99998765433 345888877777641 1235899999995 666666544333222 233 344666666 78
Q ss_pred CCCeEEEEECCCCcEEEEEe--cCCCCEEEEEEecCC
Q psy10114 747 SQNQILVWKYPTLTQVAKLT--GHSYRVLYLAMSPDG 781 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl~--gH~~~VtsLafSpDG 781 (819)
.|+.|++|++..+. +..+. .+..++.+++|.|+.
T Consensus 283 GD~tIr~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 283 GDGNCRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred CCCeEEEEEccCCc-EEeecccccCCCccceEEcccc
Confidence 89999999997653 33332 256778899999974
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-23 Score=230.55 Aligned_cols=271 Identities=18% Similarity=0.275 Sum_probs=226.0
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEE---Ee--------------------------------ccCCCCCeEEEEEcCCCC
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRL---CD--------------------------------LSADGNSVTSVAWNERGN 568 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l---~~--------------------------------l~~h~~~VtsLafSpdG~ 568 (819)
..+++++.|++|++||+..+....+ .. .-+....+.+++.+|+|+
T Consensus 393 ~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gq 472 (1080)
T KOG1408|consen 393 GCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQ 472 (1080)
T ss_pred cceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcc
Confidence 4589999999999999876321111 00 001123689999999999
Q ss_pred EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC-----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN-----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVC 643 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn-----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~Vt 643 (819)
+||+|..-|+++|||+...+....+..|...|.|+.++ ..+|+++++|+.|.++|+..+- ..+.++.+|...|+
T Consensus 473 hLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny-~l~qtld~HSssIT 551 (1080)
T KOG1408|consen 473 HLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY-DLVQTLDGHSSSIT 551 (1080)
T ss_pred eecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc-chhhhhccccccee
Confidence 99999999999999999999999999999999999994 3489999999999999998754 45688999999999
Q ss_pred EEEECCCC--CEEEEEECCCeEEEEECCCCceeEEEec-----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 644 GLKWSPDN--QYLASGGNDNRLYVWNLHSMSPLQTYTE-----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 644 sLafSpdg--~~LaSGS~DGtI~IWDl~t~~~i~t~~~-----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
+++|..+| ..+++++.|..|.+--.+.......|.. ....+..++..|..+.+++.+ .|+.|+|||+.+|
T Consensus 552 svKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c---QDrnirif~i~sg 628 (1080)
T KOG1408|consen 552 SVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC---QDRNIRIFDIESG 628 (1080)
T ss_pred EEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe---cccceEEEecccc
Confidence 99998877 6889999998876543332222222222 246788999999998666655 8999999999999
Q ss_pred ceeEEEc----CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCc
Q psy10114 717 QPMQCVD----TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDET 792 (819)
Q Consensus 717 ~~v~~l~----~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGt 792 (819)
+.++.++ +++....+...|.|.++++ .+.|.++.++|+-++++++.+.||...|+.+.|.+|.+.|++.++||.
T Consensus 629 Kq~k~FKgs~~~eG~lIKv~lDPSgiY~at--Scsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgC 706 (1080)
T KOG1408|consen 629 KQVKSFKGSRDHEGDLIKVILDPSGIYLAT--SCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGC 706 (1080)
T ss_pred ceeeeecccccCCCceEEEEECCCccEEEE--eecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCce
Confidence 9999884 3466788999999999999 779999999999999999999999999999999999999999999999
Q ss_pred EEEEECCC
Q psy10114 793 LRFWNVFS 800 (819)
Q Consensus 793 IrIWdl~s 800 (819)
|.+|.+..
T Consensus 707 IFvW~lp~ 714 (1080)
T KOG1408|consen 707 IFVWKLPL 714 (1080)
T ss_pred EEEEECch
Confidence 99999865
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=217.13 Aligned_cols=243 Identities=20% Similarity=0.326 Sum_probs=208.8
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE--------ecCCCCeEEEEe--CCceeeeccCCCeEEEEEC
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL--------VGHTARVGALAW--NGDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl--------~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi 624 (819)
.+.+.|..|+|||++|++|+.||.|.+||..+|+..+.+ --+...|.|+.| +...+++|+.||.|++|.+
T Consensus 213 KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri 292 (508)
T KOG0275|consen 213 KSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRI 292 (508)
T ss_pred ccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEE
Confidence 466889999999999999999999999999998765433 357889999999 4669999999999999999
Q ss_pred CCCCccceEEEe-cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 625 RTPNSQSERRLV-GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 625 ~t~~~~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
+++.+. +.+. .|+..|+|+.||.|+..+++++.|.++++.-+++|++++.|++|..-|+...|.++|..++.++
T Consensus 293 ~tG~Cl--RrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaS--- 367 (508)
T KOG0275|consen 293 ETGQCL--RRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISAS--- 367 (508)
T ss_pred ecchHH--HHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEec---
Confidence 998753 4554 8999999999999999999999999999999999999999999999999999999999888765
Q ss_pred CCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEEec---CCCCEEEEE
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKLTG---HSYRVLYLA 776 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl~g---H~~~VtsLa 776 (819)
.||+|++|+..+++++.++.. +..|.++..-|... .+++ +...+++.+.++ .|+.+.++.. ..+...+.+
T Consensus 368 sDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iV--CNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~ 444 (508)
T KOG0275|consen 368 SDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIV--CNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAI 444 (508)
T ss_pred CCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEE--EcCCCeEEEEec-cceEEeeeccCCccCCceEEEE
Confidence 699999999999999988853 45688887777554 4444 567788998887 4677777653 245677888
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 777 MSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 777 fSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
.||.|.++...++|+.++.+.+.+++...
T Consensus 445 lSpkGewiYcigED~vlYCF~~~sG~LE~ 473 (508)
T KOG0275|consen 445 LSPKGEWIYCIGEDGVLYCFSVLSGKLER 473 (508)
T ss_pred ecCCCcEEEEEccCcEEEEEEeecCceee
Confidence 99999999999999999999999887543
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-21 Score=202.05 Aligned_cols=266 Identities=17% Similarity=0.289 Sum_probs=229.6
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCceEEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
+.++.|+ |..+++++.|+.+.+|++...+...-....+|.+.|-.++|+|. .+.+++++.|.+|++||+.+++++..
T Consensus 23 v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~ 102 (313)
T KOG1407|consen 23 VHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTAR 102 (313)
T ss_pred ceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEE
Confidence 5667777 67899999999999999988876665667889999999999984 57999999999999999999999999
Q ss_pred EecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 593 LVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 593 l~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
.....+.+.-.-+ +|+++++|+.|..|...|.++.+. ..-......+..++|+-++.+++....-|+|.|......
T Consensus 103 i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~---~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsL 179 (313)
T KOG1407|consen 103 IETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKI---VNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSL 179 (313)
T ss_pred eeccCcceEEEEcCCCCEEEEecCcccEEEEEecccce---eehhcccceeeeeeecCCCCEEEEecCCceEEEEecccc
Confidence 8876666654433 788999999999999999988553 222334567888999988887777777799999999999
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCe
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQ 750 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~ 750 (819)
++++.++.|.....||.|+|+|++++ +|+ .|..+.+||+..--+++.+ ..+-+|..+.||.||++|++ |++|..
T Consensus 180 kpv~si~AH~snCicI~f~p~GryfA-~Gs--ADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lAS--aSEDh~ 254 (313)
T KOG1407|consen 180 KPVQSIKAHPSNCICIEFDPDGRYFA-TGS--ADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLAS--ASEDHF 254 (313)
T ss_pred ccccccccCCcceEEEEECCCCceEe-ecc--ccceeeccChhHhhhheeeccccCceEEEEeccCcceeec--cCccce
Confidence 99999999999999999999999655 444 8999999999988888887 46788999999999999999 889999
Q ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 751 ILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 751 I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
|-|=++++|..+.+++ +.++-..++|+|...+||-++.|
T Consensus 255 IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 255 IDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred EEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence 9999999999999987 78889999999999999987765
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=226.30 Aligned_cols=225 Identities=18% Similarity=0.319 Sum_probs=177.9
Q ss_pred EecCceEEEeecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCc------cceEEEecccCCeE
Q psy10114 573 GTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNS------QSERRLVGHRQEVC 643 (819)
Q Consensus 573 Gs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~------~~v~~l~gH~~~Vt 643 (819)
|+.+|.|++|+..+...+..+.+|.+.|.+++|+ +++|++|+.||+|++||+.++.. .....+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 6678899999998888889999999999999995 56999999999999999986431 12346788999999
Q ss_pred EEEECCCCCE-EEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 644 GLKWSPDNQY-LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 644 sLafSpdg~~-LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
+++|+|++.. +++|+.|++|++||+++++.+..+. |...|.+++|+|+|..+++++ .|+.|++||+++++.+..+
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s---~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTC---VGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEe---cCCEEEEEECCCCcEEEEE
Confidence 9999998875 5789999999999999998877775 667899999999999665443 7999999999999988877
Q ss_pred c-CCCCe-----EEEEEccCCCEEEEEEecCC---CeEEEEECCC-CcEEEEEe--cCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 723 D-TGSQV-----CNLAWSKHSSELVSTHGYSQ---NQILVWKYPT-LTQVAKLT--GHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 723 ~-~~s~V-----~sLafSpdg~~LastsGssD---g~I~IWDl~s-~k~l~sl~--gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
. |.+.+ ....|++++++++++ |.++ ++|++||+++ .+++..+. .+.+.+......++|.++++|++|
T Consensus 206 ~gH~g~~~s~~v~~~~fs~d~~~IlTt-G~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD 284 (568)
T PTZ00420 206 HIHDGGKNTKNIWIDGLGGDDNYILST-GFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGD 284 (568)
T ss_pred ecccCCceeEEEEeeeEcCCCCEEEEE-EcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECC
Confidence 4 33332 223456888888885 3332 4899999985 55555443 233334444445568999999999
Q ss_pred CcEEEEECCCCc
Q psy10114 791 ETLRFWNVFSKV 802 (819)
Q Consensus 791 GtIrIWdl~s~~ 802 (819)
++|++|++..+.
T Consensus 285 ~tIr~~e~~~~~ 296 (568)
T PTZ00420 285 GNCRYYQHSLGS 296 (568)
T ss_pred CeEEEEEccCCc
Confidence 999999997653
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=216.89 Aligned_cols=251 Identities=19% Similarity=0.300 Sum_probs=213.0
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---eEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEEC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---k~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi 624 (819)
.+..|.+.|.-+.||++|++||+++.|.+..||++... +..+++.+|..+|..+.|+ .++|++++.|..+.+||+
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccC
Confidence 46789999999999999999999999999999988644 4578889999999999994 569999999999999999
Q ss_pred CCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC-CCCEEEEEEcCCCCeEEEEEccC
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH-LAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h-~~~VtsLafSPdg~~LLaSGgGs 703 (819)
.+++..... -.++...+.+.+|.|||..+++|+.|+++..||+.. +.+...++- ...|.+++.++||+.+++++
T Consensus 299 ~tgd~~~~y-~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~v~--- 373 (519)
T KOG0293|consen 299 DTGDLRHLY-PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLLVT--- 373 (519)
T ss_pred Ccchhhhhc-ccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc-chhhcccccccceeEEEEEcCCCcEEEEEe---
Confidence 998854222 233568899999999999999999999999999854 444444443 35689999999999999987
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC--EEEEEEec-C
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR--VLYLAMSP-D 780 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~--VtsLafSp-D 780 (819)
.|..|++++..+......+....+|++++.|.+++++++ .-.+..+.+||+...+.+..+.||... +..-+|.- +
T Consensus 374 ~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~Lv--nL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~ 451 (519)
T KOG0293|consen 374 VDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALV--NLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGN 451 (519)
T ss_pred cccceeeechhhhhhhccccccCceeEEEEcCCCcEEEE--EcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCC
Confidence 699999999988877777788899999999999999988 678999999999998889999998654 44445543 5
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 781 GEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
..++++||+|+.|+||+-.+++.....
T Consensus 452 ~~fiaSGSED~kvyIWhr~sgkll~~L 478 (519)
T KOG0293|consen 452 DKFIASGSEDSKVYIWHRISGKLLAVL 478 (519)
T ss_pred cceEEecCCCceEEEEEccCCceeEee
Confidence 589999999999999999998876544
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-22 Score=228.96 Aligned_cols=245 Identities=23% Similarity=0.363 Sum_probs=209.3
Q ss_pred CcCCcceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 509 ELQDDFYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 509 ~l~dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
...+...+..+.+. ++.+++|+.|.++++||..+|+... .+.+|.+.|.++... +..+++|+.|.+|++|++++
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~--~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n 320 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTH--SLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTN 320 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEE--EecCCCceEEEEEcc--CceEeeccCCceEEEEeccC
Confidence 33444456667767 7899999999999999999998865 567899999998875 55788899999999999999
Q ss_pred ceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 587 AKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
+..+..+.+|.+.|.++..+++++++|+.||+|++||+.+.+ .+..+.+|...|.++.+... ..+++|+.|++|++|
T Consensus 321 ~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~--cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvW 397 (537)
T KOG0274|consen 321 GACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGK--CLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVW 397 (537)
T ss_pred cceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhhce--eeeeecCCcceEEEEEecCc-ceEEeeeeccceEee
Confidence 999999999999999999999999999999999999999755 67899999999999988765 899999999999999
Q ss_pred ECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC--CCeEEEEEccCCCEEEEE
Q psy10114 667 NLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVST 743 (819)
Q Consensus 667 Dl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg~~Last 743 (819)
|+++. +++..+.+|.+-|..+.+.. + ++++++ .|++|++||..++++++.+... ..|..+++. ...+++
T Consensus 398 dl~~~~~c~~tl~~h~~~v~~l~~~~--~-~Lvs~~--aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~- 469 (537)
T KOG0274|consen 398 DLRTKRKCIHTLQGHTSLVSSLLLRD--N-FLVSSS--ADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILC- 469 (537)
T ss_pred cCCchhhhhhhhcCCccccccccccc--c-eeEecc--ccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEE-
Confidence 99999 99999999999987766543 3 455554 8999999999999999999764 667777765 345555
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCC
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHS 769 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~ 769 (819)
++.|+.+.+||+++++....+-.+.
T Consensus 470 -s~~~~~~~l~dl~~~~~~~~l~~~~ 494 (537)
T KOG0274|consen 470 -SSDDGSVKLWDLRSGTLIRTLLSTD 494 (537)
T ss_pred -EecCCeeEEEecccCchhhhhhhcc
Confidence 6789999999999999988774444
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-22 Score=223.30 Aligned_cols=264 Identities=20% Similarity=0.298 Sum_probs=224.6
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEE-EEEcC-CCCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTS-VAWNE-RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~Vts-LafSp-dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
+..++++|.|+++++|+-...+......+.++.+-|.+ +++-+ ++-.+++|+.|++|.+|...+..+..++++|.+.|
T Consensus 25 ~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snV 104 (745)
T KOG0301|consen 25 GVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNV 104 (745)
T ss_pred CeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccce
Confidence 45689999999999999988888777778888888777 88875 45579999999999999999999999999999999
Q ss_pred EEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec
Q psy10114 601 GALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 601 ~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~ 679 (819)
.|++- +...++|||.|.++++|.... ....+.+|...|.+++.-|++ .+++|+.|.+|++|.- ++.+++|.+
T Consensus 105 C~ls~~~~~~~iSgSWD~TakvW~~~~----l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~g 177 (745)
T KOG0301|consen 105 CSLSIGEDGTLISGSWDSTAKVWRIGE----LVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSG 177 (745)
T ss_pred eeeecCCcCceEecccccceEEecchh----hhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhcc
Confidence 99997 455689999999999998765 335689999999999999987 8999999999999985 788999999
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~ 759 (819)
|...|+.+++-+++. ++. ++ .||.|++||+..+.......|.+-+.++....++..+++ .++|+++++|+..
T Consensus 178 HtD~VRgL~vl~~~~-flS-cs--NDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs--~gEDrtlriW~~~-- 249 (745)
T KOG0301|consen 178 HTDCVRGLAVLDDSH-FLS-CS--NDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVS--TGEDRTLRIWKKD-- 249 (745)
T ss_pred chhheeeeEEecCCC-eEe-ec--CCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEE--ecCCceEEEeecC--
Confidence 999999999999876 444 33 899999999954444455578888999998888888888 6699999999976
Q ss_pred cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 760 k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+..+.++-....|+++.+-++|. |++|+.||.||+|.....+
T Consensus 250 e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~R 291 (745)
T KOG0301|consen 250 ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKDR 291 (745)
T ss_pred ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEecccc
Confidence 66666765566899999988886 6679999999999987544
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=220.77 Aligned_cols=245 Identities=18% Similarity=0.357 Sum_probs=218.2
Q ss_pred EeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCC
Q psy10114 549 CDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~ 627 (819)
..+.+|.+.|.|++=+|.. ..+|+|+.||.|+|||+.+.++..+++.|.+.|..++++.+.+++++.|++|+.|.+..+
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~ 139 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGP 139 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccCC
Confidence 3567899999999999977 789999999999999999999999999999999999998899999999999999998874
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
...++. ....+.++.-+..+..+|++|+ .|.|||.+-..|++++.-....|.++.|+|....++++++ .|+.
T Consensus 140 ---p~~til-g~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~--sDrs 211 (433)
T KOG0268|consen 140 ---PLHTIL-GKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCA--SDRS 211 (433)
T ss_pred ---cceeee-ccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeec--cCCc
Confidence 334443 3456778887777888999886 5999999999999999988899999999999999999987 8999
Q ss_pred EEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC-cEEEEEecCCCCEEEEEEecCCCEEEE
Q psy10114 708 IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL-TQVAKLTGHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~-k~l~sl~gH~~~VtsLafSpDG~~LaS 786 (819)
|.+||++++.+++.+-.+..-+.++|+|.+-.+++ |.+|..+..+|++.. .++....+|.+.|.+++|||.|+-+++
T Consensus 212 IvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~--a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvs 289 (433)
T KOG0268|consen 212 IVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVA--ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVS 289 (433)
T ss_pred eEEEecccCCccceeeeeccccceecCccccceee--ccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcc
Confidence 99999999999999988888899999996555555 899999999999864 567788899999999999999999999
Q ss_pred EeCCCcEEEEECCCCce
Q psy10114 787 GAGDETLRFWNVFSKVR 803 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~~ 803 (819)
||.|.+||||.+..+..
T Consensus 290 gsyDksIRIf~~~~~~S 306 (433)
T KOG0268|consen 290 GSYDKSIRIFPVNHGHS 306 (433)
T ss_pred ccccceEEEeecCCCcc
Confidence 99999999999987653
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-22 Score=234.12 Aligned_cols=248 Identities=24% Similarity=0.424 Sum_probs=211.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe--cCceEEEeecCC------------ceEEEEEecCCCCeEEEEe--CCceeeeccCC
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGT--HHGYVQVWDVSV------------AKQVHKLVGHTARVGALAW--NGDMLSSGSRD 616 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs--~DGtI~IWDl~t------------gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~D 616 (819)
.++..|.++..+|||..+|+|+ .||.+.||+.+. .+.+.++..|.+.|.|+.| ||.+||+||+|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 3456799999999999999999 899999998742 2446677889999999999 78899999999
Q ss_pred CeEEEEECCC----C------------CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC
Q psy10114 617 RMILQRDVRT----P------------NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 617 GtI~IWDi~t----~------------~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h 680 (819)
+.|.+|+... . ....+..+.+|...|..++|+|++.++|+++.|++|.+||.++.+.+..+.+|
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H 170 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH 170 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc
Confidence 9999999872 0 12345678899999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-------CCCCeEEEEEccCCCEEEEEEecCC--CeE
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-------TGSQVCNLAWSKHSSELVSTHGYSQ--NQI 751 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-------~~s~V~sLafSpdg~~LastsGssD--g~I 751 (819)
.+.|..+.|.|-|+++++-+ .|++|++|++.+-...+.+. .......+.|||||.+|++.++... ..+
T Consensus 171 ~s~VKGvs~DP~Gky~ASqs---dDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~ 247 (942)
T KOG0973|consen 171 QSLVKGVSWDPIGKYFASQS---DDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTI 247 (942)
T ss_pred cccccceEECCccCeeeeec---CCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCccee
Confidence 99999999999999776654 79999999987766655552 2345789999999999999765443 368
Q ss_pred EEEECCCCcEEEEEecCCCCEEEEEEecC-----CC------------EEEEEeCCCcEEEEECCCCce
Q psy10114 752 LVWKYPTLTQVAKLTGHSYRVLYLAMSPD-----GE------------AIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~gH~~~VtsLafSpD-----G~------------~LaSGS~DGtIrIWdl~s~~~ 803 (819)
.|.+-.+.+.-..+.||.+++.+++|+|. .+ .+|+|+.|++|-||.....++
T Consensus 248 ~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RP 316 (942)
T KOG0973|consen 248 AIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRP 316 (942)
T ss_pred EEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCc
Confidence 99998888888999999999999999982 11 678899999999999866554
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-22 Score=217.29 Aligned_cols=275 Identities=21% Similarity=0.335 Sum_probs=215.7
Q ss_pred EEEecCCeEEEEECCCeEEEEEcCCCceEE--EEec-cCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE---
Q psy10114 518 LVDWSSQNVLSVGLGSCVYLWSACTSQVTR--LCDL-SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH--- 591 (819)
Q Consensus 518 ~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~--l~~l-~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~--- 591 (819)
.++.+|..+++|+.|..|++||........ ...+ ......|.+++|++.|..|++.+.....+|+|-+..+...
T Consensus 174 ~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~K 253 (641)
T KOG0772|consen 174 AVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSK 253 (641)
T ss_pred eecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeec
Confidence 445567899999999999999987643211 1111 2345689999999999999999888999999965433332
Q ss_pred ---------EEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEE-----ecccCCeEEEEECCCCCEE
Q psy10114 592 ---------KLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRL-----VGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 592 ---------tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l-----~gH~~~VtsLafSpdg~~L 654 (819)
..+||...++|.+|+ .+.+++++.||++++||+.....+ ...+ .+..-.++.++|++||+.+
T Consensus 254 GDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-~qVik~k~~~g~Rv~~tsC~~nrdg~~i 332 (641)
T KOG0772|consen 254 GDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-LQVIKTKPAGGKRVPVTSCAWNRDGKLI 332 (641)
T ss_pred cchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh-eeEEeeccCCCcccCceeeecCCCcchh
Confidence 235899999999994 568999999999999999876532 2222 2334568999999999999
Q ss_pred EEEECCCeEEEEECCCCc--e-eEEEecCCC--CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEE---cCC
Q psy10114 655 ASGGNDNRLYVWNLHSMS--P-LQTYTEHLA--AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCV---DTG 725 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~--~-i~t~~~h~~--~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l---~~~ 725 (819)
|+|..||.|.+||..+.. + ...-++|.. .|++|+||++|+.|+.-| .|+++++||++..+ ++... ...
T Consensus 333 Aagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg---~D~tLKvWDLrq~kkpL~~~tgL~t~ 409 (641)
T KOG0772|consen 333 AAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRG---FDDTLKVWDLRQFKKPLNVRTGLPTP 409 (641)
T ss_pred hhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhcc---CCCceeeeeccccccchhhhcCCCcc
Confidence 999999999999975432 2 223346766 899999999999877765 69999999999754 44332 334
Q ss_pred CCeEEEEEccCCCEEEEEE----ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 726 SQVCNLAWSKHSSELVSTH----GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 726 s~V~sLafSpdg~~Lasts----GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
-.-+.++|||+.+.+++.+ +...|.+.+||..+...+.++.-.+..|..+.|+|.-+.|..|++||+++++
T Consensus 410 ~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 410 FPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred CCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 5578899999999998843 2235689999999999999998888899999999998899999999999986
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-23 Score=229.14 Aligned_cols=273 Identities=18% Similarity=0.303 Sum_probs=234.5
Q ss_pred CCeEEEEECCCeEEEEEcCCCceE----EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--eEEEEEecC
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVT----RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--KQVHKLVGH 596 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~----~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--k~i~tl~gH 596 (819)
++++++||.||.|++|+....... .+..++.|.+.|+.++...+|+.|++++.|-+|++|+...+ -++.++..|
T Consensus 37 ~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H 116 (735)
T KOG0308|consen 37 GRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTH 116 (735)
T ss_pred CceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcc
Confidence 456999999999999998654321 25567889999999999999999999999999999999887 678889999
Q ss_pred CCCeEEEEe---CCceeeeccCCCeEEEEECCCCCc--------cceEEEe-cccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 597 TARVGALAW---NGDMLSSGSRDRMILQRDVRTPNS--------QSERRLV-GHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 597 s~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~--------~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
..-|.|++. +...+|+||-|+.|.+||+.++.. .....+. |+...|.+++.++.|..+++|+..+.++
T Consensus 117 ~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr 196 (735)
T KOG0308|consen 117 KDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLR 196 (735)
T ss_pred cchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceE
Confidence 999999999 677999999999999999997632 1122233 7889999999999999999999999999
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEE
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~Last 743 (819)
+||.++.+.+..+++|...|+++..++||..++.++ .||+|++||+...+++.++ -|...|+++..+|+-..+++
T Consensus 197 ~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~s---SDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYs- 272 (735)
T KOG0308|consen 197 LWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSAS---SDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYS- 272 (735)
T ss_pred EeccccccceeeeeccccceEEEEEcCCCCeEeecC---CCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEe-
Confidence 999999999999999999999999999999888754 6999999999999998887 46667999999999999999
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
|+.||.|..=|+++......+-..+.+|..+..+.+.+-+-+++.|+.|+-|....
T Consensus 273 -G~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 273 -GGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEP 328 (735)
T ss_pred -cCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCcc
Confidence 99999999999988655444555667788888876666667788999999998754
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-23 Score=220.67 Aligned_cols=251 Identities=22% Similarity=0.350 Sum_probs=216.4
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~ 625 (819)
.+..|.+.|..+.|-++...|++|+.|..|++|++..++ .+.++.|..+.|+++.| ++..+++++.|+.+++|++.
T Consensus 170 ~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd 249 (459)
T KOG0288|consen 170 VLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVD 249 (459)
T ss_pred hhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeecc
Confidence 356788999999999998999999999999999987666 67788888999999999 46789999999999999998
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
..+ ...++.+|++.|+++.|......+++|+.|.+|+.||+....+.++.- ....+.+|+.+ ...+++| ..|
T Consensus 250 ~~r--~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~---~~~~~Sg--H~D 321 (459)
T KOG0288|consen 250 SLR--LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS---ISDVISG--HFD 321 (459)
T ss_pred chh--hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec---ceeeeec--ccc
Confidence 865 458899999999999998877779999999999999999988777654 23455666665 2345554 499
Q ss_pred CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC----CCCEEEEEEecCC
Q psy10114 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH----SYRVLYLAMSPDG 781 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH----~~~VtsLafSpDG 781 (819)
++||+||.+++.+...++.++.|+++..+++|..+.+ .+.|..+.+.|.++.+....+.+. ....+.+.|||++
T Consensus 322 kkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLs--ssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~ 399 (459)
T KOG0288|consen 322 KKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLS--SSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDG 399 (459)
T ss_pred cceEEEeccCCceeeEeecCcceeeEeeccCCeEEee--ecCCCceeeeecccccEEEEeeccccccccccceeEECCCC
Confidence 9999999999999999999999999999999999999 578999999999998888777642 2348889999999
Q ss_pred CEEEEEeCCCcEEEEECCCCceecccccc
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQRESKS 810 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~k~~~s 810 (819)
.|+++||.||.|+||++++++...+...+
T Consensus 400 ~YvaAGS~dgsv~iW~v~tgKlE~~l~~s 428 (459)
T KOG0288|consen 400 SYVAAGSADGSVYIWSVFTGKLEKVLSLS 428 (459)
T ss_pred ceeeeccCCCcEEEEEccCceEEEEeccC
Confidence 99999999999999999999877665443
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=214.17 Aligned_cols=245 Identities=24% Similarity=0.485 Sum_probs=205.1
Q ss_pred CCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCce----------EEEEEecCCCCeEEEEeC---CceeeeccCCCe
Q psy10114 553 ADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAK----------QVHKLVGHTARVGALAWN---GDMLSSGSRDRM 618 (819)
Q Consensus 553 ~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk----------~i~tl~gHs~~V~sLawn---g~~LaSGS~DGt 618 (819)
.|.+.|+.+...|+. ..+|+++..|.|.|||..+-. .-.++.+|...-.+++|+ ...|++|+.|++
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 478999999999966 677788889999999986431 123778999988889995 448999999999
Q ss_pred EEEEECCCCCc-----cceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECC--CCceeEEEecCCCCEEEEEEc
Q psy10114 619 ILQRDVRTPNS-----QSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLH--SMSPLQTYTEHLAAVKAIAWS 690 (819)
Q Consensus 619 I~IWDi~t~~~-----~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~--t~~~i~t~~~h~~~VtsLafS 690 (819)
|.+||+..... .....+.+|...|..++|++ +...+++++.|+.+.|||+| +.++.....+|.+.|.|++|+
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn 281 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN 281 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence 99999986543 34567889999999999999 56688999999999999999 567777888999999999999
Q ss_pred CCCCeEEEEEccCCCCeEEEEECCCC-ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc--------
Q psy10114 691 PHHHGLLASGGGTADRCIRFWNTLTG-QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT-------- 760 (819)
Q Consensus 691 Pdg~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k-------- 760 (819)
|.+..++|+|+ .|++|.+||+++- +++.++ .+...|.++.|||+...+++++ +.|+.+.+||+..-.
T Consensus 282 p~~~~ilAT~S--~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASS-g~D~rl~vWDls~ig~eq~~eda 358 (422)
T KOG0264|consen 282 PFNEFILATGS--ADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASS-GTDRRLNVWDLSRIGEEQSPEDA 358 (422)
T ss_pred CCCCceEEecc--CCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEec-ccCCcEEEEeccccccccChhhh
Confidence 99999999987 9999999999984 345555 5778899999999988877764 489999999986321
Q ss_pred ------EEEEEecCCCCEEEEEEecCCC-EEEEEeCCCcEEEEECCC
Q psy10114 761 ------QVAKLTGHSYRVLYLAMSPDGE-AIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 761 ------~l~sl~gH~~~VtsLafSpDG~-~LaSGS~DGtIrIWdl~s 800 (819)
.+..-.||...|..+.|+|+.. .|+|.+.|+.+.||+...
T Consensus 359 ~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 359 EDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred ccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 2345568999999999999765 677899999999999874
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-21 Score=218.78 Aligned_cols=288 Identities=19% Similarity=0.307 Sum_probs=244.5
Q ss_pred cCCcceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc
Q psy10114 510 LQDDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 510 l~dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg 587 (819)
...++....+..+- +.++.|+.+|.+.+||+.+++.. ++++++.+.|+++.=+|-=+.+|+|..+|+|.|++++.+
T Consensus 157 ~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v--~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~d 234 (910)
T KOG1539|consen 157 VEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVV--YTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFD 234 (910)
T ss_pred ccCCceeeEecchhheeeEEEeecCCcEEEEEeccCcEE--EEecccccceeEeccCCcceEEEEeccCceEEEEEcccC
Confidence 34455333344442 57899999999999999999864 578888899999999998899999999999999999999
Q ss_pred eEEEEEecCCCCeEEEEe--CCc-eeeeccCCCeEEEEECCCCCc-----------------------------------
Q psy10114 588 KQVHKLVGHTARVGALAW--NGD-MLSSGSRDRMILQRDVRTPNS----------------------------------- 629 (819)
Q Consensus 588 k~i~tl~gHs~~V~sLaw--ng~-~LaSGS~DGtI~IWDi~t~~~----------------------------------- 629 (819)
+.+.+++...++|++++| ||+ .+++|+..|.+.+||++....
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~ 314 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV 314 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence 999999977799999999 565 778888889999999875300
Q ss_pred --------------------------------------------------------------------------------
Q psy10114 630 -------------------------------------------------------------------------------- 629 (819)
Q Consensus 630 -------------------------------------------------------------------------------- 629 (819)
T Consensus 315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k 394 (910)
T KOG1539|consen 315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLK 394 (910)
T ss_pred EEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhc
Confidence
Q ss_pred -cceEE--------------E-----------------------eccc------CCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 630 -QSERR--------------L-----------------------VGHR------QEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 630 -~~v~~--------------l-----------------------~gH~------~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
..+.. . -.+. ..+++++.++-|++.+.|+..|.|-+
T Consensus 395 ~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~ 474 (910)
T KOG1539|consen 395 LPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDR 474 (910)
T ss_pred CCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEE
Confidence 00000 0 0011 35678888899999999999999999
Q ss_pred EECCCCceeEEE---ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEE
Q psy10114 666 WNLHSMSPLQTY---TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 666 WDl~t~~~i~t~---~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Las 742 (819)
|++++|-...+| ..|..+|++++...-++.++++| .+|.+++||..+...+..++.+..+..+..+.....+++
T Consensus 475 fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~---~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~ 551 (910)
T KOG1539|consen 475 FNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAG---ADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAI 551 (910)
T ss_pred EEcccCeeecccccCccccCceeEEEecCCCceEEEcc---CcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhh
Confidence 999999888888 48999999999998887565554 799999999999999999999999999999999888888
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
+.+|-.|+++|..+.+.+..+.||.++|++++|||||+.|++++.|++||+||+-++...
T Consensus 552 --~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 552 --ALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI 611 (910)
T ss_pred --hcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence 678999999999999999999999999999999999999999999999999999988754
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-21 Score=210.97 Aligned_cols=262 Identities=23% Similarity=0.363 Sum_probs=219.3
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCceEE-EE-------------ec--cCCCCCeEEEEEcCCCCEEEEEecCceEEEe
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTR-LC-------------DL--SADGNSVTSVAWNERGNLVAVGTHHGYVQVW 582 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~-l~-------------~l--~~h~~~VtsLafSpdG~~LAsGs~DGtI~IW 582 (819)
+..+..+.++++.+++|.=|++.++...+ +. .. ..|...+.+++.++||++||+|+.|..|.||
T Consensus 150 ls~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~Iw 229 (479)
T KOG0299|consen 150 LSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQIW 229 (479)
T ss_pred eeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEEe
Confidence 34445689999999999999998876331 10 01 2677889999999999999999999999999
Q ss_pred ecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D 660 (819)
|.++.+.++.+.+|.+.|.+++| ..+.+++++.|++|++|+++... .+.++.+|.+.|.++.-..-++.+-+|+.|
T Consensus 230 ~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s--~vetlyGHqd~v~~IdaL~reR~vtVGgrD 307 (479)
T KOG0299|consen 230 DCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLS--YVETLYGHQDGVLGIDALSRERCVTVGGRD 307 (479)
T ss_pred cCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhH--HHHHHhCCccceeeechhcccceEEecccc
Confidence 99999999999999999999999 56799999999999999998754 567889999999999988888888888899
Q ss_pred CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--C-----------CCC
Q psy10114 661 NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--T-----------GSQ 727 (819)
Q Consensus 661 GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~-----------~s~ 727 (819)
+++++|++.. +....+.++.+.+.|++|-.+.+ +++|+ .||.|.+|++.+.+++.... | ...
T Consensus 308 rT~rlwKi~e-esqlifrg~~~sidcv~~In~~H--fvsGS--dnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~W 382 (479)
T KOG0299|consen 308 RTVRLWKIPE-ESQLIFRGGEGSIDCVAFINDEH--FVSGS--DNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFW 382 (479)
T ss_pred ceeEEEeccc-cceeeeeCCCCCeeeEEEecccc--eeecc--CCceEEEeeecccCceeEeeccccccCCccccccccc
Confidence 9999999943 44556778999999999998776 55654 99999999999998876652 1 126
Q ss_pred eEEEEEccCCCEEEEEEecCCCeEEEEECCCC----cEEEEEecCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 728 VCNLAWSKHSSELVSTHGYSQNQILVWKYPTL----TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 728 V~sLafSpdg~~LastsGssDg~I~IWDl~s~----k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
|++++..|..+.+++ |+.+|.|++|.+..+ .++..+. -.+-|++++|+++|+.|++|.+.
T Consensus 383 itsla~i~~sdL~as--GS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGk 446 (479)
T KOG0299|consen 383 ITSLAVIPGSDLLAS--GSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGK 446 (479)
T ss_pred eeeeEecccCceEEe--cCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEeccc
Confidence 899999999999998 889999999999866 4445554 56789999999999977776543
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=204.15 Aligned_cols=281 Identities=19% Similarity=0.331 Sum_probs=234.3
Q ss_pred CCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec------
Q psy10114 511 QDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV------ 584 (819)
Q Consensus 511 ~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl------ 584 (819)
.|+.+-.+.+-....+.+++.|.+.+||.++++... .++.+|.+.|++++|++.+.++++++.|++-.||..
T Consensus 148 kDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL--~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~v 225 (481)
T KOG0300|consen 148 KDGIWHVAADSTQPICGTASADHTARIWSLESGACL--ATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEV 225 (481)
T ss_pred ccceeeehhhcCCcceeecccccceeEEeeccccce--eeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcC
Confidence 344444333333445778889999999999999864 478899999999999999999999999999999962
Q ss_pred CC--------c--------------------------eEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC
Q psy10114 585 SV--------A--------------------------KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 585 ~t--------g--------------------------k~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~ 628 (819)
.+ + .++..+.+|.+.|.+..| .|+.+++++.|++-.+||+++++
T Consensus 226 P~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge 305 (481)
T KOG0300|consen 226 PSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGE 305 (481)
T ss_pred CCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCc
Confidence 10 0 124567899999999999 68899999999999999999977
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
.+..+.||..+.+.++-+|..+++++++.|.+.++||.+.. ..+..|++|...|+++.|..+.+ +++|+ .|.+
T Consensus 306 --~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~--vVSgS--DDrT 379 (481)
T KOG0300|consen 306 --VVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDR--VVSGS--DDRT 379 (481)
T ss_pred --eeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCc--eeecC--CCce
Confidence 56889999999999999999999999999999999999843 45778999999999999998876 55554 9999
Q ss_pred EEEEECCCC-ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE-----EEecCCCCEEEEEEecCC
Q psy10114 708 IRFWNTLTG-QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA-----KLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 708 IrIWDl~tg-~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~-----sl~gH~~~VtsLafSpDG 781 (819)
|++||+++. .++.++..+++++.++.+..+..++. -.++.+|++||+... .+. .-++|..-|+|++|..+-
T Consensus 380 vKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAi--PhDNRqvRlfDlnG~-RlaRlPrtsRqgHrRMV~c~AW~eeh 456 (481)
T KOG0300|consen 380 VKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAI--PHDNRQVRLFDLNGN-RLARLPRTSRQGHRRMVTCCAWLEEH 456 (481)
T ss_pred EEEeeeccccCcceeeecCCccceeEeecCCceEEe--ccCCceEEEEecCCC-ccccCCcccccccceeeeeeeccccC
Confidence 999999885 57888899999999999999988888 668899999998643 333 345899999999998653
Q ss_pred --CEEEEEeCCCcEEEEECCCCc
Q psy10114 782 --EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 782 --~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.-|++++.|..+.-|++....
T Consensus 457 p~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 457 PACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred cccccccccccceeeeeEecccC
Confidence 357899999999999987653
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-21 Score=208.94 Aligned_cols=266 Identities=21% Similarity=0.322 Sum_probs=212.6
Q ss_pred CeEEEEEcCCCceEEEEeccCC-CCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecCCCCeEEEEe--CCc
Q psy10114 533 SCVYLWSACTSQVTRLCDLSAD-GNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGD 608 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h-~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~ 608 (819)
.++.+||+.+|...- ++.+. ...-.++..- .+.+++++. ....+.+|.+..........--.+.|.+++- +|.
T Consensus 18 ~~~~~~dl~TGt~~~--~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~ 94 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLL--QYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGY 94 (476)
T ss_pred cceeEEecCCCceeE--EecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCce
Confidence 458899999986543 34332 1111122211 234565554 4467999999876665544445778999988 477
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC---------CCceeEEEec
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH---------SMSPLQTYTE 679 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~---------t~~~i~t~~~ 679 (819)
+|+.|+..|.|++|.+.++.. +..+.+|-+.|+++.|+-||.+|++||.||.|.+|++. +-++...|..
T Consensus 95 ~l~ag~i~g~lYlWelssG~L--L~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~ 172 (476)
T KOG0646|consen 95 FLLAGTISGNLYLWELSSGIL--LNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSD 172 (476)
T ss_pred EEEeecccCcEEEEEeccccH--HHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeecc
Confidence 888888999999999999874 45668999999999999999999999999999999873 3467889999
Q ss_pred CCCCEEEEEEcCCC-CeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 680 HLAAVKAIAWSPHH-HGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 680 h~~~VtsLafSPdg-~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
|.-+|+++...+.| ...+.+.+ .|.++++||+..|..+.++..+..+.+++.+|.++.+++ |.++|.|.+.++..
T Consensus 173 HtlsITDl~ig~Gg~~~rl~TaS--~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yi--Gt~~G~I~~~~~~~ 248 (476)
T KOG0646|consen 173 HTLSITDLQIGSGGTNARLYTAS--EDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYI--GTEEGKIFQNLLFK 248 (476)
T ss_pred CcceeEEEEecCCCccceEEEec--CCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEe--cCCcceEEeeehhc
Confidence 99999999987763 22344444 899999999999999999999999999999999999999 99999999988643
Q ss_pred ----------------CcEEEEEecCCC--CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 759 ----------------LTQVAKLTGHSY--RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 759 ----------------~k~l~sl~gH~~--~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+.++..+.||.+ .|+|++++-||..|++|+.||.|++||+.+++.....
T Consensus 249 ~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl 315 (476)
T KOG0646|consen 249 LSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTL 315 (476)
T ss_pred CCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHH
Confidence 234567789988 9999999999999999999999999999998765443
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.4e-22 Score=210.18 Aligned_cols=278 Identities=17% Similarity=0.251 Sum_probs=213.3
Q ss_pred cCCcceEEEEEecC-CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce
Q psy10114 510 LQDDFYLNLVDWSS-QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK 588 (819)
Q Consensus 510 l~dDfyv~~ldwS~-~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk 588 (819)
.+|+.++.+-.... ..+++|+.||.|++||+.+.+.. ..+..|.+.|..+++.. ..+++++.|.+|+.|.++- .
T Consensus 65 HrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~--~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~ 139 (433)
T KOG0268|consen 65 HRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECI--RTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG-P 139 (433)
T ss_pred cccccchhhcCcchhhhhhccccCceEEEEehhhhhhh--heeecccCceeeEEecc--cceEEecCCcceeeeeccC-C
Confidence 34444443333332 46899999999999999876654 36788999999999987 5678889999999999765 3
Q ss_pred EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEE
Q psy10114 589 QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYV 665 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~I 665 (819)
.++++.+ ...+..+.- .++.++++|. .|.|||..... ++..+.-..+.|.++.|+|.. ..|++|+.|+.|.+
T Consensus 140 p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~--Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL 214 (433)
T KOG0268|consen 140 PLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDN--PVSSMSWGADSISSVKFNPVETSILASCASDRSIVL 214 (433)
T ss_pred cceeeec-cccccccccccccccccccCc--eeeecccccCC--ccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence 5555544 233444444 3567888776 48899997655 456666677889999999954 57788889999999
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEE-cCCCCeEEEEEccCCCEEEEE
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCV-DTGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l-~~~s~V~sLafSpdg~~Last 743 (819)
||++.+++++...- .-.-+.|+|+| ....+++++ .|.+++.+|++.-+ ++... ++.+.|.++.|||.|+++++
T Consensus 215 yD~R~~~Pl~KVi~-~mRTN~IswnP-eafnF~~a~--ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvs- 289 (433)
T KOG0268|consen 215 YDLRQASPLKKVIL-TMRTNTICWNP-EAFNFVAAN--EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVS- 289 (433)
T ss_pred EecccCCccceeee-eccccceecCc-cccceeecc--ccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcc-
Confidence 99999999877652 33457899999 555666655 99999999998743 33333 67889999999999999999
Q ss_pred EecCCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
|+-|.+|+||..+.+..--... .--..|.++.||-|.+++++||.|+.||+|.....++
T Consensus 290 -gsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 290 -GSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred -ccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence 8899999999998765433221 1134699999999999999999999999999876544
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-21 Score=214.44 Aligned_cols=237 Identities=25% Similarity=0.474 Sum_probs=205.4
Q ss_pred cceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccC-CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE
Q psy10114 513 DFYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSA-DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 513 Dfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~-h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
..++.++.|+ ++.|++|..+|.|.|||..+.+..+ .+.+ |...|-+++|+ +..+.+|+.||.|..+|+...+.
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~--~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~ 292 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTR--TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQH 292 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccc--cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchh
Confidence 4566777777 6789999999999999998776544 5666 89999999999 77899999999999999988766
Q ss_pred EEE-EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEE--CCCeE
Q psy10114 590 VHK-LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGG--NDNRL 663 (819)
Q Consensus 590 i~t-l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS--~DGtI 663 (819)
... +.+|...|..++| ++.++++|+.|+.+.|||....+ ....+..|...|.+++|+| ....||+|+ .|++|
T Consensus 293 ~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~--p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i 370 (484)
T KOG0305|consen 293 VVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE--PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCI 370 (484)
T ss_pred hhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc--ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEE
Confidence 555 8899999999999 67899999999999999996644 5688999999999999999 677899875 59999
Q ss_pred EEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEE
Q psy10114 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~Las 742 (819)
++||..+++.+.... ..+.|..+.|++..+.++++. |..++.|.+|+..+.+.+..+ .|...|..++++|||..+++
T Consensus 371 ~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sth-G~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t 448 (484)
T KOG0305|consen 371 KFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTH-GYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVT 448 (484)
T ss_pred EEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEec-CCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEE
Confidence 999999999888775 568899999999998888776 578889999999987777666 57788999999999999999
Q ss_pred EEecCCCeEEEEECCCC
Q psy10114 743 THGYSQNQILVWKYPTL 759 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~ 759 (819)
|..|.++++|++-..
T Consensus 449 --~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 449 --GAADETLRFWNLFDE 463 (484)
T ss_pred --ecccCcEEeccccCC
Confidence 778999999998654
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-19 Score=180.43 Aligned_cols=280 Identities=19% Similarity=0.257 Sum_probs=218.4
Q ss_pred CcceEEEEEecC--CeEEEEECCCeEEEEEcC------CC-------ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC
Q psy10114 512 DDFYLNLVDWSS--QNVLSVGLGSCVYLWSAC------TS-------QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576 (819)
Q Consensus 512 dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~------tg-------~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D 576 (819)
+.-.+.+++|.+ ...+.|+...+.+|.... .+ .......-+.|.+.|.|.+|+|+|.++|+|+.|
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd 110 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND 110 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence 344566777774 455566666777766432 11 012223345688999999999999999999999
Q ss_pred ceEEEeecCCceE-----EEEEecCCCCeEEEEe-C-----Cceeeecc-CCCeEEEEECCCCCccceEEEecccCCeEE
Q psy10114 577 GYVQVWDVSVAKQ-----VHKLVGHTARVGALAW-N-----GDMLSSGS-RDRMILQRDVRTPNSQSERRLVGHRQEVCG 644 (819)
Q Consensus 577 GtI~IWDl~tgk~-----i~tl~gHs~~V~sLaw-n-----g~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~~~Vts 644 (819)
.+|++.-.+...+ -..+.-|.+.|..++| + +.+|++++ .|..|++-|...++ ....+.+|++.|.+
T Consensus 111 k~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~--~~~a~sghtghila 188 (350)
T KOG0641|consen 111 KTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ--GFHALSGHTGHILA 188 (350)
T ss_pred ceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC--cceeecCCcccEEE
Confidence 9999976653322 2456789999999999 1 33666655 46677777776655 55889999999988
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCCceeEEEec-------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 645 LKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE-------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 645 LafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~-------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
+- +-+|-.+++|++|.+|++||++-..++.++.. ...+|.+++..|.|+ ++++|- .|....+||++.++
T Consensus 189 ly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr-ll~sg~--~dssc~lydirg~r 264 (350)
T KOG0641|consen 189 LY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR-LLASGH--ADSSCMLYDIRGGR 264 (350)
T ss_pred EE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc-eeeecc--CCCceEEEEeeCCc
Confidence 73 34688999999999999999998888877652 236799999999998 666654 99999999999999
Q ss_pred eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC----CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCc
Q psy10114 718 PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT----LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDET 792 (819)
Q Consensus 718 ~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s----~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGt 792 (819)
.++.+ .+...|.++.|+|...++++ ++.|..|++-|+.. .-++.....|...+..+.|+|+.-.+++.+.|.+
T Consensus 265 ~iq~f~phsadir~vrfsp~a~yllt--~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt 342 (350)
T KOG0641|consen 265 MIQRFHPHSADIRCVRFSPGAHYLLT--CSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKT 342 (350)
T ss_pred eeeeeCCCccceeEEEeCCCceEEEE--ecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcce
Confidence 99988 56788999999999999999 78999999999852 1234455679999999999999989999999999
Q ss_pred EEEEECC
Q psy10114 793 LRFWNVF 799 (819)
Q Consensus 793 IrIWdl~ 799 (819)
+.+|-+.
T Consensus 343 ~tlwa~~ 349 (350)
T KOG0641|consen 343 ATLWALN 349 (350)
T ss_pred EEEeccC
Confidence 9999764
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=218.80 Aligned_cols=237 Identities=19% Similarity=0.353 Sum_probs=206.2
Q ss_pred EEEEc-CCCCEEEEEecCceEEEeecCCce------EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc
Q psy10114 560 SVAWN-ERGNLVAVGTHHGYVQVWDVSVAK------QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 560 sLafS-pdG~~LAsGs~DGtI~IWDl~tgk------~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
++..+ |.+++|++|+.||.|++|+..... .+.+++.|...|..++. +++.|+|+|.|-+|++|+.......
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~ 108 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF 108 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence 34444 456789999999999999986432 47788899999999888 6779999999999999999887555
Q ss_pred ceEEEecccCCeEEEEE-CCCCCEEEEEECCCeEEEEECCCCc--eeE--------EEe-cCCCCEEEEEEcCCCCeEEE
Q psy10114 631 SERRLVGHRQEVCGLKW-SPDNQYLASGGNDNRLYVWNLHSMS--PLQ--------TYT-EHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLaf-Spdg~~LaSGS~DGtI~IWDl~t~~--~i~--------t~~-~h~~~VtsLafSPdg~~LLa 698 (819)
...++..|.+-|.|++. -++...+|+||-|+.|.+||+.++. .+. .+. ++..+|.+++.++.| .+++
T Consensus 109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~-t~iv 187 (735)
T KOG0308|consen 109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG-TIIV 187 (735)
T ss_pred hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc-eEEE
Confidence 67788999999999999 7788899999999999999999772 222 222 788899999999998 4677
Q ss_pred EEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 699 SGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
+|| ..+.+++||.++++.+..+ .|...|..+..++||..+++ +++||+|++||+...++++++..|...|.++..
T Consensus 188 sGg--tek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls--~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~ 263 (735)
T KOG0308|consen 188 SGG--TEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLS--ASSDGTIRLWDLGQQRCLATYIVHKEGVWALQS 263 (735)
T ss_pred ecC--cccceEEeccccccceeeeeccccceEEEEEcCCCCeEee--cCCCceEEeeeccccceeeeEEeccCceEEEee
Confidence 765 8999999999999887776 56788999999999999999 889999999999999999999999999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 778 SPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 778 SpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+|+=+.+.+|+.||.|..=|+.+.
T Consensus 264 ~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 264 SPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred CCCcceEEecCCCCcEEecccCCc
Confidence 999999999999999999998874
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.2e-21 Score=208.27 Aligned_cols=232 Identities=22% Similarity=0.451 Sum_probs=191.4
Q ss_pred CCeEEEEECCCeEEEEEcCCCce--------EEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCce-----
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQV--------TRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAK----- 588 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~--------~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk----- 588 (819)
+..+++.+.++.|+|||.....- ..-..+.+|.+.-.+++|++.. -.|++|+.|++|++||+....
T Consensus 137 p~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~ 216 (422)
T KOG0264|consen 137 PNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKV 216 (422)
T ss_pred CcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCcc
Confidence 34566777889999999864322 1223567888878889999854 588999999999999997542
Q ss_pred --EEEEEecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCe
Q psy10114 589 --QVHKLVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNR 662 (819)
Q Consensus 589 --~i~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGt 662 (819)
....+.+|+..|..++| +.+.+++++.|+.+.+||.|++.........+|.++|.|++|+| ++..||+||.|++
T Consensus 217 ~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t 296 (422)
T KOG0264|consen 217 VDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT 296 (422)
T ss_pred ccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCc
Confidence 34567899999999999 57899999999999999999754455677889999999999999 6678999999999
Q ss_pred EEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE------------EE---cCCC
Q psy10114 663 LYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ------------CV---DTGS 726 (819)
Q Consensus 663 I~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~------------~l---~~~s 726 (819)
|.+||+|+. +++.++.+|...|.++.|+|+...+++++| .|+.+.+||+..-...+ .+ .|..
T Consensus 297 V~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg--~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~ 374 (422)
T KOG0264|consen 297 VALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSG--TDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTA 374 (422)
T ss_pred EEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecc--cCCcEEEEeccccccccChhhhccCCcceeEEecCccc
Confidence 999999975 478899999999999999999999999987 99999999997522111 12 3556
Q ss_pred CeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
.|..+.|+|+....++. ..+|+.+.||+..
T Consensus 375 kV~DfsWnp~ePW~I~S-vaeDN~LqIW~~s 404 (422)
T KOG0264|consen 375 KVSDFSWNPNEPWTIAS-VAEDNILQIWQMA 404 (422)
T ss_pred ccccccCCCCCCeEEEE-ecCCceEEEeecc
Confidence 79999999999988875 5689999999975
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-21 Score=195.36 Aligned_cols=236 Identities=22% Similarity=0.410 Sum_probs=195.3
Q ss_pred EEEecCCeEEEEECCCeEEEEEcCCCce-EEEEeccCCCCCeEEEEEcC--CCCEEEEEecCceEEEeecCCce--EEEE
Q psy10114 518 LVDWSSQNVLSVGLGSCVYLWSACTSQV-TRLCDLSADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVSVAK--QVHK 592 (819)
Q Consensus 518 ~ldwS~~~LLa~g~Dg~V~LWd~~tg~~-~~l~~l~~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~tgk--~i~t 592 (819)
.+++.+.++++++.|+.|+|+...++.. ..+.++.+|+++|..++|.. .|.+||+++.||.|.||.-++++ +...
T Consensus 18 ~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e 97 (299)
T KOG1332|consen 18 QLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYE 97 (299)
T ss_pred hhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhh
Confidence 3567899999999999999999977654 67789999999999999976 89999999999999999988874 3445
Q ss_pred EecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCC-CccceEEEecccCCeEEEEECCC---C-----------CE
Q psy10114 593 LVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTP-NSQSERRLVGHRQEVCGLKWSPD---N-----------QY 653 (819)
Q Consensus 593 l~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~-~~~~v~~l~gH~~~VtsLafSpd---g-----------~~ 653 (819)
...|.+.|++++|- |-.|++++.||.|.+.+.+.. ..........|...|++++|.|. | +.
T Consensus 98 ~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~kr 177 (299)
T KOG1332|consen 98 HAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKR 177 (299)
T ss_pred hhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccce
Confidence 66899999999993 558999999999999999876 33344556789999999999985 4 57
Q ss_pred EEEEECCCeEEEEECCCCc--eeEEEecCCCCEEEEEEcCCC---CeEEEEEccCCCCeEEEEECCCCce--eEEE--cC
Q psy10114 654 LASGGNDNRLYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHH---HGLLASGGGTADRCIRFWNTLTGQP--MQCV--DT 724 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg---~~LLaSGgGs~DgtIrIWDl~tg~~--v~~l--~~ 724 (819)
|++|+.|+.|+||+..+++ .-+++.+|.+-|+.++|.|.- +..+++++ +||++.||-.+.... ..++ +.
T Consensus 178 lvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~S--qDg~viIwt~~~e~e~wk~tll~~f 255 (299)
T KOG1332|consen 178 LVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCS--QDGTVIIWTKDEEYEPWKKTLLEEF 255 (299)
T ss_pred eeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEec--CCCcEEEEEecCccCcccccccccC
Confidence 9999999999999998753 345588999999999999964 44567766 999999998763211 1122 24
Q ss_pred CCCeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 725 GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 725 ~s~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
...+..+.||..|+.|++ ++.|+.|.+|.-.
T Consensus 256 ~~~~w~vSWS~sGn~LaV--s~GdNkvtlwke~ 286 (299)
T KOG1332|consen 256 PDVVWRVSWSLSGNILAV--SGGDNKVTLWKEN 286 (299)
T ss_pred CcceEEEEEeccccEEEE--ecCCcEEEEEEeC
Confidence 567999999999999999 6779999999854
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-20 Score=215.90 Aligned_cols=244 Identities=19% Similarity=0.298 Sum_probs=210.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc-eEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccc
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA-KQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg-k~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~ 631 (819)
.|....+.++|.++|..|++++.||.|++|+.... +...++..+...|.+++-.++.|++|+.+++|.++.+..++..
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~- 89 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEED- 89 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCcc-
Confidence 57778999999999999999999999999998766 4555555588899999999999999999999999999887643
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
..+....-++.+++++.+|+++|.||.|-.|++-+..+......+.+|.++|.++.|+|++..++++. -||.|++|
T Consensus 90 -~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss---~dG~v~iw 165 (933)
T KOG1274|consen 90 -TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSS---CDGKVQIW 165 (933)
T ss_pred -ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEe---cCceEEEE
Confidence 33444557899999999999999999999999999999999999999999999999999999776665 59999999
Q ss_pred ECCCCceeEEEc---------CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEecC
Q psy10114 712 NTLTGQPMQCVD---------TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSPD 780 (819)
Q Consensus 712 Dl~tg~~v~~l~---------~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSpD 780 (819)
|+.++.+...+. ....++.++|+|+|..+++ -..|+.|++|+..++.....+.. +...+.+++|+|+
T Consensus 166 ~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~--~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn 243 (933)
T KOG1274|consen 166 DLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV--PPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN 243 (933)
T ss_pred EcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe--eccCCeEEEEccCCceeheeecccccccceEEEEEcCC
Confidence 999988766552 1244678999999888888 56899999999999999888864 3445999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCce
Q psy10114 781 GEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
|+|||+++.||.|.|||+++-++
T Consensus 244 G~YiAAs~~~g~I~vWnv~t~~~ 266 (933)
T KOG1274|consen 244 GKYIAASTLDGQILVWNVDTHER 266 (933)
T ss_pred CcEEeeeccCCcEEEEecccchh
Confidence 99999999999999999996433
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-21 Score=208.56 Aligned_cols=289 Identities=22% Similarity=0.285 Sum_probs=227.8
Q ss_pred CCceeecCCCcCCcceEEEEEecC--CeEEEEECCCeEEEEEcCCCc-eEEE--EeccCCCCCeEEEEEcCCCCEEEEEe
Q psy10114 500 IPFKVLDAPELQDDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQ-VTRL--CDLSADGNSVTSVAWNERGNLVAVGT 574 (819)
Q Consensus 500 ~P~kvLdap~l~dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~-~~~l--~~l~~h~~~VtsLafSpdG~~LAsGs 574 (819)
+|.+....-.+.+.-.|.++.-++ ..+.+| ..|+|+|||+.... ...+ .+.......|+++...+||+.|++|+
T Consensus 406 IPrharq~~tL~HGEvVcAvtIS~~trhVyTg-GkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGG 484 (705)
T KOG0639|consen 406 IPRHARQINTLAHGEVVCAVTISNPTRHVYTG-GKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGG 484 (705)
T ss_pred CCchHHhhhhhccCcEEEEEEecCCcceeEec-CCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecc
Confidence 333333334455566677777774 345555 45899999986432 1111 12223467899999999999999999
Q ss_pred cCceEEEeecCCceEE--EEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 575 HHGYVQVWDVSVAKQV--HKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 575 ~DGtI~IWDl~tgk~i--~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
.-.++.|||+...... ..+..-...+.+++. +.+..+++..||.|.|||+.+.. .++.+.+|.+.+.|+..++|
T Consensus 485 eastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~--~VrqfqGhtDGascIdis~d 562 (705)
T KOG0639|consen 485 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISKD 562 (705)
T ss_pred ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce--eeecccCCCCCceeEEecCC
Confidence 9999999999865433 233332334455555 56689999999999999999854 57899999999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEE
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN 730 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~s 730 (819)
|..|-+|+-|++|+.||+++++.++... ....|.++..+|.+..+++ |-.++.+.+-.....+..+.-.+.+-|.+
T Consensus 563 GtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlav---GMens~vevlh~skp~kyqlhlheScVLS 638 (705)
T KOG0639|consen 563 GTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAV---GMENSNVEVLHTSKPEKYQLHLHESCVLS 638 (705)
T ss_pred CceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCccceee---ecccCcEEEEecCCccceeecccccEEEE
Confidence 9999999999999999999988766543 4678999999999997766 34788888888776666666678889999
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
+.|.+.|+.+++ .+.|+-+..|..+-|..+...+ ....|+++.+|.|.++|+||++|..-.+|.+
T Consensus 639 lKFa~cGkwfvS--tGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 639 LKFAYCGKWFVS--TGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred EEecccCceeee--cCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 999999999999 5689999999999999887776 4567999999999999999999999888876
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=195.55 Aligned_cols=243 Identities=21% Similarity=0.318 Sum_probs=195.6
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCC-ceEE-EEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 553 ADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSV-AKQV-HKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 553 ~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~t-gk~i-~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
..++.|.+++||| ...+++.|+.||+|++|+++. |..+ +....|.++|.+++| +|..+++|+.|+.+++||+.++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 3468999999999 566777999999999999987 3332 445579999999999 5889999999999999999997
Q ss_pred CccceEEEecccCCeEEEEECCCCC--EEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQ--YLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~--~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
+ ......|...|.++.|-+... .|++||.|.+|+.||.+...++.++. -...+.++..-. . +++.+. .+
T Consensus 105 Q---~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~--p-m~vVat--a~ 175 (347)
T KOG0647|consen 105 Q---VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLY--P-MAVVAT--AE 175 (347)
T ss_pred C---eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccC--c-eeEEEe--cC
Confidence 5 367788999999999987655 89999999999999999999988876 355666655432 2 344432 79
Q ss_pred CeEEEEECCCCceeEEE---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC--cEEEEEecCC---------CC
Q psy10114 706 RCIRFWNTLTGQPMQCV---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL--TQVAKLTGHS---------YR 771 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~--k~l~sl~gH~---------~~ 771 (819)
+.|.+|+++++...... ...-++.+++..+|.+..+. |+-+|.+.+..+..+ +.-.+++.|. ..
T Consensus 176 r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~al--GsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYa 253 (347)
T KOG0647|consen 176 RHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFAL--GSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYA 253 (347)
T ss_pred CcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEe--eeecceEEEEecCCCCccCceeEEEeccCCCCCCceEE
Confidence 99999999876543222 23567899999898888877 889999999998876 5555666665 25
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 772 VLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
|++++|+|.-..|+|++.||++.+||-....+.+.
T Consensus 254 VNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~ 288 (347)
T KOG0647|consen 254 VNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKT 288 (347)
T ss_pred ecceEeecccceEEEecCCceEEEecchhhhhhhc
Confidence 88899999999999999999999999877665443
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.3e-20 Score=188.14 Aligned_cols=235 Identities=19% Similarity=0.284 Sum_probs=204.3
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
-+.+|+.+++.+.++.+|.+|++++.|.+..+|-..+|+.+-++.||++.|+|++. +.+.+++|+.|.++++||+.++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 36789999999999999999999999999999999999999999999999999887 5779999999999999999998
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECC-------CCceeEEEecCCCCEEEEEEcCCCCe
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLH-------SMSPLQTYTEHLAAVKAIAWSPHHHG 695 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~-------t~~~i~t~~~h~~~VtsLafSPdg~~ 695 (819)
+.. ..++ -...|..+.|+++|++++.+.++ +.|.++|++ +.+|...+..+...++.+-|.|-++.
T Consensus 85 k~l--a~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ 161 (327)
T KOG0643|consen 85 KQL--ATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGET 161 (327)
T ss_pred cEE--EEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCE
Confidence 743 3333 45789999999999988877654 569999998 45678888888899999999999997
Q ss_pred EEEEEccCCCCeEEEEECCCCceeEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEE
Q psy10114 696 LLASGGGTADRCIRFWNTLTGQPMQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL 773 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vt 773 (819)
+++. ..||.|..||.++|+..... .|.+.|+.+++++|..++++ |+.|.+-++||..+.+.++++. -..+|+
T Consensus 162 ii~G---he~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT--~s~Dttakl~D~~tl~v~Kty~-te~PvN 235 (327)
T KOG0643|consen 162 IIAG---HEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT--GSKDTTAKLVDVRTLEVLKTYT-TERPVN 235 (327)
T ss_pred EEEe---cCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEe--cccCccceeeeccceeeEEEee-eccccc
Confidence 7763 38999999999998665444 46789999999999999999 8899999999999999998887 457899
Q ss_pred EEEEecCCCEEEEEeCCCcE
Q psy10114 774 YLAMSPDGEAIVTGAGDETL 793 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DGtI 793 (819)
+.+++|....++.|++....
T Consensus 236 ~aaisP~~d~VilgGGqeA~ 255 (327)
T KOG0643|consen 236 TAAISPLLDHVILGGGQEAM 255 (327)
T ss_pred ceecccccceEEecCCceee
Confidence 99999988888887765543
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-20 Score=191.46 Aligned_cols=261 Identities=17% Similarity=0.254 Sum_probs=203.4
Q ss_pred EEEEEecC--C-eEEEEECCCeEEEEEcCC-CceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 516 LNLVDWSS--Q-NVLSVGLGSCVYLWSACT-SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 516 v~~ldwS~--~-~LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
+..++||+ . .+++++.|++|++|+++. |.... .....|.++|.+++|+.||..+++|+.|+.+++||+.++ ++.
T Consensus 30 IS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~ 107 (347)
T KOG0647|consen 30 ISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVS 107 (347)
T ss_pred hheeEeccccCceEEecccCCceEEEEEecCCcccc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-Cee
Confidence 55566665 3 455889999999999987 34433 345568899999999999999999999999999999999 677
Q ss_pred EEecCCCCeEEEEe--C--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 592 KLVGHTARVGALAW--N--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~gHs~~V~sLaw--n--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
++..|.++|.++.| . -..|++||.|++|+.||.+..... .++. -.+.+.++.. ....++++..+..|.+|+
T Consensus 108 ~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv--~t~~-LPeRvYa~Dv--~~pm~vVata~r~i~vyn 182 (347)
T KOG0647|consen 108 QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPV--ATLQ-LPERVYAADV--LYPMAVVATAERHIAVYN 182 (347)
T ss_pred eeeecccceeEEEEecCCCcceeEecccccceeecccCCCCee--eeee-ccceeeehhc--cCceeEEEecCCcEEEEE
Confidence 78899999999999 2 237899999999999999986532 3332 3455666554 345788899999999999
Q ss_pred CCCCceeEEE--ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE--EE---c----CC---CCeEEEEE
Q psy10114 668 LHSMSPLQTY--TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ--CV---D----TG---SQVCNLAW 733 (819)
Q Consensus 668 l~t~~~i~t~--~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~--~l---~----~~---s~V~sLaf 733 (819)
++++.....- ..-+-.+++++..+++... +.|+ .+|.+-+..+..+.+.. .+ . .. -.|.+++|
T Consensus 183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~~~-alGs--iEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~F 259 (347)
T KOG0647|consen 183 LENPPTEFKRIESPLKWQTRCVACFQDKDGF-ALGS--IEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAF 259 (347)
T ss_pred cCCCcchhhhhcCcccceeeEEEEEecCCce-Eeee--ecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEe
Confidence 9776432211 1224568899998888866 4444 89999999888763321 22 1 11 24788999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS 788 (819)
+|....+++ .++||.+.+||-....++.+.+.|..+|++.+|+.+|.++|-+.
T Consensus 260 hP~hgtlvT--aGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 260 HPVHGTLVT--AGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred ecccceEEE--ecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 999999999 56899999999998889999999999999999999999988653
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=197.12 Aligned_cols=247 Identities=19% Similarity=0.309 Sum_probs=220.0
Q ss_pred eccCCCCCeEEEEEcC---CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCc--eeeeccCCCeEEEEEC
Q psy10114 550 DLSADGNSVTSVAWNE---RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGD--MLSSGSRDRMILQRDV 624 (819)
Q Consensus 550 ~l~~h~~~VtsLafSp---dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~--~LaSGS~DGtI~IWDi 624 (819)
...+|..+|..++||| +|-+|++++.||.-.+-+-++|.-+-++.||.+.|++...|.+ ..++++.|-+-++||.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a 88 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA 88 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence 3468999999999985 8899999999999988899999999999999999999999655 6788899999999999
Q ss_pred CCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-eeEEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-PLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
-++... . ...|..-|.+++|+.|.++|++|+.+..++|||++..+ +...+.+|.+.|+.+.|....+.++.+.
T Consensus 89 ~tgdel--h-sf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSa--- 162 (334)
T KOG0278|consen 89 VTGDEL--H-SFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSA--- 162 (334)
T ss_pred hhhhhh--h-hhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeec---
Confidence 887632 2 34588889999999999999999999999999997654 6778899999999999999888888763
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~ 783 (819)
.|++||+||.+++..++++...++|+++..+++|+++.++. .+.|.+||..+...++.... ...|.+.+.+|+...
T Consensus 163 dd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~---gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~ 238 (334)
T KOG0278|consen 163 DDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAY---GSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEF 238 (334)
T ss_pred cCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEec---CceeEEeccccccceeeccC-ccccccccccCCCce
Confidence 89999999999999999999999999999999999998854 47899999999999988763 456899999999999
Q ss_pred EEEEeCCCcEEEEECCCCceecc
Q psy10114 784 IVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
++.|+.|..++.||..+++....
T Consensus 239 fVaGged~~~~kfDy~TgeEi~~ 261 (334)
T KOG0278|consen 239 FVAGGEDFKVYKFDYNTGEEIGS 261 (334)
T ss_pred EEecCcceEEEEEeccCCceeee
Confidence 99999999999999999987655
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=202.47 Aligned_cols=247 Identities=24% Similarity=0.400 Sum_probs=211.3
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE----E-------------E-ecCCCCeEEEEe--CCce
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH----K-------------L-VGHTARVGALAW--NGDM 609 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~----t-------------l-~gHs~~V~sLaw--ng~~ 609 (819)
....|.-+|+++++++++++.++++.||+|.=|++.+++..+ + - ++|...+.+++. +|.+
T Consensus 137 ~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky 216 (479)
T KOG0299|consen 137 VIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY 216 (479)
T ss_pred eeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence 345688899999999999999999999999999998876431 1 1 267788888888 6889
Q ss_pred eeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEE
Q psy10114 610 LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAW 689 (819)
Q Consensus 610 LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLaf 689 (819)
|++|+.|..|.|||.++.+ .+..+.+|.+.|.+++|-.....+++++.|.+|++|+++....+.++-+|++.|.+|..
T Consensus 217 latgg~d~~v~Iw~~~t~e--hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Ida 294 (479)
T KOG0299|consen 217 LATGGRDRHVQIWDCDTLE--HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDA 294 (479)
T ss_pred EEecCCCceEEEecCcccc--hhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeech
Confidence 9999999999999999976 45778999999999999988889999999999999999999999999999999999988
Q ss_pred cCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-cC
Q psy10114 690 SPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-GH 768 (819)
Q Consensus 690 SPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-gH 768 (819)
..-++ ++++|+ .|+++++|++.....+....+.+.+.+++|-.+ ..+++ |+++|.|.+|++.+.+++.+.. +|
T Consensus 295 L~reR-~vtVGg--rDrT~rlwKi~eesqlifrg~~~sidcv~~In~-~Hfvs--GSdnG~IaLWs~~KKkplf~~~~AH 368 (479)
T KOG0299|consen 295 LSRER-CVTVGG--RDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVS--GSDNGSIALWSLLKKKPLFTSRLAH 368 (479)
T ss_pred hcccc-eEEecc--ccceeEEEeccccceeeeeCCCCCeeeEEEecc-cceee--ccCCceEEEeeecccCceeEeeccc
Confidence 87665 666665 899999999976665555667778999998644 56777 9999999999999999987764 22
Q ss_pred -----------CCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 769 -----------SYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 769 -----------~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
...|++++..|...++++|+.+|.||+|.+.++-+.
T Consensus 369 gv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~ 415 (479)
T KOG0299|consen 369 GVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRA 415 (479)
T ss_pred cccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccc
Confidence 127899999999999999999999999999988543
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.1e-20 Score=192.28 Aligned_cols=243 Identities=18% Similarity=0.272 Sum_probs=198.9
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
++.|.++.|+|.++.|++++.||++++||+........+ .|..++.+.+| +...+++|+-||.|+.+|+.+++. .
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~---~ 88 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNE---D 88 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccCCceEEEeccCceEEEEEecCCcc---e
Confidence 688999999999999999999999999999887544444 48999999999 677999999999999999998663 5
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl 713 (819)
.+..|...|.|+..++....+++||.|++|++||.+.......+.. ...|.++... ++.|++ |. .|..+.+||+
T Consensus 89 ~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~--g~~LvV-g~--~~r~v~iyDL 162 (323)
T KOG1036|consen 89 QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVS--GNRLVV-GT--SDRKVLIYDL 162 (323)
T ss_pred eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEecc--CCEEEE-ee--cCceEEEEEc
Confidence 6788999999999999888999999999999999998666655553 3477777765 444555 32 7999999999
Q ss_pred CCCceeEEE---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC----cEEEEEecCC---------CCEEEEEE
Q psy10114 714 LTGQPMQCV---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL----TQVAKLTGHS---------YRVLYLAM 777 (819)
Q Consensus 714 ~tg~~v~~l---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~----k~l~sl~gH~---------~~VtsLaf 777 (819)
++....... ...-++.++++-|++.-.++ ++-||.|.+=.++.. +....++.|. .+|++++|
T Consensus 163 Rn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~--sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~F 240 (323)
T KOG1036|consen 163 RNLDEPFQRRESSLKYQTRCVALVPNGEGYVV--SSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAF 240 (323)
T ss_pred ccccchhhhccccceeEEEEEEEecCCCceEE--EeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEe
Confidence 986554322 33567899999998888888 778999888666544 4445666663 36999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCceeccccc
Q psy10114 778 SPDGEAIVTGAGDETLRFWNVFSKVRSQRESK 809 (819)
Q Consensus 778 SpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~~ 809 (819)
+|--++++||+.||.|.+||++++++..+..+
T Consensus 241 hp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~ 272 (323)
T KOG1036|consen 241 HPIHGTFATGGSDGIVNIWDLFNRKRLKQLAK 272 (323)
T ss_pred ccccceEEecCCCceEEEccCcchhhhhhccC
Confidence 99999999999999999999999988765543
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-18 Score=190.72 Aligned_cols=272 Identities=20% Similarity=0.322 Sum_probs=217.1
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEec-cC-CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDL-SA-DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l-~~-h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
+....|. +.+++.....+.++.|+.+++.+.+...+ +. ....|.|++|.++|+ +++|.++|.|.||+..+.+..+
T Consensus 203 v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k 281 (626)
T KOG2106|consen 203 VFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISK 281 (626)
T ss_pred EEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEe
Confidence 3444555 45677777779999999999887665443 22 247899999999986 5699999999999999888888
Q ss_pred EEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCC--------------------------------------ccce
Q psy10114 592 KLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPN--------------------------------------SQSE 632 (819)
Q Consensus 592 tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~--------------------------------------~~~v 632 (819)
+...|.+.|.+++. ....|++|+.|+.|..||-.-.+ ....
T Consensus 282 ~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~ 361 (626)
T KOG2106|consen 282 QVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFT 361 (626)
T ss_pred EeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCce
Confidence 88899999999999 34456669999999999832110 0111
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD 712 (819)
....+|.++..+++.+|+.+++++++.|+.+++|+ ..+++.+.. -..++.+++|+|.| .++.| +..|...+.|
T Consensus 362 ~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg--~va~G--t~~G~w~V~d 434 (626)
T KOG2106|consen 362 LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG--VVAVG--TATGRWFVLD 434 (626)
T ss_pred EEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc--eEEEe--eccceEEEEe
Confidence 23457888999999999999999999999999999 455554443 45778999999999 45554 4899999999
Q ss_pred CCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEEEe-cCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 713 TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 713 l~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
.++...+..-..+.+++.++|+|+|.++++ |+.|+.|.+|.+.. +....... .+..+|+.+.||+|++++.+-+.|
T Consensus 435 ~e~~~lv~~~~d~~~ls~v~ysp~G~~lAv--gs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d 512 (626)
T KOG2106|consen 435 TETQDLVTIHTDNEQLSVVRYSPDGAFLAV--GSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGD 512 (626)
T ss_pred cccceeEEEEecCCceEEEEEcCCCCEEEE--ecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCc
Confidence 999777766656889999999999999999 89999999999874 44443332 234789999999999999999999
Q ss_pred CcEEEEE
Q psy10114 791 ETLRFWN 797 (819)
Q Consensus 791 GtIrIWd 797 (819)
-.|.+|.
T Consensus 513 ~eiLyW~ 519 (626)
T KOG2106|consen 513 YEILYWK 519 (626)
T ss_pred eEEEEEc
Confidence 9999993
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-19 Score=177.46 Aligned_cols=241 Identities=21% Similarity=0.375 Sum_probs=202.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecC------Cc----e-----EEEEEecCCCCeEEEEe--CCceeeeccCC
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS------VA----K-----QVHKLVGHTARVGALAW--NGDMLSSGSRD 616 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~------tg----k-----~i~tl~gHs~~V~sLaw--ng~~LaSGS~D 616 (819)
....|.+++|+|.|.+.|+|+...+.+|-... .+ + ..+.-+.|.+.|.|.+| +|..+++|+.|
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd 110 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND 110 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence 46789999999999999999999999887432 11 1 12233468999999999 58899999999
Q ss_pred CeEEEEECCCCCcc---ceEEEecccCCeEEEEECC----CCCEEEEEE-CCCeEEEEECCCCceeEEEecCCCCEEEE-
Q psy10114 617 RMILQRDVRTPNSQ---SERRLVGHRQEVCGLKWSP----DNQYLASGG-NDNRLYVWNLHSMSPLQTYTEHLAAVKAI- 687 (819)
Q Consensus 617 GtI~IWDi~t~~~~---~v~~l~gH~~~VtsLafSp----dg~~LaSGS-~DGtI~IWDl~t~~~i~t~~~h~~~VtsL- 687 (819)
++|++......... ....+..|.+.|..++|-. .+..|++++ .|..|++-|...|+..+.+.+|.+-|.++
T Consensus 111 k~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilaly 190 (350)
T KOG0641|consen 111 KTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALY 190 (350)
T ss_pred ceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEE
Confidence 99999877654432 2356788999999999954 355777765 47789999999999999999999998876
Q ss_pred EEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC--------CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC
Q psy10114 688 AWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 688 afSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--------~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~ 759 (819)
.|+ ..++++|+ +|.+|++||++-..++..++. .+.|.+++..|.|+.+++ |..|....+||++.+
T Consensus 191 swn---~~m~~sgs--qdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~s--g~~dssc~lydirg~ 263 (350)
T KOG0641|consen 191 SWN---GAMFASGS--QDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLAS--GHADSSCMLYDIRGG 263 (350)
T ss_pred Eec---CcEEEccC--CCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeee--ccCCCceEEEEeeCC
Confidence 343 34777765 999999999999999888743 256999999999999999 889999999999999
Q ss_pred cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 760 k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+.++.+..|...|.++.|||...++++++.|..|++=|+...
T Consensus 264 r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 264 RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccc
Confidence 999999999999999999999999999999999999998753
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=216.14 Aligned_cols=240 Identities=23% Similarity=0.398 Sum_probs=202.4
Q ss_pred CeEEEEEcC-CCCEEEEEecCceEEEeecCC---ceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCc
Q psy10114 557 SVTSVAWNE-RGNLVAVGTHHGYVQVWDVSV---AKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNS 629 (819)
Q Consensus 557 ~VtsLafSp-dG~~LAsGs~DGtI~IWDl~t---gk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~ 629 (819)
.+..|+|.. +.++||+++..|.|.+||+.. .+.+..+..|+..+.++.|+ +++|++||.||+|++||++..+.
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S 168 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS 168 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc
Confidence 455688875 468999999999999999987 67777889999999999994 78999999999999999998764
Q ss_pred cceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 630 QSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
..++.+....|.+++|+| .+..++++.+.|.+++||++.. ++...+.+|.++|.++.|+|++. ++|+|| .|+.
T Consensus 169 --~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~-~lATGG--RDK~ 243 (839)
T KOG0269|consen 169 --KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNRE-WLATGG--RDKM 243 (839)
T ss_pred --cccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCc-eeeecC--CCcc
Confidence 466777888999999999 6789999999999999999865 56778899999999999999655 677776 9999
Q ss_pred EEEEECCCCc--eeEEEcCCCCeEEEEEccCCCEEEEE-EecCCCeEEEEECCC-CcEEEEEecCCCCEEEEEEec-CCC
Q psy10114 708 IRFWNTLTGQ--PMQCVDTGSQVCNLAWSKHSSELVST-HGYSQNQILVWKYPT-LTQVAKLTGHSYRVLYLAMSP-DGE 782 (819)
Q Consensus 708 IrIWDl~tg~--~v~~l~~~s~V~sLafSpdg~~Last-sGssDg~I~IWDl~s-~k~l~sl~gH~~~VtsLafSp-DG~ 782 (819)
|+|||+.+++ ...++.+..++..+.|-|...+.+++ +-..|-.|+|||++. .-+..++..|+..++.++|.. |-.
T Consensus 244 vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~ 323 (839)
T KOG0269|consen 244 VKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRI 323 (839)
T ss_pred EEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCce
Confidence 9999998654 56777889999999999988765543 334578899999974 566788899999999999965 556
Q ss_pred EEEEEeCCCcEEEEECCCC
Q psy10114 783 AIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 783 ~LaSGS~DGtIrIWdl~s~ 801 (819)
.+.+++.||+|..-.+++.
T Consensus 324 ~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 324 NLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred eeEeecCccHHHHhhhhcc
Confidence 7889999999876665544
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-20 Score=212.90 Aligned_cols=236 Identities=14% Similarity=0.282 Sum_probs=191.2
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCC----------------------------c--------------------
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTS----------------------------Q-------------------- 544 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg----------------------------~-------------------- 544 (819)
..+...++.+|.++++||.|+.|+||.+... .
T Consensus 269 aIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~ 348 (712)
T KOG0283|consen 269 AIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCV 348 (712)
T ss_pred cEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccc
Confidence 3344445555789999999999999987650 0
Q ss_pred ----------eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe---CCceee
Q psy10114 545 ----------VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW---NGDMLS 611 (819)
Q Consensus 545 ----------~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw---ng~~La 611 (819)
...++.+.+|.+.|.+++||.++ +|.+++.|.+|++|++...++++.|. |..-|+|++| |.++++
T Consensus 349 ~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFi 426 (712)
T KOG0283|consen 349 LLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFI 426 (712)
T ss_pred cCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEe
Confidence 01135567899999999999865 88899999999999999999999886 9999999999 577999
Q ss_pred eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec--C------CCC
Q psy10114 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE--H------LAA 683 (819)
Q Consensus 612 SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~--h------~~~ 683 (819)
+|+-||.|++|++...+ +.....-.+-|++++|.|||+..++|+.+|.+++|+....+....+.- + ...
T Consensus 427 SGSLD~KvRiWsI~d~~---Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~r 503 (712)
T KOG0283|consen 427 SGSLDGKVRLWSISDKK---VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKR 503 (712)
T ss_pred ecccccceEEeecCcCe---eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCce
Confidence 99999999999998744 344445558899999999999999999999999999988776555431 1 237
Q ss_pred EEEEEEcCCCCe-EEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 684 VKAIAWSPHHHG-LLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 684 VtsLafSPdg~~-LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
|+.+.|.|.... ++++. .|..|||+|.++.+.+..++. .+.-....|+.||+++++ +++|..|++|++..
T Consensus 504 ITG~Q~~p~~~~~vLVTS---nDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs--~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 504 ITGLQFFPGDPDEVLVTS---NDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVS--ASEDSWVYIWKNDS 577 (712)
T ss_pred eeeeEecCCCCCeEEEec---CCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEE--eecCceEEEEeCCC
Confidence 999999986653 66654 799999999988888777642 334456789999999999 77999999999853
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.2e-19 Score=184.79 Aligned_cols=259 Identities=15% Similarity=0.239 Sum_probs=205.6
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+..+.++ ++.+++++.||.+++||....+.... + .|+.++.+++|.+ ...+++|+.||.|+.+|+.++... .+
T Consensus 16 IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~--~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~-~i 90 (323)
T KOG1036|consen 16 ISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLK--F-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED-QI 90 (323)
T ss_pred eeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhh--e-ecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce-ee
Confidence 4555555 56799999999999999988754432 2 3689999999987 568899999999999999887644 45
Q ss_pred ecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 594 VGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 594 ~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
..|...|.|+... .+.+++||.|++|++||.+.... ...+. ....|.++..+ |+.|++|+.|..+.+||+++.
T Consensus 91 gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~--~~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~ 165 (323)
T KOG1036|consen 91 GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVV--VGTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNL 165 (323)
T ss_pred ccCCCceEEEEeeccCCeEEEcccCccEEEEecccccc--ccccc-cCceEEEEecc--CCEEEEeecCceEEEEEcccc
Confidence 6799999999996 77999999999999999997332 22222 23478887764 778999999999999999987
Q ss_pred ceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee----EEEc------C----CCCeEEEEEcc
Q psy10114 672 SPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM----QCVD------T----GSQVCNLAWSK 735 (819)
Q Consensus 672 ~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v----~~l~------~----~s~V~sLafSp 735 (819)
....+.. .-+-.+.++++-|++...++++ .||.|.+=.+...+.. ..++ . .-+|.+++|+|
T Consensus 166 ~~~~q~reS~lkyqtR~v~~~pn~eGy~~sS---ieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp 242 (323)
T KOG1036|consen 166 DEPFQRRESSLKYQTRCVALVPNGEGYVVSS---IEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHP 242 (323)
T ss_pred cchhhhccccceeEEEEEEEecCCCceEEEe---ecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecc
Confidence 6433222 2356789999999888777754 7999988666654221 1111 1 23689999999
Q ss_pred CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
-...+++ |+.||.|.+||..+.+.+..+......|.+++|+.||..||+|+.
T Consensus 243 ~~~tfaT--gGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 243 IHGTFAT--GGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred ccceEEe--cCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 9999999 899999999999999999999888888999999999999999875
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-19 Score=207.37 Aligned_cols=269 Identities=21% Similarity=0.312 Sum_probs=214.3
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCC-ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTS-QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg-~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
++...+++.+++.+++++.||.|++|+.... +..+ .+..++..|.+++-. +.+|++|+.+++|.+|...+++.-.
T Consensus 15 G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~--ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~~~ 90 (933)
T KOG1274|consen 15 GLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPE--TIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGEEDT 90 (933)
T ss_pred ceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCc--hhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCCccc
Confidence 3455566667889999999999999997665 2222 122256777777754 5699999999999999998887655
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+...+-++.++++ +|+.++.||.|-.|++-+..+.. ....+.+|..+|.++.|+|++++||+.+.||.|++||++
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s--~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSS--QEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccc--hheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 55555677888888 46699999999999999998866 358899999999999999999999999999999999999
Q ss_pred CCceeEEEecC--------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---CCCCeEEEEEccCCC
Q psy10114 670 SMSPLQTYTEH--------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---TGSQVCNLAWSKHSS 738 (819)
Q Consensus 670 t~~~i~t~~~h--------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---~~s~V~sLafSpdg~ 738 (819)
++....++.+- ...+..++|+|++..+++.+ .|++|++|+..+.+....+. ..+.++.++|+|+|+
T Consensus 169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~---~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~ 245 (933)
T KOG1274|consen 169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP---VDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGK 245 (933)
T ss_pred cchhhhhcccCCccccccccceeeeeeecCCCCeEEeec---cCCeEEEEccCCceeheeecccccccceEEEEEcCCCc
Confidence 98876666431 34567899999988888876 69999999999988877773 234499999999999
Q ss_pred EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 739 ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
++++ ++.+|+|.|||..+... ......|.+++|.|++.-+-.-...|..-+|
T Consensus 246 YiAA--s~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 246 YIAA--STLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred EEee--eccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 9999 88999999999987322 2335679999999988766544444444333
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-20 Score=189.08 Aligned_cols=245 Identities=20% Similarity=0.374 Sum_probs=200.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---eEEEEEecCCCCeEEEEe-C---CceeeeccCCCeEEEEEC
Q psy10114 552 SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---KQVHKLVGHTARVGALAW-N---GDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 552 ~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---k~i~tl~gHs~~V~sLaw-n---g~~LaSGS~DGtI~IWDi 624 (819)
..|++.|.++...-.|+.||+++.|++|+|+.++.+ +.+.++.||+++|..++| + |++|++++.||.|.+|.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 458889999888888999999999999999999764 568899999999999999 3 789999999999999999
Q ss_pred CCCCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCC---ceeEEEecCCCCEEEEEEcCC---CC--
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSM---SPLQTYTEHLAAVKAIAWSPH---HH-- 694 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~---~~i~t~~~h~~~VtsLafSPd---g~-- 694 (819)
.+++.........|...|++++|.|. |-.||+++.||.|.|.+.++. ...+....|.-.|++++|.|. |.
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 99887777788899999999999985 568999999999999988754 223445679999999999986 31
Q ss_pred --------eEEEEEccCCCCeEEEEECCCCcee--EEE-cCCCCeEEEEEccCC----CEEEEEEecCCCeEEEEECCCC
Q psy10114 695 --------GLLASGGGTADRCIRFWNTLTGQPM--QCV-DTGSQVCNLAWSKHS----SELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 695 --------~LLaSGgGs~DgtIrIWDl~tg~~v--~~l-~~~s~V~sLafSpdg----~~LastsGssDg~I~IWDl~s~ 759 (819)
.-+++|| .|+.|++|+..+++-+ ..+ .|..-|..++|.|.- ..+++ ++.||.+.||.....
T Consensus 168 ~~~~~~~~krlvSgG--cDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS--~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGG--CDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIAS--CSQDGTVIIWTKDEE 243 (299)
T ss_pred ccCcccccceeeccC--CccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEE--ecCCCcEEEEEecCc
Confidence 2366766 8999999999886422 223 467789999999975 34555 889999999987621
Q ss_pred --c-EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 760 --T-QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 760 --k-~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
. +...++.....+..+.||..|+.|+.+++|..|.+|.-..
T Consensus 244 ~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 244 YEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred cCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 1 1222344567899999999999999999999999997543
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.5e-20 Score=191.07 Aligned_cols=248 Identities=17% Similarity=0.323 Sum_probs=210.3
Q ss_pred EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEE--
Q psy10114 548 LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRD-- 623 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWD-- 623 (819)
...+.+|.+.|..++-......+.+++.|.+.+||.+++++++.++.||.+.|+++.| ++.++++++.|++-.||.
T Consensus 141 vre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~a 220 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAA 220 (481)
T ss_pred hhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHh
Confidence 3467899999999999888889999999999999999999999999999999999999 477899999999999996
Q ss_pred ----CCCC----------------------------C----ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 624 ----VRTP----------------------------N----SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 624 ----i~t~----------------------------~----~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
+..+ . ..++..+.+|...|.+..|-..|+.+++++.|.+..+||
T Consensus 221 v~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwD 300 (481)
T KOG0300|consen 221 VNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWD 300 (481)
T ss_pred hcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeee
Confidence 2110 0 123456788999999999999999999999999999999
Q ss_pred CCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEE-cCCCCeEEEEEccCCCEEEEEEe
Q psy10114 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCV-DTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 668 l~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l-~~~s~V~sLafSpdg~~LastsG 745 (819)
+++++++..+.+|....+.++-+|.++ ++++++ .|.+.++||++..- .+..+ .|...|+++.|..+.+ +++ |
T Consensus 301 VEtge~v~~LtGHd~ELtHcstHptQr-LVvTsS--rDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~-vVS--g 374 (481)
T KOG0300|consen 301 VETGEVVNILTGHDSELTHCSTHPTQR-LVVTSS--RDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDR-VVS--G 374 (481)
T ss_pred eccCceeccccCcchhccccccCCcce-EEEEec--cCceeEeccchhhcceeeeecccccceeEEEEecCCc-eee--c
Confidence 999999999999999999999999987 445544 89999999998432 23333 4667899999987654 555 8
Q ss_pred cCCCeEEEEECCCCc-EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 746 YSQNQILVWKYPTLT-QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 746 ssDg~I~IWDl~s~k-~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
++|.+|++||++++. ++.+++ -+.+++.++.+..+..|+.--.+..||+||+....
T Consensus 375 SDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~R 431 (481)
T KOG0300|consen 375 SDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNR 431 (481)
T ss_pred CCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCc
Confidence 899999999999765 566665 56789999999988899999899999999997654
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-17 Score=176.10 Aligned_cols=250 Identities=14% Similarity=0.144 Sum_probs=186.4
Q ss_pred EEec--CCeE-EEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecCceEEEeecCCceEEEEEe
Q psy10114 519 VDWS--SQNV-LSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 519 ldwS--~~~L-La~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~DGtI~IWDl~tgk~i~tl~ 594 (819)
+.|+ ++.+ ++++.++.|++||..+++.... +..+ ..+..++|+|+|+.++++ +.|+.+++||+.+++.+..+.
T Consensus 36 l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~--~~~~-~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~ 112 (300)
T TIGR03866 36 ITLSKDGKLLYVCASDSDTIQVIDLATGEVIGT--LPSG-PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP 112 (300)
T ss_pred eEECCCCCEEEEEECCCCeEEEEECCCCcEEEe--ccCC-CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee
Confidence 4454 4455 4556789999999998876543 3333 335788999999977665 568999999999988887776
Q ss_pred cCCCCeEEEEe--CCceeeeccCCC-eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE-ECCCeEEEEECCC
Q psy10114 595 GHTARVGALAW--NGDMLSSGSRDR-MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG-GNDNRLYVWNLHS 670 (819)
Q Consensus 595 gHs~~V~sLaw--ng~~LaSGS~DG-tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DGtI~IWDl~t 670 (819)
.+ ..+.+++| +++.+++++.++ .+.+||.++.+. ..... ......+++|+++++.++++ ..++.|.+||+++
T Consensus 113 ~~-~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~ 188 (300)
T TIGR03866 113 VG-VEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEI--VDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT 188 (300)
T ss_pred CC-CCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeE--EEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc
Confidence 32 34567888 577888887765 567789876542 12222 23456789999999988654 4689999999999
Q ss_pred CceeEEEecCC-------CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEE
Q psy10114 671 MSPLQTYTEHL-------AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 671 ~~~i~t~~~h~-------~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Last 743 (819)
++.+..+..+. .....++|+|+++.++++.+ .++.+.+||.++++.+..+..+..+.+++|+|+|+.++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 266 (300)
T TIGR03866 189 RKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG--PANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTT 266 (300)
T ss_pred ceeeeeeeecccccccccCCccceEECCCCCEEEEEcC--CCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEE
Confidence 88777664321 12346889999998776654 4678999999999887777667789999999999999874
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp 779 (819)
+..++.|.+||..+++.+..++.. ....+++++|
T Consensus 267 -~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 267 -NGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred -cCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 356899999999999999999754 5558888765
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-20 Score=212.31 Aligned_cols=242 Identities=19% Similarity=0.409 Sum_probs=195.7
Q ss_pred EEEEEec---CCeEEEEECCCeEEEEEcCCC-ceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceEE
Q psy10114 516 LNLVDWS---SQNVLSVGLGSCVYLWSACTS-QVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 516 v~~ldwS---~~~LLa~g~Dg~V~LWd~~tg-~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
++.+.|+ .+.+++++..|.|.+||+... +...+..+..|+..++++.|++.. .+|++|+.||+|++||++..+..
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~ 169 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK 169 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc
Confidence 3445666 456899999999999999762 333445788899999999999854 78999999999999999999999
Q ss_pred EEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 591 HKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 591 ~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
.++.+....|.++.|+ ++.++++.+.|.+++||++.+. .....+.+|.+.|.|+.|+|++.+||+||.|++|+|||
T Consensus 170 ~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~-r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd 248 (839)
T KOG0269|consen 170 STFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD-RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWD 248 (839)
T ss_pred ccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch-hHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEe
Confidence 9999999999999994 7799999999999999999987 46788999999999999999999999999999999999
Q ss_pred CCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEE-cCCCCeEEEEEccCCCEEEEEE
Q psy10114 668 LHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCV-DTGSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 668 l~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l-~~~s~V~sLafSpdg~~Lasts 744 (819)
..+.+...... ...++|..++|-|...+.+++++--.|-.|+|||++..- +..++ .|...++.++|...... ...+
T Consensus 249 ~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~-~l~s 327 (839)
T KOG0269|consen 249 MTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRI-NLWS 327 (839)
T ss_pred ccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCce-eeEe
Confidence 98765433222 246889999999999998888775678999999998653 33344 56777889999663332 2223
Q ss_pred ecCCCeEEEEECCCC
Q psy10114 745 GYSQNQILVWKYPTL 759 (819)
Q Consensus 745 GssDg~I~IWDl~s~ 759 (819)
++.|+.|..-.+++.
T Consensus 328 ~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 328 CSKDGTVLQHLFKNA 342 (839)
T ss_pred ecCccHHHHhhhhcc
Confidence 677887765554443
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=201.07 Aligned_cols=276 Identities=21% Similarity=0.306 Sum_probs=210.3
Q ss_pred eEEEEECCCeEEEEEcCCCceE----EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE--EecCCC
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVT----RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK--LVGHTA 598 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~----~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t--l~gHs~ 598 (819)
.|+.+..+|.|.++|....+.. ++.....|...|..++|.|....|++++.|.++++||+++++.+.. +.||.+
T Consensus 66 iLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~ 145 (720)
T KOG0321|consen 66 ILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTG 145 (720)
T ss_pred eEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccccc
Confidence 4566677899999998765433 2345667999999999999778999999999999999999988877 889999
Q ss_pred CeEEEEe---CCceeeeccCCCeEEEEECCCCCc-------------------------cceEEEecccCCeEE---EEE
Q psy10114 599 RVGALAW---NGDMLSSGSRDRMILQRDVRTPNS-------------------------QSERRLVGHRQEVCG---LKW 647 (819)
Q Consensus 599 ~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~-------------------------~~v~~l~gH~~~Vts---Laf 647 (819)
.|.+++| +...+++|++||.|.+||++.... +....-..+...|.+ +.+
T Consensus 146 SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~ 225 (720)
T KOG0321|consen 146 SVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVL 225 (720)
T ss_pred ccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEE
Confidence 9999999 688999999999999999975421 011122334444555 556
Q ss_pred CCCCCEEEEEEC-CCeEEEEECCCCceeEE--------EecC---CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC
Q psy10114 648 SPDNQYLASGGN-DNRLYVWNLHSMSPLQT--------YTEH---LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 648 Spdg~~LaSGS~-DGtI~IWDl~t~~~i~t--------~~~h---~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t 715 (819)
..|...||++|. |+.|+|||++....... +..| .-.+.++.....|.++++++ .|+.|.+||+.+
T Consensus 226 fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsC---tD~sIy~ynm~s 302 (720)
T KOG0321|consen 226 FKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASC---TDNSIYFYNMRS 302 (720)
T ss_pred EeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEe---cCCcEEEEeccc
Confidence 678889999888 99999999987543222 1122 34577888888899999998 599999999986
Q ss_pred Cce--eEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE-EEEEecCCCCEEEEEEecC-CCEEEEEe
Q psy10114 716 GQP--MQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ-VAKLTGHSYRVLYLAMSPD-GEAIVTGA 788 (819)
Q Consensus 716 g~~--v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~-l~sl~gH~~~VtsLafSpD-G~~LaSGS 788 (819)
-.. +..+.+ ...-..-..+||+.++++ |..|.+..+|.+.+.+. ...+.||.-.|++++|.|. -.-+++++
T Consensus 303 ~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~S--gSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcS 380 (720)
T KOG0321|consen 303 LSISPVAEFSGKLNSSFYVKSELSPDDCSLLS--GSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCS 380 (720)
T ss_pred cCcCchhhccCcccceeeeeeecCCCCceEec--cCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeec
Confidence 432 222221 112233457899999999 88999999999986543 5667899999999999873 23477789
Q ss_pred CCCcEEEEECCCCceec
Q psy10114 789 GDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 789 ~DGtIrIWdl~s~~~~~ 805 (819)
+|-.+++|++..+-...
T Consensus 381 dD~~~kiW~l~~~l~e~ 397 (720)
T KOG0321|consen 381 DDFRVKIWRLSNGLEEI 397 (720)
T ss_pred cCcceEEEeccCchhhc
Confidence 99999999997655433
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-19 Score=190.82 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=205.7
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccce
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v 632 (819)
...++++...+..+.+.+|+.|..+.++|..+++.+..++||...|+.+.++ .+.+++++.|..|++|...... ..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s--~~ 296 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS--EP 296 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc--Cc
Confidence 3567888888887899999999999999999999999999999999999995 4588999999999999987755 33
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec--CCCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE--HLAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
.....|...|+.+..+|.|.+|+++++||+..+.|++++..+..... ..-.+++.+|+|||- ++.+| +.|+.+++
T Consensus 297 ~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgL-ifgtg--t~d~~vki 373 (506)
T KOG0289|consen 297 TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGL-IFGTG--TPDGVVKI 373 (506)
T ss_pred cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCce-EEecc--CCCceEEE
Confidence 66788999999999999999999999999999999999998776654 234589999999996 55554 59999999
Q ss_pred EECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC-CCCEEEEEEecCCCEEEEEe
Q psy10114 711 WNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH-SYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 711 WDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH-~~~VtsLafSpDG~~LaSGS 788 (819)
||+.++..+..+. |.++|..++|+.+|-++++ +.+|+.|++||++..+...++.-. ...|.++.|.+.|++|+.++
T Consensus 374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat--~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g 451 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLAT--AADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAG 451 (506)
T ss_pred EEcCCccccccCCCCCCceeEEEeccCceEEEE--EecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeec
Confidence 9999998877774 6788999999999999999 678999999999988877777633 34699999999999999998
Q ss_pred CCCcEEEEECCCC
Q psy10114 789 GDETLRFWNVFSK 801 (819)
Q Consensus 789 ~DGtIrIWdl~s~ 801 (819)
.|=.|++++-.++
T Consensus 452 ~~l~Vy~~~k~~k 464 (506)
T KOG0289|consen 452 SDLQVYICKKKTK 464 (506)
T ss_pred ceeEEEEEecccc
Confidence 7766665554333
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.9e-20 Score=201.46 Aligned_cols=247 Identities=23% Similarity=0.347 Sum_probs=210.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---eEEEEEec--CCCCeEEEEe--CCceeeeccCCCeEEEEECC
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---KQVHKLVG--HTARVGALAW--NGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---k~i~tl~g--Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~ 625 (819)
.|.+-|.+++.|...+++++|+. |.|+|||+... ..+..+.. ...-+.++.. ||..|++|+.-.++.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 47788999999999999999986 67999999643 23444432 2344555555 78999999999999999999
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.+.......+........+++.+||.+..+++..||.|.|||+.+...++.|++|...+.||..+++|..+.+ || -|
T Consensus 496 apTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWT-GG--lD 572 (705)
T KOG0639|consen 496 APTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWT-GG--LD 572 (705)
T ss_pred CCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeec-CC--Cc
Confidence 8775544455554556778999999999999999999999999999999999999999999999999987665 44 89
Q ss_pred CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEE
Q psy10114 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV 785 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~La 785 (819)
++||.||+++++.+...+..++|.++..+|++..+++ |.+++.+.+.... +.....+.-|+..|.++.|++.|++++
T Consensus 573 ntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlav--GMens~vevlh~s-kp~kyqlhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639|consen 573 NTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAV--GMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred cceeehhhhhhhhhhhhhhhhhheecccCCCccceee--ecccCcEEEEecC-CccceeecccccEEEEEEecccCceee
Confidence 9999999999999999999999999999999999999 9999999988864 444556777999999999999999999
Q ss_pred EEeCCCcEEEEECCCCceecc
Q psy10114 786 TGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 786 SGS~DGtIrIWdl~s~~~~~k 806 (819)
+.+.|..+..|..--+....+
T Consensus 650 StGkDnlLnawrtPyGasiFq 670 (705)
T KOG0639|consen 650 STGKDNLLNAWRTPYGASIFQ 670 (705)
T ss_pred ecCchhhhhhccCccccceee
Confidence 999999999999887766544
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=181.77 Aligned_cols=277 Identities=21% Similarity=0.356 Sum_probs=214.4
Q ss_pred ceEEEEEec---CCeEEEEECCCeEEEEEcCCCce--------EEEE-----eccCCCCCeEEEEEcC-CCCEEEEEecC
Q psy10114 514 FYLNLVDWS---SQNVLSVGLGSCVYLWSACTSQV--------TRLC-----DLSADGNSVTSVAWNE-RGNLVAVGTHH 576 (819)
Q Consensus 514 fyv~~ldwS---~~~LLa~g~Dg~V~LWd~~tg~~--------~~l~-----~l~~h~~~VtsLafSp-dG~~LAsGs~D 576 (819)
..+|.++-+ +.++++|+.||.|.+||++.... ...+ .-.+|.-.|.++.|-| |...+.+++-|
T Consensus 44 GsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFD 123 (397)
T KOG4283|consen 44 GSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFD 123 (397)
T ss_pred CccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeeccccc
Confidence 456666655 56899999999999999976431 1112 1245777899999998 55688889999
Q ss_pred ceEEEeecCCceEEEEEecCCCCeEEEEeC-----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 577 GYVQVWDVSVAKQVHKLVGHTARVGALAWN-----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~gHs~~V~sLawn-----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
.+++|||..+.+....++ -.+.|.+-+++ --.+++|.+|-.|++.|+.++.. ...+.||.+.|.++.|+|..
T Consensus 124 htlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~--sH~LsGHr~~vlaV~Wsp~~ 200 (397)
T KOG4283|consen 124 HTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSF--SHTLSGHRDGVLAVEWSPSS 200 (397)
T ss_pred ceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcc--eeeeccccCceEEEEeccCc
Confidence 999999999988777765 34566666663 34788899999999999999874 58999999999999999976
Q ss_pred C-EEEEEECCCeEEEEECCCC-ceeEEE--------------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC
Q psy10114 652 Q-YLASGGNDNRLYVWNLHSM-SPLQTY--------------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 652 ~-~LaSGS~DGtI~IWDl~t~-~~i~t~--------------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t 715 (819)
. .|++|+.||.|++||++.. .+...+ ..|.+.|..++|+.++.+++..| .|..+++|+..+
T Consensus 201 e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~g---td~r~r~wn~~~ 277 (397)
T KOG4283|consen 201 EWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCG---TDDRIRVWNMES 277 (397)
T ss_pred eeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhcc---CccceEEeeccc
Confidence 6 5789999999999999754 222222 35778899999999999888776 699999999998
Q ss_pred CceeEE-E---cC----CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 716 GQPMQC-V---DT----GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 716 g~~v~~-l---~~----~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
|+.... + -+ +-.+. +. +-+...++.. -.++.+.++.+-++..+..+.+|...|.+.++-|+=+...+|
T Consensus 278 G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~--p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg 353 (397)
T KOG4283|consen 278 GRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLF--PNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTG 353 (397)
T ss_pred CcccccccccccccccccceEE-Ee-ecccceEEEE--ecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhcc
Confidence 864211 1 01 11121 22 3344444442 345899999999999999999999999999999998999999
Q ss_pred eCCCcEEEEECCC
Q psy10114 788 AGDETLRFWNVFS 800 (819)
Q Consensus 788 S~DGtIrIWdl~s 800 (819)
..|+.+..|-..-
T Consensus 354 ~~d~ni~~w~p~l 366 (397)
T KOG4283|consen 354 DMNGNIYMWSPAL 366 (397)
T ss_pred ccCCccccccccc
Confidence 9999999998843
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=196.65 Aligned_cols=258 Identities=21% Similarity=0.348 Sum_probs=212.1
Q ss_pred EEEEEecCCe-EEEE--ECCCeEEEEEcC--CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 516 LNLVDWSSQN-VLSV--GLGSCVYLWSAC--TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 516 v~~ldwS~~~-LLa~--g~Dg~V~LWd~~--tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
++.+.|+..+ ++++ +.|..+.+|.-. ++++..+....+ +.-.|++......++++|+..|.|+|||++...+.
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g--d~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~h 114 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG--DNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIH 114 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEecccCCCCccceeecccc--chHHHHhhhhcceeeeccCcCceeeehhhHHHHHh
Confidence 5678899776 4444 345668888643 334444433333 34556666666689999999999999999988888
Q ss_pred EEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecc-cCCeEEEEECCCCCE-EEEEECCCeEEEE
Q psy10114 591 HKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGH-RQEVCGLKWSPDNQY-LASGGNDNRLYVW 666 (819)
Q Consensus 591 ~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH-~~~VtsLafSpdg~~-LaSGS~DGtI~IW 666 (819)
+.+++|...|+++.+| ..++++++..|.|.+..+.++... ..+... .+.|.-+.+++..+. |.+++.+|.|.+|
T Consensus 115 r~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t--t~f~~~sgqsvRll~ys~skr~lL~~asd~G~Vtlw 192 (673)
T KOG4378|consen 115 RFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT--TTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLW 192 (673)
T ss_pred hhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc--cceecCCCCeEEEeecccccceeeEeeccCCeEEEE
Confidence 9999999999999995 569999999999999999887643 333333 455678999997764 5678999999999
Q ss_pred ECCCCceeEEE-ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 667 NLHSMSPLQTY-TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 667 Dl~t~~~i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
|+....++..+ +.|.++...|+|+|.+..++++-| .|+.|.+||.+..+....+.-..+...++|+++|.+|++ |
T Consensus 193 Dv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG--~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~a--G 268 (673)
T KOG4378|consen 193 DVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVG--YDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCA--G 268 (673)
T ss_pred eccCCCcccchhhhccCCcCcceecCCccceEEEec--ccceEEEeecccccccceeeecCCcceeeecCCceEEEe--e
Confidence 99988887765 479999999999999999999987 999999999999888888888899999999999999999 9
Q ss_pred cCCCeEEEEECC-CCcEEEEEecCCCCEEEEEEecCC
Q psy10114 746 YSQNQILVWKYP-TLTQVAKLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 746 ssDg~I~IWDl~-s~k~l~sl~gH~~~VtsLafSpDG 781 (819)
...|.|..||++ +..++..+.+|...|++++|-+..
T Consensus 269 ~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 269 NSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred cCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 999999999998 456788999999999999997764
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-20 Score=213.26 Aligned_cols=245 Identities=22% Similarity=0.436 Sum_probs=216.3
Q ss_pred CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--Cc
Q psy10114 531 LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GD 608 (819)
Q Consensus 531 ~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~ 608 (819)
....+++||.. .+..|...|.++..-..++.+++|+.|..+-+|.+.....+..+.+|..+|.++.|+ ..
T Consensus 12 ~~t~Lr~~~~~--------~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~ 83 (825)
T KOG0267|consen 12 RATKLRVWDTR--------EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSER 83 (825)
T ss_pred eeeccccccch--------hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchh
Confidence 34455677643 244577888898887788999999999999999998888888899999999999995 55
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEE
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIA 688 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLa 688 (819)
.|++|+.+|+|++||+.... .++++.+|...++.+.|+|-+.+.|+|+.|+.+++||.+...+.+.+.+|...|..++
T Consensus 84 LlaagsasgtiK~wDleeAk--~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~ 161 (825)
T KOG0267|consen 84 LLAAGSASGTIKVWDLEEAK--IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLR 161 (825)
T ss_pred hhcccccCCceeeeehhhhh--hhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEe
Confidence 88999999999999999755 5679999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec
Q psy10114 689 WSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767 (819)
Q Consensus 689 fSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g 767 (819)
|+|+|.+ +++|+ .|.++++||...|+....+. +...+..+.|+|..-.++. |+.|+.+++||+++.+.+.....
T Consensus 162 lsP~Gr~-v~~g~--ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~--Gs~d~tv~f~dletfe~I~s~~~ 236 (825)
T KOG0267|consen 162 LSPDGRW-VASGG--EDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAP--GSSDRTVRFWDLETFEVISSGKP 236 (825)
T ss_pred ecCCCce-eeccC--CcceeeeecccccccccccccccccccccccCchhhhhcc--CCCCceeeeeccceeEEeeccCC
Confidence 9999985 44554 79999999999999999987 7788999999998777777 99999999999999999988888
Q ss_pred CCCCEEEEEEecCCCEEEEEeCC
Q psy10114 768 HSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 768 H~~~VtsLafSpDG~~LaSGS~D 790 (819)
....|.+++|+++|..+.+|..+
T Consensus 237 ~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 237 ETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred ccCCceeeeecCCceeeecCchh
Confidence 88999999999999988887654
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=188.91 Aligned_cols=213 Identities=23% Similarity=0.378 Sum_probs=179.5
Q ss_pred EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC------C----------CccceEEEecccCCeEEEEECCCC
Q psy10114 590 VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT------P----------NSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 590 i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t------~----------~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
...+..|.+.+.+-+| +|.++++||.|..|++.|++. . ....++++..|.++|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 4456779999999999 688999999999999999871 1 113467888999999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE----cCC
Q psy10114 652 QYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV----DTG 725 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l----~~~ 725 (819)
..|++|+.|++|++||.......+-++ ....+|.++.|+|.|.++++ |+.-.++++||+.+-++...- .+.
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllv---gTdHp~~rlYdv~T~QcfvsanPd~qht 261 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLV---GTDHPTLRLYDVNTYQCFVSANPDDQHT 261 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEE---ecCCCceeEEeccceeEeeecCcccccc
Confidence 999999999999999997654333222 24578999999999998776 457899999999998887654 345
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-cCC-CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-GHS-YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-gH~-~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
..|+++.+++.|+..++ |+.||.|++||--+++++.++. +|. ..|.+..|+.+|+++++.+.|..+++|++.++..
T Consensus 262 ~ai~~V~Ys~t~~lYvT--aSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~ 339 (430)
T KOG0640|consen 262 GAITQVRYSSTGSLYVT--ASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRM 339 (430)
T ss_pred cceeEEEecCCccEEEE--eccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCce
Confidence 67999999999999888 8899999999999999888775 564 4589999999999999999999999999999887
Q ss_pred eccc
Q psy10114 804 SQRE 807 (819)
Q Consensus 804 ~~k~ 807 (819)
.+..
T Consensus 340 l~~Y 343 (430)
T KOG0640|consen 340 LKEY 343 (430)
T ss_pred EEEE
Confidence 6554
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-18 Score=191.33 Aligned_cols=276 Identities=20% Similarity=0.340 Sum_probs=223.6
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+.+++++ ++.++.+-.+|.|.+|++..+-.....-..+....|.+++|++ |..|++.+.+|.|.-||+.++++...+
T Consensus 28 I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~ 106 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNI 106 (691)
T ss_pred eEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEe
Confidence 5566666 4567777789999999998875544322234567899999995 557778888999999999999999999
Q ss_pred ecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 594 VGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 594 ~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
....+.|++++.+ ++.++.|+.||.+..+++..+.......+...++.|.+++|++++..+++|+.||.|++||..++
T Consensus 107 d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~ 186 (691)
T KOG2048|consen 107 DSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSG 186 (691)
T ss_pred cCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCC
Confidence 9999999999994 67999999999888888887776666666677889999999999999999999999999999998
Q ss_pred ceeEEEe-------c-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEE
Q psy10114 672 SPLQTYT-------E-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 672 ~~i~t~~-------~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~Las 742 (819)
..+.... . ...-|.++.|-.++ .+++|. ..|+|.+||...|..++.+. +.+.|.+++..++++.+++
T Consensus 187 ~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sgD--S~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs 262 (691)
T KOG2048|consen 187 QTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASGD--SAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS 262 (691)
T ss_pred ceEEEeeecccccccCCceEEEEEEEeecC--cEEEec--CCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE
Confidence 8766322 1 33457778877665 466654 78999999999999888774 6788999999999999999
Q ss_pred EEecCCCeEEEEECCCCcE----EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 743 THGYSQNQILVWKYPTLTQ----VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~----l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
++.|+.|.-+...+.+. ......|...|.+++..++ .+++|+.|.++.+=....
T Consensus 263 --aGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~ 320 (691)
T KOG2048|consen 263 --AGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSRE 320 (691)
T ss_pred --ccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccc
Confidence 77899998888765543 2233478888999999877 899999999988765544
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=198.12 Aligned_cols=237 Identities=25% Similarity=0.397 Sum_probs=201.2
Q ss_pred EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE--EEEecCCCCeEE-EEe---CCceeeeccCCCeEEE
Q psy10114 548 LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV--HKLVGHTARVGA-LAW---NGDMLSSGSRDRMILQ 621 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i--~tl~gHs~~V~s-Law---ng~~LaSGS~DGtI~I 621 (819)
.+.+.+|...|..++..+. ..+++++.||++++|+-..++.+ ..+.+|.+-|.+ +++ ++..+++|+.|++|.+
T Consensus 7 s~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v 85 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIV 85 (745)
T ss_pred EEEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEE
Confidence 4578899999999987754 48999999999999997655443 456778887776 777 3457999999999999
Q ss_pred EECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 622 RDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 622 WDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg 701 (819)
|...+.. +...+.+|.+.||+++...++. +++||.|.++++|-. +++...+.+|+++|.+++.-|++ .+++|+
T Consensus 86 ~~~~~~~--P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~--~~vTgs 158 (745)
T KOG0301|consen 86 FKLSQAE--PLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN--TYVTGS 158 (745)
T ss_pred EecCCCC--chhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC--cEEecc
Confidence 9998866 5688999999999999888877 999999999999975 55667799999999999999998 455655
Q ss_pred cCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 702 GTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
.|++|++|.- ++.++++ .|...|..+++-+++.++ + ++.||.|+.|++ +++.+.++.||+.-|.+++...+
T Consensus 159 --aDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~fl-S--csNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~ 230 (745)
T KOG0301|consen 159 --ADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFL-S--CSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALS 230 (745)
T ss_pred --CcceeeeccC--CchhhhhccchhheeeeEEecCCCeE-e--ecCCceEEEEec-cCceeeeeeccceEEEEEEecCC
Confidence 8999999975 6666766 467789999998876654 4 468999999998 89999999999999999998888
Q ss_pred CCEEEEEeCCCcEEEEECCC
Q psy10114 781 GEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s 800 (819)
++.++++++|++++||+...
T Consensus 231 ~~~Ivs~gEDrtlriW~~~e 250 (745)
T KOG0301|consen 231 DGLIVSTGEDRTLRIWKKDE 250 (745)
T ss_pred CCeEEEecCCceEEEeecCc
Confidence 99999999999999999873
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.4e-18 Score=177.40 Aligned_cols=276 Identities=19% Similarity=0.220 Sum_probs=202.1
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEE--EEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCce--
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTR--LCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAK-- 588 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~--l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk-- 588 (819)
+.+++|+ |+.+++++.|+.|++|++.+-.... .....-.-+..+.+.|+||-+-+++.. ...++++|.+.+.+
T Consensus 89 vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG 168 (420)
T KOG2096|consen 89 VTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDG 168 (420)
T ss_pred eeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccC
Confidence 4555555 6789999999999999987643221 111112234678999999987666554 44578998764322
Q ss_pred -EEE---------EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEE
Q psy10114 589 -QVH---------KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLAS 656 (819)
Q Consensus 589 -~i~---------tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaS 656 (819)
... .-+.|...+..+-. ++.++++++.|..|.+||++. + .+..+......-...+.||+|+++|+
T Consensus 169 ~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkG-q--~L~~idtnq~~n~~aavSP~GRFia~ 245 (420)
T KOG2096|consen 169 SGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKG-Q--LLQSIDTNQSSNYDAAVSPDGRFIAV 245 (420)
T ss_pred CCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCC-c--eeeeeccccccccceeeCCCCcEEEE
Confidence 111 11235555555555 567999999999999999984 2 34555555555667889999999999
Q ss_pred EECCCeEEEEECC---CC-----ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC----c---eeEE
Q psy10114 657 GGNDNRLYVWNLH---SM-----SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG----Q---PMQC 721 (819)
Q Consensus 657 GS~DGtI~IWDl~---t~-----~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg----~---~v~~ 721 (819)
++..-.|++|.+- .| ..+.++++|+++|..++|+++...+++.+ .||++++||+.-. + .++.
T Consensus 246 ~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS---kDG~wriwdtdVrY~~~qDpk~Lk~ 322 (420)
T KOG2096|consen 246 SGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS---KDGKWRIWDTDVRYEAGQDPKILKE 322 (420)
T ss_pred ecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe---cCCcEEEeeccceEecCCCchHhhc
Confidence 9999999999973 22 23567889999999999999999877664 8999999998631 1 1111
Q ss_pred E-----cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 722 V-----DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 722 l-----~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
. ..++..+.+..+|+|+.+++.+| ..+.++..++++..-+++ .|.+.|.+++|+++|++++|++ |..+++
T Consensus 323 g~~pl~aag~~p~RL~lsP~g~~lA~s~g---s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv 398 (420)
T KOG2096|consen 323 GSAPLHAAGSEPVRLELSPSGDSLAVSFG---SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRV 398 (420)
T ss_pred CCcchhhcCCCceEEEeCCCCcEEEeecC---CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeee
Confidence 1 23455679999999999998654 679999999888877665 6899999999999999999875 678888
Q ss_pred EECCCC
Q psy10114 796 WNVFSK 801 (819)
Q Consensus 796 Wdl~s~ 801 (819)
..-..+
T Consensus 399 ~~ntpg 404 (420)
T KOG2096|consen 399 IRNTPG 404 (420)
T ss_pred ecCCCc
Confidence 874433
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=189.46 Aligned_cols=249 Identities=20% Similarity=0.285 Sum_probs=203.3
Q ss_pred CeEEEEECC-CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 524 QNVLSVGLG-SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 524 ~~LLa~g~D-g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
.+++++... ..+.+|......... ...--.+.|.+++-+|+|.+|+.|+..|.+++|.+.+|+.+..+.+|-..|+|
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~--q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITc 128 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVV--QYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITC 128 (476)
T ss_pred hheeeecccCccccccccCchhhhh--hhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeE
Confidence 455555544 468899886543322 11122578999999999999999999999999999999999999999999999
Q ss_pred EEe--CCceeeeccCCCeEEEEECCC-------CCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCC
Q psy10114 603 LAW--NGDMLSSGSRDRMILQRDVRT-------PNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 603 Law--ng~~LaSGS~DGtI~IWDi~t-------~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~ 671 (819)
+.| ||..+++||.||.|.+|++.. ....+...+..|.-.|+++...+. ..+++++|.|.++++||+..+
T Consensus 129 L~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g 208 (476)
T KOG0646|consen 129 LKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG 208 (476)
T ss_pred EEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc
Confidence 999 677999999999999998642 234566888999999999998764 458999999999999999999
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc----------------eeEEE-cCC--CCeEEEE
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ----------------PMQCV-DTG--SQVCNLA 732 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~----------------~v~~l-~~~--s~V~sLa 732 (819)
..+.++. ....+.+++.+|-+..+++ |+.+|.|.+.++.+-. .+..+ .+. ++|++++
T Consensus 209 ~LLlti~-fp~si~av~lDpae~~~yi---Gt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLa 284 (476)
T KOG0646|consen 209 VLLLTIT-FPSSIKAVALDPAERVVYI---GTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLA 284 (476)
T ss_pred eeeEEEe-cCCcceeEEEcccccEEEe---cCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEE
Confidence 9888876 5788999999999886665 3489999998875432 11122 233 4899999
Q ss_pred EccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 733 WSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 733 fSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
.+-||..|++ |+.||.+++||+.+.+.++++....++|+.+.+.|-
T Consensus 285 is~DgtlLlS--Gd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 285 ISTDGTLLLS--GDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL 330 (476)
T ss_pred EecCccEEEe--eCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence 9999999999 999999999999999998888767788999988553
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.1e-20 Score=208.11 Aligned_cols=217 Identities=28% Similarity=0.516 Sum_probs=192.4
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG 601 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~ 601 (819)
++..+++||.+..+-+|....-. .+..+.+|+..|.|+.|+.+..+|++|+.+|+|++||++.++.++++.||...+.
T Consensus 39 s~r~~~~Gg~~~k~~L~~i~kp~--~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~ 116 (825)
T KOG0267|consen 39 SSRSLVTGGEDEKVNLWAIGKPN--AITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNIT 116 (825)
T ss_pred cceeeccCCCceeeccccccCCc--hhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcc
Confidence 45678888899999999875433 3345789999999999999999999999999999999999999999999999999
Q ss_pred EEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec
Q psy10114 602 ALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 602 sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~ 679 (819)
++.|+ +.+.++|+.|+.+.+||++... +...+.+|...|..+.|+|+|+++++|++|.+++|||...|+....|+.
T Consensus 117 sv~f~P~~~~~a~gStdtd~~iwD~Rk~G--c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~ 194 (825)
T KOG0267|consen 117 SVDFHPYGEFFASGSTDTDLKIWDIRKKG--CSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKS 194 (825)
T ss_pred eeeeccceEEeccccccccceehhhhccC--ceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccccccccc
Confidence 99996 6688999999999999999765 4577888999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGss 747 (819)
|.+.+.++.|+|.. .++++|+ .|+++++||+++-+.+...+. ...|.+.+|++++..+++ |..
T Consensus 195 ~e~~v~sle~hp~e-~Lla~Gs--~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~--G~q 258 (825)
T KOG0267|consen 195 HEGKVQSLEFHPLE-VLLAPGS--SDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLS--GEQ 258 (825)
T ss_pred ccccccccccCchh-hhhccCC--CCceeeeeccceeEEeeccCCccCCceeeeecCCceeeec--Cch
Confidence 99999999999975 4777766 999999999998887776644 467999999999998887 543
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-18 Score=184.94 Aligned_cols=279 Identities=15% Similarity=0.278 Sum_probs=220.4
Q ss_pred eEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEEE
Q psy10114 515 YLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
-++++.|++ ..++++|.|+.++||.+......++..+.-...+|.+.+|.|+|. .+++++....+..||+++.+..+
T Consensus 215 ~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k 294 (514)
T KOG2055|consen 215 GITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTK 294 (514)
T ss_pred CceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccccc
Confidence 466777775 579999999999999987665555555554578999999999998 89999999999999998876433
Q ss_pred --EEecCCC-Ce--EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 592 --KLVGHTA-RV--GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 592 --tl~gHs~-~V--~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
...++.. .+ ..++-++++++..+..|.|.+....+++.. ..++ -.+.|.+++|+.|++.|++++.+|.|.+|
T Consensus 295 ~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli--~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~ 371 (514)
T KOG2055|consen 295 LKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELI--TSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVW 371 (514)
T ss_pred ccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhh--heee-eccEEeeEEEecCCcEEEEEcCCceEEEE
Confidence 3334442 22 234447889999999999999988886643 3332 34679999999999999999999999999
Q ss_pred ECCCCceeEEEecCCC-CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC------CceeEEEc-CCCCeEEEEEccCCC
Q psy10114 667 NLHSMSPLQTYTEHLA-AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT------GQPMQCVD-TGSQVCNLAWSKHSS 738 (819)
Q Consensus 667 Dl~t~~~i~t~~~h~~-~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t------g~~v~~l~-~~s~V~sLafSpdg~ 738 (819)
|++...+++++....+ .-++++.++++. ++++|+ ..|.|.|||..+ .+++..+. ....|++++|++|++
T Consensus 372 nl~~~~~~~rf~D~G~v~gts~~~S~ng~-ylA~GS--~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 372 NLRQNSCLHRFVDDGSVHGTSLCISLNGS-YLATGS--DSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ 448 (514)
T ss_pred ecCCcceEEEEeecCccceeeeeecCCCc-eEEecc--CcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh
Confidence 9999999999874322 235677788888 566654 899999999654 23444442 356799999999999
Q ss_pred EEEEEEecCCCeEEEEECCCCcEEEEEecC---CCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 739 ELVSTHGYSQNQILVWKYPTLTQVAKLTGH---SYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s~k~l~sl~gH---~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
.++.++...++.+++-.+++......+... -+.|+|++|||.|.++|.|..+|.|.+|.+.
T Consensus 449 iLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 449 ILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 999987778899999999988776665533 4569999999999999999999999999874
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-18 Score=185.44 Aligned_cols=244 Identities=24% Similarity=0.460 Sum_probs=189.2
Q ss_pred eEEEEEcC-------CCCEEEEEecCceEEEeecCCceE---------------------EEEEecCCCCeEEEEeC---
Q psy10114 558 VTSVAWNE-------RGNLVAVGTHHGYVQVWDVSVAKQ---------------------VHKLVGHTARVGALAWN--- 606 (819)
Q Consensus 558 VtsLafSp-------dG~~LAsGs~DGtI~IWDl~tgk~---------------------i~tl~gHs~~V~sLawn--- 606 (819)
-.|++|.. .|+++|+|+.|..|.|||+.-... -....+|+..|.+++|+
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 35777743 368999999999999999852110 11134799999999996
Q ss_pred CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEE
Q psy10114 607 GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK 685 (819)
Q Consensus 607 g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~Vt 685 (819)
.+.|+|||.|.+|++||+.++++ ...+..|.+.|.++.|+| ....|++|+.|++|.+.|.+........-...+.|.
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p--~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VE 333 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKP--KSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVE 333 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCc--ceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceE
Confidence 55999999999999999999875 467778999999999999 567899999999999999985332222222467899
Q ss_pred EEEEcCCCCeEEEEEccCCCCeEEEEECCCC-ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE--
Q psy10114 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTG-QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ-- 761 (819)
Q Consensus 686 sLafSPdg~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~-- 761 (819)
.++|.|.....+.++. .||+++-+|+|+. +++.++ .|...|.+++++..-..++++ ++.++.|++|++..-..
T Consensus 334 kv~w~~~se~~f~~~t--ddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t-~s~d~~Vklw~~~~~~~~~ 410 (463)
T KOG0270|consen 334 KVAWDPHSENSFFVST--DDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST-ASTDKVVKLWKFDVDSPKS 410 (463)
T ss_pred EEEecCCCceeEEEec--CCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee-ccccceEEEEeecCCCCcc
Confidence 9999999998888764 9999999999984 788777 578899999999988887776 78999999999864333
Q ss_pred EEEEecCCCCEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceecc
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGE-AIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~-~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+..-.-.-++..|.++.|+-. +++.|+..+.+++||+.+.....+
T Consensus 411 v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~k 456 (463)
T KOG0270|consen 411 VKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVRK 456 (463)
T ss_pred cccccccccceeecccCCCcceEEEecCccceEEEeecccChhHHH
Confidence 222111234466777777654 567788888899999998765544
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=175.31 Aligned_cols=243 Identities=16% Similarity=0.318 Sum_probs=188.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----eEEEEEecCCCCeEEEEe----CCceeeeccCCCeEEEEE
Q psy10114 552 SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----KQVHKLVGHTARVGALAW----NGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 552 ~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----k~i~tl~gHs~~V~sLaw----ng~~LaSGS~DGtI~IWD 623 (819)
.+|.+-|.++.|.+.|+.+|+|+.|++|+|||.++. .+....+.|.+.|..+.| -|+.+++++.|+++.+|.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 467889999999999999999999999999996433 567778899999999999 288999999999999997
Q ss_pred CCC--C-----CccceEEEecccCCeEEEEECC--CCCEEEEEECCCeEEEEECCCCc------eeEEEe-------cCC
Q psy10114 624 VRT--P-----NSQSERRLVGHRQEVCGLKWSP--DNQYLASGGNDNRLYVWNLHSMS------PLQTYT-------EHL 681 (819)
Q Consensus 624 i~t--~-----~~~~v~~l~gH~~~VtsLafSp--dg~~LaSGS~DGtI~IWDl~t~~------~i~t~~-------~h~ 681 (819)
-.. . +.....++......|++++|.| -|-.+|+++.||.++||+.-+.- ....++ .+.
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 621 1 2233456777888999999999 46689999999999999874432 222232 356
Q ss_pred CCEEEEEEcCCC--CeEEEEEccCCC-----CeEEEEECCCCc-eeE---EE-cCCCCeEEEEEccCCC----EEEEEEe
Q psy10114 682 AAVKAIAWSPHH--HGLLASGGGTAD-----RCIRFWNTLTGQ-PMQ---CV-DTGSQVCNLAWSKHSS----ELVSTHG 745 (819)
Q Consensus 682 ~~VtsLafSPdg--~~LLaSGgGs~D-----gtIrIWDl~tg~-~v~---~l-~~~s~V~sLafSpdg~----~LastsG 745 (819)
.+..|+.|+|.. ..+++.|+ .+ +.+.||....+. .-. ++ ++..+|..++|.|+-. .+++ +
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs--~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAv--A 245 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGS--DEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAV--A 245 (361)
T ss_pred CcceEEeeccccccCceEEEEc--ccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEE--e
Confidence 677899998743 34666664 22 378888766543 222 22 5788999999999632 3444 6
Q ss_pred cCCCeEEEEECCC--------------------CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 746 YSQNQILVWKYPT--------------------LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 746 ssDg~I~IWDl~s--------------------~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
..|| |+||++.. -+.+..+.+|.+.|..+.|+-.|..|++.|.||.||+|...
T Consensus 246 ~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 246 TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 7888 99999862 13455677899999999999999999999999999999764
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=180.52 Aligned_cols=220 Identities=25% Similarity=0.370 Sum_probs=177.4
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCce------------EE---EEEecCCCCeEEEEe---CCceeeec
Q psy10114 553 ADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAK------------QV---HKLVGHTARVGALAW---NGDMLSSG 613 (819)
Q Consensus 553 ~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk------------~i---~tl~gHs~~V~sLaw---ng~~LaSG 613 (819)
.|.+.|+++...+ .|+++++|+.||.|.+||++... ++ ..-.+|.-.|.++.| +...+.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 4789999999987 68999999999999999997542 11 011368888999999 67799999
Q ss_pred cCCCeEEEEECCCCCccceEEEecccCCeEEEEECC---CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEc
Q psy10114 614 SRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP---DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWS 690 (819)
Q Consensus 614 S~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp---dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafS 690 (819)
+.|.++++||..+.+..... .-.+.|.+-++|| ...++|+|..|-+|++.|+.+|....++.+|.+.|.++.|+
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F---~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Ws 197 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDF---KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWS 197 (397)
T ss_pred cccceEEEeecccceeeEEe---ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEec
Confidence 99999999999986533222 2346788888888 34578999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE---EEEEec
Q psy10114 691 PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ---VAKLTG 767 (819)
Q Consensus 691 Pdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~---l~sl~g 767 (819)
|..++++++|+ .||.|++||++... |..++.|..+++. +..-.+
T Consensus 198 p~~e~vLatgs--aDg~irlWDiRras-------------------------------gcf~~lD~hn~k~~p~~~~n~a 244 (397)
T KOG4283|consen 198 PSSEWVLATGS--ADGAIRLWDIRRAS-------------------------------GCFRVLDQHNTKRPPILKTNTA 244 (397)
T ss_pred cCceeEEEecC--CCceEEEEEeeccc-------------------------------ceeEEeecccCccCcccccccc
Confidence 99999999987 99999999987531 2233333333222 223447
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecccc
Q psy10114 768 HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 768 H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
|.+.|.+++|+.||.++++++.|..+++|+..+++...++.
T Consensus 245 h~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~ 285 (397)
T KOG4283|consen 245 HYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREF 285 (397)
T ss_pred ccceeeeeeecccchhhhhccCccceEEeecccCccccccc
Confidence 99999999999999999999999999999999987765543
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.7e-18 Score=176.73 Aligned_cols=277 Identities=15% Similarity=0.233 Sum_probs=212.5
Q ss_pred EEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 517 NLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 517 ~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
.++.|+ |..++.|+.+|.|.|||..|....+ .+.+|..+|+|++||+||+.|++++.|..|.+||+.+|.+++.+.
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar--~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDTFRIAR--MLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEccccchhh--hhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 445555 7889999999999999999987655 467899999999999999999999999999999999999888876
Q ss_pred cCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecc---cCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 595 GHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGH---RQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 595 gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH---~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
..++|+...|. .+..++.-.+..-.+-++..+.... ...... ...-.+..|.+.|+++++|...|.+.++|.
T Consensus 105 -f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~-Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a 182 (405)
T KOG1273|consen 105 -FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSV-LPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA 182 (405)
T ss_pred -ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceee-ccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence 46788888883 3444444444444445554432111 111100 111223358899999999999999999999
Q ss_pred CCCceeEEEecCC-CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-------Ccee--EEE---cCCCCeEEEEEcc
Q psy10114 669 HSMSPLQTYTEHL-AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-------GQPM--QCV---DTGSQVCNLAWSK 735 (819)
Q Consensus 669 ~t~~~i~t~~~h~-~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-------g~~v--~~l---~~~s~V~sLafSp 735 (819)
.+.+++..++... .+|+.+.++..|..++.-. .|+.||.|+++. +++. +++ -...+-.+++||.
T Consensus 183 ~t~e~vas~rits~~~IK~I~~s~~g~~liiNt---sDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~ 259 (405)
T KOG1273|consen 183 ETLECVASFRITSVQAIKQIIVSRKGRFLIINT---SDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSG 259 (405)
T ss_pred chheeeeeeeechheeeeEEEEeccCcEEEEec---CCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecC
Confidence 9999999888665 8899999999999887754 799999999863 1111 111 1234456789999
Q ss_pred CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC-CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS-YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~-~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+|.++++++ .....++||....|..++.+.|.. .....+.|+|-...+++- ..|.+++|.....+
T Consensus 260 dgeYv~a~s-~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~e 325 (405)
T KOG1273|consen 260 DGEYVCAGS-ARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQVE 325 (405)
T ss_pred CccEEEecc-ccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeeccc
Confidence 999999864 567789999999999999999887 567889999988888877 67899999986543
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-17 Score=175.11 Aligned_cols=250 Identities=18% Similarity=0.249 Sum_probs=197.3
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCC--EEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN--LVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~--~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
..+.+++-++.++++||.|.+|+|||...... +..+-.|.+.|+++.|.+.-. .|++|+.||.|.+|+....+++.
T Consensus 44 ~sitavAVs~~~~aSGssDetI~IYDm~k~~q--lg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~ 121 (362)
T KOG0294|consen 44 GSITALAVSGPYVASGSSDETIHIYDMRKRKQ--LGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLK 121 (362)
T ss_pred cceeEEEecceeEeccCCCCcEEEEeccchhh--hcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEee
Confidence 35778888999999999999999999987643 345667899999999998764 99999999999999999999999
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
++++|.+.|+.++. ++.+-++.+.|+.++.||+-.++...+..+. ..-+.+.|+|.|.+++.++.+ .|-+|.+.
T Consensus 122 slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~---~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d 197 (362)
T KOG0294|consen 122 SLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK---NKATLVSWSPQGDHFVVSGRN-KIDIYQLD 197 (362)
T ss_pred eecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC---CcceeeEEcCCCCEEEEEecc-EEEEEecc
Confidence 99999999999999 5778889999999999999887755444443 233448999999999988875 78999998
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEE--ccCCCEEEEEEec
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAW--SKHSSELVSTHGY 746 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLaf--Spdg~~LastsGs 746 (819)
+.+....+.. +..+.++.|...+ .+++|+ .|+.|++||..++.+...+ .|...|-.+.+ .|++.++++ .+
T Consensus 198 ~A~v~~~i~~-~~r~l~~~~l~~~--~L~vG~--d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvT--aS 270 (362)
T KOG0294|consen 198 NASVFREIEN-PKRILCATFLDGS--ELLVGG--DNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVT--AS 270 (362)
T ss_pred cHhHhhhhhc-cccceeeeecCCc--eEEEec--CCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEE--ec
Confidence 7766555443 3456666665443 355555 7999999999988877766 57888988874 345667777 67
Q ss_pred CCCeEEEEECCCC-----cEEEEEecCCCCEEEEEE
Q psy10114 747 SQNQILVWKYPTL-----TQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 747 sDg~I~IWDl~s~-----k~l~sl~gH~~~VtsLaf 777 (819)
+||.|++||++.. +++..+.. ..+++|+..
T Consensus 271 SDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 271 SDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred cCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 9999999999765 44555443 456666654
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=189.85 Aligned_cols=215 Identities=18% Similarity=0.286 Sum_probs=169.7
Q ss_pred EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccc--eE-EEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 590 VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQS--ER-RLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 590 i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~--v~-~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
...+++|+..|.++++ +|-.+++||-|-.|++||+....... .+ ........|.++.|++.|..|++.+.....+
T Consensus 160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqak 239 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAK 239 (641)
T ss_pred eEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCccee
Confidence 4467788999999999 57799999999999999998654211 11 1223456799999999999999999999999
Q ss_pred EEECCCCceeE------------EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-eEEEcC------C
Q psy10114 665 VWNLHSMSPLQ------------TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-MQCVDT------G 725 (819)
Q Consensus 665 IWDl~t~~~i~------------t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-v~~l~~------~ 725 (819)
++|....+... .-++|.+.+++.+|+|+.+..+.+++ .||++|+||+.+.+. .+.+.+ .
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s--~DgtlRiWdv~~~k~q~qVik~k~~~g~R 317 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCS--YDGTLRIWDVNNTKSQLQVIKTKPAGGKR 317 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEec--CCCcEEEEecCCchhheeEEeeccCCCcc
Confidence 99965443322 22479999999999999998888887 999999999987543 333322 2
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE---EEEEecCCC--CEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ---VAKLTGHSY--RVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~---l~sl~gH~~--~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
-.++.++|+++|+.+++ |..||.|.+|+..+... ...-.+|.. .|++++||+||++|++-+.|+++++||+..
T Consensus 318 v~~tsC~~nrdg~~iAa--gc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 318 VPVTSCAWNRDGKLIAA--GCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred cCceeeecCCCcchhhh--cccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 35899999999999888 88999999999865432 233357877 899999999999999999999999999987
Q ss_pred Cceecccc
Q psy10114 801 KVRSQRES 808 (819)
Q Consensus 801 ~~~~~k~~ 808 (819)
.++.....
T Consensus 396 ~kkpL~~~ 403 (641)
T KOG0772|consen 396 FKKPLNVR 403 (641)
T ss_pred cccchhhh
Confidence 66544433
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-15 Score=161.15 Aligned_cols=275 Identities=31% Similarity=0.526 Sum_probs=215.3
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC-CCeEEEEE-cCCCC-EEEEEec-CceEEEeecCC-ceEEEEE
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG-NSVTSVAW-NERGN-LVAVGTH-HGYVQVWDVSV-AKQVHKL 593 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~-~~VtsLaf-SpdG~-~LAsGs~-DGtI~IWDl~t-gk~i~tl 593 (819)
+..++..++.++.++.+.+|+...+. .....+.... ..+..+.+ ++++. .++..+. |+.+.+||... ......+
T Consensus 73 ~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 151 (466)
T COG2319 73 FSPDGELLLSGSSDGTIKLWDLDNGE-KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTL 151 (466)
T ss_pred ECCCCcEEEEecCCCcEEEEEcCCCc-eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEE
Confidence 33345677888889999999998875 1122333322 46777777 88887 5555444 99999999998 8889999
Q ss_pred ecCCCCeEEEEe--CCceeeeccC-CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EEEEEECCCeEEEEECC
Q psy10114 594 VGHTARVGALAW--NGDMLSSGSR-DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YLASGGNDNRLYVWNLH 669 (819)
Q Consensus 594 ~gHs~~V~sLaw--ng~~LaSGS~-DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~LaSGS~DGtI~IWDl~ 669 (819)
..|...|.+++| ++..+++++. |+.+++|+..... ....+.+|...|.+++|+|++. .+++++.|+.|.+||..
T Consensus 152 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~ 229 (466)
T COG2319 152 EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK--PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS 229 (466)
T ss_pred ecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCc--eEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence 999999999999 4557888875 9999999998743 4567777999999999999998 55555999999999998
Q ss_pred CCceeE-EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-eEEE-cCCCCeEEEEEccCCCEEEEEEec
Q psy10114 670 SMSPLQ-TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-MQCV-DTGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 670 t~~~i~-t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-v~~l-~~~s~V~sLafSpdg~~LastsGs 746 (819)
.+..+. .+..|...+ ...|++++..++ +++ .|+.+++||...... .... .+...+.++.|+|++..+++ ++
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~ 303 (466)
T COG2319 230 TGKLLRSTLSGHSDSV-VSSFSPDGSLLA-SGS--SDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS--GS 303 (466)
T ss_pred CCcEEeeecCCCCcce-eEeECCCCCEEE-Eec--CCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEE--ee
Confidence 888777 688887775 448999995444 444 899999999987664 4443 45678999999998888888 45
Q ss_pred CCCeEEEEECCCCcEEEEEe--cCCCCEEEEEEecCCCEEEEE-eCCCcEEEEECCCCc
Q psy10114 747 SQNQILVWKYPTLTQVAKLT--GHSYRVLYLAMSPDGEAIVTG-AGDETLRFWNVFSKV 802 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl~--gH~~~VtsLafSpDG~~LaSG-S~DGtIrIWdl~s~~ 802 (819)
.|+.+.+||..+........ .|...+..+.+.+++..++.+ ..|+.+++|++....
T Consensus 304 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 304 SDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred CCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence 56889999998888777766 888889999994333566665 688999999998876
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=185.33 Aligned_cols=235 Identities=20% Similarity=0.387 Sum_probs=188.2
Q ss_pred CCeEEEEECCCeEEEEEcCCCc-eEEEEe------------------ccCCCCCeEEEEEcCC-CCEEEEEecCceEEEe
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQ-VTRLCD------------------LSADGNSVTSVAWNER-GNLVAVGTHHGYVQVW 582 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~-~~~l~~------------------l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IW 582 (819)
|++++.|+.+..|.|||+.-.. ...... -.+|++.|.+++|+.. .+.||+|+.|.+|++|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW 271 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW 271 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence 3578888899999999975211 111111 2368888889999875 4689999999999999
Q ss_pred ecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC-CCEEEEEE
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGG 658 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS 658 (819)
|+.++++..++..|...|.+++|+ +..|++|+.|++|.+.|.+..... ...-.-.+.|-.++|.|. ...+++++
T Consensus 272 D~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s--~~~wk~~g~VEkv~w~~~se~~f~~~t 349 (463)
T KOG0270|consen 272 DVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNS--GKEWKFDGEVEKVAWDPHSENSFFVST 349 (463)
T ss_pred EcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcccc--CceEEeccceEEEEecCCCceeEEEec
Confidence 999999999999999999999994 679999999999999999964422 122223568999999984 45678889
Q ss_pred CCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEc
Q psy10114 659 NDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWS 734 (819)
Q Consensus 659 ~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafS 734 (819)
.||+|+-+|+|+. +++.+++.|.+.|.++++++....++++++ .|+.+++|++....+.....+ -+...|.++.
T Consensus 350 ddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s--~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~ 427 (463)
T KOG0270|consen 350 DDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTAS--TDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALD 427 (463)
T ss_pred CCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeecc--ccceEEEEeecCCCCcccccccccccceeecccC
Confidence 9999999999875 899999999999999999999999999976 899999999986554332222 1337788888
Q ss_pred cCCCEEEEEEecCCCeEEEEECCCCcEE
Q psy10114 735 KHSSELVSTHGYSQNQILVWKYPTLTQV 762 (819)
Q Consensus 735 pdg~~LastsGssDg~I~IWDl~s~k~l 762 (819)
|+-...++. |+..+.+++||+.+...+
T Consensus 428 ~~~a~~la~-GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 428 PDVAFTLAF-GGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred CCcceEEEe-cCccceEEEeecccChhH
Confidence 888887776 567779999999876554
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-17 Score=186.76 Aligned_cols=282 Identities=19% Similarity=0.283 Sum_probs=215.8
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCc-eEEEEeccCCCCCeEEEEEcCC-----------CCEEEEEecCceEEEeecCC
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQ-VTRLCDLSADGNSVTSVAWNER-----------GNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~-~~~l~~l~~h~~~VtsLafSpd-----------G~~LAsGs~DGtI~IWDl~t 586 (819)
++...+.+..+-.|..+++||+.+-+ +.+...+--|...|+++.--|- ...+.+++.||+|++||++.
T Consensus 332 Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ 411 (1080)
T KOG1408|consen 332 FDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAF 411 (1080)
T ss_pred ecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeeccc
Confidence 33335678899999999999997643 3344445557777777765541 13588999999999999975
Q ss_pred ce---EEE----------------------------------EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 587 AK---QVH----------------------------------KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 587 gk---~i~----------------------------------tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
+. ..+ ..-+..-.+.+++. +|..|++|..-|+++++|+..-
T Consensus 412 ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l 491 (1080)
T KOG1408|consen 412 CTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQEL 491 (1080)
T ss_pred ccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhh
Confidence 31 100 00012335677777 6889999999999999999875
Q ss_pred CccceEEEecccCCeEEEEECC---CCCEEEEEECCCeEEEEECC-CCceeEEEecCCCCEEEEEEcCCC--CeEEEEEc
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSP---DNQYLASGGNDNRLYVWNLH-SMSPLQTYTEHLAAVKAIAWSPHH--HGLLASGG 701 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSp---dg~~LaSGS~DGtI~IWDl~-t~~~i~t~~~h~~~VtsLafSPdg--~~LLaSGg 701 (819)
+ ....+..|..+|.|+.++. ..++||+++.|.-|.|+|+. +..+++++.+|...|+++.|--.| ..++.+|
T Consensus 492 ~--~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscG- 568 (1080)
T KOG1408|consen 492 E--YTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCG- 568 (1080)
T ss_pred h--hhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEecc-
Confidence 5 4567889999999999986 35689999999999999985 456788999999999999998766 4444444
Q ss_pred cCCCCeEEEEECCC---CceeEEE---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec---CCCCE
Q psy10114 702 GTADRCIRFWNTLT---GQPMQCV---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG---HSYRV 772 (819)
Q Consensus 702 Gs~DgtIrIWDl~t---g~~v~~l---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g---H~~~V 772 (819)
.|+.|.+=-.+. |.....- -....+..++..|..+++++ +..|..|+|||+.++++.+.+++ |++..
T Consensus 569 --ADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t--~cQDrnirif~i~sgKq~k~FKgs~~~eG~l 644 (1080)
T KOG1408|consen 569 --ADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVT--VCQDRNIRIFDIESGKQVKSFKGSRDHEGDL 644 (1080)
T ss_pred --CchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEE--EecccceEEEeccccceeeeecccccCCCce
Confidence 688876533221 2211111 12356889999999999999 77999999999999999999975 66788
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 773 LYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 773 tsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
..+...|.|-||++.+.|.++.++|..++++..+.
T Consensus 645 IKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m 679 (1080)
T KOG1408|consen 645 IKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM 679 (1080)
T ss_pred EEEEECCCccEEEEeecCCceEEEEeccchhhhhh
Confidence 89999999999999999999999999999876543
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.2e-17 Score=182.71 Aligned_cols=241 Identities=20% Similarity=0.375 Sum_probs=202.6
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-EEEEEecC-CCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccc
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-QVHKLVGH-TARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-~i~tl~gH-s~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~ 631 (819)
..+|+++|++.+.+.||++-.||.|.||++..+= +...+.++ ...|.+++|. +..|++.+.+|.|.-||+.+.+.
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~-- 102 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQ-- 102 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCce--
Confidence 5789999999999999999999999999998753 34455554 5679999995 88999999999999999998763
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE--EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ--TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~--t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
...+....+.|.+++.+|.+..++.|++||.+..++...++... .+....+.|.+++|+|++..++. |+.||.|+
T Consensus 103 ~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~---Gs~Dg~Ir 179 (691)
T KOG2048|consen 103 KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAG---GSIDGVIR 179 (691)
T ss_pred eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEe---cccCceEE
Confidence 46667778899999999999999999999988888887776543 34455789999999999986654 45999999
Q ss_pred EEECCCCceeEEEc---------CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 710 FWNTLTGQPMQCVD---------TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 710 IWDl~tg~~v~~l~---------~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
+||..++..+.... ...-|+++.+-.++ .+++ |++.|.|.+||...++.+.+...|.+.|.+++.+++
T Consensus 180 iwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~s--gDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~ 256 (691)
T KOG2048|consen 180 IWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIAS--GDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADN 256 (691)
T ss_pred EEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEE--ecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCC
Confidence 99999998876321 11237788887555 4666 899999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCce
Q psy10114 781 GEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+.++++++.|+.|.-+...+++.
T Consensus 257 ~d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 257 EDRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred CCeEEEccCCCceEEEEecCCcc
Confidence 99999999999999998877654
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.4e-18 Score=184.26 Aligned_cols=271 Identities=16% Similarity=0.208 Sum_probs=211.5
Q ss_pred eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE--EecCceEEEeecCCc--e--EEEEEecCCC
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV--GTHHGYVQVWDVSVA--K--QVHKLVGHTA 598 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs--Gs~DGtI~IWDl~tg--k--~i~tl~gHs~ 598 (819)
++.+++.+..+++||+...+......-......+.++.|+.... |++ .+.|..+++|.-... + .+....+.
T Consensus 4 Nl~~aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd-- 80 (673)
T KOG4378|consen 4 NLHVASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD-- 80 (673)
T ss_pred ceeeeccCCceEEeecccccCccccccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccc--
Confidence 46778888999999997654433221122234589999998764 444 456778888874322 1 12223333
Q ss_pred CeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE
Q psy10114 599 RVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 599 ~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t 676 (819)
.-.|++. -.-++++|+..+.|+|||++.. ...+.+++|...|+++.++-.+.+||+++..|.|.|..+.++.....
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~k--l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~ 158 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRAK--LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT 158 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHHH--HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc
Confidence 2334443 2468999999999999999953 35578899999999999999999999999999999999999988888
Q ss_pred EecC-CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 677 YTEH-LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 677 ~~~h-~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
|... ...|.-+.+++..+.++.+.+ .+|.|.+||+....+.... .|..+...++|+|....+++.. +.|..|.+
T Consensus 159 f~~~sgqsvRll~ys~skr~lL~~as--d~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV-G~Dkki~~ 235 (673)
T KOG4378|consen 159 FTIDSGQSVRLLRYSPSKRFLLSIAS--DKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV-GYDKKINI 235 (673)
T ss_pred eecCCCCeEEEeecccccceeeEeec--cCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe-cccceEEE
Confidence 8755 445668999999999999987 9999999999988877666 4678889999999888777764 47999999
Q ss_pred EECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 754 WDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
||..+.+....+. -..+...++|+++|.+|+.|...|.|..||+...+..
T Consensus 236 yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~P 285 (673)
T KOG4378|consen 236 YDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAP 285 (673)
T ss_pred eecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCC
Confidence 9999777766665 4567899999999999999999999999999876543
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=182.66 Aligned_cols=279 Identities=16% Similarity=0.245 Sum_probs=210.0
Q ss_pred eEEEEEecC----CeEEEEECCCeEEEEEcCCC--ceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCc
Q psy10114 515 YLNLVDWSS----QNVLSVGLGSCVYLWSACTS--QVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 515 yv~~ldwS~----~~LLa~g~Dg~V~LWd~~tg--~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tg 587 (819)
.+.++.|.+ +.+++|...|+|-+||+.+. ....+.-+..|.++|.++.|+|.. ..+++.+.||+|+.-|++.+
T Consensus 188 Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~ 267 (498)
T KOG4328|consen 188 RITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGN 267 (498)
T ss_pred ceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecch
Confidence 356677775 34777788899999999633 233455677899999999999954 78999999999999999876
Q ss_pred eE--EEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCe
Q psy10114 588 KQ--VHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNR 662 (819)
Q Consensus 588 k~--i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGt 662 (819)
.. +.........+.++.|+ ...++.|..=|...+||.+++.. ....+..|...|++++++|.. .++|++|.|++
T Consensus 268 i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s-~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T 346 (498)
T KOG4328|consen 268 ISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS-EYENLRLHKKKITSVALNPVCPWFLATASLDQT 346 (498)
T ss_pred hhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc-cchhhhhhhcccceeecCCCCchheeecccCcc
Confidence 43 33333345556677773 33556666666999999999774 345677788999999999954 57899999999
Q ss_pred EEEEECCCCc----eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC----CCCceeEEEcCCCC------e
Q psy10114 663 LYVWNLHSMS----PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT----LTGQPMQCVDTGSQ------V 728 (819)
Q Consensus 663 I~IWDl~t~~----~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl----~tg~~v~~l~~~s~------V 728 (819)
++|||++... ++.....|...|.+..|||.+..+++++ .|..|+|||. ....+...+.|... .
T Consensus 347 ~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~---~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~ 423 (498)
T KOG4328|consen 347 AKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTC---QDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTP 423 (498)
T ss_pred eeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeec---cCCceEEeecccccccCCccceeeccCcccccccc
Confidence 9999998643 2334457999999999999999877776 7999999998 34455555654322 3
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC-CEEE-EEEecCCCEEEE-EeCCCcEEEEECC
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY-RVLY-LAMSPDGEAIVT-GAGDETLRFWNVF 799 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~-~Vts-LafSpDG~~LaS-GS~DGtIrIWdl~ 799 (819)
...+|.|+...+++ |..-..|-|+|-..++.+.++..... .|.+ ..|+|-+..+++ |+..|.|.+|--+
T Consensus 424 fKA~W~P~~~li~v--g~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 424 FKAAWDPDYNLIVV--GRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred hhheeCCCccEEEE--eccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence 45789999998888 77788899999888887888754433 4544 479998875555 4557888888644
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-16 Score=174.57 Aligned_cols=278 Identities=17% Similarity=0.237 Sum_probs=214.0
Q ss_pred eEEEEEecC----CeEEEEE--CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce
Q psy10114 515 YLNLVDWSS----QNVLSVG--LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK 588 (819)
Q Consensus 515 yv~~ldwS~----~~LLa~g--~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk 588 (819)
-+.+++|+. ..+++.. .+..+.+||.+.+... ...+..++.|...+|+|.+.-+++....|.+..|+.+.+.
T Consensus 156 GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~--~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~ 233 (626)
T KOG2106|consen 156 GVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKL--GPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGS 233 (626)
T ss_pred cceeeeecccCCCceEEEecCCCccccchhhchhhhcc--CcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCc
Confidence 466777773 3455543 3455899998766432 2444456789999999988766666677899999999886
Q ss_pred EEEE---EecC-CCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 589 QVHK---LVGH-TARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 589 ~i~t---l~gH-s~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
..++ ++.+ ..-|.|++|. +..+++|..+|.|.||+..+.. ..+....|.+.|.+++.-.+|.++ +|+.|..|
T Consensus 234 l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~--~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki 310 (626)
T KOG2106|consen 234 LVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNR--ISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKI 310 (626)
T ss_pred eEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCce--EEeEeeecCCceEEEEEecCccEe-ecCccceE
Confidence 5544 3333 3679999994 4578999999999999997755 334445999999999999998755 59999999
Q ss_pred EEEECCCCc-----------ee-----------------------------EEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 664 YVWNLHSMS-----------PL-----------------------------QTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 664 ~IWDl~t~~-----------~i-----------------------------~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
..||-.-.+ ++ ....+|......++.+|+...++++|
T Consensus 311 ~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~g--- 387 (626)
T KOG2106|consen 311 ILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCG--- 387 (626)
T ss_pred EeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeecc---
Confidence 999931100 00 11235667788899999988776665
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~ 783 (819)
.|+.+++|+ ..+++.+.....+..++.|+|.| .+++ |...|...+.|.++...+..-.. ..+++.++|+|+|.+
T Consensus 388 qdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~--Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~ 461 (626)
T KOG2106|consen 388 QDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAV--GTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAF 461 (626)
T ss_pred CcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEE--eeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCE
Confidence 899999999 67777777888999999999999 7777 88999999999998655554444 889999999999999
Q ss_pred EEEEeCCCcEEEEECCCCceecc
Q psy10114 784 IVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
||.|+.|+.|++|.+....+...
T Consensus 462 lAvgs~d~~iyiy~Vs~~g~~y~ 484 (626)
T KOG2106|consen 462 LAVGSHDNHIYIYRVSANGRKYS 484 (626)
T ss_pred EEEecCCCeEEEEEECCCCcEEE
Confidence 99999999999999987655443
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.6e-18 Score=180.60 Aligned_cols=194 Identities=23% Similarity=0.424 Sum_probs=162.3
Q ss_pred CCceeeeccCCCeEEEEECCCC--------------CccceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCC
Q psy10114 606 NGDMLSSGSRDRMILQRDVRTP--------------NSQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 606 ng~~LaSGS~DGtI~IWDi~t~--------------~~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t 670 (819)
+..+.++-+..|.|.|||+... +...+.++.+|.++=.+++|||- ...|++|..-+.|++|...+
T Consensus 164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~ 243 (440)
T KOG0302|consen 164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST 243 (440)
T ss_pred CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence 3446677788899999988532 23456788999999999999993 23588888888999999987
Q ss_pred Cce---eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC---ceeEEEcCCCCeEEEEEccCCCEEEEEE
Q psy10114 671 MSP---LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG---QPMQCVDTGSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 671 ~~~---i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg---~~v~~l~~~s~V~sLafSpdg~~Lasts 744 (819)
+.= ...|.+|...|..++|||....++++|+ .||+|+|||++.+ .++..-.+++.|+.+.|+.+...|++
T Consensus 244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS--~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLas-- 319 (440)
T KOG0302|consen 244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCS--CDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLAS-- 319 (440)
T ss_pred CceeecCccccccccchhhhccCCccCceEEeee--cCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeee--
Confidence 652 3446679999999999999999999987 9999999999998 45555678889999999999887777
Q ss_pred ecCCCeEEEEECC---CCcEEEEEecCCCCEEEEEEecC-CCEEEEEeCCCcEEEEECCCCce
Q psy10114 745 GYSQNQILVWKYP---TLTQVAKLTGHSYRVLYLAMSPD-GEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 745 GssDg~I~IWDl~---s~k~l~sl~gH~~~VtsLafSpD-G~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
|+.||.++|||++ .+++++.++-|..+|+++.|+|. ...|++++.|.+|.+||+.-...
T Consensus 320 G~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D 382 (440)
T KOG0302|consen 320 GGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD 382 (440)
T ss_pred cCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence 9999999999997 46789999999999999999984 56788889999999999975544
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-15 Score=156.98 Aligned_cols=278 Identities=30% Similarity=0.578 Sum_probs=218.5
Q ss_pred eEEEEEecC--CeEEEEEC-CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEE
Q psy10114 515 YLNLVDWSS--QNVLSVGL-GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~-Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i 590 (819)
.+..+.+++ ..+++++. ++.+++|+..++.... .+.+|...|.+++|+|++. .+++++.|+.|++||...++.+
T Consensus 157 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~ 234 (466)
T COG2319 157 SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLS--TLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL 234 (466)
T ss_pred cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEE--eeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEE
Confidence 344566664 44666664 9999999998855543 4556889999999999998 5555599999999999888888
Q ss_pred E-EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 591 H-KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 591 ~-tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
. .+.+|...+ ...| ++..+++++.|+.+++||.+.... ......+|...+.++.|+|++..+++++.|+.+.+||
T Consensus 235 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~ 312 (466)
T COG2319 235 RSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS-LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWD 312 (466)
T ss_pred eeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc-EEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 8 688888874 3355 566888999999999999987664 2333368899999999999889898899999999999
Q ss_pred CCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 668 LHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 668 l~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
.++........ .|...+..+.+.+++..+..++. .|+.+.+|+...............+..+.+++ . ......+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 388 (466)
T COG2319 313 LETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGS--DDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSP-D-GRVVSSG 388 (466)
T ss_pred cCCCceEEEeeecccCCceEEEEECCCCCEEEEeec--CCCcEEeeecCCCceeEEecCCceEEEEEECC-C-CCEEEEe
Confidence 98887766665 78778999999433244555433 67999999999887444444444488999998 6 4444336
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
..++.+.+|+............+...+....+++++..+++++.++.+++|+...
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 389 STDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred cCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 7899999999998888777665547899999999999999999999999999988
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=176.22 Aligned_cols=216 Identities=23% Similarity=0.451 Sum_probs=172.2
Q ss_pred EEEEECCCeEEEEEcCC--------------CceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceE-
Q psy10114 526 VLSVGLGSCVYLWSACT--------------SQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQ- 589 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~t--------------g~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~- 589 (819)
.++-+..|.|+||+... .+...++++.+|.+.=.+++|||-. ..|++|..-+.|++|...+|.-
T Consensus 168 ~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~ 247 (440)
T KOG0302|consen 168 CASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWK 247 (440)
T ss_pred eeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCcee
Confidence 33445679999999742 2344567888899889999999933 3578888888999999988753
Q ss_pred --EEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 590 --VHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 590 --i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
...+.+|+..|-.++|+ .+.|+|||.||+|+|||++.+........+.|.+.|+.+.|+.+..+||+|+.||+++
T Consensus 248 vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~ 327 (440)
T KOG0302|consen 248 VDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLS 327 (440)
T ss_pred ecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEE
Confidence 23466899999999994 5699999999999999999986555666699999999999999888999999999999
Q ss_pred EEECCC---CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-----------e------EEE--
Q psy10114 665 VWNLHS---MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-----------M------QCV-- 722 (819)
Q Consensus 665 IWDl~t---~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-----------v------~~l-- 722 (819)
|||++. ++++..|+-|.++|++|.|+|.....++++| .|.+|.+||+....- + ..+
T Consensus 328 iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg--~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVH 405 (440)
T KOG0302|consen 328 IWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASG--EDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVH 405 (440)
T ss_pred EEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEecc--CCCcEEEEEeeccCChhhhccccccchhcCCceeEEEe
Confidence 999975 5688999999999999999999988888877 899999999864221 0 011
Q ss_pred cCCCCeEEEEEccCCCEEEEE
Q psy10114 723 DTGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~Last 743 (819)
..+..+..+.|+++-.-+++.
T Consensus 406 qGQke~KevhWH~QiPG~lvs 426 (440)
T KOG0302|consen 406 QGQKEVKEVHWHRQIPGLLVS 426 (440)
T ss_pred cchhHhhhheeccCCCCeEEE
Confidence 123446778888876555553
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-18 Score=203.37 Aligned_cols=246 Identities=22% Similarity=0.412 Sum_probs=194.9
Q ss_pred cCCcceEEEEEecC--C----eEEEEECCCeEEEEEcCC----CceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCce
Q psy10114 510 LQDDFYLNLVDWSS--Q----NVLSVGLGSCVYLWSACT----SQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGY 578 (819)
Q Consensus 510 l~dDfyv~~ldwS~--~----~LLa~g~Dg~V~LWd~~t----g~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGt 578 (819)
++.+.-.+.++|.. + .++.|..||.|.+||... ++...+.+...|.+.|..+.|++.+ +.||+|+.||.
T Consensus 61 ~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~ge 140 (1049)
T KOG0307|consen 61 LQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGE 140 (1049)
T ss_pred ccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCc
Confidence 33444566778873 2 366777889999999864 3334455677899999999999965 59999999999
Q ss_pred EEEeecCCceEEEEEe--cCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEeccc--CCeEEEEECCCC
Q psy10114 579 VQVWDVSVAKQVHKLV--GHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR--QEVCGLKWSPDN 651 (819)
Q Consensus 579 I~IWDl~tgk~i~tl~--gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~--~~VtsLafSpdg 651 (819)
|.|||+.+-+.-.+.. ...+.|.+++|| .++|++++.+|.+.|||++..+. +..+..+. ..+..++|+|++
T Consensus 141 I~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p--ii~ls~~~~~~~~S~l~WhP~~ 218 (1049)
T KOG0307|consen 141 ILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP--IIKLSDTPGRMHCSVLAWHPDH 218 (1049)
T ss_pred EEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc--ccccccCCCccceeeeeeCCCC
Confidence 9999998755444442 256789999996 56899999999999999998753 34444333 457899999976
Q ss_pred C-EEEEEECCC---eEEEEECCC-CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-C
Q psy10114 652 Q-YLASGGNDN---RLYVWNLHS-MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-G 725 (819)
Q Consensus 652 ~-~LaSGS~DG---tI~IWDl~t-~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~ 725 (819)
. .++++++|. .|.+||+|. ..+++.+++|...|.++.|++.+..+++++| .|+.|.+||.++|+.+..+.. +
T Consensus 219 aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsg--kD~~ii~wN~~tgEvl~~~p~~~ 296 (1049)
T KOG0307|consen 219 ATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSG--KDNRIICWNPNTGEVLGELPAQG 296 (1049)
T ss_pred ceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhccc--CCCCeeEecCCCceEeeecCCCC
Confidence 4 566666655 599999985 4578889999999999999999977888777 899999999999999999965 5
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k 760 (819)
+.+..+.|+|....++++ .+-||.|.|+.+.+..
T Consensus 297 nW~fdv~w~pr~P~~~A~-asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 297 NWCFDVQWCPRNPSVMAA-ASFDGKISIYSLQGTD 330 (1049)
T ss_pred cceeeeeecCCCcchhhh-heeccceeeeeeecCC
Confidence 669999999988755554 6789999999987543
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-17 Score=178.19 Aligned_cols=249 Identities=20% Similarity=0.261 Sum_probs=203.8
Q ss_pred CCCCCeEEEEEcCCC--CEEEEEecCceEEEeecCCc----eEEEEEecCCCCeEEEEe---CCceeeeccCCCeEEEEE
Q psy10114 553 ADGNSVTSVAWNERG--NLVAVGTHHGYVQVWDVSVA----KQVHKLVGHTARVGALAW---NGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 553 ~h~~~VtsLafSpdG--~~LAsGs~DGtI~IWDl~tg----k~i~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWD 623 (819)
.+.+.|++++|+|.. +++|+|+..|+|-+||+.+. ..+..+..|+++|.++.| |.+.+++.|.||+|+.-|
T Consensus 184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D 263 (498)
T KOG4328|consen 184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD 263 (498)
T ss_pred ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence 356899999999965 58999999999999999532 346677899999999999 466999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce-eEEEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP-LQTYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~-i~t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
++......+..+......++++.|+.+...++.|.+=|...+||.+++.. ...+.-|...|..++++|...+++++++
T Consensus 264 ~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s- 342 (498)
T KOG4328|consen 264 FEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATAS- 342 (498)
T ss_pred ecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecc-
Confidence 99876555555554566788899999888888888888999999997654 5566678889999999999999999987
Q ss_pred CCCCeEEEEECCCC--c---eeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC----CCcEEEEEecCCC---
Q psy10114 703 TADRCIRFWNTLTG--Q---PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP----TLTQVAKLTGHSY--- 770 (819)
Q Consensus 703 s~DgtIrIWDl~tg--~---~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~----s~k~l~sl~gH~~--- 770 (819)
.|++.+|||++.- + .+..+.|...|.+..|||.+..+++ .+.|+.|+|||.. ...+..++. |..
T Consensus 343 -~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~T--T~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~ 418 (498)
T KOG4328|consen 343 -LDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLT--TCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTG 418 (498)
T ss_pred -cCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEe--eccCCceEEeecccccccCCccceee-ccCccc
Confidence 9999999999862 2 2566788899999999999998888 5689999999983 344444444 322
Q ss_pred ---CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 771 ---RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 771 ---~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.....+|.||..++++|..-..|-|+|-..++...+
T Consensus 419 RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~e 457 (498)
T KOG4328|consen 419 RWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCE 457 (498)
T ss_pred ccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeee
Confidence 134578999999999999999999999888874433
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-18 Score=201.78 Aligned_cols=247 Identities=21% Similarity=0.428 Sum_probs=200.9
Q ss_pred CCCeEEEEEcCCCCE----EEEEecCceEEEeecCC---c---eEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEE
Q psy10114 555 GNSVTSVAWNERGNL----VAVGTHHGYVQVWDVSV---A---KQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQ 621 (819)
Q Consensus 555 ~~~VtsLafSpdG~~----LAsGs~DGtI~IWDl~t---g---k~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~I 621 (819)
......++|.+.|.. ||.|..||.|.+||... + ..+.+...|++.|..+.|| ++.|++|+.||.|.|
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i 143 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI 143 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence 467889999998765 89999999999999865 2 3456677899999999995 679999999999999
Q ss_pred EECCCCCccceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCceeEEEecCCC--CEEEEEEcCCCCeEEE
Q psy10114 622 RDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHSMSPLQTYTEHLA--AVKAIAWSPHHHGLLA 698 (819)
Q Consensus 622 WDi~t~~~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~--~VtsLafSPdg~~LLa 698 (819)
||+...+......-..-.++|.+++|+.. ...||+++.+|.+.|||++..+++..+..+.+ .+..++|+|++..-++
T Consensus 144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~ 223 (1049)
T KOG0307|consen 144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL 223 (1049)
T ss_pred eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence 99998664322222234678999999985 44688999999999999999999888877655 4788999999876665
Q ss_pred EEcc-CCCCeEEEEECCCC-ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEE
Q psy10114 699 SGGG-TADRCIRFWNTLTG-QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYL 775 (819)
Q Consensus 699 SGgG-s~DgtIrIWDl~tg-~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsL 775 (819)
++++ ...-.|.+||++.. .+++.+ .|...|.++.|++.+..++.+ .+.|++|.+|+.++++.+.++......+..+
T Consensus 224 ~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllS-sgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv 302 (1049)
T KOG0307|consen 224 VASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLS-SGKDNRIICWNPNTGEVLGELPAQGNWCFDV 302 (1049)
T ss_pred eecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhc-ccCCCCeeEecCCCceEeeecCCCCcceeee
Confidence 5542 23457999999864 455555 577889999999988555544 5689999999999999999999888899999
Q ss_pred EEecCCC-EEEEEeCCCcEEEEECCCCc
Q psy10114 776 AMSPDGE-AIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 776 afSpDG~-~LaSGS~DGtIrIWdl~s~~ 802 (819)
.|+|... .++.++-||.|.|+.+.+..
T Consensus 303 ~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 303 QWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eecCCCcchhhhheeccceeeeeeecCC
Confidence 9999665 78889999999999998765
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-15 Score=176.08 Aligned_cols=280 Identities=19% Similarity=0.354 Sum_probs=214.4
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceE---EEEeccCCCCCeEEEEEcCCC--CEEEEEecCceEEEeecCCceE
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVT---RLCDLSADGNSVTSVAWNERG--NLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~---~l~~l~~h~~~VtsLafSpdG--~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
.+..+..=|+.++++..++.+.+|+..+.+.. ++.-.+...+.|+++. +|.. +.++.|+.+|.+++|++.+++.
T Consensus 116 ~v~~l~~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~-HP~TYLNKIvvGs~~G~lql~Nvrt~K~ 194 (910)
T KOG1539|consen 116 KVHLLLPFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALL-HPSTYLNKIVVGSSQGRLQLWNVRTGKV 194 (910)
T ss_pred eEEEEeeecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEe-cchhheeeEEEeecCCcEEEEEeccCcE
Confidence 35556666899999999999999998874211 1111222234477764 5644 7899999999999999999999
Q ss_pred EEEEecCCCCeEEEEeCC--ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EEEEEECCCeEEEE
Q psy10114 590 VHKLVGHTARVGALAWNG--DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YLASGGNDNRLYVW 666 (819)
Q Consensus 590 i~tl~gHs~~V~sLawng--~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~LaSGS~DGtI~IW 666 (819)
+.+++++...|+++.-.+ +.++.|..+|+|.+++++.++ .+..++...+.|++++|..||+ .+|+|+..|.+.+|
T Consensus 195 v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dk--il~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~w 272 (910)
T KOG1539|consen 195 VYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDK--ILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFW 272 (910)
T ss_pred EEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCc--EEEEEEccccceeEEEeccCCCeeEEeccCCceEEEE
Confidence 999999999999998864 689999999999999999876 3466665569999999999998 56777777999999
Q ss_pred ECCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE--E-------------------------------
Q psy10114 667 NLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW--N------------------------------- 712 (819)
Q Consensus 667 Dl~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW--D------------------------------- 712 (819)
|++..+.+.... .|.+.|....|.|....++.++ .|+.+++| |
T Consensus 273 DLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~---~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ 349 (910)
T KOG1539|consen 273 DLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAG---ADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHF 349 (910)
T ss_pred EcCCCeeeeeeeccccCCcccceecCCCceEeecc---CCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEE
Confidence 998877655554 5666666666666555443333 34444433 2
Q ss_pred --------------C-----------------------------------------------------------------
Q psy10114 713 --------------T----------------------------------------------------------------- 713 (819)
Q Consensus 713 --------------l----------------------------------------------------------------- 713 (819)
+
T Consensus 350 ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~ 429 (910)
T KOG1539|consen 350 ILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNF 429 (910)
T ss_pred EEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEec
Confidence 1
Q ss_pred CCCce-eEEEcCC------CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE---ecCCCCEEEEEEecCCCE
Q psy10114 714 LTGQP-MQCVDTG------SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL---TGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 714 ~tg~~-v~~l~~~------s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl---~gH~~~VtsLafSpDG~~ 783 (819)
++... ...+++. ..+.+++.++.|++.+. |++.|.|.+|++.+|-...++ ..|.++|++++...-++.
T Consensus 430 ~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~I--G~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~ 507 (910)
T KOG1539|consen 430 RNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFI--GYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRL 507 (910)
T ss_pred cCcccccEEecCccccccCcceEEEEEeccCceEEE--eccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCce
Confidence 10000 0011111 45778899999999998 999999999999999998888 589999999999998999
Q ss_pred EEEEeCCCcEEEEECCCCc
Q psy10114 784 IVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~~ 802 (819)
+++++.||.+++||..++.
T Consensus 508 ~vsa~~~Gilkfw~f~~k~ 526 (910)
T KOG1539|consen 508 LVSAGADGILKFWDFKKKV 526 (910)
T ss_pred EEEccCcceEEEEecCCcc
Confidence 9999999999999998876
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=184.31 Aligned_cols=253 Identities=16% Similarity=0.233 Sum_probs=197.9
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC--------ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeE
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV--------AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMI 619 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t--------gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI 619 (819)
++..|.+.|++++|.+....|++++.||.+++|++++ -+++.++.+|.++|.|++. +++.+++|+-||+|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I 368 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI 368 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence 5566889999999999999999999999999999932 2578899999999999999 78899999999999
Q ss_pred EEEECCCCC--------ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC--CCCEEEEEE
Q psy10114 620 LQRDVRTPN--------SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH--LAAVKAIAW 689 (819)
Q Consensus 620 ~IWDi~t~~--------~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h--~~~VtsLaf 689 (819)
+.|++.... ......+.||.+.|+.+++|.....|++++.||+++.|+.....+ .+|... .+.-.++.+
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~ 447 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDR 447 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEee
Confidence 999654211 123467889999999999999999999999999999999877766 333321 222344555
Q ss_pred cCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC--------CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 690 SPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 690 SPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--------~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
-.......++.. .-+.-.+.|+..+..+..+.. ...+..+.+.|.+...++ +..|+.|+++|..+++.
T Consensus 448 ~ss~~a~~~~s~--~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~--~hed~~Ir~~dn~~~~~ 523 (577)
T KOG0642|consen 448 TSSRPAHSLASF--RFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFT--AHEDRSIRFFDNKTGKI 523 (577)
T ss_pred ccchhHhhhhhc--ccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEe--cccCCceeccccccccc
Confidence 433322222111 223333444555544444422 245788899999988888 77999999999999999
Q ss_pred EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+....+|...++++++.|+|-+|++|+.||.+++|++..+...+..
T Consensus 524 l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es 569 (577)
T KOG0642|consen 524 LHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLES 569 (577)
T ss_pred chheeeccceecceeecCCCceEEeecCCceeehhhccchheeecc
Confidence 9999999999999999999999999999999999999887766543
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-16 Score=176.53 Aligned_cols=283 Identities=18% Similarity=0.300 Sum_probs=222.8
Q ss_pred CcceEEEEEecCCeEEEEECCCeEEEEEcC-CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---
Q psy10114 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSAC-TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--- 587 (819)
Q Consensus 512 dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~-tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--- 587 (819)
..|+-..+..+++.+++-|..|..++|... .....+.....+|.+.|++++|+|.|.+|.+.+.|-+-+++-.-..
T Consensus 317 ~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~ 396 (764)
T KOG1063|consen 317 GGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQE 396 (764)
T ss_pred cceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccc
Confidence 456666666666779999999999999833 2334455567899999999999999999999999999999865411
Q ss_pred -eEEEEEecCCCCeEEEEe-C-CceeeeccCCCeEEEEECCCC-------------------------------------
Q psy10114 588 -KQVHKLVGHTARVGALAW-N-GDMLSSGSRDRMILQRDVRTP------------------------------------- 627 (819)
Q Consensus 588 -k~i~tl~gHs~~V~sLaw-n-g~~LaSGS~DGtI~IWDi~t~------------------------------------- 627 (819)
-.+..-+-|.-...|+++ + ...+++|...+.+++|+....
T Consensus 397 wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~ 476 (764)
T KOG1063|consen 397 WHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFP 476 (764)
T ss_pred eeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcc
Confidence 223334568888999999 6 558888888888898876321
Q ss_pred ------C-------------------------------ccceEEEecccCCeEEEEECCCCCEEEEEECCC-----eEEE
Q psy10114 628 ------N-------------------------------SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN-----RLYV 665 (819)
Q Consensus 628 ------~-------------------------------~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG-----tI~I 665 (819)
. ...+.++.||..+|.+++.+|+|+.+|+++... .|++
T Consensus 477 ~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~l 556 (764)
T KOG1063|consen 477 GETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRL 556 (764)
T ss_pred cccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEE
Confidence 0 011235668999999999999999999998654 4899
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee-E----EEcCCCCeEEEEEccCCCEE
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM-Q----CVDTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v-~----~l~~~s~V~sLafSpdg~~L 740 (819)
|+..+...++.+.+|.-.|+.++|||||+++++++ .|+++.+|....+... . .-.|..-|..+.|+|++.++
T Consensus 557 w~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvs---RDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F 633 (764)
T KOG1063|consen 557 WNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVS---RDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF 633 (764)
T ss_pred EeccchhhhheecccceEEEEEEECCCCcEEEEee---cCceEEeeeeecccchhhhhccccccceEEEEcccCccccee
Confidence 99999999999999999999999999999988876 7999999987543221 1 11355568999999999998
Q ss_pred EEEEecCCCeEEEEECCCC--cEEEE--EecCCCCEEEEEEec-----CCCEEEEEeCCCcEEEEECC
Q psy10114 741 VSTHGYSQNQILVWKYPTL--TQVAK--LTGHSYRVLYLAMSP-----DGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~--k~l~s--l~gH~~~VtsLafSp-----DG~~LaSGS~DGtIrIWdl~ 799 (819)
++ ++.|..|++|..... +.+.. ...+...|+.+++.+ .+..++.|-..|.|.+|+..
T Consensus 634 aT--aSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 634 AT--ASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred EE--ecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 88 789999999999877 44433 235788999999877 23377889999999999976
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.2e-16 Score=175.26 Aligned_cols=275 Identities=19% Similarity=0.322 Sum_probs=209.2
Q ss_pred EEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCC---EEEEEecCceEEEeecCCc--eEEEE
Q psy10114 518 LVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN---LVAVGTHHGYVQVWDVSVA--KQVHK 592 (819)
Q Consensus 518 ~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~---~LAsGs~DGtI~IWDl~tg--k~i~t 592 (819)
..+|....+++-|.+..|.+||..+. .....+.+|..+|+|+.|-|+.+ .+++|+.||.|.+|.++.. .++.+
T Consensus 19 v~sw~~~~~vafGa~~~Iav~dp~k~--~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~ 96 (764)
T KOG1063|consen 19 VSSWGPGGLVAFGAGPAIAVADPEKI--LIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYT 96 (764)
T ss_pred cccccccceEEecCCceEEEeCcccc--eeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEe
Confidence 35677788899999999999998776 33457899999999999999877 8999999999999999843 45666
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCC--------------------------------------------
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPN-------------------------------------------- 628 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~-------------------------------------------- 628 (819)
+++|...+.|+.-......+.+.|+.+.+||.+..+
T Consensus 97 ~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~ 176 (764)
T KOG1063|consen 97 IQGHCKECVCVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSS 176 (764)
T ss_pred ecCcceeEEEEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEecc
Confidence 777766666555433333333678888888874321
Q ss_pred ----ccceEEEecccCCeEEEEECCCCC---EEEEEECCCeEEEEECCCCc---------------------eeEE----
Q psy10114 629 ----SQSERRLVGHRQEVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMS---------------------PLQT---- 676 (819)
Q Consensus 629 ----~~~v~~l~gH~~~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~---------------------~i~t---- 676 (819)
...+..+.||.+.|.+++|...+. +||++|+|..|+||.+.-+. ....
T Consensus 177 ~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~ 256 (764)
T KOG1063|consen 177 SADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYR 256 (764)
T ss_pred CCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEE
Confidence 123456788999999999987444 89999999999999874221 1111
Q ss_pred ------EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--eeEEE-----c-CCCCeEEEEEccCCCEEEE
Q psy10114 677 ------YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--PMQCV-----D-TGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 677 ------~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l-----~-~~s~V~sLafSpdg~~Las 742 (819)
+.+|...|.++.|+|.+..+++++ .|+++.+|...+.. -+... . .........|+|+++.+++
T Consensus 257 is~eall~GHeDWV~sv~W~p~~~~LLSAS---aDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~ 333 (764)
T KOG1063|consen 257 ISFEALLMGHEDWVYSVWWHPEGLDLLSAS---ADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIA 333 (764)
T ss_pred EehhhhhcCcccceEEEEEccchhhheecc---cCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEE
Confidence 238999999999999997777654 79999999876542 22222 1 1234788999999988887
Q ss_pred EEecCCCeEEEEECCC---CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 743 THGYSQNQILVWKYPT---LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 743 tsGssDg~I~IWDl~s---~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
-+..|..++|...+ ..+...+.||.+.|.+++|+|.|.+|++.|.|.+-|++--.
T Consensus 334 --~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~w 391 (764)
T KOG1063|consen 334 --HGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW 391 (764)
T ss_pred --ecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccc
Confidence 55789999998332 23445667999999999999999999999999999998766
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=169.40 Aligned_cols=270 Identities=18% Similarity=0.279 Sum_probs=196.0
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC--CCCEEEEEecCceEEEeecCCceEEEEE--ecCC-C
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVSVAKQVHKL--VGHT-A 598 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~tgk~i~tl--~gHs-~ 598 (819)
+.++++-..|.|+++|..+++..+ .++++...++.++|.. ....+.+|+.||+|++||++.......+ .+++ .
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~--~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~ 118 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLE--EFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT 118 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhh--eecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC
Confidence 457777888999999999987654 6778888899999987 4678999999999999999877655444 3555 4
Q ss_pred CeEEEEe--CCceeeecc----CCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCC
Q psy10114 599 RVGALAW--NGDMLSSGS----RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 599 ~V~sLaw--ng~~LaSGS----~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~ 671 (819)
+..|++- +++.+++|. .|-.+.+||+|..+.....-...|.+.|+++.|+| +.+.|++||.||-|.++|++..
T Consensus 119 ~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 119 PFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred cceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 5667777 456777775 36789999999977534455678999999999999 5679999999999999999754
Q ss_pred c---eeEEEecCCCCEEEEEEcCCCC-eEEEEEccCCCCeEEEEECCCCceeEEEcCC-------------CCeEEEEEc
Q psy10114 672 S---PLQTYTEHLAAVKAIAWSPHHH-GLLASGGGTADRCIRFWNTLTGQPMQCVDTG-------------SQVCNLAWS 734 (819)
Q Consensus 672 ~---~i~t~~~h~~~VtsLafSPdg~-~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-------------s~V~sLafS 734 (819)
. .+...-.+...|..+.|..++- .+.+.. ...+..+|+++.+.+...+... ..+-.. .+
T Consensus 199 ~EeDaL~~viN~~sSI~~igw~~~~ykrI~clT---H~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~-~~ 274 (376)
T KOG1188|consen 199 NEEDALLHVINHGSSIHLIGWLSKKYKRIMCLT---HMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE-HS 274 (376)
T ss_pred cchhhHHHhhcccceeeeeeeecCCcceEEEEE---ccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec-cc
Confidence 3 2222234778899999998882 243332 7899999999988765444221 111121 22
Q ss_pred cCCCEEEEEEecCCCeEEEEECC------CCcEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 735 KHSSELVSTHGYSQNQILVWKYP------TLTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 735 pdg~~LastsGssDg~I~IWDl~------s~k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
|.+.-+..+.|...|...++-+. ..+.+..+.+ |..-|.++.|...+..+.||++||.+.+|...
T Consensus 275 ~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 275 PGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred CCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 33333333334445555554432 3455666776 67778999999899999999999999999964
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.2e-15 Score=161.43 Aligned_cols=269 Identities=12% Similarity=0.156 Sum_probs=180.4
Q ss_pred EEEEECCCeEEEEEcCC-CceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecC-CceE--EEEEecCCCCe
Q psy10114 526 VLSVGLGSCVYLWSACT-SQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVS-VAKQ--VHKLVGHTARV 600 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~-tgk~--i~tl~gHs~~V 600 (819)
+++.+.++.|++|+..+ ++...+..+. ..+....++++|++++|++++ .++.|.+|+++ +++. +.... ..+..
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p 82 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSP 82 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCc
Confidence 34456789999999964 5554444443 345678899999999987765 47889999987 3332 22222 23355
Q ss_pred EEEEeC--Cceeeecc-CCCeEEEEECCCCCcc--ceEEEecccCCeEEEEECCCCCEEEEE-ECCCeEEEEECCCCcee
Q psy10114 601 GALAWN--GDMLSSGS-RDRMILQRDVRTPNSQ--SERRLVGHRQEVCGLKWSPDNQYLASG-GNDNRLYVWNLHSMSPL 674 (819)
Q Consensus 601 ~sLawn--g~~LaSGS-~DGtI~IWDi~t~~~~--~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DGtI~IWDl~t~~~i 674 (819)
..++++ ++.+++++ .++.|.+||++..... ..... .+.....+++++|++++++++ ..++.|.+||+++...+
T Consensus 83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l 161 (330)
T PRK11028 83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQII-EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHL 161 (330)
T ss_pred eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeec-cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcc
Confidence 678884 66666655 4899999999743211 11222 233456778899999988655 45689999999763322
Q ss_pred EE-----Ee-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC--Cc--eeEEEcC-------CCCeEEEEEccCC
Q psy10114 675 QT-----YT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT--GQ--PMQCVDT-------GSQVCNLAWSKHS 737 (819)
Q Consensus 675 ~t-----~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t--g~--~v~~l~~-------~s~V~sLafSpdg 737 (819)
.. .. ........++|+|+|+.++++.. .+++|.+||+.. ++ .+..+.. ......+.++|++
T Consensus 162 ~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~--~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg 239 (330)
T PRK11028 162 VAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNE--LNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDG 239 (330)
T ss_pred cccCCCceecCCCCCCceEEECCCCCEEEEEec--CCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCC
Confidence 11 11 12334578999999998888764 589999999973 32 2333321 1123468899999
Q ss_pred CEEEEEEecCCCeEEEEECCCCcEEEEEecC---CCCEEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10114 738 SELVSTHGYSQNQILVWKYPTLTQVAKLTGH---SYRVLYLAMSPDGEAIVTGAG-DETLRFWNVFS 800 (819)
Q Consensus 738 ~~LastsGssDg~I~IWDl~s~k~l~sl~gH---~~~VtsLafSpDG~~LaSGS~-DGtIrIWdl~s 800 (819)
++++++ ...++.|.+|++.......++.++ ......++++|||++|+++.. +++|.+|+++.
T Consensus 240 ~~lyv~-~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 240 RHLYAC-DRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred CEEEEe-cCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 999984 345789999998644322222222 124567899999999998765 89999998863
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-16 Score=172.22 Aligned_cols=241 Identities=17% Similarity=0.284 Sum_probs=204.1
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecC--CceEEEEEecCCCCeEEEEe--CCc-eeeeccCCCeEEEEECCCCCc
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVS--VAKQVHKLVGHTARVGALAW--NGD-MLSSGSRDRMILQRDVRTPNS 629 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~--tgk~i~tl~gHs~~V~sLaw--ng~-~LaSGS~DGtI~IWDi~t~~~ 629 (819)
.+.|+++.|+|....+.+++.||+++||.++ ....++.+.-...+|.+..| +|. .+++++.....+.||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 4789999999999999999999999999875 34566777666788888888 677 899999999999999998876
Q ss_pred cceEEEeccc-CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeE
Q psy10114 630 QSERRLVGHR-QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCI 708 (819)
Q Consensus 630 ~~v~~l~gH~-~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtI 708 (819)
..+....++. ..+.....++++++||..|..|.|.+....+++.+.+++ -.+.|.+++|+.+++.++++|+ +|.|
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~---~GeV 368 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGG---TGEV 368 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcC---CceE
Confidence 6666666665 356778899999999999999999999999999988887 4788999999999999999874 8999
Q ss_pred EEEECCCCceeEEEcCCCCe--EEEEEccCCCEEEEEEecCCCeEEEEECCC------CcEEEEEecCCCCEEEEEEecC
Q psy10114 709 RFWNTLTGQPMQCVDTGSQV--CNLAWSKHSSELVSTHGYSQNQILVWKYPT------LTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 709 rIWDl~tg~~v~~l~~~s~V--~sLafSpdg~~LastsGssDg~I~IWDl~s------~k~l~sl~gH~~~VtsLafSpD 780 (819)
.+||++...++..+..++.| ++++.|+++.++++ |+..|.|.|||..+ .+++..+..-...|++++|++|
T Consensus 369 ~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~--GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d 446 (514)
T KOG2055|consen 369 YVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLAT--GSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHD 446 (514)
T ss_pred EEEecCCcceEEEEeecCccceeeeeecCCCceEEe--ccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcc
Confidence 99999999998888655554 67788899999999 99999999999653 4667777677788999999999
Q ss_pred CCEEEEEeC--CCcEEEEECCCC
Q psy10114 781 GEAIVTGAG--DETLRFWNVFSK 801 (819)
Q Consensus 781 G~~LaSGS~--DGtIrIWdl~s~ 801 (819)
++.||.+|. +..+|+-.+.+-
T Consensus 447 ~qiLAiaS~~~knalrLVHvPS~ 469 (514)
T KOG2055|consen 447 AQILAIASRVKKNALRLVHVPSC 469 (514)
T ss_pred hhhhhhhhhccccceEEEeccce
Confidence 999887765 667887766543
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=170.44 Aligned_cols=247 Identities=23% Similarity=0.373 Sum_probs=187.0
Q ss_pred CCCeEEEEEcCCCC-EEEEEecCceEEEeecCCc---------eEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEE
Q psy10114 555 GNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVA---------KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQR 622 (819)
Q Consensus 555 ~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tg---------k~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IW 622 (819)
..+|.++.|.+++. .+|+|+.|..|+||-++.+ +....+..|...|+++.|+ |+.|+||+.+|.|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 46899999998775 9999999999999987543 2345667899999999995 6699999999999999
Q ss_pred ECC--------C------CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEE
Q psy10114 623 DVR--------T------PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIA 688 (819)
Q Consensus 623 Di~--------t------~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLa 688 (819)
... + ......+.+.+|..+|..++|+|+++.+++|+.|+.+++||+..|+....+.+|..-|..++
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgva 172 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVA 172 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceee
Confidence 776 2 11233466788999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--------------------CC----CCeEEEEEccCCCEEEEEE
Q psy10114 689 WSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--------------------TG----SQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 689 fSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--------------------~~----s~V~sLafSpdg~~Lasts 744 (819)
|.|.++++..-+ .|+..+.+++...+.+.... ++ +-...++|+|+|..+++-+
T Consensus 173 wDpl~qyv~s~s---~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 173 WDPLNQYVASKS---SDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred cchhhhhhhhhc---cCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 999988766544 46666665554332221110 00 1123456666665555422
Q ss_pred e-------------------------------------------------------------------cCCCeEEEEECC
Q psy10114 745 G-------------------------------------------------------------------YSQNQILVWKYP 757 (819)
Q Consensus 745 G-------------------------------------------------------------------ssDg~I~IWDl~ 757 (819)
| ...+.|.+||..
T Consensus 250 g~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq 329 (434)
T KOG1009|consen 250 GLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQ 329 (434)
T ss_pred ceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEeccc
Confidence 1 123456666666
Q ss_pred CCcEEEEEe-cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 758 TLTQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 758 s~k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
+..++.... -|-..++.++|++||..++..|.||...+-.++..+.-
T Consensus 330 ~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 330 TLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred cccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence 655655443 37788999999999999999999999888777765543
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-16 Score=164.63 Aligned_cols=268 Identities=21% Similarity=0.325 Sum_probs=196.1
Q ss_pred eEEEEECCCeEEEEEcCCCceEE-EEec--cCCCCCeEEEEEcCC----CCEEEEEecCceEEEeecCCceEEEEEecCC
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVTR-LCDL--SADGNSVTSVAWNER----GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT 597 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~~-l~~l--~~h~~~VtsLafSpd----G~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs 597 (819)
.+++...++.+.+++....-..+ +... +.+.+....++|+-+ ..++|+|+.-|.|+|.|+.+++....+.+|.
T Consensus 56 ~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG 135 (385)
T KOG1034|consen 56 QVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHG 135 (385)
T ss_pred ceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccC
Confidence 45555556778888765432222 2222 235677888888753 3589999999999999999999999999999
Q ss_pred CCeEEEEe---CCceeeeccCCCeEEEEECCCCCccce-EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce
Q psy10114 598 ARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSE-RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP 673 (819)
Q Consensus 598 ~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v-~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~ 673 (819)
..|+.+.+ +++++++||.|.+|++|++++..+..+ .-..+|.++|.++.|+.+|.+++++|.|.++++|++...+.
T Consensus 136 ~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f 215 (385)
T KOG1034|consen 136 GSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEF 215 (385)
T ss_pred ccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHH
Confidence 99999999 467999999999999999999765322 23467999999999999999999999999999999973221
Q ss_pred ------e-------------------E---EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC-CCCceeE----
Q psy10114 674 ------L-------------------Q---TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT-LTGQPMQ---- 720 (819)
Q Consensus 674 ------i-------------------~---t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl-~tg~~v~---- 720 (819)
. . +-..|...|.|+.|-. ..++.-+ -++.|..|.. +-++.+.
T Consensus 216 ~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g--d~ilSks---cenaI~~w~pgkl~e~~~~vkp 290 (385)
T KOG1034|consen 216 KNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG--DFILSKS---CENAIVCWKPGKLEESIHNVKP 290 (385)
T ss_pred hhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHh--hheeecc---cCceEEEEecchhhhhhhccCC
Confidence 0 0 1123666777777764 4344433 5789999987 2222211
Q ss_pred ---------EEcC-CCCeE--EEEEccCCCEEEEEEecCCCeEEEEECCCCcEE--EEEe--cCCCCEEEEEEecCCCEE
Q psy10114 721 ---------CVDT-GSQVC--NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV--AKLT--GHSYRVLYLAMSPDGEAI 784 (819)
Q Consensus 721 ---------~l~~-~s~V~--sLafSpdg~~LastsGssDg~I~IWDl~s~k~l--~sl~--gH~~~VtsLafSpDG~~L 784 (819)
.++- ...+. ..+|.+-++.++. |...|.|.+||++..++. .++. .....|...+||.||..|
T Consensus 291 ~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~--gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~l 368 (385)
T KOG1034|consen 291 PESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL--GNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSIL 368 (385)
T ss_pred CccceeeeeEeccCccceEEEEEeecHHHHHHhh--ccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEE
Confidence 1111 12333 3456677888888 899999999999876652 2222 124569999999999999
Q ss_pred EEEeCCCcEEEEECC
Q psy10114 785 VTGAGDETLRFWNVF 799 (819)
Q Consensus 785 aSGS~DGtIrIWdl~ 799 (819)
+..++|++|.-||.-
T Consensus 369 v~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 369 VLVCDDGTVWRWDRV 383 (385)
T ss_pred EEEeCCCcEEEEEee
Confidence 999999999999853
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.3e-16 Score=178.17 Aligned_cols=263 Identities=22% Similarity=0.331 Sum_probs=199.9
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCceE--EEE----EecCCCCeEEEEe
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQ--VHK----LVGHTARVGALAW 605 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk~--i~t----l~gHs~~V~sLaw 605 (819)
+.+.+|+........ ..+. -...|+|++|+| +.+++|.|+.+|+|.+||+..+.. ... ...|...|..+.|
T Consensus 222 ~~~~vW~~~~p~~Pe-~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW 299 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPE-LVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW 299 (555)
T ss_pred ceEEEEecCCCCCce-EEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence 378999998762222 2232 257899999999 557888999999999999987755 222 2368999999999
Q ss_pred --C--CceeeeccCCCeEEEEECCCCCccceEEE---e-------cccCCeEEEEECC-CCCEEEEEECCCeEEEEECCC
Q psy10114 606 --N--GDMLSSGSRDRMILQRDVRTPNSQSERRL---V-------GHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 606 --n--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l---~-------gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t 670 (819)
+ +.-+++++.||.|..|+++.-........ . .-...+++++|.+ +-..+++|+++|.|..-+...
T Consensus 300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g 379 (555)
T KOG1587|consen 300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG 379 (555)
T ss_pred eccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccC
Confidence 2 35699999999999999876432111100 1 1223588999988 566899999999988744433
Q ss_pred Cc--------eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC-CCceeEEEcC-CCCeEEEEEccCCCEE
Q psy10114 671 MS--------PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL-TGQPMQCVDT-GSQVCNLAWSKHSSEL 740 (819)
Q Consensus 671 ~~--------~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~-tg~~v~~l~~-~s~V~sLafSpdg~~L 740 (819)
.+ ....+..|.++|.++.++|.+..++.++| |-++++|... ...++..++. ...+.+++|||...-+
T Consensus 380 ~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g---DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpav 456 (555)
T KOG1587|consen 380 YTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG---DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAV 456 (555)
T ss_pred CcccccccccccccccccCcceEeeecCCCccceeeeec---cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceE
Confidence 22 23356678999999999999999998885 9999999988 6666665543 4459999999998877
Q ss_pred EEEEecCCCeEEEEECC--CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 741 VSTHGYSQNQILVWKYP--TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 741 astsGssDg~I~IWDl~--s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+++ +..+|.+.+||+. ...++.+...+....+.+.|+++|+.|+.|...|++.+|++...
T Consensus 457 F~~-~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 457 FAT-VDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred EEE-EcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 776 7889999999986 44556666556667788889999999999999999999999654
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=171.50 Aligned_cols=269 Identities=19% Similarity=0.319 Sum_probs=210.8
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCC--EEEEEecCceEEEeecCCc------
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN--LVAVGTHHGYVQVWDVSVA------ 587 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~--~LAsGs~DGtI~IWDl~tg------ 587 (819)
..++++++..+++|+.||+|+||.+.||...+.+.+. +.|.||+|+|.++ .||++-.+. +.|-+..-|
T Consensus 405 ~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d---~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~ 480 (733)
T KOG0650|consen 405 SISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD---SEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPIFGDRLEVG 480 (733)
T ss_pred EEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec---ceeEEEEecCCCCceeEEEEecCc-eEEeCccccchhhhc
Confidence 3456677889999999999999999999998877764 5899999999764 555544333 333332111
Q ss_pred -------------------------------eEEEEEecCCCCeEEEEe--CCceeeeccC---CCeEEEEECCCCCccc
Q psy10114 588 -------------------------------KQVHKLVGHTARVGALAW--NGDMLSSGSR---DRMILQRDVRTPNSQS 631 (819)
Q Consensus 588 -------------------------------k~i~tl~gHs~~V~sLaw--ng~~LaSGS~---DGtI~IWDi~t~~~~~ 631 (819)
+-++....|...|..+.| .|++|++... ...|.|.++.....+
T Consensus 481 ~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ- 559 (733)
T KOG0650|consen 481 PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQ- 559 (733)
T ss_pred chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccccccc-
Confidence 112344467888999999 5889887655 457889998876543
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
..+....+.|.++.|+|...+|++++. ..|+|||+..++.++.+......|..++.+|.|..+++.+ .|+.+..+
T Consensus 560 -~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs---~d~k~~Wf 634 (733)
T KOG0650|consen 560 -SPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGS---YDKKMCWF 634 (733)
T ss_pred -CchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEec---CCCeeEEE
Confidence 344455678999999999999998887 5899999998888888877788899999999999888743 89999999
Q ss_pred ECCCC-ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC---------CCcEEEEEecCCCC----EEEEE
Q psy10114 712 NTLTG-QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP---------TLTQVAKLTGHSYR----VLYLA 776 (819)
Q Consensus 712 Dl~tg-~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~---------s~k~l~sl~gH~~~----VtsLa 776 (819)
|+.-+ ++.+.+ .|...+.+++|++.-..+++ |+.||.+.|+.-. ---++..+++|... |.+..
T Consensus 635 DldlsskPyk~lr~H~~avr~Va~H~ryPLfas--~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~ 712 (733)
T KOG0650|consen 635 DLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFAS--GSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTI 712 (733)
T ss_pred EcccCcchhHHhhhhhhhhhhhhhccccceeee--ecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeec
Confidence 99765 445555 35677999999999888888 8899999998632 12456778888655 99999
Q ss_pred EecCCCEEEEEeCCCcEEEE
Q psy10114 777 MSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 777 fSpDG~~LaSGS~DGtIrIW 796 (819)
|+|....|++++.||+|++|
T Consensus 713 wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 713 WHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ccCCCceEEecCCCceEEee
Confidence 99999999999999999998
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=172.03 Aligned_cols=267 Identities=15% Similarity=0.253 Sum_probs=201.9
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA 598 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~ 598 (819)
+..+|..++. ..++.+.++|.++|... ..+++|.+.|.|++|+.||+.+|+|+.|..|.+|+.+-...++ -.|..
T Consensus 20 fkPDGsqL~l-AAg~rlliyD~ndG~ll--qtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk--YSH~D 94 (1081)
T KOG1538|consen 20 FKPDGTQLIL-AAGSRLLVYDTSDGTLL--QPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK--YSHND 94 (1081)
T ss_pred ECCCCceEEE-ecCCEEEEEeCCCcccc--cccccccceEEEEEEccCCceeccCCCceeEEEecccccceee--eccCC
Confidence 3445555443 45678999999998764 4789999999999999999999999999999999864332222 25899
Q ss_pred CeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE
Q psy10114 599 RVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 599 ~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t 676 (819)
.|.|+.|| ...|++++-+ ..-+|....... .+ ......+++.+|..||++++.|-.||+|.+-+. ++++...
T Consensus 95 ~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V---~K-~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~ 168 (1081)
T KOG1538|consen 95 AIQCMSFNPITHQLASCSLS-DFGLWSPEQKSV---SK-HKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVK 168 (1081)
T ss_pred eeeEeecCchHHHhhhcchh-hccccChhhhhH---Hh-hhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceE
Confidence 99999997 4578887754 345676655331 11 122457899999999999999999999999864 4454444
Q ss_pred Ee---cCCCCEEEEEEcCCCC----eEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 677 YT---EHLAAVKAIAWSPHHH----GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 677 ~~---~h~~~VtsLafSPdg~----~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
+. +...+|.+++|+|... .+++... ...++.++.+.....-+.-..+-...++.+.++|.++.. |+.|+
T Consensus 169 I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~D--W~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~Li--GGsdk 244 (1081)
T KOG1538|consen 169 IERPGGSNSPIWSICWNPSSGEGRNDILAVAD--WGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILL--GGSDK 244 (1081)
T ss_pred EeCCCCCCCCceEEEecCCCCCCccceEEEEe--ccceeEEEEecceeecccccCCCCchhheeccCCcEEEE--ccCCC
Confidence 43 4678999999999642 2333332 566777776643322223334556788999999999999 88999
Q ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.+.+|- +.|-.+.++...+..|+.++..|++++++.|+.||+|-.|++...
T Consensus 245 ~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fS 295 (1081)
T KOG1538|consen 245 QLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFS 295 (1081)
T ss_pred ceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHh
Confidence 999997 567778888778889999999999999999999999999998543
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.6e-16 Score=173.29 Aligned_cols=127 Identities=23% Similarity=0.397 Sum_probs=104.4
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-------eEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-------MQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-------v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
...|+.+.|.|....-++.++ .||.|++|.+..+.. ...+ .+...|+++.|+|-...++++ ++.|.+|+
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~--ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~-asyd~Ti~ 703 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVAT--DDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAV-ASYDSTIE 703 (1012)
T ss_pred CceeeecccCCCChHHeeecc--cCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhh-hhccceee
Confidence 567999999997766666665 899999999876432 2222 366789999999965544443 67899999
Q ss_pred EEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecccccc
Q psy10114 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKS 810 (819)
Q Consensus 753 IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~~s 810 (819)
+||+.+++....+.+|++.|.+++|||||+.+++.+.||+|++|+-.+++....+.+.
T Consensus 704 lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~g 761 (1012)
T KOG1445|consen 704 LWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKG 761 (1012)
T ss_pred eeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCC
Confidence 9999999999999999999999999999999999999999999999887765555443
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.7e-16 Score=162.69 Aligned_cols=241 Identities=21% Similarity=0.390 Sum_probs=185.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCc------------eEEEEEe-cCCCCeEEEEe---------CCceeeec
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA------------KQVHKLV-GHTARVGALAW---------NGDMLSSG 613 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg------------k~i~tl~-gHs~~V~sLaw---------ng~~LaSG 613 (819)
.-...+.|+|||..|.+-+.|..+.+|++... +...+++ .....|...+| +.+++++.
T Consensus 50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s 129 (406)
T KOG2919|consen 50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS 129 (406)
T ss_pred hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence 34567899999999999999999999988421 1111121 23456777777 24589999
Q ss_pred cCCCeEEEEECCCCCccceEEEecccCCe---EEEEECCCCCEEEEEECCCeEEEEEC-CCCcee--EEE-----ecCCC
Q psy10114 614 SRDRMILQRDVRTPNSQSERRLVGHRQEV---CGLKWSPDNQYLASGGNDNRLYVWNL-HSMSPL--QTY-----TEHLA 682 (819)
Q Consensus 614 S~DGtI~IWDi~t~~~~~v~~l~gH~~~V---tsLafSpdg~~LaSGS~DGtI~IWDl-~t~~~i--~t~-----~~h~~ 682 (819)
+++.-|++||.-+++.........|.+++ .+++|+|||.+|++|.+ +.|+++|+ +.|+.. ... .+..+
T Consensus 130 sr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy~t~~~~k~gq~g 208 (406)
T KOG2919|consen 130 SRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVYTTVTKGKFGQKG 208 (406)
T ss_pred cccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcchhhhhcccccccc
Confidence 99999999999998765444445555544 57999999999998765 69999999 555422 111 13367
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC-CCc
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP-TLT 760 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~-s~k 760 (819)
-+.+++|+|.....++.|+ ....+-++.-..+.++..+ .+++.|+.++|.++|+.+++. +..+..|..||++ ...
T Consensus 209 iisc~a~sP~~~~~~a~gs--Y~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsG-aRk~dkIl~WDiR~~~~ 285 (406)
T KOG2919|consen 209 IISCFAFSPMDSKTLAVGS--YGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSG-ARKDDKILCWDIRYSRD 285 (406)
T ss_pred eeeeeeccCCCCcceeeec--ccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeeccc-ccCCCeEEEEeehhccc
Confidence 7899999999998888876 8888889888888887776 578899999999999999994 3467899999998 456
Q ss_pred EEEEEecCCC-C--EEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 761 QVAKLTGHSY-R--VLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 761 ~l~sl~gH~~-~--VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
++..+..|.+ . -......|+|+.|++|+.||.|++||+.+
T Consensus 286 pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 286 PVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred hhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 6777777755 2 22355578999999999999999999987
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.8e-15 Score=160.76 Aligned_cols=206 Identities=19% Similarity=0.313 Sum_probs=173.2
Q ss_pred ccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCc-------eEEEEEecCCCCeEEEEeC---CceeeeccCCCeE
Q psy10114 551 LSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVA-------KQVHKLVGHTARVGALAWN---GDMLSSGSRDRMI 619 (819)
Q Consensus 551 l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tg-------k~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI 619 (819)
+.+|.++|..++|+| +...||+|+.|.+|.||++..+ +.+..+.||..+|.-++|+ .+.|++++.|.+|
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence 468999999999999 5678999999999999998654 4577889999999999995 6799999999999
Q ss_pred EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCC-EEEEEEcCCCCeEEE
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA-VKAIAWSPHHHGLLA 698 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~-VtsLafSPdg~~LLa 698 (819)
.+|++.+++.. ..+. |.+.|.++.|+.||.++++.+.|..|+|||.++++.+..-.+|.+. -..+.|-.+|. +++
T Consensus 157 ~iWnv~tgeal--i~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~t 232 (472)
T KOG0303|consen 157 SIWNVGTGEAL--ITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFT 232 (472)
T ss_pred EEEeccCCcee--eecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-eee
Confidence 99999998743 4444 9999999999999999999999999999999999999888777543 44566777887 666
Q ss_pred EEc-cCCCCeEEEEECCCCc---eeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 699 SGG-GTADRCIRFWNTLTGQ---PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 699 SGg-Gs~DgtIrIWDl~tg~---~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
+|- ...++.+-+||..+-+ ....+++.+.|.---|.+|.+.++.+ |-.|+.|+.|.+.+..+
T Consensus 233 TGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~-GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 233 TGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLC-GKGDSSIRYFEITNEPP 298 (472)
T ss_pred eccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEE-ecCCcceEEEEecCCCc
Confidence 653 3367899999976533 45677888889888899999888876 88899999999876553
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.5e-15 Score=153.83 Aligned_cols=246 Identities=18% Similarity=0.350 Sum_probs=184.5
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcC--CCceEEEEeccCCCCCeEEEEEcC--CCCEEEEEecCceEEEeecCC-----
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSAC--TSQVTRLCDLSADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVSV----- 586 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~--tg~~~~l~~l~~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~t----- 586 (819)
...+++.|.++++++.|+.|+|||.. ++..........|.+.|..+.|.+ -|+.+|+++.|+++.||.-..
T Consensus 18 dVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~ 97 (361)
T KOG2445|consen 18 DVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEA 97 (361)
T ss_pred eeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccccc
Confidence 34456668999999999999999953 455555667788999999999976 589999999999999997521
Q ss_pred ----ceEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCc----cceEE-------EecccCCeEEEEE
Q psy10114 587 ----AKQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNS----QSERR-------LVGHRQEVCGLKW 647 (819)
Q Consensus 587 ----gk~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~----~~v~~-------l~gH~~~VtsLaf 647 (819)
-....++....+.|+++.|. |-.+++++.||.++||+.-..-. ..... ...+.....|+.|
T Consensus 98 ~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsW 177 (361)
T KOG2445|consen 98 HGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSW 177 (361)
T ss_pred ccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEee
Confidence 12355667788999999994 55899999999999998765321 11111 2246677889999
Q ss_pred CCC---CCEEEEEECC-----CeEEEEECCCC----ceeEEEecCCCCEEEEEEcCCC---CeEEEEEccCCCCeEEEEE
Q psy10114 648 SPD---NQYLASGGND-----NRLYVWNLHSM----SPLQTYTEHLAAVKAIAWSPHH---HGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 648 Spd---g~~LaSGS~D-----GtI~IWDl~t~----~~i~t~~~h~~~VtsLafSPdg---~~LLaSGgGs~DgtIrIWD 712 (819)
++. ..+||.|+.+ +.++||....+ ..+.++.+|..+|++++|.|+- -.+++++. .|| |+||.
T Consensus 178 n~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~--kDg-v~I~~ 254 (361)
T KOG2445|consen 178 NPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVAT--KDG-VRIFK 254 (361)
T ss_pred ccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEee--cCc-EEEEE
Confidence 973 4578888876 47888876543 2455677899999999999963 34666665 788 99999
Q ss_pred CCCCc-----------------eeE---EE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC---CCcEEEEEe
Q psy10114 713 TLTGQ-----------------PMQ---CV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP---TLTQVAKLT 766 (819)
Q Consensus 713 l~tg~-----------------~v~---~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~---s~k~l~sl~ 766 (819)
+.... .+. .+ +|.++|..+.|+-.|..|.+ .+.||.|++|... ..++...++
T Consensus 255 v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsS--tGdDG~VRLWkany~n~~kC~sv~~ 330 (361)
T KOG2445|consen 255 VKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSS--TGDDGCVRLWKANYNNLWKCTSVLK 330 (361)
T ss_pred EeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEee--cCCCceeeehhhhhhhhheeeeEEe
Confidence 87311 112 22 46789999999999999998 6689999999864 344444444
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.9e-16 Score=174.67 Aligned_cols=240 Identities=21% Similarity=0.368 Sum_probs=179.8
Q ss_pred EEEEcC---CCCEEEEEecCceEEEeecCCceE------EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC
Q psy10114 560 SVAWNE---RGNLVAVGTHHGYVQVWDVSVAKQ------VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 560 sLafSp---dG~~LAsGs~DGtI~IWDl~tgk~------i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~ 628 (819)
+..|++ ....||++.+||.|.++|...... +.....|...|.++.| ....|++++.|.++++||+.+.+
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~ 133 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR 133 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence 355654 346899999999999999875432 3556689999999999 34589999999999999999987
Q ss_pred ccceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCc--------------------e-------eEEEecC
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHSMS--------------------P-------LQTYTEH 680 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t~~--------------------~-------i~t~~~h 680 (819)
..-...+.+|...|.+++|.+. ...|++|+.||.|.|||++... + +.....+
T Consensus 134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~ 213 (720)
T KOG0321|consen 134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAA 213 (720)
T ss_pred eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccc
Confidence 6655668999999999999995 4578999999999999986432 1 1112234
Q ss_pred CCCEEE---EEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--------c-C---CCCeEEEEEccCCCEEEEEEe
Q psy10114 681 LAAVKA---IAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--------D-T---GSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 681 ~~~Vts---LafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--------~-~---~s~V~sLafSpdg~~LastsG 745 (819)
...|.+ +.+..|...++.+|+ .|+.|+|||+++....... . + ...+.++.....|.++++ .
T Consensus 214 s~ti~ssvTvv~fkDe~tlaSaga--~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~A--s 289 (720)
T KOG0321|consen 214 SNTIFSSVTVVLFKDESTLASAGA--ADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFA--S 289 (720)
T ss_pred cCceeeeeEEEEEeccceeeeccC--CCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEE--E
Confidence 444555 555667776666654 7999999999976543322 1 1 235788888889999999 5
Q ss_pred cCCCeEEEEECCCC--cEEEEEecCCCCE--EEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 746 YSQNQILVWKYPTL--TQVAKLTGHSYRV--LYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 746 ssDg~I~IWDl~s~--k~l~sl~gH~~~V--tsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
..|+.|..|++.+. .+++.+.++...- ..-..+||+.++++|+.|+...+|.+.+.+.
T Consensus 290 CtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~ 351 (720)
T KOG0321|consen 290 CTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA 351 (720)
T ss_pred ecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC
Confidence 67999999999754 4455555553221 1234689999999999999999999987654
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-15 Score=157.91 Aligned_cols=249 Identities=16% Similarity=0.247 Sum_probs=179.7
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-----EEEEEecCCCCeEEEEeCCc---eeeeccCCCeEEE
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-----QVHKLVGHTARVGALAWNGD---MLSSGSRDRMILQ 621 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-----~i~tl~gHs~~V~sLawng~---~LaSGS~DGtI~I 621 (819)
.+.+|.+.|++++|+.||+.||+++.|+.|++|++++-. +++.- -.-+.-+.+.|.++ .+++.-+..++++
T Consensus 81 ~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~n-ve~dhpT~V~FapDc~s~vv~~~~g~~l~v 159 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQN-VEYDHPTRVVFAPDCKSVVVSVKRGNKLCV 159 (420)
T ss_pred hhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhcc-ccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence 478899999999999999999999999999999997532 12111 11224456777433 6666667778888
Q ss_pred EECCCCCc---c-c------eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcC
Q psy10114 622 RDVRTPNS---Q-S------ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691 (819)
Q Consensus 622 WDi~t~~~---~-~------v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP 691 (819)
|.+...+. . . ...-..|.-.+..+-....+.++++++.|.+|.+||++ |+.+..+...+..-...+.||
T Consensus 160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP 238 (420)
T KOG2096|consen 160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSP 238 (420)
T ss_pred EEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCC
Confidence 87654221 0 0 00112355566677777788999999999999999998 888888887777778889999
Q ss_pred CCCeEEEEEccCCCCeEEEEECC---CCc-----eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC----
Q psy10114 692 HHHGLLASGGGTADRCIRFWNTL---TGQ-----PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT---- 758 (819)
Q Consensus 692 dg~~LLaSGgGs~DgtIrIWDl~---tg~-----~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s---- 758 (819)
+|++++++| ..-.|++|..- .|. .+..+ .|.+.|..++|+++...+++ .+.||.+++||.+-
T Consensus 239 ~GRFia~~g---FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vt--vSkDG~wriwdtdVrY~~ 313 (420)
T KOG2096|consen 239 DGRFIAVSG---FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVT--VSKDGKWRIWDTDVRYEA 313 (420)
T ss_pred CCcEEEEec---CCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEE--EecCCcEEEeeccceEec
Confidence 999777766 56779999863 222 11222 56788999999999999999 66899999999741
Q ss_pred C---cEEEEE----ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 759 L---TQVAKL----TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 759 ~---k~l~sl----~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+ +.+.+. .+..+....++++|+|+.|+.+.+ ..++++..++++....
T Consensus 314 ~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~ 367 (420)
T KOG2096|consen 314 GQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPE 367 (420)
T ss_pred CCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchh
Confidence 1 112211 122334458999999999886554 5799999888765443
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.8e-15 Score=154.43 Aligned_cols=266 Identities=21% Similarity=0.351 Sum_probs=202.7
Q ss_pred EEec--CCeEEEEECCCeEEEEEcCCCc------------eEEEEeccCCCCCeEEEEEc-------CCCCEEEEEecCc
Q psy10114 519 VDWS--SQNVLSVGLGSCVYLWSACTSQ------------VTRLCDLSADGNSVTSVAWN-------ERGNLVAVGTHHG 577 (819)
Q Consensus 519 ldwS--~~~LLa~g~Dg~V~LWd~~tg~------------~~~l~~l~~h~~~VtsLafS-------pdG~~LAsGs~DG 577 (819)
..|+ |..+++-+.|+.+.+|++...- ......+ .....|...+|- |+..++|+.+.+.
T Consensus 55 ckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~-~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~ 133 (406)
T KOG2919|consen 55 CKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRY-QEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQ 133 (406)
T ss_pred ceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEe-ccCCEEEEEEeeeccccCCCccceeeeccccC
Confidence 4555 5679999999999999874311 0011111 124667777774 6778999999999
Q ss_pred eEEEeecCCceEEEEEec--CCCC---eEEEEe--CCceeeeccCCCeEEEEEC-CCCCccceEEE-----ecccCCeEE
Q psy10114 578 YVQVWDVSVAKQVHKLVG--HTAR---VGALAW--NGDMLSSGSRDRMILQRDV-RTPNSQSERRL-----VGHRQEVCG 644 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~g--Hs~~---V~sLaw--ng~~LaSGS~DGtI~IWDi-~t~~~~~v~~l-----~gH~~~Vts 644 (819)
-|++||.-+|+....+.+ |... ..+++| +|.+|++| ..+.|+++|+ +.+....+... .+..+-+.+
T Consensus 134 PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc 212 (406)
T KOG2919|consen 134 PIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISC 212 (406)
T ss_pred ceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeee
Confidence 999999999988777763 4443 457888 56677765 5679999999 44332222222 233677899
Q ss_pred EEECC-CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-ceeEEE
Q psy10114 645 LKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG-QPMQCV 722 (819)
Q Consensus 645 LafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l 722 (819)
++|+| +.+.+|.|+...++-|+.-..+.++..+-+|.+.|+.++|.++|+.+++-+ ..|..|..||++.. .++..+
T Consensus 213 ~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGa--Rk~dkIl~WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 213 FAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGA--RKDDKILCWDIRYSRDPVYAL 290 (406)
T ss_pred eeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccc--cCCCeEEEEeehhccchhhhh
Confidence 99999 555899999999999999889999999999999999999999999777643 37889999999864 344333
Q ss_pred ----cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEEEecCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 723 ----DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 723 ----~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
...++-.-....|+++.|++ |+.||.|++||+++ +..+..+..+...++.++++|--..++|+++.
T Consensus 291 ~rhv~~TNQRI~FDld~~~~~Las--G~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 291 ERHVGDTNQRILFDLDPKGEILAS--GDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred hhhccCccceEEEecCCCCceeec--cCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 21233334566789999998 99999999999997 77788888899999999999998888888875
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=157.32 Aligned_cols=205 Identities=24% Similarity=0.430 Sum_probs=166.7
Q ss_pred EEEecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCc-----cceEEEecccCCeEEEEECCC-CCEEEEEECCC
Q psy10114 591 HKLVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNS-----QSERRLVGHRQEVCGLKWSPD-NQYLASGGNDN 661 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~-----~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DG 661 (819)
-.+.||+++|..++| |.+.+||||.|.+|.+|++..+.. ..+..+.+|...|--++|+|. .+.|++++.|+
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 345799999999999 577999999999999999875432 356789999999999999994 56899999999
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSE 739 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~ 739 (819)
+|.+||+.+++.+.++. |...|.++.|+-+|..+++++ .|+.||+||.++++.+..-. .+..-..+.|-.+|.
T Consensus 155 ~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~Ttc---kDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~- 229 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTC---KDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK- 229 (472)
T ss_pred eEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeec---ccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-
Confidence 99999999999988888 999999999999999777665 89999999999999988762 345567788888998
Q ss_pred EEEEEec---CCCeEEEEECCCCcEE---EEEecCCCCEEEEEEecCCCEEEE-EeCCCcEEEEECCCCc
Q psy10114 740 LVSTHGY---SQNQILVWKYPTLTQV---AKLTGHSYRVLYLAMSPDGEAIVT-GAGDETLRFWNVFSKV 802 (819)
Q Consensus 740 LastsGs---sDg~I~IWDl~s~k~l---~sl~gH~~~VtsLafSpDG~~LaS-GS~DGtIrIWdl~s~~ 802 (819)
++++ |. ++.++-+||-.+.+.- .++.. ...|.---+.+|.+.+.. |-+|+.||.|++.+..
T Consensus 230 i~tT-Gfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 230 IFTT-GFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred eeee-ccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 5544 54 4788999998765443 33333 344666667888887754 6679999999998765
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.6e-15 Score=156.62 Aligned_cols=240 Identities=18% Similarity=0.330 Sum_probs=181.9
Q ss_pred CcCCcceEEEEEecCC----eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEee
Q psy10114 509 ELQDDFYLNLVDWSSQ----NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWD 583 (819)
Q Consensus 509 ~l~dDfyv~~ldwS~~----~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWD 583 (819)
+-.+.||-.+...+.. .++++|.-|.|+|.|..+++... .+.+|+..|+.+.+.|+. +++++|+.|..|++||
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~--~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwn 164 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSK--NYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWN 164 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhcc--ceeccCccchhhhcCCCCCcEEEEecCCceEEEEe
Confidence 3445667665555532 58888889999999999988765 567899999999999976 7899999999999999
Q ss_pred cCCceEEEEEe---cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccc-------------------------e-
Q psy10114 584 VSVAKQVHKLV---GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQS-------------------------E- 632 (819)
Q Consensus 584 l~tgk~i~tl~---gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~-------------------------v- 632 (819)
+++..++..+- ||.+.|.++.| +|+++++++.|.++++|++..++... .
T Consensus 165 I~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~f 244 (385)
T KOG1034|consen 165 IQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDF 244 (385)
T ss_pred ccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccc
Confidence 99999998875 79999999999 58899999999999999998432100 0
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC-CCc-------------eeEEEecCCCCEEEE--EEcCCCCeE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH-SMS-------------PLQTYTEHLAAVKAI--AWSPHHHGL 696 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~-t~~-------------~i~t~~~h~~~VtsL--afSPdg~~L 696 (819)
.+...|...|-|+.|- |+++++-|-+|.|..|... -++ .+.++.-....|.-+ +|.|.++.
T Consensus 245 st~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~- 321 (385)
T KOG1034|consen 245 STTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKM- 321 (385)
T ss_pred cccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHH-
Confidence 0223466667777775 5789999999999999872 111 122333334445444 45677764
Q ss_pred EEEEccCCCCeEEEEECCCCceeE--EE---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 697 LASGGGTADRCIRFWNTLTGQPMQ--CV---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 697 LaSGgGs~DgtIrIWDl~tg~~v~--~l---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
++.|+ +.|.|.+||++..++.. ++ ..+..|...+|+.||..++. ..+|+.|.-||..
T Consensus 322 la~gn--q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~--vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 322 LALGN--QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVL--VCDDGTVWRWDRV 383 (385)
T ss_pred Hhhcc--CCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEE--EeCCCcEEEEEee
Confidence 44544 89999999999877632 22 34567999999999999999 5689999999853
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=153.54 Aligned_cols=193 Identities=20% Similarity=0.315 Sum_probs=159.5
Q ss_pred eEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE
Q psy10114 600 VGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 600 V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~ 677 (819)
..|+.| .|++||+|+.||.|.+||+.+.. ....+.+|..+|++++||+||+.|+++|.|..|.+||+..|.+++++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc--hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 668888 49999999999999999999866 34778899999999999999999999999999999999999999988
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--cCC----CCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--DTG----SQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~~----s~V~sLafSpdg~~LastsGssDg~I 751 (819)
. ..++|....|+|.....+++.- .+..-.+-++..+.. ..+ +.+ ....+..|.+.|+++++ |...|.+
T Consensus 104 r-f~spv~~~q~hp~k~n~~va~~--~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIit--GtsKGkl 177 (405)
T KOG1273|consen 104 R-FDSPVWGAQWHPRKRNKCVATI--MEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIIT--GTSKGKL 177 (405)
T ss_pred E-ccCccceeeeccccCCeEEEEE--ecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEE--ecCcceE
Confidence 7 6789999999998766655543 444455555554221 111 111 12233468999999999 8999999
Q ss_pred EEEECCCCcEEEEEecCC-CCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 752 LVWKYPTLTQVAKLTGHS-YRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~gH~-~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
.++|..+.+.++.++-.. ..|.++.++..|++++.-+.|..||.|++..
T Consensus 178 lv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~d 227 (405)
T KOG1273|consen 178 LVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISD 227 (405)
T ss_pred EEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhh
Confidence 999999999999888665 7899999999999999999999999999873
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=7e-15 Score=152.16 Aligned_cols=244 Identities=19% Similarity=0.248 Sum_probs=185.1
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe-CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW-NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t 626 (819)
+.+.+|.+.|+++.|..+++ |.+|...|.|++|++++.+....++ .+...|+.+.- -++.+.+-++|+.+.+|++..
T Consensus 8 fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~ 86 (323)
T KOG0322|consen 8 FVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAY 86 (323)
T ss_pred eEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEccC
Confidence 34567889999999998775 8899999999999999998888888 56677777776 458899999999999999875
Q ss_pred CCccceE-----------------------EE----------------------------ecccCCeEEEEECC-CCC--
Q psy10114 627 PNSQSER-----------------------RL----------------------------VGHRQEVCGLKWSP-DNQ-- 652 (819)
Q Consensus 627 ~~~~~v~-----------------------~l----------------------------~gH~~~VtsLafSp-dg~-- 652 (819)
.....+. .+ .+..+.+.+..+.. ++.
T Consensus 87 s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~ 166 (323)
T KOG0322|consen 87 SAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTF 166 (323)
T ss_pred cceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceE
Confidence 2110000 00 01123455555433 222
Q ss_pred EEEEEECCCeEEEEECCCCce----------eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC--cee-
Q psy10114 653 YLASGGNDNRLYVWNLHSMSP----------LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG--QPM- 719 (819)
Q Consensus 653 ~LaSGS~DGtI~IWDl~t~~~----------i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg--~~v- 719 (819)
.+++|-++|.+.+||+.++.. ......|..+|.++.+.+.-..=+ +| ..+..+..|++... ...
T Consensus 167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGi-sg--ga~dkl~~~Sl~~s~gslq~ 243 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGI-SG--GADDKLVMYSLNHSTGSLQI 243 (323)
T ss_pred EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCc-CC--CccccceeeeeccccCcccc
Confidence 567888999999999998743 333446889999999986433222 23 36778888887643 221
Q ss_pred -EEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 720 -QCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 720 -~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
.... ..-.+..+.+-||++.+++ ++.|+.|++|..+++.+++.++-|.+.|.+++|+||...+|+++.|++|.+|+
T Consensus 244 ~~e~~lknpGv~gvrIRpD~KIlAT--AGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 244 RKEITLKNPGVSGVRIRPDGKILAT--AGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred cceEEecCCCccceEEccCCcEEee--cccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeee
Confidence 1122 2345888899999999999 77999999999999999999999999999999999999999999999999999
Q ss_pred C
Q psy10114 798 V 798 (819)
Q Consensus 798 l 798 (819)
+
T Consensus 322 L 322 (323)
T KOG0322|consen 322 L 322 (323)
T ss_pred c
Confidence 7
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.5e-14 Score=146.16 Aligned_cols=277 Identities=16% Similarity=0.304 Sum_probs=197.5
Q ss_pred CcceEEEEEec----CC-eEEEEEC----CCeEEEEEc--CCCceEEEEeccCCCCCeEEEEEcCCC-----CEEEEEec
Q psy10114 512 DDFYLNLVDWS----SQ-NVLSVGL----GSCVYLWSA--CTSQVTRLCDLSADGNSVTSVAWNERG-----NLVAVGTH 575 (819)
Q Consensus 512 dDfyv~~ldwS----~~-~LLa~g~----Dg~V~LWd~--~tg~~~~l~~l~~h~~~VtsLafSpdG-----~~LAsGs~ 575 (819)
..+.+-+++|+ .+ .++.|+. .+.|.|-.+ .+++...... -.|.-+++.+.|.|+. ++||+.+
T Consensus 43 ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~-fd~~YP~tK~~wiPd~~g~~pdlLATs~- 120 (364)
T KOG0290|consen 43 APWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDAN-FDHPYPVTKLMWIPDSKGVYPDLLATSS- 120 (364)
T ss_pred CCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCC-CCCCCCccceEecCCccccCcchhhccc-
Confidence 34556677787 23 4555543 355666654 3445444333 2577899999999976 3666654
Q ss_pred CceEEEeecCCc--eE--EEE-----EecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCC-ccceEEEecccCCe
Q psy10114 576 HGYVQVWDVSVA--KQ--VHK-----LVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPN-SQSERRLVGHRQEV 642 (819)
Q Consensus 576 DGtI~IWDl~tg--k~--i~t-----l~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~-~~~v~~l~gH~~~V 642 (819)
..+++|.+... +. ... -..+.+++++..| +.+++.++|-|-+..+||++++. ......+..|..+|
T Consensus 121 -D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV 199 (364)
T KOG0290|consen 121 -DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEV 199 (364)
T ss_pred -CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcce
Confidence 37999998732 11 111 1246789999999 47899999999999999999873 23356788999999
Q ss_pred EEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEEe---cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-c
Q psy10114 643 CGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTYT---EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG-Q 717 (819)
Q Consensus 643 tsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg-~ 717 (819)
..++|..++ +.+|+.|.||.|++||++..+--..+- ....+...++|++....++++-. .....|.+.|++.- .
T Consensus 200 ~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~-~dS~~V~iLDiR~P~t 278 (364)
T KOG0290|consen 200 YDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFA-MDSNKVVILDIRVPCT 278 (364)
T ss_pred eEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhh-cCCceEEEEEecCCCc
Confidence 999999855 478999999999999999876433332 22567889999998888777654 24567999999874 4
Q ss_pred eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE------EEEEecCCCCEEEEEEec-CCCEEEEEeC
Q psy10114 718 PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ------VAKLTGHSYRVLYLAMSP-DGEAIVTGAG 789 (819)
Q Consensus 718 ~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~------l~sl~gH~~~VtsLafSp-DG~~LaSGS~ 789 (819)
++..+ .|++.|+.++|.|....-+++ +++|.++.+||+.+.-. +.... -.+.|..+.|++ .+..++.+.+
T Consensus 279 pva~L~~H~a~VNgIaWaPhS~~hict-aGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 279 PVARLRNHQASVNGIAWAPHSSSHICT-AGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred ceehhhcCcccccceEecCCCCceeee-cCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence 45454 688999999999987766655 66899999999975433 22222 456799999996 5667776654
Q ss_pred CCcEEE
Q psy10114 790 DETLRF 795 (819)
Q Consensus 790 DGtIrI 795 (819)
.++.+
T Consensus 357 -kklei 361 (364)
T KOG0290|consen 357 -KKLEI 361 (364)
T ss_pred -CeeeE
Confidence 34443
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-13 Score=139.56 Aligned_cols=234 Identities=18% Similarity=0.289 Sum_probs=178.9
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCC----------ceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSV----------AKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t----------gk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~ 625 (819)
..|.+-+|+|.+++|++|..+|.|.+..+.+ ...+...++|.++|..++|..+.|++|+. |.|+-|..+
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~ 89 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWN 89 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeeh
Confidence 3466678999999999999999999998753 13455668999999999999888888876 999999876
Q ss_pred CCCcc------ceEEEecc-----cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCC
Q psy10114 626 TPNSQ------SERRLVGH-----RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694 (819)
Q Consensus 626 t~~~~------~v~~l~gH-----~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~ 694 (819)
..... .......| --+|+++...|..+-++.++.|+.++-||+++|+..+++++|..-|.+++--....
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~ 169 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANG 169 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCc
Confidence 53210 00111122 24689999999888888888999999999999999999999999999998844444
Q ss_pred eEEEEEccCCCCeEEEEECCCCceeEEEcC-----------CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDT-----------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA 763 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-----------~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~ 763 (819)
.++ +|+ .||++|+||+++++.++.++. +..|.+++ -+...+++ | ....+.+|.+++.+...
T Consensus 170 qil-sG~--EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala--~~edWlvC--G-gGp~lslwhLrsse~t~ 241 (325)
T KOG0649|consen 170 QIL-SGA--EDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVC--G-GGPKLSLWHLRSSESTC 241 (325)
T ss_pred cee-ecC--CCccEEEEeccccceeEEeccccChhhcCcccCceeEEEe--ccCceEEe--c-CCCceeEEeccCCCceE
Confidence 344 554 999999999999999988743 12244444 46667777 3 24679999999988887
Q ss_pred EEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 764 KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 764 sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.+. -.++|..+.|..| .+++++....|.-|.+..-
T Consensus 242 vfp-ipa~v~~v~F~~d--~vl~~G~g~~v~~~~l~Gv 276 (325)
T KOG0649|consen 242 VFP-IPARVHLVDFVDD--CVLIGGEGNHVQSYTLNGV 276 (325)
T ss_pred EEe-cccceeEeeeecc--eEEEeccccceeeeeeccE
Confidence 765 4456888888544 6777887778888887654
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-14 Score=149.03 Aligned_cols=234 Identities=21% Similarity=0.386 Sum_probs=176.1
Q ss_pred CCcCCcceEEEEEecCCe-----EEEEECCCeEEEEEcCC--CceEEEEec-----cCCCCCeEEEEEcC-CCCEEEEEe
Q psy10114 508 PELQDDFYLNLVDWSSQN-----VLSVGLGSCVYLWSACT--SQVTRLCDL-----SADGNSVTSVAWNE-RGNLVAVGT 574 (819)
Q Consensus 508 p~l~dDfyv~~ldwS~~~-----LLa~g~Dg~V~LWd~~t--g~~~~l~~l-----~~h~~~VtsLafSp-dG~~LAsGs 574 (819)
+.+...+.++.+-|.++. =+.++.+..+++|.+.. ++......+ ..+..++++..|+. +-+++.+++
T Consensus 91 a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS 170 (364)
T KOG0290|consen 91 ANFDHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS 170 (364)
T ss_pred CCCCCCCCccceEecCCccccCcchhhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence 335556667777777543 12345567899999873 433322222 23467899999987 568999999
Q ss_pred cCceEEEeecCCce---EEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecc-cCCeEEEEE
Q psy10114 575 HHGYVQVWDVSVAK---QVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGH-RQEVCGLKW 647 (819)
Q Consensus 575 ~DGtI~IWDl~tgk---~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH-~~~VtsLaf 647 (819)
-|-+..|||++++. ...++..|...|..++|. -+.+++.|.||++++||++..+...+..-... ......++|
T Consensus 171 iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLsw 250 (364)
T KOG0290|consen 171 IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSW 250 (364)
T ss_pred ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeecc
Confidence 99999999999873 356678999999999993 45899999999999999998764332222222 457888999
Q ss_pred CC-CCCEEEEEECC-CeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc------e
Q psy10114 648 SP-DNQYLASGGND-NRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ------P 718 (819)
Q Consensus 648 Sp-dg~~LaSGS~D-GtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~------~ 718 (819)
++ |-+++|+-..| +.|.|.|++.. .++.++++|.+.|++++|.|+...-++++| .|..+.+||+.+-- +
T Consensus 251 nkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG--DD~qaliWDl~q~~~~~~~dP 328 (364)
T KOG0290|consen 251 NKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG--DDCQALIWDLQQMPRENGEDP 328 (364)
T ss_pred CcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC--CcceEEEEecccccccCCCCc
Confidence 98 45677776555 46999999864 578999999999999999999998888887 89999999997532 3
Q ss_pred eEEEcCCCCeEEEEEcc-CCCEEEEE
Q psy10114 719 MQCVDTGSQVCNLAWSK-HSSELVST 743 (819)
Q Consensus 719 v~~l~~~s~V~sLafSp-dg~~Last 743 (819)
+.....++.|..+.|++ .+..++++
T Consensus 329 ilay~a~~EVNqi~Ws~~~~Dwiai~ 354 (364)
T KOG0290|consen 329 ILAYTAGGEVNQIQWSSSQPDWIAIC 354 (364)
T ss_pred hhhhhccceeeeeeecccCCCEEEEE
Confidence 33445678899999996 45666663
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.8e-14 Score=147.46 Aligned_cols=262 Identities=19% Similarity=0.270 Sum_probs=194.8
Q ss_pred CCeEEEEEcCCCceE-EEEeccCCCCCeEEEEEcCCC-CEEEEEecC-------ceEEEeecCCc---------eEEEEE
Q psy10114 532 GSCVYLWSACTSQVT-RLCDLSADGNSVTSVAWNERG-NLVAVGTHH-------GYVQVWDVSVA---------KQVHKL 593 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~-~l~~l~~h~~~VtsLafSpdG-~~LAsGs~D-------GtI~IWDl~tg---------k~i~tl 593 (819)
++.|.+.+...+.-. ....+..+.+.|..++-+|.. +.|+++..+ -.+.||.+... +++..+
T Consensus 39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L 118 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL 118 (370)
T ss_pred cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence 467777766544322 122455678999999999954 566666542 24789988543 233444
Q ss_pred e-cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEE-----ecccCCeEEEEECC--CCCEEEEEECCCeE
Q psy10114 594 V-GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRL-----VGHRQEVCGLKWSP--DNQYLASGGNDNRL 663 (819)
Q Consensus 594 ~-gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l-----~gH~~~VtsLafSp--dg~~LaSGS~DGtI 663 (819)
. .+-+.|.|+.| |++.+++-. |..|.+|++...... +..+ .++....++-+|+| ||+.+++. .|+++
T Consensus 119 dteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~-vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl 195 (370)
T KOG1007|consen 119 DTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKI-VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTL 195 (370)
T ss_pred CHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcch-heeecccccccccceecccccCCCCccceEEEe-CCCcE
Confidence 4 45668999999 677777766 889999999876531 1111 23566788899999 77777764 57899
Q ss_pred EEEECCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-ceeEEE-cCCCCeEEEEEccCCCEE
Q psy10114 664 YVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG-QPMQCV-DTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l-~~~s~V~sLafSpdg~~L 740 (819)
..||+++.+....+. .|...|..+.|+|+.+.+++++| .||.|++||++.- .+++.+ +|...|.++.|+|....|
T Consensus 196 ~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~g--DdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqL 273 (370)
T KOG1007|consen 196 QFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCG--DDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQL 273 (370)
T ss_pred EEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcC--CCccEEEEeccCCCccccccCCCceEEEEEEecCccceE
Confidence 999999988776665 68888999999999999999998 9999999999864 466666 466789999999988887
Q ss_pred EEEEecCCCeEEEEECCCC-----------------------------cEEEEEecCCCCEEEEEEec-CCCEEEEEeCC
Q psy10114 741 VSTHGYSQNQILVWKYPTL-----------------------------TQVAKLTGHSYRVLYLAMSP-DGEAIVTGAGD 790 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~-----------------------------k~l~sl~gH~~~VtsLafSp-DG~~LaSGS~D 790 (819)
+.+ |++|..|.+|...+- .++.++..|.+.|.+++||. |--.+|+-+.|
T Consensus 274 iLs-~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD 352 (370)
T KOG1007|consen 274 ILS-GGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD 352 (370)
T ss_pred EEe-cCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccC
Confidence 776 778999999864211 12345667999999999987 44567889999
Q ss_pred CcEEEEECC
Q psy10114 791 ETLRFWNVF 799 (819)
Q Consensus 791 GtIrIWdl~ 799 (819)
|.+.|=++.
T Consensus 353 GRviIs~V~ 361 (370)
T KOG1007|consen 353 GRVIISSVP 361 (370)
T ss_pred ceEEeecCC
Confidence 999886654
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-15 Score=171.18 Aligned_cols=284 Identities=16% Similarity=0.237 Sum_probs=219.3
Q ss_pred CcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 512 dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
...|+..+|-++.++++++.|..|+||+.+++.. +.+..+|++.|+.++.+.+..++|+++.|..|++|.+.++..+.
T Consensus 191 naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~--lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvs 268 (1113)
T KOG0644|consen 191 NAVYCAIFDRTGRYIITGSDDRLVKIWSMETARC--LASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVS 268 (1113)
T ss_pred hheeeeeeccccceEeecCccceeeeeeccchhh--hccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHH
Confidence 4568888888899999999999999999888765 45788999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccce-EEE-ecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSE-RRL-VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v-~~l-~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+.||++.|++++|++.. +.+.||++++||.+-...... ... ....+-+.++.|...+..+++|+.|+.-..|...
T Consensus 269 vLrghtgavtaiafsP~~--sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~ 346 (1113)
T KOG0644|consen 269 VLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFE 346 (1113)
T ss_pred HHhccccceeeeccCccc--cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhh
Confidence 999999999999998765 888999999999982110000 001 1123567788888888999999999988877653
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssD 748 (819)
... .+...+.-+.++.+-..+.++.- .+..+.+|++.+|+..+.. .+...+..+.++|-...++.. .+.|
T Consensus 347 ~l~------~~~~~lif~t~ssd~~~~~~~ar--~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~ms-ag~d 417 (1113)
T KOG0644|consen 347 QLA------WRSNLLIFVTRSSDLSSIVVTAR--NDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMS-AGYD 417 (1113)
T ss_pred Hhh------hhccceEEEeccccccccceeee--eeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhh-ccCC
Confidence 211 11222222222323333444433 6788999999999887766 456778899999988877765 5579
Q ss_pred CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecccc
Q psy10114 749 NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
|...|||+-.+.+++......+.+..-+||+||+.++....-|.+.|.....++.+.+..
T Consensus 418 gst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~k~ak 477 (1113)
T KOG0644|consen 418 GSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKSQKKAK 477 (1113)
T ss_pred CceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCccccccc
Confidence 999999999888877665445667788999999999988888999999887766554443
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-13 Score=144.46 Aligned_cols=238 Identities=14% Similarity=0.250 Sum_probs=184.4
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCC--eEEEEECCCCCccce
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDR--MILQRDVRTPNSQSE 632 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DG--tI~IWDi~t~~~~~v 632 (819)
...+..+.|+.+...|.+|+.|| .++++.+..............|..+-|+..+++..+.+. .+++.+.+.....+.
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe 83 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICE 83 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEE
Confidence 45677788999999999999998 678887765443333334455667778888777666543 478888776543222
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec---CCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE---HLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~---h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
. ....+|.++.++. +.|+++-++ .|+|||+++.+.+.++.. +...+.+++.++.+.+++.-++ ...|.|.
T Consensus 84 ~---~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s-~t~GdV~ 156 (391)
T KOG2110|consen 84 I---FFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGS-TTSGDVV 156 (391)
T ss_pred E---ecCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCC-CCCceEE
Confidence 2 2346788888864 456666554 499999999999888764 4455777777777777777654 5679999
Q ss_pred EEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCe-EEEEECCCCcEEEEEecCC--CCEEEEEEecCCCEEE
Q psy10114 710 FWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQ-ILVWKYPTLTQVAKLTGHS--YRVLYLAMSPDGEAIV 785 (819)
Q Consensus 710 IWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~-I~IWDl~s~k~l~sl~gH~--~~VtsLafSpDG~~La 785 (819)
+||+.+-+++..+ .|.+.+.+++|+++|..+++ +++.|+ |+|+.+++|+.+.+++... ..|.+++|++|+++|+
T Consensus 157 l~d~~nl~~v~~I~aH~~~lAalafs~~G~llAT--ASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~ 234 (391)
T KOG2110|consen 157 LFDTINLQPVNTINAHKGPLAALAFSPDGTLLAT--ASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLA 234 (391)
T ss_pred EEEcccceeeeEEEecCCceeEEEECCCCCEEEE--eccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEE
Confidence 9999999998888 47889999999999999999 566665 8999999999999998543 3578999999999999
Q ss_pred EEeCCCcEEEEECCCCc
Q psy10114 786 TGAGDETLRFWNVFSKV 802 (819)
Q Consensus 786 SGS~DGtIrIWdl~s~~ 802 (819)
+.|..++|.+|.++...
T Consensus 235 ~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 235 ASSNTETVHIFKLEKVS 251 (391)
T ss_pred EecCCCeEEEEEecccc
Confidence 99999999999998766
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=147.86 Aligned_cols=246 Identities=14% Similarity=0.261 Sum_probs=186.1
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC------ceEEEEEe-cCCCCeEEEEeC--CceeeeccCCCeEE
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV------AKQVHKLV-GHTARVGALAWN--GDMLSSGSRDRMIL 620 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t------gk~i~tl~-gHs~~V~sLawn--g~~LaSGS~DGtI~ 620 (819)
++.+|.+.|.++.|+.+|++|++|+.|..+++|+++. .+.+.... .|...|.|++|+ ...+.+|+.+++|.
T Consensus 51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI 130 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVI 130 (609)
T ss_pred hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeE
Confidence 4567999999999999999999999999999999863 35555554 456899999995 44899999999999
Q ss_pred EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-eeEE--EecCCCCEEEEEEcCCCCeEE
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-PLQT--YTEHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-~i~t--~~~h~~~VtsLafSPdg~~LL 697 (819)
..|+.+.+...+..-....+.|..+..+|..+.|++.+.++.|.+||.+... ++.. ..........+.|+|....++
T Consensus 131 ~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li 210 (609)
T KOG4227|consen 131 KHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALI 210 (609)
T ss_pred eeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeE
Confidence 9999997754444434445699999999999999999999999999998765 3222 223456678889999999888
Q ss_pred EEEccCCCCeEEEEECCCCce--------------------------------------------------eEEEcCC--
Q psy10114 698 ASGGGTADRCIRFWNTLTGQP--------------------------------------------------MQCVDTG-- 725 (819)
Q Consensus 698 aSGgGs~DgtIrIWDl~tg~~--------------------------------------------------v~~l~~~-- 725 (819)
++.+ ..+-+.+||.+..+. +...++.
T Consensus 211 ~~~~--~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~ 288 (609)
T KOG4227|consen 211 LVNS--ETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPN 288 (609)
T ss_pred Eecc--ccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCC
Confidence 8875 667788888763210 0011111
Q ss_pred -----CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC-----------------------cEEEEEecCCCCEEEEEE
Q psy10114 726 -----SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL-----------------------TQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 726 -----s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~-----------------------k~l~sl~gH~~~VtsLaf 777 (819)
..+.+++|..|.. +++ |+.+-.|.+|.++.. +.+..++||..-+..+.|
T Consensus 289 GY~N~~T~KS~~F~~D~~-v~t--GSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF 365 (609)
T KOG4227|consen 289 GYCNIKTIKSMTFIDDYT-VAT--GSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRF 365 (609)
T ss_pred cceeeeeeeeeeeeccee-eec--cCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceee
Confidence 1133445543333 444 888889999998521 124567899999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEECCC
Q psy10114 778 SPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 778 SpDG~~LaSGS~DGtIrIWdl~s 800 (819)
+|...+|++.+-...+++|.-..
T Consensus 366 ~~H~~~l~SSGVE~~~KlWS~~r 388 (609)
T KOG4227|consen 366 SQHNNLLVSSGVENSFKLWSDHR 388 (609)
T ss_pred cCCcceEeccchhhheecccccc
Confidence 99999999999999999997543
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.9e-13 Score=159.52 Aligned_cols=273 Identities=16% Similarity=0.200 Sum_probs=194.8
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEecc-CCCCCeEEEEEcC--CCCEEEEEecCceEEEeecC-----CceEEEEEe
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLS-ADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVS-----VAKQVHKLV 594 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~-~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~-----tgk~i~tl~ 594 (819)
...++++.....|.+||.+.++...-++.. .....|+.+.+-. |..++.+|+.||.|+||+-- +.+.+....
T Consensus 1076 ~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~ 1155 (1387)
T KOG1517|consen 1076 EPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWS 1155 (1387)
T ss_pred CceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeec
Confidence 356777777788999999988764432221 1246789998865 45789999999999999642 223444333
Q ss_pred cC-------CCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEE
Q psy10114 595 GH-------TARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLY 664 (819)
Q Consensus 595 gH-------s~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~ 664 (819)
+- .+.=.-++| ....|+++|.-..|+|||....... .....+....|+++.-+- .|+.+++|..||.|+
T Consensus 1156 ~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~-~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvR 1234 (1387)
T KOG1517|consen 1156 SLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVV-ADIPYGSSTLVTALSADLVHGNIIAAGFADGSVR 1234 (1387)
T ss_pred cccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeE-eecccCCCccceeecccccCCceEEEeecCCceE
Confidence 21 111134566 2335555555899999999875522 122233445577766543 468999999999999
Q ss_pred EEECCCCc---eeEEEecCCCC--EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE--EE----cCCCCeEEEEE
Q psy10114 665 VWNLHSMS---PLQTYTEHLAA--VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ--CV----DTGSQVCNLAW 733 (819)
Q Consensus 665 IWDl~t~~---~i~t~~~h~~~--VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~--~l----~~~s~V~sLaf 733 (819)
+||.+... .+...+.|.+. |..+.+.+.|-.-+++|+ .||.|++||++...... .+ +-++..+++..
T Consensus 1235 vyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs--~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~V 1312 (1387)
T KOG1517|consen 1235 VYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGS--QDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTV 1312 (1387)
T ss_pred EeecccCCccccceeecccCCcccceeEEeecCCCcceeeec--cCCeEEEEecccCcccccceeeeccccCccceeeee
Confidence 99997643 46777888877 999999998877667765 99999999999842221 12 22556999999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC-------CCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH-------SYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH-------~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+++...+++ |+. +.|+||++. |+++..++.+ .+.+.|++|+|-.-.+|.|+.|.+|.+|....+.
T Consensus 1313 H~hapiiAs--Gs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1313 HEHAPIIAS--GSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred ccCCCeeee--cCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 999999998 665 999999974 4444444322 3567999999999999999999999999987654
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=147.71 Aligned_cols=228 Identities=15% Similarity=0.270 Sum_probs=176.8
Q ss_pred CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe----CCceeeeccCCCeEEEEECCCCCccceEEEeccc-CCe
Q psy10114 568 NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW----NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR-QEV 642 (819)
Q Consensus 568 ~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw----ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~-~~V 642 (819)
+.+|++..+|.|++||..+++.+..++++...+..+.| .++.+.+|+.||+|++||+|...........++. ...
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 67999999999999999999999999999999999999 3568999999999999999998877667777776 566
Q ss_pred EEEEECCCCCEEEEEEC----CCeEEEEECCCCce-eEEE-ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 643 CGLKWSPDNQYLASGGN----DNRLYVWNLHSMSP-LQTY-TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~----DGtI~IWDl~t~~~-i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
.+++.+-.++.+++|+. |-.|.+||++..+. +..+ ..|...|+++.|+|....++++|+ .||-|.++|+...
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGS--vDGLvnlfD~~~d 198 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGS--VDGLVNLFDTKKD 198 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeec--ccceEEeeecCCC
Confidence 77887778888888864 56799999998765 5544 469999999999999999999986 9999999999764
Q ss_pred c----eeEEEcCCCCeEEEEEccCC-CEEEEEEecCCCeEEEEECCCCcEEEEEecCC------------CCEEEEEEec
Q psy10114 717 Q----PMQCVDTGSQVCNLAWSKHS-SELVSTHGYSQNQILVWKYPTLTQVAKLTGHS------------YRVLYLAMSP 779 (819)
Q Consensus 717 ~----~v~~l~~~s~V~sLafSpdg-~~LastsGssDg~I~IWDl~s~k~l~sl~gH~------------~~VtsLafSp 779 (819)
. .+..+.+++.|..+.|..++ +.+.+ -.......+|+++.+.....+.... ..+...-...
T Consensus 199 ~EeDaL~~viN~~sSI~~igw~~~~ykrI~c--lTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~ 276 (376)
T KOG1188|consen 199 NEEDALLHVINHGSSIHLIGWLSKKYKRIMC--LTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPG 276 (376)
T ss_pred cchhhHHHhhcccceeeeeeeecCCcceEEE--EEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCC
Confidence 3 35566888999999999888 23444 2357889999999887655443211 1111111223
Q ss_pred CCCEEEEEeC-CCcEEEEECC
Q psy10114 780 DGEAIVTGAG-DETLRFWNVF 799 (819)
Q Consensus 780 DG~~LaSGS~-DGtIrIWdl~ 799 (819)
++.+.+.++. -+..+++-+.
T Consensus 277 ~~~~~~l~g~~~n~~~~~~~~ 297 (376)
T KOG1188|consen 277 DKDTCALAGTDSNKGTIFPLV 297 (376)
T ss_pred CcceEEEeccccCceeEEEee
Confidence 4556666555 5666666554
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-13 Score=154.04 Aligned_cols=230 Identities=17% Similarity=0.139 Sum_probs=162.1
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---ceEEEeecCCceE--EEEEecCCCCeEEEEe-
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---GYVQVWDVSVAKQ--VHKLVGHTARVGALAW- 605 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---GtI~IWDl~tgk~--i~tl~gHs~~V~sLaw- 605 (819)
+..|++||....... .+..+...+.+.+|+|||+.|+.++.+ ..|.+||+.+++. +..+.+| ..+++|
T Consensus 183 ~~~i~i~d~dg~~~~---~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wS 256 (429)
T PRK01742 183 PYEVRVADYDGFNQF---IVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFS 256 (429)
T ss_pred eEEEEEECCCCCCce---EeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeEC
Confidence 368999998766533 344567789999999999999987654 4799999988753 3333343 346788
Q ss_pred -CCceeeec-cCCCeEEEE--ECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCCC-ceeEEEec
Q psy10114 606 -NGDMLSSG-SRDRMILQR--DVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHSM-SPLQTYTE 679 (819)
Q Consensus 606 -ng~~LaSG-S~DGtI~IW--Di~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~DGtI~IWDl~t~-~~i~t~~~ 679 (819)
+|+.|+.+ +.+|.+.+| |+.++. ...+..+...+....|+|||+.++.++ .+|...||++... .....+ .
T Consensus 257 PDG~~La~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~ 332 (429)
T PRK01742 257 PDGSRLAFASSKDGVLNIYVMGANGGT---PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-G 332 (429)
T ss_pred CCCCEEEEEEecCCcEEEEEEECCCCC---eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-c
Confidence 56677765 467866655 555443 345666777788999999999877665 5677888876432 222333 3
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEEC--C
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY--P 757 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl--~ 757 (819)
+.. ...+|+|+|+.+++++ .++ +.+||+.+++....... ....++.|+|+|+.++. ++.++...+|++ .
T Consensus 333 ~~~--~~~~~SpDG~~ia~~~---~~~-i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~--~s~~g~~~~l~~~~~ 403 (429)
T PRK01742 333 GRG--YSAQISADGKTLVMIN---GDN-VVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIY--SSTQGLGKVLQLVSA 403 (429)
T ss_pred CCC--CCccCCCCCCEEEEEc---CCC-EEEEECCCCCeEEecCC-CCCCCceECCCCCEEEE--EEcCCCceEEEEEEC
Confidence 333 4578999999887765 244 55699998876533222 23467889999999999 445777777765 3
Q ss_pred CCcEEEEEecCCCCEEEEEEecC
Q psy10114 758 TLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 758 s~k~l~sl~gH~~~VtsLafSpD 780 (819)
+++....+.+|.+.+...+|+|-
T Consensus 404 ~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 404 DGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred CCCceEEccCCCCCCCCcccCCC
Confidence 67888888889888999999984
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=153.06 Aligned_cols=257 Identities=17% Similarity=0.298 Sum_probs=189.1
Q ss_pred EEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-------CCCEEEEEecCceEEEeecCCce
Q psy10114 517 NLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-------RGNLVAVGTHHGYVQVWDVSVAK 588 (819)
Q Consensus 517 ~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-------dG~~LAsGs~DGtI~IWDl~tgk 588 (819)
.+++|.++ -++.++.|..+.+|+-.+.+...+..+.. ..--+.+..-+ ....++.++.||.+.|.+ +.++
T Consensus 18 c~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~-df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~-k~~r 95 (737)
T KOG1524|consen 18 CCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPD-DFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN-KSAR 95 (737)
T ss_pred EeecccccceEEEeccCceEEEeecccchhhhhhhCCc-ccCCccccccccccCCCCCcceEEEEcCCceEEEec-ccch
Confidence 57888875 57888888888887654443333222221 11111121111 235789999999999987 5677
Q ss_pred EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 589 QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
..+.+..|.+.+.+-.| +|.-|++++.||.|++|.-... ...++......|.|++|.|+.+.++.+.. +.+.|=
T Consensus 96 VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM---LRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IK 171 (737)
T KOG1524|consen 96 VERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM---LRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIK 171 (737)
T ss_pred hhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch---HHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEe
Confidence 77888999999999999 4779999999999999986542 22444556678999999998887766543 577777
Q ss_pred ECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec
Q psy10114 667 NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 667 Dl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs 746 (819)
-+.....+-+.+.|.+-|.++.|++... ++++|| .|-..++||-..........++.+|++++|.|+ +.++. |
T Consensus 172 pL~~n~k~i~WkAHDGiiL~~~W~~~s~-lI~sgG--ED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v--~- 244 (737)
T KOG1524|consen 172 PLAANSKIIRWRAHDGLVLSLSWSTQSN-IIASGG--EDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLL--W- 244 (737)
T ss_pred ecccccceeEEeccCcEEEEeecCcccc-ceeecC--CceeEEeecccCcccccCChhccceeeeeeccc-cceee--e-
Confidence 7777777888999999999999999887 677776 999999999876655666678899999999999 43333 2
Q ss_pred CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 747 SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
+-+..++ -....+.|..++||+||..++.|+..|.+.+=.
T Consensus 245 S~nt~R~-----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~ 284 (737)
T KOG1524|consen 245 SYNTARF-----------SSPRVGSIFNLSWSADGTQATCGTSTGQLIVAY 284 (737)
T ss_pred eeeeeee-----------cCCCccceEEEEEcCCCceeeccccCceEEEee
Confidence 1233331 123467899999999999999999999876543
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=155.07 Aligned_cols=229 Identities=17% Similarity=0.297 Sum_probs=175.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
..|..++|-|||..|+.+..+ .+.+||...|..+.++++|...|.|++| +|..++||+.|+.|.+|.-.-.. .
T Consensus 13 hci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG----~ 87 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG----I 87 (1081)
T ss_pred cchheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc----e
Confidence 378999999999998887755 6999999999999999999999999999 79999999999999999865433 2
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl 713 (819)
.-..|.+.|.|+.|+|-...|++++-. ..-+|........+ . .....+.+.+|..||.+++. | -.||+|.+=+-
T Consensus 88 LkYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K-~-kss~R~~~CsWtnDGqylal-G--~~nGTIsiRNk 161 (1081)
T KOG1538|consen 88 LKYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSK-H-KSSSRIICCSWTNDGQYLAL-G--MFNGTISIRNK 161 (1081)
T ss_pred eeeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHh-h-hhheeEEEeeecCCCcEEEE-e--ccCceEEeecC
Confidence 235699999999999999999998763 56788865543322 1 13567889999999996655 3 37999998864
Q ss_pred CCCceeEEE-c---CCCCeEEEEEccCCC-----EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEE
Q psy10114 714 LTGQPMQCV-D---TGSQVCNLAWSKHSS-----ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAI 784 (819)
Q Consensus 714 ~tg~~v~~l-~---~~s~V~sLafSpdg~-----~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~L 784 (819)
+|++...+ . ..++|.+++|+|... .+++ .+...++.++.+ +|+.+..-+.-.-...|+++-++|.++
T Consensus 162 -~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV--~DW~qTLSFy~L-sG~~Igk~r~L~FdP~CisYf~NGEy~ 237 (1081)
T KOG1538|consen 162 -NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAV--ADWGQTLSFYQL-SGKQIGKDRALNFDPCCISYFTNGEYI 237 (1081)
T ss_pred -CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEE--EeccceeEEEEe-cceeecccccCCCCchhheeccCCcEE
Confidence 44444344 2 457899999999753 2333 344555666654 455555444445567889999999999
Q ss_pred EEEeCCCcEEEEECC
Q psy10114 785 VTGAGDETLRFWNVF 799 (819)
Q Consensus 785 aSGS~DGtIrIWdl~ 799 (819)
..|+.|+.+.+|--+
T Consensus 238 LiGGsdk~L~~fTR~ 252 (1081)
T KOG1538|consen 238 LLGGSDKQLSLFTRD 252 (1081)
T ss_pred EEccCCCceEEEeec
Confidence 999999999988643
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=155.22 Aligned_cols=243 Identities=19% Similarity=0.228 Sum_probs=177.0
Q ss_pred ecCCeEEEEECCCeEEEEEcC------CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc-------
Q psy10114 521 WSSQNVLSVGLGSCVYLWSAC------TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA------- 587 (819)
Q Consensus 521 wS~~~LLa~g~Dg~V~LWd~~------tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg------- 587 (819)
.+...+++++.+|.+.+|+++ ...+.++.++.+|.++|.|++..+++.++++|+.||+|+.|++...
T Consensus 304 ~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~ 383 (577)
T KOG0642|consen 304 PSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSY 383 (577)
T ss_pred CCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCccccc
Confidence 345689999999999999983 2457788999999999999999999999999999999999965421
Q ss_pred ---eEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCC
Q psy10114 588 ---KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDN 661 (819)
Q Consensus 588 ---k~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DG 661 (819)
.....+.||.+.|+.++++ .+.|++++.||+++.|+...... .........+.-..+++-... ...++...-+
T Consensus 384 dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~ 462 (577)
T KOG0642|consen 384 DPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFG 462 (577)
T ss_pred CcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccc
Confidence 2345678999999999994 66899999999999999877553 111111112223444443222 1222222222
Q ss_pred eEEEEECCCCceeEEEec-------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEE
Q psy10114 662 RLYVWNLHSMSPLQTYTE-------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAW 733 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~-------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLaf 733 (819)
.-.+.|......+..+.. ....+..+.++|.+...+. +. .|+.|+++|..+++.+... .+...++++++
T Consensus 463 ~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~-~h--ed~~Ir~~dn~~~~~l~s~~a~~~svtslai 539 (577)
T KOG0642|consen 463 YTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFT-AH--EDRSIRFFDNKTGKILHSMVAHKDSVTSLAI 539 (577)
T ss_pred cccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEe-cc--cCCceecccccccccchheeeccceecceee
Confidence 223333343333333321 1234677888998875444 33 8999999999999988765 56788999999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS 769 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~ 769 (819)
.|+|.++++ |..|+.+++|.+.....+.....|.
T Consensus 540 ~~ng~~l~s--~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 540 DPNGPYLMS--GSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred cCCCceEEe--ecCCceeehhhccchheeecccccc
Confidence 999999999 8999999999998888777766664
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.3e-13 Score=147.80 Aligned_cols=233 Identities=25% Similarity=0.392 Sum_probs=170.6
Q ss_pred eEEEEECCCeEEEEEcCCC-------ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC--------C---
Q psy10114 525 NVLSVGLGSCVYLWSACTS-------QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS--------V--- 586 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg-------~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~--------t--- 586 (819)
.++++|.|..|++|.+..+ ++..+..+..|...|+++.|+|+|+.||+|+.+|.|.+|... +
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~ 107 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEAD 107 (434)
T ss_pred ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhh
Confidence 7899999999999987542 345566788999999999999999999999999999999765 2
Q ss_pred -----ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC
Q psy10114 587 -----AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 587 -----gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
....+.+.+|...|..++| ++..+++|+.|..+++||+..+. ....+.+|..-+.+++|.|-++++++-+.
T Consensus 108 ~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~--l~~~~~dh~~yvqgvawDpl~qyv~s~s~ 185 (434)
T KOG1009|consen 108 LNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ--LLAILDDHEHYVQGVAWDPLNQYVASKSS 185 (434)
T ss_pred hCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccce--eEeeccccccccceeecchhhhhhhhhcc
Confidence 2335567789999999999 67799999999999999999976 45778899999999999999999999988
Q ss_pred CCeEEEEECCCCceeEEEe----------c---------C----CCCEEEEEEcCCCCeEEEEEc-----cC--------
Q psy10114 660 DNRLYVWNLHSMSPLQTYT----------E---------H----LAAVKAIAWSPHHHGLLASGG-----GT-------- 703 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t~~----------~---------h----~~~VtsLafSPdg~~LLaSGg-----Gs-------- 703 (819)
|...+.+++...+.++... + | +.-...++|+|+|..++.-++ |.
T Consensus 186 dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYv 265 (434)
T KOG1009|consen 186 DRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYV 265 (434)
T ss_pred CcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEe
Confidence 8866666654332211111 0 1 111234566666653332211 00
Q ss_pred -----------------------------------------------------CCCeEEEEECCCCceeEEEc--CCCCe
Q psy10114 704 -----------------------------------------------------ADRCIRFWNTLTGQPMQCVD--TGSQV 728 (819)
Q Consensus 704 -----------------------------------------------------~DgtIrIWDl~tg~~v~~l~--~~s~V 728 (819)
..+.|.+||.++-.++..+. |-+.+
T Consensus 266 fsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nihy~~i 345 (434)
T KOG1009|consen 266 FSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIHYSAI 345 (434)
T ss_pred eccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEeccccccceEEEeeeeeeee
Confidence 12345555555555544442 34678
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
+.++|++||..++. .+.||...+..++..+.
T Consensus 346 TDiaws~dg~~l~v--SS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 346 TDIAWSDDGSVLLV--SSTDGFCSLVTFEPWEL 376 (434)
T ss_pred cceeecCCCcEEEE--eccCCceEEEEEcchhc
Confidence 99999999999999 66888777766654443
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.4e-13 Score=153.38 Aligned_cols=233 Identities=16% Similarity=0.272 Sum_probs=176.0
Q ss_pred ecCCeEEEEECCCeEEEEEcCCCceE---EE-EeccCCCCCeEEEEEcCCCC--EEEEEecCceEEEeecCCceE-----
Q psy10114 521 WSSQNVLSVGLGSCVYLWSACTSQVT---RL-CDLSADGNSVTSVAWNERGN--LVAVGTHHGYVQVWDVSVAKQ----- 589 (819)
Q Consensus 521 wS~~~LLa~g~Dg~V~LWd~~tg~~~---~l-~~l~~h~~~VtsLafSpdG~--~LAsGs~DGtI~IWDl~tgk~----- 589 (819)
++++.++.|..+|+|.+||...+... .+ .....|..+++.+.|..+.. -+++++.||.|..|+++.-..
T Consensus 253 ~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~ 332 (555)
T KOG1587|consen 253 FDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGL 332 (555)
T ss_pred CCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhc
Confidence 34567888889999999999876542 11 12345889999999987544 499999999999998764322
Q ss_pred -EEEEe------cCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccc------eEEEecccCCeEEEEECCCCCE
Q psy10114 590 -VHKLV------GHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQS------ERRLVGHRQEVCGLKWSPDNQY 653 (819)
Q Consensus 590 -i~tl~------gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~------v~~l~gH~~~VtsLafSpdg~~ 653 (819)
..... .....+++++| +.+.+++|+.+|.|..-+-...+... ......|.+.|.++.++|=+..
T Consensus 333 ~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k 412 (555)
T KOG1587|consen 333 LLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPK 412 (555)
T ss_pred ccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccc
Confidence 11111 22346788888 67899999999999874333322222 3355678899999999996655
Q ss_pred EEEEECCCeEEEEECC-CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--eeEEEcC-CCCeE
Q psy10114 654 LASGGNDNRLYVWNLH-SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--PMQCVDT-GSQVC 729 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~-t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l~~-~s~V~ 729 (819)
++..+.|.+|+||... ...++..+..+...|.+++|||....+++++. .||.+.+||+.... ++.+... ....+
T Consensus 413 ~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d--~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~ 490 (555)
T KOG1587|consen 413 NFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVD--GDGNLDIWDLLQDDEEPVLSQKVCSPALT 490 (555)
T ss_pred eeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEc--CCCceehhhhhccccCCcccccccccccc
Confidence 4444449999999988 77888888888888999999999999999976 89999999997643 3433332 34467
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
.+.|+++|+.+++ |...|.+.++++.
T Consensus 491 ~~~~s~~g~~lav--Gd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 491 RVRWSPNGKLLAV--GDANGTTHILKLS 516 (555)
T ss_pred eeecCCCCcEEEE--ecCCCcEEEEEcC
Confidence 7888889999999 9999999999985
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=156.18 Aligned_cols=274 Identities=19% Similarity=0.235 Sum_probs=192.7
Q ss_pred cCCeEEEEECCCeEEEEEcCCC-----ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--e-----E
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTS-----QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--K-----Q 589 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg-----~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--k-----~ 589 (819)
++..+++|+.||+|++||...- .....+++...+..+.++...+.|+.+|+|+.||.|++.+++.. + +
T Consensus 1060 ~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~ 1139 (1431)
T KOG1240|consen 1060 HTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQ 1139 (1431)
T ss_pred CCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeee
Confidence 3468999999999999997532 22223344445788999999999999999999999999998752 1 2
Q ss_pred EEEEecC--CCCeEEEEe---CCc-eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 590 VHKLVGH--TARVGALAW---NGD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 590 i~tl~gH--s~~V~sLaw---ng~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
.+....+ ..-|..-++ .+. .++.+..-+.|..||++........+.....+.|++++.+|.++.+++|+..|.+
T Consensus 1140 ~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l 1219 (1431)
T KOG1240|consen 1140 VRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQL 1219 (1431)
T ss_pred eecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceE
Confidence 2222222 223334444 234 7888889999999999987654445555566889999999999999999999999
Q ss_pred EEEECCCCceeEEEe-cCCCCEEEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCCC-------------
Q psy10114 664 YVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ------------- 727 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~-~h~~~VtsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~------------- 727 (819)
.+||++-+.++..+. .+..++..+..+|-.+ ...++++.+..+.|.+|++.+|.+...+-....
T Consensus 1220 ~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~ 1299 (1431)
T KOG1240|consen 1220 VLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDA 1299 (1431)
T ss_pred EEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccC
Confidence 999999999888775 3457888888777554 455555434688999999999977665522210
Q ss_pred -----e--EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEE-----------------------------E--------
Q psy10114 728 -----V--CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV-----------------------------A-------- 763 (819)
Q Consensus 728 -----V--~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l-----------------------------~-------- 763 (819)
+ ....+..-+..+++ |++|..|+.||....+.. .
T Consensus 1300 ~kp~~~~~~~~~~~~~~~~~lt--ggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~t 1377 (1431)
T KOG1240|consen 1300 RKPDSLAGISCGVCEKNGFLLT--GGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQT 1377 (1431)
T ss_pred CCCCcccceeeecccCCceeee--cCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhh
Confidence 1 11222222334444 789999999996422111 0
Q ss_pred -----------EE--------ecCCCCEEEEEEecC-CCEEEEEeCCCcEEEEE
Q psy10114 764 -----------KL--------TGHSYRVLYLAMSPD-GEAIVTGAGDETLRFWN 797 (819)
Q Consensus 764 -----------sl--------~gH~~~VtsLafSpD-G~~LaSGS~DGtIrIWd 797 (819)
.. ..|...|+++++-.+ ..+|++++.||.|++|.
T Consensus 1378 v~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1378 VGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred cCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 00 136667888887654 35888999999999994
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=155.17 Aligned_cols=227 Identities=21% Similarity=0.340 Sum_probs=167.8
Q ss_pred EECCCeEEEEEcCCCceEEEEec--cCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCc-------eEEEEEecCCC
Q psy10114 529 VGLGSCVYLWSACTSQVTRLCDL--SADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVA-------KQVHKLVGHTA 598 (819)
Q Consensus 529 ~g~Dg~V~LWd~~tg~~~~l~~l--~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tg-------k~i~tl~gHs~ 598 (819)
.|.+|.|-|+++.......-..+ -.....|+.+.|+| |...||+++.||.|++|.+..+ .....+.+|..
T Consensus 599 ~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~e 678 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGE 678 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccc
Confidence 36678999999864321110001 11357899999999 6789999999999999998754 34567789999
Q ss_pred CeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-ee
Q psy10114 599 RVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-PL 674 (819)
Q Consensus 599 ~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-~i 674 (819)
.|+++.|+ .+.|++++.|-+|++||+++... ...+.+|.+.|.+++|||||+.+|+.+.||+|++|+.++++ ++
T Consensus 679 KI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~--~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv 756 (1012)
T KOG1445|consen 679 KITSLRFHPLAADVLAVASYDSTIELWDLANAKL--YSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPV 756 (1012)
T ss_pred eEEEEEecchhhhHhhhhhccceeeeeehhhhhh--hheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCcc
Confidence 99999995 68999999999999999998764 47889999999999999999999999999999999998765 33
Q ss_pred EEEecC-CCCEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECCCC--ceeEE--EcCCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 675 QTYTEH-LAAVKAIAWSPHHHGLLASGG-GTADRCIRFWNTLTG--QPMQC--VDTGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 675 ~t~~~h-~~~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~tg--~~v~~--l~~~s~V~sLafSpdg~~LastsGssD 748 (819)
+.-++. ...--.|.|.-+|+.++++|- ....+.|.+||..+- .++.+ ++..-++.--.+.+|.+.++.+ |-.|
T Consensus 757 ~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lflt-GKGD 835 (1012)
T KOG1445|consen 757 YEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLT-GKGD 835 (1012)
T ss_pred ccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEe-cCCC
Confidence 332221 122345778889998888863 123467888887652 33332 2333333334556677777665 7889
Q ss_pred CeEEEEECCC
Q psy10114 749 NQILVWKYPT 758 (819)
Q Consensus 749 g~I~IWDl~s 758 (819)
..|.+|.+-.
T Consensus 836 ~~v~~yEv~~ 845 (1012)
T KOG1445|consen 836 RFVNMYEVIY 845 (1012)
T ss_pred ceEEEEEecC
Confidence 9999998753
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.7e-12 Score=143.97 Aligned_cols=237 Identities=15% Similarity=0.132 Sum_probs=162.8
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec---CceEEEeecCCceEEEEEecCCCCeEEEEe--CC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH---HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~---DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng 607 (819)
..|.++|........+. .+...+.+.+|+|||+.|+..+. +..+.+||+.+++... +....+.+.+.+| +|
T Consensus 179 ~~l~~~d~dg~~~~~lt---~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG 254 (429)
T PRK03629 179 YELRVSDYDGYNQFVVH---RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDG 254 (429)
T ss_pred eeEEEEcCCCCCCEEee---cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCC
Confidence 37999998776654432 34568999999999999987542 4579999998875432 2223333456778 56
Q ss_pred ceeeec-cCCC--eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCCceeEEEecCC
Q psy10114 608 DMLSSG-SRDR--MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-N--RLYVWNLHSMSPLQTYTEHL 681 (819)
Q Consensus 608 ~~LaSG-S~DG--tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-G--tI~IWDl~t~~~i~t~~~h~ 681 (819)
+.|+.. +.+| .|.+||+.+++. ..+..+...+....|+|||+.|+.++.+ + .|.++|+.+++. ..+....
T Consensus 255 ~~La~~~~~~g~~~I~~~d~~tg~~---~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~ 330 (429)
T PRK03629 255 SKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEG 330 (429)
T ss_pred CEEEEEEcCCCCcEEEEEECCCCCE---EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCC
Confidence 666643 4444 588899987653 3444445567889999999999887764 3 466667776654 3444444
Q ss_pred CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC-CCeEEEEECCCCc
Q psy10114 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS-QNQILVWKYPTLT 760 (819)
Q Consensus 682 ~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss-Dg~I~IWDl~s~k 760 (819)
......+|+|+|+.++.++.......|.+||+.+++.. .+.......+..|+|||+.++..+... ...+.++++ +++
T Consensus 331 ~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~ 408 (429)
T PRK03629 331 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGR 408 (429)
T ss_pred CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCC
Confidence 55667899999999887764223356889999888644 333333345788999999999854321 123677777 566
Q ss_pred EEEEEecCCCCEEEEEEec
Q psy10114 761 QVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 761 ~l~sl~gH~~~VtsLafSp 779 (819)
....+.+|.+.+...+|+|
T Consensus 409 ~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 409 FKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CeEECccCCCCcCCcccCC
Confidence 6677788888899999987
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=153.41 Aligned_cols=212 Identities=21% Similarity=0.397 Sum_probs=166.3
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe----CCceeeeccCCCeEEEEE
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW----NGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw----ng~~LaSGS~DGtI~IWD 623 (819)
..+.+|++.|+|++|+.+|.+|++|+.|-.+.|||.-..|.+..+. ||.+.|.++.| +..++++|..|..|+++|
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd 123 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD 123 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence 3678999999999999999999999999999999999888888775 89999999999 566899999999999999
Q ss_pred CCCCC--------ccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCcee----------EEEecCCCCE
Q psy10114 624 VRTPN--------SQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPL----------QTYTEHLAAV 684 (819)
Q Consensus 624 i~t~~--------~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i----------~t~~~h~~~V 684 (819)
+...+ .........|...|..++-.|++ ..+.++++||+|+-+|++..... ..+...--..
T Consensus 124 l~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~liel 203 (758)
T KOG1310|consen 124 LDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIEL 203 (758)
T ss_pred cccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhee
Confidence 98521 12334566788999999999988 78999999999999999863211 1111223456
Q ss_pred EEEEEcCCCCeEEEEEccCCCCeEEEEECCC--------Cc----------eeEEEcCC-------------CCeEEEEE
Q psy10114 685 KAIAWSPHHHGLLASGGGTADRCIRFWNTLT--------GQ----------PMQCVDTG-------------SQVCNLAW 733 (819)
Q Consensus 685 tsLafSPdg~~LLaSGgGs~DgtIrIWDl~t--------g~----------~v~~l~~~-------------s~V~sLaf 733 (819)
+++..+|...++++.|+ .|-..++||.+. +. +++.+..+ ..++-+.|
T Consensus 204 k~ltisp~rp~~laVGg--sdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtf 281 (758)
T KOG1310|consen 204 KCLTISPSRPYYLAVGG--SDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTF 281 (758)
T ss_pred eeeeecCCCCceEEecC--CCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEE
Confidence 89999999999999987 899999999432 11 12222111 11456899
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEE
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAK 764 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~s 764 (819)
+|+|.++++ ......|.++|+..++....
T Consensus 282 npNGtElLv--s~~gEhVYlfdvn~~~~~~~ 310 (758)
T KOG1310|consen 282 NPNGTELLV--SWGGEHVYLFDVNEDKSPTP 310 (758)
T ss_pred CCCCcEEEE--eeCCeEEEEEeecCCCCcee
Confidence 999999998 55567899999987665443
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.7e-12 Score=137.04 Aligned_cols=225 Identities=12% Similarity=0.146 Sum_probs=154.0
Q ss_pred EEEecCceEEEeecCC-ce--EEEEEecCCCCeEEEEe--CCceeeec-cCCCeEEEEECCC-CCccceEEEecccCCeE
Q psy10114 571 AVGTHHGYVQVWDVSV-AK--QVHKLVGHTARVGALAW--NGDMLSSG-SRDRMILQRDVRT-PNSQSERRLVGHRQEVC 643 (819)
Q Consensus 571 AsGs~DGtI~IWDl~t-gk--~i~tl~gHs~~V~sLaw--ng~~LaSG-S~DGtI~IWDi~t-~~~~~v~~l~gH~~~Vt 643 (819)
++...++.|.+||+.+ ++ .+..+. +.+....+++ +++.|+++ ..++.|.+|+++. +........ ...+..+
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p~ 83 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSPT 83 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCce
Confidence 3346689999999964 33 445554 3345566777 56677655 4688999999973 221111221 2334578
Q ss_pred EEEECCCCCEEEEEEC-CCeEEEEECCC-Cc---eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 644 GLKWSPDNQYLASGGN-DNRLYVWNLHS-MS---PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 644 sLafSpdg~~LaSGS~-DGtI~IWDl~t-~~---~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
.++++|+++.+++++. ++.|.+||+.+ +. .+..+. +......++++|+++.++++.. .++.|.+||+.+...
T Consensus 84 ~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~--~~~~v~v~d~~~~g~ 160 (330)
T PRK11028 84 HISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCL--KEDRIRLFTLSDDGH 160 (330)
T ss_pred EEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeC--CCCEEEEEEECCCCc
Confidence 8999999998887764 88999999964 32 223222 2334577889999999988765 789999999976332
Q ss_pred eE-------EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC--C--cEEEEEecC------CCCEEEEEEecCC
Q psy10114 719 MQ-------CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT--L--TQVAKLTGH------SYRVLYLAMSPDG 781 (819)
Q Consensus 719 v~-------~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s--~--k~l~sl~gH------~~~VtsLafSpDG 781 (819)
+. ....+.....++|+|+|++++++ ...++.|.+|++.. + +.+.++..+ ......+.++|||
T Consensus 161 l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~-~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg 239 (330)
T PRK11028 161 LVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCV-NELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDG 239 (330)
T ss_pred ccccCCCceecCCCCCCceEEECCCCCEEEEE-ecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCC
Confidence 21 22345667889999999999885 33589999999973 2 234444322 1123468899999
Q ss_pred CEEEEEeC-CCcEEEEECCCC
Q psy10114 782 EAIVTGAG-DETLRFWNVFSK 801 (819)
Q Consensus 782 ~~LaSGS~-DGtIrIWdl~s~ 801 (819)
++++++.. ++.|.+|++...
T Consensus 240 ~~lyv~~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 240 RHLYACDRTASLISVFSVSED 260 (330)
T ss_pred CEEEEecCCCCeEEEEEEeCC
Confidence 99998754 789999999654
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-14 Score=164.46 Aligned_cols=242 Identities=19% Similarity=0.311 Sum_probs=184.1
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+-+|...|.|+.|...|.++++|+.|..|+||..+++.++....||++.++.++.+ .-.++++|.|..|++|.+..+
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~ 264 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG 264 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCC
Confidence 466899999999999999999999999999999999999999999999999999994 447899999999999999986
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE----e-cCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY----T-EHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~----~-~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
. .+..+.+|++.|++++|+|-. +.+.||++++||.+- .+.... + ....-+.++.|...+..+++ |
T Consensus 265 ~--pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~T---g 334 (1113)
T KOG0644|consen 265 A--PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSILFENNGDRFLT---G 334 (1113)
T ss_pred c--hHHHHhccccceeeeccCccc----cCCCCCceEeccccc-cccccCCCCCCcccccceeeeecccccccccc---c
Confidence 6 567889999999999999954 778999999999871 111111 0 12345666677766664443 3
Q ss_pred CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC
Q psy10114 703 TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG 781 (819)
+.|+.-+.|.+..-.. ....+.-+..+.+.+ +.++ .-.+-.+.+|++.+|...+.+.+|...+..+.++|-+
T Consensus 335 s~d~ea~n~e~~~l~~-----~~~~lif~t~ssd~~~~~~~--ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn 407 (1113)
T KOG0644|consen 335 SRDGEARNHEFEQLAW-----RSNLLIFVTRSSDLSSIVVT--ARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFN 407 (1113)
T ss_pred cCCcccccchhhHhhh-----hccceEEEecccccccccee--eeeeeEeeeeecccchhhhhhcccccceeeeeecCCC
Confidence 4788777776542111 001111111121222 2333 4567789999999999999999999999999999955
Q ss_pred C-EEEEEeCCCcEEEEECCCCceecccc
Q psy10114 782 E-AIVTGAGDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 782 ~-~LaSGS~DGtIrIWdl~s~~~~~k~~ 808 (819)
. ...+++.||...|||+..+.+.+...
T Consensus 408 ~ri~msag~dgst~iwdi~eg~pik~y~ 435 (1113)
T KOG0644|consen 408 PRIAMSAGYDGSTIIWDIWEGIPIKHYF 435 (1113)
T ss_pred cHhhhhccCCCceEeeecccCCcceeee
Confidence 4 45578999999999999887665543
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.7e-12 Score=129.01 Aligned_cols=263 Identities=14% Similarity=0.187 Sum_probs=183.8
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCC--------ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE-
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTS--------QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ- 589 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg--------~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~- 589 (819)
++.+++.++++..+|.|.+..+.+- ....+...++|.++|..++|. ..+|.+|+ ||.|+=|.......
T Consensus 18 ~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es 94 (325)
T KOG0649|consen 18 ISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEES 94 (325)
T ss_pred hCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhh
Confidence 4445678999999999999987531 122344567899999999998 44666666 49999987653221
Q ss_pred -----EEEEe--cC-----CCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE
Q psy10114 590 -----VHKLV--GH-----TARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA 655 (819)
Q Consensus 590 -----i~tl~--gH-----s~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La 655 (819)
+...+ .| -..|+++..+ .+-++.++.|+.++.||+++++ ..+.+.+|++-|.++.--.....++
T Consensus 95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~--i~r~~rGHtDYvH~vv~R~~~~qil 172 (325)
T KOG0649|consen 95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGR--IQREYRGHTDYVHSVVGRNANGQIL 172 (325)
T ss_pred ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCE--EEEEEcCCcceeeeeeecccCccee
Confidence 11111 12 2356777664 4456666699999999999987 4588999999999999866666899
Q ss_pred EEECCCeEEEEECCCCceeEEEecC----------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC
Q psy10114 656 SGGNDNRLYVWNLHSMSPLQTYTEH----------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725 (819)
Q Consensus 656 SGS~DGtI~IWDl~t~~~i~t~~~h----------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~ 725 (819)
+|++||++++||.++++.++.+... ...|.+++.+.+ -+++|+ ...+.+|++++.++...+...
T Consensus 173 sG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed---WlvCGg---Gp~lslwhLrsse~t~vfpip 246 (325)
T KOG0649|consen 173 SGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED---WLVCGG---GPKLSLWHLRSSESTCVFPIP 246 (325)
T ss_pred ecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc---eEEecC---CCceeEEeccCCCceEEEecc
Confidence 9999999999999999988877531 223566665443 445554 578999999999999999999
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC-CEEEEEeCCCcEEEEE
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWN 797 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG-~~LaSGS~DGtIrIWd 797 (819)
..+..+.|..| .+++ ++..+.|.-|.+. |.............++..++..- ++|-.++..+.+.++.
T Consensus 247 a~v~~v~F~~d--~vl~--~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 247 ARVHLVDFVDD--CVLI--GGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred cceeEeeeecc--eEEE--eccccceeeeeec-cEEEEeccCCccceeeecccCCceEEEEecccceeeeeee
Confidence 99999998544 4444 5566788888764 44434444434445555554433 3444455666666653
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-13 Score=139.60 Aligned_cols=194 Identities=28% Similarity=0.444 Sum_probs=156.2
Q ss_pred eEEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEec-----cCCCCCeEEEEEcC--CCCEEEEEecCceEEEeecC
Q psy10114 515 YLNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDL-----SADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVS 585 (819)
Q Consensus 515 yv~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l-----~~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~ 585 (819)
-++++.|.++ .+++. .+..|.+|+...+... ...+ ..+....++-+|+| +|+.+++.+ |++++.||++
T Consensus 125 ~i~cvew~Pns~klasm-~dn~i~l~~l~ess~~-vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~R 201 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASM-DDNNIVLWSLDESSKI-VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLR 201 (370)
T ss_pred ceeeEEEcCCCCeeEEe-ccCceEEEEcccCcch-heeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEcc
Confidence 5788888864 45544 4899999999877542 1111 22456788999998 788887754 7899999999
Q ss_pred CceEEEEEe-cCCCCeEEEEeCCc---eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC-CCEEEEEECC
Q psy10114 586 VAKQVHKLV-GHTARVGALAWNGD---MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGGND 660 (819)
Q Consensus 586 tgk~i~tl~-gHs~~V~sLawng~---~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~D 660 (819)
+.++...+. .|...|..+.||++ +|++|+.||.|++||.+..+ ..+..+.+|...|.++.|+|. .+++++||.|
T Consensus 202 T~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk-~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD 280 (370)
T KOG1007|consen 202 TMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK-FPVQELPGHSHWVWAVRFNPEHDQLILSGGSD 280 (370)
T ss_pred chhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC-ccccccCCCceEEEEEEecCccceEEEecCCC
Confidence 888777765 79999999999755 89999999999999999877 467899999999999999994 5678999999
Q ss_pred CeEEEEECCCCc-----------------------------eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 661 NRLYVWNLHSMS-----------------------------PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 661 GtI~IWDl~t~~-----------------------------~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
..|.+|...+-. .+.++..|...|.+++|+.-...++++-+ .||.+.|=
T Consensus 281 s~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLS--YDGRviIs 358 (370)
T KOG1007|consen 281 SAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLS--YDGRVIIS 358 (370)
T ss_pred ceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEec--cCceEEee
Confidence 999999753211 24567789999999999999999999986 99998876
Q ss_pred ECC
Q psy10114 712 NTL 714 (819)
Q Consensus 712 Dl~ 714 (819)
.+.
T Consensus 359 ~V~ 361 (370)
T KOG1007|consen 359 SVP 361 (370)
T ss_pred cCC
Confidence 553
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-12 Score=137.44 Aligned_cols=222 Identities=19% Similarity=0.280 Sum_probs=176.2
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---eEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEEC-CCCC
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDV-RTPN 628 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---k~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi-~t~~ 628 (819)
.++|+|.+|++|+..+|++..+..|.||..... +..++++.|...|++++|+ .+.|++|+.|+.-++|.. ..+.
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 578999999999999999999999999988655 5788999999999999994 679999999999999998 6666
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce----eEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP----LQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
......+..++...+++.|+|.++.+|+|+....|.||-.+..+- ...-+.+...|.+++|+|++- ++++|+ .
T Consensus 90 WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnV-LlaaGs--~ 166 (361)
T KOG1523|consen 90 WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNV-LLAAGS--T 166 (361)
T ss_pred eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcc-eecccc--c
Confidence 677788888999999999999999999999999999998765432 122234678899999999876 555554 8
Q ss_pred CCeEEEEECC-----C-------------CceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc-EEEE
Q psy10114 705 DRCIRFWNTL-----T-------------GQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT-QVAK 764 (819)
Q Consensus 705 DgtIrIWDl~-----t-------------g~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k-~l~s 764 (819)
|+..|++..- . |+.+.+. ..++.+..+.|+|+|..++- .+.|+.+.+-|..... .+..
T Consensus 167 D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~law--v~Hds~v~~~da~~p~~~v~~ 244 (361)
T KOG1523|consen 167 DGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAW--VGHDSTVSFVDAAGPSERVQS 244 (361)
T ss_pred CcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeE--ecCCCceEEeecCCCchhccc
Confidence 9999998642 1 2222333 45677999999999999998 5589999999976554 3444
Q ss_pred EecCCCCEEEEEEecCC
Q psy10114 765 LTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 765 l~gH~~~VtsLafSpDG 781 (819)
...-.-+..++.|-.+.
T Consensus 245 ~~~~~lP~ls~~~ise~ 261 (361)
T KOG1523|consen 245 VATAQLPLLSVSWISEN 261 (361)
T ss_pred hhhccCCceeeEeecCC
Confidence 43333667777776544
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=149.74 Aligned_cols=210 Identities=16% Similarity=0.168 Sum_probs=148.9
Q ss_pred CceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCC---CeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 576 HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRD---RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 576 DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~D---GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
+..|.+||.+... .+.+..|...+.+.+| +|+.|+.++.+ ..|++||+.+++...+..+.+| ....+|+||
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCC
Confidence 4689999986544 5667778888999999 57778776543 4799999988664333333333 346899999
Q ss_pred CCEEEEEE-CCCeEE--EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-CceeEEEcCCC
Q psy10114 651 NQYLASGG-NDNRLY--VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-GQPMQCVDTGS 726 (819)
Q Consensus 651 g~~LaSGS-~DGtI~--IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-g~~v~~l~~~s 726 (819)
|+.|+.++ .+|.+. +||+.+++ ...+..+...+.+.+|+|+|+.+++++. .++..++|++.. +.....+....
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~--~~g~~~I~~~~~~~~~~~~l~~~~ 335 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSD--RSGSPQVYRMSASGGGASLVGGRG 335 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEEC--CCCCceEEEEECCCCCeEEecCCC
Confidence 99988765 577654 55666655 4556667777889999999998887764 567778887643 22223333322
Q ss_pred CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
.+..|+|||+.+++++ .+ .+.+||+.+++.......+ ...+++|+|||++|+.++.+|...+|++.
T Consensus 336 --~~~~~SpDG~~ia~~~--~~-~i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~ 401 (429)
T PRK01742 336 --YSAQISADGKTLVMIN--GD-NVVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLV 401 (429)
T ss_pred --CCccCCCCCCEEEEEc--CC-CEEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEE
Confidence 4578999999998853 33 4667999888754322222 34568899999999999999998888763
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.6e-11 Score=127.73 Aligned_cols=275 Identities=18% Similarity=0.267 Sum_probs=198.0
Q ss_pred EEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC--ceEEEeecCCceEEEE
Q psy10114 516 LNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH--GYVQVWDVSVAKQVHK 592 (819)
Q Consensus 516 v~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D--GtI~IWDl~tgk~i~t 592 (819)
++.+.|+++ .+++.|....-++++.+.... .......+..|.-+-|+ ..++|..+.+ ..+++.+.+++..+..
T Consensus 8 i~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k--~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~ICe 83 (391)
T KOG2110|consen 8 INFIGFNQDSTLLSVGSKDGYKIFSCSPFEK--CFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTICE 83 (391)
T ss_pred eeeeeeccceeEEEccCCCceeEEecCchHH--hhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCceEEE
Confidence 444557765 577777777788888765432 11222223455556666 4566666554 3589999888877776
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccce-EEEecccCCeEEEEECCCCCEEEEEE--CCCeEEEEECC
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSE-RRLVGHRQEVCGLKWSPDNQYLASGG--NDNRLYVWNLH 669 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v-~~l~gH~~~VtsLafSpdg~~LaSGS--~DGtI~IWDl~ 669 (819)
+. -...|.++.+|.+.|+++-.+. |+|+|+++.+.... .....+...+++++++.++.++|.-+ ..|.|.+||..
T Consensus 84 ~~-fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~ 161 (391)
T KOG2110|consen 84 IF-FPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTI 161 (391)
T ss_pred Ee-cCCceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcc
Confidence 65 4567999999999988887766 99999998663221 22235667788888888888998643 46889999999
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe-EEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEEEEe
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC-IRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt-IrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~LastsG 745 (819)
+-+++..+..|.+++.+++|+++|. ++|+++ ..|+ ||++.+.+|+.+.++.-+ ..|.+++|++++++|.+ .
T Consensus 162 nl~~v~~I~aH~~~lAalafs~~G~-llATAS--eKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~--s 236 (391)
T KOG2110|consen 162 NLQPVNTINAHKGPLAALAFSPDGT-LLATAS--EKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAA--S 236 (391)
T ss_pred cceeeeEEEecCCceeEEEECCCCC-EEEEec--cCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEE--e
Confidence 9999999999999999999999998 455554 4554 799999999999999655 46899999999999998 5
Q ss_pred cCCCeEEEEECCCCc---------------------------E----------EEEEecCCCCE-EEEEEe--cCCCEEE
Q psy10114 746 YSQNQILVWKYPTLT---------------------------Q----------VAKLTGHSYRV-LYLAMS--PDGEAIV 785 (819)
Q Consensus 746 ssDg~I~IWDl~s~k---------------------------~----------l~sl~gH~~~V-tsLafS--pDG~~La 785 (819)
++.++|.+|.+..-. + .+..+...+.. ..+++. ++...+.
T Consensus 237 S~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~ 316 (391)
T KOG2110|consen 237 SNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVL 316 (391)
T ss_pred cCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEE
Confidence 678999999874211 0 00111111111 223333 4678899
Q ss_pred EEeCCCcEEEEECCCC
Q psy10114 786 TGAGDETLRFWNVFSK 801 (819)
Q Consensus 786 SGS~DGtIrIWdl~s~ 801 (819)
.++.||.++.+++..+
T Consensus 317 vas~dG~~y~y~l~~~ 332 (391)
T KOG2110|consen 317 VASYDGHLYSYRLPPK 332 (391)
T ss_pred EEEcCCeEEEEEcCCC
Confidence 9999999999998754
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.9e-13 Score=149.45 Aligned_cols=204 Identities=20% Similarity=0.361 Sum_probs=157.3
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGAL 603 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sL 603 (819)
+.++.++.||.+.+-+- .+++++ ....|.+.+.|-.|++||.-|++++.||.|++|. ++|-.-.++-....+|.|+
T Consensus 76 d~~~i~s~DGkf~il~k-~~rVE~--sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNK-SARVER--SISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCA 151 (737)
T ss_pred ceEEEEcCCceEEEecc-cchhhh--hhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEE
Confidence 45778889999888874 444544 4678999999999999999999999999999998 4555445555667899999
Q ss_pred EeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC
Q psy10114 604 AWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 604 awn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h 680 (819)
+|. .+.+.+.+ +.+.+=.+.... .......|.+-|.++.|++..+.+++||+|-..+|||. .|..+..-..|
T Consensus 152 ~W~p~S~~vl~c~g--~h~~IKpL~~n~--k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ 226 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQG--GHISIKPLAANS--KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAE 226 (737)
T ss_pred EECCCCCceEEecC--CeEEEeeccccc--ceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChh
Confidence 993 33555544 345554444432 45778999999999999999999999999999999996 46677777789
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
..+|++++|.|+. +++.++ -++.|+=. ...+.|.+++||+||..+++ |...|.+.+
T Consensus 227 ey~ITSva~npd~--~~~v~S---~nt~R~~~----------p~~GSifnlsWS~DGTQ~a~--gt~~G~v~~ 282 (737)
T KOG1524|consen 227 EYAITSVAFNPEK--DYLLWS---YNTARFSS----------PRVGSIFNLSWSADGTQATC--GTSTGQLIV 282 (737)
T ss_pred ccceeeeeecccc--ceeeee---eeeeeecC----------CCccceEEEEEcCCCceeec--cccCceEEE
Confidence 9999999999993 455543 34555222 22467899999999999998 777777655
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-11 Score=131.64 Aligned_cols=275 Identities=19% Similarity=0.280 Sum_probs=185.9
Q ss_pred eEEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCc----
Q psy10114 515 YLNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVA---- 587 (819)
Q Consensus 515 yv~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tg---- 587 (819)
.+..++|+.. .++.++.|..|+++|........+.. ..+..|+|++|-|.+ +.|++|+..| |.||.....
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~ksst~pt~Lks--~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~ 176 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLKS--VSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN 176 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCCCCCceecc--hhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence 4667889875 47788999999999987744443322 235789999999954 6888888866 899986521
Q ss_pred eEE----------EEEecCCCCeEEEEe--CCceeeecc-CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE
Q psy10114 588 KQV----------HKLVGHTARVGALAW--NGDMLSSGS-RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 588 k~i----------~tl~gHs~~V~sLaw--ng~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L 654 (819)
+.+ ..-.+| ..|+++.| +|..+++++ .|..|.+||++++....+. ....+.++-+.|||||.+|
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSPdgd~l 253 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSPDGDVL 253 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcCCCCEE
Confidence 211 122244 68999999 466888777 4678999999998865544 2344678899999999999
Q ss_pred EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC----C--------cee---
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT----G--------QPM--- 719 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t----g--------~~v--- 719 (819)
+.++-|+..++|+.....-.....-..+.|...+|+|+|..++.+.+ +.-++|.+.. + +.+
T Consensus 254 faAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s----gsp~lysl~f~~~~~~~~~~~~~k~~lli 329 (445)
T KOG2139|consen 254 FAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS----GSPRLYSLTFDGEDSVFLRPQSIKRVLLI 329 (445)
T ss_pred EEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc----CCceEEEEeecCCCccccCcccceeeeee
Confidence 99999999999965433222222234569999999999999998875 2233443321 0 001
Q ss_pred EEE-----c-----CCCCeEEEEEccCCCEEEEEEecCC------CeEEEEECCCCcEEEEE-ecC--CCCEEEEEEec-
Q psy10114 720 QCV-----D-----TGSQVCNLAWSKHSSELVSTHGYSQ------NQILVWKYPTLTQVAKL-TGH--SYRVLYLAMSP- 779 (819)
Q Consensus 720 ~~l-----~-----~~s~V~sLafSpdg~~LastsGssD------g~I~IWDl~s~k~l~sl-~gH--~~~VtsLafSp- 779 (819)
..+ . ..+...+++|.|.|.+++++--+.+ ..|.+||.+..-.+.-. -+. ......++|+|
T Consensus 330 aDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl 409 (445)
T KOG2139|consen 330 ADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPL 409 (445)
T ss_pred ccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeec
Confidence 111 1 1467889999999999999542222 34667776644333222 111 11245566665
Q ss_pred --CCCEEEEEeCCCcEEEEECC
Q psy10114 780 --DGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 780 --DG~~LaSGS~DGtIrIWdl~ 799 (819)
+|.+|..+=..|.+.-|++.
T Consensus 410 ~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 410 KNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred ccCCcEEEEEeccCceEeeeeE
Confidence 67788888888888888764
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-11 Score=139.55 Aligned_cols=236 Identities=14% Similarity=0.144 Sum_probs=164.0
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec---CceEEEeecCCceEEEEEecCCCCeEEEEe--CC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH---HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~---DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng 607 (819)
..|+++|..+..... +..+...+.+.+|+|||+.|+..+. +..|.+||+.+++. ..+..+.+.+.+.+| +|
T Consensus 182 ~~l~~~d~dg~~~~~---lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG 257 (435)
T PRK05137 182 KRLAIMDQDGANVRY---LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDG 257 (435)
T ss_pred eEEEEECCCCCCcEE---EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCC
Confidence 478999987665544 3346678999999999999988764 46899999988765 345556667778888 56
Q ss_pred cee-eeccCCCe--EEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCCceeEEEecCC
Q psy10114 608 DML-SSGSRDRM--ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-N--RLYVWNLHSMSPLQTYTEHL 681 (819)
Q Consensus 608 ~~L-aSGS~DGt--I~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-G--tI~IWDl~t~~~i~t~~~h~ 681 (819)
+.| ++.+.+|. |.++|+.+++. ..+..+........|+|||+.++..+.. | .|+++|+.+++. +.+..+.
T Consensus 258 ~~la~~~~~~g~~~Iy~~d~~~~~~---~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~ 333 (435)
T PRK05137 258 RKVVMSLSQGGNTDIYTMDLRSGTT---TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGG 333 (435)
T ss_pred CEEEEEEecCCCceEEEEECCCCce---EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCC
Confidence 655 45565655 77778877542 4455566667789999999998887743 3 688899876654 4444445
Q ss_pred CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCC----CeEEEEECC
Q psy10114 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQ----NQILVWKYP 757 (819)
Q Consensus 682 ~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssD----g~I~IWDl~ 757 (819)
..+....|+|+|+.++.+.....+..|.+||+.++.. ..+..+..+....|+|||+.++.++.... ..+.++|+.
T Consensus 334 ~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~ 412 (435)
T PRK05137 334 GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT 412 (435)
T ss_pred CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence 5667789999999988876422335788999865543 44444445778999999999887643222 368888876
Q ss_pred CCcEEEEEecCCCCEEEEEEec
Q psy10114 758 TLTQVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 758 s~k~l~sl~gH~~~VtsLafSp 779 (819)
.+.. ..+. ..+.+...+|+|
T Consensus 413 g~~~-~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 413 GRNE-REVP-TPGDASDPAWSP 432 (435)
T ss_pred CCce-EEcc-CCCCccCcccCC
Confidence 5544 3443 244466677765
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-11 Score=140.28 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=162.0
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---ceEEEeecCCceEEEEEecCCCCeEEEEe--CC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---GYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng 607 (819)
..|.+||........ +..+...+.+.+|+|||+.|+.++.+ ..|.+||+.+++... +....+...+.+| +|
T Consensus 184 ~~l~i~D~~g~~~~~---lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG 259 (433)
T PRK04922 184 YALQVADSDGYNPQT---ILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDG 259 (433)
T ss_pred EEEEEECCCCCCceE---eecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCC
Confidence 368999987665444 33456789999999999999987743 469999998776533 3334445557788 46
Q ss_pred ceee-eccCCC--eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-CC--eEEEEECCCCceeEEEecCC
Q psy10114 608 DMLS-SGSRDR--MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-DN--RLYVWNLHSMSPLQTYTEHL 681 (819)
Q Consensus 608 ~~La-SGS~DG--tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DG--tI~IWDl~t~~~i~t~~~h~ 681 (819)
+.++ +.+.+| .|.+||+.+++. ..+..+.......+|+|||+.++.++. +| .|+++|+.+++.. .+..+.
T Consensus 260 ~~l~~~~s~~g~~~Iy~~d~~~g~~---~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g 335 (433)
T PRK04922 260 RRLALTLSRDGNPEIYVMDLGSRQL---TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQG 335 (433)
T ss_pred CEEEEEEeCCCCceEEEEECCCCCe---EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCC
Confidence 6554 445555 699999987653 344555555677899999999888775 34 4777787776543 333333
Q ss_pred CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec-CCCeEEEEECCCCc
Q psy10114 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY-SQNQILVWKYPTLT 760 (819)
Q Consensus 682 ~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k 760 (819)
......+|+|+|+.++.+.....+..|.+||+.+++.. .+..+.......|+|||+.++.++.. ..+.+.+++.. +.
T Consensus 336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~ 413 (433)
T PRK04922 336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GR 413 (433)
T ss_pred CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CC
Confidence 44557899999999887754112347999999888755 44344345678999999998875432 23467888874 44
Q ss_pred EEEEEecCCCCEEEEEEec
Q psy10114 761 QVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 761 ~l~sl~gH~~~VtsLafSp 779 (819)
....+..+.+.+...+|+|
T Consensus 414 ~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 414 VRQRLVSADGEVREPAWSP 432 (433)
T ss_pred ceEEcccCCCCCCCCccCC
Confidence 5566666667777788876
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-11 Score=142.66 Aligned_cols=278 Identities=15% Similarity=0.215 Sum_probs=204.0
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEec---cCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC----ceEEEEEec
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDL---SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV----AKQVHKLVG 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l---~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t----gk~i~tl~g 595 (819)
+..+.....+..+.+|+..+.. ...... ..|...+++.++||.++++|+|..||.|.+|.--. ....+.+.=
T Consensus 171 ~ge~~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW 249 (792)
T KOG1963|consen 171 SGEFKGIVHMCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW 249 (792)
T ss_pred CceEEEEEEeeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEe
Confidence 4566777788889999987754 221111 23556689999999999999999999999996322 234566777
Q ss_pred CCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce
Q psy10114 596 HTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP 673 (819)
Q Consensus 596 Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~ 673 (819)
|...|.+++| +|.+|.+|+..|.+.+|.+.+++.+ -+..-.+.|..+.+|||+...+....|+.|.+-...+.+.
T Consensus 250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kq---fLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~ 326 (792)
T KOG1963|consen 250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQ---FLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEI 326 (792)
T ss_pred cccccceeEEecCCceEeecccceEEEEEeecCCCcc---cccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhh
Confidence 9999999999 6889999999999999999998743 3445567899999999999999999999999988766554
Q ss_pred eEEEec-----------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-------C-----CCCeEE
Q psy10114 674 LQTYTE-----------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-------T-----GSQVCN 730 (819)
Q Consensus 674 i~t~~~-----------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-------~-----~s~V~s 730 (819)
..++.+ ..+-.+.++++|.-+.++..| ..+.|.+||+.+.+.+..+. . ...++.
T Consensus 327 k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~---~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~ita 403 (792)
T KOG1963|consen 327 KSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNG---HPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITA 403 (792)
T ss_pred hhhccCccCCCccccccccccceeEEEcCCCCceeecC---CCceEEEEeccccceeeeEEEEeecccCCcceeEEeeee
Confidence 333332 234467788999555555544 78999999999887765542 1 124677
Q ss_pred EEEccCCCEEEEEEec------C--CCeEEEEECCCCcEEEEE-----ecCCCCEEEEEEec-C-CCEEEEEeCCCcEEE
Q psy10114 731 LAWSKHSSELVSTHGY------S--QNQILVWKYPTLTQVAKL-----TGHSYRVLYLAMSP-D-GEAIVTGAGDETLRF 795 (819)
Q Consensus 731 LafSpdg~~LastsGs------s--Dg~I~IWDl~s~k~l~sl-----~gH~~~VtsLafSp-D-G~~LaSGS~DGtIrI 795 (819)
++.+..|..+++.-.. . ...+++|-.....+-..+ ..|...+...++.+ . ....++++.||.+++
T Consensus 404 v~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~Ki 483 (792)
T KOG1963|consen 404 VARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKI 483 (792)
T ss_pred ehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEE
Confidence 8888889988885421 2 346889987655443333 36776666665544 2 337899999999999
Q ss_pred EECCCCceeccc
Q psy10114 796 WNVFSKVRSQRE 807 (819)
Q Consensus 796 Wdl~s~~~~~k~ 807 (819)
|-+.+.+...++
T Consensus 484 W~~~~~~n~~k~ 495 (792)
T KOG1963|consen 484 WVFTDDSNIYKK 495 (792)
T ss_pred EEEecccccCcC
Confidence 999665554443
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=7e-12 Score=128.50 Aligned_cols=156 Identities=18% Similarity=0.409 Sum_probs=116.2
Q ss_pred EEEEECCCCCEEEEEEC---C-------CeEEEEECCC-CceeEEEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 643 CGLKWSPDNQYLASGGN---D-------NRLYVWNLHS-MSPLQTYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~---D-------GtI~IWDl~t-~~~i~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
..+.|+++|+.|+.-.. | +...+|.++. +.+...+.- ..++|.+++|+|+|+.++++.| ..++.|.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g-~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYG-SMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEc-cCCcccEE
Confidence 56889999988765443 1 2344555422 234444432 3457999999999998876653 46789999
Q ss_pred EECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE-ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 711 WNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 711 WDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts-GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
||++ ++.+..+. ...+..+.|+|+|+++++++ |...|.|.+||.++.+.+.+.. | ..++.++|||||+++++++.
T Consensus 88 yd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 88 YDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATATT 163 (194)
T ss_pred EcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEEe
Confidence 9997 66677665 45678999999999999863 2345789999999998887765 3 34789999999999999874
Q ss_pred ------CCcEEEEECCCCce
Q psy10114 790 ------DETLRFWNVFSKVR 803 (819)
Q Consensus 790 ------DGtIrIWdl~s~~~ 803 (819)
|..++||++..+..
T Consensus 164 ~~r~~~dng~~Iw~~~G~~l 183 (194)
T PF08662_consen 164 SPRLRVDNGFKIWSFQGRLL 183 (194)
T ss_pred ccceeccccEEEEEecCeEe
Confidence 78999999865443
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=142.70 Aligned_cols=194 Identities=20% Similarity=0.239 Sum_probs=152.4
Q ss_pred EEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe
Q psy10114 601 GALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 601 ~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~ 678 (819)
.+++| +|..+++|+.||.+++|+..+.. .+.....|..+|.++.|+|||+.|++-+.| ..+|||.+++.++....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~--t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML--TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch--hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 45666 67799999999999999976644 346677899999999999999999999999 99999999997776655
Q ss_pred c--CCCCEEEEEEcCCC---CeEEEEEccCCCCeEEEEECCCCce------eEEEcCCCCeEEEEEccCCCEEEEEEecC
Q psy10114 679 E--HLAAVKAIAWSPHH---HGLLASGGGTADRCIRFWNTLTGQP------MQCVDTGSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 679 ~--h~~~VtsLafSPdg---~~LLaSGgGs~DgtIrIWDl~tg~~------v~~l~~~s~V~sLafSpdg~~LastsGss 747 (819)
. .......+.|+.++ ...+++. -..-+.|+.||+..... .+.+.....|++++.+.+|++++. |+.
T Consensus 225 ~~~k~~~~~~cRF~~d~~~~~l~laa~-~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~Al--GT~ 301 (398)
T KOG0771|consen 225 PFSKDEMFSSCRFSVDNAQETLRLAAS-QFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLAL--GTM 301 (398)
T ss_pred CcccchhhhhceecccCCCceEEEEEe-cCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEE--ecc
Confidence 2 23445667777665 3233332 12456677766543221 122233567999999999999999 889
Q ss_pred CCeEEEEECCCCcEEEEE-ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 748 QNQILVWKYPTLTQVAKL-TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl-~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
||.|.+++..+.+.+.-. +.|...|+.+.|+||.+++++.+.|....+..+.-
T Consensus 302 dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 302 DGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 999999999998887665 47999999999999999999999999999988865
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.6e-11 Score=126.90 Aligned_cols=242 Identities=14% Similarity=0.188 Sum_probs=170.0
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCC--CCeEEEEeCCceee-eccCC------CeEEEEECCC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT--ARVGALAWNGDMLS-SGSRD------RMILQRDVRT 626 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs--~~V~sLawng~~La-SGS~D------GtI~IWDi~t 626 (819)
....+++|+.|...+++|.++| .+||+.+--+....-+-+. -.+..+-|-.++|+ +||.+ ..+.|||-..
T Consensus 6 ~~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k 84 (346)
T KOG2111|consen 6 PKTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLK 84 (346)
T ss_pred CceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEeccc
Confidence 3456699999999999999988 8999987644332222222 23334445555444 44443 4799999433
Q ss_pred CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC-CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH-SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~-t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.. .+..+ .-..+|.++.++++ .+++.- ++.|+||... +.+.+..+.....+=--.+.+|....-+.+.-|..-
T Consensus 85 ~~--~i~el-~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~ 158 (346)
T KOG2111|consen 85 ER--CIIEL-SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKT 158 (346)
T ss_pred Cc--EEEEE-EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCcc
Confidence 22 23333 34678999999865 455443 5799999987 556666665332221233344443333333335678
Q ss_pred CeEEEEECCCCce---eEEEcCCCCeEEEEEccCCCEEEEEEecCCCe-EEEEECCCCcEEEEEecC--CCCEEEEEEec
Q psy10114 706 RCIRFWNTLTGQP---MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQ-ILVWKYPTLTQVAKLTGH--SYRVLYLAMSP 779 (819)
Q Consensus 706 gtIrIWDl~tg~~---v~~l~~~s~V~sLafSpdg~~LastsGssDg~-I~IWDl~s~k~l~sl~gH--~~~VtsLafSp 779 (819)
|.|++-|+...+. .....|.+.|.+++.+.+|..+++ ++..|+ |+|||..+|+++.+++.. ...|.+++|||
T Consensus 159 GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vAT--aStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 159 GQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVAT--ASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred ceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEE--eccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence 9999999987665 455578999999999999999999 566665 899999999999999743 35699999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
|+.+|+++|+.|+|.++.+.......+
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~~~~~~~ 263 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRDTENTED 263 (346)
T ss_pred CccEEEEEcCCCeEEEEEeecCCCCcc
Confidence 999999999999999999987665444
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.9e-11 Score=139.62 Aligned_cols=217 Identities=19% Similarity=0.209 Sum_probs=151.5
Q ss_pred ceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC---CCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 577 GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR---DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~---DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
..|.+||.. +...+.+..+...+.+.+| +|+.|+.++. +..|.+||+.+++.. .+....+...+.+|+|||
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~---~l~~~~g~~~~~~~SpDG 259 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE---LVASFRGINGAPSFSPDG 259 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE---EeccCCCCccCceECCCC
Confidence 468899975 4445566677788999999 5777776653 347999999876542 333344455678999999
Q ss_pred CEEEE-EECCC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC--eEEEEECCCCceeEEEcCCC
Q psy10114 652 QYLAS-GGNDN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR--CIRFWNTLTGQPMQCVDTGS 726 (819)
Q Consensus 652 ~~LaS-GS~DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl~tg~~v~~l~~~s 726 (819)
+.++. .+.+| .|++||+.+++. ..+..+.......+|+|+|+.++.++. .++ .|.++|+.+++.......+.
T Consensus 260 ~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd--~~g~~~iy~~dl~~g~~~~lt~~g~ 336 (433)
T PRK04922 260 RRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSD--RGGRPQIYRVAASGGSAERLTFQGN 336 (433)
T ss_pred CEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEEC--CCCCceEEEEECCCCCeEEeecCCC
Confidence 98764 45555 599999988764 445555555678899999998887754 333 47777887776544333344
Q ss_pred CeEEEEEccCCCEEEEEEecC-CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC---CcEEEEECCCCc
Q psy10114 727 QVCNLAWSKHSSELVSTHGYS-QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD---ETLRFWNVFSKV 802 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGss-Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D---GtIrIWdl~s~~ 802 (819)
.....+|+|+|+.++.+++.. ...|.+||..+++.. .+. +.......+|+|||++|+..+.+ +.|.++++..+.
T Consensus 337 ~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~ 414 (433)
T PRK04922 337 YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRV 414 (433)
T ss_pred CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence 556789999999998864321 236999999877654 343 22345567999999988876653 467888886543
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-11 Score=147.56 Aligned_cols=260 Identities=17% Similarity=0.238 Sum_probs=181.2
Q ss_pred EEcCCCceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCc-------eEEEEEecCCCCeEEEEe--CC
Q psy10114 538 WSACTSQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVA-------KQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 538 Wd~~tg~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tg-------k~i~tl~gHs~~V~sLaw--ng 607 (819)
|+...- .+..+..|...|..++.++.. .++++|+.||+|++||..+- +...++.....++.++.. ++
T Consensus 1034 W~p~G~---lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1034 WNPRGI---LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG 1110 (1431)
T ss_pred CCccce---EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC
Confidence 555432 344667788888898887755 99999999999999998532 233344434566777666 78
Q ss_pred ceeeeccCCCeEEEEECCCCCccc-----eEEEeccc-CC-eEEEEECC-CCC-EEEEEECCCeEEEEECCCCceeEEEe
Q psy10114 608 DMLSSGSRDRMILQRDVRTPNSQS-----ERRLVGHR-QE-VCGLKWSP-DNQ-YLASGGNDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 608 ~~LaSGS~DGtI~IWDi~t~~~~~-----v~~l~gH~-~~-VtsLafSp-dg~-~LaSGS~DGtI~IWDl~t~~~i~t~~ 678 (819)
+.+|.|+.||.|.+.+++...... ......+. +. |..-++.. ++. .++.+..-+.|..||++......+++
T Consensus 1111 ~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk 1190 (1431)
T KOG1240|consen 1111 DQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK 1190 (1431)
T ss_pred CeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh
Confidence 999999999999999987632111 11111121 22 33333433 233 67888888999999999877665554
Q ss_pred --cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC--CCeEEEEEccCC---CEEEEEEec-CCCe
Q psy10114 679 --EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHS---SELVSTHGY-SQNQ 750 (819)
Q Consensus 679 --~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg---~~LastsGs-sDg~ 750 (819)
...+.|++++.+|.+..++ .| +..|.+.+||++-+.++....++ .++..+..+|-. ...+++ |. ..+.
T Consensus 1191 ~~~~hG~vTSi~idp~~~Wlv-iG--ts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~-~~~~~ne 1266 (1431)
T KOG1240|consen 1191 NQLRHGLVTSIVIDPWCNWLV-IG--TSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSA-GSSSNNE 1266 (1431)
T ss_pred cCccccceeEEEecCCceEEE-Ee--cCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEe-cccCCCc
Confidence 3468899999999999554 44 58999999999999998887654 557777666643 344544 44 7889
Q ss_pred EEEEECCCCcEEEEEecCC-------------------CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 751 ILVWKYPTLTQVAKLTGHS-------------------YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 751 I~IWDl~s~k~l~sl~gH~-------------------~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
|.+|++.+|.....+...+ -.....++...+..+.+|+.|..||.||....+..
T Consensus 1267 vs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1267 VSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred eeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccc
Confidence 9999999887665554321 11222334445668999999999999999877665
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-11 Score=136.65 Aligned_cols=220 Identities=16% Similarity=0.144 Sum_probs=155.9
Q ss_pred ceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeecc---CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 577 GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGS---RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS---~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
..|.++|.+ +...+.+..|...+.+.+| +|+.|+..+ .+..|.+||+.+++. ..+..+.+.+.+.+|+|||
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~---~~l~~~~g~~~~~~~SPDG 257 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR---ELVGNFPGMTFAPRFSPDG 257 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE---EEeecCCCcccCcEECCCC
Confidence 378888874 5555667788889999999 567777654 356899999988653 3445566677889999999
Q ss_pred CEEE-EEECCCe--EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCe
Q psy10114 652 QYLA-SGGNDNR--LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQV 728 (819)
Q Consensus 652 ~~La-SGS~DGt--I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V 728 (819)
+.++ +.+.++. |++||+.+++. ..+..+.+.....+|+|+|+.++.++....+..|.++|+.+++..........+
T Consensus 258 ~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~ 336 (435)
T PRK05137 258 RKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRY 336 (435)
T ss_pred CEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcc
Confidence 9876 4455554 88889887764 456666666778999999998887764222357889998877655444445567
Q ss_pred EEEEEccCCCEEEEEEec-CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC------CcEEEEECCCC
Q psy10114 729 CNLAWSKHSSELVSTHGY-SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD------ETLRFWNVFSK 801 (819)
Q Consensus 729 ~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D------GtIrIWdl~s~ 801 (819)
....|+|+|+.++.+... .+..|.+||..++.. ..+. ....+...+|+|||+.|+..+.+ ..+.+.|+.++
T Consensus 337 ~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~ 414 (435)
T PRK05137 337 STPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR 414 (435)
T ss_pred cCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC
Confidence 778999999999886432 224788889765443 3333 23356788999999998765543 25778888765
Q ss_pred ce
Q psy10114 802 VR 803 (819)
Q Consensus 802 ~~ 803 (819)
..
T Consensus 415 ~~ 416 (435)
T PRK05137 415 NE 416 (435)
T ss_pred ce
Confidence 44
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-10 Score=130.62 Aligned_cols=275 Identities=15% Similarity=0.161 Sum_probs=180.0
Q ss_pred EEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-
Q psy10114 527 LSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW- 605 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw- 605 (819)
++-..++.|.+.|..+.+.... +......-..+.+++||+++++++.||.|.++|+.+++.+++++.... ..++++
T Consensus 10 V~~~~~~~v~viD~~t~~~~~~--i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s 86 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATNKVVAR--IPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIAVS 86 (369)
T ss_dssp EEEGGGTEEEEEETTT-SEEEE--EE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEEE-
T ss_pred EEecCCCEEEEEECCCCeEEEE--EcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEEEc
Confidence 3445679999999999887664 333333345578999999999999999999999999999999875433 455666
Q ss_pred -CCceeeecc-CCCeEEEEECCCCCccceEEEec-------ccCCeEEEEECCCCCEEEEEEC-CCeEEEEECCCCceeE
Q psy10114 606 -NGDMLSSGS-RDRMILQRDVRTPNSQSERRLVG-------HRQEVCGLKWSPDNQYLASGGN-DNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 606 -ng~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~g-------H~~~VtsLafSpdg~~LaSGS~-DGtI~IWDl~t~~~i~ 675 (819)
+|+++++++ .++.+.++|.++.+.. ..+.. ....+.++..++.+..++..-. .+.|.+.|....+.+.
T Consensus 87 ~DG~~~~v~n~~~~~v~v~D~~tle~v--~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~ 164 (369)
T PF02239_consen 87 PDGKYVYVANYEPGTVSVIDAETLEPV--KTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK 164 (369)
T ss_dssp -TTTEEEEEEEETTEEEEEETTT--EE--EEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE
T ss_pred CCCCEEEEEecCCCceeEeccccccce--eecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc
Confidence 688777665 6899999999886633 33322 2346788888998886665555 4889888987765433
Q ss_pred -EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--------------------------------
Q psy10114 676 -TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-------------------------------- 722 (819)
Q Consensus 676 -t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-------------------------------- 722 (819)
+............|+|++++++++.. .++.|-++|..+++.+..+
T Consensus 165 ~~~i~~g~~~~D~~~dpdgry~~va~~--~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~ 242 (369)
T PF02239_consen 165 VTTIKVGRFPHDGGFDPDGRYFLVAAN--GSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFA 242 (369)
T ss_dssp EEEEE--TTEEEEEE-TTSSEEEEEEG--GGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSE
T ss_pred eeeecccccccccccCcccceeeeccc--ccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeecccccee
Confidence 22234456678999999998888654 5668888887766543322
Q ss_pred -----------------------cCCCCeEEEEEccCCCEEEEEE--ecCCCeEEEEECCCCcEEEEEecC-CCCEEEEE
Q psy10114 723 -----------------------DTGSQVCNLAWSKHSSELVSTH--GYSQNQILVWKYPTLTQVAKLTGH-SYRVLYLA 776 (819)
Q Consensus 723 -----------------------~~~s~V~sLafSpdg~~Lasts--GssDg~I~IWDl~s~k~l~sl~gH-~~~VtsLa 776 (819)
...+.-.-+..+|+++++.+.. +..+++|.++|..+.+.+.++... ..++.++.
T Consensus 243 ~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~e 322 (369)
T PF02239_consen 243 IPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHME 322 (369)
T ss_dssp EEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEE
T ss_pred cccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccE
Confidence 1111123466688999988841 244689999999999888777532 33599999
Q ss_pred EecCCCEEEEEeC--CCcEEEEECCCCceecccc
Q psy10114 777 MSPDGEAIVTGAG--DETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 777 fSpDG~~LaSGS~--DGtIrIWdl~s~~~~~k~~ 808 (819)
|++||+.+..+.. +|.|.++|..+.+...+.+
T Consensus 323 f~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 323 FNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp E-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 9999997765544 3479999999987665543
|
... |
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4e-11 Score=136.90 Aligned_cols=239 Identities=15% Similarity=0.076 Sum_probs=156.7
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---ceEEEeecCCceEEEEEecCCCCeEEEEe--CC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---GYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng 607 (819)
..|.++|........ +..+.+.+.+.+|+|||+.|+.++.+ ..|.+||+.+++... +....+.+.+.+| +|
T Consensus 176 ~~L~~~D~dG~~~~~---l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG 251 (427)
T PRK02889 176 YQLQISDADGQNAQS---ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDG 251 (427)
T ss_pred cEEEEECCCCCCceE---eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC
Confidence 467888875544333 33456789999999999999887643 469999998886543 3334455667888 56
Q ss_pred ceee-eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-CCeEEEE--ECCCCceeEEEecCCCC
Q psy10114 608 DMLS-SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-DNRLYVW--NLHSMSPLQTYTEHLAA 683 (819)
Q Consensus 608 ~~La-SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DGtI~IW--Dl~t~~~i~t~~~h~~~ 683 (819)
+.++ +.+.+|...+|.++.... ....+..+........|+|||+.++..++ +|...+| |..+++. ..+......
T Consensus 252 ~~la~~~~~~g~~~Iy~~d~~~~-~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~ 329 (427)
T PRK02889 252 RTLAVALSRDGNSQIYTVNADGS-GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSY 329 (427)
T ss_pred CEEEEEEccCCCceEEEEECCCC-CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCCCC
Confidence 6665 567788766665543221 13445555555677889999998887665 4555555 4445443 222222333
Q ss_pred EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC--eEEEEECCCCcE
Q psy10114 684 VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN--QILVWKYPTLTQ 761 (819)
Q Consensus 684 VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg--~I~IWDl~s~k~ 761 (819)
....+|+|+|+.++.++....+..|.+||+.+++..... .........|+|||+.++.+.. ..| .+.+.+. +++.
T Consensus 330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt-~~~~~~~p~~spdg~~l~~~~~-~~g~~~l~~~~~-~g~~ 406 (427)
T PRK02889 330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALT-DTTRDESPSFAPNGRYILYATQ-QGGRSVLAAVSS-DGRI 406 (427)
T ss_pred cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEcc-CCCCccCceECCCCCEEEEEEe-cCCCEEEEEEEC-CCCc
Confidence 456789999998887654112237999999988754333 3334567899999999988642 222 3555565 4666
Q ss_pred EEEEecCCCCEEEEEEecC
Q psy10114 762 VAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpD 780 (819)
...+..+.+.+...+|+|-
T Consensus 407 ~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 407 KQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred eEEeecCCCCCCCCccCCC
Confidence 6666667777888888773
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-11 Score=145.44 Aligned_cols=243 Identities=16% Similarity=0.261 Sum_probs=178.3
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecC---CCCeEEEEe-C---CceeeeccCCCeEEEEECCCCC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGH---TARVGALAW-N---GDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gH---s~~V~sLaw-n---g~~LaSGS~DGtI~IWDi~t~~ 628 (819)
..-..+.|+|-...++++...-.|+|||.+.++....+..+ ...|+.+.+ | ...+++|+.||.|++|+--...
T Consensus 1065 ~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~ 1144 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADK 1144 (1387)
T ss_pred CCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccc
Confidence 34567889998999999998889999999999998888754 467889998 3 4489999999999999754332
Q ss_pred ---ccceEEEe-------cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe-cCCCCEEEEEEcCCCCeEE
Q psy10114 629 ---SQSERRLV-------GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 629 ---~~~v~~l~-------gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~-~h~~~VtsLafSPdg~~LL 697 (819)
...+.... +..+.-.-++|..+..+|+++|+-..|+|||......+..+. +....|+++.-+-.+..++
T Consensus 1145 ~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i 1224 (1387)
T KOG1517|consen 1145 WKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNII 1224 (1387)
T ss_pred cCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceE
Confidence 11111111 111222456788777778887778899999998877666654 3456677777665555577
Q ss_pred EEEccCCCCeEEEEECCCCce---eEEE-cCCCC--eEEEEEccCCCE-EEEEEecCCCeEEEEECCCCcEE--EEEecC
Q psy10114 698 ASGGGTADRCIRFWNTLTGQP---MQCV-DTGSQ--VCNLAWSKHSSE-LVSTHGYSQNQILVWKYPTLTQV--AKLTGH 768 (819)
Q Consensus 698 aSGgGs~DgtIrIWDl~tg~~---v~~l-~~~s~--V~sLafSpdg~~-LastsGssDg~I~IWDl~s~k~l--~sl~gH 768 (819)
++|- .||.|++||.+.... +... .+... |..+.+.++|-. +++ |+.+|.|++||++..... .++..|
T Consensus 1225 ~AGf--aDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvS--gs~~G~I~~~DlR~~~~e~~~~iv~~ 1300 (1387)
T KOG1517|consen 1225 AAGF--ADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVS--GSQDGDIQLLDLRMSSKETFLTIVAH 1300 (1387)
T ss_pred EEee--cCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceee--eccCCeEEEEecccCcccccceeeec
Confidence 7765 899999999987543 2222 34444 899999987655 777 889999999999864222 233333
Q ss_pred C--C-CEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 769 S--Y-RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 769 ~--~-~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
- + ..+++..+++...+|+|+. +.|+||++...+.
T Consensus 1301 ~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l 1337 (1387)
T KOG1517|consen 1301 WEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL 1337 (1387)
T ss_pred cccCccceeeeeccCCCeeeecCc-ceEEEEecChhhh
Confidence 2 3 4899999999999999998 9999999976543
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-11 Score=129.28 Aligned_cols=220 Identities=21% Similarity=0.304 Sum_probs=169.2
Q ss_pred EEEEEecC--CeEEEEECCCeEEEEEcCCCc-eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec-CCc--eE
Q psy10114 516 LNLVDWSS--QNVLSVGLGSCVYLWSACTSQ-VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV-SVA--KQ 589 (819)
Q Consensus 516 v~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~-~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl-~tg--k~ 589 (819)
+.+.+|+. +.++.+.....|.|+.....+ .+...+++.|...|++|.|+|.++.|++++.|..-.+|.. ..+ ++
T Consensus 13 itchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkp 92 (361)
T KOG1523|consen 13 ITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKP 92 (361)
T ss_pred eeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecc
Confidence 44556664 456666777799999998887 7778889999999999999999999999999999999998 433 44
Q ss_pred EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc--ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 590 VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ--SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 590 i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~--~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
.-.+..+...++++.| +++.+++||..+.|.+|-.+..+.- ....-+.+...|++++|+|++-+++.|+.|+..+|
T Consensus 93 tlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rV 172 (361)
T KOG1523|consen 93 TLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRV 172 (361)
T ss_pred ceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeE
Confidence 5556678999999999 5789999999999999988775531 12233456788999999999999999999999999
Q ss_pred EECC-----C-------------CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEEc-CC
Q psy10114 666 WNLH-----S-------------MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCVD-TG 725 (819)
Q Consensus 666 WDl~-----t-------------~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l~-~~ 725 (819)
+..- . |+.+.++....+.|..+.|+|+|..+...+ .|.++.+-|..... .+.... ..
T Consensus 173 fSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~---Hds~v~~~da~~p~~~v~~~~~~~ 249 (361)
T KOG1523|consen 173 FSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVG---HDSTVSFVDAAGPSERVQSVATAQ 249 (361)
T ss_pred EEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEec---CCCceEEeecCCCchhccchhhcc
Confidence 8741 1 122344445678899999999999888876 79999999987664 233332 22
Q ss_pred CCeEEEEEccCCC
Q psy10114 726 SQVCNLAWSKHSS 738 (819)
Q Consensus 726 s~V~sLafSpdg~ 738 (819)
-+..++.|-.+..
T Consensus 250 lP~ls~~~ise~~ 262 (361)
T KOG1523|consen 250 LPLLSVSWISENS 262 (361)
T ss_pred CCceeeEeecCCc
Confidence 4455555554433
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-12 Score=142.50 Aligned_cols=251 Identities=22% Similarity=0.364 Sum_probs=197.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe----CCceeeeccCCCeEEEEEC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW----NGDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw----ng~~LaSGS~DGtI~IWDi 624 (819)
.+..|.+.|..|.|+..|..|++|+.|..|.+||..+++....+. ||...|..-.| +...+++++.||.+++=.+
T Consensus 137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i 216 (559)
T KOG1334|consen 137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI 216 (559)
T ss_pred cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence 577899999999999999999999999999999999988777665 89988888777 3448999999999998876
Q ss_pred CCCCc-cceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEEe---cCCC---CEEEEEEcCCCCeE
Q psy10114 625 RTPNS-QSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTYT---EHLA---AVKAIAWSPHHHGL 696 (819)
Q Consensus 625 ~t~~~-~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~~---~h~~---~VtsLafSPdg~~L 696 (819)
..... .....+..|.+.|..++.-|+. ..|.+++.|+.+.-+|++.+.+...+. .+.. ...+++..|...+.
T Consensus 217 ~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~ 296 (559)
T KOG1334|consen 217 LETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNE 296 (559)
T ss_pred ccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccc
Confidence 54332 3356778899999999999865 468999999999999999887654443 2233 56789999999989
Q ss_pred EEEEccCCCCeEEEEECCCCce------eEEE-------cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC--CC--
Q psy10114 697 LASGGGTADRCIRFWNTLTGQP------MQCV-------DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP--TL-- 759 (819)
Q Consensus 697 LaSGgGs~DgtIrIWDl~tg~~------v~~l-------~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~--s~-- 759 (819)
+++|| .|..+++||.+.-.. +..+ +....|++++++.++..+.+ .+.|-.|+++.-. .|
T Consensus 297 faVgG--~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLa--SYnDe~IYLF~~~~~~G~~ 372 (559)
T KOG1334|consen 297 FAVGG--SDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLA--SYNDEDIYLFNKSMGDGSE 372 (559)
T ss_pred cccCC--hhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceee--eecccceEEeccccccCCC
Confidence 99987 899999999875322 1222 22456999999999999888 7889999999532 22
Q ss_pred --------cEEEE-EecCCC--CEEEEEE-ecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 760 --------TQVAK-LTGHSY--RVLYLAM-SPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 760 --------k~l~s-l~gH~~--~VtsLaf-SpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
..+.. ++||.. .|.++-| -|...++++|+.=|.|.||+-.+++..
T Consensus 373 p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii 429 (559)
T KOG1334|consen 373 PDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEII 429 (559)
T ss_pred CCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHH
Confidence 12222 678854 3666654 678899999999999999998887654
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.8e-11 Score=138.61 Aligned_cols=283 Identities=14% Similarity=0.197 Sum_probs=195.1
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCC--CceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACT--SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~t--g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+..++..+..++++..||.|.+|.--. ++......+.=|.+.|++++|+++|.+|.+|+..|.+.+|.+++++ .+-
T Consensus 209 t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqf 287 (792)
T KOG1963|consen 209 TCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQF 287 (792)
T ss_pred eeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-ccc
Confidence 4555666678899999999999997644 2222223344578899999999999999999999999999999988 444
Q ss_pred EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc-ceEEE--------ecccCCeEEEEECCCCCEEEEEECCC
Q psy10114 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ-SERRL--------VGHRQEVCGLKWSPDNQYLASGGNDN 661 (819)
Q Consensus 593 l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~-~v~~l--------~gH~~~VtsLafSpdg~~LaSGS~DG 661 (819)
+..-.+.|..+.+ +++..+....|..|.+-...+.+.+ .+..+ ....+-.+.++++|.-+.++-.+..|
T Consensus 288 LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g 367 (792)
T KOG1963|consen 288 LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPG 367 (792)
T ss_pred ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCc
Confidence 5566788999999 5778888888999988876543211 01111 11234567889999778888899999
Q ss_pred eEEEEECCCCceeEEEec-----------CCCCEEEEEEcCCCCeEEEEEc-----cCCC--CeEEEEECCCCceeE---
Q psy10114 662 RLYVWNLHSMSPLQTYTE-----------HLAAVKAIAWSPHHHGLLASGG-----GTAD--RCIRFWNTLTGQPMQ--- 720 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~-----------h~~~VtsLafSPdg~~LLaSGg-----Gs~D--gtIrIWDl~tg~~v~--- 720 (819)
.|.+||+.+.+.+..+.. +.-.+++++.+-.|..+.+... +..| -.+++|-......-.
T Consensus 368 ~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~ 447 (792)
T KOG1963|consen 368 HVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILN 447 (792)
T ss_pred eEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEE
Confidence 999999988776665531 2335677777777765443321 1122 357888765543322
Q ss_pred -EE--cCCCCeEEEEEcc-CCC-EEEEEEecCCCeEEEEECCCCc----------EEEEEecCCCCEEEEEEecCCCEEE
Q psy10114 721 -CV--DTGSQVCNLAWSK-HSS-ELVSTHGYSQNQILVWKYPTLT----------QVAKLTGHSYRVLYLAMSPDGEAIV 785 (819)
Q Consensus 721 -~l--~~~s~V~sLafSp-dg~-~LastsGssDg~I~IWDl~s~k----------~l~sl~gH~~~VtsLafSpDG~~La 785 (819)
.+ .|+..+...++.+ ... ..++ .+.||.+++|-+.+.+ +...-.-|..++++++|+.||..|
T Consensus 448 T~I~~PH~~~~vat~~~~~~rs~~~vt--a~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGsll- 524 (792)
T KOG1963|consen 448 TKINNPHGNAFVATIFLNPTRSVRCVT--ASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLL- 524 (792)
T ss_pred EEEecCCCceeEEEEEecCcccceeEE--eccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEE-
Confidence 22 3555544444444 333 3444 6789999999883221 111111378889999999999655
Q ss_pred EEeCCCcEEEEECCCC
Q psy10114 786 TGAGDETLRFWNVFSK 801 (819)
Q Consensus 786 SGS~DGtIrIWdl~s~ 801 (819)
+.+.|++|.+||..+.
T Consensus 525 a~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 525 AVSFDDTITIWDYDTK 540 (792)
T ss_pred EEecCCEEEEecCCCh
Confidence 5667889999999884
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-09 Score=118.17 Aligned_cols=270 Identities=15% Similarity=0.196 Sum_probs=182.2
Q ss_pred EEEEECC----CeEEEEEc--CCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec----CceEEEeecCCc--e--EEE
Q psy10114 526 VLSVGLG----SCVYLWSA--CTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH----HGYVQVWDVSVA--K--QVH 591 (819)
Q Consensus 526 LLa~g~D----g~V~LWd~--~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~----DGtI~IWDl~tg--k--~i~ 591 (819)
++.|+.+ +.|++++. .++++..+.... .......+++++++++|.++.. +|.|..|++... + .+.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 3445554 68888887 667766555432 3456778999999999999877 579999988764 2 333
Q ss_pred EEecCCCCeEEEEe--CCceeeecc-CCCeEEEEECCCCCcc-ceEEEe-----------cccCCeEEEEECCCCCEEEE
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGS-RDRMILQRDVRTPNSQ-SERRLV-----------GHRQEVCGLKWSPDNQYLAS 656 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS-~DGtI~IWDi~t~~~~-~v~~l~-----------gH~~~VtsLafSpdg~~LaS 656 (819)
+..........++. ++++|+++. .+|.|.++++...... ...... .......++.++|||+++++
T Consensus 81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v 160 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV 160 (345)
T ss_dssp EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence 44333445556777 566776665 6899999999874321 111111 12245788999999998887
Q ss_pred EEC-CCeEEEEECCCCc--e--eEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC--CCc--eeEEEcC--
Q psy10114 657 GGN-DNRLYVWNLHSMS--P--LQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL--TGQ--PMQCVDT-- 724 (819)
Q Consensus 657 GS~-DGtI~IWDl~t~~--~--i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~--tg~--~v~~l~~-- 724 (819)
... ...|.+|++.... . ...+. .....-..++|+|+++.++++.. .+++|.++++. ++. .++.+..
T Consensus 161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e--~s~~v~v~~~~~~~g~~~~~~~~~~~~ 238 (345)
T PF10282_consen 161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNE--LSNTVSVFDYDPSDGSLTEIQTISTLP 238 (345)
T ss_dssp EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESCE
T ss_pred EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecC--CCCcEEEEeecccCCceeEEEEeeecc
Confidence 654 3479999997654 2 12222 34456789999999999988875 88999999988 443 2223321
Q ss_pred -----CCCeEEEEEccCCCEEEEEEecCCCeEEEEECC--CC--cEEEEEecCCCCEEEEEEecCCCEEEEEe-CCCcEE
Q psy10114 725 -----GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP--TL--TQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLR 794 (819)
Q Consensus 725 -----~s~V~sLafSpdg~~LastsGssDg~I~IWDl~--s~--k~l~sl~gH~~~VtsLafSpDG~~LaSGS-~DGtIr 794 (819)
......++++|||++++++ ....+.|.+|++. ++ +.+..+.........++++|+|++|+++. .++.|.
T Consensus 239 ~~~~~~~~~~~i~ispdg~~lyvs-nr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~ 317 (345)
T PF10282_consen 239 EGFTGENAPAEIAISPDGRFLYVS-NRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVS 317 (345)
T ss_dssp TTSCSSSSEEEEEE-TTSSEEEEE-ECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEE
T ss_pred ccccccCCceeEEEecCCCEEEEE-eccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEE
Confidence 1257889999999999986 4457899999993 23 33444444445589999999999999877 567899
Q ss_pred EEECC
Q psy10114 795 FWNVF 799 (819)
Q Consensus 795 IWdl~ 799 (819)
+|+++
T Consensus 318 vf~~d 322 (345)
T PF10282_consen 318 VFDID 322 (345)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.3e-11 Score=129.63 Aligned_cols=236 Identities=20% Similarity=0.314 Sum_probs=165.8
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCc--
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNS-- 629 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~-- 629 (819)
-.+..++|++.-..+|++..|-.|++||-.. ++...++ .....|+|++| ++..|+.|+..| |.+|.......
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence 4577899999777889999999999999776 5444554 34567999999 466888888765 67887653211
Q ss_pred ----------cceEEEecccCCeEEEEECCCCCEEEEEEC-CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 630 ----------QSERRLVGHRQEVCGLKWSPDNQYLASGGN-DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 630 ----------~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
..+....+| ..|+++.|++||..+++++- |..|.|||..++..+.-.....+.+.-+.||||+..+++
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfa 255 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFA 255 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEE
Confidence 112233445 67999999999999999876 567999999998766555456778899999999999998
Q ss_pred EEccCCCCeEEEEECCC-CceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC------Cc---------EE
Q psy10114 699 SGGGTADRCIRFWNTLT-GQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT------LT---------QV 762 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~t-g~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s------~k---------~l 762 (819)
+. -|+..++|+... -....-.-..+.|...+|+|+|++++.+.. +.-++|.+.. +. .+
T Consensus 256 At---~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s---gsp~lysl~f~~~~~~~~~~~~~k~~lli 329 (445)
T KOG2139|consen 256 AT---CDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS---GSPRLYSLTFDGEDSVFLRPQSIKRVLLI 329 (445)
T ss_pred ec---ccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc---CCceEEEEeecCCCccccCcccceeeeee
Confidence 75 699999996543 333333334458999999999999887542 3333443310 00 01
Q ss_pred EEEe------c---CCCCEEEEEEecCCCEEEEEeCCC--------cEEEEECCC
Q psy10114 763 AKLT------G---HSYRVLYLAMSPDGEAIVTGAGDE--------TLRFWNVFS 800 (819)
Q Consensus 763 ~sl~------g---H~~~VtsLafSpDG~~LaSGS~DG--------tIrIWdl~s 800 (819)
..+. + -.+.+.+++|.|.|.+||+.-..+ .|..||...
T Consensus 330 aDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 330 ADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRK 384 (445)
T ss_pred ccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccc
Confidence 1111 1 145788999999999999865433 355566543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=128.56 Aligned_cols=248 Identities=20% Similarity=0.279 Sum_probs=180.0
Q ss_pred cCCCceeecCCCcCCcceEEEEEec-CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC
Q psy10114 498 SRIPFKVLDAPELQDDFYLNLVDWS-SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576 (819)
Q Consensus 498 ~~~P~kvLdap~l~dDfyv~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D 576 (819)
+..|+-+|. | +.-.++++-+. .++++++...|.|++|++.+.......++ .+...|+.+.-.|+ ..+.+-+.|
T Consensus 3 pPdP~fvLR-p---~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~-~g~~~it~lq~~p~-d~l~tqgRd 76 (323)
T KOG0322|consen 3 PPDPFFVLR-P---HSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRL-FGRLFITNLQSIPN-DSLDTQGRD 76 (323)
T ss_pred CCCCeeEec-c---ccchheehhhccchhhhcccccceEEEEEeecCccchhhhh-hccceeeceeecCC-cchhhcCCC
Confidence 345666665 2 22335555555 35799999999999999998765543332 35678999988887 567788899
Q ss_pred ceEEEeecCCceEEE-------------------------EE----------------------------ecCCCCeEEE
Q psy10114 577 GYVQVWDVSVAKQVH-------------------------KL----------------------------VGHTARVGAL 603 (819)
Q Consensus 577 GtI~IWDl~tgk~i~-------------------------tl----------------------------~gHs~~V~sL 603 (819)
+.+.+|++.-+..+. .. .+..+.+.|.
T Consensus 77 ~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~ 156 (323)
T KOG0322|consen 77 PLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQ 156 (323)
T ss_pred ceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeee
Confidence 999999886422110 00 0123445566
Q ss_pred EeC---Cc--eeeeccCCCeEEEEECCCCCc--------cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 604 AWN---GD--MLSSGSRDRMILQRDVRTPNS--------QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 604 awn---g~--~LaSGS~DGtI~IWDi~t~~~--------~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
.++ +. .+++|-++|.+.+||+.++.. ........|.++|.++.+.+....=++|+.+..+..|++..
T Consensus 157 ~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~ 236 (323)
T KOG0322|consen 157 DKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNH 236 (323)
T ss_pred eccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecc
Confidence 652 22 678889999999999998631 12234456899999999988766678888888999998864
Q ss_pred C--ce--eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEe
Q psy10114 671 M--SP--LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 671 ~--~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsG 745 (819)
. .. -....-..-.|..+..-||++ +++++| .|+.||+|+-++.+++..+. |...|.+++|+|+...+++ +
T Consensus 237 s~gslq~~~e~~lknpGv~gvrIRpD~K-IlATAG--WD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAa--a 311 (323)
T KOG0322|consen 237 STGSLQIRKEITLKNPGVSGVRIRPDGK-ILATAG--WDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAA--A 311 (323)
T ss_pred ccCcccccceEEecCCCccceEEccCCc-EEeecc--cCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhh--c
Confidence 3 21 122223345678899999998 566665 99999999999999988774 6688999999999998888 8
Q ss_pred cCCCeEEEEEC
Q psy10114 746 YSQNQILVWKY 756 (819)
Q Consensus 746 ssDg~I~IWDl 756 (819)
+.|++|.+|++
T Consensus 312 skD~rISLWkL 322 (323)
T KOG0322|consen 312 SKDARISLWKL 322 (323)
T ss_pred cCCceEEeeec
Confidence 89999999986
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-11 Score=136.83 Aligned_cols=253 Identities=17% Similarity=0.258 Sum_probs=176.3
Q ss_pred EEECCCeEEEEEcCCCce--EEE--EeccCCCCCeEEEEE-----cCCCCEEEEEecCceEEEeecCCceEEEEEe----
Q psy10114 528 SVGLGSCVYLWSACTSQV--TRL--CDLSADGNSVTSVAW-----NERGNLVAVGTHHGYVQVWDVSVAKQVHKLV---- 594 (819)
Q Consensus 528 a~g~Dg~V~LWd~~tg~~--~~l--~~l~~h~~~VtsLaf-----SpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~---- 594 (819)
.-..+..+++|+...+.. ..+ ..+. ....+|=+| .++|--+.+|-..|.|++.|....+..+.+.
T Consensus 139 cFnvg~~lyv~~~~g~~~~~~pi~k~~y~--gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~ 216 (636)
T KOG2394|consen 139 CFNVGRELYVYSYRGAADLSKPIDKREYK--GTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERL 216 (636)
T ss_pred EEecCCeEEEEEccCcchhccchhhhccc--CCCCceecccccccCCCCcceEEeeccCceEEecchhhHHHHhhhhccc
Confidence 344556788888764321 111 1122 122334444 3467778899999999999976532222111
Q ss_pred cCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEE--ECCCCCEEEEEECCCeEEEEECC
Q psy10114 595 GHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLK--WSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 595 gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLa--fSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
-.+..|+|+.| +...++++-.+|.+.++|..... ..+... ..+++..++....-+. .
T Consensus 217 i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~------------~~t~p~~~~~k~~~~f~i~t~ksk------~ 278 (636)
T KOG2394|consen 217 INKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC------------GATAPSYQALKDGDQFAILTSKSK------K 278 (636)
T ss_pred ccccceEEEEEEeCCCceEEEEEecCceEEeeccccc------------cCCCCcccccCCCCeeEEeeeecc------c
Confidence 23578999999 56688888899999999873211 111111 2235555554432211 2
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCC
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssD 748 (819)
+..++..+.-..+.|...+|+|||+++++++ .||.+||+|..+.+.+...+. -+...|++|||||+++++ |++|
T Consensus 279 ~rNPv~~w~~~~g~in~f~FS~DG~~LA~VS---qDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvt--GGED 353 (636)
T KOG2394|consen 279 TRNPVARWHIGEGSINEFAFSPDGKYLATVS---QDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVT--GGED 353 (636)
T ss_pred cCCccceeEeccccccceeEcCCCceEEEEe---cCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEe--cCCc
Confidence 2356666665677999999999999887775 899999999988776554432 467899999999999999 9999
Q ss_pred CeEEEEECCCCcEEEEEecCCCCEEEEEEec-------------------------------C----C------------
Q psy10114 749 NQILVWKYPTLTQVAKLTGHSYRVLYLAMSP-------------------------------D----G------------ 781 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl~gH~~~VtsLafSp-------------------------------D----G------------ 781 (819)
.-|.||.+...+.++.-++|...|..++|.| + +
T Consensus 354 DLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v 433 (636)
T KOG2394|consen 354 DLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSV 433 (636)
T ss_pred ceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccce
Confidence 9999999999999999999999999999982 0 1
Q ss_pred -CEEEEEeCCCcEEEEECCCCceec
Q psy10114 782 -EAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 782 -~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
-.+.+.+.|-.+++||+.......
T Consensus 434 ~YRfGSVGqDTqlcLWDlteD~L~~ 458 (636)
T KOG2394|consen 434 TYRFGSVGQDTQLCLWDLTEDVLVP 458 (636)
T ss_pred EEEeecccccceEEEEecchhhccc
Confidence 146677889999999998765444
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.8e-10 Score=129.06 Aligned_cols=217 Identities=17% Similarity=0.163 Sum_probs=148.9
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeecc---CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGS---RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS---~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
.|.++|.+... .+.+..+...+.+.+| +|+.|+..+ .+..|.++|+.+++...+..+ .+.+...+|+|||+
T Consensus 180 ~l~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~---~~~~~~~~~SPDG~ 255 (429)
T PRK03629 180 ELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF---PRHNGAPAFSPDGS 255 (429)
T ss_pred eEEEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCC---CCCcCCeEECCCCC
Confidence 68888876543 3445556778889999 566776543 346799999987664332223 33345689999999
Q ss_pred EEEEE-ECCC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC--eEEEEECCCCceeEEEcCCCC
Q psy10114 653 YLASG-GNDN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR--CIRFWNTLTGQPMQCVDTGSQ 727 (819)
Q Consensus 653 ~LaSG-S~DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl~tg~~v~~l~~~s~ 727 (819)
.|+.. +.+| .|++||+++++.. .+..+...+...+|+|+|+.++.++. .++ .|..+|+.+++.......+..
T Consensus 256 ~La~~~~~~g~~~I~~~d~~tg~~~-~lt~~~~~~~~~~wSPDG~~I~f~s~--~~g~~~Iy~~d~~~g~~~~lt~~~~~ 332 (429)
T PRK03629 256 KLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAYTSD--QAGRPQVYKVNINGGAPQRITWEGSQ 332 (429)
T ss_pred EEEEEEcCCCCcEEEEEECCCCCEE-EccCCCCCcCceEECCCCCEEEEEeC--CCCCceEEEEECCCCCeEEeecCCCC
Confidence 88865 4444 5999999887654 44445567788999999998887764 333 455667777765443334445
Q ss_pred eEEEEEccCCCEEEEEEec-CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCc---EEEEECCCCce
Q psy10114 728 VCNLAWSKHSSELVSTHGY-SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDET---LRFWNVFSKVR 803 (819)
Q Consensus 728 V~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGt---IrIWdl~s~~~ 803 (819)
.....|+|||+.++.++.. ....|.+||+.+++.. .+... .......|+|||+.|+.++.|+. +.++++..+..
T Consensus 333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~ 410 (429)
T PRK03629 333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFK 410 (429)
T ss_pred ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCe
Confidence 6678999999999886432 2346888999877643 34322 23456789999999999888764 67788865443
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.1e-12 Score=141.06 Aligned_cols=212 Identities=23% Similarity=0.324 Sum_probs=159.6
Q ss_pred EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC--CCCEEEEEECCCeEE
Q psy10114 589 QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP--DNQYLASGGNDNRLY 664 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp--dg~~LaSGS~DGtI~ 664 (819)
+.+.+.||++.|.|++| +|..|++||.|-.+.|||.-..+ .....-.+|...|.+++|-| +++.+++|..|..|+
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~K-llhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYK-LLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcc-eeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 34568899999999999 68899999999999999998544 23344578999999999998 567899999999999
Q ss_pred EEECCCC----------ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE-EE----------c
Q psy10114 665 VWNLHSM----------SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ-CV----------D 723 (819)
Q Consensus 665 IWDl~t~----------~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~-~l----------~ 723 (819)
++|+... +....+..|...|+.++-.|++...+-+++ .||+|+-+|++....-. .. .
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Phtfwsas--EDGtirQyDiREph~c~p~~~~~~~l~ny~~ 198 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSAS--EDGTIRQYDIREPHVCNPDEDCPSILVNYNP 198 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEec--CCcceeeecccCCccCCccccccHHHHHhch
Confidence 9999742 344556678999999999999988888876 99999999998632110 00 1
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC--------Cc----------EEEEEe-cCC-----------CCEE
Q psy10114 724 TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT--------LT----------QVAKLT-GHS-----------YRVL 773 (819)
Q Consensus 724 ~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s--------~k----------~l~sl~-gH~-----------~~Vt 773 (819)
.--...++..+|...+.+++ |++|--.++||.+. ++ .+..+. +|. ..++
T Consensus 199 ~lielk~ltisp~rp~~laV-GgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t 277 (758)
T KOG1310|consen 199 QLIELKCLTISPSRPYYLAV-GGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCT 277 (758)
T ss_pred hhheeeeeeecCCCCceEEe-cCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeE
Confidence 11345788999988776665 77889999999421 11 122111 221 1257
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 774 YLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
.++|+|+|.-|+..-+...|+++|+..++..
T Consensus 278 ~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 278 YVTFNPNGTELLVSWGGEHVYLFDVNEDKSP 308 (758)
T ss_pred EEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence 7899999987777666679999999877643
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.1e-11 Score=121.12 Aligned_cols=143 Identities=14% Similarity=0.294 Sum_probs=107.2
Q ss_pred CeEEEEECCCCCccceEEEec-ccCCeEEEEECCCCCEEEEE--ECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCC
Q psy10114 617 RMILQRDVRTPNSQSERRLVG-HRQEVCGLKWSPDNQYLASG--GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHH 693 (819)
Q Consensus 617 GtI~IWDi~t~~~~~v~~l~g-H~~~VtsLafSpdg~~LaSG--S~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg 693 (819)
|...+|.++..+.. ...+.- ..+.|.+++|+|+|+.+|+. ..++.|.+||++ ++.+..+. ...+..+.|+|+|
T Consensus 37 ~~~~l~~~~~~~~~-~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G 112 (194)
T PF08662_consen 37 GEFELFYLNEKNIP-VESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDG 112 (194)
T ss_pred eeEEEEEEecCCCc-cceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCC
Confidence 34555555443322 233322 34569999999999987655 356799999996 66666664 5677899999999
Q ss_pred CeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec----CCCeEEEEECCCCcEEEEE
Q psy10114 694 HGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY----SQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 694 ~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs----sDg~I~IWDl~s~k~l~sl 765 (819)
+.++++|-|...|.+.+||.++.+.+...++.. +..++|+|+|+++++++.. .|+.++||++ +|+.+.+.
T Consensus 113 ~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~ 186 (194)
T PF08662_consen 113 RFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKK 186 (194)
T ss_pred CEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEec
Confidence 988888766677899999999988888876654 7899999999999997533 4888999998 46666543
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.7e-11 Score=128.96 Aligned_cols=244 Identities=11% Similarity=0.175 Sum_probs=183.9
Q ss_pred CCCCeEEEEEcCCCC--EEEEEecCceEEEeecCCceEEEE------EecCCCCeEEEEeCCceeeeccCCCeEEEEECC
Q psy10114 554 DGNSVTSVAWNERGN--LVAVGTHHGYVQVWDVSVAKQVHK------LVGHTARVGALAWNGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 554 h~~~VtsLafSpdG~--~LAsGs~DGtI~IWDl~tgk~i~t------l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~ 625 (819)
....|++++|..+++ .+...+.|-.+...+.+....... .....+.|..++-....|++|-.+|.+.+|...
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k 133 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDK 133 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEEEecc
Confidence 346788888876653 444444666777777766554433 345567777888877789999999999999998
Q ss_pred CCC--ccceEEEecccCCeEEEEECCCC-CEEEEEECC--CeEEEEECCCCceeEEEecC---------CCCEEEEEEcC
Q psy10114 626 TPN--SQSERRLVGHRQEVCGLKWSPDN-QYLASGGND--NRLYVWNLHSMSPLQTYTEH---------LAAVKAIAWSP 691 (819)
Q Consensus 626 t~~--~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~D--GtI~IWDl~t~~~i~t~~~h---------~~~VtsLafSP 691 (819)
.+. ......+..+ ..+..+.-++.. ..+|+||.. +.+.+||++..+++.+-+.- .-.++++.|-+
T Consensus 134 ~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~ 212 (412)
T KOG3881|consen 134 SGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLE 212 (412)
T ss_pred CCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecC
Confidence 654 2223333333 456666666644 456679998 88999999988655544322 23467788877
Q ss_pred C--CCeEEEEEccCCCCeEEEEECCCC-ceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEE-Ee
Q psy10114 692 H--HHGLLASGGGTADRCIRFWNTLTG-QPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAK-LT 766 (819)
Q Consensus 692 d--g~~LLaSGgGs~DgtIrIWDl~tg-~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~s-l~ 766 (819)
. .. -++++. .-+.+|+||.+.+ +++.+++. ...++++...|.|+.+++ |...+++..||.+.++.... +.
T Consensus 213 g~~~~-~fat~T--~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~--gn~~g~l~~FD~r~~kl~g~~~k 287 (412)
T KOG3881|consen 213 GSPNY-KFATIT--RYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYT--GNTKGQLAKFDLRGGKLLGCGLK 287 (412)
T ss_pred CCCCc-eEEEEe--cceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEE--ecccchhheecccCceeeccccC
Confidence 6 44 444443 6899999999976 46777754 578999999999999999 88999999999999998877 88
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 767 GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 767 gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+-.+.|+++..+|.++++++++-|..|||+|+.+.+.
T Consensus 288 g~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkl 324 (412)
T KOG3881|consen 288 GITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKL 324 (412)
T ss_pred CccCCcceEEEcCCCceEEeeccceeEEEeecccchh
Confidence 9999999999999999999999999999999998544
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.8e-10 Score=125.72 Aligned_cols=235 Identities=15% Similarity=0.108 Sum_probs=153.5
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---ceEEEeecCCceEEEEEecCCCCeEEEEe--CC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---GYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng 607 (819)
..|.++|...++...+. .+...+.+.+|+|||+.|+.++.+ ..|.+||+.+++... +..+.+.+.+++| ++
T Consensus 170 ~~l~~~d~~g~~~~~l~---~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg 245 (417)
T TIGR02800 170 YELQVADYDGANPQTIT---RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDG 245 (417)
T ss_pred ceEEEEcCCCCCCEEee---cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC
Confidence 46888888665554432 345678899999999999987654 479999998876543 3345556667888 56
Q ss_pred ceee-eccCCC--eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC---eEEEEECCCCceeEEEecCC
Q psy10114 608 DMLS-SGSRDR--MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN---RLYVWNLHSMSPLQTYTEHL 681 (819)
Q Consensus 608 ~~La-SGS~DG--tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG---tI~IWDl~t~~~i~t~~~h~ 681 (819)
+.|+ +.+.++ .|.+||+.++.. ..+..+........|+|||+.|+.++..+ .|+++|+.+++. ..+..+.
T Consensus 246 ~~l~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~ 321 (417)
T TIGR02800 246 SKLAVSLSKDGNPDIYVMDLDGKQL---TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRG 321 (417)
T ss_pred CEEEEEECCCCCccEEEEECCCCCE---EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCC
Confidence 5554 445444 588889887542 33444444455778999999988766532 688889877664 3444455
Q ss_pred CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCC-CeEEEEECCCCc
Q psy10114 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQ-NQILVWKYPTLT 760 (819)
Q Consensus 682 ~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssD-g~I~IWDl~s~k 760 (819)
..+...+|+|+|+.++.+..+.....|.+||+.++... .+..........|+|+|+.++....... ..+.+.+. +++
T Consensus 322 ~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~ 399 (417)
T TIGR02800 322 GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVST-DGR 399 (417)
T ss_pred CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCc
Confidence 66778899999998888764111237899999886543 3332333456789999999888543222 23555553 455
Q ss_pred EEEEEecCCCCEEEEEE
Q psy10114 761 QVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 761 ~l~sl~gH~~~VtsLaf 777 (819)
....+..+.+.+..++|
T Consensus 400 ~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 400 FRARLPLGNGDVREPAW 416 (417)
T ss_pred eeeECCCCCCCcCCCCC
Confidence 55555444444544444
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=136.58 Aligned_cols=284 Identities=18% Similarity=0.239 Sum_probs=213.6
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC--CCEEEEEecCceEEEeecCCce-
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER--GNLVAVGTHHGYVQVWDVSVAK- 588 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd--G~~LAsGs~DGtI~IWDl~tgk- 588 (819)
..++.+.|+ |+.+++++.|..|.+||...++...- -..+|...|....|-|. ..-+++.+.||.|++=.+...+
T Consensus 143 GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~-f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~ 221 (559)
T KOG1334|consen 143 GCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLS-FESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGY 221 (559)
T ss_pred CccceeeecccCceeeccCccceEEeehhhccCcccc-cccccccchhhhhccCCCCCcCceeccccCceeeeeeccccc
Confidence 457777777 57899999999999999988875432 23678888888889884 4689999999999988764332
Q ss_pred E--EEEEecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEe-cccC---CeEEEEECCCC-CEEEEEE
Q psy10114 589 Q--VHKLVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLV-GHRQ---EVCGLKWSPDN-QYLASGG 658 (819)
Q Consensus 589 ~--i~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~-gH~~---~VtsLafSpdg-~~LaSGS 658 (819)
+ ...+..|.++|..++. +...|.+++.|+.+.-.|++........... .+.. ....++..|.. ..+++|+
T Consensus 222 ~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG 301 (559)
T KOG1334|consen 222 VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGG 301 (559)
T ss_pred eecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCC
Confidence 2 3445579999999988 5678999999999999999987643333322 2233 46788888855 4899999
Q ss_pred CCCeEEEEECCCCc------eeEEEe------cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc---------
Q psy10114 659 NDNRLYVWNLHSMS------PLQTYT------EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--------- 717 (819)
Q Consensus 659 ~DGtI~IWDl~t~~------~i~t~~------~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--------- 717 (819)
.|.-+++||.+.-. ++.++. .....|++++++.++.-++++- .|-.|+++.-.-+.
T Consensus 302 ~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSY---nDe~IYLF~~~~~~G~~p~~~s~ 378 (559)
T KOG1334|consen 302 SDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASY---NDEDIYLFNKSMGDGSEPDPSSP 378 (559)
T ss_pred hhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeee---cccceEEeccccccCCCCCCCcc
Confidence 99999999986532 123332 2345799999998888888876 68899999543221
Q ss_pred ---eeEE-E-cC--CCCeEEEE-EccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 718 ---PMQC-V-DT--GSQVCNLA-WSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 718 ---~v~~-l-~~--~s~V~sLa-fSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
.+.. + .| ...|..+- |-|...++++ |+.-|.|.||+-.+++.+.-+.+....|+|+.=+|--..||+++-
T Consensus 379 ~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvS--GSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGi 456 (559)
T KOG1334|consen 379 REQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVS--GSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGI 456 (559)
T ss_pred hhhccchhhcccccccccceeeeccCccceEEe--cCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCC
Confidence 1112 1 12 12355554 4577788887 889999999999999999989887779999999999999999999
Q ss_pred CCcEEEEECCCCce
Q psy10114 790 DETLRFWNVFSKVR 803 (819)
Q Consensus 790 DGtIrIWdl~s~~~ 803 (819)
|..|+||--.+.++
T Consensus 457 d~DVKIWTP~~~er 470 (559)
T KOG1334|consen 457 DHDVKIWTPLTAER 470 (559)
T ss_pred ccceeeecCCcccc
Confidence 99999998754443
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.8e-12 Score=137.71 Aligned_cols=229 Identities=12% Similarity=0.233 Sum_probs=187.4
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEE
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l 635 (819)
.-..+.++.+|++++.|+..|.|..+|..+++....+.- ...|.++.| ....+++.....-+.+||-...+. ..+
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtEl---HCl 206 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQKKYVYVYDNNGTEL---HCL 206 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhhhceEEEecCCCcEE---eeh
Confidence 446789999999999999999999999999988877753 456888999 455555556678899999776443 334
Q ss_pred ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC
Q psy10114 636 VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 636 ~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t 715 (819)
..| ..|..+.|-|..-+|++++..|.+..-|+.+|+.+..+....+.+..++-+|.+. ++-.|. ..|+|.+|....
T Consensus 207 k~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~Na-Vih~Gh--snGtVSlWSP~s 282 (545)
T KOG1272|consen 207 KRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNA-VIHLGH--SNGTVSLWSPNS 282 (545)
T ss_pred hhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccc-eEEEcC--CCceEEecCCCC
Confidence 433 5688999999999999999999999999999999999988889999999999876 555554 899999999998
Q ss_pred CceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 716 GQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 716 g~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
.+++..+ .|.++|.++++.++|+++++ .+.|..++|||++...++.++.. ..+...+++|..| .||.+-+ ..|.
T Consensus 283 kePLvKiLcH~g~V~siAv~~~G~YMaT--tG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg-lLA~~~G-~~v~ 357 (545)
T KOG1272|consen 283 KEPLVKILCHRGPVSSIAVDRGGRYMAT--TGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG-LLALSYG-DHVQ 357 (545)
T ss_pred cchHHHHHhcCCCcceEEECCCCcEEee--cccccceeEeeeccccccceeec-CCCcccccccccc-ceeeecC-Ceee
Confidence 8876554 67899999999999999999 66899999999999988877765 4567889998776 4444444 4789
Q ss_pred EEEC
Q psy10114 795 FWNV 798 (819)
Q Consensus 795 IWdl 798 (819)
+|.=
T Consensus 358 iw~d 361 (545)
T KOG1272|consen 358 IWKD 361 (545)
T ss_pred eehh
Confidence 9953
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-09 Score=122.96 Aligned_cols=281 Identities=16% Similarity=0.236 Sum_probs=188.8
Q ss_pred EEEEEec-CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-----ec-----CceEEEeec
Q psy10114 516 LNLVDWS-SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-----TH-----HGYVQVWDV 584 (819)
Q Consensus 516 v~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-----s~-----DGtI~IWDl 584 (819)
++....+ ++.+++.+.+..|.|++..++.. .++... ..+.++.|+|-|++|.+= .. .-.+++|++
T Consensus 37 ~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~~-~lt~~~---~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~v 112 (566)
T KOG2315|consen 37 CNVFAYSNNGRLFAYSDNQVVKVFEIATLKV-VLCVEL---KKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNV 112 (566)
T ss_pred ceeEEEcCCCcEEEEEcCCeEEEEEccCCcE-EEEecc---ceeeeeeecccccccccccccccccCCCCCCCceeeeee
Confidence 3444445 46788899999999999988863 233322 378999999999988762 11 235789999
Q ss_pred CCceEEEEEecCCCCeEEEEeCC-ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC--EEEE-----
Q psy10114 585 SVAKQVHKLVGHTARVGALAWNG-DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ--YLAS----- 656 (819)
Q Consensus 585 ~tgk~i~tl~gHs~~V~sLawng-~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~--~LaS----- 656 (819)
+++.....+......-++..|+. +.+++--..+.+.+||..+.+. ..-.-|...|+.+.+||.+. .+|+
T Consensus 113 et~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~---~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~ 189 (566)
T KOG2315|consen 113 ETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKT---IQHKLSVSGITMLSLSPGPEPPFVAVYVPEK 189 (566)
T ss_pred ccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccc---eeeeeeccceeeEEecCCCCCceEEEEccCC
Confidence 99665555554333336777743 3444444456788888776331 22233455666666666422 2322
Q ss_pred EECCCeEEEEEC---------------------------------------------------------CCCceeEEEec
Q psy10114 657 GGNDNRLYVWNL---------------------------------------------------------HSMSPLQTYTE 679 (819)
Q Consensus 657 GS~DGtI~IWDl---------------------------------------------------------~t~~~i~t~~~ 679 (819)
+|.-+.|+||.. +..+..-.+ .
T Consensus 190 kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~ 268 (566)
T KOG2315|consen 190 KGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-L 268 (566)
T ss_pred CCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-C
Confidence 222334554443 211111111 2
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE-ecCCCeEEEEECCC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-GYSQNQILVWKYPT 758 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts-GssDg~I~IWDl~s 758 (819)
..++|.++.|+|++..+.++- |..-.++.|+|++ +.++..+. .++-+++-|+|.|+.++.++ |.-.|.|.+||+.+
T Consensus 269 k~GPVhdv~W~~s~~EF~Vvy-GfMPAkvtifnlr-~~~v~df~-egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n 345 (566)
T KOG2315|consen 269 KEGPVHDVTWSPSGREFAVVY-GFMPAKVTIFNLR-GKPVFDFP-EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN 345 (566)
T ss_pred CCCCceEEEECCCCCEEEEEE-ecccceEEEEcCC-CCEeEeCC-CCCccceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence 368999999999999877766 4688899999986 55665554 35567889999999988864 44578999999999
Q ss_pred CcEEEEEecCCCCEEEEEEecCCCEEEEEeC------CCcEEEEECCCCceeccccc
Q psy10114 759 LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG------DETLRFWNVFSKVRSQRESK 809 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~------DGtIrIWdl~s~~~~~k~~~ 809 (819)
.+++..+.... -+-+.|+|||++++|++. |+.++||+......-.++-+
T Consensus 346 ~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~~~f~ 400 (566)
T KOG2315|consen 346 RKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHEKMFK 400 (566)
T ss_pred hhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeehhhhh
Confidence 99998887554 456899999999999875 78899999977665544433
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.3e-09 Score=111.50 Aligned_cols=272 Identities=15% Similarity=0.210 Sum_probs=185.0
Q ss_pred EEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecC------ceEEEeecCCceEE
Q psy10114 519 VDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHH------GYVQVWDVSVAKQV 590 (819)
Q Consensus 519 ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~D------GtI~IWDl~tgk~i 590 (819)
++|+.+ ..++++.+...++++.+--+.....+....+-.+.-+-| ..+++|. |+.+ ..|.|||=...+++
T Consensus 11 vs~NQD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD~k~~~i 88 (346)
T KOG2111|consen 11 VSFNQDHSCFAVATDTGFRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDDLKERCI 88 (346)
T ss_pred EEEccCCceEEEEecCceEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEecccCcEE
Confidence 778854 577888999999999865322111122211122222222 3445553 4333 47999997777777
Q ss_pred EEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCC-CccceEEEecccCCeEEEEECCCCCEEEEE-ECCCeEEEEEC
Q psy10114 591 HKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTP-NSQSERRLVGHRQEVCGLKWSPDNQYLASG-GNDNRLYVWNL 668 (819)
Q Consensus 591 ~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~-~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DGtI~IWDl 668 (819)
.++. ...+|.++.+..+.+++.- .+.|.+|...+. +.............+++++-+.+...||.- -.-|.|+|-|+
T Consensus 89 ~el~-f~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL 166 (346)
T KOG2111|consen 89 IELS-FNSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDL 166 (346)
T ss_pred EEEE-eccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEh
Confidence 7765 5678999999988877765 468999998743 222222223334557777665566666654 45689999999
Q ss_pred CCCce--eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe-EEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEE
Q psy10114 669 HSMSP--LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC-IRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVS 742 (819)
Q Consensus 669 ~t~~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt-IrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~Las 742 (819)
...+. ...+.+|.+.|.+++.+-+|. ++|+++ ..|+ |||||..+|+.++++.-+ ..|.+++|||++.++++
T Consensus 167 ~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt-~vATaS--tkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~Lav 243 (346)
T KOG2111|consen 167 ASTKPNAPSIINAHDSDIACVALNLQGT-LVATAS--TKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAV 243 (346)
T ss_pred hhcCcCCceEEEcccCceeEEEEcCCcc-EEEEec--cCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEE
Confidence 77655 477889999999999999998 555554 5555 899999999999999654 56999999999999999
Q ss_pred EEecCCCeEEEEECCCCc---E---------------------EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 743 THGYSQNQILVWKYPTLT---Q---------------------VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k---~---------------------l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.++.|++.||.++... . ...++-..+...-++|-.+.+.++..+.||+-+=+.+
T Consensus 244 --sSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f 321 (346)
T KOG2111|consen 244 --SSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKF 321 (346)
T ss_pred --EcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEe
Confidence 7789999999876321 1 1112222445556777777567777778887665544
Q ss_pred C
Q psy10114 799 F 799 (819)
Q Consensus 799 ~ 799 (819)
.
T Consensus 322 ~ 322 (346)
T KOG2111|consen 322 D 322 (346)
T ss_pred c
Confidence 3
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-11 Score=132.05 Aligned_cols=193 Identities=23% Similarity=0.284 Sum_probs=145.2
Q ss_pred EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEe
Q psy10114 559 TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 559 tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~ 636 (819)
.+++|+.+|..+++|+.||+++||+..+...+.....|.+.|.++.| ||..|++-+.| ..++|+.+++......+-.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 78999999999999999999999999888888888899999999999 67799999999 9999999997532222212
Q ss_pred cccCCeEEEEECCCC-----CEEEEEECCCeEEEEECCCCc-----eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 637 GHRQEVCGLKWSPDN-----QYLASGGNDNRLYVWNLHSMS-----PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 637 gH~~~VtsLafSpdg-----~~LaSGS~DGtI~IWDl~t~~-----~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
........+.|+.|+ ..++.-...+.|..||+...+ ...+.......|.+++.+++|+.++ .| +.||
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~A-lG--T~dG 303 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLA-LG--TMDG 303 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEE-Ee--ccCC
Confidence 333445667788776 233334445567776654322 1222222345799999999999554 44 4899
Q ss_pred eEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 707 CIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
.|-+++..+-+.++.++ |..-|+.+.|+|+.++++.++ .+.+..+..+.
T Consensus 304 sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svS--s~~~~~v~~l~ 354 (398)
T KOG0771|consen 304 SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVS--SDNEAAVTKLA 354 (398)
T ss_pred cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccc--cCCceeEEEEe
Confidence 99999999888877774 667899999999999999954 45666665543
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.6e-10 Score=127.56 Aligned_cols=215 Identities=17% Similarity=0.173 Sum_probs=141.8
Q ss_pred ceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC---CCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 577 GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR---DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~---DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
..|.++|. +++..+.+..+...+.+.+| +|+.|+..+. ...|.+||+.+++.. .+....+.+.+.+|+|||
T Consensus 176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~---~l~~~~g~~~~~~~SPDG 251 (427)
T PRK02889 176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR---VVANFKGSNSAPAWSPDG 251 (427)
T ss_pred cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE---EeecCCCCccceEECCCC
Confidence 35777776 45555566677888999999 5667776553 246999999887632 233344556789999999
Q ss_pred CEEEE-EECCCeEEEE--ECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE--ECCCCceeEEEcCCC
Q psy10114 652 QYLAS-GGNDNRLYVW--NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW--NTLTGQPMQCVDTGS 726 (819)
Q Consensus 652 ~~LaS-GS~DGtI~IW--Dl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW--Dl~tg~~v~~l~~~s 726 (819)
+.++. .+.+|...+| |..++. ...+..+.+......|+|||+.++.++. .++...+| |+.+++.......+.
T Consensus 252 ~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~--~~g~~~Iy~~~~~~g~~~~lt~~g~ 328 (427)
T PRK02889 252 RTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSD--RGGAPQIYRMPASGGAAQRVTFTGS 328 (427)
T ss_pred CEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEec--CCCCcEEEEEECCCCceEEEecCCC
Confidence 98874 5667765555 554444 4556556666677899999998887653 34455555 555555433333334
Q ss_pred CeEEEEEccCCCEEEEEEecC-CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC---cEEEEECCC
Q psy10114 727 QVCNLAWSKHSSELVSTHGYS-QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE---TLRFWNVFS 800 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGss-Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG---tIrIWdl~s 800 (819)
.....+|+|||+.++.++... +..|.+||+.+++.. .+... ......+|+|||+.|+.++.++ .+.+-++..
T Consensus 329 ~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g 404 (427)
T PRK02889 329 YNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDG 404 (427)
T ss_pred CcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCC
Confidence 455689999999998754221 236999999887654 33322 2346789999999998877554 355555543
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.9e-09 Score=118.62 Aligned_cols=242 Identities=14% Similarity=0.157 Sum_probs=162.7
Q ss_pred EecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecC--
Q psy10114 520 DWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGH-- 596 (819)
Q Consensus 520 dwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gH-- 596 (819)
+.++.++.+++.||.|.++|+.+++....... .....++++|+||++++++. .++.+.++|.++.+.++.+...
T Consensus 45 s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~---G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~ 121 (369)
T PF02239_consen 45 SPDGRYLYVANRDGTVSVIDLATGKVVATIKV---GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGM 121 (369)
T ss_dssp TT-SSEEEEEETTSEEEEEETTSSSEEEEEE----SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE
T ss_pred cCCCCEEEEEcCCCeEEEEECCcccEEEEEec---CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccc
Confidence 44567888889999999999999997764443 35678899999999999876 5899999999999999887632
Q ss_pred -----CCCeEEEEe--CCc-eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE-ECCCeEEEEE
Q psy10114 597 -----TARVGALAW--NGD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG-GNDNRLYVWN 667 (819)
Q Consensus 597 -----s~~V~sLaw--ng~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DGtI~IWD 667 (819)
..++.++.. ... ++++.-+.+.|.+-|........ ...........+..|+|++++++.+ ..++.|-++|
T Consensus 122 ~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~-~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD 200 (369)
T PF02239_consen 122 PVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK-VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVID 200 (369)
T ss_dssp -TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE-EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred cccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc-eeeecccccccccccCcccceeeecccccceeEEEe
Confidence 346667765 233 45555566899888987765332 2333344567789999999987665 4566788888
Q ss_pred CCCCceeEEE-------------------------------------------------------ecCCCCEEEEEEcCC
Q psy10114 668 LHSMSPLQTY-------------------------------------------------------TEHLAAVKAIAWSPH 692 (819)
Q Consensus 668 l~t~~~i~t~-------------------------------------------------------~~h~~~VtsLafSPd 692 (819)
.++++.+..+ ....++ ..+..+|+
T Consensus 201 ~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~ 279 (369)
T PF02239_consen 201 TKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPD 279 (369)
T ss_dssp TTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT
T ss_pred eccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCC
Confidence 7765533221 111112 34667899
Q ss_pred CCeEEEE-EccCCCCeEEEEECCCCceeEEEcCCC--CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe
Q psy10114 693 HHGLLAS-GGGTADRCIRFWNTLTGQPMQCVDTGS--QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT 766 (819)
Q Consensus 693 g~~LLaS-GgGs~DgtIrIWDl~tg~~v~~l~~~s--~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~ 766 (819)
++++.+. -.+...++|.++|.++.+.+..+.... .+..+.|+++|+++.++....++.|.++|..+.+.+.++.
T Consensus 280 s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 280 SRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp -SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred CccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 9988886 112256899999999998888876443 4999999999999999776666799999999999998887
|
... |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-09 Score=122.84 Aligned_cols=236 Identities=14% Similarity=0.099 Sum_probs=154.1
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---ceEEEeecCCceEEEEEecCCCCeEEEEe--CCc
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGD 608 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~ 608 (819)
.|.++|...+....+ ..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+.+.+| +|+
T Consensus 180 ~l~~~d~~g~~~~~l---~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~ 255 (430)
T PRK00178 180 TLQRSDYDGARAVTL---LQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGS 255 (430)
T ss_pred EEEEECCCCCCceEE---ecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCC
Confidence 478888876654433 2346778999999999999876643 368899998876533 3333344556788 566
Q ss_pred eee-eccCCC--eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC---CeEEEEECCCCceeEEEecCCC
Q psy10114 609 MLS-SGSRDR--MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND---NRLYVWNLHSMSPLQTYTEHLA 682 (819)
Q Consensus 609 ~La-SGS~DG--tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D---GtI~IWDl~t~~~i~t~~~h~~ 682 (819)
.|+ +.+.+| .|.++|+.+++. ..+..+........|+|||+.++..+.. ..|+++|+.+++... +.....
T Consensus 256 ~la~~~~~~g~~~Iy~~d~~~~~~---~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~ 331 (430)
T PRK00178 256 KLAFVLSKDGNPEIYVMDLASRQL---SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGN 331 (430)
T ss_pred EEEEEEccCCCceEEEEECCCCCe---EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCC
Confidence 665 444454 688889987653 3344555566778999999988776643 368888888776433 222223
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC-CCeEEEEECCCCcE
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS-QNQILVWKYPTLTQ 761 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss-Dg~I~IWDl~s~k~ 761 (819)
.....+|+|+|+.++.+........|.++|+.+++... +..........|+|||+.++.+.... ...+.+.+.. +..
T Consensus 332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~ 409 (430)
T PRK00178 332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRV 409 (430)
T ss_pred CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCc
Confidence 33467899999998887641122368899998886533 32222334568999999998864321 2346677764 344
Q ss_pred EEEEecCCCCEEEEEEec
Q psy10114 762 VAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSp 779 (819)
...+..+.+.+...+|+|
T Consensus 410 ~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 410 RLPLPTAQGEVREPSWSP 427 (430)
T ss_pred eEECcCCCCCcCCCccCC
Confidence 445555556677777776
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.3e-10 Score=119.85 Aligned_cols=277 Identities=21% Similarity=0.300 Sum_probs=194.4
Q ss_pred EEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEE-EEEecCceEEEeecCCceEEEEEec
Q psy10114 517 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLV-AVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 517 ~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
.+++.+|+.+++.+.- .+.|-|..+-++.++... -+.|.-+.|..|.-++ .+...|+.|++|++...+-...+..
T Consensus 14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c---ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde 89 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC---LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE 89 (447)
T ss_pred eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH---HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc
Confidence 3455566676665544 888889888766544332 3678889999887654 4567789999999999999999998
Q ss_pred CCCCeEEEEeC--C-ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-------------
Q psy10114 596 HTARVGALAWN--G-DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN------------- 659 (819)
Q Consensus 596 Hs~~V~sLawn--g-~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~------------- 659 (819)
..+.+.+++|+ | ..|.+...|-.|.+|.+.+.... .+.--+..+.+++|+|||++.+..+.
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~---~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~ 166 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY---LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCK 166 (447)
T ss_pred CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE---EecccccCceeEEECCCCceeeeeecccHHHHHHHHhhH
Confidence 99999999994 5 47788888999999999886532 22323345688889999988777653
Q ss_pred -----------------------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 660 -----------------------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 660 -----------------------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
++.+.+||.--.-.+..+ +-.-.+..++|+|.++ +++.|+ .|+.+|+-|--+-
T Consensus 167 ~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aY-e~~lG~k~v~wsP~~q-flavGs--yD~~lrvlnh~tW 242 (447)
T KOG4497|consen 167 AWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAY-ERGLGLKFVEWSPCNQ-FLAVGS--YDQMLRVLNHFTW 242 (447)
T ss_pred HHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeee-eeccceeEEEeccccc-eEEeec--cchhhhhhceeee
Confidence 223445553211111112 2245789999999887 555554 8998887653211
Q ss_pred ce------------------------------------------------------------eEEEc-------CCCCeE
Q psy10114 717 QP------------------------------------------------------------MQCVD-------TGSQVC 729 (819)
Q Consensus 717 ~~------------------------------------------------------------v~~l~-------~~s~V~ 729 (819)
+. +..++ ....+.
T Consensus 243 k~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g 322 (447)
T KOG4497|consen 243 KPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAG 322 (447)
T ss_pred eehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccc
Confidence 00 00011 112466
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
-++|++|..++++.....-+.+.+||+...+.-+.+. ...+|....|+|....|+.+.+...+++|.........
T Consensus 323 ~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~ 397 (447)
T KOG4497|consen 323 KLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVG 397 (447)
T ss_pred eeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEe
Confidence 7999999999999665566789999998776655443 45689999999999999988888899999987754443
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=135.76 Aligned_cols=262 Identities=20% Similarity=0.258 Sum_probs=202.2
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG 601 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~ 601 (819)
+|..++.+|..|.|-.+|..++++..-..+ ...|.++.|-.+.+++|++-. ..+.||| ..|..++.++.| .+|.
T Consensus 140 nGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v---~Etv~Dv~~LHneq~~AVAQK-~y~yvYD-~~GtElHClk~~-~~v~ 213 (545)
T KOG1272|consen 140 NGRHLLLGGRKGHLAAFDWVTKKLHFEINV---METVRDVTFLHNEQFFAVAQK-KYVYVYD-NNGTELHCLKRH-IRVA 213 (545)
T ss_pred CccEEEecCCccceeeeecccceeeeeeeh---hhhhhhhhhhcchHHHHhhhh-ceEEEec-CCCcEEeehhhc-Cchh
Confidence 477899999999999999999887553333 468999999999999988765 5799999 557777777654 4678
Q ss_pred EEEeCC--ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec
Q psy10114 602 ALAWNG--DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 602 sLawng--~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~ 679 (819)
.+.|-+ -+|++++..|.+..-|+.+++. +..+....+.+..++-+|-+..+-+|...|+|.+|.....+++..+-.
T Consensus 214 rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl--Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLc 291 (545)
T KOG1272|consen 214 RLEFLPYHFLLVAASEAGFLKYQDVSTGKL--VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILC 291 (545)
T ss_pred hhcccchhheeeecccCCceEEEeechhhh--hHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHh
Confidence 888844 3788999999999999999874 355555667888899999999999999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC-C
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP-T 758 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~-s 758 (819)
|.++|.+|++.++|.+++++| .|+.++|||+++-..+.++........+++|..|-..++ ....+.+|.-. .
T Consensus 292 H~g~V~siAv~~~G~YMaTtG---~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglLA~~----~G~~v~iw~d~~~ 364 (545)
T KOG1272|consen 292 HRGPVSSIAVDRGGRYMATTG---LDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLLALS----YGDHVQIWKDALK 364 (545)
T ss_pred cCCCcceEEECCCCcEEeecc---cccceeEeeeccccccceeecCCCccccccccccceeee----cCCeeeeehhhhc
Confidence 999999999999999888876 799999999999888888877778888999877644333 23578888632 2
Q ss_pred --CcEEEEEecC--CCCEEEEEEecCCC------------EEEEEeCCCcEEEEEC
Q psy10114 759 --LTQVAKLTGH--SYRVLYLAMSPDGE------------AIVTGAGDETLRFWNV 798 (819)
Q Consensus 759 --~k~l~sl~gH--~~~VtsLafSpDG~------------~LaSGS~DGtIrIWdl 798 (819)
+..-..+-.| .+.|.++.|.|-.. .|+-|++|-..--|.-
T Consensus 365 ~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsilVPGsGePN~Ds~e~ 420 (545)
T KOG1272|consen 365 GSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSILVPGSGEPNYDSLED 420 (545)
T ss_pred CCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeEeccCCCCCCcchhcc
Confidence 1111111122 35788888888543 4444555554444443
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.6e-09 Score=120.54 Aligned_cols=218 Identities=18% Similarity=0.182 Sum_probs=145.5
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCC---CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRD---RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~D---GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
.|.++|.+.+. .+.+..+...+.+.+| +|+.|+..+.+ ..|.+||+.+++... +....+.+....|+|||+
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~---l~~~~g~~~~~~~SpDG~ 255 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ---ITNFEGLNGAPAWSPDGS 255 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE---ccCCCCCcCCeEECCCCC
Confidence 47777876443 4556667778888999 57777665433 468999998866432 233334455789999999
Q ss_pred EEEE-EECCC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeE
Q psy10114 653 YLAS-GGNDN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729 (819)
Q Consensus 653 ~LaS-GS~DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~ 729 (819)
.++. .+.+| .|+++|+.+++. ..+..+........|+|+|+.++.++....+..|.++|+.+++.......+....
T Consensus 256 ~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~ 334 (430)
T PRK00178 256 KLAFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNA 334 (430)
T ss_pred EEEEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCcc
Confidence 8874 44444 688899988764 3455556666778999999988877642223468888988887544333333445
Q ss_pred EEEEccCCCEEEEEEecC-CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC---CcEEEEECCCCc
Q psy10114 730 NLAWSKHSSELVSTHGYS-QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD---ETLRFWNVFSKV 802 (819)
Q Consensus 730 sLafSpdg~~LastsGss-Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D---GtIrIWdl~s~~ 802 (819)
...|+|+|+.++.++... ...|.++|+.+++.. .+.. ........|+|||+.++..+.+ ..|.+.++..+.
T Consensus 335 ~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~ 409 (430)
T PRK00178 335 RPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRV 409 (430)
T ss_pred ceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence 678999999998864321 236888998877643 3332 2223356899999999876654 357777776543
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-09 Score=121.67 Aligned_cols=233 Identities=17% Similarity=0.128 Sum_probs=151.8
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-c--eEEEeecCCceEEEEEecCCCCeEEEEe--CCc
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-G--YVQVWDVSVAKQVHKLVGHTARVGALAW--NGD 608 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-G--tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~ 608 (819)
.+.++|....+...+ ..+...+.+..|+|||+.|+..+.+ | .|.++|+.+++... +....+.....+| +|+
T Consensus 199 ~l~i~d~dG~~~~~l---~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~ 274 (448)
T PRK04792 199 QLMIADYDGYNEQML---LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGK 274 (448)
T ss_pred EEEEEeCCCCCceEe---ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCC
Confidence 577778766554332 2345688899999999999876543 3 58888988776432 2222333446777 566
Q ss_pred eee-eccCCCe--EEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-CC--eEEEEECCCCceeEEEecCCC
Q psy10114 609 MLS-SGSRDRM--ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-DN--RLYVWNLHSMSPLQTYTEHLA 682 (819)
Q Consensus 609 ~La-SGS~DGt--I~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DG--tI~IWDl~t~~~i~t~~~h~~ 682 (819)
.|+ +.+.+|. |.++|+.+++. ..+..+.......+|+|||+.++..+. ++ .|+++|+.+++... +.....
T Consensus 275 ~La~~~~~~g~~~Iy~~dl~tg~~---~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~ 350 (448)
T PRK04792 275 KLALVLSKDGQPEIYVVDIATKAL---TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGE 350 (448)
T ss_pred EEEEEEeCCCCeEEEEEECCCCCe---EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCC
Confidence 565 4556664 77778876542 344445556678899999998877664 33 57778887776433 322222
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCC--eEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC--eEEEEECCC
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADR--CIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN--QILVWKYPT 758 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg--~I~IWDl~s 758 (819)
.....+|+|+|+.++.++. .++ .|.++|+.+++... +..........|+|||+.++.+.. .++ .+.+++. +
T Consensus 351 ~~~~~~~SpDG~~l~~~~~--~~g~~~I~~~dl~~g~~~~-lt~~~~d~~ps~spdG~~I~~~~~-~~g~~~l~~~~~-~ 425 (448)
T PRK04792 351 QNLGGSITPDGRSMIMVNR--TNGKFNIARQDLETGAMQV-LTSTRLDESPSVAPNGTMVIYSTT-YQGKQVLAAVSI-D 425 (448)
T ss_pred CCcCeeECCCCCEEEEEEe--cCCceEEEEEECCCCCeEE-ccCCCCCCCceECCCCCEEEEEEe-cCCceEEEEEEC-C
Confidence 3345789999999888764 333 56668888876533 322222335589999999887643 333 4677776 5
Q ss_pred CcEEEEEecCCCCEEEEEEec
Q psy10114 759 LTQVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLafSp 779 (819)
++....+..+.+.+...+|+|
T Consensus 426 G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 426 GRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred CCceEECcCCCCCcCCCccCC
Confidence 666666766666777888876
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.1e-10 Score=119.36 Aligned_cols=243 Identities=16% Similarity=0.294 Sum_probs=175.6
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-----EEEEEecCC------------CCeEEEEe----CCceeeec
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-----QVHKLVGHT------------ARVGALAW----NGDMLSSG 613 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-----~i~tl~gHs------------~~V~sLaw----ng~~LaSG 613 (819)
.+-|.++.|..+|.+||+|..+|.|.++.-+... ....++.|. ..|..+.| +...++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4678999999999999999999999999654322 233444453 35778888 34577888
Q ss_pred cCCCeEEEEECCCCCccc------------------eE----------------EEecccCCeEEEEECCCCCEEEEEEC
Q psy10114 614 SRDRMILQRDVRTPNSQS------------------ER----------------RLVGHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 614 S~DGtI~IWDi~t~~~~~------------------v~----------------~l~gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
+.|++|++|.++...... +. .-.+|.-.|.++.++.|+..++++ .
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence 899999999886543211 00 113477789999999999988875 5
Q ss_pred CCeEEEEECCCCceeEE---Eec-----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE----EE-----
Q psy10114 660 DNRLYVWNLHSMSPLQT---YTE-----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ----CV----- 722 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t---~~~-----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~----~l----- 722 (819)
|=.|.+|+++-...-.. ++. -..-|++..|+|....+++-++ ..|+|++-|++...... .+
T Consensus 184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSS--SKGtIrLcDmR~~aLCd~hsKlfEeped 261 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSS--SKGTIRLCDMRQSALCDAHSKLFEEPED 261 (433)
T ss_pred ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEec--CCCcEEEeechhhhhhcchhhhhccccC
Confidence 67899999864332222 222 2346888999998877766554 79999999998532211 01
Q ss_pred --------cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC-CCcEEEEEecCCC------------C---EEEEEEe
Q psy10114 723 --------DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP-TLTQVAKLTGHSY------------R---VLYLAMS 778 (819)
Q Consensus 723 --------~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~-s~k~l~sl~gH~~------------~---VtsLafS 778 (819)
+.-+.|..+.|+++|+++++ - +--+|++||+. ..+++.+.+-|.. . -..++|+
T Consensus 262 p~~rsffseiIsSISDvKFs~sGryils--R-Dyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~s 338 (433)
T KOG1354|consen 262 PSSRSFFSEIISSISDVKFSHSGRYILS--R-DYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWS 338 (433)
T ss_pred CcchhhHHHHhhhhhceEEccCCcEEEE--e-ccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEc
Confidence 01256889999999999998 2 34789999994 6677777776632 2 2457899
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 779 PDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 779 pDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
.++.+++||+....++++++..+..
T Consensus 339 g~~~~v~TGsy~n~frvf~~~~gsk 363 (433)
T KOG1354|consen 339 GNDSYVMTGSYNNVFRVFNLARGSK 363 (433)
T ss_pred CCcceEecccccceEEEecCCCCcc
Confidence 9999999999999999999766544
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.8e-10 Score=121.22 Aligned_cols=212 Identities=15% Similarity=0.254 Sum_probs=165.6
Q ss_pred cCCeEEEEECCCeEEEEEcCCCc--eEEEEeccCCCCCeEEEEEcCCC-CEEEEEecC--ceEEEeecCCceEEEEEecC
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQ--VTRLCDLSADGNSVTSVAWNERG-NLVAVGTHH--GYVQVWDVSVAKQVHKLVGH 596 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~--~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~D--GtI~IWDl~tgk~i~tl~gH 596 (819)
....++++-.+|.+.+|....+. -.++..+.. ...+..+.-++.. ..+|+|+.. ..+.|||+++.+++.+-+.-
T Consensus 114 ~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNv 192 (412)
T KOG3881|consen 114 ADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNV 192 (412)
T ss_pred cCCEEEEEecCCcEEEEeccCCccccccceeeec-CCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCC
Confidence 45678888899999999988443 111222222 2556667666644 466669888 88999999998777665432
Q ss_pred C---------CCeEEEEe-C---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 597 T---------ARVGALAW-N---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 597 s---------~~V~sLaw-n---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
. -.++++.| . ...|++++.-+.+++||.+.+. .++..+......++++...|+++++++|..-|.+
T Consensus 193 pnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR-RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l 271 (412)
T KOG3881|consen 193 PNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR-RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQL 271 (412)
T ss_pred CCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC-cceeEeccccCcceeeeecCCCcEEEEecccchh
Confidence 1 23456777 3 4589999999999999999655 5677787788899999999999999999999999
Q ss_pred EEEECCCCceeEE-EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCC
Q psy10114 664 YVWNLHSMSPLQT-YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSS 738 (819)
Q Consensus 664 ~IWDl~t~~~i~t-~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~ 738 (819)
..||++.++.... +++-.+.|++|..+|.++ +++++| -|+.+||+|+.+.+.+...-..+..+++.+.++-+
T Consensus 272 ~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~-~las~G--LDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~~n 344 (412)
T KOG3881|consen 272 AKFDLRGGKLLGCGLKGITGSIRSIHCHPTHP-VLASCG--LDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDDVN 344 (412)
T ss_pred heecccCceeeccccCCccCCcceEEEcCCCc-eEEeec--cceeEEEeecccchhhhhhhhhccccEEEecCCcc
Confidence 9999999988766 888999999999999988 455555 89999999999988877777778888888766543
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.2e-09 Score=118.00 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=146.3
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCC---CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRD---RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~D---GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
.|.++|.. +...+.+..+...+.+.+| +|+.++.++.+ ..|++||+.+++. ..+..+.+.+.+.+|+|||+
T Consensus 171 ~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~---~~~~~~~~~~~~~~~spDg~ 246 (417)
T TIGR02800 171 ELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR---EKVASFPGMNGAPAFSPDGS 246 (417)
T ss_pred eEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE---EEeecCCCCccceEECCCCC
Confidence 57788875 3445556667777888888 56777765533 5799999987653 23344555667789999999
Q ss_pred EEEEE-ECCC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeE
Q psy10114 653 YLASG-GNDN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729 (819)
Q Consensus 653 ~LaSG-S~DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~ 729 (819)
.|+.. +.++ .|++||+.+++. ..+..+.......+|+|+|+.++.++.......|.++|+.+++.......+....
T Consensus 247 ~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~ 325 (417)
T TIGR02800 247 KLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNA 325 (417)
T ss_pred EEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCcc
Confidence 77654 4444 599999987654 3444455555678999999988876541123468888988877554444556677
Q ss_pred EEEEccCCCEEEEEEecC-CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC---cEEEEECCCC
Q psy10114 730 NLAWSKHSSELVSTHGYS-QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE---TLRFWNVFSK 801 (819)
Q Consensus 730 sLafSpdg~~LastsGss-Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG---tIrIWdl~s~ 801 (819)
...|+|+|+.++.+.... ...|.++|+.++... .+... ......+|+|||+.|+.++.++ .+.+.+...+
T Consensus 326 ~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~ 399 (417)
T TIGR02800 326 SPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGR 399 (417)
T ss_pred CeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCc
Confidence 889999999998854221 127889998875442 33322 2345678999999988877654 4555565443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-09 Score=122.26 Aligned_cols=236 Identities=15% Similarity=0.252 Sum_probs=173.2
Q ss_pred CCCCeEEEEEcCCCCEE-EEEecCceEEEeecCCceEE----------------------------EEEecCC-------
Q psy10114 554 DGNSVTSVAWNERGNLV-AVGTHHGYVQVWDVSVAKQV----------------------------HKLVGHT------- 597 (819)
Q Consensus 554 h~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk~i----------------------------~tl~gHs------- 597 (819)
+....+.|..+|||+++ |+|...-.|++||+.+-... +.+.-|.
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~ 129 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYR 129 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeee
Confidence 45677899999999865 67888899999998653211 0111111
Q ss_pred CCeE----EEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 598 ARVG----ALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 598 ~~V~----sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
-+|- +++. +.+ |..++....|+-++++.+. .+..+....+.++++..++-..+|++|+.||.|..||.++
T Consensus 130 ~RIP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGr--fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ 206 (703)
T KOG2321|consen 130 TRIPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGR--FLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRD 206 (703)
T ss_pred eecCcCCccccccCCCcc-EEEeecCcceEEEEccccc--cccccccccccceeeeecCccceEEecccCceEEEecchh
Confidence 1111 2222 233 3444444567777777765 4456666678899999999999999999999999999998
Q ss_pred CceeEEEec------CCC-----CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC--CCeEEEEEccC-
Q psy10114 671 MSPLQTYTE------HLA-----AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKH- 736 (819)
Q Consensus 671 ~~~i~t~~~------h~~-----~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpd- 736 (819)
.+.+.++.. |.+ .|+++.|+.+|-.+.+ |+.+|.+.|||+++.+++..-+|+ .+|..+.|.+.
T Consensus 207 ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aV---Gts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~ 283 (703)
T KOG2321|consen 207 KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAV---GTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTD 283 (703)
T ss_pred hhhheeeecccccCCCccccccCcceEEEecCCceeEEe---eccCCcEEEEEcccCCceeecccCCccceeeecccccC
Confidence 876665542 333 4999999998754433 468999999999999998877765 46889999776
Q ss_pred -CCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 737 -SSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 737 -g~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
++.+++ .+...++|||-.+|+....+... ..+..+++-|++.++.+|-.++.+..|=+.
T Consensus 284 ~q~~v~S---~Dk~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 284 QQNKVVS---MDKRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred CCceEEe---cchHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEecCCCcceeEEcc
Confidence 344554 35678999999999999888744 449999999999999999988887766554
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=2e-10 Score=128.54 Aligned_cols=167 Identities=21% Similarity=0.332 Sum_probs=126.8
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccC--CCCCeEEEEEcCCC-CEEEEEecCceEEEeecCC-------------
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSA--DGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSV------------- 586 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~--h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~t------------- 586 (819)
+-.++.+-..|.|.+.|....+..++..... ....|+|+.|-|.+ ..+.++-.+|.+.++|.+-
T Consensus 185 g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k 264 (636)
T KOG2394|consen 185 GLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALK 264 (636)
T ss_pred CcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccC
Confidence 3457778888999999887654443322221 24789999999855 5666777899999997631
Q ss_pred -ceE--EEEEe------------cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC
Q psy10114 587 -AKQ--VHKLV------------GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP 649 (819)
Q Consensus 587 -gk~--i~tl~------------gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp 649 (819)
+.. +.+-+ --.+.|...+| +|.+||+.|.||.++|+|..+.+. ...++.--+...|++|||
T Consensus 265 ~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eL--lg~mkSYFGGLLCvcWSP 342 (636)
T KOG2394|consen 265 DGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQEL--LGVMKSYFGGLLCVCWSP 342 (636)
T ss_pred CCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHH--HHHHHhhccceEEEEEcC
Confidence 111 11111 12345667777 678999999999999999988553 344445557899999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcC
Q psy10114 650 DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691 (819)
Q Consensus 650 dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP 691 (819)
||+++++|++|.-|.||.+...+.+..-++|+..|..++|.|
T Consensus 343 DGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 343 DGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred CccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 999999999999999999999999999999999999999983
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.2e-09 Score=119.23 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=153.1
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEE---EEecCc--eEEEeecCCceEEEEEecCCCCeEEEEe--
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA---VGTHHG--YVQVWDVSVAKQVHKLVGHTARVGALAW-- 605 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LA---sGs~DG--tI~IWDl~tgk~i~tl~gHs~~V~sLaw-- 605 (819)
+.|.+.|...++..++. .....+.+-+|+|||+.++ +...+| .|.+.++.+++..+ +....+.....+|
T Consensus 165 ~~l~~~d~dG~~~~~lt---~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSP 240 (428)
T PRK01029 165 GELWSVDYDGQNLRPLT---QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSP 240 (428)
T ss_pred ceEEEEcCCCCCceEcc---cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECC
Confidence 46888888777655432 2345667889999997532 444444 57777887765433 3333444456777
Q ss_pred CCceeeecc-C----CCeEEEEECCCCCc-cceEEEecccCCeEEEEECCCCCEEEEEE-CCCe--EEEEECCC-CceeE
Q psy10114 606 NGDMLSSGS-R----DRMILQRDVRTPNS-QSERRLVGHRQEVCGLKWSPDNQYLASGG-NDNR--LYVWNLHS-MSPLQ 675 (819)
Q Consensus 606 ng~~LaSGS-~----DGtI~IWDi~t~~~-~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~DGt--I~IWDl~t-~~~i~ 675 (819)
+|+.|+..+ . |..+..|++..+.. .......+........+|+|||+.|+..+ .+|. |.++++.. +....
T Consensus 241 DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~ 320 (428)
T PRK01029 241 RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPR 320 (428)
T ss_pred CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceE
Confidence 576666433 2 33344467665321 11222222223446789999999888766 3564 44445532 23344
Q ss_pred EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe-cCCCeEEEE
Q psy10114 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG-YSQNQILVW 754 (819)
Q Consensus 676 t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG-ssDg~I~IW 754 (819)
.+..+...+...+|+|+|+.++.++.......|.+||+.+++..........+....|+|||+.++.++. .....|.++
T Consensus 321 ~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v 400 (428)
T PRK01029 321 LLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLI 400 (428)
T ss_pred EeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 5555556678899999999888876422235799999998876554444456788999999999886532 234578889
Q ss_pred ECCCCcEEEEEecCCCCEEEEEEecCC
Q psy10114 755 KYPTLTQVAKLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 755 Dl~s~k~l~sl~gH~~~VtsLafSpDG 781 (819)
|+.+++... +....+.+...+|+|-.
T Consensus 401 dl~~g~~~~-Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 401 SLITKKTRK-IVIGSGEKRFPSWGAFP 426 (428)
T ss_pred ECCCCCEEE-eecCCCcccCceecCCC
Confidence 988766543 33345566778888753
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-09 Score=113.99 Aligned_cols=268 Identities=17% Similarity=0.202 Sum_probs=187.1
Q ss_pred CCeEEEEEcCCCceEEEEecc-CCCCCeEEEEEcC---CCC-EEEEEecCceEEEeecCCceEEEEEecCC---CC---e
Q psy10114 532 GSCVYLWSACTSQVTRLCDLS-ADGNSVTSVAWNE---RGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHT---AR---V 600 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~-~h~~~VtsLafSp---dG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs---~~---V 600 (819)
.|.+.+++..+.+...+-.+. .....+..+.|.. +|. .++-+..+|.|+++..........+++-+ -. .
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~ 124 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA 124 (339)
T ss_pred ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence 466788887766544321111 1245677778864 455 66777888999999876555444444322 11 3
Q ss_pred EEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECC-CCceeEE
Q psy10114 601 GALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLH-SMSPLQT 676 (819)
Q Consensus 601 ~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~-t~~~i~t 676 (819)
.++.| .+..++++..+|.+.+-+......+.++..+.|.-+....+|+. +.+.+.+||+|+.+..||++ .++.+..
T Consensus 125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~ 204 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH 204 (339)
T ss_pred eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence 35556 47789999999999977766655555668899999999999987 45688999999999999999 3344443
Q ss_pred -EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC-CCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEE
Q psy10114 677 -YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL-TGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 677 -~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~-tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IW 754 (819)
.+.|...|.+|.-+|.....+++|+ .|.+|++||++ -++++..-..++.|+.+.++|.-...+.+ ...-+-.++-
T Consensus 205 n~kvH~~GV~SI~ss~~~~~~I~TGs--YDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~-~CMh~G~ki~ 281 (339)
T KOG0280|consen 205 NSKVHTSGVVSIYSSPPKPTYIATGS--YDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLA-ACMHNGAKIL 281 (339)
T ss_pred cceeeecceEEEecCCCCCceEEEec--cccceeeeehhcccCccccCccccceEEEEecchhhhHHHH-HHHhcCceEE
Confidence 4568899999999999888899976 99999999999 58888888888999999999965422221 2233445555
Q ss_pred ECCCC--c---EEEEEecCCCCEEEEEEecCCCEEEEEeC-CCcEE-EEECCCCc
Q psy10114 755 KYPTL--T---QVAKLTGHSYRVLYLAMSPDGEAIVTGAG-DETLR-FWNVFSKV 802 (819)
Q Consensus 755 Dl~s~--k---~l~sl~gH~~~VtsLafSpDG~~LaSGS~-DGtIr-IWdl~s~~ 802 (819)
+.... + .....+.|.+-+..-.|......++|++. |..++ +|-..++.
T Consensus 282 ~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~~ 336 (339)
T KOG0280|consen 282 DSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITGE 336 (339)
T ss_pred EecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccCC
Confidence 55432 2 23344567776677777555567888654 66655 88665544
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-08 Score=111.94 Aligned_cols=230 Identities=14% Similarity=0.182 Sum_probs=163.1
Q ss_pred ecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEecc--CC---CC--CeE---EEE-EcC-CCCEEEE
Q psy10114 505 LDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLS--AD---GN--SVT---SVA-WNE-RGNLVAV 572 (819)
Q Consensus 505 Ldap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~--~h---~~--~Vt---sLa-fSp-dG~~LAs 572 (819)
|..+.--.|+|...+.-++..++ -+..|.|+++|..+.+++++ ++. -. .. .+. -+. |++ +|++++.
T Consensus 260 lrrHTnFtdYY~R~~nsDGkrIv-Fq~~GdIylydP~td~lekl-dI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~ 337 (668)
T COG4946 260 LRRHTNFTDYYPRNANSDGKRIV-FQNAGDIYLYDPETDSLEKL-DIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIAL 337 (668)
T ss_pred hhhcCCchhccccccCCCCcEEE-EecCCcEEEeCCCcCcceee-ecCCccccccccccccCHHHhhhhhccCCCcEEEE
Confidence 33444445777777766666655 46778999999999887664 221 11 11 111 111 333 6889988
Q ss_pred EecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCC-eEEEEECCCCCccceEEEecccCCeEEEEECC
Q psy10114 573 GTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDR-MILQRDVRTPNSQSERRLVGHRQEVCGLKWSP 649 (819)
Q Consensus 573 Gs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DG-tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp 649 (819)
.+. |...|.+...+-.++. +|.++|.-..+ +++-++.|..|| .+-++|.++++ ...+...-+.|.+++.++
T Consensus 338 VSR-GkaFi~~~~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e---~kr~e~~lg~I~av~vs~ 411 (668)
T COG4946 338 VSR-GKAFIMRPWDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE---VKRIEKDLGNIEAVKVSP 411 (668)
T ss_pred Eec-CcEEEECCCCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCce---EEEeeCCccceEEEEEcC
Confidence 876 6788877666554442 56677776666 577899999999 89999999865 356667778899999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECCCCceeEEEcCCCCe
Q psy10114 650 DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG-GTADRCIRFWNTLTGQPMQCVDTGSQV 728 (819)
Q Consensus 650 dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~tg~~v~~l~~~s~V 728 (819)
+|+.++.+.....+.+.|+.+++....-+...+-|+.++|+|+++.++.+-- |.....|+++|+.+++........+.-
T Consensus 412 dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~D 491 (668)
T COG4946 412 DGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYD 491 (668)
T ss_pred CCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccc
Confidence 9999999999999999999999876655666788999999999998776531 234568999999988766554433444
Q ss_pred EEEEEccCCCEEEE
Q psy10114 729 CNLAWSKHSSELVS 742 (819)
Q Consensus 729 ~sLafSpdg~~Las 742 (819)
.+-+|.|++++|+.
T Consensus 492 fsPaFD~d~ryLYf 505 (668)
T COG4946 492 FSPAFDPDGRYLYF 505 (668)
T ss_pred cCcccCCCCcEEEE
Confidence 44555566555543
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.4e-07 Score=103.19 Aligned_cols=261 Identities=13% Similarity=0.079 Sum_probs=162.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec----------CceEEEeecCCceEEEEEecCCC-C--
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH----------HGYVQVWDVSVAKQVHKLVGHTA-R-- 599 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~----------DGtI~IWDl~tgk~i~tl~gHs~-~-- 599 (819)
+.|.+.|..+++........ .. -..+ ++|||+.++++.. +..|.+||..+.+.+..+.-... +
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G--~~-P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~ 102 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGG--FL-PNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL 102 (352)
T ss_pred ceEEEEECCCCEEEEEEEcc--CC-Ccee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh
Confidence 88999999998876644432 22 2234 9999998888765 78999999999999988873222 1
Q ss_pred ------eEEEEeCCceeeecc-C-CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC-
Q psy10114 600 ------VGALAWNGDMLSSGS-R-DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS- 670 (819)
Q Consensus 600 ------V~sLawng~~LaSGS-~-DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t- 670 (819)
...++-+|+.|++.. . +..|.+.|+.+++.. ..+.- .+...-...+.++.. +-+.||......+.+
T Consensus 103 ~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv--~ei~v-p~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~ 177 (352)
T TIGR02658 103 VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFV--RMMDV-PDCYHIFPTANDTFF--MHCRDGSLAKVGYGTK 177 (352)
T ss_pred ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEE--EEEeC-CCCcEEEEecCCccE--EEeecCceEEEEecCC
Confidence 334444788777655 3 789999999886632 22221 111111222222211 122344333322221
Q ss_pred Cce-eE---EEecCCCCE-EEEEEcC-CCCeEEEEEccCCCCeEEEEECCCC-----ceeEEEcC--------CCCeEEE
Q psy10114 671 MSP-LQ---TYTEHLAAV-KAIAWSP-HHHGLLASGGGTADRCIRFWNTLTG-----QPMQCVDT--------GSQVCNL 731 (819)
Q Consensus 671 ~~~-i~---t~~~h~~~V-tsLafSP-dg~~LLaSGgGs~DgtIrIWDl~tg-----~~v~~l~~--------~s~V~sL 731 (819)
++. .. .+.....++ ..-.+.+ +|+.++++ ..|+|.+.|+... +....+.. .....-+
T Consensus 178 g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs----~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~i 253 (352)
T TIGR02658 178 GNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPT----YTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQV 253 (352)
T ss_pred CceEEeeeeeecCCccccccCCceEcCCCcEEEEe----cCCeEEEEecCCCcceecceeeeccccccccccCCCcceeE
Confidence 111 11 111100000 0003455 78877776 4599999996543 22222211 1223449
Q ss_pred EEccCCCEEEEE-Ee-------cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEEEe-CCCcEEEEECCCC
Q psy10114 732 AWSKHSSELVST-HG-------YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVTGA-GDETLRFWNVFSK 801 (819)
Q Consensus 732 afSpdg~~Last-sG-------ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaSGS-~DGtIrIWdl~s~ 801 (819)
+++++++.+++. ++ ...+.|.++|..+++.+..+.. ...+.+++++|||+ .|++.. .++.|.+.|..++
T Consensus 254 a~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 254 AYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred EEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence 999999999983 22 1236899999999999998874 34789999999999 877666 5788999999998
Q ss_pred ceeccc
Q psy10114 802 VRSQRE 807 (819)
Q Consensus 802 ~~~~k~ 807 (819)
+.....
T Consensus 333 k~i~~i 338 (352)
T TIGR02658 333 KELSSV 338 (352)
T ss_pred eEEeee
Confidence 766553
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.8e-08 Score=106.31 Aligned_cols=264 Identities=17% Similarity=0.286 Sum_probs=175.4
Q ss_pred EEecCC--e-EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEE-EEecCceEEEeecCCceEEEEEe
Q psy10114 519 VDWSSQ--N-VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA-VGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 519 ldwS~~--~-LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LA-sGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
+.|..+ . +.+...++.|.+|++...+.. +.+....+.+.+++|||||+.+. +..-|-.|.+|.+.+.+.... +
T Consensus 54 ieW~ads~~ilC~~yk~~~vqvwsl~Qpew~--ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~ 130 (447)
T KOG4497|consen 54 IEWKADSCHILCVAYKDPKVQVWSLVQPEWY--CKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-P 130 (447)
T ss_pred eeeeccceeeeeeeeccceEEEEEeecceeE--EEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-c
Confidence 455533 3 445567889999999876654 45666778999999999996555 555688999999987664432 2
Q ss_pred cCCCCeEEEEe--CCceeeeccC------------------------------------CCeEEEEECCCCCccceEEEe
Q psy10114 595 GHTARVGALAW--NGDMLSSGSR------------------------------------DRMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 595 gHs~~V~sLaw--ng~~LaSGS~------------------------------------DGtI~IWDi~t~~~~~v~~l~ 636 (819)
-....+..++| +|.+.+.+++ +..+.+||---.- ..+.
T Consensus 131 ~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Ley----kv~a 206 (447)
T KOG4497|consen 131 HPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEY----KVYA 206 (447)
T ss_pred ccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhh----eeee
Confidence 22233455555 3443333221 2344555532211 1111
Q ss_pred cc-cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce------------------------------------------
Q psy10114 637 GH-RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP------------------------------------------ 673 (819)
Q Consensus 637 gH-~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~------------------------------------------ 673 (819)
-| .-.+..++|+|.++++++|+.|+.+++.+--+.++
T Consensus 207 Ye~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a 286 (447)
T KOG4497|consen 207 YERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEA 286 (447)
T ss_pred eeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcccc
Confidence 22 35688899999999999999999988754211110
Q ss_pred ------------------eEEEe------cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeE
Q psy10114 674 ------------------LQTYT------EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729 (819)
Q Consensus 674 ------------------i~t~~------~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~ 729 (819)
+..++ +....+.-++|++|..++.+ -....-+.+-+||++..+....+....+|.
T Consensus 287 ~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aT-rnd~~PnalW~Wdlq~l~l~avLiQk~pir 365 (447)
T KOG4497|consen 287 HIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAAT-RNDKYPNALWLWDLQNLKLHAVLIQKHPIR 365 (447)
T ss_pred CccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEee-ecCCCCceEEEEechhhhhhhhhhhcccee
Confidence 00001 12234667999999875544 333445679999999888777777788999
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcE
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETL 793 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtI 793 (819)
...|+|....++..+| ...+.+|.......+ ...+..-.|..+.|..+|..++..+.|...
T Consensus 366 af~WdP~~prL~vctg--~srLY~W~psg~~~V-~vP~~GF~i~~l~W~~~g~~i~l~~kDafc 426 (447)
T KOG4497|consen 366 AFEWDPGRPRLVVCTG--KSRLYFWAPSGPRVV-GVPKKGFNIQKLQWLQPGEFIVLCGKDAFC 426 (447)
T ss_pred EEEeCCCCceEEEEcC--CceEEEEcCCCceEE-ecCCCCceeeeEEecCCCcEEEEEcCCceE
Confidence 9999999999998554 456888986543333 333344679999999999999999998643
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.2e-08 Score=107.39 Aligned_cols=270 Identities=16% Similarity=0.090 Sum_probs=173.8
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG 601 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~ 601 (819)
.++.+++++.++.|+.+|..+|+..-...+.. ....+... ++..+++++.+|.+..+|.++|+.+...........
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~--~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~ 139 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDE--RLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLS 139 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCC--CcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeec
Confidence 46788888889999999999998654333332 11122222 467888999999999999999998877654332222
Q ss_pred EEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCC---eEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe
Q psy10114 602 ALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE---VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 602 sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~---VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~ 678 (819)
.....++.++.++.+|.+..+|.++++............. ..+... .+..++.+..+|.+..+|.++++.+.+..
T Consensus 140 ~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~ 217 (377)
T TIGR03300 140 PPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQR 217 (377)
T ss_pred CCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence 2333567788888899999999988764322221111000 001111 23467888889999999999998766543
Q ss_pred cCCC----C---EEEEEEcC--CCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 679 EHLA----A---VKAIAWSP--HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 679 ~h~~----~---VtsLafSP--dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
.... . ...+.-+| .+..+++++ .++.+..+|..+|+.+........ .... .++..+++ +..+|
T Consensus 218 ~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~---~~g~l~a~d~~tG~~~W~~~~~~~-~~p~--~~~~~vyv--~~~~G 289 (377)
T TIGR03300 218 VALPKGRTELERLVDVDGDPVVDGGQVYAVS---YQGRVAALDLRSGRVLWKRDASSY-QGPA--VDDNRLYV--TDADG 289 (377)
T ss_pred cccCCCCCchhhhhccCCccEEECCEEEEEE---cCCEEEEEECCCCcEEEeeccCCc-cCce--EeCCEEEE--ECCCC
Confidence 1100 0 00000011 234455543 689999999999988776653321 2222 34667777 56899
Q ss_pred eEEEEECCCCcEEEEEecCCC-CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 750 QILVWKYPTLTQVAKLTGHSY-RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~gH~~-~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
.+..+|..+++.+.+...... ...+... .+..+++++.||.|+++|..+++...+.
T Consensus 290 ~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~ 346 (377)
T TIGR03300 290 VVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARL 346 (377)
T ss_pred eEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEE
Confidence 999999999988766532222 2222222 4668899999999999999988776443
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.4e-08 Score=115.06 Aligned_cols=217 Identities=17% Similarity=0.164 Sum_probs=140.5
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC-C--CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR-D--RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~-D--GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
.+.++|.+... .+.+..+...+.+..| +|+.|+..+. + ..|.++|+.+++...+ ....+.....+|+|||+
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l---t~~~g~~~~~~wSPDG~ 274 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV---TSFPGINGAPRFSPDGK 274 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe---cCCCCCcCCeeECCCCC
Confidence 56677765433 3455566778888888 5666765543 2 3688899987653322 22223345689999999
Q ss_pred EEEE-EECCCe--EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeE
Q psy10114 653 YLAS-GGNDNR--LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729 (819)
Q Consensus 653 ~LaS-GS~DGt--I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~ 729 (819)
.|+. .+.+|. |+++|+.+++. ..+..+.......+|+|+|+.++.++.......|.++|+.+++.......+....
T Consensus 275 ~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~ 353 (448)
T PRK04792 275 KLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNL 353 (448)
T ss_pred EEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCc
Confidence 8875 455664 88889887764 4455555666788999999998887642223467778888877544332333345
Q ss_pred EEEEccCCCEEEEEEecCCC--eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC-C--cEEEEECCCCc
Q psy10114 730 NLAWSKHSSELVSTHGYSQN--QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD-E--TLRFWNVFSKV 802 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg--~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D-G--tIrIWdl~s~~ 802 (819)
..+|+|||+.++.++ ..++ .|.++|+.+++.. .+... ......+|+|||+.|+..+.+ | .+.+++...+.
T Consensus 354 ~~~~SpDG~~l~~~~-~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~ 428 (448)
T PRK04792 354 GGSITPDGRSMIMVN-RTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRF 428 (448)
T ss_pred CeeECCCCCEEEEEE-ecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence 679999999998864 3334 5666787777543 33322 122345899999988775543 3 36777775443
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-07 Score=106.08 Aligned_cols=233 Identities=12% Similarity=0.103 Sum_probs=154.0
Q ss_pred CCCeEEEEEcCCCceEEEEeccCC-----CCCeEEEEEcCCCCEEEEEe-c-CceEEEeecCCceEEEEEecCCCCeEEE
Q psy10114 531 LGSCVYLWSACTSQVTRLCDLSAD-----GNSVTSVAWNERGNLVAVGT-H-HGYVQVWDVSVAKQVHKLVGHTARVGAL 603 (819)
Q Consensus 531 ~Dg~V~LWd~~tg~~~~l~~l~~h-----~~~VtsLafSpdG~~LAsGs-~-DGtI~IWDl~tgk~i~tl~gHs~~V~sL 603 (819)
.++.|.+||..+.+......+... ......++++|||+++++.. . +..|.+.|+++++.+.++.-.. ...-.
T Consensus 75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy 153 (352)
T TIGR02658 75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIF 153 (352)
T ss_pred CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEE
Confidence 478899999999988765444322 22344789999999999876 3 6899999999999998887422 22222
Q ss_pred EeCCceeeeccCCCeEEEEECCCCCccceEEEe-ccc--CCeEE-EEECC-CCCEEEEEECCCeEEEEECCCC-----ce
Q psy10114 604 AWNGDMLSSGSRDRMILQRDVRTPNSQSERRLV-GHR--QEVCG-LKWSP-DNQYLASGGNDNRLYVWNLHSM-----SP 673 (819)
Q Consensus 604 awng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~-gH~--~~Vts-LafSp-dg~~LaSGS~DGtI~IWDl~t~-----~~ 673 (819)
....+...+-+.||......+............ .+. ..+.. -.+++ +|+.+....+ |+|.+.|+... +.
T Consensus 154 ~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~ 232 (352)
T TIGR02658 154 PTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPA 232 (352)
T ss_pred EecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecce
Confidence 223333333445555444333332211111110 011 00000 03455 7877777666 99999996443 33
Q ss_pred eEEEec-------CCCCEEEEEEcCCCCeEEEEEcc-------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCC-
Q psy10114 674 LQTYTE-------HLAAVKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSS- 738 (819)
Q Consensus 674 i~t~~~-------h~~~VtsLafSPdg~~LLaSGgG-------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~- 738 (819)
...+.. ..+...-++++++++.+++...+ ...+.|.++|..+++.+..+..+..+..++++||++
T Consensus 233 ~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp 312 (352)
T TIGR02658 233 IEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKP 312 (352)
T ss_pred eeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCe
Confidence 333221 23445569999999998885311 122689999999999999999999999999999999
Q ss_pred EEEEEEecCCCeEEEEECCCCcEEEEEe
Q psy10114 739 ELVSTHGYSQNQILVWKYPTLTQVAKLT 766 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s~k~l~sl~ 766 (819)
.++++ ...++.|.++|..+++.+.++.
T Consensus 313 ~lyvt-n~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 313 LLYAL-STGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred EEEEe-CCCCCcEEEEECcCCeEEeeec
Confidence 77765 4467889999999999998883
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.10 E-value=5e-07 Score=100.54 Aligned_cols=255 Identities=18% Similarity=0.160 Sum_probs=167.4
Q ss_pred EecCCeEEEEEC----CCeEEEEEcCC--CceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-CceEEEeecCC-ceEEE
Q psy10114 520 DWSSQNVLSVGL----GSCVYLWSACT--SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSV-AKQVH 591 (819)
Q Consensus 520 dwS~~~LLa~g~----Dg~V~LWd~~t--g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~t-gk~i~ 591 (819)
+.+++.+.++.. ++.|..|+... +++..+............+++++++++|+++.. +|.|.++++.. ++...
T Consensus 45 ~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~ 124 (345)
T PF10282_consen 45 SPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGE 124 (345)
T ss_dssp -TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEE
T ss_pred EeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccce
Confidence 445667777766 46888888765 566666665544567788999999999999874 89999999986 43322
Q ss_pred E---Ee----------cCCCCeEEEEeC--Cceeeec-cCCCeEEEEECCCCCccc--eEEE-ecccCCeEEEEECCCCC
Q psy10114 592 K---LV----------GHTARVGALAWN--GDMLSSG-SRDRMILQRDVRTPNSQS--ERRL-VGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 592 t---l~----------gHs~~V~sLawn--g~~LaSG-S~DGtI~IWDi~t~~~~~--v~~l-~gH~~~VtsLafSpdg~ 652 (819)
. +. .......++.++ ++++++. -....|.+|+++...... ...+ ......-..+.|+|+++
T Consensus 125 ~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~ 204 (345)
T PF10282_consen 125 VVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGK 204 (345)
T ss_dssp EEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSS
T ss_pred eeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcC
Confidence 2 21 123456788884 5655554 345689999998765221 1222 23345678999999999
Q ss_pred EEEEEE-CCCeEEEEECC--CCc--eeEEEecC------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC--CCc--
Q psy10114 653 YLASGG-NDNRLYVWNLH--SMS--PLQTYTEH------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL--TGQ-- 717 (819)
Q Consensus 653 ~LaSGS-~DGtI~IWDl~--t~~--~i~t~~~h------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~--tg~-- 717 (819)
++.+.. .+++|.++++. +++ .++..... ......|+++|+|++++++.. .++.|.+|++. +|+
T Consensus 205 ~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr--~~~sI~vf~~d~~~g~l~ 282 (345)
T PF10282_consen 205 YAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNR--GSNSISVFDLDPATGTLT 282 (345)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEEC--TTTEEEEEEECTTTTTEE
T ss_pred EEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEec--cCCEEEEEEEecCCCceE
Confidence 886655 47789999987 432 22222211 225789999999999999875 58899999983 343
Q ss_pred eeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEEC--CCCcEEEEEe-cCCCCEEEEEE
Q psy10114 718 PMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKY--PTLTQVAKLT-GHSYRVLYLAM 777 (819)
Q Consensus 718 ~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl--~s~k~l~sl~-gH~~~VtsLaf 777 (819)
.+..+.. +.....++++|+|++++++ ...++.|.+|++ .+|.....-. ..-....|+.|
T Consensus 283 ~~~~~~~~G~~Pr~~~~s~~g~~l~Va-~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 283 LVQTVPTGGKFPRHFAFSPDGRYLYVA-NQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEEEEESSSSEEEEEE-TTSSEEEEE-ETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEE-ecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 3334444 5558999999999999986 557788999976 4555443322 22344566655
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.7e-09 Score=119.99 Aligned_cols=187 Identities=18% Similarity=0.230 Sum_probs=152.3
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEecc-CCCCCeEEEEEc--------------------CCCCEEEEEecCceEEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLS-ADGNSVTSVAWN--------------------ERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~-~h~~~VtsLafS--------------------pdG~~LAsGs~DGtI~I 581 (819)
.++++....||.+++|+..++++..-+.-. .-++..++..|. -|...++-|...|.|.+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ 84 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL 84 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence 457888899999999999988765432221 123455565552 13457888999999999
Q ss_pred eecCCceEEEEEe--cCCCCeEEEEeCC--ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE
Q psy10114 582 WDVSVAKQVHKLV--GHTARVGALAWNG--DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG 657 (819)
Q Consensus 582 WDl~tgk~i~tl~--gHs~~V~sLawng--~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG 657 (819)
|++..|+....+. +|.+.|.++.++. ..|.+++.|+.+..|+..... ...........+.+++.+|||+.++++
T Consensus 85 ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~--~~~~~~~~~~~~~sl~is~D~~~l~~a 162 (541)
T KOG4547|consen 85 YSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV--IIRIWKEQKPLVSSLCISPDGKILLTA 162 (541)
T ss_pred EEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce--eeeeeccCCCccceEEEcCCCCEEEec
Confidence 9999999988887 6999999999954 489999999999999998855 456777788889999999999999988
Q ss_pred ECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCC-----CCeEEEEEccCCCCeEEEEECCC
Q psy10114 658 GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH-----HHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 658 S~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPd-----g~~LLaSGgGs~DgtIrIWDl~t 715 (819)
+ ++|++||+++++.+..|.+|.++|.+++|... |.+++.+.. .+.-+.+|-+..
T Consensus 163 s--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~--~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 163 S--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAA--AERGITVWVVEK 221 (541)
T ss_pred c--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccc--cccceeEEEEEc
Confidence 7 58999999999999999999999999999887 788888766 566677776544
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-09 Score=113.43 Aligned_cols=277 Identities=21% Similarity=0.320 Sum_probs=185.4
Q ss_pred EEEEecCCeEEEEECCCeEEEEEcC-CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC----CceEEE
Q psy10114 517 NLVDWSSQNVLSVGLGSCVYLWSAC-TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS----VAKQVH 591 (819)
Q Consensus 517 ~~ldwS~~~LLa~g~Dg~V~LWd~~-tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~----tgk~i~ 591 (819)
..+-.-...+++++.|.++++|--. .++.-+.. ......+++++++.++...|++|-.+|++.-+.+. +....+
T Consensus 30 ~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI-~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r 108 (404)
T KOG1409|consen 30 AILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSI-YHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLK 108 (404)
T ss_pred heeccCCCCeEEccccceeeeEEeccccccCchh-hhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhh
Confidence 3333445689999999999999643 33322211 11235789999999999999999999999888653 334455
Q ss_pred EEecCCCCeEEEEeC--CceeeeccCCCeEE---------------------------------------EEECCCCCcc
Q psy10114 592 KLVGHTARVGALAWN--GDMLSSGSRDRMIL---------------------------------------QRDVRTPNSQ 630 (819)
Q Consensus 592 tl~gHs~~V~sLawn--g~~LaSGS~DGtI~---------------------------------------IWDi~t~~~~ 630 (819)
....|..+|..+-|+ ...+++.+.|..+. .-.+......
T Consensus 109 ~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~ 188 (404)
T KOG1409|consen 109 DYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQ 188 (404)
T ss_pred hhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCc
Confidence 556677777777663 34555555544332 2222222344
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
.+.++.+|.+.+.+++|.+..+.+.+|..|..+.+||+-..+ ......+|...|..+..-+.-+.+++++ .||.|.
T Consensus 189 ~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~---edg~i~ 265 (404)
T KOG1409|consen 189 LITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCG---EDGGIV 265 (404)
T ss_pred eEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeecc---CCCeEE
Confidence 567788999999999999999999999999999999996544 3456778999999998888888777765 799999
Q ss_pred EEECCCCceeEE---------------------------E--------cCCCCeEEEEEccCCCEEEEEEecCCCeEEEE
Q psy10114 710 FWNTLTGQPMQC---------------------------V--------DTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 710 IWDl~tg~~v~~---------------------------l--------~~~s~V~sLafSpdg~~LastsGssDg~I~IW 754 (819)
+||++....... + ..+..++..+-+....+... |. .-.+++-
T Consensus 266 ~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~m--g~-e~~vR~~ 342 (404)
T KOG1409|consen 266 VWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTM--GF-EFSVRVC 342 (404)
T ss_pred EEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccc--cc-eeEEEEe
Confidence 999875432110 0 01233333333322222222 21 2344444
Q ss_pred ECC-------CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 755 KYP-------TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 755 Dl~-------s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
|.- +..+++....-...|+++.+..+-..|+|++.|..|+|||+.+
T Consensus 343 ~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 343 DSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence 421 1233444433345689999988888999999999999999864
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.1e-08 Score=109.80 Aligned_cols=258 Identities=16% Similarity=0.106 Sum_probs=167.2
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCe-
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV- 600 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V- 600 (819)
+++.++.++.++.++.+|..+|+..-...+. +.+.+.... .+..+++++.+|.+..+|.++|+.+.+........
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~---~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~ 179 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLS---SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALT 179 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccC---ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCcee
Confidence 4677888889999999999999875433332 222221111 35578888889999999999999887776433221
Q ss_pred ----EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEeccc--CC---eEEEEECC--CCCEEEEEECCCeEEEEECC
Q psy10114 601 ----GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR--QE---VCGLKWSP--DNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 601 ----~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~--~~---VtsLafSp--dg~~LaSGS~DGtI~IWDl~ 669 (819)
.+....++.++.++.+|.+..+|.++++.........-. .. ...+.-+| .+..+++++.+|.+..+|.+
T Consensus 180 ~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~ 259 (377)
T TIGR03300 180 LRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLR 259 (377)
T ss_pred ecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECC
Confidence 122233457788888999999999887643222111000 00 00011111 35678888899999999999
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCC-CeEEEEEccCCCEEEEEEecC
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGS-QVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s-~V~sLafSpdg~~LastsGss 747 (819)
+++.+...... ....... .+..+++.. .||.+..+|..+|+.+.... ... ...+... .+..+++ ++.
T Consensus 260 tG~~~W~~~~~--~~~~p~~--~~~~vyv~~---~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~--~~~ 328 (377)
T TIGR03300 260 SGRVLWKRDAS--SYQGPAV--DDNRLYVTD---ADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVV--GDF 328 (377)
T ss_pred CCcEEEeeccC--CccCceE--eCCEEEEEC---CCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEE--EeC
Confidence 99887766521 1122222 344455543 69999999999998876652 222 2222222 4567777 778
Q ss_pred CCeEEEEECCCCcEEEEEecCCCCEEE-EEEecCCCEEEEEeCCCcEEEE
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYRVLY-LAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~Vts-LafSpDG~~LaSGS~DGtIrIW 796 (819)
+|.+.++|..+++.+.++..+...+.. .++. ++ .|+.++.||.|..+
T Consensus 329 ~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 329 EGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLVQTRDGDLYAF 376 (377)
T ss_pred CCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEEEeCCceEEEe
Confidence 999999999999999988866654333 3333 33 58889999999865
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-08 Score=115.38 Aligned_cols=187 Identities=18% Similarity=0.225 Sum_probs=153.3
Q ss_pred CCCCEEEEEecCceEEEeecCCceEEEEEec---CCCCeEEEEeC----------------------CceeeeccCCCeE
Q psy10114 565 ERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG---HTARVGALAWN----------------------GDMLSSGSRDRMI 619 (819)
Q Consensus 565 pdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g---Hs~~V~sLawn----------------------g~~LaSGS~DGtI 619 (819)
+.+.++|..+.||.++|||..+++....+.. -++...+..|. ...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 4567999999999999999999887776652 24455555551 1257788889999
Q ss_pred EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEE
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLAS 699 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaS 699 (819)
.++++..++......-..|.+.|.++.++.+-..|.+++.|+.+..|+....+.++.+++.+..+.+++.+|||+.+++
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~- 161 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT- 161 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe-
Confidence 9999999886555555789999999999999999999999999999999999999999999999999999999886554
Q ss_pred EccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccC-----CCEEEEEEecCCCeEEEEECC
Q psy10114 700 GGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKH-----SSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 700 GgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpd-----g~~LastsGssDg~I~IWDl~ 757 (819)
..++|++||+++++.+..+ .|.+.|.++.|-.+ |.++.+.. ..+..+.+|-..
T Consensus 162 ----as~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa-~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 162 ----ASRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSA-AAERGITVWVVE 220 (541)
T ss_pred ----ccceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecc-ccccceeEEEEE
Confidence 3589999999999999998 46788999999887 77877753 334556677654
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.2e-07 Score=99.74 Aligned_cols=267 Identities=12% Similarity=0.169 Sum_probs=180.9
Q ss_pred CCeEEEEEcCC--CceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---ceEEEeecCC--ceEEE--EEecCCCCeEE
Q psy10114 532 GSCVYLWSACT--SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---GYVQVWDVSV--AKQVH--KLVGHTARVGA 602 (819)
Q Consensus 532 Dg~V~LWd~~t--g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---GtI~IWDl~t--gk~i~--tl~gHs~~V~s 602 (819)
+..|++|++.+ ++...+ .+-.+.+..+-++|++++++|.++..+ |.|.-|.++. |+... .......+-+.
T Consensus 15 s~gI~v~~ld~~~g~l~~~-~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~y 93 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLL-QLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCY 93 (346)
T ss_pred CCceEEEEEeCcccccchh-hhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeE
Confidence 57799998863 333322 333456788999999999999988654 7788877764 44322 11122222256
Q ss_pred EEe--CCceeeecc-CCCeEEEEECCC-CCccceEEEecccCC----------eEEEEECCCCCEEEEEEC-CCeEEEEE
Q psy10114 603 LAW--NGDMLSSGS-RDRMILQRDVRT-PNSQSERRLVGHRQE----------VCGLKWSPDNQYLASGGN-DNRLYVWN 667 (819)
Q Consensus 603 Law--ng~~LaSGS-~DGtI~IWDi~t-~~~~~v~~l~gH~~~----------VtsLafSpdg~~LaSGS~-DGtI~IWD 667 (819)
++. ++++++++. ..|.|.++-++. +..........|.+. +....+.|+++++++..- -..|.+|+
T Consensus 94 vsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~ 173 (346)
T COG2706 94 VSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYD 173 (346)
T ss_pred EEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEE
Confidence 666 566777765 458899999866 333333334445544 888999999999988754 23799999
Q ss_pred CCCCceeEEEe---cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC--c--eeEEE-------cCCCCeEEEEE
Q psy10114 668 LHSMSPLQTYT---EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG--Q--PMQCV-------DTGSQVCNLAW 733 (819)
Q Consensus 668 l~t~~~i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg--~--~v~~l-------~~~s~V~sLaf 733 (819)
+..++....-. ...+.-+.|+|+|+++...+..- -+++|.+|..... + .++.+ ........+..
T Consensus 174 ~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~E--L~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhi 251 (346)
T COG2706 174 LDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNE--LNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHI 251 (346)
T ss_pred cccCccccccccccCCCCCcceEEEcCCCcEEEEEec--cCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEE
Confidence 98776422111 23455689999999998888765 8999999998873 2 22322 23456788999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCC-cEEEEE---ecCCCCEEEEEEecCCCEEEEEeCC-CcEEEEECCCCc
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTL-TQVAKL---TGHSYRVLYLAMSPDGEAIVTGAGD-ETLRFWNVFSKV 802 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~-k~l~sl---~gH~~~VtsLafSpDG~~LaSGS~D-GtIrIWdl~s~~ 802 (819)
++||++|++.. .....|.+|.+... ..+... ..+........|+++|++|+++..| ..|.+|.++...
T Consensus 252 s~dGrFLYasN-Rg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~T 324 (346)
T COG2706 252 SPDGRFLYASN-RGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKET 324 (346)
T ss_pred CCCCCEEEEec-CCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCC
Confidence 99999999963 33458888887632 222222 2333447889999999999988775 478999887544
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.9e-09 Score=115.94 Aligned_cols=187 Identities=16% Similarity=0.315 Sum_probs=147.2
Q ss_pred EEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEE----EecccC---
Q psy10114 570 VAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERR----LVGHRQ--- 640 (819)
Q Consensus 570 LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~----l~gH~~--- 640 (819)
|.+++....|.-.+++.|+.+..+....+.++++..+ ..+|++|+.+|.|-.||.+......... ...|.+
T Consensus 148 ly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~ 227 (703)
T KOG2321|consen 148 LYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDA 227 (703)
T ss_pred EEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccc
Confidence 4444444568888999999999999888999999996 4588889999999999999865322111 122333
Q ss_pred --CeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe-cCCCCEEEEEEcCCC-CeEEEEEccCCCCeEEEEECCCC
Q psy10114 641 --EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPHH-HGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 641 --~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~-~h~~~VtsLafSPdg-~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
.|++++|+.+|-.+++|+.+|.|.|||+++.+++..-. +..-+|..+.|.+.+ ...+++. ....+++||-.+|
T Consensus 228 ~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~---Dk~~~kiWd~~~G 304 (703)
T KOG2321|consen 228 APSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM---DKRILKIWDECTG 304 (703)
T ss_pred cCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec---chHHhhhcccccC
Confidence 49999999999999999999999999999999876543 235678999997752 2234443 5678999999999
Q ss_pred ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 717 QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 717 ~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
+....+.....+..+|+-|++..+++ +..++.+..|-++...+
T Consensus 305 k~~asiEpt~~lND~C~~p~sGm~f~--Ane~~~m~~yyiP~LGP 347 (703)
T KOG2321|consen 305 KPMASIEPTSDLNDFCFVPGSGMFFT--ANESSKMHTYYIPSLGP 347 (703)
T ss_pred CceeeccccCCcCceeeecCCceEEE--ecCCCcceeEEccccCC
Confidence 99999988888999999999999998 77788888887776544
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.7e-08 Score=112.86 Aligned_cols=200 Identities=17% Similarity=0.213 Sum_probs=132.8
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-Cc----eEEEeecCCc---eEEEEEecCCCCeEEEE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HG----YVQVWDVSVA---KQVHKLVGHTARVGALA 604 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DG----tI~IWDl~tg---k~i~tl~gHs~~V~sLa 604 (819)
..|++.++.+++..++..+.+ .....+|||||+.||..+. +| .+.+|++..+ +..+...++.+.....+
T Consensus 211 ~~I~~~~l~~g~~~~lt~~~g---~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~ 287 (428)
T PRK01029 211 PKIFLGSLENPAGKKILALQG---NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPS 287 (428)
T ss_pred ceEEEEECCCCCceEeecCCC---CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeE
Confidence 468999999998777666543 3456899999998887653 23 3455777653 32333333333445677
Q ss_pred e--CCceeeecc-CCCeEEEE--ECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC---CeEEEEECCCCceeEE
Q psy10114 605 W--NGDMLSSGS-RDRMILQR--DVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND---NRLYVWNLHSMSPLQT 676 (819)
Q Consensus 605 w--ng~~LaSGS-~DGtI~IW--Di~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D---GtI~IWDl~t~~~i~t 676 (819)
| +|+.|+..+ .+|...+| ++..... ....+..+...+....|+|||+.|+..+.+ ..|.+||+.+++.. .
T Consensus 288 wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~-~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~ 365 (428)
T PRK01029 288 FSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ-SPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-Q 365 (428)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECccccc-ceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-E
Confidence 8 566666544 56655555 4432221 224444455667789999999999877653 36999999888764 3
Q ss_pred EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCC
Q psy10114 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHS 737 (819)
Q Consensus 677 ~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg 737 (819)
+......+....|+|+|+.++.++....+..|.++|+.+++..........+...+|+|-.
T Consensus 366 Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 366 LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAFP 426 (428)
T ss_pred ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCCC
Confidence 4333456778999999998887764334567999999888766555555667778888754
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.4e-08 Score=107.18 Aligned_cols=281 Identities=14% Similarity=0.145 Sum_probs=193.2
Q ss_pred CcceEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc-------------
Q psy10114 512 DDFYLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG------------- 577 (819)
Q Consensus 512 dDfyv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG------------- 577 (819)
.++.+..+.||+. ..++......|.+|...... ++..+. ...|..+.|+|.+++|.+=+..+
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~--~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~ 106 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKA--KLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTS 106 (561)
T ss_pred cCcchhheeecCcchheehhhccceEEccccchh--heeeee--cCCceecccCcccceeeeeccCCccChhhccCCccc
Confidence 4566777788864 45555666779999987765 233343 35799999999999999865433
Q ss_pred --eEEEeecCCceEEEEEecCCCC--eE-EEEe--CCceeeeccCCCeEEEEECCCCCcc--ceEEEecccCCeEEEEEC
Q psy10114 578 --YVQVWDVSVAKQVHKLVGHTAR--VG-ALAW--NGDMLSSGSRDRMILQRDVRTPNSQ--SERRLVGHRQEVCGLKWS 648 (819)
Q Consensus 578 --tI~IWDl~tgk~i~tl~gHs~~--V~-sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~--~v~~l~gH~~~VtsLafS 648 (819)
.+.+||+.+|..+..+.+...+ .. -+.| +..+++-. ....+.++++ ++... ....+. ...|....|+
T Consensus 107 ~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr--~~gi~dFsis 182 (561)
T COG5354 107 KNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR--PVGILDFSIS 182 (561)
T ss_pred cCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhcc--ccceeeEEec
Confidence 4999999999999999876665 33 4455 45544433 3457889997 33321 111121 3678889999
Q ss_pred CCC--CEEEE-----EECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc--------CCCCeEEEEEC
Q psy10114 649 PDN--QYLAS-----GGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG--------TADRCIRFWNT 713 (819)
Q Consensus 649 pdg--~~LaS-----GS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG--------s~DgtIrIWDl 713 (819)
|.+ ..||. ++.++++++|.+..++.+.+-.-.+..-..+.|.+.|+++++-.-. ....++.++++
T Consensus 183 P~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~ 262 (561)
T COG5354 183 PEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRI 262 (561)
T ss_pred CCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEee
Confidence 964 34554 4567899999998777665544333444578899999987764320 01356888888
Q ss_pred CCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC---
Q psy10114 714 LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD--- 790 (819)
Q Consensus 714 ~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D--- 790 (819)
.....-...+..++|...+|.|.++.+++++|..+..+.++|++.. ... ......=..+.|||.+++++.++-|
T Consensus 263 ~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~--~~Pe~~rNT~~fsp~~r~il~agF~nl~ 339 (561)
T COG5354 263 TERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRF--YFPEQKRNTIFFSPHERYILFAGFDNLQ 339 (561)
T ss_pred cccccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEE--ecCCcccccccccCcccEEEEecCCccc
Confidence 7544434446688999999999999999999999999999998765 322 2233444567788888888776654
Q ss_pred CcEEEEECCCCce
Q psy10114 791 ETLRFWNVFSKVR 803 (819)
Q Consensus 791 GtIrIWdl~s~~~ 803 (819)
|.+-+||..+...
T Consensus 340 gni~i~~~~~rf~ 352 (561)
T COG5354 340 GNIEIFDPAGRFK 352 (561)
T ss_pred cceEEeccCCceE
Confidence 5677777765543
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.4e-09 Score=123.18 Aligned_cols=281 Identities=19% Similarity=0.292 Sum_probs=191.7
Q ss_pred EEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC--CEEEEEecCceEEEeecCCc---eEEE
Q psy10114 517 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG--NLVAVGTHHGYVQVWDVSVA---KQVH 591 (819)
Q Consensus 517 ~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG--~~LAsGs~DGtI~IWDl~tg---k~i~ 591 (819)
.++..++..++.++.-| +++-|+...-.....-..-..-.|-.+.|++.. .+-++......-.+|++... ....
T Consensus 30 ~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef 108 (1081)
T KOG0309|consen 30 VSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEF 108 (1081)
T ss_pred eeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCCccceEE
Confidence 34445566666555544 345555432111111111112346677888743 34455555556678998632 3444
Q ss_pred EEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 592 KLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 592 tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
.+.+|+..|+.+.|+ ++.+++++.|-.+..||++++.. .+.....-...-..++|+-....+.+.+..+.|++||.
T Consensus 109 ~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~-p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~ 187 (1081)
T KOG0309|consen 109 VLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR-PFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDL 187 (1081)
T ss_pred EEecCccceeccccCCCCCcceeeccccccceeeeccCCCc-ceeeeecccccCceeeecccCcchhhhccCCceEEEec
Confidence 567999999999994 66999999999999999999874 34444444556678999986656666677788999999
Q ss_pred CCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC--ceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 669 HSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG--QPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 669 ~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg--~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
+.| .++..+++|...|..++|...-...+.+++ .|++|++||.... +....+.+..++..-.+-|-|+-.++.-.
T Consensus 188 r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~--~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~ 265 (1081)
T KOG0309|consen 188 RKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSS--NDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPM 265 (1081)
T ss_pred cCCCcceEEecccceeeehHHHhhhhhhhhcccC--CCCceeeecccccccccceeccccCcceeccccccCceeEeccc
Confidence 866 578889999999999999876655666655 8999999998754 34455566778888888887665444222
Q ss_pred cCCCeEEEEEC---------C-CCcEEEEEecCCCCEEEEEEecCC----------CEEEEEeCCCcEEEEECCCC
Q psy10114 746 YSQNQILVWKY---------P-TLTQVAKLTGHSYRVLYLAMSPDG----------EAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 746 ssDg~I~IWDl---------~-s~k~l~sl~gH~~~VtsLafSpDG----------~~LaSGS~DGtIrIWdl~s~ 801 (819)
-.++.+.+++. . ..+++..+.||++.|....|-..+ -.|+|=+.|.++|+|-+.+.
T Consensus 266 ~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 266 VGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDSQ 341 (1081)
T ss_pred cCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccHH
Confidence 12234444433 2 346789999999998877664322 27999999999999999763
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.4e-08 Score=113.43 Aligned_cols=271 Identities=17% Similarity=0.269 Sum_probs=192.3
Q ss_pred cCCcceEEEEEec--CCeEEEEECCCeEEEEEcCCCc-------------eEEEEeccCCCCCeEEEEEcCCCCEEEEEe
Q psy10114 510 LQDDFYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQ-------------VTRLCDLSADGNSVTSVAWNERGNLVAVGT 574 (819)
Q Consensus 510 l~dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~-------------~~~l~~l~~h~~~VtsLafSpdG~~LAsGs 574 (819)
+.+..-+++++|+ +++++.||.||.+++-.+.+.. +..-+.+.+|++.|.-+.|+.+.+.|-+..
T Consensus 11 iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 11 IPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred CCCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC
Confidence 4456678899999 4689999999999999875532 111145789999999999999999999999
Q ss_pred cCceEEEeecCCceEEEEEe--cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 575 HHGYVQVWDVSVAKQVHKLV--GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 575 ~DGtI~IWDl~tgk~i~tl~--gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
.+|.|.+|-+-+|.-...+. ...+-|.+++| +|..++..-.||.|.+=.++.+.. .-+.+++ .....+.|++|
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRI-wgKeLkg--~~l~hv~ws~D 167 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRI-WGKELKG--QLLAHVLWSED 167 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecccee-cchhcch--heccceeeccc
Confidence 99999999988776544333 34567889999 588888888999988877765431 1122222 23457889999
Q ss_pred CCEEEEEECCCeEEEEECCCCc-------eeE----EEecCCCCEEEEEEc--------CCCCeEEEEEccCCCCeEEEE
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMS-------PLQ----TYTEHLAAVKAIAWS--------PHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~-------~i~----t~~~h~~~VtsLafS--------Pdg~~LLaSGgGs~DgtIrIW 711 (819)
.+.++.+-..|.+.++|.+..- +.- .+......|-.+.|. |+...++++- .+|.+.+-
T Consensus 168 ~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy---~nGr~QiM 244 (1189)
T KOG2041|consen 168 LEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCY---ANGRMQIM 244 (1189)
T ss_pred HHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEE---cCceehhh
Confidence 9999988889999999975431 111 112223335556663 4556555543 57887776
Q ss_pred ECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC------C-CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEE
Q psy10114 712 NTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS------Q-NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAI 784 (819)
Q Consensus 712 Dl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss------D-g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~L 784 (819)
.-.+...-..++++-.+....|+++|..+++++... | +.|.++. +-|+.+.+++.....|++++|-..|-.+
T Consensus 245 R~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLri 323 (1189)
T KOG2041|consen 245 RSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLRI 323 (1189)
T ss_pred hhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceeeeeEEcCCceEE
Confidence 655555555667788899999999999999863211 1 2455554 5678888888888889999997766555
Q ss_pred EEE
Q psy10114 785 VTG 787 (819)
Q Consensus 785 aSG 787 (819)
+.+
T Consensus 324 A~A 326 (1189)
T KOG2041|consen 324 AIA 326 (1189)
T ss_pred EEE
Confidence 543
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-08 Score=110.46 Aligned_cols=208 Identities=15% Similarity=0.218 Sum_probs=153.1
Q ss_pred EEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC----CccceEEE-ecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 591 HKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP----NSQSERRL-VGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~----~~~~v~~l-~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
+.+.+|.+.|.++.| ++..|++|+.|..+++|.+... ..+++... ..|...|.|++|....+.+.+|+.+++|
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 345689999999999 5779999999999999998642 11222222 3466899999999999999999999999
Q ss_pred EEEECCCCceeEEEec--CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc----eeEEEcCCCCeEEEEEccCC
Q psy10114 664 YVWNLHSMSPLQTYTE--HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ----PMQCVDTGSQVCNLAWSKHS 737 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~----~v~~l~~~s~V~sLafSpdg 737 (819)
...|+++.+.+..+.. ..+.|..+..+|..+.++++. .++.|.+||.+..+ ++.....+.....+.|+|..
T Consensus 130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t---~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~ 206 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVT---RAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET 206 (609)
T ss_pred EeeecccceeeeeecccCcccceeecccCCCCceEEEEe---cCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence 9999999988887753 346899999999977665553 79999999998754 33333556778899999988
Q ss_pred CEEEEEEecCCCeEEEEECCCCcE-EEE------EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 738 SELVSTHGYSQNQILVWKYPTLTQ-VAK------LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 738 ~~LastsGssDg~I~IWDl~s~k~-l~s------l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
..|+.+ ..+.+.+-+||.+.... +.. +......-.++.|+|+|..+.+--.-..-.+||+.+..
T Consensus 207 P~Li~~-~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R 277 (609)
T KOG4227|consen 207 PALILV-NSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQR 277 (609)
T ss_pred ceeEEe-ccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeeccc
Confidence 877776 56778899999874322 111 11112223567899999888765554444556665533
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-09 Score=132.22 Aligned_cols=184 Identities=17% Similarity=0.289 Sum_probs=152.7
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGAL 603 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sL 603 (819)
...++|+.||.|++|....++..-..+..+. ..|+.+.|+.+|+.+.++..||.+.+|.+. .+.....+.|.....++
T Consensus 2221 ~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df 2298 (2439)
T KOG1064|consen 2221 PYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDF 2298 (2439)
T ss_pred ceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccce
Confidence 4789999999999999988887666665555 899999999999999999999999999987 67777888999999999
Q ss_pred EeCCceeeecc---CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC
Q psy10114 604 AWNGDMLSSGS---RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 604 awng~~LaSGS---~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h 680 (819)
.|=+..+++++ .++.+.+||.-.+....... ..|.+.++++++-|..+.|++||.+|.|++||++..+.++.++.
T Consensus 2299 ~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~- 2376 (2439)
T KOG1064|consen 2299 RFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA- 2376 (2439)
T ss_pred eeeehhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-
Confidence 99777777765 57899999976554433333 88999999999999999999999999999999998888777654
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
++ .+..+++|+ ..|.++||++..-..+..+.
T Consensus 2377 --------~~--~~~~f~~~s--s~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2377 --------LD--TREYFVTGS--SEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred --------hh--hhheeeccC--cccceEEEEccccchhhcCc
Confidence 33 334566654 89999999998776666554
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.3e-08 Score=119.38 Aligned_cols=258 Identities=17% Similarity=0.217 Sum_probs=177.5
Q ss_pred EEEECCCeEEEEEcCCCceEEEE----eccCC--CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 527 LSVGLGSCVYLWSACTSQVTRLC----DLSAD--GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~~~~l~----~l~~h--~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
+.++.+-.|.++|...+....-+ -+..| ++.+.. .+.+++++..-+.+..=+.. .+....+..+...
T Consensus 20 llag~gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~l-----~~~~~v~~~~~~~v~~~~~~-~~~~~~~s~wi~g- 92 (967)
T KOG0974|consen 20 LLAGSGPEILVYDLSSGCLIRHLIQSKILEVHRGEGKVKL-----LSGKIVTCAKSDEVYVKEAS-NQIIERFSDWIFG- 92 (967)
T ss_pred eeecCCCceEEeeCCchhHhhhhhhhccccccccccccee-----ccceEEEEEeecceeecchh-hhhhhhccccccc-
Confidence 34567778999999887543211 11222 011111 13344555443333332221 1222222222222
Q ss_pred EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCC-----eEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 601 GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE-----VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 601 ~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~-----VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
..+.|....++.++.+..+.+||....... ... .+... ..-+-++++.-++++|+.-+.|.+|+....+.-.
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~--~~i-~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~ 169 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVL--SKI-QSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPI 169 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCcee--hhc-CCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcc
Confidence 345556778888999999999998765421 111 12111 2223456677789999999999999987444444
Q ss_pred EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE--EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ--CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 676 t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~--~l~~~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
.+.+|.+.+.++.++-+|.+++..+ .|+++|+|++.+++... .+.|...+..++|.|+ .+++ ++.|.+.++
T Consensus 170 ~l~GHeG~iF~i~~s~dg~~i~s~S---dDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t--~gedctcrv 242 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGRYIASVS---DDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIIT--VGEDCTCRV 242 (967)
T ss_pred eecccCCceEEEEEccCCcEEEEEe---cCcceeeeecccccccCcccccccceeEEEEeccc--eeEE--eccceEEEE
Confidence 6889999999999999999776654 89999999999988765 4578889999999999 7777 779999999
Q ss_pred EECCCCcEEEEEecCCC-CEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 754 WKYPTLTQVAKLTGHSY-RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 754 WDl~s~k~l~sl~gH~~-~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
|+. +++++..+.+|.+ .+..++..++...++|++.||.+++|++....
T Consensus 243 W~~-~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~ 291 (967)
T KOG0974|consen 243 WGV-NGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRG 291 (967)
T ss_pred Eec-ccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhccc
Confidence 965 4566668888854 58999999999999999999999999987643
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.9e-07 Score=100.90 Aligned_cols=263 Identities=14% Similarity=0.224 Sum_probs=174.5
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeE-EEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec-CCCCeEEEEeCC--
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVT-SVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG-HTARVGALAWNG-- 607 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~Vt-sLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g-Hs~~V~sLawng-- 607 (819)
++.+.+||..+|.+.............. -+.|+.+.+++|--.. ..+.|+++...-....+.. ....+...+|++
T Consensus 107 ~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~-~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~ 185 (561)
T COG5354 107 KNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG-SSLYIHEITDNIEEHPFKNLRPVGILDFSISPEG 185 (561)
T ss_pred cCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc-CeEEEEecCCccccCchhhccccceeeEEecCCC
Confidence 3469999999998876443332222244 6789998887775533 4699999722211111111 134566666632
Q ss_pred --ceee-----eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-----------CCCeEEEEECC
Q psy10114 608 --DMLS-----SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-----------NDNRLYVWNLH 669 (819)
Q Consensus 608 --~~La-----SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-----------~DGtI~IWDl~ 669 (819)
+.|+ .++.++.+++|.+..+.......+. ...=+.+.|.+.|+++++-- ....+++++++
T Consensus 186 n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf--k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~ 263 (561)
T COG5354 186 NHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF--KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT 263 (561)
T ss_pred CCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE--eecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence 2333 2567888999998755433222222 23346789999998776422 12468888887
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE-ecCC
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-GYSQ 748 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts-GssD 748 (819)
... +....+-.++|...+|.|+++.+.+.. |..+..+.++|++.. +........-..+.|+|.+++++.++ +...
T Consensus 264 e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~-g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~ 339 (561)
T COG5354 264 ERS-IPVEKDLKDPVHDFTWEPLSSRFAVIS-GYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHERYILFAGFDNLQ 339 (561)
T ss_pred ccc-cceeccccccceeeeecccCCceeEEe-cccccceeecccccc--eEEecCCcccccccccCcccEEEEecCCccc
Confidence 433 333335689999999999999887766 468999999999876 44444455567788999999988852 3456
Q ss_pred CeEEEEECCCCcEEE-EEecCCCCEEEEEEecCCCEEEEEeC------CCcEEEEECCCCce
Q psy10114 749 NQILVWKYPTLTQVA-KLTGHSYRVLYLAMSPDGEAIVTGAG------DETLRFWNVFSKVR 803 (819)
Q Consensus 749 g~I~IWDl~s~k~l~-sl~gH~~~VtsLafSpDG~~LaSGS~------DGtIrIWdl~s~~~ 803 (819)
|.+.+||......+. .+.+.. ...+.|+|||+++.+... |..+.+||+...+.
T Consensus 340 gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~ 399 (561)
T COG5354 340 GNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKV 399 (561)
T ss_pred cceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEecCchh
Confidence 889999987655544 555443 455789999999887643 78899999977553
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=3e-08 Score=118.53 Aligned_cols=219 Identities=21% Similarity=0.291 Sum_probs=159.9
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeE-
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG- 601 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~- 601 (819)
+..+++++.-+.+..=+........ -.+.|....+..+...++.++.+..+.+||...+......... .++.
T Consensus 61 ~~~~v~~~~~~~v~~~~~~~~~~~~------~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~-er~~l 133 (967)
T KOG0974|consen 61 SGKIVTCAKSDEVYVKEASNQIIER------FSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSD-ERCTL 133 (967)
T ss_pred cceEEEEEeecceeecchhhhhhhh------ccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCC-ceEEE
Confidence 4455666555555444433222111 1344555566667789999999999999999877766655432 2221
Q ss_pred --EEEe----CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 602 --ALAW----NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 602 --sLaw----ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
++-+ +.=++++|+.-+.|.+|+....+ .. ..+.+|.+.|..+.|+-||+++++.|+|.++++|++++.+...
T Consensus 134 ~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn-~p-~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~ 211 (967)
T KOG0974|consen 134 YSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN-KP-IRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG 211 (967)
T ss_pred EeEEEEeccCcEEEEEeccccccEEEEeccccC-Cc-ceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC
Confidence 1222 33388999999999999998433 22 3689999999999999999999999999999999999988765
Q ss_pred -EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 676 -TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 676 -t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
..-+|.+.|.+++|.|+ .+++++ .|.+.++|+.. +..+..+. .+..+..++..++....++ +..|+.++
T Consensus 212 ~~~fgHsaRvw~~~~~~n---~i~t~g--edctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT--~g~Ds~lk 283 (967)
T KOG0974|consen 212 CTGFGHSARVWACCFLPN---RIITVG--EDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVT--GGNDSTLK 283 (967)
T ss_pred cccccccceeEEEEeccc---eeEEec--cceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEe--eccCcchh
Confidence 55589999999999998 344544 89999999754 33344442 3567899999888777777 88999999
Q ss_pred EEECCC
Q psy10114 753 VWKYPT 758 (819)
Q Consensus 753 IWDl~s 758 (819)
+||+..
T Consensus 284 ~~~l~~ 289 (967)
T KOG0974|consen 284 LWDLNG 289 (967)
T ss_pred hhhhhc
Confidence 999753
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.2e-07 Score=111.97 Aligned_cols=236 Identities=14% Similarity=0.195 Sum_probs=157.8
Q ss_pred EEEEEcCC-CCEEEEEecCceEEEeecCCceEEEEEec--CC------------CCeEEEEeC--Cceeeec-cCCCeEE
Q psy10114 559 TSVAWNER-GNLVAVGTHHGYVQVWDVSVAKQVHKLVG--HT------------ARVGALAWN--GDMLSSG-SRDRMIL 620 (819)
Q Consensus 559 tsLafSpd-G~~LAsGs~DGtI~IWDl~tgk~i~tl~g--Hs------------~~V~sLawn--g~~LaSG-S~DGtI~ 620 (819)
..++++++ |..+++-+.++.|+++|.. ++.+..+.+ .. ..-..++++ ++.|+++ ..++.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 45788875 5566666778889999975 444444432 11 123567774 5555444 4567889
Q ss_pred EEECCCCCccceEEEecc-----------------cCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEEEecC--
Q psy10114 621 QRDVRTPNSQSERRLVGH-----------------RQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEH-- 680 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH-----------------~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h-- 680 (819)
.+|..++.. .++.+- -....+++++| ++..+++.+.++.|++||..++... .+.+.
T Consensus 650 ~id~~~~~V---~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~ 725 (1057)
T PLN02919 650 EIDFVNETV---RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGY 725 (1057)
T ss_pred EEecCCCEE---EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCc
Confidence 999876432 222110 11346799999 5666677778899999998776532 22111
Q ss_pred -------------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--------------C--------C
Q psy10114 681 -------------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--------------T--------G 725 (819)
Q Consensus 681 -------------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--------------~--------~ 725 (819)
-.....++++|++..++++.. .++.|++||+.++....... . .
T Consensus 726 ~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs--~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l 803 (1057)
T PLN02919 726 ERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS--ESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLL 803 (1057)
T ss_pred cccCCCCccccccccCccEEEEeCCCCEEEEEEC--CCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhc
Confidence 123457999999998887765 78999999998765321110 0 0
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-------------cCCCCEEEEEEecCCCEEEEEeCCCc
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-------------GHSYRVLYLAMSPDGEAIVTGAGDET 792 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-------------gH~~~VtsLafSpDG~~LaSGS~DGt 792 (819)
.....++++++|+.+++ ...++.|++||..++....... +......+++++++|+.+++-+.++.
T Consensus 804 ~~P~Gvavd~dG~LYVA--Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~ 881 (1057)
T PLN02919 804 QHPLGVLCAKDGQIYVA--DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSL 881 (1057)
T ss_pred cCCceeeEeCCCcEEEE--ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCE
Confidence 12468899999986666 6678999999988765543221 11235788999999999998899999
Q ss_pred EEEEECCCCce
Q psy10114 793 LRFWNVFSKVR 803 (819)
Q Consensus 793 IrIWdl~s~~~ 803 (819)
|++||+.+++.
T Consensus 882 Irvid~~~~~~ 892 (1057)
T PLN02919 882 IRYLDLNKGEA 892 (1057)
T ss_pred EEEEECCCCcc
Confidence 99999988754
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.2e-08 Score=113.67 Aligned_cols=239 Identities=13% Similarity=0.259 Sum_probs=169.7
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCce---------------EEEEEecCCCCeEEEEeC--CceeeeccCCC
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK---------------QVHKLVGHTARVGALAWN--GDMLSSGSRDR 617 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk---------------~i~tl~gHs~~V~sLawn--g~~LaSGS~DG 617 (819)
.....|++|+....++|+|+.||.+++..+.+.. .-+++.||.+.|.-+.|| ...|-+...+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 4678899999999999999999999999876431 134678999999999995 45788999999
Q ss_pred eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEE
Q psy10114 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 618 tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LL 697 (819)
.|.+|-+-.+.......-....+.|.+++|+.||..++..-.||.|.+=.++..+ +..-.-.......+.|++|.+.++
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR-IwgKeLkg~~l~hv~ws~D~~~~L 172 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR-IWGKELKGQLLAHVLWSEDLEQAL 172 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce-ecchhcchheccceeecccHHHHH
Confidence 9999999887654434444556779999999999999999999999887665433 211111112234688999998777
Q ss_pred EEEccCCCCeEEEEECCCCc-------e-eEEE----cCCCCeEEEEEc--------cCCCEEEEEEecCCCeEEEEECC
Q psy10114 698 ASGGGTADRCIRFWNTLTGQ-------P-MQCV----DTGSQVCNLAWS--------KHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 698 aSGgGs~DgtIrIWDl~tg~-------~-v~~l----~~~s~V~sLafS--------pdg~~LastsGssDg~I~IWDl~ 757 (819)
+. -..|.+.++|....- + +... ..+..+..+.|. |+...+++ .+.+|.+.+..-.
T Consensus 173 f~---~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lav--cy~nGr~QiMR~e 247 (1189)
T KOG2041|consen 173 FK---KANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAV--CYANGRMQIMRSE 247 (1189)
T ss_pred hh---hcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEE--EEcCceehhhhhc
Confidence 63 368999999976431 1 1110 112345566664 46677777 7788888887655
Q ss_pred CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC---------cEEEEECCC
Q psy10114 758 TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE---------TLRFWNVFS 800 (819)
Q Consensus 758 s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG---------tIrIWdl~s 800 (819)
+......+. -.-.+.+..|+++|..|+.++.|. .|.++....
T Consensus 248 ND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G 298 (1189)
T KOG2041|consen 248 NDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYG 298 (1189)
T ss_pred CCCCCeEEe-cccEeecceecCCCcEEEEccCcccccCccccceEEEeccch
Confidence 433222222 225688999999999999987642 566665543
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.3e-07 Score=101.33 Aligned_cols=280 Identities=16% Similarity=0.273 Sum_probs=176.5
Q ss_pred EEEEEecC--CeEEEEEC-----------CCeEEEEEcCCCceEEEEeccCCCCCe-EEEEEcCCCCEEEEEecCceEEE
Q psy10114 516 LNLVDWSS--QNVLSVGL-----------GSCVYLWSACTSQVTRLCDLSADGNSV-TSVAWNERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 516 v~~ldwS~--~~LLa~g~-----------Dg~V~LWd~~tg~~~~l~~l~~h~~~V-tsLafSpdG~~LAsGs~DGtI~I 581 (819)
+..+++|+ +++++-+. +..+.|||+.+|...+..........+ .-..||.|++++|--..| .|.|
T Consensus 252 Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisI 330 (698)
T KOG2314|consen 252 VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISI 330 (698)
T ss_pred ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEE
Confidence 44455554 46766553 357999999999877654432222223 346899999999987775 5999
Q ss_pred eecCCceEEEEEecCCCCeEEEEeCCc--eeeeccC-----CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE
Q psy10114 582 WDVSVAKQVHKLVGHTARVGALAWNGD--MLSSGSR-----DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 582 WDl~tgk~i~tl~gHs~~V~sLawng~--~LaSGS~-----DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L 654 (819)
|+..+-..+..-.-.-..|....|++. .||-=.. -..+.+-.+.+.+ .+++-.-+.-.=+.+.|-.+|.+|
T Consensus 331 yEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~--~iRt~nlfnVsDckLhWQk~gdyL 408 (698)
T KOG2314|consen 331 YETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR--EIRTKNLFNVSDCKLHWQKSGDYL 408 (698)
T ss_pred EecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc--eeeeccceeeeccEEEeccCCcEE
Confidence 998765444332333456777788643 3321110 0122333333222 223333333344667888888888
Q ss_pred EEEEC----------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-Cc---eeE
Q psy10114 655 ASGGN----------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-GQ---PMQ 720 (819)
Q Consensus 655 aSGS~----------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-g~---~v~ 720 (819)
+.--. =..+.|+.++....--....-...|...+|.|.|..+++..|.+...++.+|-+.+ +. .+.
T Consensus 409 cvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk 488 (698)
T KOG2314|consen 409 CVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVK 488 (698)
T ss_pred EEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhh
Confidence 75321 11355666655443222223567889999999999998888767778899998874 22 233
Q ss_pred EEcCCCCeEEEEEccCCCEEEEEE-ecCCCeEEEEECCC--CcEEEEEecCCCCEEEEEEecCCCEEEEEeC------CC
Q psy10114 721 CVDTGSQVCNLAWSKHSSELVSTH-GYSQNQILVWKYPT--LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG------DE 791 (819)
Q Consensus 721 ~l~~~s~V~sLafSpdg~~Lasts-GssDg~I~IWDl~s--~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~------DG 791 (819)
.++. ...+.+.|+|.|+++++++ ++..|.+.++|..- .+.+... .| ...+.+.|.|.|++++|++. |.
T Consensus 489 ~~dk-~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~-eh-~~at~veWDPtGRYvvT~ss~wrhk~d~ 565 (698)
T KOG2314|consen 489 ELDK-KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASP-EH-FAATEVEWDPTGRYVVTSSSSWRHKVDN 565 (698)
T ss_pred hhcc-cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCc-cc-cccccceECCCCCEEEEeeehhhhcccc
Confidence 3332 5578899999999988754 34578999999873 3333222 23 34678999999999999876 55
Q ss_pred cEEEEECCCC
Q psy10114 792 TLRFWNVFSK 801 (819)
Q Consensus 792 tIrIWdl~s~ 801 (819)
--++|++...
T Consensus 566 GYri~tfqGr 575 (698)
T KOG2314|consen 566 GYRIFTFQGR 575 (698)
T ss_pred ceEEEEeecH
Confidence 6778887654
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-07 Score=99.56 Aligned_cols=238 Identities=11% Similarity=0.238 Sum_probs=158.0
Q ss_pred EEEEEe--cCCeEEEEECCCeEEEEEcCCC---ceEEEEeccCC------------CCCeEEEEEcCCC--CEEEEEecC
Q psy10114 516 LNLVDW--SSQNVLSVGLGSCVYLWSACTS---QVTRLCDLSAD------------GNSVTSVAWNERG--NLVAVGTHH 576 (819)
Q Consensus 516 v~~ldw--S~~~LLa~g~Dg~V~LWd~~tg---~~~~l~~l~~h------------~~~VtsLafSpdG--~~LAsGs~D 576 (819)
+.++.+ +|+.+++|..+|.|.++.-... +......++.| ...|..+.|.+++ ..+...+.|
T Consensus 28 is~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNd 107 (433)
T KOG1354|consen 28 ISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTND 107 (433)
T ss_pred eeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCC
Confidence 344444 4889999999999999965332 22222233333 2468899999876 467788899
Q ss_pred ceEEEeecCCceE-----------------------------------EEEE-ecCCCCeEEEEeCCc-eeeeccCCCeE
Q psy10114 577 GYVQVWDVSVAKQ-----------------------------------VHKL-VGHTARVGALAWNGD-MLSSGSRDRMI 619 (819)
Q Consensus 577 GtI~IWDl~tgk~-----------------------------------i~tl-~gHs~~V~sLawng~-~LaSGS~DGtI 619 (819)
.+|++|.+..... .+.+ .+|+-.|.+++++.+ .......|=.|
T Consensus 108 ktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRI 187 (433)
T KOG1354|consen 108 KTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADDLRI 187 (433)
T ss_pred cceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccceee
Confidence 9999998743210 0111 257788899999533 33344567889
Q ss_pred EEEECCCCCc-cceEEEecc-----cCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCce----eEE------------
Q psy10114 620 LQRDVRTPNS-QSERRLVGH-----RQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSP----LQT------------ 676 (819)
Q Consensus 620 ~IWDi~t~~~-~~v~~l~gH-----~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~----i~t------------ 676 (819)
.+|.+.-... ..+..++.+ ..-|++..|+| ..+.++-.+..|+|++-|++.... .+.
T Consensus 188 NLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsf 267 (433)
T KOG1354|consen 188 NLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSF 267 (433)
T ss_pred eeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhh
Confidence 9998875442 122223333 34588899999 456788889999999999985321 111
Q ss_pred EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC-CCceeEEEcC-------------CC---CeEEEEEccCCCE
Q psy10114 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL-TGQPMQCVDT-------------GS---QVCNLAWSKHSSE 739 (819)
Q Consensus 677 ~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~-tg~~v~~l~~-------------~s---~V~sLafSpdg~~ 739 (819)
|.+--..|..+.|+++|+++++- .=-+|++||+. ..+++.+... .. .-..++|+-++..
T Consensus 268 fseiIsSISDvKFs~sGryilsR----Dyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~ 343 (433)
T KOG1354|consen 268 FSEIISSISDVKFSHSGRYILSR----DYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSY 343 (433)
T ss_pred HHHHhhhhhceEEccCCcEEEEe----ccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcce
Confidence 12234578899999999988763 23799999994 4555554421 11 1245788888888
Q ss_pred EEEEEecCCCeEEEEECCCC
Q psy10114 740 LVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~ 759 (819)
+++ |+..+..++++...|
T Consensus 344 v~T--Gsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 344 VMT--GSYNNVFRVFNLARG 361 (433)
T ss_pred Eec--ccccceEEEecCCCC
Confidence 888 888899999995433
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-07 Score=99.66 Aligned_cols=189 Identities=17% Similarity=0.173 Sum_probs=133.7
Q ss_pred eEEEEECCCeEEEEEcCCCce-EEEEeccCCC---CCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCC
Q psy10114 525 NVLSVGLGSCVYLWSACTSQV-TRLCDLSADG---NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTA 598 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~-~~l~~l~~h~---~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~ 598 (819)
.++-+-..|+|.++.....+. ..+..+.... ....++.|++.|..++++..+|.+.+-+..... .+++.+.|.-
T Consensus 87 ~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~ 166 (339)
T KOG0280|consen 87 NLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEF 166 (339)
T ss_pred eeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccce
Confidence 455566678888886543321 1111121111 124578899999999999999999976655553 3458889999
Q ss_pred CeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCC-Cce
Q psy10114 599 RVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHS-MSP 673 (819)
Q Consensus 599 ~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t-~~~ 673 (819)
.++...| +++.+.+||.|+.+..||++.+........+-|...|+++.-+| .+.++++|+.|-.|++||.++ +++
T Consensus 167 E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kP 246 (339)
T KOG0280|consen 167 EAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKP 246 (339)
T ss_pred eeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCc
Confidence 9999999 47799999999999999999665433444677999999999887 577999999999999999984 566
Q ss_pred eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 674 i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
+..-. -.+.|..+.++|.-...+..+. .-+-.++-+...+
T Consensus 247 l~~~~-v~GGVWRi~~~p~~~~~lL~~C--Mh~G~ki~~~~~~ 286 (339)
T KOG0280|consen 247 LFKAK-VGGGVWRIKHHPEIFHRLLAAC--MHNGAKILDSSDK 286 (339)
T ss_pred cccCc-cccceEEEEecchhhhHHHHHH--HhcCceEEEeccc
Confidence 55433 3588999999996543322221 3344555555543
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-06 Score=98.28 Aligned_cols=273 Identities=11% Similarity=0.038 Sum_probs=169.8
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCe---------EEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSV---------TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~V---------tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.++.+++++.++.++-+|..+|+..=..++....... ..+.. ++..+++++.+|.+.-+|.++|+.+.+
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~ 145 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQ 145 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCccc
Confidence 4677888888889999999988765433333211100 01111 356788888999999999999998887
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC--CCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP--DNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp--dg~~LaSGS~DGtI~IWDl~t 670 (819)
.+.......+....++.++.++.+|.+..+|.++++................ .-+| .+..++.++.+|.+...|.++
T Consensus 146 ~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~-~~sP~v~~~~v~~~~~~g~v~a~d~~~ 224 (394)
T PRK11138 146 TKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRG-ESAPATAFGGAIVGGDNGRVSAVLMEQ 224 (394)
T ss_pred ccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccC-CCCCEEECCEEEEEcCCCEEEEEEccC
Confidence 7644332223333566777888899999999998874322221110000000 0112 234577788899999999999
Q ss_pred CceeEEEecCCC-------CEEEEEEcC--CCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEE
Q psy10114 671 MSPLQTYTEHLA-------AVKAIAWSP--HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741 (819)
Q Consensus 671 ~~~i~t~~~h~~-------~VtsLafSP--dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~La 741 (819)
++.+.+...... ....+.-+| .+..+++.+ .++.+..+|..+|+.+.....+.. ..+. ..+..++
T Consensus 225 G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~---~~g~l~ald~~tG~~~W~~~~~~~-~~~~--~~~~~vy 298 (394)
T PRK11138 225 GQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALA---YNGNLVALDLRSGQIVWKREYGSV-NDFA--VDGGRIY 298 (394)
T ss_pred ChhhheeccccCCCccchhcccccCCCcEEECCEEEEEE---cCCeEEEEECCCCCEEEeecCCCc-cCcE--EECCEEE
Confidence 987665432110 011111122 234455543 689999999999988776654332 1222 2456677
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCC-CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 742 STHGYSQNQILVWKYPTLTQVAKLTGHSY-RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 742 stsGssDg~I~IWDl~s~k~l~sl~gH~~-~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+ +..++.+..+|..+++.+.....-.. ...+... .+..|+.++.||.|...|..+++...+.
T Consensus 299 ~--~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~ 361 (394)
T PRK11138 299 L--VDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQ 361 (394)
T ss_pred E--EcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEE
Confidence 6 56789999999999988765432111 1222222 2457888999999999999998765443
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.9e-07 Score=108.57 Aligned_cols=281 Identities=17% Similarity=0.180 Sum_probs=194.2
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC------------CEEEEEecCceEEEee
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG------------NLVAVGTHHGYVQVWD 583 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG------------~~LAsGs~DGtI~IWD 583 (819)
.+++||+.+.+++-|..+.|.+-|..+-+.. ..++.|...|+.+.|.|.. -.||++...|.|.+||
T Consensus 18 ~~A~Dw~~~GLiAygshslV~VVDs~s~q~i--qsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d 95 (1062)
T KOG1912|consen 18 RNAADWSPSGLIAYGSHSLVSVVDSRSLQLI--QSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVD 95 (1062)
T ss_pred ccccccCccceEEEecCceEEEEehhhhhhh--hccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEE
Confidence 5778999999999999999999998776654 4667788999999998731 2678888899999999
Q ss_pred cCCceEEEEEecCCCCeEEEEe-----C-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEE
Q psy10114 584 VSVAKQVHKLVGHTARVGALAW-----N-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLAS 656 (819)
Q Consensus 584 l~tgk~i~tl~gHs~~V~sLaw-----n-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaS 656 (819)
...+..+..++.|..++..++| + .+.|++-.....+.+|+..+++.. -+.........|+.+.| |.+.+..
T Consensus 96 ~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~--Wk~~ys~~iLs~f~~DPfd~rh~~~ 173 (1062)
T KOG1912|consen 96 FVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKF--WKYDYSHEILSCFRVDPFDSRHFCV 173 (1062)
T ss_pred ehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCcee--eccccCCcceeeeeeCCCCcceEEE
Confidence 9999999999999999999999 2 367888888889999999998743 22223334566788888 7778887
Q ss_pred EECCCeEEEEECCC-------CceeEEEecCCC------------C-------------EEEEEEcCCCCeEEEEEccCC
Q psy10114 657 GGNDNRLYVWNLHS-------MSPLQTYTEHLA------------A-------------VKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 657 GS~DGtI~IWDl~t-------~~~i~t~~~h~~------------~-------------VtsLafSPdg~~LLaSGgGs~ 704 (819)
-+..|.+.+-+.-. ++..+.-..|.. . .-.++|+|.-+.++... .
T Consensus 174 l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~---~ 250 (1062)
T KOG1912|consen 174 LGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFIT---F 250 (1062)
T ss_pred EccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEE---e
Confidence 78888888776532 122222222211 0 11357788776665554 6
Q ss_pred CCeEEEEECCCCceeEEEcCC-CCeEEEEEccCCC--EEEEEEecCCCeEEEEECCC----------------CcEEEEE
Q psy10114 705 DRCIRFWNTLTGQPMQCVDTG-SQVCNLAWSKHSS--ELVSTHGYSQNQILVWKYPT----------------LTQVAKL 765 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~~~-s~V~sLafSpdg~--~LastsGssDg~I~IWDl~s----------------~k~l~sl 765 (819)
.+.+.++|++-..++..+... +.+.-+.+-|+++ .+++ +..||.+.+|-.+. +.++..+
T Consensus 251 prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~Lfc--lH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~v 328 (1062)
T KOG1912|consen 251 PRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFC--LHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVV 328 (1062)
T ss_pred ccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEE--EecCCeEEEEEeeccCccccccchhhccccccceEEE
Confidence 889999999988888777543 3344455556654 5666 67899999997654 2222222
Q ss_pred ecC-CCCEEEEEEecC-CCEEEEEeCCCcEEEEECCCCceec
Q psy10114 766 TGH-SYRVLYLAMSPD-GEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 766 ~gH-~~~VtsLafSpD-G~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
..- +.++...+..|. ...++.--.+|.+.+|++.+++...
T Consensus 329 r~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~ 370 (1062)
T KOG1912|consen 329 RPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHL 370 (1062)
T ss_pred eechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCc
Confidence 211 112223333343 3344444568889999998765443
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.5e-06 Score=96.92 Aligned_cols=271 Identities=16% Similarity=0.221 Sum_probs=169.7
Q ss_pred EEEEECCCeEEEEEcCCCce-EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEE
Q psy10114 526 VLSVGLGSCVYLWSACTSQV-TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALA 604 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~-~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLa 604 (819)
++++-....+.+|+...... ............++..+++++|+++|.+.. +.+.|++..+++.+.+.... .+.++.
T Consensus 4 ~~aVRsSe~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~~-~~v~i~~~~~~~~~lt~~~~--~~~~L~ 80 (566)
T KOG2315|consen 4 VYAVRSSEGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSDN-QVVKVFEIATLKVVLCVELK--KTYDLL 80 (566)
T ss_pred eEEEEccceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEcC-CeEEEEEccCCcEEEEeccc--eeeeee
Confidence 34555566788888754322 111111112345778899999988888664 67999999888655444433 778888
Q ss_pred eC--Cceeeec-----cC-----CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc
Q psy10114 605 WN--GDMLSSG-----SR-----DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 605 wn--g~~LaSG-----S~-----DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~ 672 (819)
|+ +++|.+= .. .-.+++|++.+... ...+..-.+.-++..|+.|..+.|- -..+.+.+||..+.+
T Consensus 81 fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~--~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~ 157 (566)
T KOG2315|consen 81 FSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQ--RSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFK 157 (566)
T ss_pred ecccccccccccccccccCCCCCCCceeeeeecccee--hhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCcc
Confidence 84 5555431 11 23577999988332 2222222222257888887764332 223568888875532
Q ss_pred eeEEEecCCCCEEEE----------------------------------------------------EEcCCCCeEEEEE
Q psy10114 673 PLQTYTEHLAAVKAI----------------------------------------------------AWSPHHHGLLASG 700 (819)
Q Consensus 673 ~i~t~~~h~~~VtsL----------------------------------------------------afSPdg~~LLaSG 700 (819)
.+.. +-|...|..+ .|++-|..+++..
T Consensus 158 ~~~~-kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLa 236 (566)
T KOG2315|consen 158 TIQH-KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLA 236 (566)
T ss_pred ceee-eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEE
Confidence 1110 1123333344 4444444443333
Q ss_pred ccCCC---------CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC
Q psy10114 701 GGTAD---------RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 701 gGs~D---------gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~ 771 (819)
+...| .++++.++........+...++|.++.|+++|++++++.|+.-..+.|+|++ ++.+..+ ..++
T Consensus 237 stdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egp 313 (566)
T KOG2315|consen 237 STDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGP 313 (566)
T ss_pred EEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCC
Confidence 21112 2455555553344444555789999999999999999999999999999975 5666555 4567
Q ss_pred EEEEEEecCCCEEEEEeC---CCcEEEEECCCCceecc
Q psy10114 772 VLYLAMSPDGEAIVTGAG---DETLRFWNVFSKVRSQR 806 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~---DGtIrIWdl~s~~~~~k 806 (819)
-+.+-|+|.|++|+.+|- .|.|-|||+.+.+...+
T Consensus 314 RN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~ 351 (566)
T KOG2315|consen 314 RNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK 351 (566)
T ss_pred ccceEECCCCCEEEEeecCCCCCceEEEeccchhhccc
Confidence 788999999999998776 48999999998665544
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.7e-06 Score=96.19 Aligned_cols=259 Identities=14% Similarity=0.032 Sum_probs=163.0
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEE-EEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTS-VAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~Vts-LafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
.++.++.++.++.++-+|.++|+..-...+.+ .+.+ ... .+..+++++.+|.+.-+|.++|+.+..........
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~---~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ 193 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAG---EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSL 193 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCcccccCCC---ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcc
Confidence 46778888889999999999998654333322 2221 112 24567788889999999999999988776432111
Q ss_pred -----EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEeccc--C---CeEEEEECC--CCCEEEEEECCCeEEEEEC
Q psy10114 601 -----GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR--Q---EVCGLKWSP--DNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 601 -----~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~--~---~VtsLafSp--dg~~LaSGS~DGtI~IWDl 668 (819)
.+-...++.++.++.+|.+...|..+++........... . ....+.-+| .+..++.++.+|.+...|.
T Consensus 194 ~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~ 273 (394)
T PRK11138 194 TLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDL 273 (394)
T ss_pred cccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEEC
Confidence 111223456777788999999998887643222211100 0 011111222 3556777888999999999
Q ss_pred CCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC--CCCeEEEEEccCCCEEEEEEec
Q psy10114 669 HSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--GSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 669 ~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--~s~V~sLafSpdg~~LastsGs 746 (819)
.+++.+.+.... ....+.. .+..+++.. .++.+..+|..+|+.+..... .....+... .+..+++ +.
T Consensus 274 ~tG~~~W~~~~~--~~~~~~~--~~~~vy~~~---~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v--~~ 342 (394)
T PRK11138 274 RSGQIVWKREYG--SVNDFAV--DGGRIYLVD---QNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVV--GD 342 (394)
T ss_pred CCCCEEEeecCC--CccCcEE--ECCEEEEEc---CCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEE--Ee
Confidence 999887665321 1112222 344455543 689999999999987665432 111222222 2456666 67
Q ss_pred CCCeEEEEECCCCcEEEEEecCCCCEEE-EEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 747 SQNQILVWKYPTLTQVAKLTGHSYRVLY-LAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl~gH~~~Vts-LafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.+|.+...|..+++.+.+.+-....+.+ ..+ .+..|+.++.||.|..++.
T Consensus 343 ~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 343 SEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 8999999999999998877644333332 222 2447888999999988764
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.1e-06 Score=94.51 Aligned_cols=213 Identities=9% Similarity=-0.001 Sum_probs=132.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCE-EEEEec---CceEEEeecCCceEEEEEecCCCCeEEEEe--C
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNL-VAVGTH---HGYVQVWDVSVAKQVHKLVGHTARVGALAW--N 606 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~-LAsGs~---DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--n 606 (819)
..|.+-|........+ . .. +......|+|||+. ++..+. +..|.++|+.+++...... ..+......| +
T Consensus 169 ~~l~~~d~dg~~~~~~-~--~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPD 243 (419)
T PRK04043 169 SNIVLADYTLTYQKVI-V--KG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKD 243 (419)
T ss_pred ceEEEECCCCCceeEE-c--cC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCC
Confidence 4566666655443322 2 12 37788999999985 665443 3568888998876544333 4555566677 5
Q ss_pred Cceee-eccC--CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCCceeEEEecC
Q psy10114 607 GDMLS-SGSR--DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-N--RLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 607 g~~La-SGS~--DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-G--tI~IWDl~t~~~i~t~~~h 680 (819)
|+.++ +.+. +..|.++|+.+++. ..+..+........|+|||+.++..++. + .|.+.|+.+++..+....
T Consensus 244 G~~la~~~~~~g~~~Iy~~dl~~g~~---~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~- 319 (419)
T PRK04043 244 GSKLLLTMAPKGQPDIYLYDTNTKTL---TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH- 319 (419)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCcE---EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-
Confidence 65444 3333 45688888877653 3333333333456899999988877643 2 688889988776333221
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCC-----C-CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC-CCeEEE
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTA-----D-RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS-QNQILV 753 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~-----D-gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss-Dg~I~I 753 (819)
... ...|+|+|+.++.+..... . ..|.+.|+.+++.. .+..........|+|||+.++.+.... ...+.+
T Consensus 320 g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~ 396 (419)
T PRK04043 320 GKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTANGVNQFPRFSSDGGSIMFIKYLGNQSALGI 396 (419)
T ss_pred CCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCCCCcCCeEECCCCCEEEEEEccCCcEEEEE
Confidence 111 2489999999988874211 1 47888899888653 333233344689999999988864322 223556
Q ss_pred EECC
Q psy10114 754 WKYP 757 (819)
Q Consensus 754 WDl~ 757 (819)
.++.
T Consensus 397 ~~l~ 400 (419)
T PRK04043 397 IRLN 400 (419)
T ss_pred EecC
Confidence 6654
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-05 Score=84.70 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=146.5
Q ss_pred EEEEcC-CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEe
Q psy10114 560 SVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 560 sLafSp-dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~ 636 (819)
+++|.+ +|.++++-...+.|..||..+++... +.... ...+++ .++.++.+..++. .++|..+++........
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~~~~~~~ 79 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVTVLADLP 79 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEETTCE-EEEETTTTEEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEEcCce-EEEecCCCcEEEEeecc
Confidence 678988 67777777778999999998876543 33222 445555 3556666666554 44498887644444432
Q ss_pred --c-ccCCeEEEEECCCCCEEEEEECC--------CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 637 --G-HRQEVCGLKWSPDNQYLASGGND--------NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 637 --g-H~~~VtsLafSpdg~~LaSGS~D--------GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
. .....+.+++.++|+..++.... |.|..++.. ++... ....-...+.++|+|+++.++++.+ ..
T Consensus 80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~-~~~~~~~pNGi~~s~dg~~lyv~ds--~~ 155 (246)
T PF08450_consen 80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV-VADGLGFPNGIAFSPDGKTLYVADS--FN 155 (246)
T ss_dssp TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE-EEEEESSEEEEEEETTSSEEEEEET--TT
T ss_pred CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE-EecCcccccceEECCcchheeeccc--cc
Confidence 1 33567899999999977776644 568888877 44333 3334566789999999998888765 78
Q ss_pred CeEEEEECCCCce-------eEEEcCC-CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 706 RCIRFWNTLTGQP-------MQCVDTG-SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 706 gtIrIWDl~tg~~-------v~~l~~~-s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
+.|..+++..... ...+... .....+++..+|+..++ ....+.|.++|.. ++.+..+.-....+++++|
T Consensus 156 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va--~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~f 232 (246)
T PF08450_consen 156 GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVA--DWGGGRIVVFDPD-GKLLREIELPVPRPTNCAF 232 (246)
T ss_dssp TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEE--EETTTEEEEEETT-SCEEEEEE-SSSSEEEEEE
T ss_pred ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEE--EcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEE
Confidence 8899999863221 1122222 24788999999987776 5678999999976 8888888866668999999
Q ss_pred e-cCCCEEEEE
Q psy10114 778 S-PDGEAIVTG 787 (819)
Q Consensus 778 S-pDG~~LaSG 787 (819)
. ++.+.|...
T Consensus 233 gg~~~~~L~vT 243 (246)
T PF08450_consen 233 GGPDGKTLYVT 243 (246)
T ss_dssp ESTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 4 565655543
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.7e-06 Score=105.83 Aligned_cols=272 Identities=14% Similarity=0.217 Sum_probs=168.6
Q ss_pred EEEEEec--CCeEEEEECCCeEEEE----EcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLW----SACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LW----d~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
+..+++- .+.++.+..+|.|.+. +..+.+...+..+ ...|.+++||||+..||..+.+|++.+.+ .+.+.
T Consensus 78 ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~v---d~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~ 153 (928)
T PF04762_consen 78 IVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSV---DSGILAASWSPDEELLALVTGEGNLLLMT-RDFDP 153 (928)
T ss_pred EEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEE---cCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceE
Confidence 3444443 3468888889999999 7777666555444 47899999999999999999999998875 45555
Q ss_pred EEEEecCCC-----CeEEEEeC-CceeeeccCCCeE--EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC--
Q psy10114 590 VHKLVGHTA-----RVGALAWN-GDMLSSGSRDRMI--LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-- 659 (819)
Q Consensus 590 i~tl~gHs~-----~V~sLawn-g~~LaSGS~DGtI--~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-- 659 (819)
+....-+.. .-.++-|. ...=+=|+..+.. ..-|...+ ......+. +.+.-..++|-.||+++|+.+-
T Consensus 154 i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~-~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~ 231 (928)
T PF04762_consen 154 ISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP-KVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEP 231 (928)
T ss_pred EEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC-ccccCccc-cCCCceEEEECCCCcEEEEEEEEc
Confidence 555443322 22234441 1111112211110 01111111 01112233 4556678999999999998874
Q ss_pred -C---CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-----CCCCeEE
Q psy10114 660 -D---NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-----TGSQVCN 730 (819)
Q Consensus 660 -D---GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-----~~s~V~s 730 (819)
+ ..++||+.+ |....+-+.-.+--.+++|.|.|..++++-.......|.+|. ++|..-..+. .+..|..
T Consensus 232 ~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~ 309 (928)
T PF04762_consen 232 ETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIE 309 (928)
T ss_pred CCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeE
Confidence 3 469999965 654444433334445789999999666654322345677776 4555444442 3457999
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCCCcEE--EEEec-CCCCEEEEEEecC-CCEEEEEeCCCcEEEEEC
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQV--AKLTG-HSYRVLYLAMSPD-GEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s~k~l--~sl~g-H~~~VtsLafSpD-G~~LaSGS~DGtIrIWdl 798 (819)
+.|++|+..|++.. . ..|.+|-..+..-. +++.- ....+..+.|+|. ...|..++.+|.+..++.
T Consensus 310 l~Wn~ds~iLAv~~--~-~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 310 LAWNSDSEILAVWL--E-DRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred EEECCCCCEEEEEe--c-CCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEE
Confidence 99999999999943 3 34999998775432 23332 2334556999994 456777777677765444
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.2e-08 Score=122.67 Aligned_cols=191 Identities=15% Similarity=0.245 Sum_probs=150.0
Q ss_pred CCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 598 ARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 598 ~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
..|.++.-. ..+.++|+.||.|++|....++........+. ..|+.+.|+.+|+.+..+..||.+.+|... .++..
T Consensus 2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~ 2286 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYT 2286 (2439)
T ss_pred CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccC-Cccee
Confidence 344444432 33778999999999999988775444444444 889999999999999999999999999986 67777
Q ss_pred EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC--ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG--QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 676 t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg--~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
..+.|.....+..|-. ..++.+|..+.++.+.+||..-. .......|.+.++++++.|..+.+++ |+.+|.|++
T Consensus 2287 s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllis--ggr~G~v~l 2362 (2439)
T KOG1064|consen 2287 SWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLIS--GGRKGEVCL 2362 (2439)
T ss_pred ccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEe--cCCcCcEEE
Confidence 7888988888888876 33455555567889999997643 22222567889999999999999999 999999999
Q ss_pred EECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 754 WDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
||++..+..+.++. +. ...++++|+..|.++||++..-...
T Consensus 2363 ~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll 2403 (2439)
T KOG1064|consen 2363 FDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLL 2403 (2439)
T ss_pred eehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchh
Confidence 99998887766654 33 5568999999999999999876443
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.8e-06 Score=85.55 Aligned_cols=217 Identities=13% Similarity=0.062 Sum_probs=140.1
Q ss_pred cCceEEEeecCCceEEEEEec---CCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 575 HHGYVQVWDVSVAKQVHKLVG---HTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 575 ~DGtI~IWDl~tgk~i~tl~g---Hs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
.+|+|..+|..+|+.+.+..- ....+.....+++.+++++.++.+..+|..+++......+.+..... . ..++
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~---~-~~~~ 76 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA---P-VVDG 76 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG---E-EEET
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce---e-eecc
Confidence 368999999999999988864 22222222226778888899999999999888744333332211111 1 2245
Q ss_pred CEEEEEECCCeEEEEECCCCceeEEE-ecCC---CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCC
Q psy10114 652 QYLASGGNDNRLYVWNLHSMSPLQTY-TEHL---AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 727 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~~i~t~-~~h~---~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~ 727 (819)
..+++++.|+.+..+|.++|+.+.+. .... ...........+..+++.. .++.|..+|.++|+.+........
T Consensus 77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~l~~~d~~tG~~~w~~~~~~~ 153 (238)
T PF13360_consen 77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGT---SSGKLVALDPKTGKLLWKYPVGEP 153 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEE---TCSEEEEEETTTTEEEEEEESSTT
T ss_pred cccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEe---ccCcEEEEecCCCcEEEEeecCCC
Confidence 67777888899999999999998884 3221 1112222222366566554 589999999999999877754321
Q ss_pred -----------eEEEEEccCCCEEEEEEecCCCe-EEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 728 -----------VCNLAWSKHSSELVSTHGYSQNQ-ILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 728 -----------V~sLafSpdg~~LastsGssDg~-I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
+..-....++ .+++ ...++. +.+ |..+++.+.+.. ...+.. ....++..|+.++.|+.|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~v~~--~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~ 226 (238)
T PF13360_consen 154 RGSSPISSFSDINGSPVISDG-RVYV--SSGDGRVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYA 226 (238)
T ss_dssp -SS--EEEETTEEEEEECCTT-EEEE--ECCTSSEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEE
T ss_pred CCCcceeeecccccceEEECC-EEEE--EcCCCeEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEE
Confidence 1122222344 5555 445664 555 999999775333 222322 24567788888889999999
Q ss_pred EECCCCceec
Q psy10114 796 WNVFSKVRSQ 805 (819)
Q Consensus 796 Wdl~s~~~~~ 805 (819)
||+.+++..-
T Consensus 227 ~d~~tG~~~W 236 (238)
T PF13360_consen 227 LDLKTGKVVW 236 (238)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCCEEe
Confidence 9999998654
|
... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.7e-06 Score=84.26 Aligned_cols=223 Identities=15% Similarity=0.083 Sum_probs=144.1
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceee
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLS 611 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~La 611 (819)
+|.|..+|..+|+..-...+........+. ..+++..+++++.++.+..||..+|+.+.+.............+++.++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~ 80 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVY 80 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccc
Confidence 578899999888876555553212222222 2235677888899999999999999999888752221222345677777
Q ss_pred eccCCCeEEEEECCCCCccceEEEecc-c-CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCC------
Q psy10114 612 SGSRDRMILQRDVRTPNSQSERRLVGH-R-QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA------ 683 (819)
Q Consensus 612 SGS~DGtI~IWDi~t~~~~~v~~l~gH-~-~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~------ 683 (819)
.++.++.+..+|..+++.......... . ..........+++.++.+..++.|..+|.++|+.+.........
T Consensus 81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 160 (238)
T PF13360_consen 81 VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPIS 160 (238)
T ss_dssp EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EE
T ss_pred cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCccee
Confidence 777888999999888875332111110 1 11122223334788899998999999999999998887654322
Q ss_pred ----EEEEEEcCCCCeEEEEEccCCCCe-EEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 684 ----VKAIAWSPHHHGLLASGGGTADRC-IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 684 ----VtsLafSPdg~~LLaSGgGs~Dgt-IrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
+..-....++ .++++. .++. +.+ |..+++.+.... ....... ...++..+++ +..++.+..||..+
T Consensus 161 ~~~~~~~~~~~~~~-~v~~~~---~~g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~~l~~--~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 161 SFSDINGSPVISDG-RVYVSS---GDGRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGGTLYV--TSSDGRLYALDLKT 231 (238)
T ss_dssp EETTEEEEEECCTT-EEEEEC---CTSSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCTEEEE--EETTTEEEEEETTT
T ss_pred eecccccceEEECC-EEEEEc---CCCeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCCEEEE--EeCCCEEEEEECCC
Confidence 1222222334 555554 4564 555 999999765444 3333331 3467788887 44799999999999
Q ss_pred CcEEEE
Q psy10114 759 LTQVAK 764 (819)
Q Consensus 759 ~k~l~s 764 (819)
++.+.+
T Consensus 232 G~~~W~ 237 (238)
T PF13360_consen 232 GKVVWQ 237 (238)
T ss_dssp TEEEEE
T ss_pred CCEEeE
Confidence 988753
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-05 Score=101.78 Aligned_cols=227 Identities=14% Similarity=0.151 Sum_probs=146.7
Q ss_pred eEEEEECCCeEEEEEcCCCceEEEEeccCC------------CCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceEEE
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSAD------------GNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVH 591 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h------------~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~i~ 591 (819)
.+++-..++.|.++|........+.. .+. -.....++++++++.|+++.. ++.|+++|..++. +.
T Consensus 582 lyVaDs~n~rI~v~d~~G~~i~~ig~-~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~ 659 (1057)
T PLN02919 582 LFISDSNHNRIVVTDLDGNFIVQIGS-TGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNET-VR 659 (1057)
T ss_pred EEEEECCCCeEEEEeCCCCEEEEEcc-CCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EE
Confidence 44555566789999976433222111 111 123578999998887766654 5789999987764 43
Q ss_pred EEecC-----------------CCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEec--------------
Q psy10114 592 KLVGH-----------------TARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVG-------------- 637 (819)
Q Consensus 592 tl~gH-----------------s~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g-------------- 637 (819)
++.+- -..-..++++ +..+++.+.++.|++||..++.. ..+.+
T Consensus 660 tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v---~~~~G~G~~~~~~g~~~~~ 736 (1057)
T PLN02919 660 TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVT---RVFSGDGYERNLNGSSGTS 736 (1057)
T ss_pred EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeE---EEEecCCccccCCCCcccc
Confidence 33210 0122467774 44667778889999999876532 11111
Q ss_pred -ccCCeEEEEECCCCCEE-EEEECCCeEEEEECCCCceeEEE-------------ecC--------CCCEEEEEEcCCCC
Q psy10114 638 -HRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTY-------------TEH--------LAAVKAIAWSPHHH 694 (819)
Q Consensus 638 -H~~~VtsLafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~-------------~~h--------~~~VtsLafSPdg~ 694 (819)
.-....+++++|+++.| ++.+.++.|++||+.++...... ... -.....++++++|.
T Consensus 737 ~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~ 816 (1057)
T PLN02919 737 TSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ 816 (1057)
T ss_pred ccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc
Confidence 11245679999999844 55566789999999876532111 000 11235889999997
Q ss_pred eEEEEEccCCCCeEEEEECCCCceeEEEcCC--------------CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTG--------------SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--------------s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k 760 (819)
++++.. .++.|++||..++........+ .....++++++|+.+++ ...++.|++||+.+++
T Consensus 817 -LYVADs--~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVa--Dt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 817 -IYVADS--YNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVA--DTNNSLIRYLDLNKGE 891 (1057)
T ss_pred -EEEEEC--CCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEE--ECCCCEEEEEECCCCc
Confidence 455543 7899999999887765443322 24678999999986666 6788999999998876
Q ss_pred E
Q psy10114 761 Q 761 (819)
Q Consensus 761 ~ 761 (819)
.
T Consensus 892 ~ 892 (1057)
T PLN02919 892 A 892 (1057)
T ss_pred c
Confidence 4
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-05 Score=92.36 Aligned_cols=215 Identities=12% Similarity=0.036 Sum_probs=136.4
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCce-eeeccC---CCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDM-LSSGSR---DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~-LaSGS~---DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
.|.+-|.+... .+.+.... ......| +|+. ++..+. +..|.++|+.+++.. .+....+......|+|||
T Consensus 170 ~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~---~lt~~~g~~~~~~~SPDG 244 (419)
T PRK04043 170 NIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKE---KIASSQGMLVVSDVSKDG 244 (419)
T ss_pred eEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEE---EEecCCCcEEeeEECCCC
Confidence 55555554333 33333333 6677888 4653 543322 457999999886643 233344556678899999
Q ss_pred CEEEEEE-C--CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCe
Q psy10114 652 QYLASGG-N--DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQV 728 (819)
Q Consensus 652 ~~LaSGS-~--DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V 728 (819)
+.++... . +..|.++|+.+++. ..+..+.+......|+|||+.++.+........|.+.|+.+++..+....+..
T Consensus 245 ~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~- 322 (419)
T PRK04043 245 SKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN- 322 (419)
T ss_pred CEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCc-
Confidence 8776543 2 34688889877764 44544444345668999999998886422233788889988876444332222
Q ss_pred EEEEEccCCCEEEEEEecCC-------CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC---CcEEEEEC
Q psy10114 729 CNLAWSKHSSELVSTHGYSQ-------NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD---ETLRFWNV 798 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssD-------g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D---GtIrIWdl 798 (819)
...|+|||+.++.++...+ ..|.+.|+.++.. ..+... +......|+|||+.|+..+.+ ..+.+.++
T Consensus 323 -~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l 399 (419)
T PRK04043 323 -NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRL 399 (419)
T ss_pred -CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEec
Confidence 3589999999988754321 4788889887754 344432 233458899999988765543 24667777
Q ss_pred CCCc
Q psy10114 799 FSKV 802 (819)
Q Consensus 799 ~s~~ 802 (819)
....
T Consensus 400 ~g~~ 403 (419)
T PRK04043 400 NYNK 403 (419)
T ss_pred CCCe
Confidence 6644
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.1e-08 Score=110.02 Aligned_cols=208 Identities=16% Similarity=0.266 Sum_probs=157.6
Q ss_pred EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC-----ccceEEEecccCCeEEEEECCCCCEEEEEECCCe
Q psy10114 590 VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN-----SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNR 662 (819)
Q Consensus 590 i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~-----~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGt 662 (819)
+..+.||...|..++- |.+-+++++.|++|++|.++... .....++..|+..|.++.|-.+.+.++++ ||.
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCc
Confidence 5567799999998877 67899999999999999997542 12446778999999999999988888765 789
Q ss_pred EEEEECCCCceeEEEec--CCCCEEEEEEcCC-CCeEEEEEccCCCCeEEEEECCCCceeEEEc------CCCCeEEEEE
Q psy10114 663 LYVWNLHSMSPLQTYTE--HLAAVKAIAWSPH-HHGLLASGGGTADRCIRFWNTLTGQPMQCVD------TGSQVCNLAW 733 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~--h~~~VtsLafSPd-g~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~------~~s~V~sLaf 733 (819)
|.+||.--++++.+... ..+++..+..-++ ...++.+|. +...+|+++|.+.++-...++ ...-+.+++.
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgc-saeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGC-SAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeec-cchhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 99999877777654431 2233333433343 333444442 589999999999987666553 2345889999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEE-EECCCCce
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF-WNVFSKVR 803 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrI-Wdl~s~~~ 803 (819)
.+.|+.+++ +-++|.|.+.|.++|+.+.+++........++- |..+.++....|.++.+ |..-++..
T Consensus 885 a~~GN~lAa--~LSnGci~~LDaR~G~vINswrpmecdllqlaa-psdq~L~~saldHslaVnWhaldgim 952 (1034)
T KOG4190|consen 885 ADKGNKLAA--ALSNGCIAILDARNGKVINSWRPMECDLLQLAA-PSDQALAQSALDHSLAVNWHALDGIM 952 (1034)
T ss_pred ccCcchhhH--HhcCCcEEEEecCCCceeccCCcccchhhhhcC-chhHHHHhhcccceeEeeehhcCCee
Confidence 999999999 889999999999999999888766666666653 56678888888888888 87666543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.2e-07 Score=96.08 Aligned_cols=238 Identities=14% Similarity=0.309 Sum_probs=164.7
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-----EEEEEecCC------------CCeEEEEe--C--Cceeeec
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-----QVHKLVGHT------------ARVGALAW--N--GDMLSSG 613 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-----~i~tl~gHs------------~~V~sLaw--n--g~~LaSG 613 (819)
.+.|+++.|...|.++++|...|.|.++.-+... ....+++|. ..|..+.| + -+.++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 5789999999999999999999999999765432 233456664 35778888 2 3366777
Q ss_pred cCCCeEEEEECCCCCcc----------------------------------------ce-EEEecccCCeEEEEECCCCC
Q psy10114 614 SRDRMILQRDVRTPNSQ----------------------------------------SE-RRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 614 S~DGtI~IWDi~t~~~~----------------------------------------~v-~~l~gH~~~VtsLafSpdg~ 652 (819)
+.|++|++|.+...... +. .....|.-.|.++.++.|..
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 88999999988654100 00 01145677788999999888
Q ss_pred EEEEEECCCeEEEEECCCCce---eEEEecC-----CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee-----
Q psy10114 653 YLASGGNDNRLYVWNLHSMSP---LQTYTEH-----LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM----- 719 (819)
Q Consensus 653 ~LaSGS~DGtI~IWDl~t~~~---i~t~~~h-----~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v----- 719 (819)
.++++ .|-.|.+|+++-... +..++.| ...|++..|+|....++.-++ ..|.|++-|++.....
T Consensus 186 t~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSs--SkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 186 TLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSS--SKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred eeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEec--CCCcEEehhhhhhhhccCchh
Confidence 87765 567899999864332 2222333 345788899998766655443 7899999999843211
Q ss_pred -E--EE---------cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEEEecCC------------CCE--
Q psy10114 720 -Q--CV---------DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAKLTGHS------------YRV-- 772 (819)
Q Consensus 720 -~--~l---------~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~sl~gH~------------~~V-- 772 (819)
. .+ ..-+.|..+.|+++|+++++ .+-.++++||.+. ..++.++.-|. ..|
T Consensus 263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIls---RdyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifd 339 (460)
T COG5170 263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILS---RDYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFD 339 (460)
T ss_pred hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEE---eccceEEEEecccccCCceeechHHHHHHHHHhhhhccceee
Confidence 0 01 11256889999999999997 2457899999874 45666664442 223
Q ss_pred -EEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 773 -LYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 773 -tsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
..+.||.|.+.+.+|+.....-++-.
T Consensus 340 kFeisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 340 KFEISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred eEEEEecCCcccccccccccceeeecc
Confidence 34778888888888887777666653
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-07 Score=105.36 Aligned_cols=245 Identities=16% Similarity=0.185 Sum_probs=157.0
Q ss_pred eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-------ceEEEEEecCCCCeEEEEeCCceeeeccCCC
Q psy10114 545 VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-------AKQVHKLVGHTARVGALAWNGDMLSSGSRDR 617 (819)
Q Consensus 545 ~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-------gk~i~tl~gHs~~V~sLawng~~LaSGS~DG 617 (819)
..+++.+.+|+..|+.++--.+.+-+++++.|.+|++|.++. ..+..+++.|+.+|.++.|-.+.-..++.||
T Consensus 725 ~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~ 804 (1034)
T KOG4190|consen 725 HIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDG 804 (1034)
T ss_pred eeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccC
Confidence 456788899999999998888888999999999999999853 2466778899999999999544444556789
Q ss_pred eEEEEECCCCCccceEEEecccCCeEEEEECC--CCCEE-EEEECCCeEEEEECCCCceeEEEe-----cCCCCEEEEEE
Q psy10114 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSP--DNQYL-ASGGNDNRLYVWNLHSMSPLQTYT-----EHLAAVKAIAW 689 (819)
Q Consensus 618 tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp--dg~~L-aSGS~DGtI~IWDl~t~~~i~t~~-----~h~~~VtsLaf 689 (819)
.|.+||.--+............+.+..+..-+ +...+ |.++...+|+++|.+..+-...++ +..+-+.+++.
T Consensus 805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 99999976554321111111122233333333 33333 344778999999999887655554 34567899999
Q ss_pred cCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEE-EECCCCcEEEEEec
Q psy10114 690 SPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILV-WKYPTLTQVAKLTG 767 (819)
Q Consensus 690 SPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~I-WDl~s~k~l~sl~g 767 (819)
.+.|+.+.+.- .+|+|.+.|.++|+.+..... ......++ .|..+.++. ...|..+.+ |..-++......+.
T Consensus 885 a~~GN~lAa~L---SnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~--saldHslaVnWhaldgimh~q~kp 958 (1034)
T KOG4190|consen 885 ADKGNKLAAAL---SNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQ--SALDHSLAVNWHALDGIMHLQDKP 958 (1034)
T ss_pred ccCcchhhHHh---cCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHh--hcccceeEeeehhcCCeeeeccCC
Confidence 99999877643 689999999999998876532 22222222 244445554 345666766 76555544333332
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 768 HSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 768 H~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
...+..-+. .-|..++++.....+.+|.
T Consensus 959 ppepahflq--svgpSLV~a~~Gn~lgVYa 986 (1034)
T KOG4190|consen 959 PPEPAHFLQ--SVGPSLVTAQNGNILGVYA 986 (1034)
T ss_pred CCcchhhhh--ccCceeEEeccCcEEEEEe
Confidence 222211111 1244555555555555653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1e-05 Score=85.23 Aligned_cols=228 Identities=12% Similarity=0.044 Sum_probs=154.7
Q ss_pred CCCEEEEEecCceEEEeecCCceE-EEEEecCCCCeEEEE---eCCceeeeccCCCeEEEEECCCCCccceEEEecccCC
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQ-VHKLVGHTARVGALA---WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE 641 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~-i~tl~gHs~~V~sLa---wng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~ 641 (819)
...+||.|+..|...+|...+.+. .+....|...|.-+. -+.-.+..++.|.++++.+++.+... ...|...
T Consensus 83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~----~~~h~~~ 158 (344)
T KOG4532|consen 83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNK----FAVHNQN 158 (344)
T ss_pred cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccc----ceeeccc
Confidence 446899999999999999986543 333344444333222 13345677888888888888765432 2233333
Q ss_pred --eEEEEECCCCCEEEEEECCCeEEEEECCCCc-eeEE--EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 642 --VCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-PLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 642 --VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
+.+++.++|++++++.+....|..|.+.... .+.. .......-.+..|+..... +|++. +||++.|||++..
T Consensus 159 ~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~-FAv~~--Qdg~~~I~DVR~~ 235 (344)
T KOG4532|consen 159 LTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQ-FAVVF--QDGTCAIYDVRNM 235 (344)
T ss_pred cceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcce-EEEEe--cCCcEEEEEeccc
Confidence 7889999999999999999999999986533 2222 2223334467788887664 44543 9999999999875
Q ss_pred ceeEE------EcCCCCeEEEEEccCCCE--EEEEEecCCCeEEEEECCCCcEEEEEec-------CC-CCEEEEEEecC
Q psy10114 717 QPMQC------VDTGSQVCNLAWSKHSSE--LVSTHGYSQNQILVWKYPTLTQVAKLTG-------HS-YRVLYLAMSPD 780 (819)
Q Consensus 717 ~~v~~------l~~~s~V~sLafSpdg~~--LastsGssDg~I~IWDl~s~k~l~sl~g-------H~-~~VtsLafSpD 780 (819)
..... -.+.+.+..+.|++.|.. |+. ....+.+.+.|+++++....+.. |. ..+....|+.+
T Consensus 236 ~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~--sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~ 313 (344)
T KOG4532|consen 236 ATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFI--SEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNE 313 (344)
T ss_pred ccchhhhcccCCCCCCceEEEEecCCCcceEEEE--ecCcceEEEEEcccCceeeEEecCccccccccccccccccccCC
Confidence 43221 146778999999986643 333 45678899999998877665542 32 23788888888
Q ss_pred CCEEEEEeCCCcEEEEECCCCce
Q psy10114 781 GEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+..+.+.+++ .+.=|++.++.+
T Consensus 314 n~s~~v~~e~-~~ae~ni~srsR 335 (344)
T KOG4532|consen 314 NESNDVKNEL-QGAEYNILSRSR 335 (344)
T ss_pred Ccccccccch-hhheeeccccce
Confidence 8877776665 456677766544
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=2e-06 Score=92.87 Aligned_cols=249 Identities=16% Similarity=0.222 Sum_probs=173.0
Q ss_pred EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC-CceEEEEEe-cCCCCeEEEEeC--CceeeeccCCCeEEEE
Q psy10114 547 RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS-VAKQVHKLV-GHTARVGALAWN--GDMLSSGSRDRMILQR 622 (819)
Q Consensus 547 ~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~-tgk~i~tl~-gHs~~V~sLawn--g~~LaSGS~DGtI~IW 622 (819)
.+..+++|.+.|++...-|...-+++.+.|.+++||--. .++.-..+. .-..+++++++. ...|+.|-..|++.-+
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtef 95 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEF 95 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEE
Confidence 344567888899998888888889999999999999543 344333332 235677888884 4488899999999888
Q ss_pred ECCCC--CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEE
Q psy10114 623 DVRTP--NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 623 Di~t~--~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSG 700 (819)
.+... +....+....|...+..+-|+-....+++.+.|..+.---.+.+..+..+.-. ..-+++.+.-. ....|
T Consensus 96 s~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~-~~~t~~~~d~~---~~fvG 171 (404)
T KOG1409|consen 96 ALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFE-TPASALQFDAL---YAFVG 171 (404)
T ss_pred EhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEee-ccCCCCceeeE---EEEec
Confidence 66432 22344566789999999999999999999999977654444554433222100 00011111100 11122
Q ss_pred ccCCCCeEEEEECC--CCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE-EEEEecCCCCEEEEE
Q psy10114 701 GGTADRCIRFWNTL--TGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ-VAKLTGHSYRVLYLA 776 (819)
Q Consensus 701 gGs~DgtIrIWDl~--tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~-l~sl~gH~~~VtsLa 776 (819)
...|.|..-.+. .-..+..+ .+...+.+++|.+....+++ |.+|..+.+||+.-.+- ..++.+|...|..+.
T Consensus 172 --d~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfS--g~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~ 247 (404)
T KOG1409|consen 172 --DHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFS--GASDHSVIMWDIGGRKGTAYELQGHNDKVQALS 247 (404)
T ss_pred --ccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEe--ccccCceEEEeccCCcceeeeeccchhhhhhhh
Confidence 234444333222 22333333 56788999999999999999 99999999999975443 467889999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 777 MSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 777 fSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
.-+--+.+.+++.||.|.+||.+.+..
T Consensus 248 ~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 248 YAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred hhhhheeeeeccCCCeEEEEeccceee
Confidence 888888999999999999999987654
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.6e-06 Score=86.13 Aligned_cols=215 Identities=13% Similarity=0.075 Sum_probs=143.0
Q ss_pred CCeEEEEECCCeEEEEEcCCCce-EEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQV-TRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~-~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
...++.+|..|...+|...+.+. .++++ .+...|+-+.=..+ ..-+..++.|.++++.+++-+..-.......-.+
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd--~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ 161 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCD--VSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQ 161 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeec--ccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccce
Confidence 35688888999999999986653 23333 33333332221111 2346677888888888876543322222111236
Q ss_pred EEEEe--CCceeeeccCCCeEEEEECCCCCccceE-EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce-eE-
Q psy10114 601 GALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER-RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP-LQ- 675 (819)
Q Consensus 601 ~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~-~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~-i~- 675 (819)
.+++. ++..+++.++...|..|.+.......+. .....++.-.+..|+.....+|++++||++.|||++.... ..
T Consensus 162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~ 241 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE 241 (344)
T ss_pred eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhh
Confidence 67777 5778999999999999999876544333 3344455567788999999999999999999999987542 22
Q ss_pred ---EEecCCCCEEEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEc--------CCCC-eEEEEEccCCCEEE
Q psy10114 676 ---TYTEHLAAVKAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVD--------TGSQ-VCNLAWSKHSSELV 741 (819)
Q Consensus 676 ---t~~~h~~~VtsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--------~~s~-V~sLafSpdg~~La 741 (819)
+-..|.+++..+.|++.|. .++.+- .-+.+.+.|+++++..+.+. +..+ +..-.|+.++..+.
T Consensus 242 ~sstrp~hnGa~R~c~Fsl~g~lDLLf~sE---hfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~ 318 (344)
T KOG4532|consen 242 ISSTRPHHNGAFRVCRFSLYGLLDLLFISE---HFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESND 318 (344)
T ss_pred hcccCCCCCCceEEEEecCCCcceEEEEec---CcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccc
Confidence 2235899999999998664 344443 46789999999987666552 2223 66666766666555
Q ss_pred E
Q psy10114 742 S 742 (819)
Q Consensus 742 s 742 (819)
+
T Consensus 319 v 319 (344)
T KOG4532|consen 319 V 319 (344)
T ss_pred c
Confidence 5
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-05 Score=89.80 Aligned_cols=279 Identities=14% Similarity=0.222 Sum_probs=183.9
Q ss_pred CcceEEEEEecCC--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-----------Cce
Q psy10114 512 DDFYLNLVDWSSQ--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-----------HGY 578 (819)
Q Consensus 512 dDfyv~~ldwS~~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-----------DGt 578 (819)
..+.-+-+.||+. ++++- ....|.+|-..+-+. +..+. | ..|.-+.|||..++|++-+. ...
T Consensus 209 enWTetyv~wSP~GTYL~t~-Hk~GI~lWGG~~f~r--~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 209 ENWTETYVRWSPKGTYLVTF-HKQGIALWGGESFDR--IQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred hcceeeeEEecCCceEEEEE-eccceeeecCccHHH--HHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCce
Confidence 4455667888863 45544 445688997655432 22333 3 46889999999999998642 257
Q ss_pred EEEeecCCceEEEEEecCCC--CeE-EEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCE
Q psy10114 579 VQVWDVSVAKQVHKLVGHTA--RVG-ALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY 653 (819)
Q Consensus 579 I~IWDl~tgk~i~tl~gHs~--~V~-sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~ 653 (819)
+.|||+.+|...+.+....+ .+. -+.| ++.++|--.. .+|.|++..+-...... .-.-..|....|+|.++.
T Consensus 284 l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~K--slki~gIr~FswsP~~~l 360 (698)
T KOG2314|consen 284 LIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKK--SLKISGIRDFSWSPTSNL 360 (698)
T ss_pred EEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeeccc--ccCCccccCcccCCCcce
Confidence 99999999999888875322 222 2344 5667765555 57888886552211111 112356888999999998
Q ss_pred EEEEECC-----CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc-------CCCCeEEEEECCCC-ceeE
Q psy10114 654 LASGGND-----NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTG-QPMQ 720 (819)
Q Consensus 654 LaSGS~D-----GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG-------s~DgtIrIWDl~tg-~~v~ 720 (819)
||--+.. ..+.+-.+-+++.+++-.-+.-.=..+-|..+|.+|.+-... +.-..+.|+.++.. -++.
T Consensus 361 lAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve 440 (698)
T KOG2314|consen 361 LAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVE 440 (698)
T ss_pred EEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCce
Confidence 8865432 246667777777666655444444557788888877654321 01223556666543 3456
Q ss_pred EEcCCCCeEEEEEccCCCEEEEEEecC-CCeEEEEECCC-C---cEEEEEecCCCCEEEEEEecCCCEEEEEe---CCCc
Q psy10114 721 CVDTGSQVCNLAWSKHSSELVSTHGYS-QNQILVWKYPT-L---TQVAKLTGHSYRVLYLAMSPDGEAIVTGA---GDET 792 (819)
Q Consensus 721 ~l~~~s~V~sLafSpdg~~LastsGss-Dg~I~IWDl~s-~---k~l~sl~gH~~~VtsLafSpDG~~LaSGS---~DGt 792 (819)
.++....|...+|-|.|+.+++.+|.. ..++.+|.+++ . +.+..+. ....+.+.|+|.|++++.++ ..|.
T Consensus 441 ~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~ 518 (698)
T KOG2314|consen 441 VVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGD 518 (698)
T ss_pred eeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccc
Confidence 667788899999999999999988754 35688888763 2 2233333 24567899999999998764 4789
Q ss_pred EEEEECCC
Q psy10114 793 LRFWNVFS 800 (819)
Q Consensus 793 IrIWdl~s 800 (819)
+.++|..-
T Consensus 519 l~F~D~~~ 526 (698)
T KOG2314|consen 519 LEFYDTDY 526 (698)
T ss_pred eEEEecch
Confidence 99999875
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.8e-08 Score=115.12 Aligned_cols=213 Identities=18% Similarity=0.310 Sum_probs=153.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeec-cCCC-eEEEEECC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSG-SRDR-MILQRDVR 625 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSG-S~DG-tI~IWDi~ 625 (819)
.+..+....+|++|+.+.++|++|+..|.|+++++.+|.......+|.+.|+-+.. +|+.+++. +... ...+|+..
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred hhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence 45667889999999999999999999999999999999999999999999999988 56654443 3333 56789987
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE-ec---CCCCEEEEEEcCCCCeEEEEEc
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY-TE---HLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~-~~---h~~~VtsLafSPdg~~LLaSGg 701 (819)
..- .....+ .+-.++.|+...+.-+.|+......+||++++.++.++ .+ ....-+...|+|+...++
T Consensus 1176 s~~-~~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---- 1246 (1516)
T KOG1832|consen 1176 STG-GPRHSF----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---- 1246 (1516)
T ss_pred ccc-Cccccc----cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe----
Confidence 622 222333 23467888876666666777678999999999887763 22 222336788999988555
Q ss_pred cCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC
Q psy10114 702 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG 781 (819)
.||. +||.+..+.++.++.-..-..=.|+|+|..++. . -.|||+++.+.++....-+ -..+.|+..|
T Consensus 1247 --ndGv--LWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVII--N-----SEIwD~RTF~lLh~VP~Ld--qc~VtFNstG 1313 (1516)
T KOG1832|consen 1247 --NDGV--LWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVII--N-----SEIWDMRTFKLLHSVPSLD--QCAVTFNSTG 1313 (1516)
T ss_pred --eCce--eeeeccHHHHhhhhhheecccccccCCCceEEe--e-----chhhhhHHHHHHhcCcccc--ceEEEeccCc
Confidence 3553 899999888877754443334469999999998 2 2589999887766544222 2345555555
Q ss_pred CEE
Q psy10114 782 EAI 784 (819)
Q Consensus 782 ~~L 784 (819)
..+
T Consensus 1314 ~Vm 1316 (1516)
T KOG1832|consen 1314 DVM 1316 (1516)
T ss_pred cch
Confidence 443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=5e-05 Score=83.00 Aligned_cols=223 Identities=13% Similarity=0.154 Sum_probs=151.2
Q ss_pred CceEEEeecCCce-EE--EEEecCCCCeEEEEeC--CceeeeccC---CCeEEEEECCCC--CccceEEEecccCCeEEE
Q psy10114 576 HGYVQVWDVSVAK-QV--HKLVGHTARVGALAWN--GDMLSSGSR---DRMILQRDVRTP--NSQSERRLVGHRQEVCGL 645 (819)
Q Consensus 576 DGtI~IWDl~tgk-~i--~tl~gHs~~V~sLawn--g~~LaSGS~---DGtI~IWDi~t~--~~~~v~~l~gH~~~VtsL 645 (819)
+.-|.+|++++.+ .+ ...-.+.+..+-|+|+ ++.|.++.. +|.|..|.++.. ....+.........-+-+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 3569999987432 11 1222456677788885 446777654 577877777653 322222222223344889
Q ss_pred EECCCCCEEEEEEC-CCeEEEEECCC-CceeE--EEecCCCC----------EEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 646 KWSPDNQYLASGGN-DNRLYVWNLHS-MSPLQ--TYTEHLAA----------VKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 646 afSpdg~~LaSGS~-DGtI~IWDl~t-~~~i~--t~~~h~~~----------VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
+++++|++++++.. .|.|.++-++. |.... ....|.+. +-...+.|++++++++.- .-..|.+|
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL--G~Dri~~y 172 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL--GTDRIFLY 172 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec--CCceEEEE
Confidence 99999999988764 57899999865 43221 22234444 788899999998888765 34578899
Q ss_pred ECCCCceeE----EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC-cEEEEEecC---------CCCEEEEEE
Q psy10114 712 NTLTGQPMQ----CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL-TQVAKLTGH---------SYRVLYLAM 777 (819)
Q Consensus 712 Dl~tg~~v~----~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~-k~l~sl~gH---------~~~VtsLaf 777 (819)
++..|+... .+..+.....|+|+|++++.+++ ..-+++|.+|++... ..+..++.+ ......+.+
T Consensus 173 ~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v-~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhi 251 (346)
T COG2706 173 DLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLV-NELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHI 251 (346)
T ss_pred EcccCccccccccccCCCCCcceEEEcCCCcEEEEE-eccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEE
Confidence 999776532 33567888999999999999987 567899999999863 444444322 335677889
Q ss_pred ecCCCEEEEEeC-CCcEEEEECCCC
Q psy10114 778 SPDGEAIVTGAG-DETLRFWNVFSK 801 (819)
Q Consensus 778 SpDG~~LaSGS~-DGtIrIWdl~s~ 801 (819)
++||++|.++.. ...|-++.+...
T Consensus 252 s~dGrFLYasNRg~dsI~~f~V~~~ 276 (346)
T COG2706 252 SPDGRFLYASNRGHDSIAVFSVDPD 276 (346)
T ss_pred CCCCCEEEEecCCCCeEEEEEEcCC
Confidence 999999987643 347777877643
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.1e-05 Score=80.89 Aligned_cols=233 Identities=13% Similarity=0.173 Sum_probs=139.0
Q ss_pred cCCeEEEEECCCeEEEEEcCCC--ceEEEEeccCC-CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec---
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTS--QVTRLCDLSAD-GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG--- 595 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg--~~~~l~~l~~h-~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g--- 595 (819)
+.+.++++-.|.+|.|-...+. .....+++... .-.=+-++||||+..||.+...|+|+++|+.... +..+..
T Consensus 7 ~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~~~ 85 (282)
T PF15492_consen 7 SDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPPAMS 85 (282)
T ss_pred CCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCcccc
Confidence 3467888889999999988654 23333444322 3345779999999999999999999999987533 333321
Q ss_pred ----CCCCeEEEEe-----C---CceeeeccCCCeEEEEECCCCC---ccce--EEEe-cccCCeEEEEECCCCCEEEEE
Q psy10114 596 ----HTARVGALAW-----N---GDMLSSGSRDRMILQRDVRTPN---SQSE--RRLV-GHRQEVCGLKWSPDNQYLASG 657 (819)
Q Consensus 596 ----Hs~~V~sLaw-----n---g~~LaSGS~DGtI~IWDi~t~~---~~~v--~~l~-gH~~~VtsLafSpdg~~LaSG 657 (819)
-...|..+.| + ...|++-..+|.++-+-+..+. -+.. ..+. .+...|.++.++|..++|++|
T Consensus 86 ~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVg 165 (282)
T PF15492_consen 86 FPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVG 165 (282)
T ss_pred cCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEe
Confidence 2345667777 1 2256677778887777653321 1111 2222 246789999999999988888
Q ss_pred ECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC------CeEEEEECCCCceeEE-EcCCCCeEE
Q psy10114 658 GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD------RCIRFWNTLTGQPMQC-VDTGSQVCN 730 (819)
Q Consensus 658 S~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D------gtIrIWDl~tg~~v~~-l~~~s~V~s 730 (819)
|.... +++. -++....+++-..-.+..+..-+.. ..| .+-.+|.+-+.+.... ......|..
T Consensus 166 G~~~~------~~~~----s~a~~~GLtaWRiL~~~Pyyk~v~~-~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~k 234 (282)
T PF15492_consen 166 GCEQN------QDGM----SKASSCGLTAWRILSDSPYYKQVTS-SEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFK 234 (282)
T ss_pred ccCCC------CCcc----ccccccCceEEEEcCCCCcEEEccc-cCccccccccccceeeccceeeeeccccCCCceEE
Confidence 75422 0000 0011122222222111111111100 011 1122333332222111 124567999
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH 768 (819)
|..||||+.|++++ .+|.|.+|++++.++..+..-+
T Consensus 235 mSlSPdg~~La~ih--~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 235 MSLSPDGSLLACIH--FSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred EEECCCCCEEEEEE--cCCeEEEEecCcchhhcccchh
Confidence 99999999999954 7899999999998888776543
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.2e-06 Score=96.19 Aligned_cols=159 Identities=16% Similarity=0.224 Sum_probs=116.9
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCce----eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP----LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
......+++++++|++..+....+++...... ...... ...-+++.|..+....+++-.......+.+|....+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v-~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~ 143 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCV-PKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR 143 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeec-ccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence 34455678888999998888877777755432 222221 2222444444444444443322256677777777777
Q ss_pred eeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 718 PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 718 ~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
+...+.|-+-+..++|+||++++++ ++.|..|++-.++.--.+..+- ||..-|..++.-++ ..|++||+|++|++|
T Consensus 144 ~~~~lGhvSml~dVavS~D~~~Iit--aDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~W 220 (390)
T KOG3914|consen 144 CEPILGHVSMLLDVAVSPDDQFIIT--ADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLW 220 (390)
T ss_pred cchhhhhhhhhheeeecCCCCEEEE--ecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEE
Confidence 7778888899999999999999999 8899999999998766666554 79999999998754 568999999999999
Q ss_pred ECCCCcee
Q psy10114 797 NVFSKVRS 804 (819)
Q Consensus 797 dl~s~~~~ 804 (819)
|+.+++..
T Consensus 221 d~~sgk~L 228 (390)
T KOG3914|consen 221 DITSGKLL 228 (390)
T ss_pred ecccCCcc
Confidence 99998875
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.4e-05 Score=83.27 Aligned_cols=249 Identities=11% Similarity=0.089 Sum_probs=158.4
Q ss_pred ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC-CceEEEEEec-CCCCeEEEEeCCceeeeccCCCeEEE
Q psy10114 544 QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS-VAKQVHKLVG-HTARVGALAWNGDMLSSGSRDRMILQ 621 (819)
Q Consensus 544 ~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~-tgk~i~tl~g-Hs~~V~sLawng~~LaSGS~DGtI~I 621 (819)
...++.++.+| |+|--.- .++.-+....+|.=.+|.++ +|+-++.-.. |.--...+.-+|..++- +..|.|.+
T Consensus 217 tFeK~vdl~~~---vS~PmIV-~~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFtdYY~R~~nsDGkrIvF-q~~GdIyl 291 (668)
T COG4946 217 TFEKFVDLDGN---VSSPMIV-GERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFTDYYPRNANSDGKRIVF-QNAGDIYL 291 (668)
T ss_pred ceeeeeecCCC---cCCceEE-cceEEEEecccCccceEEeccCCchhhhcCCchhccccccCCCCcEEEE-ecCCcEEE
Confidence 45666666655 3332222 13333344455555555443 2333332211 11111222224554433 44578999
Q ss_pred EECCCCCccceEEE---e---cccCCeEE---EE-ECC-CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEc
Q psy10114 622 RDVRTPNSQSERRL---V---GHRQEVCG---LK-WSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWS 690 (819)
Q Consensus 622 WDi~t~~~~~v~~l---~---gH~~~Vts---La-fSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafS 690 (819)
+|..+.....+..- . .....+.- +. |++ +|.+++..|. |+..+.+...+-.++. ++.+.|.-..+.
T Consensus 292 ydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~iqv--~~~~~VrY~r~~ 368 (668)
T COG4946 292 YDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSIQV--GKKGGVRYRRIQ 368 (668)
T ss_pred eCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeEEc--CCCCceEEEEEc
Confidence 99887653211100 0 00011111 11 333 6888888876 6788877665544433 467778888888
Q ss_pred CCCCeEEEEEccCCCC-eEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC
Q psy10114 691 PHHHGLLASGGGTADR-CIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS 769 (819)
Q Consensus 691 Pdg~~LLaSGgGs~Dg-tIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~ 769 (819)
.+++.++. | +.|| .+-++|.++++.......-+.|.++..+++|+.+++ +.....+.+.|+.++.....-+...
T Consensus 369 ~~~e~~vi-g--t~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vv--aNdr~el~vididngnv~~idkS~~ 443 (668)
T COG4946 369 VDPEGDVI-G--TNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVV--ANDRFELWVIDIDNGNVRLIDKSEY 443 (668)
T ss_pred cCCcceEE-e--ccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEE--EcCceEEEEEEecCCCeeEeccccc
Confidence 88775544 3 4787 899999999987776677788999999999999998 7788899999999998765555667
Q ss_pred CCEEEEEEecCCCEEEEEeCCC----cEEEEECCCCceec
Q psy10114 770 YRVLYLAMSPDGEAIVTGAGDE----TLRFWNVFSKVRSQ 805 (819)
Q Consensus 770 ~~VtsLafSpDG~~LaSGS~DG----tIrIWdl~s~~~~~ 805 (819)
+-|+.++|+|+++++|-+--+| .|+++|+.+++...
T Consensus 444 ~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~ 483 (668)
T COG4946 444 GLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD 483 (668)
T ss_pred ceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence 7899999999999999776655 68999998876543
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.6e-05 Score=87.17 Aligned_cols=278 Identities=13% Similarity=0.087 Sum_probs=166.5
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCC----CCCeE--EEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecC
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSAD----GNSVT--SVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGH 596 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h----~~~Vt--sLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gH 596 (819)
++.+..++.++.|+-.|..+|+..-..+.... ...+. .++.. ++..+++++.+|.|.-+|.++|+.+.+....
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 56677777889999999999876433222211 00010 11111 2268888999999999999999999887643
Q ss_pred CCC-----e-EEEEeCCceeeecc---------CCCeEEEEECCCCCccceEEEeccc------------------CCe-
Q psy10114 597 TAR-----V-GALAWNGDMLSSGS---------RDRMILQRDVRTPNSQSERRLVGHR------------------QEV- 642 (819)
Q Consensus 597 s~~-----V-~sLawng~~LaSGS---------~DGtI~IWDi~t~~~~~v~~l~gH~------------------~~V- 642 (819)
... + .+....++.++.++ .+|.+...|..+++........... ..+
T Consensus 140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw 219 (488)
T cd00216 140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW 219 (488)
T ss_pred CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence 321 1 12233345555554 4688999999887744333221110 001
Q ss_pred EEEEECCCCCEEEEEECCC------------------eEEEEECCCCceeEEEecCCCCEE------EEEEc----CCCC
Q psy10114 643 CGLKWSPDNQYLASGGNDN------------------RLYVWNLHSMSPLQTYTEHLAAVK------AIAWS----PHHH 694 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~DG------------------tI~IWDl~t~~~i~t~~~h~~~Vt------sLafS----Pdg~ 694 (819)
...+..+.+..++.++.++ .|.-.|.++++.+..++....... ...+. -++.
T Consensus 220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~ 299 (488)
T cd00216 220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGK 299 (488)
T ss_pred CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCC
Confidence 1234444567777777665 799999999999888753211110 00111 1222
Q ss_pred --eEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE----------------ecCCCeEEEEEC
Q psy10114 695 --GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH----------------GYSQNQILVWKY 756 (819)
Q Consensus 695 --~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts----------------GssDg~I~IWDl 756 (819)
.+++.++ .+|.+...|.++|+.+....... ..++.+| ..+++.. ...+|.+.-.|.
T Consensus 300 ~~~~V~~g~--~~G~l~ald~~tG~~~W~~~~~~--~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~ 373 (488)
T cd00216 300 PVPAIVHAP--KNGFFYVLDRTTGKLISARPEVE--QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDP 373 (488)
T ss_pred eeEEEEEEC--CCceEEEEECCCCcEeeEeEeec--cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeC
Confidence 2444443 79999999999999987764321 1223333 3333311 124678999999
Q ss_pred CCCcEEEEEecCC--------CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 757 PTLTQVAKLTGHS--------YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 757 ~s~k~l~sl~gH~--------~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
.+++.+.+..... .+...-...-.+..|+.++.||.|+.+|..+++..-+.
T Consensus 374 ~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~ 432 (488)
T cd00216 374 KTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKF 432 (488)
T ss_pred CCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEE
Confidence 9999887765331 11111111125678888999999999999999876553
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00054 Score=72.18 Aligned_cols=211 Identities=16% Similarity=0.184 Sum_probs=137.8
Q ss_pred EEec--CCeEEEEE-CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEc-CCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 519 VDWS--SQNVLSVG-LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWN-ERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 519 ldwS--~~~LLa~g-~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafS-pdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
..|+ .+.++.+. .++.|+.|+..+++... .... ....+++. ++ ..++++..++ +.++|..+++......
T Consensus 5 p~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~----~~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~~ 77 (246)
T PF08450_consen 5 PVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLP----GPNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLAD 77 (246)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESS----SEEEEEEECTT-SEEEEEETTC-EEEEETTTTEEEEEEE
T ss_pred eEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecC----CCceEEEEccC-CEEEEEEcCc-eEEEecCCCcEEEEee
Confidence 3555 35566555 57889999998886543 3332 27778887 55 4555666555 5556998886544443
Q ss_pred c-----CCCCeEEEEe--CCceeeeccCC--------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE-EEE
Q psy10114 595 G-----HTARVGALAW--NGDMLSSGSRD--------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA-SGG 658 (819)
Q Consensus 595 g-----Hs~~V~sLaw--ng~~LaSGS~D--------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La-SGS 658 (819)
. .....+.+++ +|+..++.... |.|..++.. ++ .......-....+++|+||++.|+ +-+
T Consensus 78 ~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~---~~~~~~~~~~pNGi~~s~dg~~lyv~ds 153 (246)
T PF08450_consen 78 LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GK---VTVVADGLGFPNGIAFSPDGKTLYVADS 153 (246)
T ss_dssp EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SE---EEEEEEEESSEEEEEEETTSSEEEEEET
T ss_pred ccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-Ce---EEEEecCcccccceEECCcchheeeccc
Confidence 2 3456778888 46655554332 567777776 23 223333445678999999999775 556
Q ss_pred CCCeEEEEECCCCce----eEEE---ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-CCeEE
Q psy10114 659 NDNRLYVWNLHSMSP----LQTY---TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-SQVCN 730 (819)
Q Consensus 659 ~DGtI~IWDl~t~~~----i~t~---~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-s~V~s 730 (819)
..+.|..+|+..... ...+ ....+....+++..+|...++.. ..+.|.++|.+ |+.+..+... ..+++
T Consensus 154 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~---~~~~I~~~~p~-G~~~~~i~~p~~~~t~ 229 (246)
T PF08450_consen 154 FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW---GGGRIVVFDPD-GKLLREIELPVPRPTN 229 (246)
T ss_dssp TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE---TTTEEEEEETT-SCEEEEEE-SSSSEEE
T ss_pred ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc---CCCEEEEECCC-ccEEEEEcCCCCCEEE
Confidence 778899999853221 1222 22233478899999998555433 57899999987 8888877665 68999
Q ss_pred EEE-ccCCCEEEEEE
Q psy10114 731 LAW-SKHSSELVSTH 744 (819)
Q Consensus 731 Laf-Spdg~~Lasts 744 (819)
++| -++.+.|++++
T Consensus 230 ~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 230 CAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEESTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 999 47778888764
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.2e-05 Score=94.04 Aligned_cols=238 Identities=18% Similarity=0.262 Sum_probs=173.3
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--------C------ceeeeccCCCeEEEE
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--------G------DMLSSGSRDRMILQR 622 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--------g------~~LaSGS~DGtI~IW 622 (819)
.-.++.|++.| ++|.|+. ..|.+.|..+-+.++.+.-|...|+.+.|. . -.++++...|.|.+|
T Consensus 17 N~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~ 94 (1062)
T KOG1912|consen 17 NRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILV 94 (1062)
T ss_pred cccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEE
Confidence 35678999877 7777776 468999999999999999999999999992 1 167888889999999
Q ss_pred ECCCCCccceEEEecccCCeEEEEECC---CC-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 623 DVRTPNSQSERRLVGHRQEVCGLKWSP---DN-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 623 Di~t~~~~~v~~l~gH~~~VtsLafSp---dg-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
|..... .+..+..|.+.+..++|-+ +. ..|+.-...+.+.+|+..+|+.............|+.+.|....-++
T Consensus 95 d~~~~s--~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~ 172 (1062)
T KOG1912|consen 95 DFVLAS--VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFC 172 (1062)
T ss_pred Eehhhh--hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEE
Confidence 998865 3466778888899998866 33 46677777789999999999999888877777888999996544333
Q ss_pred EEccCCCCeEEEEECCC-------CceeEEE-cC------------CCC-------------eEEEEEccCCCEEEEEEe
Q psy10114 699 SGGGTADRCIRFWNTLT-------GQPMQCV-DT------------GSQ-------------VCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~t-------g~~v~~l-~~------------~s~-------------V~sLafSpdg~~LastsG 745 (819)
.-+ ..|.+.+-+... |+..+.. ++ +.. ...++|+|.-+.++.+
T Consensus 173 ~l~--s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi-- 248 (1062)
T KOG1912|consen 173 VLG--SKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFI-- 248 (1062)
T ss_pred EEc--cCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEE--
Confidence 332 466666665432 1221111 11 010 1236778877665553
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC--CEEEEEeCCCcEEEEECCCCc
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG--EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG--~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.-...+.++|++-...+....-..+.+.-+.+-|++ ..|..+-.||.+.+|--....
T Consensus 249 ~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~ 307 (1062)
T KOG1912|consen 249 TFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEP 307 (1062)
T ss_pred EeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccC
Confidence 246789999998888887776666666667777765 478889999999999765533
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.4e-06 Score=92.13 Aligned_cols=241 Identities=18% Similarity=0.138 Sum_probs=173.2
Q ss_pred EEecCCeEEEEECCCeEEEEEcCC-CceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceEEEEEe--
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACT-SQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVHKLV-- 594 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~i~tl~-- 594 (819)
+.--.+.+++++.||.++.|.-.. .-..-+..+..|.+.|.+++.+-+|..+++++. |..++++|+++-..+..++
T Consensus 16 ~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~ 95 (558)
T KOG0882|consen 16 FPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLV 95 (558)
T ss_pred eeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccc
Confidence 333467899999999999998765 333334456678889999999999999999887 9999999998765543332
Q ss_pred cCCCCeEEEEeCCc----eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 595 GHTARVGALAWNGD----MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 595 gHs~~V~sLawng~----~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
--.+.+..+.-.|+ .-++.-.+|.+.++|-....++....-.-|.++|..+.+++.+..+++....|.|.-|....
T Consensus 96 ~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~ 175 (558)
T KOG0882|consen 96 DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG 175 (558)
T ss_pred cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC
Confidence 12222222222342 23344567999999988877666666778999999999999999999999999999999863
Q ss_pred ------Cce---------eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-----------
Q psy10114 671 ------MSP---------LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT----------- 724 (819)
Q Consensus 671 ------~~~---------i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~----------- 724 (819)
.+. +..+...++...++.|+|++..+...+ .|..|++++.++|+.++.++.
T Consensus 176 ~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~---~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks 252 (558)
T KOG0882|consen 176 PFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLN---PDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKS 252 (558)
T ss_pred cccCccccccccccccchhhcccccccCccceEEccccCcccccC---cccEEEEEEeccchhhhhhhccchhhhhcccc
Confidence 111 111223456678999999999777665 799999999999976654421
Q ss_pred ----------------------C-CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 725 ----------------------G-SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 725 ----------------------~-s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
+ ..-..++|...|++++- |. --.|++.++.+++.+..+
T Consensus 253 ~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly--~t-~~gikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 253 PYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLY--GT-ILGIKVINLDTNTVVRIL 313 (558)
T ss_pred ccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEe--ec-ceeEEEEEeecCeEEEEe
Confidence 1 12356788888888887 32 234788888877766544
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.38 E-value=0.0001 Score=91.95 Aligned_cols=201 Identities=14% Similarity=0.220 Sum_probs=137.0
Q ss_pred CCCCeEEEEe--CCceeeeccCCCeEEEE----ECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 596 HTARVGALAW--NGDMLSSGSRDRMILQR----DVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 596 Hs~~V~sLaw--ng~~LaSGS~DGtI~IW----Di~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
..+.|.++.+ +.+.++.+..+|.|.+. |...... .....-...|.+++||||+..++..+.+|++.+-+..
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~---E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~ 150 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEI---EIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD 150 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCcee---EEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc
Confidence 3567888888 67788888999999988 5554332 3333445789999999999999999999988776421
Q ss_pred ---------------C--------CceeEEEec------------------------CCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 670 ---------------S--------MSPLQTYTE------------------------HLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 670 ---------------t--------~~~i~t~~~------------------------h~~~VtsLafSPdg~~LLaSGgG 702 (819)
. |+.-.+|.| ....-..|+|-.||++++++.-.
T Consensus 151 fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~ 230 (928)
T PF04762_consen 151 FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVE 230 (928)
T ss_pred ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEE
Confidence 0 111111111 11234578899999988777531
Q ss_pred CC---CCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCC-CeEEEEECCCCcEEEEEe----cCCCCEE
Q psy10114 703 TA---DRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQ-NQILVWKYPTLTQVAKLT----GHSYRVL 773 (819)
Q Consensus 703 s~---DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssD-g~I~IWDl~s~k~l~sl~----gH~~~Vt 773 (819)
.. -+.+|+|+-+ |+....-+. .+--.+++|.|.|+.++++....+ ..|.+|. ++|-.-.++. .....|.
T Consensus 231 ~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~ 308 (928)
T PF04762_consen 231 PETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVI 308 (928)
T ss_pred cCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceee
Confidence 12 3689999954 664443332 233467899999999999764323 3566666 4454444443 3456799
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 774 YLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.++|++|+..||..-.|. |.+|-..+-.
T Consensus 309 ~l~Wn~ds~iLAv~~~~~-vqLWt~~NYH 336 (928)
T PF04762_consen 309 ELAWNSDSEILAVWLEDR-VQLWTRSNYH 336 (928)
T ss_pred EEEECCCCCEEEEEecCC-ceEEEeeCCE
Confidence 999999999999977665 9999887644
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.4e-06 Score=92.74 Aligned_cols=158 Identities=19% Similarity=0.300 Sum_probs=109.2
Q ss_pred eEEEEEcCCCCEEEEEecCceEEEeecCCceE----EEEEecCCCCeEEEEe---CCc--eeeeccCCCeEEEEECCCCC
Q psy10114 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ----VHKLVGHTARVGALAW---NGD--MLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 558 VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~----i~tl~gHs~~V~sLaw---ng~--~LaSGS~DGtI~IWDi~t~~ 628 (819)
...+..+++++++|++..+....+++...... ..... -..+-+++.+ +.. ..-..++...+.+|....+
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~- 142 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG- 142 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeeccccc-
Confidence 34556677888888888887777777654332 22221 1222233444 322 2223445556666665542
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE-ecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY-TEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
....+.||-..++.++|+||+++++++..|..|++-....-..+..| -+|..-|..++.-++.. +.+|| -|++
T Consensus 143 --~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~--LlS~s--GD~t 216 (390)
T KOG3914|consen 143 --RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYL--LLSGS--GDKT 216 (390)
T ss_pred --CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCce--eeecC--CCCc
Confidence 23566789999999999999999999999999999776655555554 37999999999988764 45554 5999
Q ss_pred EEEEECCCCceeEEEc
Q psy10114 708 IRFWNTLTGQPMQCVD 723 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~ 723 (819)
+++||..+|+.+.+++
T Consensus 217 lr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 217 LRLWDITSGKLLDTCD 232 (390)
T ss_pred EEEEecccCCcccccc
Confidence 9999999999887664
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00013 Score=89.52 Aligned_cols=236 Identities=14% Similarity=0.228 Sum_probs=140.7
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+.++.+- ++.++.+..+|.|.+-|.++......... .+.|.+++||||+..++..+.++++.+-+ .+-..+..-
T Consensus 71 i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~v---d~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E~ 146 (1265)
T KOG1920|consen 71 IVSVQFLADTNSICVITALGDIILVDPETLELEIVGNV---DNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAEK 146 (1265)
T ss_pred eEEEEEecccceEEEEecCCcEEEEcccccceeeeeec---cCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhcc
Confidence 4445544 45688888899999999988876654333 57899999999999999999888876543 222222211
Q ss_pred e-----cCCCCeEEEEeCC-ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-----CCCe
Q psy10114 594 V-----GHTARVGALAWNG-DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-----NDNR 662 (819)
Q Consensus 594 ~-----gHs~~V~sLawng-~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-----~DGt 662 (819)
. ...+..-.+-|.. ..=+.|+. |.....+....+. ...... ..+.=+.+.|--||+++|+.. ....
T Consensus 147 ~L~~d~~~~sk~v~VGwGrkeTqfrgs~-gr~~~~~~~~~ek-~~~~~~-~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rk 223 (1265)
T KOG1920|consen 147 PLDADDERKSKFVNVGWGRKETQFRGSE-GRQAARQKIEKEK-ALEQIE-QDDHKTSISWRGDGEYFAVSFVESETGTRK 223 (1265)
T ss_pred ccccccccccccceecccccceeeecch-hhhcccccccccc-cccchh-hccCCceEEEccCCcEEEEEEEeccCCcee
Confidence 1 1122233344411 11111111 1111111111110 000001 112235688999999998832 2378
Q ss_pred EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE----cCC-CCeEEEEEccCC
Q psy10114 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV----DTG-SQVCNLAWSKHS 737 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l----~~~-s~V~sLafSpdg 737 (819)
|+|||.+ |..-..-....+--.+++|-|.|..+.+....+.|+.|.++.- +|-.-..+ ..+ ..+..++|+.++
T Consensus 224 irV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~s 301 (1265)
T KOG1920|consen 224 IRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNS 301 (1265)
T ss_pred EEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCC
Confidence 9999976 4332222222333468999999998888776667888999984 34333222 222 238999999999
Q ss_pred CEEEEEEecCCCe-EEEEECCCCc
Q psy10114 738 SELVSTHGYSQNQ-ILVWKYPTLT 760 (819)
Q Consensus 738 ~~LastsGssDg~-I~IWDl~s~k 760 (819)
..|++......+. |++|-..+..
T Consensus 302 diLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 302 DILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred CceeeeecccccceEEEEEecCeE
Confidence 9999855445555 9999887643
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.31 E-value=9.5e-06 Score=96.39 Aligned_cols=182 Identities=17% Similarity=0.250 Sum_probs=143.9
Q ss_pred CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEE
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsL 645 (819)
++..++.|+-...+..+|+.+.+..+...-..+.|.-+..++..+.+|...|+|.+.|.++-+ .+.++..|++.|.++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~--~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFE--TIHTFDAHSGSISDF 223 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCc--eeeeeeccccceeee
Confidence 455677787777888899999988888776666788899999999999999999999998865 568999999999876
Q ss_pred EECCCCCEEEEEEC---------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-
Q psy10114 646 KWSPDNQYLASGGN---------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT- 715 (819)
Q Consensus 646 afSpdg~~LaSGS~---------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t- 715 (819)
.. .|+.|+++|. |.-|+|||++..+.+.-+.-+.++ .-+.|+|.-...++..+ ..|...+-|..+
T Consensus 224 Dv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S--~sGq~q~vd~~~l 298 (1118)
T KOG1275|consen 224 DV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTS--QSGQFQFVDTATL 298 (1118)
T ss_pred ec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEe--cccceeecccccc
Confidence 65 6899999885 445899999988776666555554 56788887666666554 788999988432
Q ss_pred Cce---eEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 716 GQP---MQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 716 g~~---v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
+.+ +..+ ..++.+..+++|++|+.++. |..+|.|.+|.-
T Consensus 299 sNP~~~~~~v~p~~s~i~~fDiSsn~~alaf--gd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 299 SNPPAGVKMVNPNGSGISAFDISSNGDALAF--GDHEGHVNLWAD 341 (1118)
T ss_pred CCCccceeEEccCCCcceeEEecCCCceEEE--ecccCcEeeecC
Confidence 111 2223 34566999999999999999 999999999973
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.1e-05 Score=83.74 Aligned_cols=255 Identities=15% Similarity=0.166 Sum_probs=159.5
Q ss_pred EEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC---Ccee
Q psy10114 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---GDML 610 (819)
Q Consensus 535 V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~L 610 (819)
|+..+..+-+.. .-+..+...|.+++|||..+ ++..++.+..|+|.|+++...+..+..+ ..+++++|+ .+.+
T Consensus 175 v~~l~~~~fkss--q~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~I 251 (463)
T KOG1645|consen 175 VQKLESHDFKSS--QILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVI 251 (463)
T ss_pred eEEeccCCcchh--hcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCccee
Confidence 555554443332 23566788999999999876 7888999999999999999999999888 889999994 5689
Q ss_pred eeccCCCeEEEEECCCCCccceEEEec--ccCCeEEEEE------CCCCCEEEEEECCCeEEEEECCCC--ceeEEE-ec
Q psy10114 611 SSGSRDRMILQRDVRTPNSQSERRLVG--HRQEVCGLKW------SPDNQYLASGGNDNRLYVWNLHSM--SPLQTY-TE 679 (819)
Q Consensus 611 aSGS~DGtI~IWDi~t~~~~~v~~l~g--H~~~VtsLaf------Spdg~~LaSGS~DGtI~IWDl~t~--~~i~t~-~~ 679 (819)
..|...|.|.++|++.++... ..+.+ ...+|..++. .+.|..++....+ +..|++... ...... .+
T Consensus 252 YaGl~nG~VlvyD~R~~~~~~-~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele 328 (463)
T KOG1645|consen 252 YAGLQNGMVLVYDMRQPEGPL-MELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELE 328 (463)
T ss_pred EEeccCceEEEEEccCCCchH-hhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccC
Confidence 999999999999999876432 22222 2234444433 2334445444443 455554322 111111 13
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCC---eEE----EEECCCCceeEEEcC---CCCe-----E-EEEEccCCCEEEEE
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADR---CIR----FWNTLTGQPMQCVDT---GSQV-----C-NLAWSKHSSELVST 743 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~Dg---tIr----IWDl~tg~~v~~l~~---~s~V-----~-sLafSpdg~~Last 743 (819)
..+...+++.++..+.++++.- .+. +++ --|..+|.++..... ++.- . .+.-.++.+.++..
T Consensus 329 ~pG~cismqy~~~snh~l~tyR--s~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~ 406 (463)
T KOG1645|consen 329 PPGICISMQYHGVSNHLLLTYR--SNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVV 406 (463)
T ss_pred CCcceeeeeecCccceEEEEec--CCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEe
Confidence 4566777778887777877753 110 111 122233433322210 1111 1 12223455555554
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec-C-CCEEEEEeCCCcEEEEECCC
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP-D-GEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp-D-G~~LaSGS~DGtIrIWdl~s 800 (819)
|++.+.+.+||..+++.+.++.-. .+|.+++... + +.+|++-. |..++|+..++
T Consensus 407 -gd~tn~lil~D~~s~evvQ~l~~~-epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~es 462 (463)
T KOG1645|consen 407 -GDSTNELILQDPHSFEVVQTLALS-EPVLDICPNDTNGSSYLALLT-DDRVHIYKNES 462 (463)
T ss_pred -cCCcceeEEeccchhheeeecccC-cceeecceeecCCcchhhhee-cceEEEEecCC
Confidence 778899999999999999988744 7788877644 3 34565544 56888887654
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.3e-05 Score=84.09 Aligned_cols=233 Identities=13% Similarity=0.187 Sum_probs=137.0
Q ss_pred eEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE------------ecCC--CCeEEEEeCCceeeeccCCCeEEEEE
Q psy10114 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL------------VGHT--ARVGALAWNGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 558 VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl------------~gHs--~~V~sLawng~~LaSGS~DGtI~IWD 623 (819)
++.+.++. ...|+++..++.+......++.++... ..|+ ++......-++.++++..||.+.+++
T Consensus 39 ~~~~~~v~-~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s 117 (319)
T KOG4714|consen 39 LSKVSLSA-EYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFS 117 (319)
T ss_pred EEEeechh-hheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEe
Confidence 56666654 346777777777666655444433222 2222 22233333467899999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-----CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-----DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-----DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
.+..- ....+...-...-.+.+....++.+.+++- -+..+.|+++..+....-......|.+++-+|.++.+++
T Consensus 118 ~~~~~-~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~ 196 (319)
T KOG4714|consen 118 TDKDL-ALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVC 196 (319)
T ss_pred chHHH-hhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEE
Confidence 87621 111222111111122223334454544332 124566666543322222223345999999999999999
Q ss_pred EEccCCCCeEEEEECCCCceeEEE--cCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCCcEEEEE---ecC----
Q psy10114 699 SGGGTADRCIRFWNTLTGQPMQCV--DTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTLTQVAKL---TGH---- 768 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~tg~~v~~l--~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~k~l~sl---~gH---- 768 (819)
+|+ .||.+.+||.++......+ .+...++.+-|+| ++..|++ .++||.+..||..+ +.+..- .++
T Consensus 197 cgt--~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft--~sedGslw~wdas~-~~l~i~~~~s~~s~WL 271 (319)
T KOG4714|consen 197 CGT--DDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFT--CSEDGSLWHWDAST-TFLSISNQASVISSWL 271 (319)
T ss_pred Eec--CCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeE--ecCCCcEEEEcCCC-ceEEecCccccccccc
Confidence 976 9999999999987433222 4678899999998 4566777 67999999999753 222100 000
Q ss_pred -CCCEEE--------------E-EEecCCCEEEEEeCCCcEEEEE
Q psy10114 769 -SYRVLY--------------L-AMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 769 -~~~Vts--------------L-afSpDG~~LaSGS~DGtIrIWd 797 (819)
.++|.+ + .|.--|..|++|+.-+.|++.+
T Consensus 272 sgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 272 SGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence 111111 1 1333477899998888888765
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00094 Score=71.44 Aligned_cols=230 Identities=13% Similarity=0.147 Sum_probs=129.8
Q ss_pred EEEcCCCCEEEEEecCceEEEeecCCc--eEEEEEe---cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 561 VAWNERGNLVAVGTHHGYVQVWDVSVA--KQVHKLV---GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 561 LafSpdG~~LAsGs~DGtI~IWDl~tg--k~i~tl~---gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
++.+.+|+.||+-. |..|.|=..++. ..+.+.+ .....=..++| ++..||.+...|+|+++|+...+...+.
T Consensus 3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~ 81 (282)
T PF15492_consen 3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIP 81 (282)
T ss_pred eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcC
Confidence 56678898888765 456777655432 2222222 23334567888 5669999999999999999864321110
Q ss_pred ----EEecccCCeEEEEECCCC------CEEEEEECCCeEEEEECCC-----CceeEEEe--c-CCCCEEEEEEcCCCCe
Q psy10114 634 ----RLVGHRQEVCGLKWSPDN------QYLASGGNDNRLYVWNLHS-----MSPLQTYT--E-HLAAVKAIAWSPHHHG 695 (819)
Q Consensus 634 ----~l~gH~~~VtsLafSpdg------~~LaSGS~DGtI~IWDl~t-----~~~i~t~~--~-h~~~VtsLafSPdg~~ 695 (819)
....-...|.++.|.+.. ..|++-..+|.++-|-+.. .+....|. . ....|.++.++|..+.
T Consensus 82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~L 161 (282)
T PF15492_consen 82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRL 161 (282)
T ss_pred cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCE
Confidence 011123567788775522 2466667788777666532 22333333 2 4678999999999876
Q ss_pred EEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC------eEEEEECCCCcEEEEEecCC
Q psy10114 696 LLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN------QILVWKYPTLTQVAKLTGHS 769 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg------~I~IWDl~s~k~l~sl~gH~ 769 (819)
+++.|. ....-.... .....+++-..-.+..+...+...+|+ +-.+|.+.+.+.........
T Consensus 162 LlVgG~--~~~~~~~s~----------a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 229 (282)
T PF15492_consen 162 LLVGGC--EQNQDGMSK----------ASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQ 229 (282)
T ss_pred EEEecc--CCCCCcccc----------ccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCC
Confidence 665543 222100000 011112221111111111111111111 22344444333322222346
Q ss_pred CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 770 YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 770 ~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
..|..|..||||+.||+...+|.|.+|++-+-+.
T Consensus 230 d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~ 263 (282)
T PF15492_consen 230 DGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRL 263 (282)
T ss_pred CceEEEEECCCCCEEEEEEcCCeEEEEecCcchh
Confidence 6799999999999999999999999999976544
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.6e-05 Score=90.75 Aligned_cols=185 Identities=12% Similarity=0.197 Sum_probs=133.2
Q ss_pred CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEE
Q psy10114 606 NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK 685 (819)
Q Consensus 606 ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~Vt 685 (819)
+++.++.|+-...+..+|+++.... +...-....|.-+. .+++.+.+|...|+|.+-|.++.+.++++..|.+.|.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~--r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siS 221 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKET--RTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSIS 221 (1118)
T ss_pred CCcceeecchhhheeeeecccceee--eeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeecccccee
Confidence 5667888888888989999886532 22222233455555 3578999999999999999999999999999999998
Q ss_pred EEEEcCCCCeEEEEEc------cCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC--
Q psy10114 686 AIAWSPHHHGLLASGG------GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP-- 757 (819)
Q Consensus 686 sLafSPdg~~LLaSGg------Gs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~-- 757 (819)
++.. .|+.++++|- -..|..|++||++.-+.+.-+.......-+.|.|.-..-+++ .+..|+..+-|..
T Consensus 222 DfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V-~S~sGq~q~vd~~~l 298 (1118)
T KOG1275|consen 222 DFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAV-TSQSGQFQFVDTATL 298 (1118)
T ss_pred eeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEE-Eecccceeecccccc
Confidence 7655 5665666552 125778999999987776655544444556777765443333 4567888888832
Q ss_pred -CC-cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 758 -TL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 758 -s~-k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
+. ..+..+......+..+++|++|+.++.|..+|.|.+|.
T Consensus 299 sNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 299 SNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 22 11222333344599999999999999999999999998
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.7e-06 Score=90.95 Aligned_cols=149 Identities=23% Similarity=0.234 Sum_probs=118.1
Q ss_pred EEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc-----eEEEEEecCCCCeE
Q psy10114 527 LSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA-----KQVHKLVGHTARVG 601 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg-----k~i~tl~gHs~~V~ 601 (819)
+++|.+..|-+-|.++|-... +. ..+.|.++.|...++++..|..+|.|...|+..+ .+... --|...|+
T Consensus 228 fs~G~sqqv~L~nvetg~~qs---f~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-lyh~Ssvt 302 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQS---FQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LYHDSSVT 302 (425)
T ss_pred ecccccceeEEEEeecccccc---cc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE-EEcCcchh
Confidence 778999999999999985432 33 4678999999999999999999999999999754 22333 34888888
Q ss_pred EEEe---CCceeeeccCCCeEEEEECCCCCc-cceEEEecccCCeEEEE--ECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 602 ALAW---NGDMLSSGSRDRMILQRDVRTPNS-QSERRLVGHRQEVCGLK--WSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 602 sLaw---ng~~LaSGS~DGtI~IWDi~t~~~-~~v~~l~gH~~~VtsLa--fSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
++.. ++..|.+.+.+|.|++||.+.-+. ..+....||...-.-+- ..+....++++++|.-.+||.++.+..+.
T Consensus 303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 303 SLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred hhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceee
Confidence 8765 788999999999999999987553 34677888866544333 35567789999999999999999999888
Q ss_pred EEecC
Q psy10114 676 TYTEH 680 (819)
Q Consensus 676 t~~~h 680 (819)
++.-.
T Consensus 383 tipf~ 387 (425)
T KOG2695|consen 383 TIPFP 387 (425)
T ss_pred ccCCC
Confidence 77643
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.1e-05 Score=86.17 Aligned_cols=204 Identities=14% Similarity=0.290 Sum_probs=137.8
Q ss_pred CCCeEEEEeC--CceeeeccCCCeEEEEECCCCC---ccceEEEeccc------------CCeEEEEECCCC--CEEEEE
Q psy10114 597 TARVGALAWN--GDMLSSGSRDRMILQRDVRTPN---SQSERRLVGHR------------QEVCGLKWSPDN--QYLASG 657 (819)
Q Consensus 597 s~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~---~~~v~~l~gH~------------~~VtsLafSpdg--~~LaSG 657 (819)
...|+++.|+ |.++++|...|.|.++.-.... ......+++|. ..|..+.|..++ ..++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 4567889994 7899999999999999765433 11223345554 347788887654 367888
Q ss_pred ECCCeEEEEECCCCc-------------------e-----------------------eEEE-ecCCCCEEEEEEcCCCC
Q psy10114 658 GNDNRLYVWNLHSMS-------------------P-----------------------LQTY-TEHLAAVKAIAWSPHHH 694 (819)
Q Consensus 658 S~DGtI~IWDl~t~~-------------------~-----------------------i~t~-~~h~~~VtsLafSPdg~ 694 (819)
++|.+|++|.+.... + .+.+ ..|..-+.++.+..|.+
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 999999999875431 0 0111 24666788999999998
Q ss_pred eEEEEEccCCCCeEEEEECCCCce-eEE--Ec-C-----CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc-----
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQP-MQC--VD-T-----GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT----- 760 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~~-v~~--l~-~-----~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k----- 760 (819)
.++.+ .|=.|.+|++.--.. ... +. + ..-|++..|+|....++.- .++.|.|++-|++...
T Consensus 186 t~lSa----DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmY-SsSkG~Ikl~DlRq~alcdn~ 260 (460)
T COG5170 186 TLLSA----DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMY-SSSKGEIKLNDLRQSALCDNS 260 (460)
T ss_pred eeeec----cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEE-ecCCCcEEehhhhhhhhccCc
Confidence 77764 688999999875322 111 21 1 1347888999976655554 4678999999987321
Q ss_pred -EEEEE----------ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 761 -QVAKL----------TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 761 -~l~sl----------~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.+... .+-...|..+.|+++|+++++-+. -+|++||+...+...+
T Consensus 261 ~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pik 316 (460)
T COG5170 261 KKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIK 316 (460)
T ss_pred hhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCce
Confidence 11111 122346888999999999987654 5899999987654433
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00075 Score=73.73 Aligned_cols=204 Identities=14% Similarity=0.154 Sum_probs=136.2
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-----cCceEEEeecC-CceEEEEEecCCCCeEEEEe-
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-----HHGYVQVWDVS-VAKQVHKLVGHTARVGALAW- 605 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-----~DGtI~IWDl~-tgk~i~tl~gHs~~V~sLaw- 605 (819)
.-..+||..+++......-.....---.-.||+||++|++.- ..|.|-|||.. +-+.+.++..|.-.-..+.+
T Consensus 28 ~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~ 107 (305)
T PF07433_consen 28 TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLM 107 (305)
T ss_pred cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEc
Confidence 447789999888765433221111122468999999999864 35899999998 66788888876655556666
Q ss_pred -CCceeeecc------------------CCCeEEEEECCCCCccceEEE--ecccCCeEEEEECCCCCEEEEEECCCe--
Q psy10114 606 -NGDMLSSGS------------------RDRMILQRDVRTPNSQSERRL--VGHRQEVCGLKWSPDNQYLASGGNDNR-- 662 (819)
Q Consensus 606 -ng~~LaSGS------------------~DGtI~IWDi~t~~~~~v~~l--~gH~~~VtsLafSpdg~~LaSGS~DGt-- 662 (819)
+++.|+++. .+-++...|..+++......+ ..|...|.-+++.++|..++..-..|.
T Consensus 108 pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~ 187 (305)
T PF07433_consen 108 PDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPG 187 (305)
T ss_pred CCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCC
Confidence 554555542 233555666677664444445 447788999999999876655443332
Q ss_pred -----EEEEECCCCceeEEEe-------cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEE
Q psy10114 663 -----LYVWNLHSMSPLQTYT-------EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN 730 (819)
Q Consensus 663 -----I~IWDl~t~~~i~t~~-------~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~s 730 (819)
|.+++. ++.+..+. .-.+.+-+|++++++..+++++- ..+.+.+||..+++.+..... ..+|.
T Consensus 188 ~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsP--rGg~~~~~d~~tg~~~~~~~l-~D~cG 262 (305)
T PF07433_consen 188 DAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSP--RGGRVAVWDAATGRLLGSVPL-PDACG 262 (305)
T ss_pred ccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECC--CCCEEEEEECCCCCEeecccc-Cceee
Confidence 334433 33233332 23467899999999998888875 889999999999998766543 45677
Q ss_pred EEEccCCCEEEE
Q psy10114 731 LAWSKHSSELVS 742 (819)
Q Consensus 731 LafSpdg~~Las 742 (819)
++-.+++ ++++
T Consensus 263 va~~~~~-f~~s 273 (305)
T PF07433_consen 263 VAPTDDG-FLVS 273 (305)
T ss_pred eeecCCc-eEEe
Confidence 7777776 4444
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.15 E-value=7.2e-06 Score=61.34 Aligned_cols=39 Identities=36% Similarity=0.647 Sum_probs=36.9
Q ss_pred CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 759 LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
++++.++.+|.+.|.+++|+|++++|++|+.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.8e-06 Score=88.94 Aligned_cols=160 Identities=20% Similarity=0.269 Sum_probs=116.6
Q ss_pred EEEEcC--CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc--cceE
Q psy10114 560 SVAWNE--RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS--QSER 633 (819)
Q Consensus 560 sLafSp--dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~--~~v~ 633 (819)
.++|+- .|-++++|. +-.|-+-|+++|-... +. .++.|.++.| .++.+..|.++|.|...|++.... ....
T Consensus 216 ~CawSlni~gyhfs~G~-sqqv~L~nvetg~~qs-f~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a 292 (425)
T KOG2695|consen 216 SCAWSLNIMGYHFSVGL-SQQVLLTNVETGHQQS-FQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCA 292 (425)
T ss_pred hhhhhhccceeeecccc-cceeEEEEeecccccc-cc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcce
Confidence 346664 344544444 5568888988775332 22 5678888888 478999999999999999987521 1123
Q ss_pred EEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCce---eEEEecCCCCEEEEEE--cCCCCeEEEEEccCCCCe
Q psy10114 634 RLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSP---LQTYTEHLAAVKAIAW--SPHHHGLLASGGGTADRC 707 (819)
Q Consensus 634 ~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~---i~t~~~h~~~VtsLaf--SPdg~~LLaSGgGs~Dgt 707 (819)
...-|...|+++..-. ++++|.+.+.+|+|++||.+.-++ +.++.+|...-.-+-+ .+... +++++| .|..
T Consensus 293 ~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg-~I~s~G--dDcy 369 (425)
T KOG2695|consen 293 QRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEG-SIFSVG--DDCY 369 (425)
T ss_pred EEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccc-eEEEcc--CeeE
Confidence 3345889999998766 788999999999999999987776 8888888654433333 44444 444455 8999
Q ss_pred EEEEECCCCceeEEEcCC
Q psy10114 708 IRFWNTLTGQPMQCVDTG 725 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~~ 725 (819)
.|||.++.|..+.++...
T Consensus 370 tRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 370 TRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred EEEEecccCceeeccCCC
Confidence 999999999999888654
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0037 Score=72.58 Aligned_cols=90 Identities=19% Similarity=0.259 Sum_probs=72.2
Q ss_pred EEEECCCCce----eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEE
Q psy10114 709 RFWNTLTGQP----MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAI 784 (819)
Q Consensus 709 rIWDl~tg~~----v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~L 784 (819)
.+|+...++. +..+..++++.+++++|+.+.++. |..||.|.+||...+.. ......-.++.++|+|+|..+
T Consensus 239 ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvl--GC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~ 314 (545)
T PF11768_consen 239 CIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVL--GCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIF 314 (545)
T ss_pred EEEEeecCceeEEEEEEEecCCcceEEecCcccceEEE--EecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEE
Confidence 4566655432 344577899999999999999999 89999999999876533 333445668999999999999
Q ss_pred EEEeCCCcEEEEECCCCc
Q psy10114 785 VTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 785 aSGS~DGtIrIWdl~s~~ 802 (819)
++|+..|.+.+||+.-..
T Consensus 315 ~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 315 VVGSEQGELQCFDMALSP 332 (545)
T ss_pred EEEcCCceEEEEEeecCc
Confidence 999999999999997543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.003 Score=69.15 Aligned_cols=230 Identities=17% Similarity=0.174 Sum_probs=155.2
Q ss_pred CeEEEEEcC-CCCEEEEEecCce-EEEeecCCceEEEEEecCCCCeE--EEEe--CCceeeecc-----CCCeEEEEECC
Q psy10114 557 SVTSVAWNE-RGNLVAVGTHHGY-VQVWDVSVAKQVHKLVGHTARVG--ALAW--NGDMLSSGS-----RDRMILQRDVR 625 (819)
Q Consensus 557 ~VtsLafSp-dG~~LAsGs~DGt-I~IWDl~tgk~i~tl~gHs~~V~--sLaw--ng~~LaSGS-----~DGtI~IWDi~ 625 (819)
....++.+| ++..++.+-.-|+ ..+||..+++....+....++-. .-.| +|++|++.- ..|.|-+||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 445688888 5667777777665 67899999998887765444432 2344 677887754 45899999998
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEEC------------------CCeEEEEECCCCceeEEEe----cCCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN------------------DNRLYVWNLHSMSPLQTYT----EHLAA 683 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~------------------DGtI~IWDl~t~~~i~t~~----~h~~~ 683 (819)
. ....+..+..|.-.-..+.+.|||+.|+++.. +-.+...|..+|+.+.+.. .|+..
T Consensus 86 ~-~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lS 164 (305)
T PF07433_consen 86 R-GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLS 164 (305)
T ss_pred C-CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccc
Confidence 3 33456677777777778899999988777532 2346667788888777633 47889
Q ss_pred EEEEEEcCCCCeEEEEEc-cC-CC--CeEEEEECCCCceeEEEc--------CCCCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 684 VKAIAWSPHHHGLLASGG-GT-AD--RCIRFWNTLTGQPMQCVD--------TGSQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 684 VtsLafSPdg~~LLaSGg-Gs-~D--gtIrIWDl~tg~~v~~l~--------~~s~V~sLafSpdg~~LastsGssDg~I 751 (819)
|..+++.++|..+++.-- |. .+ --+-+++ .++.+..+. ....+-+|++++++..++++ +-.-+.+
T Consensus 165 iRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~t-sPrGg~~ 241 (305)
T PF07433_consen 165 IRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVT-SPRGGRV 241 (305)
T ss_pred eeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEE-CCCCCEE
Confidence 999999999874443210 00 01 1233333 233333332 24679999999999998886 4567899
Q ss_pred EEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 752 LVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
.+||..+++.+....- ..+..++-.+++ +++| +..|.+.
T Consensus 242 ~~~d~~tg~~~~~~~l--~D~cGva~~~~~-f~~s-sG~G~~~ 280 (305)
T PF07433_consen 242 AVWDAATGRLLGSVPL--PDACGVAPTDDG-FLVS-SGQGQLI 280 (305)
T ss_pred EEEECCCCCEeecccc--CceeeeeecCCc-eEEe-CCCccEE
Confidence 9999999998876543 346777777776 5554 4455543
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.0016 Score=76.21 Aligned_cols=232 Identities=13% Similarity=0.139 Sum_probs=143.3
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCC---CCeE-EEEEcCCCCEEEEEe---------cCceEEEeecCCceEE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADG---NSVT-SVAWNERGNLVAVGT---------HHGYVQVWDVSVAKQV 590 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~---~~Vt-sLafSpdG~~LAsGs---------~DGtI~IWDl~tgk~i 590 (819)
+.++.++.++.|+-+|.++|+..-..+...+. ..+. +..+. +..+++|+ .+|.+..+|.++|+.+
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~ 188 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLL 188 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCcee
Confidence 78888889999999999999876444433221 0011 11222 34566664 3688999999999988
Q ss_pred EEEecCCC--------------------CeE-EEEe--CCceeeeccCCC------------------eEEEEECCCCCc
Q psy10114 591 HKLVGHTA--------------------RVG-ALAW--NGDMLSSGSRDR------------------MILQRDVRTPNS 629 (819)
Q Consensus 591 ~tl~gHs~--------------------~V~-sLaw--ng~~LaSGS~DG------------------tI~IWDi~t~~~ 629 (819)
...+.... .+. +.+. .++.++.++.++ .+.-.|.++++.
T Consensus 189 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~ 268 (488)
T cd00216 189 WRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKV 268 (488)
T ss_pred eEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCE
Confidence 87754211 011 1233 356677776554 788899988875
Q ss_pred cceEEEecccC---------CeEEEEECCCCC---EEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEE
Q psy10114 630 QSERRLVGHRQ---------EVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 630 ~~v~~l~gH~~---------~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LL 697 (819)
.-......|.. .+..+. .-++. .++.++.+|.+...|.++|+.+....... ..++.+| ..++
T Consensus 269 ~W~~~~~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~~~~--~~vy 342 (488)
T cd00216 269 KWFYQTTPHDLWDYDGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMAYDP--GLVY 342 (488)
T ss_pred EEEeeCCCCCCcccccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec---cccccCC--ceEE
Confidence 44333222211 011111 11333 57788889999999999999988765321 1233344 2233
Q ss_pred EEEc---------------cCCCCeEEEEECCCCceeEEEcCC---------CCe--EEEEEccCCCEEEEEEecCCCeE
Q psy10114 698 ASGG---------------GTADRCIRFWNTLTGQPMQCVDTG---------SQV--CNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 698 aSGg---------------Gs~DgtIrIWDl~tg~~v~~l~~~---------s~V--~sLafSpdg~~LastsGssDg~I 751 (819)
+... ...++.+.-.|..+|+.+.+.... ... ..+. -.+..+++ |+.||.+
T Consensus 343 v~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~--g~~dG~l 418 (488)
T cd00216 343 LGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFA--GAADGYF 418 (488)
T ss_pred EccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE--ecCCeEEE--ECCCCeE
Confidence 2110 124688999999999988777554 111 1122 24566777 7789999
Q ss_pred EEEECCCCcEEEEEec
Q psy10114 752 LVWKYPTLTQVAKLTG 767 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~g 767 (819)
..+|..+|+.+.+.+-
T Consensus 419 ~ald~~tG~~lW~~~~ 434 (488)
T cd00216 419 RAFDATTGKELWKFRT 434 (488)
T ss_pred EEEECCCCceeeEEEC
Confidence 9999999999988764
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00047 Score=82.23 Aligned_cols=204 Identities=13% Similarity=0.152 Sum_probs=139.7
Q ss_pred EEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCC-eEEEEe-CC-ceeeeccCCC-----eEEEEECCCCCc----
Q psy10114 562 AWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR-VGALAW-NG-DMLSSGSRDR-----MILQRDVRTPNS---- 629 (819)
Q Consensus 562 afSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~-V~sLaw-ng-~~LaSGS~DG-----tI~IWDi~t~~~---- 629 (819)
+|++++..++.|+.+|.|.+.+ ..-+.++.++.+... |..+-. ++ +.|++.+.|+ .+++||++..+.
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 4577888999999999998887 334555778877776 444444 33 5777776664 489999875421
Q ss_pred cce--EEEec-----ccCCeEEEEECCCCCEEEEEECCCeEEEEECC----CCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 630 QSE--RRLVG-----HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH----SMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 630 ~~v--~~l~g-----H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~----t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
+.. ..+.. ...++++++.+.+-+.+|+|-.+|.|..+.-. .+....-......+|+.+++..+++.++.
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 112 12222 34568899999999999999999999988542 12222222345789999999999988333
Q ss_pred EEccCCCCeEEEEECCCCceeEE-E-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-cCCCCE
Q psy10114 699 SGGGTADRCIRFWNTLTGQPMQC-V-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-GHSYRV 772 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~tg~~v~~-l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-gH~~~V 772 (819)
+. .-..|.+|.+....+... + .++....|..+++....++++ .+..+.+|+.+..+.-..+. ||....
T Consensus 189 v~---Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca---~~e~l~fY~sd~~~~cfaf~~g~kk~~ 259 (933)
T KOG2114|consen 189 VA---TTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA---GSEFLYFYDSDGRGPCFAFEVGEKKEM 259 (933)
T ss_pred EE---ecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe---cCceEEEEcCCCcceeeeecCCCeEEE
Confidence 32 367899999985443333 4 456778888888777756653 35789999988777777776 665543
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.7e-05 Score=89.61 Aligned_cols=198 Identities=21% Similarity=0.392 Sum_probs=136.3
Q ss_pred eEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC--CEEEEEECCCeEEEEECCCC---c
Q psy10114 600 VGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN--QYLASGGNDNRLYVWNLHSM---S 672 (819)
Q Consensus 600 V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg--~~LaSGS~DGtI~IWDl~t~---~ 672 (819)
+.++.. .|+-++.+++-|.. +-|+..+-...........-.|-...|++.. .+-++......-.+|++... .
T Consensus 27 ~~a~si~p~grdi~lAsr~gl~-i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~a 105 (1081)
T KOG0309|consen 27 FNAVSINPSGRDIVLASRQGLY-IIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNA 105 (1081)
T ss_pred ccceeeccccchhhhhhhcCeE-EEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCCccc
Confidence 334444 56677777776644 5566654432221111122346777888743 34444445556678887533 2
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEEc-CCCCeEEEEEccC-CCEEEEEEecCCC
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCVD-TGSQVCNLAWSKH-SSELVSTHGYSQN 749 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l~-~~s~V~sLafSpd-g~~LastsGssDg 749 (819)
.-..+.+|..+|+.+.|+|+..-++++++ .|..+..||+++-. ++.... -.+.-..++|+-. +..+++ +..+
T Consensus 106 Ief~lhghsraitd~n~~~q~pdVlatcs--vdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas---shg~ 180 (1081)
T KOG0309|consen 106 IEFVLHGHSRAITDINFNPQHPDVLATCS--VDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS---SHGN 180 (1081)
T ss_pred eEEEEecCccceeccccCCCCCcceeecc--ccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh---ccCC
Confidence 34455689999999999999999999987 99999999999854 444432 3455677888864 444554 3457
Q ss_pred eEEEEECCC-CcEEEEEecCCCCEEEEEEec-CCCEEEEEeCCCcEEEEECCCCce
Q psy10114 750 QILVWKYPT-LTQVAKLTGHSYRVLYLAMSP-DGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 750 ~I~IWDl~s-~k~l~sl~gH~~~VtsLafSp-DG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
.|.+||.+. +.++..+++|...|.+++|.. ....+.+++.||+|++||......
T Consensus 181 ~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~ 236 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT 236 (1081)
T ss_pred ceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence 899999984 567889999999999999865 344678899999999999876543
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.8e-05 Score=79.38 Aligned_cols=148 Identities=16% Similarity=0.307 Sum_probs=94.0
Q ss_pred cCCCCEEEEEecCceEEEeecCCceEE-EEEe-cCCCCeE-EEEeCCceeeeccC-----CCeEEEEECCCCCccceEEE
Q psy10114 564 NERGNLVAVGTHHGYVQVWDVSVAKQV-HKLV-GHTARVG-ALAWNGDMLSSGSR-----DRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 564 SpdG~~LAsGs~DGtI~IWDl~tgk~i-~tl~-gHs~~V~-sLawng~~LaSGS~-----DGtI~IWDi~t~~~~~v~~l 635 (819)
+--++.+++|..||.+.+.+.+.-..+ +.+. .|.+... +..-.++.+.++.- -+..+.|+++..+......
T Consensus 98 s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~- 176 (319)
T KOG4714|consen 98 TMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSK- 176 (319)
T ss_pred cccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccc-
Confidence 345678999999999999998752111 1111 1111111 11113444444332 2445667766533221111
Q ss_pred ecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCc-eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC
Q psy10114 636 VGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHSMS-PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713 (819)
Q Consensus 636 ~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t~~-~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl 713 (819)
.....|.+++-+|. ...+++|+.||.+-+||.++.. +...++.|++++..+.|+|....-+.+++ .||.+-.||.
T Consensus 177 -~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~s--edGslw~wda 253 (319)
T KOG4714|consen 177 -KALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCS--EDGSLWHWDA 253 (319)
T ss_pred -cccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEec--CCCcEEEEcC
Confidence 12234889998884 4567888999999999998874 45567789999999999997655444554 8999999997
Q ss_pred CC
Q psy10114 714 LT 715 (819)
Q Consensus 714 ~t 715 (819)
.+
T Consensus 254 s~ 255 (319)
T KOG4714|consen 254 ST 255 (319)
T ss_pred CC
Confidence 74
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.04 E-value=7e-05 Score=88.72 Aligned_cols=264 Identities=12% Similarity=0.209 Sum_probs=174.4
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc--eEEEeecCC-ceEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG--YVQVWDVSV-AKQV 590 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG--tI~IWDl~t-gk~i 590 (819)
..++.++ .+.++.|+..|.|+++++.+|.... ....|+..|+-+.=+.||..+.+.+.-. ...+|++.+ +...
T Consensus 1104 fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~--s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~ 1181 (1516)
T KOG1832|consen 1104 FTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEE--SVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPR 1181 (1516)
T ss_pred eeeEEeecCCceEEeeeccceEEEEEccCccccc--cccccccccccccccCCcceeeeeccccCchHHHhccccccCcc
Confidence 3444555 4578999999999999999997654 5678999999999999998777765433 478999864 4455
Q ss_pred EEEecCCCCeEEEEeCCc--eeeeccCCCeEEEEECCCCCccceEEEe---cccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 591 HKLVGHTARVGALAWNGD--MLSSGSRDRMILQRDVRTPNSQSERRLV---GHRQEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 591 ~tl~gHs~~V~sLawng~--~LaSGS~DGtI~IWDi~t~~~~~v~~l~---gH~~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
+++.+ -.++.|+.. .-+.|.......+||+.+..... ..+. +..-.-.+..|+|++++++ +|| .+
T Consensus 1182 Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~-tylt~~~~~~y~~n~a~FsP~D~LIl---ndG--vL 1251 (1516)
T KOG1832|consen 1182 HSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQ-TYLTDTVTSSYSNNLAHFSPCDTLIL---NDG--VL 1251 (1516)
T ss_pred ccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHH-HhcCcchhhhhhccccccCCCcceEe---eCc--ee
Confidence 55543 346778432 33445555678899999876321 1121 1222336788999988776 355 57
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
||++..+.++.|...... -.-.|+|+|..++.-.- |||+++-+.++.+..- .-+.+.|+..|+.++++-.
T Consensus 1252 WDvR~~~aIh~FD~ft~~-~~G~FHP~g~eVIINSE--------IwD~RTF~lLh~VP~L-dqc~VtFNstG~VmYa~~~ 1321 (1516)
T KOG1832|consen 1252 WDVRIPEAIHRFDQFTDY-GGGGFHPSGNEVIINSE--------IWDMRTFKLLHSVPSL-DQCAVTFNSTGDVMYAMLN 1321 (1516)
T ss_pred eeeccHHHHhhhhhheec-ccccccCCCceEEeech--------hhhhHHHHHHhcCccc-cceEEEeccCccchhhhhh
Confidence 999998888887654422 23469999998887542 9999998887766432 3467889888888776320
Q ss_pred cCC---------------CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC---------CCcEEEEECCCC
Q psy10114 746 YSQ---------------NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG---------DETLRFWNVFSK 801 (819)
Q Consensus 746 ssD---------------g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~---------DGtIrIWdl~s~ 801 (819)
-.| ...+-+|..+.+.+.++.+. ..+..++-++...+++.--. +-..|++++...
T Consensus 1322 ~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~-R~~~Dlct~~~D~~l~vIe~~~~~d~dq~sT~~r~yEIGR~ 1400 (1516)
T KOG1832|consen 1322 IEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVD-RCLLDLCTEPTDSFLGVIEMEDQEDMDQFSTSARMYEIGRR 1400 (1516)
T ss_pred hhhhhhhhcccccccchhhhhccccccccccceeeecc-cchhhhhcCCccceEEEEeccChhhhhhhhhhhhhhhhccc
Confidence 000 12344455555666666543 45677777887777765433 225677777543
Q ss_pred c
Q psy10114 802 V 802 (819)
Q Consensus 802 ~ 802 (819)
+
T Consensus 1401 r 1401 (1516)
T KOG1832|consen 1401 R 1401 (1516)
T ss_pred C
Confidence 3
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=2e-05 Score=87.69 Aligned_cols=212 Identities=13% Similarity=0.046 Sum_probs=150.7
Q ss_pred cCCCCeEEEEe-CCceeeeccCCCeEEEEECCC-CCccceEEEecccCCeEEEEECCCCCEEEEEEC-CCeEEEEECCCC
Q psy10114 595 GHTARVGALAW-NGDMLSSGSRDRMILQRDVRT-PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-DNRLYVWNLHSM 671 (819)
Q Consensus 595 gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t-~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DGtI~IWDl~t~ 671 (819)
-|...|+.+.. -.+++.+++.||.++.|.-.. .....+..+..|...|.+++.+-++..+.|++. |..++++|+++-
T Consensus 7 mhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 7 MHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred cccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 36677776666 578999999999999998654 333445566778889999999999999999888 999999999876
Q ss_pred ceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEE-E--cCCCCeEEEEEccCCCEEEEEEec
Q psy10114 672 SPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQC-V--DTGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 672 ~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~-l--~~~s~V~sLafSpdg~~LastsGs 746 (819)
..+..++ .-.+.+..+.-..+...+++.+ ...++.+.++|-..+.+... + -+.++|..+.+++.+..+++ ..
T Consensus 87 DminmiKL~~lPg~a~wv~skGd~~s~IAVs-~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vS--iD 163 (558)
T KOG0882|consen 87 DMINMIKLVDLPGFAEWVTSKGDKISLIAVS-LFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVS--ID 163 (558)
T ss_pred chhhhcccccCCCceEEecCCCCeeeeEEee-cccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceee--cc
Confidence 5443322 2233322221111122233333 24789999999876543222 2 46789999999999999998 77
Q ss_pred CCCeEEEEECCC------CcEEEEE---------ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccccc
Q psy10114 747 SQNQILVWKYPT------LTQVAKL---------TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESK 809 (819)
Q Consensus 747 sDg~I~IWDl~s------~k~l~sl---------~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~~ 809 (819)
..|.|.-|..+. .+....+ ........++.|+|+|..+.+-+.|..||++++.+++..+...+
T Consensus 164 ~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 164 ISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred ccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhc
Confidence 789999998762 1111111 12345678999999999999999999999999999987665443
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00078 Score=79.58 Aligned_cols=222 Identities=12% Similarity=0.009 Sum_probs=135.7
Q ss_pred CCCEEEEEec-CceEEEeecCCceEEEEEec-CCCCeEEEEe----CCceeeec------------------cCCCeEEE
Q psy10114 566 RGNLVAVGTH-HGYVQVWDVSVAKQVHKLVG-HTARVGALAW----NGDMLSSG------------------SRDRMILQ 621 (819)
Q Consensus 566 dG~~LAsGs~-DGtI~IWDl~tgk~i~tl~g-Hs~~V~sLaw----ng~~LaSG------------------S~DGtI~I 621 (819)
||++|++-.. ++.|...+++..++-+.+.- ....+..+++ +-.+++.+ -..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 6778877764 56666667666554443321 1122222222 11122222 22345556
Q ss_pred EECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC----CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEE
Q psy10114 622 RDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND----NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 622 WDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LL 697 (819)
.|..+.+.. .++.- .+....+++++||+++++.+.+ +++..-+..+...+..+... . ..++.++|+...
T Consensus 220 ID~etmeV~--~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~--~--iea~vkdGK~~~ 292 (635)
T PRK02888 220 VDAETMEVA--WQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIA--R--IEEAVKAGKFKT 292 (635)
T ss_pred EECccceEE--EEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchH--H--HHHhhhCCCEEE
Confidence 666553321 11111 1234567889999998877632 23333333222222222110 0 013345777666
Q ss_pred EEEccCCCCeEEEEECCC-----CceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE-----------
Q psy10114 698 ASGGGTADRCIRFWNTLT-----GQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ----------- 761 (819)
Q Consensus 698 aSGgGs~DgtIrIWDl~t-----g~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~----------- 761 (819)
+ .++.|.+.|.++ .+.+..+..+.....+.++|||++++++ +..++.+.+.|+.+.+.
T Consensus 293 V-----~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVa-nklS~tVSVIDv~k~k~~~~~~~~~~~~ 366 (635)
T PRK02888 293 I-----GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIAN-GKLSPTVTVIDVRKLDDLFDGKIKPRDA 366 (635)
T ss_pred E-----CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEe-CCCCCcEEEEEChhhhhhhhccCCccce
Confidence 5 367899999998 4677778899999999999999999987 66789999999987663
Q ss_pred -EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 762 -VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 762 -l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+.+..-- ......+|+++|....|---|..|-.||+.+.
T Consensus 367 vvaevevG-lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a 406 (635)
T PRK02888 367 VVAEPELG-LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAA 406 (635)
T ss_pred EEEeeccC-CCcceEEECCCCCEEEeEeecceeEEEehHHH
Confidence 3444332 23467899999998888899999999999873
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0014 Score=74.79 Aligned_cols=240 Identities=16% Similarity=0.205 Sum_probs=136.9
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceE-------------------------------------------EEEE
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ-------------------------------------------VHKL 593 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~-------------------------------------------i~tl 593 (819)
.|++++|+++..-|++|...|.|-||.....+. ..-+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 588999999988999999999999986532211 1112
Q ss_pred ecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEec------ccCCeEEEEECC-----CC---CEEEEEE
Q psy10114 594 VGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVG------HRQEVCGLKWSP-----DN---QYLASGG 658 (819)
Q Consensus 594 ~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g------H~~~VtsLafSp-----dg---~~LaSGS 658 (819)
+...++|++++. |=.+++.|..+|.+.+.|+|.+.......+.. ....|+++.|+- |+ -.+++|+
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT 162 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT 162 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence 334678999988 55699999999999999999876432222222 234578888863 33 3789999
Q ss_pred CCCeEEEEECC--C-Cce----eEEEecCCCCEEEEE-EcCC-C-------------------CeEEEEEccCCCCeEEE
Q psy10114 659 NDNRLYVWNLH--S-MSP----LQTYTEHLAAVKAIA-WSPH-H-------------------HGLLASGGGTADRCIRF 710 (819)
Q Consensus 659 ~DGtI~IWDl~--t-~~~----i~t~~~h~~~VtsLa-fSPd-g-------------------~~LLaSGgGs~DgtIrI 710 (819)
+.|.+.+|.+. . +.- ......+.++|..+. ++.+ | +.+++.. .+..+|+
T Consensus 163 n~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv---Se~~irv 239 (395)
T PF08596_consen 163 NSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV---SESDIRV 239 (395)
T ss_dssp TTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE----SSEEEE
T ss_pred CCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE---cccceEE
Confidence 99999999874 1 111 111124556666555 3221 1 2234433 4789999
Q ss_pred EECCCCceeEEEcCC-CCeEEEEEc-----cCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC----CCEEEEEEecC
Q psy10114 711 WNTLTGQPMQCVDTG-SQVCNLAWS-----KHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS----YRVLYLAMSPD 780 (819)
Q Consensus 711 WDl~tg~~v~~l~~~-s~V~sLafS-----pdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~----~~VtsLafSpD 780 (819)
+...+.+...+.... .....+.+- ..+..|++ -..+|.++++.++..+.+..+.-.. ..+...+++++
T Consensus 240 ~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~--l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~ 317 (395)
T PF08596_consen 240 FKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVC--LFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRN 317 (395)
T ss_dssp E-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEE--EETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TT
T ss_pred EeCCCCcccceeeccccccceEEEEeecccCCceEEEE--EECCCcEEEEECCCchHhhcccCCCccccccccccEECCC
Confidence 999888776655422 122334442 24445555 4589999999999999998887532 23455778999
Q ss_pred CCEEEEEeCCCcEEEEECCCCc
Q psy10114 781 GEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s~~ 802 (819)
|+.++-.+. ..+.++.+....
T Consensus 318 Gdi~~~~gp-sE~~l~sv~~~~ 338 (395)
T PF08596_consen 318 GDIFYWTGP-SEIQLFSVWGEG 338 (395)
T ss_dssp S-EEEE-SS-SEEEEEEEES--
T ss_pred CCEEEEeCc-ccEEEEEEEccC
Confidence 997776654 355555554443
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0084 Score=64.23 Aligned_cols=198 Identities=13% Similarity=0.195 Sum_probs=116.7
Q ss_pred eccCCCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecC-CCCeEEEEe--CCceeeeccCCCeEEEEECC
Q psy10114 550 DLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGH-TARVGALAW--NGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gH-s~~V~sLaw--ng~~LaSGS~DGtI~IWDi~ 625 (819)
.+.+-.+.+..++|+|+.+ ++++....+.|...+. +|+.++.+.-. .+..-.+++ ++.++++.-+++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4555566799999999754 6667777888888886 57888887633 356778888 34455555568999999884
Q ss_pred CCCcc----ceEEE-----ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC---CceeEEE--------ecCCCCEE
Q psy10114 626 TPNSQ----SERRL-----VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS---MSPLQTY--------TEHLAAVK 685 (819)
Q Consensus 626 t~~~~----~v~~l-----~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t---~~~i~t~--------~~h~~~Vt 685 (819)
..... ....+ ..++..+-+++|++.++.|+.+-+..-..++.+.. ...+... ......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 43211 11111 12456689999999988888887776666666543 2221111 11345678
Q ss_pred EEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC----------CCeEEEEEccCCCEEEEEEecCCCeEEEE
Q psy10114 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG----------SQVCNLAWSKHSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 686 sLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~----------s~V~sLafSpdg~~LastsGssDg~I~IW 754 (819)
+++++|....+++.+. .++.+..+| .+|+.+..+.-. .+.-.++|.++|+..++ + +-+...+|
T Consensus 175 ~l~~~p~t~~lliLS~--es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv--s-EpNlfy~f 247 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSD--ESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV--S-EPNLFYRF 247 (248)
T ss_dssp EEEEETTTTEEEEEET--TTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE--E-TTTEEEEE
T ss_pred ceEEcCCCCeEEEEEC--CCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE--c-CCceEEEe
Confidence 9999999888888775 889999999 678877665322 36889999999976665 3 45555443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00031 Score=83.22 Aligned_cols=181 Identities=18% Similarity=0.319 Sum_probs=129.2
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEE
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR 634 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~ 634 (819)
.+.++|++++ ++.++.|+.+|.|++.+.+.. . .+...|+.. .-.|.++++||.||+|.+-.+.+.+....
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~~-- 108 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEITQ-- 108 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc----ccCCceEEEecCCCcEEEeeccCCcccee--
Confidence 4567788877 779999999999999997533 2 444455554 44689999999999999998887664322
Q ss_pred EecccCCeEEEEECCC-----CCEEEEEECCCeEEEEECCCC--ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 635 LVGHRQEVCGLKWSPD-----NQYLASGGNDNRLYVWNLHSM--SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 635 l~gH~~~VtsLafSpd-----g~~LaSGS~DGtI~IWDl~t~--~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
..-...+.+++++|+ .+++++||.-| +.++.-+-. +.........++|.++.|..+ +++-+ .|--
T Consensus 109 -~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g~---lIAWa---nd~G 180 (846)
T KOG2066|consen 109 -YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRGN---LIAWA---NDDG 180 (846)
T ss_pred -EecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEecCc---EEEEe---cCCC
Confidence 223467899999997 56899999988 777664311 111145567899999999744 45544 5777
Q ss_pred EEEEECCCCceeEEEcCCC-------CeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 708 IRFWNTLTGQPMQCVDTGS-------QVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~~s-------~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
|++||+.+++.+..+.... -...+.|.++.+.++ |- ..+|++..++
T Consensus 181 v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI---GW-~d~v~i~~I~ 233 (846)
T KOG2066|consen 181 VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI---GW-GDSVKICSIK 233 (846)
T ss_pred cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE---ec-CCeEEEEEEe
Confidence 9999999998887774332 246688877665444 43 3567887776
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0019 Score=72.33 Aligned_cols=250 Identities=15% Similarity=0.204 Sum_probs=142.5
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC-------------
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA------------- 598 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~------------- 598 (819)
.+...++|+.+++...+... ...+....|||+|+.+|... ++.|.+.+..+++..+....-..
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~---~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeE 97 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP---PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEE 97 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E---ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHH
T ss_pred ceeEEEEecCCCceEECcCC---ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccc
Confidence 46789999999887664332 56788999999999999886 46899999877754432211111
Q ss_pred ----CeEEEEe--CCceeeec----------------------------------cCCC--eEEEEECCCCCccceEEE-
Q psy10114 599 ----RVGALAW--NGDMLSSG----------------------------------SRDR--MILQRDVRTPNSQSERRL- 635 (819)
Q Consensus 599 ----~V~sLaw--ng~~LaSG----------------------------------S~DG--tI~IWDi~t~~~~~v~~l- 635 (819)
.-.++-| +++.|+.. ..+- .+.++|+.+++...+...
T Consensus 98 Ev~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~ 177 (353)
T PF00930_consen 98 EVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPN 177 (353)
T ss_dssp HTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---H
T ss_pred cccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeecc
Confidence 1123444 23333322 2222 234566665543211111
Q ss_pred --ecccCCeEEEEECCCCCEEEEE--ECCC---eEEEEECCCCceeEEEec-CCCC---EEEEEEc-CCCCeEEEEEccC
Q psy10114 636 --VGHRQEVCGLKWSPDNQYLASG--GNDN---RLYVWNLHSMSPLQTYTE-HLAA---VKAIAWS-PHHHGLLASGGGT 703 (819)
Q Consensus 636 --~gH~~~VtsLafSpdg~~LaSG--S~DG---tI~IWDl~t~~~i~t~~~-h~~~---VtsLafS-Pdg~~LLaSGgGs 703 (819)
.....-+..+.|.++++.++.. ..+. .+.+.|..+++....... ..+. -....+. +++..++....
T Consensus 178 ~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~-- 255 (353)
T PF00930_consen 178 SLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISE-- 255 (353)
T ss_dssp HHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEE--
T ss_pred ccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEE--
Confidence 1234457889999998844433 2222 477788877765433332 2222 2245554 77777776665
Q ss_pred CCC--eEEEEECCCCceeEEEcCCCCeEE-EEEccCCCEEEEEEec---CCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 704 ADR--CIRFWNTLTGQPMQCVDTGSQVCN-LAWSKHSSELVSTHGY---SQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 704 ~Dg--tIrIWDl~tg~~v~~l~~~s~V~s-LafSpdg~~LastsGs---sDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
.|| .|.+++..++.........-.|.. +.++++++.++.++.. ....+...++.++..+..+....+.-..++|
T Consensus 256 ~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~ 335 (353)
T PF00930_consen 256 RDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASF 335 (353)
T ss_dssp TTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE
T ss_pred cCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEE
Confidence 454 566667766664422233445644 7888998888776432 1335666666634555666654444468999
Q ss_pred ecCCCEEEEE
Q psy10114 778 SPDGEAIVTG 787 (819)
Q Consensus 778 SpDG~~LaSG 787 (819)
||+|++++-.
T Consensus 336 Spdg~y~v~~ 345 (353)
T PF00930_consen 336 SPDGKYYVDT 345 (353)
T ss_dssp -TTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 9999988753
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0038 Score=72.16 Aligned_cols=221 Identities=10% Similarity=0.081 Sum_probs=123.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEE-ECCCCCccc
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQR-DVRTPNSQS 631 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IW-Di~t~~~~~ 631 (819)
.......++++|+|+.+++ +.||...|+.....+....- .....+| ..+.+|+-..+++|.++ +.....
T Consensus 31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~G-----~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~--- 101 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAFG-----SGLSFVWSSRNRYAVLESSSTIKIYKNFKNEV--- 101 (443)
T ss_dssp -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEEE-----E-SEEEE-TSSEEEEE-TTS-EEEEETTEE-T---
T ss_pred CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccccC-----ceeEEEEecCccEEEEECCCeEEEEEcCcccc---
Confidence 3455789999999999999 55788888885544443322 2235677 44567777778889986 443222
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
...+.. ...+..+-. |..|+..+.+ .|.+||.++++.+.++... +|+.+.|+++|..++..+ +..+.+.
T Consensus 102 ~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t----~~~i~il 170 (443)
T PF04053_consen 102 VKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVT----KDSIYIL 170 (443)
T ss_dssp T------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-----S-SEEEE
T ss_pred ceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEe----CCeEEEE
Confidence 112211 112333332 7777777665 8999999999999998743 489999999999777764 5677777
Q ss_pred ECCCC-----------ceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec
Q psy10114 712 NTLTG-----------QPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 712 Dl~tg-----------~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp 779 (819)
+.... .....+.. ...|.+.+|..+ -++++ ..+.++. +..|+ ...+..-+.++.=+...+
T Consensus 171 ~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYt----T~~~lkY--l~~Ge-~~~i~~ld~~~yllgy~~ 242 (443)
T PF04053_consen 171 KYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYT----TSNHLKY--LVNGE-TGIIAHLDKPLYLLGYLP 242 (443)
T ss_dssp EE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE-----TTEEEE--EETTE-EEEEEE-SS--EEEEEET
T ss_pred EecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEE----cCCeEEE--EEcCC-cceEEEcCCceEEEEEEc
Confidence 65433 12333333 678899999776 33333 2236666 33332 333333355667778888
Q ss_pred CCCEEEEEeCCCcEEEEECCCCc
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+.+.+.....|+.|..+.+....
T Consensus 243 ~~~~ly~~Dr~~~v~~~~ld~~~ 265 (443)
T PF04053_consen 243 KENRLYLIDRDGNVISYELDLSE 265 (443)
T ss_dssp TTTEEEEE-TT--EEEEE--HHH
T ss_pred cCCEEEEEECCCCEEEEEECHHH
Confidence 77889889999999999887544
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0011 Score=79.10 Aligned_cols=202 Identities=11% Similarity=0.185 Sum_probs=135.7
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCC-eEEEEEcCCCCEEEEEecCc-----eEEEeecCCc-
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNS-VTSVAWNERGNLVAVGTHHG-----YVQVWDVSVA- 587 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~-VtsLafSpdG~~LAsGs~DG-----tI~IWDl~tg- 587 (819)
.+.+++-++..++.|+.+|.|.+.+-. ...+..+..+... |..+....+..+|++.+.|+ .++|||++.-
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~s---~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNSS---FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEeccc---ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 466777778889999999999888743 2233456666666 55554444446777776654 5899998643
Q ss_pred -----eEEE--EEec-----CCCCeEEEEeC--CceeeeccCCCeEEEEECCC--CCccceEEEecccCCeEEEEECCCC
Q psy10114 588 -----KQVH--KLVG-----HTARVGALAWN--GDMLSSGSRDRMILQRDVRT--PNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 588 -----k~i~--tl~g-----Hs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t--~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
.++. .+.+ ...++.+++.+ -..+|.|-.+|.|..+.-+- ..............+|+++++..++
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~ 183 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDG 183 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCC
Confidence 2331 2222 24567777774 45789999999999885332 1212222233346789999999998
Q ss_pred CEEEEEECCCeEEEEECCCCce-eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 652 QYLASGGNDNRLYVWNLHSMSP-LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~~-i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
+.++.+..-..|.+|.+....+ ...+..|...+.|..+++....+++++ +..+.+||.....+...+.
T Consensus 184 ~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~----~e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 184 KSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG----SEFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred ceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec----CceEEEEcCCCcceeeeec
Confidence 8744444456899999985443 444778889999999998776566664 5789999987655555554
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0026 Score=75.24 Aligned_cols=214 Identities=10% Similarity=0.041 Sum_probs=123.8
Q ss_pred EcCCCCEEEEE-ecCceEEEeecCCceEEEEEecC-CCCeEEEEeCCceeeeccCC----CeEEEEECCCCCccceEEEe
Q psy10114 563 WNERGNLVAVG-THHGYVQVWDVSVAKQVHKLVGH-TARVGALAWNGDMLSSGSRD----RMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 563 fSpdG~~LAsG-s~DGtI~IWDl~tgk~i~tl~gH-s~~V~sLawng~~LaSGS~D----GtI~IWDi~t~~~~~v~~l~ 636 (819)
+++||+.+... -..+.+.+.|.++.+...++.-. ...-..+..+|.++++.+.+ +++..-+..... ....+.
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d--~~vvfn 277 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD--WVVVFN 277 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCc--eEEEEc
Confidence 34556544322 23456777777776666555421 12222333356666555421 222222221111 111111
Q ss_pred cccCCeEEEEECCCCCEEEEEECCCeEEEEECCC----C-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 637 GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS----M-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 637 gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t----~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
-. .+ -++.++|++... .+++|.+.|.++ + +.+..+. -......++++|||+++++++. .+.++.+.
T Consensus 278 i~--~i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVank--lS~tVSVI 348 (635)
T PRK02888 278 IA--RI--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGK--LSPTVTVI 348 (635)
T ss_pred hH--HH--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCC--CCCcEEEE
Confidence 00 00 023457776665 367899999988 3 4444443 4455678999999999999876 89999999
Q ss_pred ECCCCce------------eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC----------CcEEEEEecCC
Q psy10114 712 NTLTGQP------------MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT----------LTQVAKLTGHS 769 (819)
Q Consensus 712 Dl~tg~~------------v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s----------~k~l~sl~gH~ 769 (819)
|+.+.+. +.....+......+|.++|+...+ -.-|++|..|++.+ ...+..+.-|-
T Consensus 349 Dv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~ayts--lf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y 426 (635)
T PRK02888 349 DVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTT--LFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHY 426 (635)
T ss_pred EChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEe--EeecceeEEEehHHHHHHhccccCCcceecccCCC
Confidence 9988553 445555666778899999874444 67899999999875 23334444332
Q ss_pred CC-----EEEEEEecCCCEEEEEeC
Q psy10114 770 YR-----VLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 770 ~~-----VtsLafSpDG~~LaSGS~ 789 (819)
.+ ..+=.-.+||++|++...
T Consensus 427 ~pgh~~~~~g~t~~~dgk~l~~~nk 451 (635)
T PRK02888 427 QPGHNHASMGETKEADGKWLVSLNK 451 (635)
T ss_pred ccceeeecCCCcCCCCCCEEEEccc
Confidence 22 111223678888887643
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.01 Score=65.83 Aligned_cols=261 Identities=16% Similarity=0.145 Sum_probs=147.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecCCceEEEEEecCCC-CeE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVSVAKQVHKLVGHTA-RVG 601 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~tgk~i~tl~gHs~-~V~ 601 (819)
+.+++.|..+++..-... .+-.-.+..+|+|+.+++++ ..-.|.+||.++-+....+.-... +..
T Consensus 17 ~rv~viD~d~~k~lGmi~----~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~ 92 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMID----TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ 92 (342)
T ss_dssp EEEEEEETTTTEEEEEEE----EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--
T ss_pred ceEEEEECCCCcEEEEee----cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe
Confidence 479999999988755433 23345577899999988753 345699999999988776653332 222
Q ss_pred EEEeCCceeeeccCCCe-----------EEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC-
Q psy10114 602 ALAWNGDMLSSGSRDRM-----------ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH- 669 (819)
Q Consensus 602 sLawng~~LaSGS~DGt-----------I~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~- 669 (819)
++. ..+.+.....++. |.+-|+...+. +..+. -+=|.+.+-...+-+.+-+.||++.-..+.
T Consensus 93 ~~~-~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kv--v~ei~---~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~ 166 (342)
T PF06433_consen 93 VVP-YKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKV--VGEID---TPGCWLIYPSGNRGFSMLCGDGSLLTVTLDA 166 (342)
T ss_dssp BS---GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEE--EEEEE---GTSEEEEEEEETTEEEEEETTSCEEEEEETS
T ss_pred ecc-cccceEEccCCcEEEEEccCCCCeEEEEECCCCce--eeeec---CCCEEEEEecCCCceEEEecCCceEEEEECC
Confidence 221 1222223333444 44445444321 11111 111223332223568888999999988887
Q ss_pred CCceeEEEe----cCCCC-EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE--EEcC-----------CCCeEEE
Q psy10114 670 SMSPLQTYT----EHLAA-VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ--CVDT-----------GSQVCNL 731 (819)
Q Consensus 670 t~~~i~t~~----~h~~~-VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~--~l~~-----------~s~V~sL 731 (819)
.|+..++-. ....+ +..-++...+..++.. +.+|.|+--|+....... .... .+.-.-+
T Consensus 167 ~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~---Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~ 243 (342)
T PF06433_consen 167 DGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFV---SYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLI 243 (342)
T ss_dssp TSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEE---BTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-E
T ss_pred CCCEeEeeccccCCCCcccccccceECCCCeEEEE---ecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeee
Confidence 555543321 11111 2233344444334333 278999988887664321 1110 1223446
Q ss_pred EEccCCCEEEEEE-ecCCC-------eEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEEE-eCCCcEEEEECCCC
Q psy10114 732 AWSKHSSELVSTH-GYSQN-------QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVTG-AGDETLRFWNVFSK 801 (819)
Q Consensus 732 afSpdg~~Lasts-GssDg-------~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaSG-S~DGtIrIWdl~s~ 801 (819)
++++..+.+++.. .+.++ .|.++|..+++.+..+.. ...+.+++.+.|.+ +|++. ..++.+.+||..++
T Consensus 244 A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG 322 (342)
T PF06433_consen 244 AYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG 322 (342)
T ss_dssp EEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred eeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence 7777666665542 22222 588899999999998873 23577999999876 55544 45899999999999
Q ss_pred ceeccc
Q psy10114 802 VRSQRE 807 (819)
Q Consensus 802 ~~~~k~ 807 (819)
+...+.
T Consensus 323 k~~~~~ 328 (342)
T PF06433_consen 323 KLVRSI 328 (342)
T ss_dssp -EEEEE
T ss_pred cEEeeh
Confidence 776554
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0031 Score=77.89 Aligned_cols=201 Identities=13% Similarity=0.155 Sum_probs=134.3
Q ss_pred CCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC----CC
Q psy10114 597 TARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL----HS 670 (819)
Q Consensus 597 s~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl----~t 670 (819)
...|.++.| +++.++.+..+|.|.+-|..+.... ....-...|.+++||||++.++..+.++++.+-+- -.
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e---ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE---IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee---eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence 367889999 6788888999999999988775533 23334578999999999999999998888766432 11
Q ss_pred -------------------CceeEEEecCC---------------------CCEEEEEEcCCCCeEEEEEc--cCCCCeE
Q psy10114 671 -------------------MSPLQTYTEHL---------------------AAVKAIAWSPHHHGLLASGG--GTADRCI 708 (819)
Q Consensus 671 -------------------~~~i~t~~~h~---------------------~~VtsLafSPdg~~LLaSGg--Gs~DgtI 708 (819)
|+....|.+.. ..=++|.|-.||+++++++- .+..+.|
T Consensus 145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rki 224 (1265)
T KOG1920|consen 145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKI 224 (1265)
T ss_pred ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeE
Confidence 11111222111 11235899999997776542 1222899
Q ss_pred EEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEec-CCCeEEEEECCCCcEEEE----EecCCCCEEEEEEecCCC
Q psy10114 709 RFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGY-SQNQILVWKYPTLTQVAK----LTGHSYRVLYLAMSPDGE 782 (819)
Q Consensus 709 rIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k~l~s----l~gH~~~VtsLafSpDG~ 782 (819)
++||-. |..-..- .....-.+++|-|.|..++++... +|+.|.+|.-+ |-.-.+ +......|..++|+.++.
T Consensus 225 rV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 225 RVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLDEKEVEELAWNSNSD 302 (1265)
T ss_pred EEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcccccchheeeecCCCC
Confidence 999977 4432222 223445789999999999987533 45568888853 322222 222334489999999999
Q ss_pred EEEE---EeCCCcEEEEECCCCc
Q psy10114 783 AIVT---GAGDETLRFWNVFSKV 802 (819)
Q Consensus 783 ~LaS---GS~DGtIrIWdl~s~~ 802 (819)
.|++ ......|++|-+.+-.
T Consensus 303 iLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 303 ILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred ceeeeecccccceEEEEEecCeE
Confidence 9987 4445559999987644
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=97.82 E-value=5.4e-05 Score=56.53 Aligned_cols=37 Identities=38% Similarity=0.871 Sum_probs=35.0
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
.+..+.+|.+.|.+++|+|+++++++|+.|++|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4578899999999999999999999999999999998
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.027 Score=66.74 Aligned_cols=280 Identities=15% Similarity=0.091 Sum_probs=164.1
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCC--Ce-------EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGN--SV-------TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~--~V-------tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
++.++.++.++.|+-.|..+|+..=..+...... .+ ..++. .+..+++++.||.+.-.|.++|+.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 5667777778888888998887654333322111 10 01122 2457788889999999999999998776
Q ss_pred ec--CCC--CeE-EEEeCCceeeecc------CCCeEEEEECCCCCccceEEEecc------------------------
Q psy10114 594 VG--HTA--RVG-ALAWNGDMLSSGS------RDRMILQRDVRTPNSQSERRLVGH------------------------ 638 (819)
Q Consensus 594 ~g--Hs~--~V~-sLawng~~LaSGS------~DGtI~IWDi~t~~~~~v~~l~gH------------------------ 638 (819)
.. +.. .+. +-...++.+++++ .+|.|..+|.++++..-.......
T Consensus 147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~ 226 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGD 226 (527)
T ss_pred ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCC
Confidence 52 111 121 1112234455543 268899999988764221111100
Q ss_pred -----cCCe-EEEEECCCCCEEEEEEC------------CC----eEEEEECCCCceeEEEecCCCC---------EEEE
Q psy10114 639 -----RQEV-CGLKWSPDNQYLASGGN------------DN----RLYVWNLHSMSPLQTYTEHLAA---------VKAI 687 (819)
Q Consensus 639 -----~~~V-tsLafSpdg~~LaSGS~------------DG----tI~IWDl~t~~~i~t~~~h~~~---------VtsL 687 (819)
...+ ..+++.++..++..+.. |+ +|.-.|+++|+....++..... ..-+
T Consensus 227 ~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~ 306 (527)
T TIGR03075 227 AWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILF 306 (527)
T ss_pred ccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEE
Confidence 0111 13466666666666542 12 6778899999988877642221 1222
Q ss_pred EEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEE------------c--CCCCe-----------------------
Q psy10114 688 AWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCV------------D--TGSQV----------------------- 728 (819)
Q Consensus 688 afSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l------------~--~~s~V----------------------- 728 (819)
....+|+ .+++.+. .+|.+.+.|-++|+.+... . .+.++
T Consensus 307 d~~~~G~~~~~v~~~~--K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~ 384 (527)
T TIGR03075 307 DLKKDGKPRKLLAHAD--RNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFL 384 (527)
T ss_pred EeccCCcEEEEEEEeC--CCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCc
Confidence 2334555 4555554 8999999999999886221 0 00000
Q ss_pred -----EEEEEccCCCEEEEEEec-------------------------------CCCeEEEEECCCCcEEEEEecCCCCE
Q psy10114 729 -----CNLAWSKHSSELVSTHGY-------------------------------SQNQILVWKYPTLTQVAKLTGHSYRV 772 (819)
Q Consensus 729 -----~sLafSpdg~~LastsGs-------------------------------sDg~I~IWDl~s~k~l~sl~gH~~~V 772 (819)
..++++|+...+++..+. ..+.+.-+|+.+++...+........
T Consensus 385 Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~ 464 (527)
T TIGR03075 385 GGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLW 464 (527)
T ss_pred CCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCC
Confidence 125666666555543211 12568888888888887765332222
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 773 LYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 773 tsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
.+. +.-.|..++.++.||.++.+|..+++..-+.
T Consensus 465 ~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~ 498 (527)
T TIGR03075 465 GGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKF 498 (527)
T ss_pred Ccc-eEECCcEEEEECCCCeEEEEECCCCCEeEEE
Confidence 222 2225557778888999999999999887654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.014 Score=61.91 Aligned_cols=259 Identities=13% Similarity=0.115 Sum_probs=141.0
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCC-CCe-
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT-ARV- 600 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs-~~V- 600 (819)
...++.++..+.+.--|..+|+..-...+. ..+.+-+.- -|++++.|..+|.+.+.+.++|.+...+..-. -.+
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg---~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~ 98 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILG---VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR 98 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhC---ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence 456788888899999999998865433332 344443332 47889999999999999999998877765321 122
Q ss_pred EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC
Q psy10114 601 GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 601 ~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h 680 (819)
..+++++..+..|+.|++.+..|.++.... .+.+-..+...+-+..+-...|..+...|.|.--..+.... .++-.+
T Consensus 99 a~~d~~~glIycgshd~~~yalD~~~~~cV--ykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~-~~~w~~ 175 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCV--YKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSS-TEFWAA 175 (354)
T ss_pred eEEcCCCceEEEecCCCcEEEecccccceE--EecccCCceeccceecCCCceEEEEeccceEEEEccCCCCc-ceehhh
Confidence 246678999999999999999999886643 33332222223334455233444445555555444443311 111111
Q ss_pred --CCCEEE--EEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEE-EEEc-cCCCEEEEEEecCCC-----
Q psy10114 681 --LAAVKA--IAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN-LAWS-KHSSELVSTHGYSQN----- 749 (819)
Q Consensus 681 --~~~Vts--LafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~s-LafS-pdg~~LastsGssDg----- 749 (819)
.+++.+ ++.. ..+..+ +.||.+.-+| ..|+.+....++++|.. -+-+ |..+.+.. +..+.
T Consensus 176 ~~~~PiF~splcv~---~sv~i~---~VdG~l~~f~-~sG~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~--~~~~Cf~~~~ 246 (354)
T KOG4649|consen 176 TRFGPIFASPLCVG---SSVIIT---TVDGVLTSFD-ESGRQVWRPATKGPIFMEPCESRPSCQQISL--ENENCFCAPL 246 (354)
T ss_pred hcCCccccCceecc---ceEEEE---EeccEEEEEc-CCCcEEEeecCCCceecccccCCCcceEEEE--ecCCeEEEec
Confidence 122211 1111 112222 2577777777 56666666655555422 1111 22233333 22222
Q ss_pred ---eEEEEECCCCcEEEEEecCCCCEEEEEEec----CCCEEEEEeCCCcEEEEECCC
Q psy10114 750 ---QILVWKYPTLTQVAKLTGHSYRVLYLAMSP----DGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 750 ---~I~IWDl~s~k~l~sl~gH~~~VtsLafSp----DG~~LaSGS~DGtIrIWdl~s 800 (819)
.-.+|..++|......-. +-...+++. ..+++..++.||.+.+-....
T Consensus 247 p~~ghL~w~~~~g~t~~vy~~---p~l~F~~h~~~~S~~~ll~~~s~dgkv~il~~~~ 301 (354)
T KOG4649|consen 247 PIAGHLLWATQSGTTLHVYLS---PKLRFDLHSPGISYPKLLRRSSGDGKVMILMTSK 301 (354)
T ss_pred cccceEEEEecCCcEEEEEeC---cccceeccCCCCcchhhhhhhcCCCcEEEEEecc
Confidence 223455555433222211 101122211 134677788999998885543
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0021 Score=75.62 Aligned_cols=276 Identities=18% Similarity=0.210 Sum_probs=159.2
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE---
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ--- 589 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~--- 589 (819)
..++.+++-+++.++.|+..|.|++++-.+++... ....+..+.+..+..+++..++|.|+..|.|.++-+..+..
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~-~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~ 113 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRK-LKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL 113 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhhhc-ccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence 35678888889999999999999999988876543 33444456677788899999999999999999998876422
Q ss_pred --EEEE-ecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc--cceEEEecccCCeEEEEECCCCCEEEEEECCCe
Q psy10114 590 --VHKL-VGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS--QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNR 662 (819)
Q Consensus 590 --i~tl-~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~--~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGt 662 (819)
+... +.|..+|++++| |+..+.+|...|.|..-.++.... ...+.+......|..+... ++..|++... .
T Consensus 114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~~LLVStl~--r 190 (726)
T KOG3621|consen 114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QSYLLVSTLT--R 190 (726)
T ss_pred eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cceehHhhhh--h
Confidence 1122 247889999999 577999999999999888876210 1123333445667667654 3334443332 2
Q ss_pred EEEEECCCCceeEEEec-CCC-CEEEEEEcCC----CCeEEEEEccCCCCeEEEEECCC-CceeEEEcC-----------
Q psy10114 663 LYVWNLHSMSPLQTYTE-HLA-AVKAIAWSPH----HHGLLASGGGTADRCIRFWNTLT-GQPMQCVDT----------- 724 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~-h~~-~VtsLafSPd----g~~LLaSGgGs~DgtIrIWDl~t-g~~v~~l~~----------- 724 (819)
..+++.+.++..+.=+. .++ .-...+|-|. ++-.++++ ---.|+|..+- |+.+++...
T Consensus 191 ~~Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~Iyca----RPG~RlWead~~G~V~~Thqfk~ala~~p~p~ 266 (726)
T KOG3621|consen 191 CILCQTEAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCA----RPGLRLWEADFAGEVIKTHQFKDALARPPAPE 266 (726)
T ss_pred hheeecchhHHHHhcCCCcCCccccceEEeeccccCCCceEEEe----cCCCceEEeecceeEEEeeehhhhhccCCCCc
Confidence 33445543321111000 111 0123344443 23334332 34467786653 333332210
Q ss_pred ---CC-----------C-----eEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEE
Q psy10114 725 ---GS-----------Q-----VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV 785 (819)
Q Consensus 725 ---~s-----------~-----V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~La 785 (819)
.+ + ...+.+- ++..+++. .+-.|+|+|..+.+.+.-.. ....|..++- +|+-|.
T Consensus 267 i~~~s~esp~~~~~~~~~q~ls~~k~~~l-~~~~vLa~---te~Giyv~d~~~~~v~l~se-~~~DI~dVs~--~~neiF 339 (726)
T KOG3621|consen 267 IPIRSLESPNQRSLPSGTQHLSLSKSSTL-HSDRVLAW---TEVGIYVFDSNNSQVYLWSE-GGHDILDVSH--CGNEIF 339 (726)
T ss_pred ccCCCcCCccccCCCCCccccccceeEEe-ecceEEEe---ecceEEEEEeccceEEEeec-CCCceeEEee--cCceEE
Confidence 00 0 0111111 11222221 23347788876655544332 2334555554 566666
Q ss_pred EEeCCCcEEEEECCCCce
Q psy10114 786 TGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 786 SGS~DGtIrIWdl~s~~~ 803 (819)
.--.||.+++..+.+.++
T Consensus 340 vL~~d~~l~~~sv~s~qr 357 (726)
T KOG3621|consen 340 VLNLDRGLKVESVASRQR 357 (726)
T ss_pred EEecCCceeEEEeehhHH
Confidence 667788888888776553
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.041 Score=62.49 Aligned_cols=261 Identities=18% Similarity=0.151 Sum_probs=168.8
Q ss_pred EEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceEEEEEecCCCCeEEEEe--CCc-ee
Q psy10114 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGD-ML 610 (819)
Q Consensus 535 V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~-~L 610 (819)
+.+++..+........+. .....+...++|..+.+... ...+...+................-..++. .+. ..
T Consensus 13 ~~v~~~~~~~~~~~~~~~---~~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vy 89 (381)
T COG3391 13 VSVINTGTNKVTAAISLG---RGPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVY 89 (381)
T ss_pred eEEEeecccEEEEEeecC---CCCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEE
Confidence 556665555544333322 25567788888865555442 224555555522222211111122224444 344 55
Q ss_pred eeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC---CCeEEEEECCCCceeEEEecCCCCEEEE
Q psy10114 611 SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN---DNRLYVWNLHSMSPLQTYTEHLAAVKAI 687 (819)
Q Consensus 611 aSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~---DGtI~IWDl~t~~~i~t~~~h~~~VtsL 687 (819)
+....++.|.+.|..+.... .. ..-......++++++++.+..+.. ++++.+.|..+++.+........+ ..+
T Consensus 90 v~~~~~~~v~vid~~~~~~~--~~-~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~ 165 (381)
T COG3391 90 VTTGDSNTVSVIDTATNTVL--GS-IPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGV 165 (381)
T ss_pred EecCCCCeEEEEcCccccee--eE-eeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceE
Confidence 66666789999996664421 11 112226678999999987766654 689999999999888875544445 899
Q ss_pred EEcCCCCeEEEEEccCCCCeEEEEECCCCceeE-----EEcCCCCeEEEEEccCCCEEEEEEecC-CCeEEEEECCCCcE
Q psy10114 688 AWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ-----CVDTGSQVCNLAWSKHSSELVSTHGYS-QNQILVWKYPTLTQ 761 (819)
Q Consensus 688 afSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~-----~l~~~s~V~sLafSpdg~~LastsGss-Dg~I~IWDl~s~k~ 761 (819)
+++|+|..++++-. .++.|.+.|..+..... ....+.....+.++++|+.+++....+ ++.+...|..++..
T Consensus 166 a~~p~g~~vyv~~~--~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v 243 (381)
T COG3391 166 AVDPDGNKVYVTNS--DDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNV 243 (381)
T ss_pred EECCCCCeEEEEec--CCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceE
Confidence 99999998888764 78999999977766553 234455678899999999887754322 36899999888777
Q ss_pred EEE-EecCCCCEEEEEEecCCCEEEEEeCC-CcEEEEECCCCcee
Q psy10114 762 VAK-LTGHSYRVLYLAMSPDGEAIVTGAGD-ETLRFWNVFSKVRS 804 (819)
Q Consensus 762 l~s-l~gH~~~VtsLafSpDG~~LaSGS~D-GtIrIWdl~s~~~~ 804 (819)
... ..........+..+|+|+.+.+.... +.+.+-|..+....
T Consensus 244 ~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~ 288 (381)
T COG3391 244 TATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVV 288 (381)
T ss_pred EEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCcee
Confidence 665 22111156678999999998887444 78888887765543
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00039 Score=82.41 Aligned_cols=182 Identities=15% Similarity=0.287 Sum_probs=129.8
Q ss_pred CCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE
Q psy10114 597 TARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 597 s~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t 676 (819)
...+.|.++++..++-|+.+|.|++.+..... .+...|+.. ..+|.++++|+.||+|.|-.+-+.+...+
T Consensus 39 ~D~is~~av~~~~~~~GtH~g~v~~~~~~~~~----~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~ 108 (846)
T KOG2066|consen 39 NDAISCCAVHDKFFALGTHRGAVYLTTCQGNP----KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQ 108 (846)
T ss_pred hhHHHHHHhhcceeeeccccceEEEEecCCcc----ccccccccc------ccCCceEEEecCCCcEEEeeccCCcccee
Confidence 34567788889999999999999999986532 233334433 56899999999999999999988877766
Q ss_pred EecCCCCEEEEEEcCC----CCeEEEEEccCCCCeEEEEECC---CCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 677 YTEHLAAVKAIAWSPH----HHGLLASGGGTADRCIRFWNTL---TGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 677 ~~~h~~~VtsLafSPd----g~~LLaSGgGs~DgtIrIWDl~---tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
+. -..++.+++++|+ ...-+++|| ..| +.++.-+ ....+..-...+.|.++.| .|+.++-+ +|-
T Consensus 109 ~d-f~rpiksial~Pd~~~~~sk~fv~GG--~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWa---nd~ 179 (846)
T KOG2066|consen 109 YD-FKRPIKSIALHPDFSRQQSKQFVSGG--MAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWA---NDD 179 (846)
T ss_pred Ee-cCCcceeEEeccchhhhhhhheeecC--cce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEEEEe---cCC
Confidence 65 4578999999998 333466665 555 6666432 1222222345688999999 56677762 466
Q ss_pred eEEEEECCCCcEEEEEecCCCCE------EEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 750 QILVWKYPTLTQVAKLTGHSYRV------LYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~gH~~~V------tsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
.|++||..+.+.+..+......+ ..+.|.++. .|+.|=+| +|++..+.
T Consensus 180 Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d-~v~i~~I~ 233 (846)
T KOG2066|consen 180 GVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGD-SVKICSIK 233 (846)
T ss_pred CcEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCC-eEEEEEEe
Confidence 79999999999888776443333 457777654 55556555 88998887
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.032 Score=63.45 Aligned_cols=246 Identities=11% Similarity=0.129 Sum_probs=135.3
Q ss_pred eEEEEEcCCCCEEEEE-ecC----ceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeecc-C----------CCeE
Q psy10114 558 VTSVAWNERGNLVAVG-THH----GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGS-R----------DRMI 619 (819)
Q Consensus 558 VtsLafSpdG~~LAsG-s~D----GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS-~----------DGtI 619 (819)
+...+++|+|+++|.+ +.. ..+++.|+++|+.+...-... ....+.| +++.++... . ...|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 3467899999999876 333 359999999998765432111 1223889 344443332 1 3457
Q ss_pred EEEECCCCCccceEEEecccCC--eEEEEECCCCCEEEEEEC---C-CeEEEEECCCC----ceeEEEecCCCCEEEEEE
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQE--VCGLKWSPDNQYLASGGN---D-NRLYVWNLHSM----SPLQTYTEHLAAVKAIAW 689 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~--VtsLafSpdg~~LaSGS~---D-GtI~IWDl~t~----~~i~t~~~h~~~VtsLaf 689 (819)
+.|++.++...-...+...... ...+..++|+++++..+. + ..+.+.|...+ .....+......+....-
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~ 284 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVD 284 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEE
Confidence 8888877664433444443332 678889999998775443 2 35888898875 233333333334433332
Q ss_pred cCCCCeEEEEEccCCCCeEEEEECCCCce---e-EEEcCCCCeEEEEEccCCCEEEEEEecCC--CeEEEEECCCCcEEE
Q psy10114 690 SPHHHGLLASGGGTADRCIRFWNTLTGQP---M-QCVDTGSQVCNLAWSKHSSELVSTHGYSQ--NQILVWKYPTLTQVA 763 (819)
Q Consensus 690 SPdg~~LLaSGgGs~DgtIrIWDl~tg~~---v-~~l~~~s~V~sLafSpdg~~LastsGssD--g~I~IWDl~s~k~l~ 763 (819)
+..+..++.+..+..++.|.-.++.+... . ..+.+...+.-..+...++.|+.. ...+ ..|.+++...+....
T Consensus 285 ~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~-~~~~~~~~l~v~~~~~~~~~~ 363 (414)
T PF02897_consen 285 HHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLS-YRENGSSRLRVYDLDDGKESR 363 (414)
T ss_dssp EETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEE-EEETTEEEEEEEETT-TEEEE
T ss_pred ccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEE-EEECCccEEEEEECCCCcEEe
Confidence 33444555554445667888888887653 2 233444433333334455666653 2233 468899988444444
Q ss_pred EEec-CCCCEEEEEEecCCCEEE-EEeC---CCcEEEEECCCCceec
Q psy10114 764 KLTG-HSYRVLYLAMSPDGEAIV-TGAG---DETLRFWNVFSKVRSQ 805 (819)
Q Consensus 764 sl~g-H~~~VtsLafSpDG~~La-SGS~---DGtIrIWdl~s~~~~~ 805 (819)
.+.. -.+.|..+...+++..+. +-++ -+++.-+|+.+++...
T Consensus 364 ~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~ 410 (414)
T PF02897_consen 364 EIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTL 410 (414)
T ss_dssp EEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEE
T ss_pred eecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEE
Confidence 4443 344466666556655443 2222 3678888998887543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.034 Score=63.87 Aligned_cols=194 Identities=13% Similarity=0.152 Sum_probs=105.2
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce------EEEEEecCCCCeEEEEeCC
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------QVHKLVGHTARVGALAWNG 607 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk------~i~tl~gHs~~V~sLawng 607 (819)
.|.+|+.....+.. ..+.. +.+.++.|+.+. .|++-..||.++++|+.... .+....-....+.+..+.+
T Consensus 62 ~I~iys~sG~ll~~-i~w~~--~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSSGKLLSS-IPWDS--GRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCCCCEeEE-EEECC--CCEEEEEECCCC-eEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCC
Confidence 58899876554433 44543 799999999865 55566789999999986322 1111111222333333321
Q ss_pred ceeeeccCCCeEEEEE-CCCCCc-cceEEEec-----ccC-CeE-EEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe
Q psy10114 608 DMLSSGSRDRMILQRD-VRTPNS-QSERRLVG-----HRQ-EVC-GLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 608 ~~LaSGS~DGtI~IWD-i~t~~~-~~v~~l~g-----H~~-~Vt-sLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~ 678 (819)
+-++.-..++.+.+.. ...+.. ........ +.. ... ...++.+....+....++.+.+.+-...+. +
T Consensus 138 ~GivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i- 213 (410)
T PF04841_consen 138 NGIVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I- 213 (410)
T ss_pred CCEEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c-
Confidence 2233233344444332 222100 00000000 000 000 022444555555555556666444332211 1
Q ss_pred cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC--CCeEEEEEccCCC
Q psy10114 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSS 738 (819)
Q Consensus 679 ~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg~ 738 (819)
...+++..++.||+++.++.-. .+|.+.+.+..-.+....++.+ .....+.|.-+..
T Consensus 214 ~~~~~i~~iavSpng~~iAl~t---~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 214 DSDGPIIKIAVSPNGKFIALFT---DSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred cCCCCeEEEEECCCCCEEEEEE---CCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 1346899999999999776654 6799999887767777666655 5677888865543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=1.2e-05 Score=92.67 Aligned_cols=198 Identities=21% Similarity=0.333 Sum_probs=132.6
Q ss_pred CcceEEEEEecC--C--eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEe----cCceEEEe
Q psy10114 512 DDFYLNLVDWSS--Q--NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGT----HHGYVQVW 582 (819)
Q Consensus 512 dDfyv~~ldwS~--~--~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs----~DGtI~IW 582 (819)
+.-|+.+++|.- + .+++|..+|.|.+-+........-....++....++++|++ |.++||+|- .|..+.||
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 334566666652 1 25566677889888775433221113456778999999998 567888874 46789999
Q ss_pred ecCCc----eEEEEEec-CCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEE
Q psy10114 583 DVSVA----KQVHKLVG-HTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYL 654 (819)
Q Consensus 583 Dl~tg----k~i~tl~g-Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~L 654 (819)
|+.++ +.-..+.+ -.....+++| +...+.+|...+.+.++|++.... ....-.+..+.++..+| .++++
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~---~~~svnTk~vqG~tVdp~~~nY~ 211 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD---SVSSVNTKYVQGITVDPFSPNYF 211 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhh---hhhhhhhhhcccceecCCCCCce
Confidence 99876 12222222 3345568888 566888999999999999985321 22222345677788888 77888
Q ss_pred EEEECCCeEEEEEC-CCC-ceeEEEecC----CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC
Q psy10114 655 ASGGNDNRLYVWNL-HSM-SPLQTYTEH----LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 655 aSGS~DGtI~IWDl-~t~-~~i~t~~~h----~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~ 714 (819)
++-. ||.|.+||. ++- .++..+... ...+..++|+|....++++.. ...++|+.+|+.
T Consensus 212 cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~-RdS~tIrlydi~ 275 (783)
T KOG1008|consen 212 CSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLS-RDSITIRLYDIC 275 (783)
T ss_pred eccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhc-cCcceEEEeccc
Confidence 7765 899999993 332 233333222 235899999999888877764 356889999986
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.031 Score=59.64 Aligned_cols=226 Identities=19% Similarity=0.213 Sum_probs=135.9
Q ss_pred cCCeEEEEECCCeEEEEEc-CCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE--------
Q psy10114 522 SSQNVLSVGLGSCVYLWSA-CTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK-------- 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~-~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t-------- 592 (819)
.++.++.|..+| +++++. ...+..++.. ...|..+...++-+.+++-+ ||.+.++++..-.....
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~----~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILK----LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEee----cceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccc
Confidence 467788887777 999998 3344444333 23499999999877776665 49999999875433321
Q ss_pred ------EecCCCCeEEEE----eCCceeeeccCCCeEEEEECCCCCc---cceEEEecccCCeEEEEECCCCCEEEEEEC
Q psy10114 593 ------LVGHTARVGALA----WNGDMLSSGSRDRMILQRDVRTPNS---QSERRLVGHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 593 ------l~gHs~~V~sLa----wng~~LaSGS~DGtI~IWDi~t~~~---~~v~~l~gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
.......+...+ ..+...+.....+.|.+|....... .....+ .-.+.+.+++|. ++.++.|..
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~-~lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI-SLPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE-EcCCCcEEEEEe--CCEEEEEeC
Confidence 112233455555 1333333444445888888876421 122332 344788899998 667887775
Q ss_pred CCeEEEEECCCCceeEEEecC------------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE--EEcCC
Q psy10114 660 DNRLYVWNLHSMSPLQTYTEH------------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ--CVDTG 725 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t~~~h------------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~--~l~~~ 725 (819)
+ ...+.|+.++.....+... ..++..+... ++..+++ .|..-.+.|. .|+..+ .+.-.
T Consensus 157 ~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~-----~~~~g~fv~~-~G~~~r~~~i~W~ 228 (275)
T PF00780_consen 157 K-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLC-----YDNIGVFVNK-NGEPSRKSTIQWS 228 (275)
T ss_pred C-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEE-----ecceEEEEcC-CCCcCcccEEEcC
Confidence 4 5788899877654443211 1233334433 3444443 3555555554 444333 33444
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS 769 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~ 769 (819)
....++++ ...++++. .++.|.|+++.+++.++++....
T Consensus 229 ~~p~~~~~--~~pyli~~---~~~~iEV~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 229 SAPQSVAY--SSPYLIAF---SSNSIEVRSLETGELVQTIPLPN 267 (275)
T ss_pred CchhEEEE--ECCEEEEE---CCCEEEEEECcCCcEEEEEECCC
Confidence 55666666 34577763 35779999999999998887543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0028 Score=72.96 Aligned_cols=188 Identities=19% Similarity=0.271 Sum_probs=120.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe---cC-ceEEEeecCCceEEEEEecCCCCeEEEEe--CCc-eeeeccCCCe--EEEEE
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGT---HH-GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGD-MLSSGSRDRM--ILQRD 623 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs---~D-GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~-~LaSGS~DGt--I~IWD 623 (819)
.....+..-+|+++++.++..+ .. ..+.++|+++++...... ..+.-..-+| +|. .+++...||. |.+.|
T Consensus 190 ~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~d 268 (425)
T COG0823 190 DSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMD 268 (425)
T ss_pred ccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEc
Confidence 3456778889999998766542 22 468999999886655444 1122223445 555 4456666775 45556
Q ss_pred CCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC---eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEE
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN---RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG---tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSG 700 (819)
+.+... ..+....+.-+.=.|+|||+.++..+..+ .|.+.|.+.+.. ..+....+.-..-.|+|+|+.++..+
T Consensus 269 l~~~~~---~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~ 344 (425)
T COG0823 269 LDGKNL---PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFES 344 (425)
T ss_pred CCCCcc---eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEe
Confidence 666552 23333333334667999999988776543 477778776655 44443333333788999999998887
Q ss_pred ccCCCCe--EEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC
Q psy10114 701 GGTADRC--IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 701 gGs~Dgt--IrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss 747 (819)
. .+|. |.+.|..++...+.+........-.|.++|+.+...++..
T Consensus 345 ~--~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~ 391 (425)
T COG0823 345 S--SGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSGQG 391 (425)
T ss_pred c--cCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEeccCC
Confidence 3 3454 7777777766566666666666778889999888865433
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.071 Score=60.26 Aligned_cols=278 Identities=16% Similarity=0.168 Sum_probs=134.8
Q ss_pred ceEEEEEecCCeEEEEEC-C--CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 514 FYLNLVDWSSQNVLSVGL-G--SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~-D--g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
|+-+++.-+|+.++.++. + ..+++-|+.+++..++.+..+. ......++++++.++-...+..|+-.|+++.+..
T Consensus 38 F~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~--~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~ 115 (386)
T PF14583_consen 38 FYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGD--NTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER 115 (386)
T ss_dssp TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B---TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE
T ss_pred ecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCC--CccceEEecCCCeEEEEECCCeEEEEECCcCcEE
Confidence 344444445666665554 3 5688889999998887664432 1224566788888766655668888999998776
Q ss_pred EEEecCCCCeEEEEe--C-Cceeeec-----------------------cCCCeEEEEECCCCCccceEEEecccCCeEE
Q psy10114 591 HKLVGHTARVGALAW--N-GDMLSSG-----------------------SRDRMILQRDVRTPNSQSERRLVGHRQEVCG 644 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw--n-g~~LaSG-----------------------S~DGtI~IWDi~t~~~~~v~~l~gH~~~Vts 644 (819)
..+.....-+....| + +...++| .-...|.--|+.+++. ..+......+.-
T Consensus 116 ~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~---~~v~~~~~wlgH 192 (386)
T PF14583_consen 116 VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGER---KVVFEDTDWLGH 192 (386)
T ss_dssp EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--E---EEEEEESS-EEE
T ss_pred EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCce---eEEEecCccccC
Confidence 666655665555555 2 1122222 1123455567766553 333334556777
Q ss_pred EEECCCCC-EEEEEEC---CC-eEEEEECCC-CceeEEEecC--CCCEEEEEEcCCCCeEEEEEc--cCCCCeEEEEECC
Q psy10114 645 LKWSPDNQ-YLASGGN---DN-RLYVWNLHS-MSPLQTYTEH--LAAVKAIAWSPHHHGLLASGG--GTADRCIRFWNTL 714 (819)
Q Consensus 645 LafSpdg~-~LaSGS~---DG-tI~IWDl~t-~~~i~t~~~h--~~~VtsLafSPdg~~LLaSGg--Gs~DgtIrIWDl~ 714 (819)
+.|+|... .++.|-+ |. .-+||-+++ +...+.+..+ ...+.-=-|.|+|..+...+. |..+..|.-+|..
T Consensus 193 ~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~ 272 (386)
T PF14583_consen 193 VQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPD 272 (386)
T ss_dssp EEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TT
T ss_pred cccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCC
Confidence 88999554 4444433 22 135665532 3333333333 233445578999998877542 3356678889999
Q ss_pred CCceeEEEcCCCCeEEEEEccCCCEEEEEEecC--------------CCeEEEEECCCCcEEEEEecCCC----------
Q psy10114 715 TGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS--------------QNQILVWKYPTLTQVAKLTGHSY---------- 770 (819)
Q Consensus 715 tg~~v~~l~~~s~V~sLafSpdg~~LastsGss--------------Dg~I~IWDl~s~k~l~sl~gH~~---------- 770 (819)
+++....... .....+.-++||+.++-=++.. +--|.+++...++.. .+..|..
T Consensus 273 t~~~~~~~~~-p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~-~l~~h~~sw~v~~~~~q 350 (386)
T PF14583_consen 273 TGERRRLMEM-PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFR-KLARHDTSWKVLDGDRQ 350 (386)
T ss_dssp T--EEEEEEE--SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEE-EEEE-------BTTBSS
T ss_pred CCCceEEEeC-CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCcee-eeeeccCcceeecCCCc
Confidence 8876443322 2355666778888877642211 114566777765543 2222321
Q ss_pred -CEEEEEEecCCCEEEE-EeCCCcEEEEEC
Q psy10114 771 -RVLYLAMSPDGEAIVT-GAGDETLRFWNV 798 (819)
Q Consensus 771 -~VtsLafSpDG~~LaS-GS~DGtIrIWdl 798 (819)
.=-...|||||+.++- +..+|...||-+
T Consensus 351 ~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 351 VTHPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp TT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred cCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 1245899999998765 555777766644
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.021 Score=63.43 Aligned_cols=234 Identities=14% Similarity=0.117 Sum_probs=145.6
Q ss_pred CCeEEEEEcCCCceEEEEeccCC-C----CCeEEEEEcCCCCEEEEEec--CceEEEeecCCceEEEEEecCCCCeEEEE
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSAD-G----NSVTSVAWNERGNLVAVGTH--HGYVQVWDVSVAKQVHKLVGHTARVGALA 604 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h-~----~~VtsLafSpdG~~LAsGs~--DGtI~IWDl~tgk~i~tl~gHs~~V~sLa 604 (819)
...|.+||..+-+...-..+... . ......+++.||+++++..- .-.|.|.|++.++.+.++... .+..+-
T Consensus 66 tDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P--GC~~iy 143 (342)
T PF06433_consen 66 TDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP--GCWLIY 143 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT--SEEEEE
T ss_pred eeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC--CEEEEE
Confidence 34589999998876654455432 1 12234688999999888643 457999999999998887632 222222
Q ss_pred -eCCceeeeccCCCeEEEEECCCCCccceEE---EecccCCe-EEEEECCCCCEEEEEECCCeEEEEECCCCcee--EEE
Q psy10114 605 -WNGDMLSSGSRDRMILQRDVRTPNSQSERR---LVGHRQEV-CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL--QTY 677 (819)
Q Consensus 605 -wng~~LaSGS~DGtI~IWDi~t~~~~~v~~---l~gH~~~V-tsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i--~t~ 677 (819)
+.++.+.+-+.||.+.-..+.......... +....+.+ ..-++...+..++.-+.+|.|+--|+...... ..+
T Consensus 144 P~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~ 223 (342)
T PF06433_consen 144 PSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPW 223 (342)
T ss_dssp EEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEE
T ss_pred ecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcc
Confidence 244578888999999988887543222111 11111112 12234445556666788999999888766532 222
Q ss_pred ec----------CCCCEEEEEEcCCCCeEEEEEc-c----CCC--CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEE
Q psy10114 678 TE----------HLAAVKAIAWSPHHHGLLASGG-G----TAD--RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 678 ~~----------h~~~VtsLafSPdg~~LLaSGg-G----s~D--gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~L 740 (819)
.. -.+.-.-+++++..+.+++.-- | ..| ..|-++|+.+++.+..+..+.++.+++.+.+.+-+
T Consensus 224 ~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~ 303 (342)
T PF06433_consen 224 SLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPL 303 (342)
T ss_dssp ESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-E
T ss_pred cccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcE
Confidence 11 0223345677776665555421 1 111 35888899999999999887888899999988754
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEec
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTG 767 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~g 767 (819)
+.+....++.+.+||..+++.+.++.+
T Consensus 304 L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 304 LYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 443245689999999999999998874
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00066 Score=80.47 Aligned_cols=251 Identities=15% Similarity=0.203 Sum_probs=145.7
Q ss_pred CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCc
Q psy10114 531 LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGD 608 (819)
Q Consensus 531 ~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~ 608 (819)
.+|+|.|+- ++|+..+-.+.+ -.+++++|+|..-.|+.|-.-|.+.+|...+.+.-.....|..++..+.| +|+
T Consensus 39 r~GSVtIfa-dtGEPqr~Vt~P---~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~ 114 (1416)
T KOG3617|consen 39 RGGSVTIFA-DTGEPQRDVTYP---VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGT 114 (1416)
T ss_pred CCceEEEEe-cCCCCCcccccc---eehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCC
Confidence 457888884 455543322222 34678999999999999999999999998887777777789999999999 688
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEeccc--C--CeEEEEECCCCC------EEEEEECCCeEE-EEECCCCceeEEE
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGHR--Q--EVCGLKWSPDNQ------YLASGGNDNRLY-VWNLHSMSPLQTY 677 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~--~--~VtsLafSpdg~------~LaSGS~DGtI~-IWDl~t~~~i~t~ 677 (819)
.++++..-|.+.+|............+-.|. . ..+|...++++. ..++.++++.+- .++.+........
T Consensus 115 ~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~ 194 (1416)
T KOG3617|consen 115 VLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAERSD 194 (1416)
T ss_pred eEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhhccc
Confidence 9999999999999987643222222222222 2 234555566643 234444444332 2222211111111
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE-------------
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH------------- 744 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts------------- 744 (819)
.|. =.|+|..+++++ .+|+|+-.|- +|++......++.| .+-|.+...-++++.
T Consensus 195 -~ks-------gv~~g~~F~~~~---~~GtVyyvdq-~g~~~~V~k~dS~v-QmLf~~~~eai~~i~e~lr~~l~~v~~~ 261 (1416)
T KOG3617|consen 195 -EKS-------GVPKGTEFLFAG---KSGTVYYVDQ-NGRQRTVHKLDSEV-QMLFMGYCEAISIIIEFLRDCLIFVLAK 261 (1416)
T ss_pred -ccc-------CCCCCcEEEEEc---CCceEEEEcC-CCcEEEEEEccchH-HHHHhcccceEEEEeeeceeeEEEecCC
Confidence 111 146677677765 7899988874 45544444333321 111222111111110
Q ss_pred ---------------ecCCCeEEEEECCCC----cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 745 ---------------GYSQNQILVWKYPTL----TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 745 ---------------GssDg~I~IWDl~s~----k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
|+.+|.|..=.. +| .+...+ .....+++++++..+..++.|...|.+.+|.-..
T Consensus 262 G~~ee~~~vk~sgk~GgrqGgiA~sEs-sGvLr~~eKyg~-e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~ 334 (1416)
T KOG3617|consen 262 GTSEERCAVKVSGKLGGRQGGIACSES-SGVLRKSEKYGL-ELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVN 334 (1416)
T ss_pred CchHHhhhhhhccccCCccCccccccc-cccccCCcchhh-hcCCceEEEEEeccceEEEecccCCcEEEeeecC
Confidence 111222111110 00 000000 1235689999999999999999999999996433
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0029 Score=72.81 Aligned_cols=166 Identities=20% Similarity=0.253 Sum_probs=106.8
Q ss_pred CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CCC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCC
Q psy10114 617 RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-NDN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHH 693 (819)
Q Consensus 617 GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg 693 (819)
..+.++|+.+++...+..+.++. ..-+|+|||+.++.+. .|| .|++.|+.+++ ...+....+.-..-.|+|+|
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG 293 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDG 293 (425)
T ss_pred ceEEEEeccCCccceeeccCCcc---CCccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCC
Confidence 56999999998766555555444 3467999999887654 455 47788887776 33455444444577899999
Q ss_pred CeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCe--EEEEECCCCcEEEEEecCCCC
Q psy10114 694 HGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQ--ILVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 694 ~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~--I~IWDl~s~k~l~sl~gH~~~ 771 (819)
+.++.+.+...--.|.+.|...+...+.......-..-.|+|||+.++... ..+|. |.+.|..++.....+. +...
T Consensus 294 ~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~-~~~g~~~i~~~~~~~~~~~~~lt-~~~~ 371 (425)
T COG0823 294 SKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFES-SSGGQWDIDKNDLASGGKIRILT-STYL 371 (425)
T ss_pred CEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEe-ccCCceeeEEeccCCCCcEEEcc-cccc
Confidence 999988752222356677777666544433333333889999999999975 33455 6677776655433332 2333
Q ss_pred EEEEEEecCCCEEEEEe
Q psy10114 772 VLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS 788 (819)
...-++.++|+.++..+
T Consensus 372 ~e~ps~~~ng~~i~~~s 388 (425)
T COG0823 372 NESPSWAPNGRMIMFSS 388 (425)
T ss_pred CCCCCcCCCCceEEEec
Confidence 34456666776665433
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.073 Score=56.73 Aligned_cols=259 Identities=13% Similarity=0.112 Sum_probs=132.6
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeE-EEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCe
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVT-SVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARV 600 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~Vt-sLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V 600 (819)
-++.++.|+..|.+++-+..+|+........ +.|. .....+++..+..|+.|++....|..+..++...+...+..
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~---~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f 138 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL---ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTF 138 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeeh---hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCcee
Confidence 4678999999999999999999543322221 2232 23456789999999999999999999999988876433322
Q ss_pred EEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEeccc--CCeEE--EEECCCCCEEEEEECCCeEEEEECCCCcee
Q psy10114 601 GALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR--QEVCG--LKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674 (819)
Q Consensus 601 ~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~--~~Vts--LafSpdg~~LaSGS~DGtI~IWDl~t~~~i 674 (819)
.+-+.+ ...|..+...|.+.--....... ..+-.|+ ++|.+ ++ -+..+..+.-||.+.-+| ..|+.+
T Consensus 139 ~sP~i~~g~~sly~a~t~G~vlavt~~~~~~---~~~w~~~~~~PiF~splc---v~~sv~i~~VdG~l~~f~-~sG~qv 211 (354)
T KOG4649|consen 139 VSPVIAPGDGSLYAAITAGAVLAVTKNPYSS---TEFWAATRFGPIFASPLC---VGSSVIITTVDGVLTSFD-ESGRQV 211 (354)
T ss_pred ccceecCCCceEEEEeccceEEEEccCCCCc---ceehhhhcCCccccCcee---ccceEEEEEeccEEEEEc-CCCcEE
Confidence 222222 33445555555555444433211 1111111 11111 11 133455556667766666 455555
Q ss_pred EEEecCCCCEEE-EEEc-CCCCeEEEEEccCCCC--------eEEEEECCCCceeEEEcCCCCeEEEEEc-cC---CCEE
Q psy10114 675 QTYTEHLAAVKA-IAWS-PHHHGLLASGGGTADR--------CIRFWNTLTGQPMQCVDTGSQVCNLAWS-KH---SSEL 740 (819)
Q Consensus 675 ~t~~~h~~~Vts-LafS-Pdg~~LLaSGgGs~Dg--------tIrIWDl~tg~~v~~l~~~s~V~sLafS-pd---g~~L 740 (819)
.++.. .++|.. -+-+ |..+.+. .+. .+. .-.+|..++|......-... ...+++ +. .+.+
T Consensus 212 wr~~t-~GpIf~~Pc~s~Ps~q~i~-~~~--~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~--l~F~~h~~~~S~~~ll 285 (354)
T KOG4649|consen 212 WRPAT-KGPIFMEPCESRPSCQQIS-LEN--ENCFCAPLPIAGHLLWATQSGTTLHVYLSPK--LRFDLHSPGISYPKLL 285 (354)
T ss_pred EeecC-CCceecccccCCCcceEEE-Eec--CCeEEEeccccceEEEEecCCcEEEEEeCcc--cceeccCCCCcchhhh
Confidence 54432 222211 1111 2212121 111 121 22355555553333221110 011111 11 1233
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEE--------E-ec---CCCEEEEEeCCCcEEEEECCCC
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA--------M-SP---DGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLa--------f-Sp---DG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.. .+.||.+.+...+ +.+.+...|.+.+..+. | || +| .|+.|+.|..|+-||+.+.
T Consensus 286 ~~--~s~dgkv~il~~~--~sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~g-rl~igcRDdYv~cldl~~~ 353 (354)
T KOG4649|consen 286 RR--SSGDGKVMILMTS--KSLAEISSNGGELQNLEAIELSNEIFSSPVIIDG-RLLIGCRDDYVRCLDLDTW 353 (354)
T ss_pred hh--hcCCCcEEEEEec--ccccccccCCCccceEEEeecCcccccCCeEEcc-EEEEEEccCeEEEEecccc
Confidence 33 5578888777432 22444444444333322 2 22 44 5777999999999999764
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0063 Score=70.69 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=90.4
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEE----ecCceE----EEeecCCceE--EEEE-ecCCCCeE
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVG----THHGYV----QVWDVSVAKQ--VHKL-VGHTARVG 601 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsG----s~DGtI----~IWDl~tgk~--i~tl-~gHs~~V~ 601 (819)
.+.++....++.+.++..... ....++.||. ++..+.+. +.+|.+ .+|++..++. +... -...+.|.
T Consensus 185 Nl~L~~~~~~klEvL~yirTE-~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~ 263 (545)
T PF11768_consen 185 NLHLLSCSGGKLEVLSYIRTE-NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVI 263 (545)
T ss_pred cEEEEEecCCcEEEEEEEEec-CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcce
Confidence 455555555555555544443 3346778876 44455543 234443 4677655432 2111 25677888
Q ss_pred EEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 602 ALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 602 sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
|.+++ .+.++.|+.||+|.+||...+. .......-..+.++|+|+|..+++|+..|.+.+||+.-.
T Consensus 264 ~ca~sp~E~kLvlGC~DgSiiLyD~~~~~----t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 264 CCARSPSEDKLVLGCEDGSIILYDTTRGV----TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred EEecCcccceEEEEecCCeEEEEEcCCCe----eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 99994 6799999999999999997753 223344556789999999999999999999999998543
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.50 E-value=3.3e-05 Score=89.18 Aligned_cols=196 Identities=20% Similarity=0.391 Sum_probs=129.8
Q ss_pred CCeEEEEe----CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEE----CCCeEEEEEC
Q psy10114 598 ARVGALAW----NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGG----NDNRLYVWNL 668 (819)
Q Consensus 598 ~~V~sLaw----ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS----~DGtI~IWDl 668 (819)
..+.|+++ +..++++|..+|.|.+-.++...........++....++++|++ |.+.||.|- .|..+.|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 44556666 23478999999999999988776554566778888999999998 666777774 3567999999
Q ss_pred CCC--ceeEE--Eec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEEcCCCCeEEEEEcc-CCCEEE
Q psy10114 669 HSM--SPLQT--YTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCVDTGSQVCNLAWSK-HSSELV 741 (819)
Q Consensus 669 ~t~--~~i~t--~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l~~~s~V~sLafSp-dg~~La 741 (819)
.++ .|... |.+ ......+++|..+.+ ++.+|. ..+.+.++|++... ....+. ...+..+..+| .+++++
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~k-lvlaGm--~sr~~~ifdlRqs~~~~~svn-Tk~vqG~tVdp~~~nY~c 212 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTK-LVLAGM--TSRSVHIFDLRQSLDSVSSVN-TKYVQGITVDPFSPNYFC 212 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcc-hhhccc--ccchhhhhhhhhhhhhhhhhh-hhhcccceecCCCCCcee
Confidence 876 33221 222 334456889986666 555543 77899999998432 222222 23466777788 677777
Q ss_pred EEEecCCCeEEEEE-CCCCcE-EEEEecC----CCCEEEEEEecCC-CEEEEEeC-CCcEEEEECCC
Q psy10114 742 STHGYSQNQILVWK-YPTLTQ-VAKLTGH----SYRVLYLAMSPDG-EAIVTGAG-DETLRFWNVFS 800 (819)
Q Consensus 742 stsGssDg~I~IWD-l~s~k~-l~sl~gH----~~~VtsLafSpDG-~~LaSGS~-DGtIrIWdl~s 800 (819)
+ +.||.|.+|| ..+.+. +..+... ...+..++|+|.. ..+++... .++|+.+++..
T Consensus 213 s---~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 213 S---NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred c---cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 5 4699999999 333222 2222211 2248999999943 24455444 57899999853
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.09 Score=62.38 Aligned_cols=244 Identities=15% Similarity=0.168 Sum_probs=140.5
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--CCeEEEEEcCCCCEEEEEec------CceEEEeecCCceEEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--NSVTSVAWNERGNLVAVGTH------HGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--~~VtsLafSpdG~~LAsGs~------DGtI~IWDl~tgk~i~tl 593 (819)
.++.++.++.++.+.-.|..+|+..-......+. ..+++--.--++ .++++.. +|.|.-+|.++|+.+.++
T Consensus 119 ~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~ 197 (527)
T TIGR03075 119 YDGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRR 197 (527)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEec
Confidence 4567888888999999999999875433332211 112211111133 5556543 689999999999988765
Q ss_pred ecCCC-------------------------------CeE-EEEeCC--ceeeeccC-----C-----------CeEEEEE
Q psy10114 594 VGHTA-------------------------------RVG-ALAWNG--DMLSSGSR-----D-----------RMILQRD 623 (819)
Q Consensus 594 ~gHs~-------------------------------~V~-sLawng--~~LaSGS~-----D-----------GtI~IWD 623 (819)
..-.. .+. .+++|. +++..+.. + .+|.-.|
T Consensus 198 ~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld 277 (527)
T TIGR03075 198 YTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARD 277 (527)
T ss_pred cCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEc
Confidence 42111 111 123332 23333321 1 1677778
Q ss_pred CCCCCccceEEEecccC-------CeEEEEECCCCC---EEEEEECCCeEEEEECCCCceeEEEe--c----------CC
Q psy10114 624 VRTPNSQSERRLVGHRQ-------EVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYT--E----------HL 681 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~-------~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~--~----------h~ 681 (819)
+++++..-......|.. ...-+....+|+ .++.++.+|.+++.|.++++++...+ . ..
T Consensus 278 ~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~ 357 (527)
T TIGR03075 278 PDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKT 357 (527)
T ss_pred cccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCC
Confidence 88877544443333321 112233334666 77889999999999999998762210 0 00
Q ss_pred -CCE----------------------------EEEEEcCCCCeEEEEEcc------------------------------
Q psy10114 682 -AAV----------------------------KAIAWSPHHHGLLASGGG------------------------------ 702 (819)
Q Consensus 682 -~~V----------------------------tsLafSPdg~~LLaSGgG------------------------------ 702 (819)
.++ ..++++|+...+++-...
T Consensus 358 g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~ 437 (527)
T TIGR03075 358 GRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPD 437 (527)
T ss_pred CCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCC
Confidence 000 114566655544332210
Q ss_pred CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC
Q psy10114 703 TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH 768 (819)
..-+.+.-+|+.+|+.........+...-...-.+..++. +..+|.++.+|.++|+.+.+.+-.
T Consensus 438 ~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~--g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 438 DHMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFY--GTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred CCceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEE--ECCCCeEEEEECCCCCEeEEEeCC
Confidence 0125688889999988877754433211112234455555 778999999999999999888744
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.028 Score=61.89 Aligned_cols=211 Identities=17% Similarity=0.171 Sum_probs=123.5
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEE---EcCC----CCEEEEEec----------CceEEEeecCCc----eEEE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVA---WNER----GNLVAVGTH----------HGYVQVWDVSVA----KQVH 591 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLa---fSpd----G~~LAsGs~----------DGtI~IWDl~tg----k~i~ 591 (819)
+.|++.|..+.+......+.. ...+++++ +..+ ..++++|+. .|.|.++++.+. ..+.
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~-~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~ 80 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEP-NEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK 80 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEET-TEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred cEEEEEeCCCCeEEEEEECCC-CceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence 468899998888777777764 34555544 3332 468888863 299999999884 2232
Q ss_pred EE--ecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCC-ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 592 KL--VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPN-SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 592 tl--~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~-~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
.+ ....++|.+++--++.|++|. ++.|.+|++...+ ....... .....+.++... +++++.|.....+.++..
T Consensus 81 ~i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~-~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 81 LIHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFY-DSPFYITSLSVF--KNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp EEEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE--BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred EEEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccchhhhee-cceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence 22 245788999988444444443 4789999998877 3222222 223356666654 669999998888887744
Q ss_pred CC-CceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-------Cc----eeEEEcCCCCeEEE---
Q psy10114 669 HS-MSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-------GQ----PMQCVDTGSQVCNL--- 731 (819)
Q Consensus 669 ~t-~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-------g~----~v~~l~~~s~V~sL--- 731 (819)
+. ...+..+. .....+.++.+-++++.+++ +. .+|.+.++.... +. ....+..+..|+++
T Consensus 157 ~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~-~D--~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~ 233 (321)
T PF03178_consen 157 DEENNKLILVARDYQPRWVTAAEFLVDEDTIIV-GD--KDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRG 233 (321)
T ss_dssp ETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEE-EE--TTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE-
T ss_pred EccCCEEEEEEecCCCccEEEEEEecCCcEEEE-Ec--CCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEE
Confidence 33 22222222 23556888999877664444 33 799999987652 22 23445667778877
Q ss_pred EEcc--CCCE------EEEEEecCCCeEEE
Q psy10114 732 AWSK--HSSE------LVSTHGYSQNQILV 753 (819)
Q Consensus 732 afSp--dg~~------LastsGssDg~I~I 753 (819)
++.+ .+.. ++. ++.+|.|-.
T Consensus 234 ~l~~~~~~~~~~~~~~i~~--~T~~G~Ig~ 261 (321)
T PF03178_consen 234 SLIPRSGSSESPNRPQILY--GTVDGSIGV 261 (321)
T ss_dssp -SS--SSSS-TTEEEEEEE--EETTS-EEE
T ss_pred EeeecCCCCcccccceEEE--EecCCEEEE
Confidence 4444 2222 444 556777663
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.092 Score=56.05 Aligned_cols=224 Identities=14% Similarity=0.128 Sum_probs=124.8
Q ss_pred CCCCEEEEEecCceEEEeecCCc-eEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEE-------
Q psy10114 565 ERGNLVAVGTHHGYVQVWDVSVA-KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERR------- 634 (819)
Q Consensus 565 pdG~~LAsGs~DGtI~IWDl~tg-k~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~------- 634 (819)
..++.|++|+.+| +.+++.... +..+..+ ...|..+..- -+.+++-+ |+.+.++++..-.......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 4578999999999 899998332 3333222 2238888873 34444433 4999999987644322110
Q ss_pred -----EecccCCeEEEE--ECCCCCEEEEEECCCeEEEEECCCC-----ceeEEEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 635 -----LVGHRQEVCGLK--WSPDNQYLASGGNDNRLYVWNLHSM-----SPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 635 -----l~gH~~~VtsLa--fSpdg~~LaSGS~DGtI~IWDl~t~-----~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
.......+...+ -...+...+......+|.+|..... +..+.+. -...+.+++|.+ +.+++ |
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~--~~i~v-~-- 154 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG--NKICV-G-- 154 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC--CEEEE-E--
Confidence 111222344433 1123333444444558888887653 3445554 357788999983 33444 3
Q ss_pred CCCCeEEEEECCCCceeEEEcCC-------------CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE--EEec
Q psy10114 703 TADRCIRFWNTLTGQPMQCVDTG-------------SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA--KLTG 767 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~~~-------------s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~--sl~g 767 (819)
..+...+.|+.++......... .++..+.. +++.++++ + +..-.+.|. .|+... .+.-
T Consensus 155 -~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~---~-~~~g~fv~~-~G~~~r~~~i~W 227 (275)
T PF00780_consen 155 -TSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLC---Y-DNIGVFVNK-NGEPSRKSTIQW 227 (275)
T ss_pred -eCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEE---e-cceEEEEcC-CCCcCcccEEEc
Confidence 3566889999977665443221 12333333 33445544 2 233333343 444332 2322
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccccc
Q psy10114 768 HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESK 809 (819)
Q Consensus 768 H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~~~ 809 (819)
...+.++++. ..+|+..+. +.|.||++.+++..+...-
T Consensus 228 -~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~~ 265 (275)
T PF00780_consen 228 -SSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIPL 265 (275)
T ss_pred -CCchhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEEC
Confidence 3356677774 457776655 5699999999987766543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0097 Score=66.27 Aligned_cols=232 Identities=15% Similarity=0.139 Sum_probs=131.1
Q ss_pred EEEEEecC---CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceE-E
Q psy10114 516 LNLVDWSS---QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQ-V 590 (819)
Q Consensus 516 v~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~-i 590 (819)
+..+++++ +.+..++.+..|+|.|+++......+. .+ ..+.+++|.-|. ++|..|..+|.|.|||+...+- +
T Consensus 196 IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~--a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~ 272 (463)
T KOG1645|consen 196 IRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYI--AY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPL 272 (463)
T ss_pred hhhhccCccccceeeeeccCceEEEEecccceeeehee--cc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCchH
Confidence 33444553 347788999999999999987665443 33 789999999865 6788888999999999976432 2
Q ss_pred EEEec--CCCCeEEEEe--------CCceeeeccCCCeEEEEECCCCCccceEEEe-cccCCeEEEEECCCCCEEEEEEC
Q psy10114 591 HKLVG--HTARVGALAW--------NGDMLSSGSRDRMILQRDVRTPNSQSERRLV-GHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 591 ~tl~g--Hs~~V~sLaw--------ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
..+.+ ...+|..++. .+..|+..+.+ ...|++..........+. +..+...++...+..+.++....
T Consensus 273 ~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~tyR 350 (463)
T KOG1645|consen 273 MELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLLTYR 350 (463)
T ss_pred hhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccceEEEEec
Confidence 22221 2334444444 23344433333 334554432221111111 12334445555554444433322
Q ss_pred CC-------eEE-EEECCCCceeEEEec-C-------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 660 DN-------RLY-VWNLHSMSPLQTYTE-H-------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 660 DG-------tI~-IWDl~t~~~i~t~~~-h-------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
.+ .+. --|-.+|.++...+. + ...-.++.-.++...++..|+ ..+.+.+||..+++.++.+.
T Consensus 351 s~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd--~tn~lil~D~~s~evvQ~l~ 428 (463)
T KOG1645|consen 351 SNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGD--STNELILQDPHSFEVVQTLA 428 (463)
T ss_pred CCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecC--CcceeEEeccchhheeeecc
Confidence 10 010 112233333322211 1 001122333455666666654 78899999999999999998
Q ss_pred CCCCeEEEEEcc-C-CCEEEEEEecCCCeEEEEECC
Q psy10114 724 TGSQVCNLAWSK-H-SSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 724 ~~s~V~sLafSp-d-g~~LastsGssDg~I~IWDl~ 757 (819)
...+|..++... + +.+|++. .|..++|+..+
T Consensus 429 ~~epv~Dicp~~~n~~syLa~L---Td~~v~Iyk~e 461 (463)
T KOG1645|consen 429 LSEPVLDICPNDTNGSSYLALL---TDDRVHIYKNE 461 (463)
T ss_pred cCcceeecceeecCCcchhhhe---ecceEEEEecC
Confidence 888888876544 2 3355543 47788888754
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.046 Score=62.49 Aligned_cols=186 Identities=13% Similarity=0.145 Sum_probs=103.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe--c------CCCCeEEEEe-----CCc-----eeeeccC
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV--G------HTARVGALAW-----NGD-----MLSSGSR 615 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~--g------Hs~~V~sLaw-----ng~-----~LaSGS~ 615 (819)
..++|++++.|.-| ++|+|..+|.+.|.|++....+..-. . ....|+++.| .++ .+++|..
T Consensus 85 ~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 85 KQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp -S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred cCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 45789999998555 99999999999999998777776532 2 2446888888 222 7889999
Q ss_pred CCeEEEEECCC-CCccceEE----EecccCCeEEEE-ECCCC--------------------CEEEEEECCCeEEEEECC
Q psy10114 616 DRMILQRDVRT-PNSQSERR----LVGHRQEVCGLK-WSPDN--------------------QYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 616 DGtI~IWDi~t-~~~~~v~~----l~gH~~~VtsLa-fSpdg--------------------~~LaSGS~DGtI~IWDl~ 669 (819)
.|.+.+|.+.- ........ ...+.+.|..+. ++.+. ..++....+..++++..-
T Consensus 164 ~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~ 243 (395)
T PF08596_consen 164 SGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPP 243 (395)
T ss_dssp TSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT
T ss_pred CCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCC
Confidence 99999998752 22111111 123445555554 32221 124444556789999998
Q ss_pred CCceeEEEecCCCCEEEEEEc-----CCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC-----CeEEEEEccCCCE
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWS-----PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS-----QVCNLAWSKHSSE 739 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafS-----Pdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s-----~V~sLafSpdg~~ 739 (819)
+.+...+..........+.+- ..+..+++.. .+|.|+++.+-.-+.+....... .+....++++|+.
T Consensus 244 ~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~---~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi 320 (395)
T PF08596_consen 244 KSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLF---NNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDI 320 (395)
T ss_dssp ---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEE---TTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-E
T ss_pred CCcccceeeccccccceEEEEeecccCCceEEEEEE---CCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCE
Confidence 877665554333334444553 2333333333 79999999999988887775432 2445667888886
Q ss_pred EEEE
Q psy10114 740 LVST 743 (819)
Q Consensus 740 Last 743 (819)
++.+
T Consensus 321 ~~~~ 324 (395)
T PF08596_consen 321 FYWT 324 (395)
T ss_dssp EEE-
T ss_pred EEEe
Confidence 6664
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.089 Score=60.45 Aligned_cols=192 Identities=11% Similarity=0.082 Sum_probs=102.1
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccc-----eEEEecccCCeEEEEECCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQS-----ERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~-----v~~l~gH~~~VtsLafSpdg 651 (819)
.|+||+. .|+.+.++.-..+.+.++.| +.+.|+.-..||.++++|+.... +. .....-....+....+..+|
T Consensus 62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~G 139 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKNG 139 (410)
T ss_pred EEEEECC-CCCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCCC
Confidence 4888885 46666666544489999999 46688888999999999986433 10 00001111112222333344
Q ss_pred CEEEEEECCCeEEEEECCCCc-eeEEEecCCC---------CEEE-EEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE
Q psy10114 652 QYLASGGNDNRLYVWNLHSMS-PLQTYTEHLA---------AVKA-IAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ 720 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~-~i~t~~~h~~---------~Vts-LafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~ 720 (819)
++.-..++.+.+.+--... ..+.+..-.. .... ..++.+....+... .++.+.+.+-...+
T Consensus 140 --ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~---~g~~i~~i~~~~~~--- 211 (410)
T PF04841_consen 140 --IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLA---NGETIYIIDENSFK--- 211 (410)
T ss_pred --EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEe---cCCEEEEEEccccc---
Confidence 3333445555544322211 1111111000 0000 22333333223222 34555544432221
Q ss_pred EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC-CCCEEEEEEecCC
Q psy10114 721 CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH-SYRVLYLAMSPDG 781 (819)
Q Consensus 721 ~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH-~~~VtsLafSpDG 781 (819)
.+...+++..++.||+|++++.. ..+|.+.+.+..-.+...++... ......+.|.-++
T Consensus 212 ~i~~~~~i~~iavSpng~~iAl~--t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 212 QIDSDGPIIKIAVSPNGKFIALF--TDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred cccCCCCeEEEEECCCCCEEEEE--ECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 13345689999999999999985 46788988887655565555533 3455666665543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.36 Score=54.86 Aligned_cols=219 Identities=17% Similarity=0.121 Sum_probs=145.9
Q ss_pred CCeEEEEEcCCCCEEEE-EecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC---CCeEEEEECCCCCc
Q psy10114 556 NSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR---DRMILQRDVRTPNS 629 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~---DGtI~IWDi~t~~~ 629 (819)
..-..++.++.+..+++ ...++.|.+.|..+.+......--. .-..+++ +++.+..+.. ++++.+.|..+...
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~ 152 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV 152 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence 34457888888875544 4456899999988777776665222 3334555 5654444433 68888888777553
Q ss_pred cceEEEecccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCCCceeE-E----EecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 630 QSERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHSMSPLQ-T----YTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~DGtI~IWDl~t~~~i~-t----~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
. ........+ ..++++|+|+.+.... .++.|.+.|.+.....+ . .. -...-..++++|+|..+.++..++
T Consensus 153 ~--~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~-~~~~P~~i~v~~~g~~~yV~~~~~ 228 (381)
T COG3391 153 T--ATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVG-VGTGPAGIAVDPDGNRVYVANDGS 228 (381)
T ss_pred E--EEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccc-cCCCCceEEECCCCCEEEEEeccC
Confidence 2 333222233 8999999999666554 78899999976655442 1 11 122336789999999888877644
Q ss_pred CCCeEEEEECCCCceeEE-EcCCC-CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC---CEEEEEEe
Q psy10114 704 ADRCIRFWNTLTGQPMQC-VDTGS-QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY---RVLYLAMS 778 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~-l~~~s-~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~---~VtsLafS 778 (819)
.++.+...|..++..... ...+. ....+..+|+|+.+.+.. ...+.+.+.|..+............ .+..+++.
T Consensus 229 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~-~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~ 307 (381)
T COG3391 229 GSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVAN-SQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAIS 307 (381)
T ss_pred CCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEe-cCCCeEEEEeCCCCceeeeecccccccccceeccce
Confidence 457999999999887665 22222 677889999999999963 3358899999888777766553322 34455554
Q ss_pred cC
Q psy10114 779 PD 780 (819)
Q Consensus 779 pD 780 (819)
+.
T Consensus 308 ~~ 309 (381)
T COG3391 308 PL 309 (381)
T ss_pred ee
Confidence 43
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.006 Score=74.50 Aligned_cols=142 Identities=14% Similarity=0.167 Sum_probs=104.6
Q ss_pred CCEEEEE-ecCceEEEeecCCceEEEEEecCCCC-eEEEEeC-------CceeeeccCCCeEEEEECCCCCccceE---E
Q psy10114 567 GNLVAVG-THHGYVQVWDVSVAKQVHKLVGHTAR-VGALAWN-------GDMLSSGSRDRMILQRDVRTPNSQSER---R 634 (819)
Q Consensus 567 G~~LAsG-s~DGtI~IWDl~tgk~i~tl~gHs~~-V~sLawn-------g~~LaSGS~DGtI~IWDi~t~~~~~v~---~ 634 (819)
.++|... .....|.-.|++.|+.+..+..|... |..++-+ +...+.|-.+..+..||.|-.....+. .
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 3444443 34577899999999999999987654 7777763 446677888899999999975422221 1
Q ss_pred EecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC
Q psy10114 635 LVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713 (819)
Q Consensus 635 l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl 713 (819)
.........|++-+.+| ++|+|+.+|.|++||--..+....+.+-..+|..|..+.||+++++++ +..+.++++
T Consensus 573 ~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc----~tyLlLi~t 646 (794)
T PF08553_consen 573 QYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC----KTYLLLIDT 646 (794)
T ss_pred ccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee----cceEEEEEE
Confidence 11234457788777666 799999999999999544344445566689999999999999999986 678888885
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.037 Score=64.14 Aligned_cols=217 Identities=15% Similarity=0.181 Sum_probs=109.8
Q ss_pred ceEEEEEecC-CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 514 FYLNLVDWSS-QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 514 fyv~~ldwS~-~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
++...++.++ +++++++.+|.-.|+.....+... .+.-...+|..++ .+|+-..+++|.|+.--+.+....
T Consensus 33 ~~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k~-------~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~ 104 (443)
T PF04053_consen 33 IYPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNKA-------FGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKS 104 (443)
T ss_dssp S--SEEEE-TTSSEEEEEETTEEEEEETTTTEEEE-------EEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT--
T ss_pred cCCeeEEECCCCCEEEEEcCCEEEEEEccCCcccc-------cCceeEEEEecCc-cEEEEECCCeEEEEEcCccccceE
Confidence 3444556664 356666888888888855443322 1344578899854 577777788999974323333223
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM- 671 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~- 671 (819)
++.. ..+..+-. |..|...+.+ .|.+||+.+++ .+..+.. ..|..+.|+++|+++|..+.+ .+.+.+....
T Consensus 105 i~~~-~~~~~If~-G~LL~~~~~~-~i~~yDw~~~~--~i~~i~v--~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~ 176 (443)
T PF04053_consen 105 IKLP-FSVEKIFG-GNLLGVKSSD-FICFYDWETGK--LIRRIDV--SAVKYVIWSDDGELVALVTKD-SIYILKYNLEA 176 (443)
T ss_dssp ---S-S-EEEEE--SSSEEEEETT-EEEEE-TTT----EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHH
T ss_pred EcCC-cccceEEc-CcEEEEECCC-CEEEEEhhHcc--eeeEEec--CCCcEEEEECCCCEEEEEeCC-eEEEEEecchh
Confidence 3321 12333333 6666666554 89999999865 3344442 238999999999999998866 6777664332
Q ss_pred ----------ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEE
Q psy10114 672 ----------SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741 (819)
Q Consensus 672 ----------~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~La 741 (819)
.....+.+-...|++.+|..+ .++.+. .+.++. +-+|+.-.....+.++.-+...+..+.++
T Consensus 177 ~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT----~~~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly 248 (443)
T PF04053_consen 177 VAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTT----SNHLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLY 248 (443)
T ss_dssp HHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-----TTEEEE--EETTEEEEEEE-SS--EEEEEETTTTEEE
T ss_pred cccccccCchhceEEEEEecceeEEEEEEcC--EEEEEc----CCeEEE--EEcCCcceEEEcCCceEEEEEEccCCEEE
Confidence 133444443678899999876 455543 236665 44454332222344555555556555666
Q ss_pred EEEecCCCeEEEEEC
Q psy10114 742 STHGYSQNQILVWKY 756 (819)
Q Consensus 742 stsGssDg~I~IWDl 756 (819)
. ...++.+..+.+
T Consensus 249 ~--~Dr~~~v~~~~l 261 (443)
T PF04053_consen 249 L--IDRDGNVISYEL 261 (443)
T ss_dssp E--E-TT--EEEEE-
T ss_pred E--EECCCCEEEEEE
Confidence 5 445555555544
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.25 Score=53.03 Aligned_cols=197 Identities=16% Similarity=0.261 Sum_probs=112.4
Q ss_pred EEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 592 KLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 592 tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
.+.+-...+..++|+ +..+++....+.|...+.+ ++......+.+ .+..-++++..++.++++.-.++.+.++++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 455666679999995 3377778888999888864 33222222333 466889999888876666656899999988
Q ss_pred CCCc------eeEEEe-----cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC---CceeEEE-----c----CC
Q psy10114 669 HSMS------PLQTYT-----EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT---GQPMQCV-----D----TG 725 (819)
Q Consensus 669 ~t~~------~i~t~~-----~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t---g~~v~~l-----~----~~ 725 (819)
.... ....+. .+...+..++|++.++.++++- ...-..++.+.. +..+... . .-
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~k---E~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAK---ERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFV 170 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEE---ESSSEEEEEEESTT-SS--EEEE-HHHH-HT--S
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEe---CCCChhhEEEccccCccceeecccccccccccee
Confidence 4321 112222 2456689999999988888764 344455555543 2222211 1 23
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC---------CCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS---------YRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~---------~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
..+.+++++|....+++. ...+..|..+| .+|+.+..+.-.. ...-+++|.++|+..++ ++-+..+++
T Consensus 171 ~d~S~l~~~p~t~~lliL-S~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlfy~f 247 (248)
T PF06977_consen 171 RDLSGLSYDPRTGHLLIL-SDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPNLFYRF 247 (248)
T ss_dssp S---EEEEETTTTEEEEE-ETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTTEEEEE
T ss_pred ccccceEEcCCCCeEEEE-ECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCceEEEe
Confidence 457899999988887776 56788899999 6777766554221 25788999999965554 555555444
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.041 Score=65.61 Aligned_cols=220 Identities=9% Similarity=0.071 Sum_probs=112.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC------ceEEEeecCCceEE--EEEecCCCCeEEEE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH------GYVQVWDVSVAKQV--HKLVGHTARVGALA 604 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D------GtI~IWDl~tgk~i--~tl~gHs~~V~sLa 604 (819)
..+..||..+++...+..+...... .+++. -++...++|+.+ ..+..||..+++-. ..+..........+
T Consensus 272 ~~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~ 349 (557)
T PHA02713 272 PCILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAV 349 (557)
T ss_pred CCEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEE
Confidence 3577899988877665555432221 22222 256777777753 34778888776432 22222223344555
Q ss_pred eCCceeeeccCCC-----eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC------------------
Q psy10114 605 WNGDMLSSGSRDR-----MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN------------------ 661 (819)
Q Consensus 605 wng~~LaSGS~DG-----tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG------------------ 661 (819)
.++...+.||.++ ++..||..+.+......+.........+.. +|+..+.||.++
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCccccccccccccccccccc
Confidence 6888888888764 478899887665433332222222222222 677778887653
Q ss_pred -----eEEEEECCCCc--eeEEEecCCCCEEEEEEcCCCCeEEEEEccCC----CCeEEEEECCC-Ccee--EEEcCCCC
Q psy10114 662 -----RLYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA----DRCIRFWNTLT-GQPM--QCVDTGSQ 727 (819)
Q Consensus 662 -----tI~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~----DgtIrIWDl~t-g~~v--~~l~~~s~ 727 (819)
.+..||.++.+ .+..+.........+++ +..+.+.||.+. ...+..||..+ ++-. ..+.....
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~---~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~ 504 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSH---KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLS 504 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCcccccCcEEEE---CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccc
Confidence 47778876543 12211111111111222 234667765211 13467899887 4432 22222222
Q ss_pred eEEEEEccCCCEEEEEEecCCC--eEEEEECCCCcEE
Q psy10114 728 VCNLAWSKHSSELVSTHGYSQN--QILVWKYPTLTQV 762 (819)
Q Consensus 728 V~sLafSpdg~~LastsGssDg--~I~IWDl~s~k~l 762 (819)
..+++. -+..++++ |+.++ .+..||..+.+-.
T Consensus 505 ~~~~~~--~~~~iyv~-Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 505 ALHTIL--HDNTIMML-HCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred cceeEE--ECCEEEEE-eeecceeehhhcCccccccc
Confidence 222222 23345544 44555 6677776655443
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0031 Score=43.64 Aligned_cols=39 Identities=31% Similarity=0.609 Sum_probs=34.5
Q ss_pred CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 759 LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
++....+..|...|.+++|++++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345667778999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.086 Score=58.05 Aligned_cols=140 Identities=14% Similarity=0.176 Sum_probs=90.3
Q ss_pred CCEEEEEEC----------CCeEEEEECCCC----ceeEEE--ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC
Q psy10114 651 NQYLASGGN----------DNRLYVWNLHSM----SPLQTY--TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 651 g~~LaSGS~----------DGtI~IWDl~t~----~~i~t~--~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~ 714 (819)
..++++|+. .|.|.++++... ..+..+ ....++|.+++-- +..++++. ++.|.+|++.
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~~----g~~l~v~~l~ 115 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVAV----GNKLYVYDLD 115 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEEE----TTEEEEEEEE
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEee----cCEEEEEEcc
Confidence 456776653 288999999884 122222 2357889998766 33455543 5899999998
Q ss_pred CCc-eeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEEEe--cCCCCEEEEEEecCCCEEEEEe
Q psy10114 715 TGQ-PMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAKLT--GHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 715 tg~-~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~sl~--gH~~~VtsLafSpDG~~LaSGS 788 (819)
..+ ....-. ....+.++.. .++++++ |+....+.++.+.. ...+..+. .....++++.|-.|++.++.+.
T Consensus 116 ~~~~l~~~~~~~~~~~i~sl~~--~~~~I~v--gD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D 191 (321)
T PF03178_consen 116 NSKTLLKKAFYDSPFYITSLSV--FKNYILV--GDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGD 191 (321)
T ss_dssp TTSSEEEEEEE-BSSSEEEEEE--ETTEEEE--EESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEE
T ss_pred CcccchhhheecceEEEEEEec--cccEEEE--EEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEc
Confidence 887 444333 3445566554 4668887 77777788775543 33233332 2344588888886767999999
Q ss_pred CCCcEEEEECCC
Q psy10114 789 GDETLRFWNVFS 800 (819)
Q Consensus 789 ~DGtIrIWdl~s 800 (819)
.+|.+.++....
T Consensus 192 ~~gnl~~l~~~~ 203 (321)
T PF03178_consen 192 KDGNLFVLRYNP 203 (321)
T ss_dssp TTSEEEEEEE-S
T ss_pred CCCeEEEEEECC
Confidence 999999999864
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.085 Score=63.16 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=124.5
Q ss_pred CCCEEEEEecC------ceEEEeecCCceEE--EEEecCCCCeEEEEeCCceeeeccCC------CeEEEEECCCCCccc
Q psy10114 566 RGNLVAVGTHH------GYVQVWDVSVAKQV--HKLVGHTARVGALAWNGDMLSSGSRD------RMILQRDVRTPNSQS 631 (819)
Q Consensus 566 dG~~LAsGs~D------GtI~IWDl~tgk~i--~tl~gHs~~V~sLawng~~LaSGS~D------GtI~IWDi~t~~~~~ 631 (819)
.+..+++|+.+ ..+..+|..+++-. ..+......+.....++...++||.| .++..||.+.++...
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~ 363 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP 363 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence 34555666655 35778888776433 22333333444445578888999998 357788888877544
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCe-----EEEEECCCCc--eeEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNR-----LYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGt-----I~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
...+............ +|...|+||.||. +-.||.++.+ .+.... ......+...-+..+.++||.+.
T Consensus 364 ~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~---~~r~~~gv~~~~g~iYi~GG~~~ 438 (571)
T KOG4441|consen 364 VAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML---TRRSGHGVAVLGGKLYIIGGGDG 438 (571)
T ss_pred cCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCCCC---cceeeeEEEEECCEEEEEcCcCC
Confidence 3333333322222222 6888899999874 7778876543 111111 12233333333455777776221
Q ss_pred C----CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC-----eEEEEECCCCcEEE--EEecCCCCEE
Q psy10114 705 D----RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN-----QILVWKYPTLTQVA--KLTGHSYRVL 773 (819)
Q Consensus 705 D----gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg-----~I~IWDl~s~k~l~--sl~gH~~~Vt 773 (819)
. .++..||..+++-...-.....=......--+..|+++ |+.|+ +|..||..+.+-.. .+......+.
T Consensus 439 ~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvv-GG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g 517 (571)
T KOG4441|consen 439 SSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVV-GGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVG 517 (571)
T ss_pred CccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEE-CCccCCCccceEEEEcCCCCceeEcccCcccccccc
Confidence 1 46788998887644332221111111111223455555 44443 37778876554432 2222222222
Q ss_pred EEEEecCCCEEEEEeCCC-----cEEEEECCCCcee
Q psy10114 774 YLAMSPDGEAIVTGAGDE-----TLRFWNVFSKVRS 804 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DG-----tIrIWdl~s~~~~ 804 (819)
.... +++..++|+.|| +|..||..+.+..
T Consensus 518 ~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~ 551 (571)
T KOG4441|consen 518 VVVL--GGKLYAVGGFDGNNNLNTVECYDPETDTWT 551 (571)
T ss_pred EEEE--CCEEEEEecccCccccceeEEcCCCCCcee
Confidence 2232 667778888876 4677777666543
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.29 Score=54.24 Aligned_cols=218 Identities=13% Similarity=0.095 Sum_probs=127.2
Q ss_pred EEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-C-CceeeeccCCCeEEEEECCCCCc-cceEEE-
Q psy10114 561 VAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-N-GDMLSSGSRDRMILQRDVRTPNS-QSERRL- 635 (819)
Q Consensus 561 LafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-n-g~~LaSGS~DGtI~IWDi~t~~~-~~v~~l- 635 (819)
..|.+++. ++.+--..+.|.-||..+++.. .+. +.+.+.++.. + +..|+++... +.+++.+.+.. ......
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~~g--~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACEHG--VRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEccc--cEEEeccCCceeEEecccc
Confidence 35666665 4445556677888887755422 222 1222333333 3 3344444332 33455443332 111111
Q ss_pred ec-ccCCeEEEEECCCCCEEEEEEC-----------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 636 VG-HRQEVCGLKWSPDNQYLASGGN-----------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 636 ~g-H~~~VtsLafSpdg~~LaSGS~-----------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
.+ -....+.....|+|.+.++... -|.|+..|. .+..++.+..+-..-+.|+||||++.++++-+
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT-- 182 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADT-- 182 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeC--
Confidence 11 1134567778888886665433 133555554 45666666665666688999999998888754
Q ss_pred CCCeEEEEECCC--Cc---eeEEE---cCCCCeEEEEEccCCCEEEEEEecCC-CeEEEEECCCCcEEEEEecCCCCEEE
Q psy10114 704 ADRCIRFWNTLT--GQ---PMQCV---DTGSQVCNLAWSKHSSELVSTHGYSQ-NQILVWKYPTLTQVAKLTGHSYRVLY 774 (819)
Q Consensus 704 ~DgtIrIWDl~t--g~---~v~~l---~~~s~V~sLafSpdg~~LastsGssD-g~I~IWDl~s~k~l~sl~gH~~~Vts 774 (819)
..+.|.-+++.. +. ....+ ...+..-.++...+|..-++ +..+ +.|..|+.. ++++..+.-....+++
T Consensus 183 ~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~--a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~ 259 (307)
T COG3386 183 PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVA--AVWGGGRVVRFNPD-GKLLGEIKLPVKRPTN 259 (307)
T ss_pred CCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEe--cccCCceEEEECCC-CcEEEEEECCCCCCcc
Confidence 668888887752 21 11111 12345667788888888764 3334 489999977 9999999887788899
Q ss_pred EEEec-CCCEEEEEe
Q psy10114 775 LAMSP-DGEAIVTGA 788 (819)
Q Consensus 775 LafSp-DG~~LaSGS 788 (819)
++|-- +.+.|...+
T Consensus 260 ~~FgG~~~~~L~iTs 274 (307)
T COG3386 260 PAFGGPDLNTLYITS 274 (307)
T ss_pred ceEeCCCcCEEEEEe
Confidence 99853 445554433
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.071 Score=63.79 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=124.1
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC------ceEEEeecCCceE--EEEEecCCCCeEEEE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH------GYVQVWDVSVAKQ--VHKLVGHTARVGALA 604 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D------GtI~IWDl~tgk~--i~tl~gHs~~V~sLa 604 (819)
..+..+|..+++......+.... .-.+++.. +|...++|+.| .++..||..+++- +..+...........
T Consensus 301 ~~ve~yd~~~~~w~~~a~m~~~r-~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~ 378 (571)
T KOG4441|consen 301 RSVECYDPKTNEWSSLAPMPSPR-CRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAV 378 (571)
T ss_pred ceeEEecCCcCcEeecCCCCccc-ccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEE
Confidence 46889999998877766665433 33444444 46788889888 3577888876653 233334444555566
Q ss_pred eCCceeeeccCCC-----eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC------eEEEEECCCCc-
Q psy10114 605 WNGDMLSSGSRDR-----MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN------RLYVWNLHSMS- 672 (819)
Q Consensus 605 wng~~LaSGS~DG-----tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG------tI~IWDl~t~~- 672 (819)
.+|...++||.|| ++-.||.++.+...+..+...........+ +|...++||.|+ ++..||..+++
T Consensus 379 l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~~W 456 (571)
T KOG4441|consen 379 LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETNTW 456 (571)
T ss_pred ECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCCce
Confidence 6899999999996 477888888776544433322222222222 678888888665 46788877654
Q ss_pred -eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC-----eEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec
Q psy10114 673 -PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR-----CIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 673 -~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg-----tIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs 746 (819)
.+..+........ ++. -+..+++.|| .|+ +|..||..+.+-...-..............+..++++ |+
T Consensus 457 ~~~~~M~~~R~~~g-~a~--~~~~iYvvGG--~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~v-GG 530 (571)
T KOG4441|consen 457 TLIAPMNTRRSGFG-VAV--LNGKIYVVGG--FDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAV-GG 530 (571)
T ss_pred eecCCcccccccce-EEE--ECCEEEEECC--ccCCCccceEEEEcCCCCceeEcccCccccccccEEEECCEEEEE-ec
Confidence 2222221111111 221 2345777776 343 4778888877654443333333343334455566665 43
Q ss_pred CCC-----eEEEEECCC
Q psy10114 747 SQN-----QILVWKYPT 758 (819)
Q Consensus 747 sDg-----~I~IWDl~s 758 (819)
.|| +|..||..+
T Consensus 531 ~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 531 FDGNNNLNTVECYDPET 547 (571)
T ss_pred ccCccccceeEEcCCCC
Confidence 443 355555443
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.42 Score=53.51 Aligned_cols=222 Identities=17% Similarity=0.205 Sum_probs=119.1
Q ss_pred EecCCeEEEEECCCeEEEEEcCCCceEEEEeccCC----------------CCCeEEEEEcCCCCEEEEEecC-ceE---
Q psy10114 520 DWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSAD----------------GNSVTSVAWNERGNLVAVGTHH-GYV--- 579 (819)
Q Consensus 520 dwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h----------------~~~VtsLafSpdG~~LAsGs~D-GtI--- 579 (819)
+.+++.++ ...++.|++++..+++..++.. .+. -+.-.++-|||||++||....| ..|
T Consensus 51 sP~g~~~~-~v~~~nly~~~~~~~~~~~lT~-dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~ 128 (353)
T PF00930_consen 51 SPDGKYIA-FVRDNNLYLRDLATGQETQLTT-DGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEY 128 (353)
T ss_dssp -SSSTEEE-EEETTEEEEESSTTSEEEESES---TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EE
T ss_pred ecCCCeeE-EEecCceEEEECCCCCeEEecc-ccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceE
Confidence 33344444 4457899999988886555432 221 1123568899999999986533 222
Q ss_pred --------------------------------EEeecCCceEE--EEE---ecCCCCeEEEEe--CCceeee--ccCC--
Q psy10114 580 --------------------------------QVWDVSVAKQV--HKL---VGHTARVGALAW--NGDMLSS--GSRD-- 616 (819)
Q Consensus 580 --------------------------------~IWDl~tgk~i--~tl---~gHs~~V~sLaw--ng~~LaS--GS~D-- 616 (819)
.|+|+++++.. ... ..-..-+..+.| +++.++. .+++
T Consensus 129 ~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~ 208 (353)
T PF00930_consen 129 PLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQN 208 (353)
T ss_dssp EEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTST
T ss_pred EeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCC
Confidence 22333333221 111 112233556666 3332322 2222
Q ss_pred -CeEEEEECCCCCccceEEEecccCC---eEEEEEC-CCCC-EEEEEECCC--eEEEEECCCCceeEEEecCCCCEEE-E
Q psy10114 617 -RMILQRDVRTPNSQSERRLVGHRQE---VCGLKWS-PDNQ-YLASGGNDN--RLYVWNLHSMSPLQTYTEHLAAVKA-I 687 (819)
Q Consensus 617 -GtI~IWDi~t~~~~~v~~l~gH~~~---VtsLafS-pdg~-~LaSGS~DG--tI~IWDl~t~~~i~t~~~h~~~Vts-L 687 (819)
..+.+.|..++....+.. ...... -....+. +++. ++.....|| .|.+++...+. ...+....-.|.. +
T Consensus 209 ~~~l~~~d~~tg~~~~~~~-e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~ 286 (353)
T PF00930_consen 209 RLDLVLCDASTGETRVVLE-ETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSIL 286 (353)
T ss_dssp EEEEEEEEECTTTCEEEEE-EESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEE
T ss_pred EEEEEEEECCCCceeEEEE-ecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccc
Confidence 245566776655332221 111222 2244554 6555 444455666 46677776665 3456655666744 7
Q ss_pred EEcCCCCeEEEEEcc--CCCCeEEEEECCCCceeEEEcCCCCeE-EEEEccCCCEEEEEEe
Q psy10114 688 AWSPHHHGLLASGGG--TADRCIRFWNTLTGQPMQCVDTGSQVC-NLAWSKHSSELVSTHG 745 (819)
Q Consensus 688 afSPdg~~LLaSGgG--s~DgtIrIWDl~tg~~v~~l~~~s~V~-sLafSpdg~~LastsG 745 (819)
.++++++.++.++.+ .....+..-++.++.....+....... .+.|||+|++++....
T Consensus 287 ~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 287 GWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp EEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence 889999988888763 224567777777344556665554444 9999999999998643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.57 Score=50.61 Aligned_cols=195 Identities=13% Similarity=0.112 Sum_probs=124.2
Q ss_pred ceeecCCCcCCcceEEEEEe-cCCe-EEEEECCC--eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc
Q psy10114 502 FKVLDAPELQDDFYLNLVDW-SSQN-VLSVGLGS--CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG 577 (819)
Q Consensus 502 ~kvLdap~l~dDfyv~~ldw-S~~~-LLa~g~Dg--~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG 577 (819)
++++.........+...+.+ +++. +-+.|.-| .|+.+|..+++..+...+... ----.++.. +++.....-.+|
T Consensus 33 ~~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~-~FgEGit~~-~d~l~qLTWk~~ 110 (264)
T PF05096_consen 33 YEVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPR-YFGEGITIL-GDKLYQLTWKEG 110 (264)
T ss_dssp EEEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT---EEEEEEE-TTEEEEEESSSS
T ss_pred eEEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCcc-ccceeEEEE-CCEEEEEEecCC
Confidence 45555443444556677777 5444 44555544 699999999998877776542 122233333 233444455689
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEeccc---CCeEEEEECCCCCEE
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR---QEVCGLKWSPDNQYL 654 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~---~~VtsLafSpdg~~L 654 (819)
...+||.++.+.+.++.- .+.=+.++.+++.|+.......+..+|..+-+........... ..++.+.|- +|...
T Consensus 111 ~~f~yd~~tl~~~~~~~y-~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~Iy 188 (264)
T PF05096_consen 111 TGFVYDPNTLKKIGTFPY-PGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIY 188 (264)
T ss_dssp EEEEEETTTTEEEEEEE--SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEE
T ss_pred eEEEEccccceEEEEEec-CCcceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEE
Confidence 999999999999988864 3466788889999988888899999998875533222222222 235566765 67666
Q ss_pred EEEECCCeEEEEECCCCceeEEEec---------------CCCCEEEEEEcCCCCeEEEEE
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYTE---------------HLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~~---------------h~~~VtsLafSPdg~~LLaSG 700 (819)
|=.-....|..-|..+|+.+..+.- ...-.+.||+.|..+.++++|
T Consensus 189 ANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 189 ANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 7666777888899999998776631 134588999999999999997
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.069 Score=63.73 Aligned_cols=188 Identities=10% Similarity=0.097 Sum_probs=103.6
Q ss_pred ecCCeEEEEECC------CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc-----eEEEeecCCceE
Q psy10114 521 WSSQNVLSVGLG------SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG-----YVQVWDVSVAKQ 589 (819)
Q Consensus 521 wS~~~LLa~g~D------g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG-----tI~IWDl~tgk~ 589 (819)
.++..++.||.+ +.+..+|..++....+..+.........++ -+|+..+.|+.+| .+..||..+++-
T Consensus 302 l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~--~~g~IYviGG~~~~~~~~sve~Ydp~~~~W 379 (557)
T PHA02713 302 VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAV--IDDTIYAIGGQNGTNVERTIECYTMGDDKW 379 (557)
T ss_pred ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEE--ECCEEEEECCcCCCCCCceEEEEECCCCeE
Confidence 344455666643 347889988887665544432222222222 3577888888764 488899876643
Q ss_pred E--EEEecCCCCeEEEEeCCceeeeccCCC-----------------------eEEEEECCCCCccceEEEecccCCeEE
Q psy10114 590 V--HKLVGHTARVGALAWNGDMLSSGSRDR-----------------------MILQRDVRTPNSQSERRLVGHRQEVCG 644 (819)
Q Consensus 590 i--~tl~gHs~~V~sLawng~~LaSGS~DG-----------------------tI~IWDi~t~~~~~v~~l~gH~~~Vts 644 (819)
. ..+.........++.++...+.||.++ .+..||..+.+...+..+.........
T Consensus 380 ~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~ 459 (557)
T PHA02713 380 KMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGV 459 (557)
T ss_pred EECCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccCcE
Confidence 2 222222223334556888888887653 477788887665433333222112112
Q ss_pred EEECCCCCEEEEEECC------CeEEEEECCC-Cc--eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC--eEEEEEC
Q psy10114 645 LKWSPDNQYLASGGND------NRLYVWNLHS-MS--PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR--CIRFWNT 713 (819)
Q Consensus 645 LafSpdg~~LaSGS~D------GtI~IWDl~t-~~--~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl 713 (819)
+. -+|+..+.||.+ ..+..||.++ .+ .+..+.........+++ +..+.+.|| .|+ .+..||.
T Consensus 460 ~~--~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~---~~~iyv~Gg--~~~~~~~e~yd~ 532 (557)
T PHA02713 460 VS--HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH---DNTIMMLHC--YESYMLQDTFNV 532 (557)
T ss_pred EE--ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE---CCEEEEEee--ecceeehhhcCc
Confidence 22 256777777754 2467899876 32 33333322233333333 345777876 566 6667777
Q ss_pred CCCc
Q psy10114 714 LTGQ 717 (819)
Q Consensus 714 ~tg~ 717 (819)
.+++
T Consensus 533 ~~~~ 536 (557)
T PHA02713 533 YTYE 536 (557)
T ss_pred cccc
Confidence 6654
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=68.72 Aligned_cols=141 Identities=18% Similarity=0.233 Sum_probs=96.5
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE-EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT-YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t-~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
..|.--+++..+++++.|+.-|.+++|+...++.... ..+..+.+.....+++.. +++.|+ ..|.|.++.+..+.+
T Consensus 34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~-lvAagt--~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEY-LVAAGT--ASGRVSVFQLNKELP 110 (726)
T ss_pred ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhH-hhhhhc--CCceEEeehhhccCC
Confidence 3444445667789999999999999999776654332 223445556667777665 555544 889999998876443
Q ss_pred eE-----EE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC----cEEEEEecCCCCEEEEEEecCCCEEEE
Q psy10114 719 MQ-----CV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL----TQVAKLTGHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 719 v~-----~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~----k~l~sl~gH~~~VtsLafSpDG~~LaS 786 (819)
-. .. .++..|++++|++++..+++ |+..|+|..-.+.+. .....+..-++.|..+... ++..|++
T Consensus 111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ys--GD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~~LLVS 186 (726)
T KOG3621|consen 111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYS--GDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QSYLLVS 186 (726)
T ss_pred CcceeeccccccCCceEEEEEecccccEEee--cCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cceehHh
Confidence 21 11 24678999999999999999 999999999888762 1223344456677777764 3334443
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.52 E-value=1.7 Score=47.50 Aligned_cols=269 Identities=14% Similarity=0.053 Sum_probs=146.9
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---eEEEEEec
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---KQVHKLVG 595 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---k~i~tl~g 595 (819)
+..+++++..+..+..++|.|..+.+...+..+-.-.+--.++.. .|++..++..|.-+-+.|+.+. ........
T Consensus 92 v~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~lagrya~ 169 (370)
T COG5276 92 VRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQLAGRYAL 169 (370)
T ss_pred eEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCceeeeeecc
Confidence 456778888888888899999987654333222212234444554 4889999885555667888654 33444445
Q ss_pred CCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 596 HTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 596 Hs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
....-..++.+|++-..+..|+-+.+-|+..+.......-......+.++..+++..+++... --+.+-|..+.+...
T Consensus 170 ~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~~ssp~ 247 (370)
T COG5276 170 PGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSGPSSPT 247 (370)
T ss_pred CCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceEEEecCCCCCce
Confidence 555567888899999999999999999999876533222222233677777776665555543 346777776665444
Q ss_pred EEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc---eeEEEcCCC-CeEEEEEccCCCEEEEEEecCCC
Q psy10114 676 TYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ---PMQCVDTGS-QVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 676 t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~---~v~~l~~~s-~V~sLafSpdg~~LastsGssDg 749 (819)
.+. +...++..-.+.-.+++..+.- .+.-+.+-|..+.. ....+.+.. +-..+.. .+.++.. ... +
T Consensus 248 ~~gsyet~~p~~~s~v~Vs~~~~Yvad---ga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a--y~~y~yi--adk-n 319 (370)
T COG5276 248 VFGSYETSNPVSISTVPVSGEYAYVAD---GAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYI--ADK-N 319 (370)
T ss_pred EeeccccCCcccccceecccceeeeec---cccCceeEeccCCCCCchhccccCCCccccceEE--ecCeeEe--ccC-C
Confidence 332 2222221112222233333332 23444445544321 111222222 2223322 2233333 111 1
Q ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
...+-+....+......+-...+.+.+.+-+.+.+.+...++.+.+|+..
T Consensus 320 ~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~~ 369 (370)
T COG5276 320 TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEYL 369 (370)
T ss_pred ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEec
Confidence 33333433222222222222334445555566788888899999999863
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.079 Score=63.61 Aligned_cols=150 Identities=12% Similarity=0.094 Sum_probs=92.5
Q ss_pred CCeEEEEECCCCCEEEEEE------CCC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc---------
Q psy10114 640 QEVCGLKWSPDNQYLASGG------NDN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG--------- 702 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS------~DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG--------- 702 (819)
..+...+.+|||+.+|... .|+ .|.+.+. .+.. ..+... .....-.|+|+|..+.+...+
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~g-~~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLEG-HSLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeecC-CCCCCceECCCCCceEEEecCcceEEEecc
Confidence 4678889999999887765 243 5666665 2222 333222 237888999998877665321
Q ss_pred CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEE---EECCCCcE-E---EEEec-CCCCEEE
Q psy10114 703 TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILV---WKYPTLTQ-V---AKLTG-HSYRVLY 774 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~I---WDl~s~k~-l---~sl~g-H~~~Vts 774 (819)
...+.+.+.++..++... ..+..|..+.|||||..++.+. +++|.+ -....+.. + ..+.. -...+.+
T Consensus 427 ~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~---~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~ 501 (591)
T PRK13616 427 PATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII---GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVS 501 (591)
T ss_pred CCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE---CCEEEEEEEEeCCCCceeecccEEeecccCCcccc
Confidence 122344444555544433 3456799999999999999875 467777 44444541 1 11222 2334688
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 775 LAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 775 LafSpDG~~LaSGS~DGtIrIWdl 798 (819)
++|..++.++ ++..++.-.+|.+
T Consensus 502 l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 502 LDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred ceEecCCEEE-EEecCCCCceEEE
Confidence 9999998854 5555555555554
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=3.4 Score=50.84 Aligned_cols=239 Identities=10% Similarity=0.083 Sum_probs=120.8
Q ss_pred CeEEEEEcCCCCEEEEEec-----CceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC------CCeEEEEE
Q psy10114 557 SVTSVAWNERGNLVAVGTH-----HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR------DRMILQRD 623 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~-----DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~------DGtI~IWD 623 (819)
.+..+.|+|||++|+.+.. ...+++-|+.+|+.+...-.... ..++| +++.|+.+.. ...|..++
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 4667889999999887643 24688889988764322211111 45888 5554444332 24678888
Q ss_pred CCCCCccceEEEecccCCeE-EEEECCCCCEEEEEEC---CCeEEEEECC--CCceeEEEecCCCCEEEEEEcCCCCeEE
Q psy10114 624 VRTPNSQSERRLVGHRQEVC-GLKWSPDNQYLASGGN---DNRLYVWNLH--SMSPLQTYTEHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~Vt-sLafSpdg~~LaSGS~---DGtI~IWDl~--t~~~i~t~~~h~~~VtsLafSPdg~~LL 697 (819)
+.++.......+........ ....+.|+++++..+. ++.+.+++.. +++....+.........+. +..+..++
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ly~ 284 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRFYL 284 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEEEE
Confidence 88774322233333222232 3334558887665443 3568888853 3333222222222223332 33333334
Q ss_pred EEEccCCCCeEEEEECCC-CceeEEEcC--CCCeEEEEEccCCCEEEEEEecCCCeEEE--EECCCCcEEEEEe-cCCCC
Q psy10114 698 ASGGGTADRCIRFWNTLT-GQPMQCVDT--GSQVCNLAWSKHSSELVSTHGYSQNQILV--WKYPTLTQVAKLT-GHSYR 771 (819)
Q Consensus 698 aSGgGs~DgtIrIWDl~t-g~~v~~l~~--~s~V~sLafSpdg~~LastsGssDg~I~I--WDl~s~k~l~sl~-gH~~~ 771 (819)
.+..+.....|...++.+ ++....+.. +..+..+.+. ++.++.. ...++.-++ ++.. +..+..+. .....
T Consensus 285 ~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~-~~~~g~~~l~~~~~~-~~~~~~l~~~~~~~ 360 (686)
T PRK10115 285 RSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLVVE-ERQRGLTSLRQINRK-TREVIGIAFDDPAY 360 (686)
T ss_pred EEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEEEE-EEeCCEEEEEEEcCC-CCceEEecCCCCce
Confidence 433222334455555552 322223333 2357777776 4455553 445555444 4443 23344443 22223
Q ss_pred EEEEEEe--cCCC-EEEEEeC---CCcEEEEECCCCc
Q psy10114 772 VLYLAMS--PDGE-AIVTGAG---DETLRFWNVFSKV 802 (819)
Q Consensus 772 VtsLafS--pDG~-~LaSGS~---DGtIrIWdl~s~~ 802 (819)
+..+.++ +++. .+++.++ -+.+..+|..+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 361 VTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred EeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 3334444 3433 4444333 4678888887764
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.16 Score=47.85 Aligned_cols=101 Identities=21% Similarity=0.248 Sum_probs=68.4
Q ss_pred eEEEEECC---CC-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 642 VCGLKWSP---DN-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 642 VtsLafSp---dg-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
|++|++.. || +.|++|++|..|++|+-. +.+..+.. .+.|.+++-...++...+. .+|+|-+|+- .+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l----~NGTVGvY~~--~~ 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGGGRFAYAL----ANGTVGVYDR--SQ 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCCCEEEEEe----cCCEEEEEeC--cc
Confidence 45555543 33 579999999999999843 56667664 5667788777765533332 7899999975 44
Q ss_pred eeEEEcCCCCeEEEEEccCC----CEEEEEEecCCCeEEE
Q psy10114 718 PMQCVDTGSQVCNLAWSKHS----SELVSTHGYSQNQILV 753 (819)
Q Consensus 718 ~v~~l~~~s~V~sLafSpdg----~~LastsGssDg~I~I 753 (819)
.+..++...++.++++..-. ..|++ |-++|.|-+
T Consensus 73 RlWRiKSK~~~~~~~~~D~~gdG~~eLI~--GwsnGkve~ 110 (111)
T PF14783_consen 73 RLWRIKSKNQVTSMAFYDINGDGVPELIV--GWSNGKVEV 110 (111)
T ss_pred eeeeeccCCCeEEEEEEcCCCCCceEEEE--EecCCeEEe
Confidence 55566667777777665433 26776 778887753
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0076 Score=71.93 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=91.6
Q ss_pred EEEEEcCCCCeEEEEE-ccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE
Q psy10114 685 KAIAWSPHHHGLLASG-GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA 763 (819)
Q Consensus 685 tsLafSPdg~~LLaSG-gGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~ 763 (819)
+-..|+|....+.++. +....|.|.|| ..+|++...+.-.-.+++++|+|..-.++. |..-|.+.+|...+.+.-.
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~Vt~P~hatSLCWHpe~~vLa~--gwe~g~~~v~~~~~~e~ht 95 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDVTYPVHATSLCWHPEEFVLAQ--GWEMGVSDVQKTNTTETHT 95 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCcccccceehhhhccChHHHHHhh--ccccceeEEEecCCceeee
Confidence 4457889888654432 22356788887 467887776666667788999999877777 8899999999988777666
Q ss_pred EEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 764 KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 764 sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
....|..+|..+.||++|..++|+..-|.|.+|...-.
T Consensus 96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~ 133 (1416)
T KOG3617|consen 96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVI 133 (1416)
T ss_pred eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeec
Confidence 66789999999999999999999999999999998743
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.88 Score=48.21 Aligned_cols=205 Identities=14% Similarity=0.193 Sum_probs=119.4
Q ss_pred CCEEEEEecCceEEEeecCCceEEE-EEecCCCCeEEEEe--CC--c-eeeeccCCCeEEEEECCCCCccceEEEe----
Q psy10114 567 GNLVAVGTHHGYVQVWDVSVAKQVH-KLVGHTARVGALAW--NG--D-MLSSGSRDRMILQRDVRTPNSQSERRLV---- 636 (819)
Q Consensus 567 G~~LAsGs~DGtI~IWDl~tgk~i~-tl~gHs~~V~sLaw--ng--~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~---- 636 (819)
+.++.+--..|.|.-||.++.+..+ ++.+.. +.++.+ .+ + +.+.++..-.|.-||..........++.
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~--~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~ 104 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIEGPP--SAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQP 104 (310)
T ss_pred ceEEEEEeccCceehhhhhhhheEEEEEecCc--ceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCc
Confidence 4455555566777778887755433 233322 333333 22 2 3333333344555774433222222211
Q ss_pred -cccCCeEEEEECCCCCEEEEEECC---------CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 637 -GHRQEVCGLKWSPDNQYLASGGND---------NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 637 -gH~~~VtsLafSpdg~~LaSGS~D---------GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
........-..+|+|++++-.-.| |.++.|-.. ..+..+...-+--+.++|+.+.+.+....+ .+-
T Consensus 105 d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~--h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDs--ln~ 180 (310)
T KOG4499|consen 105 DRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG--HQVELIWNCVGISNGLAWDSDAKKFYYIDS--LNY 180 (310)
T ss_pred hHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccC--CCceeeehhccCCccccccccCcEEEEEcc--Cce
Confidence 113345666788999984432222 334444321 122223333344467899999998888764 788
Q ss_pred eEEEEE--CCCCce-----eEEEcC----CC-CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEE
Q psy10114 707 CIRFWN--TLTGQP-----MQCVDT----GS-QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLY 774 (819)
Q Consensus 707 tIrIWD--l~tg~~-----v~~l~~----~s-~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vts 774 (819)
+|.-|| ..+|.. +..+.. ++ ....++...+|+..++ ..+.++|...|..+|+.+.++.-....|++
T Consensus 181 ~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va--~~ng~~V~~~dp~tGK~L~eiklPt~qits 258 (310)
T KOG4499|consen 181 EVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVA--TFNGGTVQKVDPTTGKILLEIKLPTPQITS 258 (310)
T ss_pred EEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEE--EecCcEEEEECCCCCcEEEEEEcCCCceEE
Confidence 887787 666643 222221 11 1344566677777777 567899999999999999999988999999
Q ss_pred EEEec
Q psy10114 775 LAMSP 779 (819)
Q Consensus 775 LafSp 779 (819)
++|--
T Consensus 259 ccFgG 263 (310)
T KOG4499|consen 259 CCFGG 263 (310)
T ss_pred EEecC
Confidence 99954
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.16 E-value=2.9 Score=46.33 Aligned_cols=224 Identities=15% Similarity=0.201 Sum_probs=110.3
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCc-eEEEEecc-CCCCCeEEEEEcCCCCEEEEEecCceEEEeecC-CceE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQ-VTRLCDLS-ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS-VAKQ 589 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~-~~~l~~l~-~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~-tgk~ 589 (819)
++.++.+++.++...++|..+.|. ...+.|+ ..++. +. .-.+....+....++...+ ++..|.| |... .|+.
T Consensus 61 ~~~l~~I~f~~~~g~ivG~~g~ll-~T~DgG~tW~~v~-l~~~lpgs~~~i~~l~~~~~~l-~~~~G~i--y~T~DgG~t 135 (302)
T PF14870_consen 61 DYHLNSISFDGNEGWIVGEPGLLL-HTTDGGKTWERVP-LSSKLPGSPFGITALGDGSAEL-AGDRGAI--YRTTDGGKT 135 (302)
T ss_dssp --EEEEEEEETTEEEEEEETTEEE-EESSTTSS-EE-----TT-SS-EEEEEEEETTEEEE-EETT--E--EEESSTTSS
T ss_pred eeeEEEEEecCCceEEEcCCceEE-EecCCCCCcEEee-cCCCCCCCeeEEEEcCCCcEEE-EcCCCcE--EEeCCCCCC
Confidence 567888888887777777766543 3333333 33321 21 1123334444444443333 3445544 3333 3332
Q ss_pred EE-EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 590 VH-KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 590 i~-tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
-+ ....-.+.+..+.- +|.++++++......-||.-..... ..-..-...|..|.|++++...+. ...|.|+.=
T Consensus 136 W~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~--~~~r~~~~riq~~gf~~~~~lw~~-~~Gg~~~~s 212 (302)
T PF14870_consen 136 WQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQ--PHNRNSSRRIQSMGFSPDGNLWML-ARGGQIQFS 212 (302)
T ss_dssp EEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-E--EEE--SSS-EEEEEE-TTS-EEEE-ETTTEEEEE
T ss_pred eeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccce--EEccCccceehhceecCCCCEEEE-eCCcEEEEc
Confidence 22 23344566777666 5677777777666677776543322 223334678999999999876554 488888887
Q ss_pred ECCCCceeEEEe-------cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc----CCCCeEEEEEcc
Q psy10114 667 NLHSMSPLQTYT-------EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD----TGSQVCNLAWSK 735 (819)
Q Consensus 667 Dl~t~~~i~t~~-------~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~----~~s~V~sLafSp 735 (819)
|... ...++. ...-.+..++|.+++. +.++|+ .|.+ +.....|+.-+... ..+....+.|..
T Consensus 213 ~~~~--~~~~w~~~~~~~~~~~~~~ld~a~~~~~~-~wa~gg---~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~ 285 (302)
T PF14870_consen 213 DDPD--DGETWSEPIIPIKTNGYGILDLAYRPPNE-IWAVGG---SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVN 285 (302)
T ss_dssp E-TT--EEEEE---B-TTSS--S-EEEEEESSSS--EEEEES---TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEE
T ss_pred cCCC--CccccccccCCcccCceeeEEEEecCCCC-EEEEeC---CccE-EEeCCCCccceECccccCCCCceEEEEEcC
Confidence 7211 112222 1233478999999876 555554 4544 44556666555543 245688899987
Q ss_pred CCCEEEEEEecCCCeEEEE
Q psy10114 736 HSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 736 dg~~LastsGssDg~I~IW 754 (819)
+.+-++. | .+|.+.-|
T Consensus 286 ~~~gf~l--G-~~G~ll~~ 301 (302)
T PF14870_consen 286 PDKGFVL--G-QDGVLLRY 301 (302)
T ss_dssp TTEEEEE----STTEEEEE
T ss_pred CCceEEE--C-CCcEEEEe
Confidence 7777776 4 67776554
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.51 Score=56.79 Aligned_cols=178 Identities=13% Similarity=0.119 Sum_probs=96.6
Q ss_pred CCCeEEEEEcCCCCEEEEEe------cCc--eEEEeecCCceEEEEE-ecCCCCeEEEEeC--CceeeeccC--------
Q psy10114 555 GNSVTSVAWNERGNLVAVGT------HHG--YVQVWDVSVAKQVHKL-VGHTARVGALAWN--GDMLSSGSR-------- 615 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs------~DG--tI~IWDl~tgk~i~tl-~gHs~~V~sLawn--g~~LaSGS~-------- 615 (819)
...+.+.+.+|+|+.+|... .|+ .+.+++.. +.. +.+ .+. ..+.-.|+ |+.+++.+.
T Consensus 349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~ 424 (591)
T PRK13616 349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVI 424 (591)
T ss_pred ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeecCC--CCCCceECCCCCceEEEecCcceEEEe
Confidence 35688999999999887765 244 44444542 222 333 222 36667773 454444432
Q ss_pred ----CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEE---EECCCCce-e---EEEec-CCCC
Q psy10114 616 ----DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV---WNLHSMSP-L---QTYTE-HLAA 683 (819)
Q Consensus 616 ----DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~I---WDl~t~~~-i---~t~~~-h~~~ 683 (819)
.+.+.+.+++.++.. . ...+.|..+.|||||..+|... +|+|.+ -....|.. + ..+.. -...
T Consensus 425 ~~~~~gql~~~~vd~ge~~--~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~ 498 (591)
T PRK13616 425 RDPATGQLARTPVDASAVA--S---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDT 498 (591)
T ss_pred ccCCCceEEEEeccCchhh--h---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCc
Confidence 234444455443321 1 2345799999999999988876 478877 44444541 1 11222 2334
Q ss_pred EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 684 VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 684 VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGssDg 749 (819)
+.++.|.+++..++.+. ..+..+...++..... ..+.. ..++..++-++ ..+++ ...++
T Consensus 499 ~~~l~W~~~~~L~V~~~--~~~~~v~~v~vDG~~~-~~~~~~n~~~~v~~vaa~~--~~iyv--~~~~g 560 (591)
T PRK13616 499 AVSLDWRTGDSLVVGRS--DPEHPVWYVNLDGSNS-DALPSRNLSAPVVAVAASP--STVYV--TDARA 560 (591)
T ss_pred cccceEecCCEEEEEec--CCCCceEEEecCCccc-cccCCCCccCceEEEecCC--ceEEE--EcCCc
Confidence 68899999998443322 2344455555543222 22122 34566666554 24444 33444
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.02 Score=67.00 Aligned_cols=81 Identities=16% Similarity=0.246 Sum_probs=71.5
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 724 TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL-YLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 724 ~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vt-sLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
....+..+.|+|.-..+|. +..+|.+.+..+. .+.+.++.-|...++ +++|.|||+.||.|-.||+|++-|++++.
T Consensus 19 l~~~i~~~ewnP~~dLiA~--~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIAT--RTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cccceEEEEEcCccchhhe--eccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 3456788999999999998 7789999999987 888889887777777 99999999999999999999999999988
Q ss_pred eeccc
Q psy10114 803 RSQRE 807 (819)
Q Consensus 803 ~~~k~ 807 (819)
.....
T Consensus 96 ~l~~~ 100 (665)
T KOG4640|consen 96 RLVSF 100 (665)
T ss_pred ceecc
Confidence 77664
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.016 Score=39.90 Aligned_cols=36 Identities=36% Similarity=0.749 Sum_probs=32.2
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
...+..|...|.++.|+++++.+++++.|+.+++||
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 455667888999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.9 Score=51.66 Aligned_cols=159 Identities=15% Similarity=0.145 Sum_probs=96.2
Q ss_pred eEEEEECCCCCEEEEE-ECCC----eEEEEECCCCceeEEE-ecCCCCEEEEEEcCCCCeEEEEEccCC--------CCe
Q psy10114 642 VCGLKWSPDNQYLASG-GNDN----RLYVWNLHSMSPLQTY-TEHLAAVKAIAWSPHHHGLLASGGGTA--------DRC 707 (819)
Q Consensus 642 VtsLafSpdg~~LaSG-S~DG----tI~IWDl~t~~~i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~--------Dgt 707 (819)
+...++||||+++|.+ +..| .+++.|+++++.+... ... ....+.|.++++.++.+.-+.. ...
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 3467789999998865 3334 5999999999765432 221 1134999999999888864221 456
Q ss_pred EEEEECCCCcee--EEEc--CCCC-eEEEEEccCCCEEEEEEecC-C-CeEEEEECCCC----cEEEEEecCCCCEEEEE
Q psy10114 708 IRFWNTLTGQPM--QCVD--TGSQ-VCNLAWSKHSSELVSTHGYS-Q-NQILVWKYPTL----TQVAKLTGHSYRVLYLA 776 (819)
Q Consensus 708 IrIWDl~tg~~v--~~l~--~~s~-V~sLafSpdg~~LastsGss-D-g~I~IWDl~s~----k~l~sl~gH~~~VtsLa 776 (819)
|+.|.+.++..- ..+. .... ...+..++|++++++..... + ..+.+.|...+ .....+......+....
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v 283 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV 283 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence 889998876533 2332 2233 67899999999988755433 3 57888898874 33344443444443333
Q ss_pred EecCCCEEEEE---eCCCcEEEEECCCCc
Q psy10114 777 MSPDGEAIVTG---AGDETLRFWNVFSKV 802 (819)
Q Consensus 777 fSpDG~~LaSG---S~DGtIrIWdl~s~~ 802 (819)
-+.++.+++.. +.++.|.--++....
T Consensus 284 ~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~ 312 (414)
T PF02897_consen 284 DHHGDRLYILTNDDAPNGRLVAVDLADPS 312 (414)
T ss_dssp EEETTEEEEEE-TT-TT-EEEEEETTSTS
T ss_pred EccCCEEEEeeCCCCCCcEEEEecccccc
Confidence 33344444433 234567777777655
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.029 Score=65.72 Aligned_cols=93 Identities=20% Similarity=0.412 Sum_probs=77.0
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEE-EEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK-AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 639 ~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~Vt-sLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
...+.-+.|+|.-..+|.+..+|.|.+..+. .+.+.++.-+...++ +++|.|||+ +++.| -.||+|++.|..+|.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGk-llaVg--~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGK-LLAVG--FKDGTIRLHDVEKGG 95 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCC-EEEEE--ecCCeEEEEEccCCC
Confidence 4567889999999999999999999999887 777888886777777 999999998 45554 389999999999998
Q ss_pred eeEE--EcCCCCeEEEEEcc
Q psy10114 718 PMQC--VDTGSQVCNLAWSK 735 (819)
Q Consensus 718 ~v~~--l~~~s~V~sLafSp 735 (819)
.+.. +.....|.++-|++
T Consensus 96 ~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 96 RLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred ceeccccccccchheeeccc
Confidence 8877 44566788888863
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.077 Score=61.23 Aligned_cols=143 Identities=13% Similarity=0.153 Sum_probs=98.9
Q ss_pred CCCEEE-EEecCceEEEeecCCceEEEEEecCCCCeEEEEeC---------CceeeeccCCCeEEEEECCCCCccceEEE
Q psy10114 566 RGNLVA-VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---------GDMLSSGSRDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 566 dG~~LA-sGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---------g~~LaSGS~DGtI~IWDi~t~~~~~v~~l 635 (819)
+.++|. .|.....++-.|++.|+.+...+-+.. |.-+.+. ...-+.|-.|..|.-||.+-.....+...
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~ 422 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV 422 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence 444444 455556688889999999999987776 4444442 22334566788899999986543222233
Q ss_pred eccc----CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 636 VGHR----QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 636 ~gH~----~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
++|. ....|.+-..+ .++|+||.+|.|++||.-..+...-+.+-..+|+.|..+.+|+++++++ +..+.+.
T Consensus 423 q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc----~tyLlLi 497 (644)
T KOG2395|consen 423 QSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC----KTYLLLI 497 (644)
T ss_pred eccccccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec----ccEEEEE
Confidence 3332 23445554444 4899999999999999744344455677789999999999999999985 6778877
Q ss_pred ECC
Q psy10114 712 NTL 714 (819)
Q Consensus 712 Dl~ 714 (819)
++.
T Consensus 498 ~t~ 500 (644)
T KOG2395|consen 498 DTL 500 (644)
T ss_pred EEe
Confidence 764
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.91 E-value=3.8 Score=45.69 Aligned_cols=230 Identities=18% Similarity=0.217 Sum_probs=118.0
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceE---EEEEe----cCCCCeEEEEeCC-----ceeeeccC-------C-
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ---VHKLV----GHTARVGALAWNG-----DMLSSGSR-------D- 616 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~---i~tl~----gHs~~V~sLawng-----~~LaSGS~-------D- 616 (819)
..++|+|.|||+++++ ...|.|.+++ ..+.. +..+. ........+++++ ..|..... +
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 4578999999977654 6699999999 44443 33331 2345678889865 33332222 1
Q ss_pred -CeEEEEECCCCC--c---c-ceEEEec---ccCCeEEEEECCCCCEEEEEECCC-------------eEEEEECCCCc-
Q psy10114 617 -RMILQRDVRTPN--S---Q-SERRLVG---HRQEVCGLKWSPDNQYLASGGNDN-------------RLYVWNLHSMS- 672 (819)
Q Consensus 617 -GtI~IWDi~t~~--~---~-~v~~l~g---H~~~VtsLafSpdg~~LaSGS~DG-------------tI~IWDl~t~~- 672 (819)
..|.-|...... . . .+..... ....-..|.|.|||.+.++.+..+ .|.-.+....-
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p 160 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIP 160 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcCC
Confidence 234444443331 0 1 1111121 233456799999997766665433 23323322110
Q ss_pred -----------eeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCC--eEEEEECCCC----------------------
Q psy10114 673 -----------PLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADR--CIRFWNTLTG---------------------- 716 (819)
Q Consensus 673 -----------~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl~tg---------------------- 716 (819)
....+. ++ .....++|+|....++++-.| .|. .|.+. ..|
T Consensus 161 ~dnP~~~~~~~~~~i~A~Gl-RN~~~~~~d~~tg~l~~~d~G-~~~~dein~i--~~G~nYGWP~~~~~~~~~~~~~~~~ 236 (331)
T PF07995_consen 161 ADNPFVGDDGADSEIYAYGL-RNPFGLAFDPNTGRLWAADNG-PDGWDEINRI--EPGGNYGWPYCEGGPKYSGPPIGDA 236 (331)
T ss_dssp TTSTTTTSTTSTTTEEEE---SEEEEEEEETTTTEEEEEEE--SSSSEEEEEE---TT-B--TTTBSSSCSTTSS-ECTG
T ss_pred CCCccccCCCceEEEEEeCC-CccccEEEECCCCcEEEEccC-CCCCcEEEEe--ccCCcCCCCCCcCCCCCCCCccccc
Confidence 001111 12 224578999983335554322 222 23222 111
Q ss_pred -------ceeEEEcCCCCeEEEEEccC-------CCEEEEEEecCCCeEEEEECCCCcEEEEE---e-cCCCCEEEEEEe
Q psy10114 717 -------QPMQCVDTGSQVCNLAWSKH-------SSELVSTHGYSQNQILVWKYPTLTQVAKL---T-GHSYRVLYLAMS 778 (819)
Q Consensus 717 -------~~v~~l~~~s~V~sLafSpd-------g~~LastsGssDg~I~IWDl~s~k~l~sl---~-gH~~~VtsLafS 778 (819)
.++..+.....+..+.|... |..+++ ....+.|...++.....+... . ....++..+++.
T Consensus 237 ~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~ 314 (331)
T PF07995_consen 237 PSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVA--DYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG 314 (331)
T ss_dssp SS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEE--ETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE
T ss_pred cCCCCcCccceeecCccccCceEEECCccCccccCcEEEe--cCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc
Confidence 12233444556777777643 345555 555678888887655433222 2 344589999999
Q ss_pred cCCCEEEEEeCCCcEE
Q psy10114 779 PDGEAIVTGAGDETLR 794 (819)
Q Consensus 779 pDG~~LaSGS~DGtIr 794 (819)
|||.+.++.+.+|.|.
T Consensus 315 pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 315 PDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTSEEEEEE-TTTTEE
T ss_pred CCCeEEEEECCCCeEe
Confidence 9999988888888874
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.87 E-value=1.9 Score=47.90 Aligned_cols=209 Identities=16% Similarity=0.121 Sum_probs=116.9
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecC-----CCCe
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGH-----TARV 600 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gH-----s~~V 600 (819)
+.+--.++.|.-|+..+++... ... .+.+.++..-.++..|+++.. | +.+++.+++..+..+..- ..+-
T Consensus 40 ~w~DI~~~~i~r~~~~~g~~~~-~~~---p~~~~~~~~~d~~g~Lv~~~~-g-~~~~~~~~~~~~t~~~~~~~~~~~~r~ 113 (307)
T COG3386 40 LWVDILGGRIHRLDPETGKKRV-FPS---PGGFSSGALIDAGGRLIACEH-G-VRLLDPDTGGKITLLAEPEDGLPLNRP 113 (307)
T ss_pred EEEeCCCCeEEEecCCcCceEE-EEC---CCCcccceeecCCCeEEEEcc-c-cEEEeccCCceeEEeccccCCCCcCCC
Confidence 3344456778888888776533 222 234455555444445544432 3 566776666553333211 1222
Q ss_pred EEEEe--CCceeeeccC-----------CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-CCeEEEE
Q psy10114 601 GALAW--NGDMLSSGSR-----------DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-DNRLYVW 666 (819)
Q Consensus 601 ~sLaw--ng~~LaSGS~-----------DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DGtI~IW 666 (819)
+.... +|.+.++... -|.++..|.. + ..+.....+-..-++++||||++.+..+.. .+.|.-+
T Consensus 114 ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~-g--~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 114 NDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPD-G--GVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCC-C--CEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 33333 3333322222 1334444432 1 223444444555678999999988777655 4788888
Q ss_pred ECCC--Cc-----eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-CCeEEEEEc-cCC
Q psy10114 667 NLHS--MS-----PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-SQVCNLAWS-KHS 737 (819)
Q Consensus 667 Dl~t--~~-----~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-s~V~sLafS-pdg 737 (819)
+... +. ....+....+..-.++...+|...++... ..+.|..|+.. |+.+..+... ..+++++|- ++.
T Consensus 191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~--~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~ 267 (307)
T COG3386 191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVW--GGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDL 267 (307)
T ss_pred ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEeccc--CCceEEEECCC-CcEEEEEECCCCCCccceEeCCCc
Confidence 7752 11 12222334566677788888875543321 22489999988 8988888766 677888774 456
Q ss_pred CEEEEEEec
Q psy10114 738 SELVSTHGY 746 (819)
Q Consensus 738 ~~LastsGs 746 (819)
+.|++++..
T Consensus 268 ~~L~iTs~~ 276 (307)
T COG3386 268 NTLYITSAR 276 (307)
T ss_pred CEEEEEecC
Confidence 777776543
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.11 Score=64.06 Aligned_cols=96 Identities=24% Similarity=0.290 Sum_probs=72.7
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
+..++.|+..|.|-..|..+. ......-..-.++|++++|+.+|..++.|-.+|.|.+||+..++.++.+..|..++.+
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 345777777788888776543 2211122233689999999999999999999999999999999999999888777766
Q ss_pred EEe----C-CceeeeccCCCeE
Q psy10114 603 LAW----N-GDMLSSGSRDRMI 619 (819)
Q Consensus 603 Law----n-g~~LaSGS~DGtI 619 (819)
+-+ + +..+.++...|.+
T Consensus 178 vi~v~~t~~nS~llt~D~~Gsf 199 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGSF 199 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCce
Confidence 655 3 3468888888864
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.56 Score=55.37 Aligned_cols=192 Identities=13% Similarity=0.110 Sum_probs=98.0
Q ss_pred EEecCCeEEEEECC------CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-----ceEEEeecCCc
Q psy10114 519 VDWSSQNVLSVGLG------SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVA 587 (819)
Q Consensus 519 ldwS~~~LLa~g~D------g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tg 587 (819)
+..++..++.||.+ ..+..+|..+.+...+..+.........+.. ++...+.|+.+ ..+..||..++
T Consensus 291 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~ 368 (534)
T PHA03098 291 VVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGES 368 (534)
T ss_pred EEECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCC
Confidence 33444455666543 2578899988887665444322222333333 57777888765 35778888765
Q ss_pred eEEE--EEecCCCCeEEEEeCCceeeeccCC------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC
Q psy10114 588 KQVH--KLVGHTARVGALAWNGDMLSSGSRD------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 588 k~i~--tl~gHs~~V~sLawng~~LaSGS~D------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
+-.. .+............++...+.||.+ +.+..||..+.+......+.........+. .++..++.||.
T Consensus 369 ~W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~ 446 (534)
T PHA03098 369 KWREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIY--HDGKIYVIGGI 446 (534)
T ss_pred ceeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEE--ECCEEEEECCc
Confidence 4322 1211112222344577777777732 457889988765433222221111112222 25666677764
Q ss_pred C--------CeEEEEECCCCce--eEEEecCCCCEEEEEEcCCCCeEEEEEccCC---CCeEEEEECCCCc
Q psy10114 660 D--------NRLYVWNLHSMSP--LQTYTEHLAAVKAIAWSPHHHGLLASGGGTA---DRCIRFWNTLTGQ 717 (819)
Q Consensus 660 D--------GtI~IWDl~t~~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~---DgtIrIWDl~tg~ 717 (819)
+ +.+.+||..+++= +............+.+ +..+++.||... .+.+.+||..+++
T Consensus 447 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 447 SYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF---NNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred cCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE---CCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 3 2388889876542 1111111111122222 344666665211 2467777776654
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=95.70 E-value=8.5 Score=48.07 Aligned_cols=283 Identities=11% Similarity=0.091 Sum_probs=150.4
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC------CEEEEEecCceEEEeec-CC
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG------NLVAVGTHHGYVQVWDV-SV 586 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG------~~LAsGs~DGtI~IWDl-~t 586 (819)
..+..+.-+...++.++.++.+...+...+.+..... ..-+..|.|+.++|-| +.+|+|..+..+.+--. .+
T Consensus 490 ~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~-~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd 568 (1096)
T KOG1897|consen 490 ITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSH-KEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPD 568 (1096)
T ss_pred eEEEEEeecceEEEEecCccEEEEEEeeccceeeeee-heecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCC
Confidence 3455555555677777777777777777665433221 2235789999999743 38899988776655433 22
Q ss_pred ceEEEEE--ec--CCCCeEEEEe--CCceeeeccCCCeEEEEECCC--CCccceEEEecccCCeEEEEECCCCCEEEEEE
Q psy10114 587 AKQVHKL--VG--HTARVGALAW--NGDMLSSGSRDRMILQRDVRT--PNSQSERRLVGHRQEVCGLKWSPDNQYLASGG 658 (819)
Q Consensus 587 gk~i~tl--~g--Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t--~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS 658 (819)
...+... .+ -...|.-..+ +..+|.++..||.+.-+-+.. +.....++..-...++.--.|+..++.-+.+.
T Consensus 569 ~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~ 648 (1096)
T KOG1897|consen 569 LILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFAL 648 (1096)
T ss_pred cceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEe
Confidence 3222222 11 1223444444 467999999999997665544 33222222233345565556766555555555
Q ss_pred CCCeEEEEECCCCceeEEEecCCCCEEE-EEEcC-CCCeEEEEEccCCCCeEEEEECCCCc--eeEEEcCCCCeEEEEEc
Q psy10114 659 NDNRLYVWNLHSMSPLQTYTEHLAAVKA-IAWSP-HHHGLLASGGGTADRCIRFWNTLTGQ--PMQCVDTGSQVCNLAWS 734 (819)
Q Consensus 659 ~DGtI~IWDl~t~~~i~t~~~h~~~Vts-LafSP-dg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l~~~s~V~sLafS 734 (819)
.|.-..+|.-+ ++.+.+--. -..+.. ..|+. ...--++++ ..+.+++.-+..-+ .++++..+.....+++.
T Consensus 649 sdrP~viY~~n-~kLv~spls-~kev~~~c~f~s~a~~d~l~~~---~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q 723 (1096)
T KOG1897|consen 649 SDRPTVIYSSN-GKLVYSPLS-LKEVNHMCPFNSDAYPDSLASA---NGGALTIGTIDEIQKLHIRTVPLGESPRRICYQ 723 (1096)
T ss_pred CCCCEEEEecC-CcEEEeccc-hHHhhhhcccccccCCceEEEe---cCCceEEEEecchhhcceeeecCCCChhheEec
Confidence 55555555533 222211100 000111 11221 122223333 35666666554422 23445666667777777
Q ss_pred cCCCEEEEEE-------e--cCC---CeEEEEECCCCcEEEEEecC----CCCEEEEEEecC-CCEEEEEeC--------
Q psy10114 735 KHSSELVSTH-------G--YSQ---NQILVWKYPTLTQVAKLTGH----SYRVLYLAMSPD-GEAIVTGAG-------- 789 (819)
Q Consensus 735 pdg~~Lasts-------G--ssD---g~I~IWDl~s~k~l~sl~gH----~~~VtsLafSpD-G~~LaSGS~-------- 789 (819)
+....+.+.+ + ... ..++++|-.+.+.+...+-. ...+.++.|..| +.++++|..
T Consensus 724 ~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~e 803 (1096)
T KOG1897|consen 724 ESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENE 803 (1096)
T ss_pred ccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCC
Confidence 6444443322 1 011 23667776666655433211 123555568877 778888764
Q ss_pred --CCcEEEEECCCCc
Q psy10114 790 --DETLRFWNVFSKV 802 (819)
Q Consensus 790 --DGtIrIWdl~s~~ 802 (819)
.|.|.++.+.+..
T Consensus 804 p~~GRIivfe~~e~~ 818 (1096)
T KOG1897|consen 804 PVNGRIIVFEFEELN 818 (1096)
T ss_pred cccceEEEEEEecCC
Confidence 5789999888733
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.49 Score=44.64 Aligned_cols=99 Identities=18% Similarity=0.239 Sum_probs=66.7
Q ss_pred eEEEEEcC---CC-CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccce
Q psy10114 558 VTSVAWNE---RG-NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 558 VtsLafSp---dG-~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v 632 (819)
|+++++.. || +.|++|+.|..|++|+-+ +.+..+.. .+.|.++.- .+..++.|..+|+|-+|+-.....
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~RlW--- 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDRSQRLW--- 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeCcceee---
Confidence 56666544 33 689999999999999844 55666654 455666666 678899999999999998654322
Q ss_pred EEEecccCCeEEEEECC---CC-CEEEEEECCCeEE
Q psy10114 633 RRLVGHRQEVCGLKWSP---DN-QYLASGGNDNRLY 664 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSp---dg-~~LaSGS~DGtI~ 664 (819)
..+. +..+.++.+.. || ..|++|-.+|.|-
T Consensus 76 -RiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 76 -RIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -eecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 2222 23355655433 23 2688888888774
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.58 E-value=3.2 Score=44.54 Aligned_cols=155 Identities=18% Similarity=0.179 Sum_probs=86.1
Q ss_pred CeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEE-CCCCCccce
Q psy10114 557 SVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRD-VRTPNSQSE 632 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWD-i~t~~~~~v 632 (819)
.+.+.+++++|+.+|... .++.-.+|-...+....... ....+..-+|+ +...+....+....++. ...+.....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~ 103 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPV 103 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeE
Confidence 789999999999887765 22333344333333333321 12366667774 44555545555555553 233332211
Q ss_pred EEE-ecccCCeEEEEECCCCCEEEEEE---CCCeEEEEECC---CC------ceeEEEecCCCCEEEEEEcCCCCeEEEE
Q psy10114 633 RRL-VGHRQEVCGLKWSPDNQYLASGG---NDNRLYVWNLH---SM------SPLQTYTEHLAAVKAIAWSPHHHGLLAS 699 (819)
Q Consensus 633 ~~l-~gH~~~VtsLafSpdg~~LaSGS---~DGtI~IWDl~---t~------~~i~t~~~h~~~VtsLafSPdg~~LLaS 699 (819)
..- ..-...|..+.+||||..+|... .++.|.+--+. .+ .+..........+.+++|.+++..+++.
T Consensus 104 ~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~ 183 (253)
T PF10647_consen 104 EVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLG 183 (253)
T ss_pred EecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEe
Confidence 111 11112899999999999887766 35677776542 22 1122222335688999999998755544
Q ss_pred EccCCCCeEEE-EECC
Q psy10114 700 GGGTADRCIRF-WNTL 714 (819)
Q Consensus 700 GgGs~DgtIrI-WDl~ 714 (819)
.. .++.+.. ....
T Consensus 184 ~~--~~~~~~~~v~~d 197 (253)
T PF10647_consen 184 RS--AGGPVVRLVSVD 197 (253)
T ss_pred CC--CCCceeEEEEcc
Confidence 32 4544433 4443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=95.49 E-value=2.3 Score=52.70 Aligned_cols=222 Identities=12% Similarity=0.075 Sum_probs=130.9
Q ss_pred CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEE
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsL 645 (819)
.+..+++++.++.|.-.|.++|+.+.++......-.. ... ... +-+.+|+-...... ..+..
T Consensus 193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~------~~~-~~c-RGvay~~~p~~~~~---------~~~~~- 254 (764)
T TIGR03074 193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAG------RQH-QTC-RGVSYYDAPAAAAG---------PAAPA- 254 (764)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccc------ccc-ccc-cceEEecCCccccc---------ccccc-
Confidence 3999999999999999999999999888754321110 000 111 23334553221100 00000
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEE-------------EEEEcC--CCCeEEEEEcc-------C
Q psy10114 646 KWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK-------------AIAWSP--HHHGLLASGGG-------T 703 (819)
Q Consensus 646 afSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~Vt-------------sLafSP--dg~~LLaSGgG-------s 703 (819)
.-...++.++.++.|+.+.-.|.++|+.+..+.. .+.|. .+.-.| .+..+++.+++ .
T Consensus 255 ~p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~ 333 (764)
T TIGR03074 255 APADCARRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDE 333 (764)
T ss_pred cccccCCEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccC
Confidence 0012356788899999999999999998877642 11110 011111 12223332211 1
Q ss_pred CCCeEEEEECCCCceeEEEcCCC------------------Ce-EEEEEccCCCEEEEEEec----------------CC
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGS------------------QV-CNLAWSKHSSELVSTHGY----------------SQ 748 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s------------------~V-~sLafSpdg~~LastsGs----------------sD 748 (819)
.+|.|+-+|.++|+.+..++... .+ ..+++++....++.-.|. ..
T Consensus 334 ~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~ 413 (764)
T TIGR03074 334 PSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYS 413 (764)
T ss_pred CCcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCccccc
Confidence 26889999999999987764321 11 234555555555543221 23
Q ss_pred CeEEEEECCCCcEEEEEecCCCC---------EEEEEEec-CCC---EEEEEeCCCcEEEEECCCCceecc
Q psy10114 749 NQILVWKYPTLTQVAKLTGHSYR---------VLYLAMSP-DGE---AIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl~gH~~~---------VtsLafSp-DG~---~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+.|.-.|.++++....++..... ..-+.+.. +|+ .++.++.+|.+.+.|-.+++....
T Consensus 414 ~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~ 484 (764)
T TIGR03074 414 SSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP 484 (764)
T ss_pred ceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence 56778889999998877642111 11122333 564 788999999999999999887654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=95.46 E-value=9.5 Score=47.66 Aligned_cols=278 Identities=10% Similarity=0.112 Sum_probs=152.5
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEE--EcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLW--SACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LW--d~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
.....+.-+..+++++..||.+.-+ |..+++........-...++.--.|+..++.-+.+..|.-..+|.-. ++.+.
T Consensus 586 Il~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n-~kLv~ 664 (1096)
T KOG1897|consen 586 ILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSN-GKLVY 664 (1096)
T ss_pred eeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecC-CcEEE
Confidence 3344444445678888888887544 55555543332222224566656666555433344445545555533 33322
Q ss_pred E-EecCCCCeEEEE-eC----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-----
Q psy10114 592 K-LVGHTARVGALA-WN----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND----- 660 (819)
Q Consensus 592 t-l~gHs~~V~sLa-wn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D----- 660 (819)
+ +. -..+..++ |+ ++.++++.. +.+.+..++.-+....++.. -......+++.+....+++.+..
T Consensus 665 spls--~kev~~~c~f~s~a~~d~l~~~~~-~~l~i~tid~iqkl~irtvp-l~~~prrI~~q~~sl~~~v~s~r~e~~~ 740 (1096)
T KOG1897|consen 665 SPLS--LKEVNHMCPFNSDAYPDSLASANG-GALTIGTIDEIQKLHIRTVP-LGESPRRICYQESSLTFGVLSNRIESSA 740 (1096)
T ss_pred eccc--hHHhhhhcccccccCCceEEEecC-CceEEEEecchhhcceeeec-CCCChhheEecccceEEEEEecccccch
Confidence 1 11 11111122 21 334555443 34445544433322333322 22334555666544444443321
Q ss_pred ---------CeEEEEECCCCceeEEEec----CCCCEEEEEEcCCCCeEEEEEcc--------CCCCeEEEEECCCCcee
Q psy10114 661 ---------NRLYVWNLHSMSPLQTYTE----HLAAVKAIAWSPHHHGLLASGGG--------TADRCIRFWNTLTGQPM 719 (819)
Q Consensus 661 ---------GtI~IWDl~t~~~i~t~~~----h~~~VtsLafSPdg~~LLaSGgG--------s~DgtIrIWDl~tg~~v 719 (819)
..++++|-++.+.+...+- ....+.+..|..|....++.|.+ ...|.|.++....++.+
T Consensus 741 ~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L 820 (1096)
T KOG1897|consen 741 EYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSL 820 (1096)
T ss_pred hhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCce
Confidence 1366777666554433221 12245556688885556666542 24578888887763333
Q ss_pred EE---EcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 720 QC---VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 720 ~~---l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
+. ....+.+.++.. -+|+.+|.. ...|++|+..+.+.+..-..+..++..+...-.|..++.|.--+++.+-
T Consensus 821 ~~v~e~~v~Gav~aL~~-fngkllA~I----n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll 895 (1096)
T KOG1897|consen 821 ELVAETVVKGAVYALVE-FNGKLLAGI----NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLL 895 (1096)
T ss_pred eeeeeeeeccceeehhh-hCCeEEEec----CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEE
Confidence 32 233445555432 367777764 4789999999888877777888889999999999999999988887765
Q ss_pred ECCCC
Q psy10114 797 NVFSK 801 (819)
Q Consensus 797 dl~s~ 801 (819)
.....
T Consensus 896 ~y~~~ 900 (1096)
T KOG1897|consen 896 QYKGD 900 (1096)
T ss_pred EEecc
Confidence 55433
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.21 Score=61.37 Aligned_cols=141 Identities=14% Similarity=0.186 Sum_probs=95.1
Q ss_pred CEEEEE-ECCCeEEEEECCCCceeEEEecCCCC-EEEEEEcCC-----CCeEEEEEccCCCCeEEEEECCCCc--eeE--
Q psy10114 652 QYLASG-GNDNRLYVWNLHSMSPLQTYTEHLAA-VKAIAWSPH-----HHGLLASGGGTADRCIRFWNTLTGQ--PMQ-- 720 (819)
Q Consensus 652 ~~LaSG-S~DGtI~IWDl~t~~~i~t~~~h~~~-VtsLafSPd-----g~~LLaSGgGs~DgtIrIWDl~tg~--~v~-- 720 (819)
++|+.. ...+.|+-.|++.|+.+..++.+... |..++=... ....++ |-.++.+..||.+-.. .+.
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tfl---Gls~n~lfriDpR~~~~k~v~~~ 570 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFL---GLSDNSLFRIDPRLSGNKLVDSQ 570 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEE---EECCCceEEeccCCCCCceeecc
Confidence 344433 35678999999999999999877644 555543211 112222 2268899999998632 232
Q ss_pred --EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 721 --CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 721 --~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.+..+...++++-+.+|. +|+ |+.+|.|++||--..+....+.+-..+|.++..+.||++|+..+ +..+.+.+.
T Consensus 571 ~k~Y~~~~~Fs~~aTt~~G~-iav--gs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 571 SKQYSSKNNFSCFATTEDGY-IAV--GSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ccccccCCCceEEEecCCce-EEE--EeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 223456678888777764 555 78999999999533332334556688999999999999988554 567777776
Q ss_pred C
Q psy10114 799 F 799 (819)
Q Consensus 799 ~ 799 (819)
.
T Consensus 647 ~ 647 (794)
T PF08553_consen 647 L 647 (794)
T ss_pred e
Confidence 3
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=95.36 E-value=3 Score=51.82 Aligned_cols=157 Identities=11% Similarity=0.088 Sum_probs=89.7
Q ss_pred CCceeeeccCCCeEEEEECCCCCccceEEEecccCCe-------------EEEEECC--CCCEEEEEEC----------C
Q psy10114 606 NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV-------------CGLKWSP--DNQYLASGGN----------D 660 (819)
Q Consensus 606 ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~V-------------tsLafSp--dg~~LaSGS~----------D 660 (819)
+++.++.++.|+.+.-.|.++++.. -.+ +..+.| ..+.-.| .+..+++|+. +
T Consensus 259 ~~~rV~~~T~Dg~LiALDA~TGk~~--W~f-g~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~ 335 (764)
T TIGR03074 259 CARRIILPTSDARLIALDADTGKLC--EDF-GNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPS 335 (764)
T ss_pred cCCEEEEecCCCeEEEEECCCCCEE--EEe-cCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCC
Confidence 4567778888888888888887632 111 111111 0111122 2345666643 6
Q ss_pred CeEEEEECCCCceeEEEecC---------CC--------CE-EEEEEcCCCCeEEEEEc---------------cCCCCe
Q psy10114 661 NRLYVWNLHSMSPLQTYTEH---------LA--------AV-KAIAWSPHHHGLLASGG---------------GTADRC 707 (819)
Q Consensus 661 GtI~IWDl~t~~~i~t~~~h---------~~--------~V-tsLafSPdg~~LLaSGg---------------Gs~Dgt 707 (819)
|.|+-+|.++|+.+..+..- .+ .+ ...+++++...++.-.| ....+.
T Consensus 336 G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~s 415 (764)
T TIGR03074 336 GVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSS 415 (764)
T ss_pred cEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccce
Confidence 88999999999988877521 00 11 22344554443333111 012356
Q ss_pred EEEEECCCCceeEEEcC----------CCCeEEEEEcc-CCC-EEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 708 IRFWNTLTGQPMQCVDT----------GSQVCNLAWSK-HSS-ELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~----------~s~V~sLafSp-dg~-~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
|.-.|.++|+....++. ..+..-+.+.. +|+ .-++..+..+|.+.++|.++++.+...
T Consensus 416 lvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 416 LVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred EEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 77788899988766643 12222223333 553 223333889999999999999988654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.36 E-value=2.8 Score=45.91 Aligned_cols=161 Identities=12% Similarity=0.162 Sum_probs=104.6
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecC-CCCeEEEEe--CCceeeeccCCCeEEEEECCCCC
Q psy10114 552 SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGH-TARVGALAW--NGDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 552 ~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gH-s~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~ 628 (819)
.+-...+.++.|+|+.+.|++....+.-.|+=..+|+.++++.-. -..--.+.+ ++.+.++--+++.+.++.+....
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 344556999999999999998888887778777789998887621 222335666 44466666678888887776542
Q ss_pred ccc-----eEEE---ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-e--eEEEecC-------CCCEEEEEEc
Q psy10114 629 SQS-----ERRL---VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-P--LQTYTEH-------LAAVKAIAWS 690 (819)
Q Consensus 629 ~~~-----v~~l---~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-~--i~t~~~h-------~~~VtsLafS 690 (819)
... ...+ ...+...-+++|+|.+..|..+-+.+-+.|+....+. . ......+ -..|.++.|+
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 110 1111 1125567899999999999988888877777665322 1 1111111 2346677888
Q ss_pred CCCCeEEEEEccCCCCeEEEEECC
Q psy10114 691 PHHHGLLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 691 Pdg~~LLaSGgGs~DgtIrIWDl~ 714 (819)
+....+++-+. +++.+.-.|..
T Consensus 242 ~~~~~LLVLS~--ESr~l~Evd~~ 263 (316)
T COG3204 242 AITNSLLVLSD--ESRRLLEVDLS 263 (316)
T ss_pred CCCCcEEEEec--CCceEEEEecC
Confidence 77777777654 66666666654
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=95.24 E-value=7.9 Score=44.78 Aligned_cols=255 Identities=13% Similarity=0.154 Sum_probs=113.4
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEc-----------CCCCEEEEEe-cCceEEEeecCC----c
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWN-----------ERGNLVAVGT-HHGYVQVWDVSV----A 587 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafS-----------pdG~~LAsGs-~DGtI~IWDl~t----g 587 (819)
+.++++..|-. +..-+++.....+..-.++....-|+ .+.++|++.+ .++.|.|.|+.+ .
T Consensus 37 D~LatVDvdP~----S~tYgqVIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dPr~P 112 (461)
T PF05694_consen 37 DYLATVDVDPD----SPTYGQVIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDPRKP 112 (461)
T ss_dssp -EEEEEE--TT----STTTTSEEEEEE-SSS---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-TTS-
T ss_pred CeEEEEECCCC----CCCcccEEEEEeCCCCCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCCCCC
Confidence 35666655421 01123444444554444566666665 2346777766 678999999873 3
Q ss_pred eEEEEEec---CC-C------CeEEEEeCCceeeec------cCCCeEEEEECCCCCccceEEEecc---cCCeEEEEEC
Q psy10114 588 KQVHKLVG---HT-A------RVGALAWNGDMLSSG------SRDRMILQRDVRTPNSQSERRLVGH---RQEVCGLKWS 648 (819)
Q Consensus 588 k~i~tl~g---Hs-~------~V~sLawng~~LaSG------S~DGtI~IWDi~t~~~~~v~~l~gH---~~~VtsLafS 648 (819)
+..+.++. +. . .+.|+. +|+.++|+ ..-|.+.+.|-++.+. ....... ..--..+-|.
T Consensus 113 ~l~KvIe~~ev~~k~g~s~PHT~Hclp-~G~imIS~lGd~~G~g~Ggf~llD~~tf~v--~g~We~~~~~~~~gYDfw~q 189 (461)
T PF05694_consen 113 RLHKVIEPEEVFEKTGLSRPHTVHCLP-DGRIMISALGDADGNGPGGFVLLDGETFEV--KGRWEKDRGPQPFGYDFWYQ 189 (461)
T ss_dssp EEEEEE-HHHHHHHH-EEEEEEEEE-S-S--EEEEEEEETTS-S--EEEEE-TTT--E--EEE--SB-TT------EEEE
T ss_pred ceEeeeCHHHHHhhcCCCCCceeeecC-CccEEEEeccCCCCCCCCcEEEEcCccccc--cceeccCCCCCCCCCCeEEc
Confidence 45555542 11 1 111211 56666653 2224566666655331 1222221 1223566778
Q ss_pred CCCCEEEEEEC--------------------CCeEEEEECCCCceeEEEecCC--CCEEEEEEc--CCCCeEEEEEccCC
Q psy10114 649 PDNQYLASGGN--------------------DNRLYVWNLHSMSPLQTYTEHL--AAVKAIAWS--PHHHGLLASGGGTA 704 (819)
Q Consensus 649 pdg~~LaSGS~--------------------DGtI~IWDl~t~~~i~t~~~h~--~~VtsLafS--Pdg~~LLaSGgGs~ 704 (819)
|..+.++|... ..++.+||..+.+.++++.-.. .....|.|. |+...-++.+. .
T Consensus 190 pr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~a--L 267 (461)
T PF05694_consen 190 PRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCA--L 267 (461)
T ss_dssp TTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE---
T ss_pred CCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEe--c
Confidence 88888887652 3579999999999999987433 234566664 44554444433 3
Q ss_pred CCeEEE-EECCCCc----eeEEEcC------------------CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC--
Q psy10114 705 DRCIRF-WNTLTGQ----PMQCVDT------------------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL-- 759 (819)
Q Consensus 705 DgtIrI-WDl~tg~----~v~~l~~------------------~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~-- 759 (819)
.++|.. |....++ .+..+.. ..-++.+..|.|.++|++. ....|.|+.||+...
T Consensus 268 ss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs-~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 268 SSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVS-NWLHGDVRQYDISDPFN 346 (461)
T ss_dssp -EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEE-ETTTTEEEEEE-SSTTS
T ss_pred cceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEE-cccCCcEEEEecCCCCC
Confidence 444444 4434443 1222211 2347899999999999986 678999999999743
Q ss_pred -cEEEEEe-c---------------CCCCEEEEEEecCCCEEEEEe
Q psy10114 760 -TQVAKLT-G---------------HSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 760 -k~l~sl~-g---------------H~~~VtsLafSpDG~~LaSGS 788 (819)
+.+.++. | -.+...-+..|-||+.|...+
T Consensus 347 Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 347 PKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp -EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred CcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 3333332 1 112346788999999887654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.23 E-value=6.1 Score=44.64 Aligned_cols=141 Identities=16% Similarity=0.247 Sum_probs=76.9
Q ss_pred CCeEEEEEcCCCCEEEEEe-----------cCc-eEEEeecCC--ce--EEEEEecCCCCeEEEEeC-CceeeeccCCCe
Q psy10114 556 NSVTSVAWNERGNLVAVGT-----------HHG-YVQVWDVSV--AK--QVHKLVGHTARVGALAWN-GDMLSSGSRDRM 618 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs-----------~DG-tI~IWDl~t--gk--~i~tl~gHs~~V~sLawn-g~~LaSGS~DGt 618 (819)
.....|+|.++|+++++-. ..+ .|.+++-.+ |+ ....+-..-.....+++. +. |++++.+..
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~~i 92 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVATPPDI 92 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeCCCeE
Confidence 4567899999998776642 223 677776432 32 233443333455678873 33 555555544
Q ss_pred EEEEECCCC-----Cccce-EEEec----ccCCeEEEEECCCCCEEEEEECC-------------------CeEEEEECC
Q psy10114 619 ILQRDVRTP-----NSQSE-RRLVG----HRQEVCGLKWSPDNQYLASGGND-------------------NRLYVWNLH 669 (819)
Q Consensus 619 I~IWDi~t~-----~~~~v-~~l~g----H~~~VtsLafSpdg~~LaSGS~D-------------------GtI~IWDl~ 669 (819)
.++.|.... +...+ ..+.. +......++|.|||.+.++-+.. |.|.-+|..
T Consensus 93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pd 172 (367)
T TIGR02604 93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPD 172 (367)
T ss_pred EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecC
Confidence 445455432 11111 11211 12347789999999876655421 345566655
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
+++. ..+...-.....++|+++|+.+++
T Consensus 173 g~~~-e~~a~G~rnp~Gl~~d~~G~l~~t 200 (367)
T TIGR02604 173 GGKL-RVVAHGFQNPYGHSVDSWGDVFFC 200 (367)
T ss_pred CCeE-EEEecCcCCCccceECCCCCEEEE
Confidence 4443 233222333468999999875443
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.12 E-value=5.9 Score=43.35 Aligned_cols=235 Identities=16% Similarity=0.179 Sum_probs=138.7
Q ss_pred CeEEEEEcCCC-CEEEEEecCce-EEEeecCCceEEEEEecCCCCe----EEEEeCCceeeeccCC-----CeEEEEECC
Q psy10114 557 SVTSVAWNERG-NLVAVGTHHGY-VQVWDVSVAKQVHKLVGHTARV----GALAWNGDMLSSGSRD-----RMILQRDVR 625 (819)
Q Consensus 557 ~VtsLafSpdG-~~LAsGs~DGt-I~IWDl~tgk~i~tl~gHs~~V----~sLawng~~LaSGS~D-----GtI~IWDi~ 625 (819)
.-..++++|.. .-++.+-.-|+ ..++|....+...++...+++= ...+-+|.+|...-+| |.|-+||.+
T Consensus 69 R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 69 RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 34457788754 45666666565 4678988877766654333221 1222356677665443 789999998
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEEC------C------------CeEEEEECCCCceeEEEe----cCCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN------D------------NRLYVWNLHSMSPLQTYT----EHLAA 683 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~------D------------GtI~IWDl~t~~~i~t~~----~h~~~ 683 (819)
.. .+.+..+..|.-.-..+.|.+||+.++.+.. | -++.+.|..+++.+.+.. .+.-.
T Consensus 149 ~~-fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS 227 (366)
T COG3490 149 EG-FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS 227 (366)
T ss_pred cc-cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence 43 3456677778877888999999999887643 1 123444545555443322 24556
Q ss_pred EEEEEEcCCCCeEEEEEc-cC-CCCeEEEEECCCCceeEEEcC--------CCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 684 VKAIAWSPHHHGLLASGG-GT-ADRCIRFWNTLTGQPMQCVDT--------GSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 684 VtsLafSPdg~~LLaSGg-Gs-~DgtIrIWDl~tg~~v~~l~~--------~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
|..++..++|...+.+-- |. .|.--.+=-...|+++.-++. ...|-+++.+.+...++.+ .-..+...+
T Consensus 228 iRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lT-SP~GN~~vi 306 (366)
T COG3490 228 IRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALT-SPRGNRAVI 306 (366)
T ss_pred eeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEe-cCCCCeEEE
Confidence 888888888874443210 00 111111111233444444432 2457788887766666654 556778899
Q ss_pred EECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 754 WDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
||..++..+..-.- ..+..++- ...-++..+.+|.+.++.
T Consensus 307 ~da~tG~vv~~a~l--~daaGva~--~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 307 WDAATGAVVSEAAL--PDAAGVAA--AKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred EEcCCCcEEecccc--ccccccee--ccCceEEecCCceEEecc
Confidence 99999988754321 12233333 333355667788888873
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.03 E-value=1.9 Score=46.91 Aligned_cols=215 Identities=13% Similarity=0.129 Sum_probs=120.8
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-----ceEEEeecCCc-eEEEEEecCCCCeEEEEe--
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVA-KQVHKLVGHTARVGALAW-- 605 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tg-k~i~tl~gHs~~V~sLaw-- 605 (819)
...++|..+.+...+..-.....---.=.||+||.+|...-.| |.|-|||...+ +.+-.+..|.-.-..+.|
T Consensus 92 f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~ 171 (366)
T COG3490 92 FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMA 171 (366)
T ss_pred eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEec
Confidence 3567787776544332211111112224799999999876544 78999998754 456677777776677777
Q ss_pred CCceeeeccC------------------CCeEEEEECCCCCccceEEEe--cccCCeEEEEECCCCCEEEEEECCCe---
Q psy10114 606 NGDMLSSGSR------------------DRMILQRDVRTPNSQSERRLV--GHRQEVCGLKWSPDNQYLASGGNDNR--- 662 (819)
Q Consensus 606 ng~~LaSGS~------------------DGtI~IWDi~t~~~~~v~~l~--gH~~~VtsLafSpdg~~LaSGS~DGt--- 662 (819)
+|..++.+.. .-++.+.|..+++.....++. .+.-.|.-++..+||...+.+-..|.
T Consensus 172 DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d 251 (366)
T COG3490 172 DGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRND 251 (366)
T ss_pred CCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCcc
Confidence 6776665532 112334444444433333333 34456777888888776555433221
Q ss_pred --EEEEECCCCceeEEEec-------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEE
Q psy10114 663 --LYVWNLHSMSPLQTYTE-------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAW 733 (819)
Q Consensus 663 --I~IWDl~t~~~i~t~~~-------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLaf 733 (819)
-.+=-...++++.-+.. -..-|-+|+.+-+...+.+++- ..+...+||..+|..+..... .....++
T Consensus 252 ~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP--~GN~~vi~da~tG~vv~~a~l-~daaGva- 327 (366)
T COG3490 252 LPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSP--RGNRAVIWDAATGAVVSEAAL-PDAAGVA- 327 (366)
T ss_pred CCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecC--CCCeEEEEEcCCCcEEecccc-cccccce-
Confidence 11111233444443321 1234677888877776666654 667788999999987765422 1122233
Q ss_pred ccCCCEEEEEEecCCCeEEEEE
Q psy10114 734 SKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWD 755 (819)
+...-+++ .+.+|.+.++.
T Consensus 328 -~~~~gf~v--ssg~G~~~~~s 346 (366)
T COG3490 328 -AAKGGFAV--SSGQGRIIFYS 346 (366)
T ss_pred -eccCceEE--ecCCceEEecc
Confidence 23333444 23467777664
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=95.00 E-value=7.4 Score=43.16 Aligned_cols=267 Identities=12% Similarity=0.103 Sum_probs=121.3
Q ss_pred eEEEEEec-CCeEEEEECCCeEEEEEcCCCc-eEEEE-eccCC-CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 515 YLNLVDWS-SQNVLSVGLGSCVYLWSACTSQ-VTRLC-DLSAD-GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~-~~~l~-~l~~h-~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
.+..+.|. ++.-.+++..+.|.-= ...|+ ..... ..... .-...+|.|..+ ..+++| ..|. .+...+.|+.-
T Consensus 18 ~l~dV~F~d~~~G~~VG~~g~il~T-~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~ivG-~~g~-ll~T~DgG~tW 93 (302)
T PF14870_consen 18 PLLDVAFVDPNHGWAVGAYGTILKT-TDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIVG-EPGL-LLHTTDGGKTW 93 (302)
T ss_dssp -EEEEEESSSS-EEEEETTTEEEEE-SSTTSS-EE-----S-----EEEEEEEETT-EEEEEE-ETTE-EEEESSTTSS-
T ss_pred ceEEEEEecCCEEEEEecCCEEEEE-CCCCccccccccCCCccceeeEEEEEecCC-ceEEEc-CCce-EEEecCCCCCc
Confidence 45666666 4566667777765222 22222 22211 11111 234677888643 344444 4553 33333444433
Q ss_pred EEEe---cCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 591 HKLV---GHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 591 ~tl~---gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
..+. .-.+....+.. +.+....++..|.|.. -..+...-......-.+.+..+.-++||+++++++..+...-|
T Consensus 94 ~~v~l~~~lpgs~~~i~~l~~~~~~l~~~~G~iy~--T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~ 171 (302)
T PF14870_consen 94 ERVPLSSKLPGSPFGITALGDGSAELAGDRGAIYR--TTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSW 171 (302)
T ss_dssp EE----TT-SS-EEEEEEEETTEEEEEETT--EEE--ESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE
T ss_pred EEeecCCCCCCCeeEEEEcCCCcEEEEcCCCcEEE--eCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEe
Confidence 3322 12223333333 4444333444555533 2222222334445555778889999999988888776666778
Q ss_pred ECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE-CCCCceeEE--Ec---CCCCeEEEEEccCCCEE
Q psy10114 667 NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN-TLTGQPMQC--VD---TGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 667 Dl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD-l~tg~~v~~--l~---~~s~V~sLafSpdg~~L 740 (819)
|--...=...-......|.++.|.|++...+++ ..+.|++=+ ....+.-.. .+ .+-.+..++|.+++...
T Consensus 172 ~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~----~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~w 247 (302)
T PF14870_consen 172 DPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA----RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIW 247 (302)
T ss_dssp -TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE----TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EE
T ss_pred cCCCccceEEccCccceehhceecCCCCEEEEe----CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEE
Confidence 754322122222356889999999998755554 578888877 222222222 11 23348899999887666
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEe---cCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLT---GHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~---gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
++ |. .|.+ +.....|+.=.... .-......+.|..+.+-++ -+.||.|.-|
T Consensus 248 a~--gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 248 AV--GG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp EE--ES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEEEEE
T ss_pred EE--eC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEEEEe
Confidence 65 43 3433 33444454433333 2244578888876655444 4678877654
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=94.93 E-value=2 Score=49.40 Aligned_cols=195 Identities=12% Similarity=0.148 Sum_probs=94.8
Q ss_pred ceeeecc-CCCeEEEEECCCCCcc--ceEEEec---cc----CCeEEEEECCCCCEEEEEE--CC----CeEEEEECCCC
Q psy10114 608 DMLSSGS-RDRMILQRDVRTPNSQ--SERRLVG---HR----QEVCGLKWSPDNQYLASGG--ND----NRLYVWNLHSM 671 (819)
Q Consensus 608 ~~LaSGS-~DGtI~IWDi~t~~~~--~v~~l~g---H~----~~VtsLafSpdg~~LaSGS--~D----GtI~IWDl~t~ 671 (819)
++|+..+ .++.|.+.|+.+.... ..+.+.. +. ..-..+..-|+|+.++++- .+ |.+.+.|-++.
T Consensus 88 r~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf 167 (461)
T PF05694_consen 88 RYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF 167 (461)
T ss_dssp -EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred CcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence 3555544 7899999999853221 2222221 11 1223344567898887752 22 45888898888
Q ss_pred ceeEEEecCC---CCEEEEEEcCCCCeEEEEEc-----------------cCCCCeEEEEECCCCceeEEEcCCC---Ce
Q psy10114 672 SPLQTYTEHL---AAVKAIAWSPHHHGLLASGG-----------------GTADRCIRFWNTLTGQPMQCVDTGS---QV 728 (819)
Q Consensus 672 ~~i~t~~~h~---~~VtsLafSPdg~~LLaSGg-----------------Gs~DgtIrIWDl~tg~~v~~l~~~s---~V 728 (819)
+......... .--..+-|.|..+.+++|.= +....++.+||+.+.+.+++++.+. -.
T Consensus 168 ~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~p 247 (461)
T PF05694_consen 168 EVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMP 247 (461)
T ss_dssp -EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEE
T ss_pred cccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCce
Confidence 7777765432 23456778888776665531 2345789999999999999998763 24
Q ss_pred EEEEEcc--CCCEEEEEEecCCCeEEEE-ECCCCc----EEEEEecC-----------------CCCEEEEEEecCCCEE
Q psy10114 729 CNLAWSK--HSSELVSTHGYSQNQILVW-KYPTLT----QVAKLTGH-----------------SYRVLYLAMSPDGEAI 784 (819)
Q Consensus 729 ~sLafSp--dg~~LastsGssDg~I~IW-Dl~s~k----~l~sl~gH-----------------~~~VtsLafSpDG~~L 784 (819)
..+.|.. +..+=++.+.- .++|..| .-..++ .+.++..- ..-|+.+..|.|.++|
T Consensus 248 LEvRflH~P~~~~gFvg~aL-ss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfL 326 (461)
T PF05694_consen 248 LEVRFLHDPDANYGFVGCAL-SSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFL 326 (461)
T ss_dssp EEEEE-SSTT--EEEEEEE---EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EE
T ss_pred EEEEecCCCCccceEEEEec-cceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEE
Confidence 5666654 44554443332 3344444 334433 22222211 2347999999999998
Q ss_pred EEEe-CCCcEEEEECCCCce
Q psy10114 785 VTGA-GDETLRFWNVFSKVR 803 (819)
Q Consensus 785 aSGS-~DGtIrIWdl~s~~~ 803 (819)
..++ .+|.||.||+.....
T Consensus 327 Yvs~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 327 YVSNWLHGDVRQYDISDPFN 346 (461)
T ss_dssp EEEETTTTEEEEEE-SSTTS
T ss_pred EEEcccCCcEEEEecCCCCC
Confidence 7655 589999999987554
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=94.88 E-value=1.3 Score=50.21 Aligned_cols=220 Identities=17% Similarity=0.116 Sum_probs=111.2
Q ss_pred eecCCceEEEEEecCCCCeEEEEe-------CCce-eeeccCCC--eEEEEECCCCCccceEEEeccc-CCeEEEEECCC
Q psy10114 582 WDVSVAKQVHKLVGHTARVGALAW-------NGDM-LSSGSRDR--MILQRDVRTPNSQSERRLVGHR-QEVCGLKWSPD 650 (819)
Q Consensus 582 WDl~tgk~i~tl~gHs~~V~sLaw-------ng~~-LaSGS~DG--tI~IWDi~t~~~~~v~~l~gH~-~~VtsLafSpd 650 (819)
-|..+|..+..+.........+-| +|+. |+++..|| .+...|+.+++. ..+.... ....+..++++
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i---~QLTdg~g~~~~g~~~s~~ 91 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEI---TQLTDGPGDNTFGGFLSPD 91 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EE---EE---SS-B-TTT-EE-TT
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEE---EECccCCCCCccceEEecC
Confidence 377888888888866665555555 4554 44454455 566667777553 3333332 22335667888
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEc--CCCCeEEEEEc-------------------cCCCCeEE
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWS--PHHHGLLASGG-------------------GTADRCIR 709 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafS--Pdg~~LLaSGg-------------------Gs~DgtIr 709 (819)
++.++-...+..|.-.|+++.+....+......+-...|. .++..++..-. ......|.
T Consensus 92 ~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~ 171 (386)
T PF14583_consen 92 DRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIF 171 (386)
T ss_dssp SSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEE
T ss_pred CCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEE
Confidence 8888777677789999999988766666666666556664 34443322211 01234677
Q ss_pred EEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE--ecCCCe-EEEEECC-CCcEEEEEecC--CCCEEEEEEecCCCE
Q psy10114 710 FWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH--GYSQNQ-ILVWKYP-TLTQVAKLTGH--SYRVLYLAMSPDGEA 783 (819)
Q Consensus 710 IWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts--GssDg~-I~IWDl~-s~k~l~sl~gH--~~~VtsLafSpDG~~ 783 (819)
-.|+.+|+....+.....+.-+.|||....+++-+ |..+.. -+||-++ .+.....+..+ ...+..=-|++||..
T Consensus 172 ~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~ 251 (386)
T PF14583_consen 172 TIDLKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGST 251 (386)
T ss_dssp EEETTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-
T ss_pred EEECCCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCE
Confidence 78999998877777788899999999777666543 222221 2445443 33333333333 233556678999987
Q ss_pred EEEE-----eCCCcEEEEECCCCcee
Q psy10114 784 IVTG-----AGDETLRFWNVFSKVRS 804 (819)
Q Consensus 784 LaSG-----S~DGtIrIWdl~s~~~~ 804 (819)
|.-- +.+..|.-.|+.+++..
T Consensus 252 i~y~~~~~~~~~~~i~~~d~~t~~~~ 277 (386)
T PF14583_consen 252 IWYDSYTPGGQDFWIAGYDPDTGERR 277 (386)
T ss_dssp EEEEEEETTT--EEEEEE-TTT--EE
T ss_pred EEEEeecCCCCceEEEeeCCCCCCce
Confidence 6542 22446777788776543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.9 Score=53.66 Aligned_cols=148 Identities=10% Similarity=0.036 Sum_probs=70.7
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCcee--EEEecCCCCEEEEEEcCCCCeEEEEEccCCC----CeEEEEECCCCce
Q psy10114 650 DNQYLASGGND-----NRLYVWNLHSMSPL--QTYTEHLAAVKAIAWSPHHHGLLASGGGTAD----RCIRFWNTLTGQP 718 (819)
Q Consensus 650 dg~~LaSGS~D-----GtI~IWDl~t~~~i--~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D----gtIrIWDl~tg~~ 718 (819)
+++.++.||.+ +.+..||..+.+=. ..+.........+. .+..+++.||-..+ +.+..||..+++-
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~---~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W 418 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVN---VNNLIYVIGGISKNDELLKTVECFSLNTNKW 418 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEE---ECCEEEEECCcCCCCcccceEEEEeCCCCee
Confidence 56777888765 34777887665311 11111111111111 23456666651111 4688899887643
Q ss_pred eEEEcCC--CCeEEEEEccCCCEEEEEEecCC-------CeEEEEECCCCcEEE--EEecCCCCEEEEEEecCCCEEEEE
Q psy10114 719 MQCVDTG--SQVCNLAWSKHSSELVSTHGYSQ-------NQILVWKYPTLTQVA--KLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 719 v~~l~~~--s~V~sLafSpdg~~LastsGssD-------g~I~IWDl~s~k~l~--sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
...-... ..-.+++ ..+ +.+++.+|... ..+.+||..+.+-.. .+.........+. -+++.++.|
T Consensus 419 ~~~~~~p~~r~~~~~~-~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~G 494 (534)
T PHA03098 419 SKGSPLPISHYGGCAI-YHD-GKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVG 494 (534)
T ss_pred eecCCCCccccCceEE-EEC-CEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEc
Confidence 3221111 1111222 123 34555434321 237888877554322 1111111112222 267777777
Q ss_pred eCC-----CcEEEEECCCCcee
Q psy10114 788 AGD-----ETLRFWNVFSKVRS 804 (819)
Q Consensus 788 S~D-----GtIrIWdl~s~~~~ 804 (819)
+.+ ..+..+|..+.+-.
T Consensus 495 G~~~~~~~~~v~~yd~~~~~W~ 516 (534)
T PHA03098 495 GDKYEYYINEIEVYDDKTNTWT 516 (534)
T ss_pred CCcCCcccceeEEEeCCCCEEE
Confidence 654 46888998877654
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.095 Score=64.71 Aligned_cols=100 Identities=22% Similarity=0.256 Sum_probs=71.3
Q ss_pred CCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE
Q psy10114 597 TARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 597 s~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t 676 (819)
.+.+.+.+.-+..++.|+..|.+...|....-.. ...-..-.++|++++|+.+|+.++.|-.+|.|.+||+..+++++.
T Consensus 89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~-~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~ 167 (1206)
T KOG2079|consen 89 AAGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGP-LHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKV 167 (1206)
T ss_pred CcceeeeeeeeeeEEEEcCchhhhhhhhhcccch-hhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceee
Confidence 3344455555556777788888888777663211 122223457899999999999999999999999999999999999
Q ss_pred EecCCCCEEEEE---EcCCCCeEE
Q psy10114 677 YTEHLAAVKAIA---WSPHHHGLL 697 (819)
Q Consensus 677 ~~~h~~~VtsLa---fSPdg~~LL 697 (819)
+..|.++++++- +..++..++
T Consensus 168 i~e~~ap~t~vi~v~~t~~nS~ll 191 (1206)
T KOG2079|consen 168 ITEHGAPVTGVIFVGRTSQNSKLL 191 (1206)
T ss_pred eeecCCccceEEEEEEeCCCcEEE
Confidence 988877666554 444555333
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=94.58 E-value=12 Score=43.45 Aligned_cols=85 Identities=11% Similarity=0.039 Sum_probs=55.0
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC--CCCeEEEEEc----------------cCCCEEE
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--GSQVCNLAWS----------------KHSSELV 741 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--~s~V~sLafS----------------pdg~~La 741 (819)
....+.+++.+|++...++ .. .=|.|.++|+.++..++..+. +.++.=+... +....++
T Consensus 306 ~~R~~~~i~~sP~~~laA~-tD--slGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L 382 (415)
T PF14655_consen 306 SKREGESICLSPSGRLAAV-TD--SLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFL 382 (415)
T ss_pred CCceEEEEEECCCCCEEEE-Ec--CCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEE
Confidence 3445788999999874444 33 579999999999887765532 1111111110 1112445
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEec
Q psy10114 742 STHGYSQNQILVWKYPTLTQVAKLTG 767 (819)
Q Consensus 742 stsGssDg~I~IWDl~s~k~l~sl~g 767 (819)
++..-.-|.|.||+++++..+..+..
T Consensus 383 vIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 383 VIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEEeccCCeEEEEecCCCCEEEEEEe
Confidence 55567789999999999988877653
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=94.56 E-value=10 Score=42.69 Aligned_cols=201 Identities=13% Similarity=0.082 Sum_probs=106.7
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC-Ce
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA-RV 600 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~-~V 600 (819)
..+.+.++..+|.|.-.|.++++..-...+......+.+-.+..+|+ +++|+.+|.+..+|..+|+.+........ .+
T Consensus 67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~ 145 (370)
T COG1520 67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYY 145 (370)
T ss_pred eCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEE
Confidence 34566666777888888888776432111111012222222333665 88889999999999989999888876551 11
Q ss_pred E-EEEeCCceeeeccCCCeEEEEECCCCCccceEEEec-ccCCeEEEEECCCCCEEEEEEC--CCeEEEEECCCCceeEE
Q psy10114 601 G-ALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVG-HRQEVCGLKWSPDNQYLASGGN--DNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 601 ~-sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g-H~~~VtsLafSpdg~~LaSGS~--DGtI~IWDl~t~~~i~t 676 (819)
. ........+..++.+|.+...|..+++......... -...+.+-... ....+..+.. ++.+.-.|.++++....
T Consensus 146 ~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~-~~~~vy~~~~~~~~~~~a~~~~~G~~~w~ 224 (370)
T COG1520 146 ASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAI-ASGTVYVGSDGYDGILYALNAEDGTLKWS 224 (370)
T ss_pred ecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCcee-ecceEEEecCCCcceEEEEEccCCcEeee
Confidence 1 111133445555577888888887766422211111 01111111112 2234444544 66788888888887666
Q ss_pred EecC----CCCEEEEEEcCCCCeEEEEE---ccCCCCeEEEEECCCCceeEEEcCC
Q psy10114 677 YTEH----LAAVKAIAWSPHHHGLLASG---GGTADRCIRFWNTLTGQPMQCVDTG 725 (819)
Q Consensus 677 ~~~h----~~~VtsLafSPdg~~LLaSG---gGs~DgtIrIWDl~tg~~v~~l~~~ 725 (819)
.+.+ ...+........+ .+.+.+ .+..++.+...|..+|+.+......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 225 QKVSQTIGRTAISTTPAVDGG-PVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeeecccCcccccccccccCc-eEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 4311 1111001111111 111110 0226777888999999988877653
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=94.48 E-value=8.8 Score=41.68 Aligned_cols=179 Identities=13% Similarity=0.147 Sum_probs=111.2
Q ss_pred CCeEEEEEcCCCCEEEEEecCc--eEEEeecCCceEEEEEecCCCC-eEEEEe-CCceeeeccCCCeEEEEECCCCCccc
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHG--YVQVWDVSVAKQVHKLVGHTAR-VGALAW-NGDMLSSGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DG--tI~IWDl~tgk~i~tl~gHs~~-V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~ 631 (819)
.-...+.|..+|.++-+.+.-| .|+.+|+++++......-...- --.++. ++....-.-.++...+||..+-+.
T Consensus 45 aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~-- 122 (264)
T PF05096_consen 45 AFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKK-- 122 (264)
T ss_dssp -EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEE--
T ss_pred ccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceE--
Confidence 3445688877787777776655 7899999999877665432211 112333 333444445678889999987543
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC-----CCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH-----LAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h-----~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
+.++. ..++=.+++ .|++.|+.+.....+.++|..+.+...++... -..++.+.+- +| .+.|-- -...
T Consensus 123 ~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G-~IyANV--W~td 195 (264)
T PF05096_consen 123 IGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NG-KIYANV--WQTD 195 (264)
T ss_dssp EEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TT-EEEEEE--TTSS
T ss_pred EEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cC-EEEEEe--CCCC
Confidence 23332 234667777 46777777777789999999988877766532 2345667775 34 355543 2567
Q ss_pred eEEEEECCCCceeEEEcC----------------CCCeEEEEEccCCCEEEEE
Q psy10114 707 CIRFWNTLTGQPMQCVDT----------------GSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~~----------------~s~V~sLafSpdg~~Last 743 (819)
.|...|..+|+.+..++. ..-.+.+|+.|..+.++++
T Consensus 196 ~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vT 248 (264)
T PF05096_consen 196 RIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVT 248 (264)
T ss_dssp EEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEE
T ss_pred eEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEE
Confidence 788889999998876621 1337899999998888886
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.054 Score=56.79 Aligned_cols=141 Identities=16% Similarity=0.153 Sum_probs=75.9
Q ss_pred EEecCceEEEeecCCceEE-EEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 572 VGTHHGYVQVWDVSVAKQV-HKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 572 sGs~DGtI~IWDl~tgk~i-~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
.-+.||.|.-+++...+.- +.-.-|... ..+.=-+..++.|+.+|.|.+|.........-....+.....+.+.-..+
T Consensus 35 ~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~ 113 (238)
T KOG2444|consen 35 ATSADGLVRERKVRKHKESCRSERFIDEG-QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRD 113 (238)
T ss_pred cccCCcccccchhhhhhhhhhhhhhhhcc-eeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccc
Confidence 3455677766666543221 111111111 11111356789999999999998874332222222222333444444456
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEEecCC-CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSPLQTYTEHL-AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~-~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~ 714 (819)
+.+..+++.||.|+.|++.-.+.+.....|. .++.....+..++.+..+- -+.|..++.|++.
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~-~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIAD-TSHDRVLKKWNVE 177 (238)
T ss_pred cceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeec-cccchhhhhcchh
Confidence 6788999999999999998887776666665 3333333333333222220 1144555555543
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.83 E-value=14 Score=41.42 Aligned_cols=262 Identities=13% Similarity=0.099 Sum_probs=128.1
Q ss_pred EEEe-cCCeEEEEECCCeEEEEEcCCC-ceEEEE-eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-ceEEEEE
Q psy10114 518 LVDW-SSQNVLSVGLGSCVYLWSACTS-QVTRLC-DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-AKQVHKL 593 (819)
Q Consensus 518 ~ldw-S~~~LLa~g~Dg~V~LWd~~tg-~~~~l~-~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-gk~i~tl 593 (819)
.+.| ++++.++++.++.|..=. +.| ...+.. .+......+.++.|..+ ..+++| ..|.| +..++ |+.-..+
T Consensus 50 ~v~F~d~~~g~avG~~G~il~T~-DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~~G-~~g~i--~~S~DgG~tW~~~ 124 (334)
T PRK13684 50 DIAFTDPNHGWLVGSNRTLLETN-DGGETWEERSLDLPEENFRLISISFKGD-EGWIVG-QPSLL--LHTTDGGKNWTRI 124 (334)
T ss_pred EEEEeCCCcEEEEECCCEEEEEc-CCCCCceECccCCcccccceeeeEEcCC-cEEEeC-CCceE--EEECCCCCCCeEc
Confidence 3444 455666677776653321 122 122211 11112345778888743 344444 44543 22222 2222222
Q ss_pred e---cCC-CCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEE-EEC
Q psy10114 594 V---GHT-ARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV-WNL 668 (819)
Q Consensus 594 ~---gHs-~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~I-WDl 668 (819)
. ... ......+.+++.+..++..|.|..-+-..... ......-...+.++.+.+++..++++ ..|.+.. +|
T Consensus 125 ~~~~~~~~~~~~i~~~~~~~~~~~g~~G~i~~S~DgG~tW--~~~~~~~~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~- 200 (334)
T PRK13684 125 PLSEKLPGSPYLITALGPGTAEMATNVGAIYRTTDGGKNW--EALVEDAAGVVRNLRRSPDGKYVAVS-SRGNFYSTWE- 200 (334)
T ss_pred cCCcCCCCCceEEEEECCCcceeeeccceEEEECCCCCCc--eeCcCCCcceEEEEEECCCCeEEEEe-CCceEEEEcC-
Confidence 1 111 11222233444344445555554322222121 12222234568889999988766554 4455543 22
Q ss_pred CCCceeE-EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-----CCCeEEEEEccCCCEEEE
Q psy10114 669 HSMSPLQ-TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-----GSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 669 ~t~~~i~-t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-----~s~V~sLafSpdg~~Las 742 (819)
..++.-. ........+.++.+.+++..+++ | ..|.+++=....|+.-..... ...+..+.+.+++..+++
T Consensus 201 ~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~v-g---~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~ 276 (334)
T PRK13684 201 PGQTAWTPHQRNSSRRLQSMGFQPDGNLWML-A---RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAG 276 (334)
T ss_pred CCCCeEEEeeCCCcccceeeeEcCCCCEEEE-e---cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEE
Confidence 1222111 12234567899999999875444 4 457665433444443332221 234788899988776655
Q ss_pred EEecCCCeEEEEECCCCcEEEEEe---cCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLT---GHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~---gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
| .+|.+. .....++.-.... +-......+.|..+++.++ .+..|.|--|+
T Consensus 277 --G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~ 329 (334)
T PRK13684 277 --G-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYV 329 (334)
T ss_pred --c-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEec
Confidence 3 456554 3444444333332 2223577788776666655 55678887765
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=93.80 E-value=3 Score=49.35 Aligned_cols=169 Identities=17% Similarity=0.308 Sum_probs=98.1
Q ss_pred CCCeEEEEEcCCCCEEEEEe---cCceEEEeecCCceEEEEEecCCCCeEEEEeC------CceeeeccCCCeEEEEECC
Q psy10114 555 GNSVTSVAWNERGNLVAVGT---HHGYVQVWDVSVAKQVHKLVGHTARVGALAWN------GDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs---~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn------g~~LaSGS~DGtI~IWDi~ 625 (819)
-.++..++|. ||+.++-.. .+|.+++=| .+.+.. -..|..++|. ...|.+....+.|.+|.+.
T Consensus 19 iHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd---s~viGq----FEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~ 90 (671)
T PF15390_consen 19 IHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD---SKVIGQ----FEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLC 90 (671)
T ss_pred hccccceEec-CCCEEEEEeeeeeCCccccCC---ccEeec----cceeeeeeecCcccCCCCceEEEeccceEEEEEec
Confidence 3578899997 565554432 234443322 122333 3468889993 2256666677899999986
Q ss_pred CCCccceEEEecccCC--------eEEEEECCCCCEEEEEECCCeEEEEECCCCc--eeEEEecCCCCEEEEEEcCCCCe
Q psy10114 626 TPNSQSERRLVGHRQE--------VCGLKWSPDNQYLASGGNDNRLYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHHHG 695 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~--------VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg~~ 695 (819)
......-+-+.....+ -.+..|+|....|++-..+..=.+.+++... ....+ ...+-|.|.+|.+||..
T Consensus 91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~R 169 (671)
T PF15390_consen 91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQR 169 (671)
T ss_pred cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCE
Confidence 3221111111111111 2467899999988887766554556654332 22233 45788999999999999
Q ss_pred EEEEEccCCCCeEEEEECCCCcee-----EEEcCCCCeEEEEEc
Q psy10114 696 LLASGGGTADRCIRFWNTLTGQPM-----QCVDTGSQVCNLAWS 734 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~tg~~v-----~~l~~~s~V~sLafS 734 (819)
++++-| ..=.-++||-...... -.++.++.|+++.-.
T Consensus 170 LVVAvG--SsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT 211 (671)
T PF15390_consen 170 LVVAVG--SSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEAT 211 (671)
T ss_pred EEEEeC--CeEEEEEecCchhhhhhCCcceeecCCCceEEEEEe
Confidence 988765 3445678885433211 123445566665543
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.77 E-value=3.2 Score=45.51 Aligned_cols=162 Identities=14% Similarity=0.168 Sum_probs=103.4
Q ss_pred EecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC-CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC
Q psy10114 635 LVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH-LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713 (819)
Q Consensus 635 l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h-~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl 713 (819)
..+-...+.++.|+|+.+.|++..+...-.|+=...|+.+.++.-. -..-.+|.+..+|.+.++- ..++.+.++.+
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~d---ER~~~l~~~~v 157 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVD---ERDRALYLFTV 157 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEe---hhcceEEEEEE
Confidence 3455566999999999999999888887777777788888776421 2233567777777644432 26788888776
Q ss_pred CCCceeEEE----------cC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE---EEEEecC-------CCCE
Q psy10114 714 LTGQPMQCV----------DT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ---VAKLTGH-------SYRV 772 (819)
Q Consensus 714 ~tg~~v~~l----------~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~---l~sl~gH-------~~~V 772 (819)
..+..+... .. +.....++|+|....+++ .-+.+-+.||.+..... +.....+ -..|
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~--aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~Dv 235 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFV--AKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDV 235 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEE--EEccCCcEEEEEecCCcccccccccCcccccceEeecc
Confidence 655322211 12 445788999999999888 45666677776653321 1111111 1246
Q ss_pred EEEEEecC-CCEEEEEeCCCcEEEEECCCC
Q psy10114 773 LYLAMSPD-GEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 773 tsLafSpD-G~~LaSGS~DGtIrIWdl~s~ 801 (819)
.++.|.+. +..++-+.+++.+.--|....
T Consensus 236 Sgl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 236 SGLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred ccceecCCCCcEEEEecCCceEEEEecCCC
Confidence 77788764 555666666666666665543
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.73 E-value=1.8 Score=50.77 Aligned_cols=140 Identities=13% Similarity=0.018 Sum_probs=76.8
Q ss_pred eEEEEECC-----CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC--ceEEEeecCCceEE--EEEec
Q psy10114 525 NVLSVGLG-----SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH--GYVQVWDVSVAKQV--HKLVG 595 (819)
Q Consensus 525 ~LLa~g~D-----g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D--GtI~IWDl~tgk~i--~tl~g 595 (819)
.+++||.+ ..+..||..+++...+..+.........+. -+|...++|+.+ ..+..||..+++-. ..+..
T Consensus 274 lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~ 351 (480)
T PHA02790 274 VYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLK 351 (480)
T ss_pred EEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCC
Confidence 34555543 357788988887766555443222222232 357777888754 35788887665432 22222
Q ss_pred CCCCeEEEEeCCceeeeccCCC---eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 596 HTARVGALAWNGDMLSSGSRDR---MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 596 Hs~~V~sLawng~~LaSGS~DG---tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
........+.+|...+.||.++ .+..||.++.+......+.........+. -+|+..+.|+ .+.+||.++.
T Consensus 352 ~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~--~~~~IYv~GG---~~e~ydp~~~ 425 (480)
T PHA02790 352 PRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALV--FGRRLFLVGR---NAEFYCESSN 425 (480)
T ss_pred CCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEE--ECCEEEEECC---ceEEecCCCC
Confidence 2223344555888888888654 46788887765433222221112222222 2466666663 4677887654
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.2 Score=39.95 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=30.0
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
...|.+++|+|..++||.|+.||.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 457999999999999999999999999998 4443
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.18 E-value=18 Score=44.70 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=57.0
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCC-ceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEE
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-AKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR 634 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-gk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~ 634 (819)
-.|..|..+++|+++|..|..| |.|-.+.. ...-..+.+-...|.|=.+ .+.. . ..
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~-----------------~v~~----~-~~ 141 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTV-----------------PVDE----R-FF 141 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEE-----------------Eech----h-hc
Confidence 4688999999999999988876 44555432 1111222222233332222 1111 0 01
Q ss_pred EecccCCeEEEEECCC---CCEEEEEECCCeEEEEECCCC
Q psy10114 635 LVGHRQEVCGLKWSPD---NQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 635 l~gH~~~VtsLafSpd---g~~LaSGS~DGtI~IWDl~t~ 671 (819)
...+...|..+.|+|. +..|++-+.|+++++||+...
T Consensus 142 ~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 142 TSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred cCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 1233456788899985 579999999999999999654
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=93.11 E-value=17 Score=40.32 Aligned_cols=215 Identities=15% Similarity=0.187 Sum_probs=124.5
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecC------Cc-eEEEEEec-----CCCCeEEEEeCC--------------cee
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVS------VA-KQVHKLVG-----HTARVGALAWNG--------------DML 610 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~------tg-k~i~tl~g-----Hs~~V~sLawng--------------~~L 610 (819)
.-+.|+++|.+..-++....+...+||.. .. ..+-++.. ..+..+.+.||+ ..+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 34679999988777777778899999986 12 22333331 234567777741 135
Q ss_pred eeccCCCeEEEEECCCCCc---cceEEEec-ccCC-eEEEEECC--CCCEE-EEEECCCeEEEEECCCCcee--EEEecC
Q psy10114 611 SSGSRDRMILQRDVRTPNS---QSERRLVG-HRQE-VCGLKWSP--DNQYL-ASGGNDNRLYVWNLHSMSPL--QTYTEH 680 (819)
Q Consensus 611 aSGS~DGtI~IWDi~t~~~---~~v~~l~g-H~~~-VtsLafSp--dg~~L-aSGS~DGtI~IWDl~t~~~i--~t~~~h 680 (819)
+.+++||+|.-|....... .....+.. .... -.++++.. .+.+| ++--..++|.|+|-.-.+.. ..|...
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP 183 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP 183 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence 7788999999998644332 11122221 1122 34555543 24444 44445788999986433211 011111
Q ss_pred -----CC--CEEEEEEcCCCCeEEEEEc-----------cCCCCeEEEEECCCCceeEEEcCCC---CeEEEEEcc----
Q psy10114 681 -----LA--AVKAIAWSPHHHGLLASGG-----------GTADRCIRFWNTLTGQPMQCVDTGS---QVCNLAWSK---- 735 (819)
Q Consensus 681 -----~~--~VtsLafSPdg~~LLaSGg-----------Gs~DgtIrIWDl~tg~~v~~l~~~s---~V~sLafSp---- 735 (819)
-+ .|..+ +..++++-. |.--|.|-++|+. |+.++.+..+. ..+.++..|
T Consensus 184 ~iPagyAPFnIqni-----g~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG 257 (336)
T TIGR03118 184 ALPAGYAPFNVQNL-----GGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFG 257 (336)
T ss_pred CCCCCCCCcceEEE-----CCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhC
Confidence 00 11111 112222211 1234789999974 77777775543 346677655
Q ss_pred --CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC------CEEEEEEec
Q psy10114 736 --HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY------RVLYLAMSP 779 (819)
Q Consensus 736 --dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~------~VtsLafSp 779 (819)
.+..|+- ...||+|..||..+++.+..+....+ ..+.++|..
T Consensus 258 ~~sg~lLVG--NFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 258 SLSGALLVG--NFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCCCCeEEe--ecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 4566665 66799999999999998888876543 356777755
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.69 Score=53.76 Aligned_cols=140 Identities=14% Similarity=0.206 Sum_probs=94.5
Q ss_pred EEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc----cCCCCeEEEEECCCCce--e-----EEE
Q psy10114 654 LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG----GTADRCIRFWNTLTGQP--M-----QCV 722 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg----Gs~DgtIrIWDl~tg~~--v-----~~l 722 (819)
+.++.....++-.|++.|+.+..++-+.. |.-+.+.|+.+.-=.+.. |-.|..|.-||.+-... + +.+
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 34455567789999999999999887766 677777776542111100 33688999999884322 1 122
Q ss_pred cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEE-EEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV-AKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l-~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
..+....|.+-..+| ++++ |+.+|.|++||- .+... ..+.+-..+|..+..+.||++|+.. .+..+.+-++.
T Consensus 428 ~~k~nFsc~aTT~sG-~Ivv--gS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~T-c~tyLlLi~t~ 500 (644)
T KOG2395|consen 428 STKNNFSCFATTESG-YIVV--GSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILAT-CKTYLLLIDTL 500 (644)
T ss_pred ccccccceeeecCCc-eEEE--eecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEe-cccEEEEEEEe
Confidence 334556666655555 4555 789999999997 44443 4466778899999999999988754 45566666653
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=93.03 E-value=22 Score=43.86 Aligned_cols=178 Identities=9% Similarity=0.023 Sum_probs=96.1
Q ss_pred CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC------CeEEEEECCCC--ceeEEEecCCCCEE-
Q psy10114 615 RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND------NRLYVWNLHSM--SPLQTYTEHLAAVK- 685 (819)
Q Consensus 615 ~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D------GtI~IWDl~t~--~~i~t~~~h~~~Vt- 685 (819)
..-.|++.|+.++... ...+.+- -..++|++|++.|+.+..+ ..|+.+++.++ +....+.+......
T Consensus 151 E~~~l~v~d~~tg~~l-~~~i~~~---~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~ 226 (686)
T PRK10115 151 RQYGIRFRNLETGNWY-PELLDNV---EPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYV 226 (686)
T ss_pred EEEEEEEEECCCCCCC-CccccCc---ceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEE
Confidence 3446888888776421 1122211 1458999999877666543 36888888887 33344444333333
Q ss_pred EEEEcCCCCeEEEEEccCCCCeEEEEECC--CCceeEEEcCCCC-eEEEEEccCCCEEEEEEe--cCCCeEEEEECCCCc
Q psy10114 686 AIAWSPHHHGLLASGGGTADRCIRFWNTL--TGQPMQCVDTGSQ-VCNLAWSKHSSELVSTHG--YSQNQILVWKYPTLT 760 (819)
Q Consensus 686 sLafSPdg~~LLaSGgGs~DgtIrIWDl~--tg~~v~~l~~~s~-V~sLafSpdg~~LastsG--ssDg~I~IWDl~s~k 760 (819)
.+..+.+++.+++......++.+.+++.. +++....+..... ...+. ..+..++..+. .....|...++.+..
T Consensus 227 ~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ly~~tn~~~~~~~l~~~~~~~~~ 304 (686)
T PRK10115 227 SLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD--HYQHRFYLRSNRHGKNFGLYRTRVRDEQ 304 (686)
T ss_pred EEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE--eCCCEEEEEEcCCCCCceEEEecCCCcc
Confidence 33345588877766655567889999953 3443323332222 22222 22344444332 223345444554222
Q ss_pred EEEEEecC-C-CCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 761 QVAKLTGH-S-YRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 761 ~l~sl~gH-~-~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
....+..+ . ..+..+.++ .+..+++...+|.-+++-+.
T Consensus 305 ~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 305 QWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQIN 344 (686)
T ss_pred cCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEc
Confidence 22344445 3 367888887 33456666777776665544
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=92.37 E-value=1.7 Score=54.51 Aligned_cols=142 Identities=13% Similarity=0.113 Sum_probs=90.7
Q ss_pred CeEEEEEcCCCCEEEEEe--cCceEEEeecCCceE-----EEEEec------CCCCeEEEEeCCc---eeeeccCCCeEE
Q psy10114 557 SVTSVAWNERGNLVAVGT--HHGYVQVWDVSVAKQ-----VHKLVG------HTARVGALAWNGD---MLSSGSRDRMIL 620 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs--~DGtI~IWDl~tgk~-----i~tl~g------Hs~~V~sLawng~---~LaSGS~DGtI~ 620 (819)
.+..+...+|+...++.. .+-.|..+|+++-.. .+-+.. ...-..++.|+.. ..++...|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 455555666766554433 334788899865321 111221 2334557778644 677888899998
Q ss_pred EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec----CCCCEEEEEEcCCCCeE
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE----HLAAVKAIAWSPHHHGL 696 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~----h~~~VtsLafSPdg~~L 696 (819)
+..+...... +.. ..-....++++|+|.|++++.|-+.|++.-|... ++....+.+ ....|.+|+|-....++
T Consensus 182 V~~~~~~~~~-v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 182 VKSTKQLAQN-VTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred hhhhhhhhhh-hcc-cCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEE
Confidence 8877653321 111 2234578999999999999999999999888753 232222221 25789999999888877
Q ss_pred EEEEc
Q psy10114 697 LASGG 701 (819)
Q Consensus 697 LaSGg 701 (819)
++-+.
T Consensus 259 vvy~n 263 (1405)
T KOG3630|consen 259 VVYGN 263 (1405)
T ss_pred EEecc
Confidence 66554
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.36 E-value=7.5 Score=40.83 Aligned_cols=172 Identities=16% Similarity=0.133 Sum_probs=107.0
Q ss_pred eEEEEEC--CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecCceEEEeecCCceEEEEEecCCCCeE
Q psy10114 525 NVLSVGL--GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVGHTARVG 601 (819)
Q Consensus 525 ~LLa~g~--Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~gHs~~V~ 601 (819)
.+.+.|. .+.|++||+.+++......+.. ..+..=-...-|+.+.. .-.+|.-.++|.++.+++..+. -.+.=+
T Consensus 58 i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~--~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeGW 134 (262)
T COG3823 58 ILESTGLYGFSKIRVSDLTTGQEIFSEKLAP--DTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEGW 134 (262)
T ss_pred EEEeccccccceeEEEeccCceEEEEeecCC--ccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcce
Confidence 3444443 3569999999998766555541 11211111122343333 3457888889998888877665 234456
Q ss_pred EEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCC---eEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe
Q psy10114 602 ALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE---VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 602 sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~---VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~ 678 (819)
.++-++..|+.++...+++..|.++-.............+ ++.+.|- ||...|-.-.+..|..-|.++|+.+..+.
T Consensus 135 gLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~wid 213 (262)
T COG3823 135 GLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVAWID 213 (262)
T ss_pred eeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEEEEE
Confidence 7777888888888888888888776443222222222222 3334443 66666666666777777888887665543
Q ss_pred ------------cCCCCEEEEEEcCCCCeEEEEE
Q psy10114 679 ------------EHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 679 ------------~h~~~VtsLafSPdg~~LLaSG 700 (819)
.+....+.|++.|++..++.+|
T Consensus 214 lS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 214 LSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred ccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 2345677899999998888886
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=92.35 E-value=2.7 Score=45.09 Aligned_cols=113 Identities=20% Similarity=0.225 Sum_probs=71.9
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEE-CCCCcE
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWK-YPTLTQ 761 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWD-l~s~k~ 761 (819)
.+.+.++++++..+++...+.....+.++. .+........+..+....|++++...++ ...+...+++. ..+++.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~--~~~~~~~~~~g~~l~~PS~d~~g~~W~v--~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGP--AGGPVRPVLTGGSLTRPSWDPDGWVWTV--DDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEc--CCCcceeeccCCccccccccCCCCEEEE--EcCCCceEEEEecCCCcc
Confidence 688999999999887776211344555554 4444444445668889999999777666 34455555553 333322
Q ss_pred E-EEEec--CCCCEEEEEEecCCCEEEEEe---CCCcEEEEECC
Q psy10114 762 V-AKLTG--HSYRVLYLAMSPDGEAIVTGA---GDETLRFWNVF 799 (819)
Q Consensus 762 l-~sl~g--H~~~VtsLafSpDG~~LaSGS---~DGtIrIWdl~ 799 (819)
. ..+.. -.+.|+.+.+||||..++... .++.|.+=-+.
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 2 12221 122899999999999887655 45777776654
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=91.85 E-value=8.1 Score=45.95 Aligned_cols=147 Identities=19% Similarity=0.312 Sum_probs=87.1
Q ss_pred CCeEEEEe-CCceeeecc---CCCeEEEEECCCCCccceEEEecccCCeEEEEECCC----CCEEEEEECCCeEEEEECC
Q psy10114 598 ARVGALAW-NGDMLSSGS---RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD----NQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 598 ~~V~sLaw-ng~~LaSGS---~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd----g~~LaSGS~DGtI~IWDl~ 669 (819)
.++..++| ||+.++-.. .+|.+++ ++ ....|.-..|.++.|.|- ...+++......|.||.+.
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kf-----Gd----s~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~ 90 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKF-----GD----SKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLC 90 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCcccc-----CC----ccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEec
Confidence 46778999 777544321 1222222 11 122344457999999984 3245555667899999985
Q ss_pred C-----CceeEEEec-C--CC--CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC--ceeEEEcCCCCeEEEEEccCC
Q psy10114 670 S-----MSPLQTYTE-H--LA--AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG--QPMQCVDTGSQVCNLAWSKHS 737 (819)
Q Consensus 670 t-----~~~i~t~~~-h--~~--~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg--~~v~~l~~~s~V~sLafSpdg 737 (819)
. ++.+..... . .- --....|+|....+.+-.+ .|-. .+.+++.. +....++..+-|.+.+|.+||
T Consensus 91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~--~dvS-V~~sV~~d~srVkaDi~~~G~IhCACWT~DG 167 (671)
T PF15390_consen 91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA--RDVS-VLPSVHCDSSRVKADIKTSGLIHCACWTKDG 167 (671)
T ss_pred cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec--Ccee-EeeeeeeCCceEEEeccCCceEEEEEecCcC
Confidence 2 222211111 1 11 1235679999886655442 3332 35555543 334455677889999999999
Q ss_pred CEEEEEEecCCCeEEEEECC
Q psy10114 738 SELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 738 ~~LastsGssDg~I~IWDl~ 757 (819)
+.++++.|+ .=.-++||-.
T Consensus 168 ~RLVVAvGS-sLHSyiWd~~ 186 (671)
T PF15390_consen 168 QRLVVAVGS-SLHSYIWDSA 186 (671)
T ss_pred CEEEEEeCC-eEEEEEecCc
Confidence 999997653 4456788854
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=91.83 E-value=3.5 Score=49.82 Aligned_cols=118 Identities=14% Similarity=0.279 Sum_probs=74.4
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe----CCceeeeccCCCeEEEEE
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW----NGDMLSSGSRDRMILQRD 623 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw----ng~~LaSGS~DGtI~IWD 623 (819)
..+...-...+-+.-+.-++..++.+....+.|||...+.....-. ...+.|.++.| +++.+++.|..+.|.++.
T Consensus 23 ~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 23 STFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred EEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 3343334445555555555555555555689999998887443332 45788999999 577777777778887774
Q ss_pred CC-----C--CCccceE--EEeccc-CCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 624 VR-----T--PNSQSER--RLVGHR-QEVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 624 i~-----t--~~~~~v~--~l~gH~-~~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
-. . +....+. .+..++ .+|.+..|.++|..++.+| +.+.|+|-
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 31 1 1111222 233444 6789999999997655443 57888875
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=91.83 E-value=3.3 Score=48.63 Aligned_cols=134 Identities=12% Similarity=0.001 Sum_probs=73.4
Q ss_pred EecCCeEEEEECC--CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc---eEEEeecCCceEEE--E
Q psy10114 520 DWSSQNVLSVGLG--SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG---YVQVWDVSVAKQVH--K 592 (819)
Q Consensus 520 dwS~~~LLa~g~D--g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG---tI~IWDl~tgk~i~--t 592 (819)
..++...+.||.+ ..+..||..+++...+..+.........++ -+|+..+.|+.++ .+..||.++++-.. .
T Consensus 316 ~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~ 393 (480)
T PHA02790 316 PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQWQFGPS 393 (480)
T ss_pred EECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCEEEeCCC
Confidence 3345555566643 458889988877766555543222222222 3577778887653 47788887654322 1
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D 660 (819)
+.........++.++.+.+.|+ .+.+||.++++......+.........+.. +|+..+.||.+
T Consensus 394 m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~ 456 (480)
T PHA02790 394 TYYPHYKSCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFY 456 (480)
T ss_pred CCCccccceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCccccEEEEE--CCEEEEECCcC
Confidence 2112222334456777777774 467899887765433333222222222222 56777777754
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=91.73 E-value=31 Score=40.08 Aligned_cols=266 Identities=13% Similarity=0.143 Sum_probs=147.1
Q ss_pred CeEEEEECCCeEEEEEcCCCceE---EEEeccCCCCCeEEEEEcC-----CCCEEEEEecCceEEEeecCC--ce-----
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVT---RLCDLSADGNSVTSVAWNE-----RGNLVAVGTHHGYVQVWDVSV--AK----- 588 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~---~l~~l~~h~~~VtsLafSp-----dG~~LAsGs~DGtI~IWDl~t--gk----- 588 (819)
+.++.|+.+|.++|++...++.. .+.+. .-+.+|-.++.-+ +...||+ -.-..+.||.+.. |.
T Consensus 38 d~IivGS~~G~LrIy~P~~~~~~~~~lllE~-~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 38 DKIIVGSYSGILRIYDPSGNEFQPEDLLLET-QLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred cEEEEeccccEEEEEccCCCCCCCccEEEEE-ecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccCc
Confidence 57999999999999998655422 11121 1246787777542 2345655 3445788887731 11
Q ss_pred --EEEEEecCCCC--eEEEE---e---C-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE
Q psy10114 589 --QVHKLVGHTAR--VGALA---W---N-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG 657 (819)
Q Consensus 589 --~i~tl~gHs~~--V~sLa---w---n-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG 657 (819)
.+..+..|.-. ...++ | . .+.+++-+.||.+.+++-+.-. ....+.+ .--...+.+.+..+.++++
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~--f~~~lp~-~llPgPl~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA--FSRFLPD-FLLPGPLCYCPRTDSFVTA 192 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE--EEEEcCC-CCCCcCeEEeecCCEEEEe
Confidence 22333333322 22222 2 2 3689999999999999976532 1122222 2223456788888889999
Q ss_pred ECCCeEEEEECCC--------------------Cc---eeEEEec--CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE
Q psy10114 658 GNDNRLYVWNLHS--------------------MS---PLQTYTE--HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 658 S~DGtI~IWDl~t--------------------~~---~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD 712 (819)
+.+..+.-|..+. ++ +-.++.- ..-.|..+.++.....+++-| .+++.+.+
T Consensus 193 sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLg----er~Lf~l~ 268 (418)
T PF14727_consen 193 SSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLG----ERSLFCLK 268 (418)
T ss_pred cCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEe----cceEEEEc
Confidence 8888888876421 00 1111111 111233444444555566665 57777777
Q ss_pred CCCCceeEEEcCCCCeEEE-EEcc----CCC---EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe---cCC
Q psy10114 713 TLTGQPMQCVDTGSQVCNL-AWSK----HSS---ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMS---PDG 781 (819)
Q Consensus 713 l~tg~~v~~l~~~s~V~sL-afSp----dg~---~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafS---pDG 781 (819)
- +|......+.+....++ .+.. +++ .+++ ++.++.+.||.-. +.+...+....+| ++... .-.
T Consensus 269 ~-~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV--~t~t~~LlVy~d~--~L~WsA~l~~~PV-al~v~~~~~~~ 342 (418)
T PF14727_consen 269 D-NGSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLV--GTHTGTLLVYEDT--TLVWSAQLPHVPV-ALSVANFNGLK 342 (418)
T ss_pred C-CCeEEEEEecCCceeeEEEEEeecccCCCCceEEEE--EecCCeEEEEeCC--eEEEecCCCCCCE-EEEecccCCCC
Confidence 5 45554444444332222 2221 222 2444 6789999998743 3333333222332 33332 234
Q ss_pred CEEEEEeCCCcEEEEECCCCcee
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
..|++-+.||.+.+-=+.+....
T Consensus 343 G~IV~Ls~~G~L~v~YLGTdPs~ 365 (418)
T PF14727_consen 343 GLIVSLSDEGQLSVSYLGTDPSL 365 (418)
T ss_pred ceEEEEcCCCcEEEEEeCCCCcc
Confidence 57888899999998877765543
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=91.50 E-value=7.7 Score=41.42 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=87.0
Q ss_pred CCCeEEEEEcCCCCEEEEEec-C---------ceEEEeecCCceEEEEEecCCCCeEEEEeCCc---eeeeccCCCeEEE
Q psy10114 555 GNSVTSVAWNERGNLVAVGTH-H---------GYVQVWDVSVAKQVHKLVGHTARVGALAWNGD---MLSSGSRDRMILQ 621 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~-D---------GtI~IWDl~tgk~i~tl~gHs~~V~sLawng~---~LaSGS~DGtI~I 621 (819)
....+.-..+|+|++. .|.. | |.++.|-. +..+..+.+.-+--+.++|+.+ ..+.-+.+-+|.-
T Consensus 108 knR~NDgkvdP~Gryy-~GtMad~~~~le~~~g~Ly~~~~--~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a 184 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYY-GGTMADFGDDLEPIGGELYSWLA--GHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA 184 (310)
T ss_pred hcccccCccCCCCcee-eeeeccccccccccccEEEEecc--CCCceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence 3456667788999984 4432 2 33333322 1122222222223346788533 4556677778877
Q ss_pred EEC--CCCCcc---ceEEEec----ccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCC
Q psy10114 622 RDV--RTPNSQ---SERRLVG----HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH 692 (819)
Q Consensus 622 WDi--~t~~~~---~v~~l~g----H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPd 692 (819)
||. .++... .+..+.. ....--+++...+|++.++.-+.++|.-.|..+|+.+.+++-....|++++|-..
T Consensus 185 ~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 185 YDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred eecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence 874 333321 1111211 1223345666778999999999999999999999999999988999999999754
Q ss_pred C-CeEEEEE
Q psy10114 693 H-HGLLASG 700 (819)
Q Consensus 693 g-~~LLaSG 700 (819)
+ ..+.+++
T Consensus 265 n~d~~yvT~ 273 (310)
T KOG4499|consen 265 NLDILYVTT 273 (310)
T ss_pred CccEEEEEe
Confidence 3 3334443
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.49 E-value=26 Score=38.74 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=99.4
Q ss_pred CCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc---
Q psy10114 596 HTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS--- 672 (819)
Q Consensus 596 Hs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~--- 672 (819)
-.+-+..+.+++++...+..+.-+++.|+.+++.........-.+--.++.. .|++..++..|.-+.+.|+.+.+
T Consensus 85 ~~~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~ 162 (370)
T COG5276 85 ARDLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQ 162 (370)
T ss_pred hhhhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCce
Confidence 3455677888999999999999999999999875433222222233344444 58888888877778888987653
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc---eeEEEcCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ---PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~---~v~~l~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
...++......-..++.|.+ +-.++. .|+-+.+-|+.+.. .+...+.+..+.++..+++..+++. . +.
T Consensus 163 lagrya~~~~d~~~v~ISGn--~AYvA~---~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vv--y--~e 233 (370)
T COG5276 163 LAGRYALPGGDTHDVAISGN--YAYVAW---RDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVV--Y--DE 233 (370)
T ss_pred eeeeeccCCCCceeEEEecC--eEEEEE---eCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEE--c--cc
Confidence 23334333444455666644 333333 68888999987643 3445566667888888888777766 2 34
Q ss_pred eEEEEECCCCc
Q psy10114 750 QILVWKYPTLT 760 (819)
Q Consensus 750 ~I~IWDl~s~k 760 (819)
.+.+-|..+.+
T Consensus 234 gvlivd~s~~s 244 (370)
T COG5276 234 GVLIVDVSGPS 244 (370)
T ss_pred ceEEEecCCCC
Confidence 46666665444
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=91.47 E-value=4.3 Score=49.12 Aligned_cols=108 Identities=18% Similarity=0.330 Sum_probs=72.4
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe-cCCCCEEEEEEc--CCCCeEEEEEccCCCCeEEEEECC----
Q psy10114 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWS--PHHHGLLASGGGTADRCIRFWNTL---- 714 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~-~h~~~VtsLafS--Pdg~~LLaSGgGs~DgtIrIWDl~---- 714 (819)
..-+.-|.-++..++.+....+.|||.+.+.....-. ...+.|.++.|. |+++.+++.| ..+.|.++--.
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVG---f~~~v~l~~Q~R~dy 108 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVG---FPHHVLLYTQLRYDY 108 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEE---cCcEEEEEEccchhh
Confidence 3334444444444444444579999998887443332 457889999984 7889899988 68888888542
Q ss_pred -C----CceeEEEc----CCCCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 715 -T----GQPMQCVD----TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 715 -t----g~~v~~l~----~~s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
+ -..++.++ +..+|.+..|.++|..++.+ .+++.|+|-
T Consensus 109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s----GNqlfv~dk 155 (631)
T PF12234_consen 109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS----GNQLFVFDK 155 (631)
T ss_pred hcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe----CCEEEEECC
Confidence 1 12334432 34789999999999887763 478888874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=91.41 E-value=16 Score=40.19 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=56.6
Q ss_pred CCCEEEEEecC-----ceEEEeecCCceE---EEEEec---CCCCeEEEEeCCceeeeccC-----CCeEEEEECCCCCc
Q psy10114 566 RGNLVAVGTHH-----GYVQVWDVSVAKQ---VHKLVG---HTARVGALAWNGDMLSSGSR-----DRMILQRDVRTPNS 629 (819)
Q Consensus 566 dG~~LAsGs~D-----GtI~IWDl~tgk~---i~tl~g---Hs~~V~sLawng~~LaSGS~-----DGtI~IWDi~t~~~ 629 (819)
++.+++.|+.+ ..+..+|+.+.+. ...+.. ......+...++.+.+.|+. ...+..||+.+.+.
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W 151 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEW 151 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCe
Confidence 46677777754 3566777766553 122221 11122334446777777764 24688889887765
Q ss_pred cceEEEecccCCeEEEEECCCCCEEEEEECCC----eEEEEECCCCc
Q psy10114 630 QSERRLVGHRQEVCGLKWSPDNQYLASGGNDN----RLYVWNLHSMS 672 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG----tI~IWDl~t~~ 672 (819)
..+..+.... .....+...+++..+.|+.++ .+.+||.++.+
T Consensus 152 ~~~~~~p~~~-r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 152 FELPDFPGEP-RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred eECCCCCCCC-CCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 4332222111 111122233577778887664 35678887654
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.57 Score=49.36 Aligned_cols=96 Identities=19% Similarity=0.178 Sum_probs=66.7
Q ss_pred CCCCeEEEEECCC-CceeEEEcCC-CCe-EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC-CCEEEEEEe
Q psy10114 703 TADRCIRFWNTLT-GQPMQCVDTG-SQV-CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS-YRVLYLAMS 778 (819)
Q Consensus 703 s~DgtIrIWDl~t-g~~v~~l~~~-s~V-~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~-~~VtsLafS 778 (819)
+.||.|.+|+... |.....+... ..+ +.+.--.++....+ +..+|.|+.|++.-.+.+.....|. .++..+..+
T Consensus 77 ~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~--~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv 154 (238)
T KOG2444|consen 77 TSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCV--GAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVV 154 (238)
T ss_pred cccceEEEecCCccchHHHhhhcccccceeccccccccceeEE--eccCCceeeeccccCceeeeeccccCCCcceeEEe
Confidence 4899999998762 1111111111 222 22222223334444 7789999999999888888888887 778888888
Q ss_pred cCCCEEEEE--eCCCcEEEEECCC
Q psy10114 779 PDGEAIVTG--AGDETLRFWNVFS 800 (819)
Q Consensus 779 pDG~~LaSG--S~DGtIrIWdl~s 800 (819)
..+++++.+ |.|..++.|++..
T Consensus 155 ~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 155 GSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cCCceEEeeccccchhhhhcchhh
Confidence 888899888 8999999999865
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.7 Score=36.90 Aligned_cols=34 Identities=24% Similarity=0.516 Sum_probs=29.8
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce
Q psy10114 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP 673 (819)
Q Consensus 639 ~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~ 673 (819)
...|..++|+|....+|.|+.||.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 456899999999999999999999999998 5443
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=90.57 E-value=2.6 Score=48.98 Aligned_cols=143 Identities=15% Similarity=0.203 Sum_probs=94.3
Q ss_pred cCCCCEEEE-EecCceEEEeecCCceEEEEEecCCCCeEEEEeC---------CceeeeccCCCeEEEEECCCCCccceE
Q psy10114 564 NERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---------GDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 564 SpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---------g~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
..|.++|.. |.....+.-.|++.|+.+.....|..-| +.++ ...-++|-.+..|.-.|.+..... .
T Consensus 476 ~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddvv--Vqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNK--i 551 (776)
T COG5167 476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDVV--VQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNK--I 551 (776)
T ss_pred cCCcceEEecCCCcccceeeecccceeeeEeecCCcce--eecCCchhHHhcCccceEEeecccceEEecccccCCc--e
Confidence 344455543 4555667778999999999998877663 3342 223445556666666677654422 1
Q ss_pred EEecccCCeEEEEECC----CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 634 RLVGHRQEVCGLKWSP----DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 634 ~l~gH~~~VtsLafSp----dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
......+-++.-.||. ...++|.||..|.|++||.-..+....+.+-..+|..+..+.+|++++++| ...+.
T Consensus 552 ~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC----k~yll 627 (776)
T COG5167 552 KVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC----KNYLL 627 (776)
T ss_pred eeeeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee----cceEE
Confidence 1122222233333332 456899999999999999755555555666778999999999999999987 56777
Q ss_pred EEECC
Q psy10114 710 FWNTL 714 (819)
Q Consensus 710 IWDl~ 714 (819)
+-|++
T Consensus 628 L~d~~ 632 (776)
T COG5167 628 LTDVP 632 (776)
T ss_pred EEecc
Confidence 77765
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=90.24 E-value=9.9 Score=42.94 Aligned_cols=144 Identities=8% Similarity=0.099 Sum_probs=81.5
Q ss_pred CCeEEEEECCCCCEEEEEE-----------CCC-eEEEEECCC--Cc--eeEEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 640 QEVCGLKWSPDNQYLASGG-----------NDN-RLYVWNLHS--MS--PLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS-----------~DG-tI~IWDl~t--~~--~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
.....|+|.++|+.+++-. ..+ .|.+++-.+ ++ ....+.........+++.+++ ++++.
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~--- 88 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVAT--- 88 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeC---
Confidence 3457889999999777643 223 777776543 32 234444444556889999888 55543
Q ss_pred CCCeEEEEECCCC-----ce--e-EEEcC-----CCCeEEEEEccCCCEEEEEEecC------------------CCeEE
Q psy10114 704 ADRCIRFWNTLTG-----QP--M-QCVDT-----GSQVCNLAWSKHSSELVSTHGYS------------------QNQIL 752 (819)
Q Consensus 704 ~DgtIrIWDl~tg-----~~--v-~~l~~-----~s~V~sLafSpdg~~LastsGss------------------Dg~I~ 752 (819)
.+...++.|.... +. + ..+.. ......++|.|||...++. |.. .+.|.
T Consensus 89 ~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~-G~~~~~~~~~~~~~~~~~~~~~g~i~ 167 (367)
T TIGR02604 89 PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNH-GNTLASKVTRPGTSDESRQGLGGGLF 167 (367)
T ss_pred CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEec-ccCCCceeccCCCccCcccccCceEE
Confidence 3333334455321 11 1 11222 2347789999999866654 321 13455
Q ss_pred EEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 753 IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
-++..+++ ...+.........++|+++|+++++-..+
T Consensus 168 r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 168 RYNPDGGK-LRVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred EEecCCCe-EEEEecCcCCCccceECCCCCEEEEccCC
Confidence 55554433 22232222335789999999988764433
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=89.37 E-value=35 Score=38.62 Aligned_cols=58 Identities=12% Similarity=0.006 Sum_probs=27.6
Q ss_pred EEeCCceeeeccCC-----------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC
Q psy10114 603 LAWNGDMLSSGSRD-----------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660 (819)
Q Consensus 603 Lawng~~LaSGS~D-----------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D 660 (819)
+..++.+.+.|+.+ ..+..||..+.+.............-.+....-+++..+.|+.+
T Consensus 81 v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 81 AFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred EEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 34466666666643 24677888775543222110111000111111367777777754
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=89.07 E-value=8.7 Score=49.21 Aligned_cols=227 Identities=13% Similarity=0.094 Sum_probs=102.6
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC-CeEEEEe--CCceeeeccCCCeEEEEECCCCCccce
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA-RVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~-~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v 632 (819)
.....++|++...++|.|+.+|.|+++-...-+.......... .+..+.+ ......+...+..+.+|......
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~---- 111 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKT---- 111 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeecccccc----
Confidence 3556789999999999999999999997654333222211111 1122222 12233333445555566544322
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE-EEecCCCCEEEE-EEcCCC-CeEEEEEccCCCCeEE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ-TYTEHLAAVKAI-AWSPHH-HGLLASGGGTADRCIR 709 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~-t~~~h~~~VtsL-afSPdg-~~LLaSGgGs~DgtIr 709 (819)
...+.+.+++..-.+--.. +.| ..+.++++|..-..... .+.+-.+..... .+.+.. ...... .|-.-.
T Consensus 112 --~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~----~~~~~~ 183 (993)
T KOG1983|consen 112 --GVFLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLV----IDLDTV 183 (993)
T ss_pred --eeecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccc----cccccc
Confidence 1122333443333222223 445 77888888864322110 000000000000 000000 000000 010111
Q ss_pred EEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 710 FWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 710 IWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
.+-+.... .........+.+..+........ ++..+.+.+|+......... ..+.....+.++..++++..
T Consensus 184 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~h~ 254 (993)
T KOG1983|consen 184 LISLPDAY-LGLSLIEYESLQVLYYSPTKILI---GFNRGLVVIKDRASKYVQSA-----YLPNGQLESRDGSHFVSYHT 254 (993)
T ss_pred eeeccccc-ccccccccccceeeeecCCCcce---eeeeeeeeehhcccccchhh-----cccccccCccCCceEEEEEe
Confidence 11111101 01111223344444433333333 23445555555433222222 22222222889999999999
Q ss_pred CCcEEEEECCCCce
Q psy10114 790 DETLRFWNVFSKVR 803 (819)
Q Consensus 790 DGtIrIWdl~s~~~ 803 (819)
||.+.+||+..++.
T Consensus 255 Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 255 DGSYAFWDVSSGKL 268 (993)
T ss_pred cCCEEeeecCCCce
Confidence 99999999999865
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=88.90 E-value=1.9 Score=54.09 Aligned_cols=140 Identities=17% Similarity=0.183 Sum_probs=90.6
Q ss_pred eEEEEECCCCCEEEEE--ECCCeEEEEECCCCcee-----EEEe------cCCCCEEEEEEcCCCCeEEEEEccCCCCeE
Q psy10114 642 VCGLKWSPDNQYLASG--GNDNRLYVWNLHSMSPL-----QTYT------EHLAAVKAIAWSPHHHGLLASGGGTADRCI 708 (819)
Q Consensus 642 VtsLafSpdg~~LaSG--S~DGtI~IWDl~t~~~i-----~t~~------~h~~~VtsLafSPdg~~LLaSGgGs~DgtI 708 (819)
+..+...+|+...++. +++-.|..||+++-..- .-+. .......++.|.|.-....+... .|+.|
T Consensus 103 i~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l--~dlsl 180 (1405)
T KOG3630|consen 103 IVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDL--SDLSL 180 (1405)
T ss_pred ceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhc--cccch
Confidence 4445555665544433 34447889998653211 1111 22344567888887654444443 78999
Q ss_pred EEEECCCC-ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec----CCCCEEEEEEecCCCE
Q psy10114 709 RFWNTLTG-QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG----HSYRVLYLAMSPDGEA 783 (819)
Q Consensus 709 rIWDl~tg-~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g----H~~~VtsLafSpDG~~ 783 (819)
++..+... ..+..+......++++|+|.|+.+++ |...|.+.-|.. +++....+.+ ...+|.+++|-....+
T Consensus 181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~i--G~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~ef 257 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFI--GRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQEF 257 (1405)
T ss_pred hhhhhhhhhhhhcccCcccceeeEEeccccceeeE--ecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEecceeE
Confidence 88876543 23344566778999999999999999 999999988863 4444444432 1478999999877777
Q ss_pred EEE
Q psy10114 784 IVT 786 (819)
Q Consensus 784 LaS 786 (819)
+++
T Consensus 258 lvv 260 (1405)
T KOG3630|consen 258 LVV 260 (1405)
T ss_pred EEE
Confidence 665
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=88.71 E-value=43 Score=37.09 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=29.5
Q ss_pred EEEeCCceeeeccCC-----------CeEEEEECCCCCccceEEE-ecccCCeEEEEECCCCCEEEEEECC
Q psy10114 602 ALAWNGDMLSSGSRD-----------RMILQRDVRTPNSQSERRL-VGHRQEVCGLKWSPDNQYLASGGND 660 (819)
Q Consensus 602 sLawng~~LaSGS~D-----------GtI~IWDi~t~~~~~v~~l-~gH~~~VtsLafSpdg~~LaSGS~D 660 (819)
....++.+.+.|+.+ ..+..||..+......... .........+ ..-+++..+.|+.+
T Consensus 59 ~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~-~~~~g~IYviGG~~ 128 (346)
T TIGR03547 59 AAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGF-SLHNGQAYFTGGVN 128 (346)
T ss_pred EEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEE-EEeCCEEEEEcCcC
Confidence 444477777777653 2467788877654332211 0111111111 12467777887754
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.58 E-value=22 Score=42.40 Aligned_cols=272 Identities=14% Similarity=0.088 Sum_probs=139.7
Q ss_pred CcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 512 dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
.|..+.++-.+-+.-+=++.+..+..+|..+++..++.... ...+|..+.-+.+| .+.+|+.+| |.+.+.+..+...
T Consensus 163 ~d~~V~aLv~D~~g~lWvgT~dGL~~fd~~~gkalql~s~~-~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn 239 (671)
T COG3292 163 KDTPVVALVFDANGRLWVGTPDGLSYFDAGRGKALQLASPP-LDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRASN 239 (671)
T ss_pred cCccceeeeeeccCcEEEecCCcceEEccccceEEEcCCCc-chhhHHHHHHHhcC-cEEEEeccc-eEEEchhhccccc
Confidence 44556666666555455566667888999888876543322 23566666666555 577888888 6777765422211
Q ss_pred EEe-cCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLV-GHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~-gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
... -..+.|..+.-| ...+-.|+..|..+.--.+.+-..+.......-+.|.++....+|. +-+++.++.+++-+..
T Consensus 240 ~~~~lp~~~I~ll~qD~qG~lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv~~~~a~ 318 (671)
T COG3292 240 WGPMLPSGNILLLVQDAQGELWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIVRYLTAD 318 (671)
T ss_pred cCCCCcchheeeeecccCCCEEEeecccceeEecCCCCccccccccCCccccccceeeccCCC-EeeeccCceEEEecch
Confidence 111 123445444444 3366777777665443333221111111111223456666666665 5666666666654432
Q ss_pred CCceeEEEecCCC-CEEEEEEcC--CCCeEEEEEccCCCCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEE
Q psy10114 670 SMSPLQTYTEHLA-AVKAIAWSP--HHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 670 t~~~i~t~~~h~~-~VtsLafSP--dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~Lasts 744 (819)
......+....+ .+...+..| .+..+.. +..-|.+.+-+-.+|..+.... -+..|+.+++..+|+.- .
T Consensus 319 -w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~---~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~~g~lW-l-- 391 (671)
T COG3292 319 -WKRMAVINDSDGGVSQYEAVAPALLSWGVRQ---LNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDSRGRLW-L-- 391 (671)
T ss_pred -hhheeeeecCCCchhhhhccCchhcccceee---ccccceEEEecCCCCcEEEEeeeccccccchhhhccCCcEE-E--
Confidence 122122221111 111112222 1111111 0122344455555666655542 23556777776655443 3
Q ss_pred ecCCCeEEEEECCC-CcEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 745 GYSQNQILVWKYPT-LTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 745 GssDg~I~IWDl~s-~k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
|+.++-+..|+..+ +....+..+ ..++|..+.=.|+++ |..|+.+|.++.
T Consensus 392 gs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~ 443 (671)
T COG3292 392 GSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR 443 (671)
T ss_pred EecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEec
Confidence 44565666677666 333333332 356788888888888 667888886653
|
|
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=88.31 E-value=86 Score=40.03 Aligned_cols=110 Identities=12% Similarity=0.193 Sum_probs=71.7
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEc-CCCceEEEEeccCCCCCeEEEEEcCCC------CEEEEEecCceEEEeecC
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSA-CTSQVTRLCDLSADGNSVTSVAWNERG------NLVAVGTHHGYVQVWDVS 585 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~-~tg~~~~l~~l~~h~~~VtsLafSpdG------~~LAsGs~DGtI~IWDl~ 585 (819)
+.++....-+...++.+-.++.+.-+.. .+++.....+-..-+..|.|+++.+++ ++++.|+.|+.+++..+.
T Consensus 539 ~~~Iv~~avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~ 618 (1205)
T KOG1898|consen 539 RVRIVKCAVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLD 618 (1205)
T ss_pred ceEEEEEeecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEec
Confidence 4455555556666776666777655544 455554443222335678999998765 679999999999999988
Q ss_pred CceEEEEEe--cCCCCeEEEEe-----CC-----c-eeeeccCCCeEEEE
Q psy10114 586 VAKQVHKLV--GHTARVGALAW-----NG-----D-MLSSGSRDRMILQR 622 (819)
Q Consensus 586 tgk~i~tl~--gHs~~V~sLaw-----ng-----~-~LaSGS~DGtI~IW 622 (819)
...++..+. +-+.++.++.+ ++ . +|.+|-.+|.+.-.
T Consensus 619 p~d~l~~ls~q~l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~ 668 (1205)
T KOG1898|consen 619 PSDCLQPLSVQGLSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRF 668 (1205)
T ss_pred CcceEEEccccccCCCccceEEEEecccCCccceeEEEEecccccEEEEE
Confidence 766666554 44555555555 22 1 56777777776544
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=88.14 E-value=0.064 Score=61.41 Aligned_cols=145 Identities=19% Similarity=0.267 Sum_probs=103.1
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE-
Q psy10114 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ- 720 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~- 720 (819)
.....|-+.+.-++.++.+..+..||-. ++...... ..+...+++|..++..+++.+. ..+.+.+||+.+....+
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlAe--k~~piylwd~n~eytqqL 112 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLAE--KTGPIYLWDVNSEYTQQL 112 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhhh--cCCCeeechhhhhhHHHH
Confidence 3455678877779999999899999953 33333332 3455567889888887776654 78999999997643221
Q ss_pred EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcE
Q psy10114 721 CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETL 793 (819)
Q Consensus 721 ~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtI 793 (819)
.....+.-.-+.|++.+.+++. |...+.+.+++..+.+.+...-.|..+++++++.+.+. .+.++.|..+
T Consensus 113 E~gg~~s~sll~wsKg~~el~i--g~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~L 182 (615)
T KOG2247|consen 113 ESGGTSSKSLLAWSKGTPELVI--GNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDNTL 182 (615)
T ss_pred hccCcchHHHHhhccCCccccc--cccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHHHH
Confidence 1122223334789999999999 88899999999887777766656999999999998774 4455555443
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=87.98 E-value=0.17 Score=58.09 Aligned_cols=231 Identities=18% Similarity=0.247 Sum_probs=134.5
Q ss_pred EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--Cc-eeeeccCCCeEEEEECCCCCccceEEE
Q psy10114 559 TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GD-MLSSGSRDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 559 tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~-~LaSGS~DGtI~IWDi~t~~~~~v~~l 635 (819)
-...|-+.+.-+++++.+..+..||-. ++..... ..++....++|| ++ .++.+-..+.+.+||+.+...+.+..-
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~g 115 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKA-GQVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESG 115 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhh-cceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhcc
Confidence 345677877778999988899999854 3322222 234556678884 55 455667789999999987654332222
Q ss_pred ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC
Q psy10114 636 VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 636 ~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t 715 (819)
..|.... +.|++.+..++.|...|.+.|++..+.+.+.....|...++++++.+.+..++.. .|..+.+-...
T Consensus 116 g~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~d----cd~~L~v~~qe- 188 (615)
T KOG2247|consen 116 GTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCD----CDNTLSVTTQE- 188 (615)
T ss_pred CcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecC----cHHHHHHhhhc-
Confidence 2233333 7899999999999999999999998877666665688999999999988644332 34444332221
Q ss_pred CceeEEEcCCCCeEEE--------EEccCCCEEEEEEecCCCeEEEE--EC--CCCcEEEEEecCCCCEEEEEEecCCCE
Q psy10114 716 GQPMQCVDTGSQVCNL--------AWSKHSSELVSTHGYSQNQILVW--KY--PTLTQVAKLTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 716 g~~v~~l~~~s~V~sL--------afSpdg~~LastsGssDg~I~IW--Dl--~s~k~l~sl~gH~~~VtsLafSpDG~~ 783 (819)
++.......++....+ .|...|..+..+.. +.+.+. ++ ..+..--.++...+.+.+..|--||.
T Consensus 189 geta~ltevggepdnm~~~y~k~n~w~kage~m~sVvs---gKkhl~yak~nE~D~pval~fq~~~gni~cyrwylDg~- 264 (615)
T KOG2247|consen 189 GETASLTEVGGEPDNMDFFYGKVNGWGKAGETMVSVVS---GKKHLMYAKYNELDEPVALQFQEKYGNIHCYRWYLDGY- 264 (615)
T ss_pred cceeeeeeccCccchhhhheeeeeccccccceeeeeee---cHHHHHHHhhcCCCCccceEeeecCCceeEEEEecccc-
Confidence 2222222222222222 23334444444321 111111 11 11222224555566788888887874
Q ss_pred EEEEeCCCcEEEEECCCCc
Q psy10114 784 IVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~~ 802 (819)
|.-|-+-|.|-.-...+.+
T Consensus 265 i~igf~ag~iV~iS~h~ae 283 (615)
T KOG2247|consen 265 ILIGFDAGYIVSISAHNAE 283 (615)
T ss_pred ccccccceeEEEEeccchH
Confidence 3334444555544454444
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=86.81 E-value=56 Score=36.26 Aligned_cols=136 Identities=14% Similarity=0.013 Sum_probs=67.9
Q ss_pred CeEEEEEcCCCceEEEEeccC-CCC---CeEEEEEcCCCCEEEEEecC-----ceEEEeecCCceEE--EEEec---CCC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSA-DGN---SVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVAKQV--HKLVG---HTA 598 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~-h~~---~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tgk~i--~tl~g---Hs~ 598 (819)
+.+.++|..+.+..+...... ... ....+++ ++++++.|+.+ ..+.+||..+.+-. ..+.. ...
T Consensus 50 ~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~ 127 (341)
T PLN02153 50 KDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEA 127 (341)
T ss_pred CcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCC
Confidence 358889988877665432211 111 1222233 46677777753 35778898765432 22210 111
Q ss_pred Ce--EEEEeCCceeeeccCC-----------CeEEEEECCCCCccceEEEe---cccCCeEEEEECCCCCEEEEEECC--
Q psy10114 599 RV--GALAWNGDMLSSGSRD-----------RMILQRDVRTPNSQSERRLV---GHRQEVCGLKWSPDNQYLASGGND-- 660 (819)
Q Consensus 599 ~V--~sLawng~~LaSGS~D-----------GtI~IWDi~t~~~~~v~~l~---gH~~~VtsLafSpdg~~LaSGS~D-- 660 (819)
+. .....++.+.+.|+.+ ..+.+||..+.+...+.... .......... -+++.++.|+.+
T Consensus 128 R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~ 205 (341)
T PLN02153 128 RTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV--VQGKIWVVYGFATS 205 (341)
T ss_pred ceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE--ECCeEEEEeccccc
Confidence 11 1223366677777754 24778888876543222111 0111111122 255666655432
Q ss_pred -----------CeEEEEECCCCc
Q psy10114 661 -----------NRLYVWNLHSMS 672 (819)
Q Consensus 661 -----------GtI~IWDl~t~~ 672 (819)
+.+.+||..+.+
T Consensus 206 ~~~gG~~~~~~~~v~~yd~~~~~ 228 (341)
T PLN02153 206 ILPGGKSDYESNAVQFFDPASGK 228 (341)
T ss_pred cccCCccceecCceEEEEcCCCc
Confidence 458888987654
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=86.27 E-value=73 Score=37.06 Aligned_cols=226 Identities=12% Similarity=0.180 Sum_probs=115.3
Q ss_pred CCCEEEEEecCceEEEeecCCceE----EEEEecCCCCeEEEEeC------CceeeeccCCCeEEEEECCCCCc------
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQ----VHKLVGHTARVGALAWN------GDMLSSGSRDRMILQRDVRTPNS------ 629 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~----i~tl~gHs~~V~sLawn------g~~LaSGS~DGtI~IWDi~t~~~------ 629 (819)
+...|++|+.+|.++||+...++. +.--..-..+|..+... ++..++.=.-+.+.+|.+.....
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 346999999999999999864431 11112235677776651 11222223345666776633221
Q ss_pred -cceEEEecccCC--eEEEEECC----C-CCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 630 -QSERRLVGHRQE--VCGLKWSP----D-NQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 630 -~~v~~l~gH~~~--VtsLafSp----d-g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg 701 (819)
........|.-. ...++.-| . ..++.+=+.||++.+++-+...-...+.+ ----..+++.+.-..++++.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~s- 193 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTAS- 193 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEec-
Confidence 122233333322 22333322 2 35788889999999999765443333332 11223456777777666654
Q ss_pred cCCCCeEEEEECCC--------------------Cc---eeEEEcCCCCeEEEEE---ccCCCEEEEEEecCCCeEEEEE
Q psy10114 702 GTADRCIRFWNTLT--------------------GQ---PMQCVDTGSQVCNLAW---SKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 702 Gs~DgtIrIWDl~t--------------------g~---~v~~l~~~s~V~sLaf---Spdg~~LastsGssDg~I~IWD 755 (819)
.+..+..|.... ++ +-.++..+.++..+.. +.....+++. | ...+...+
T Consensus 194 --ss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvL-g--er~Lf~l~ 268 (418)
T PF14727_consen 194 --SSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVL-G--ERSLFCLK 268 (418)
T ss_pred --CceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEE-e--cceEEEEc
Confidence 456666665321 11 1122334444444433 2233344443 2 45566655
Q ss_pred CCCCcEEEEEecCCCCEEEEE-Ee----cCC---CEEEEEeCCCcEEEEECCC
Q psy10114 756 YPTLTQVAKLTGHSYRVLYLA-MS----PDG---EAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 756 l~s~k~l~sl~gH~~~VtsLa-fS----pDG---~~LaSGS~DGtIrIWdl~s 800 (819)
- +|.... .+..+....+++ |. .++ ..++.++.++++.||.=.+
T Consensus 269 ~-~G~l~~-~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~ 319 (418)
T PF14727_consen 269 D-NGSLRF-QKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTT 319 (418)
T ss_pred C-CCeEEE-EEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCe
Confidence 4 443332 222333333332 21 122 2478899999999887544
|
|
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=86.03 E-value=71 Score=36.68 Aligned_cols=115 Identities=21% Similarity=0.202 Sum_probs=72.3
Q ss_pred CEEEEEE--cC-CCCeEEEEEccCCCCeEEEEECC---CC----ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 683 AVKAIAW--SP-HHHGLLASGGGTADRCIRFWNTL---TG----QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 683 ~VtsLaf--SP-dg~~LLaSGgGs~DgtIrIWDl~---tg----~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
.+..+|+ ++ +|...+...+ .+|.+..|-+. +| +.++.+...+++..++.......++. |.++.-|.
T Consensus 157 e~yGlcly~~~~~g~~ya~v~~--k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYv--gEE~~GIW 232 (381)
T PF02333_consen 157 EPYGLCLYRSPSTGALYAFVNG--KDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYV--GEEDVGIW 232 (381)
T ss_dssp SEEEEEEEE-TTT--EEEEEEE--TTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEE--EETTTEEE
T ss_pred cceeeEEeecCCCCcEEEEEec--CCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEE--ecCccEEE
Confidence 4566776 33 4554444444 67888777654 33 45788888899999999999999999 88888888
Q ss_pred EEECCC-----CcEEEEEec--CCCCEEEEEEec--CCC--EEEEEeCCCcEEEEECCCC
Q psy10114 753 VWKYPT-----LTQVAKLTG--HSYRVLYLAMSP--DGE--AIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 753 IWDl~s-----~k~l~sl~g--H~~~VtsLafSp--DG~--~LaSGS~DGtIrIWdl~s~ 801 (819)
-|+.+- ++.+....+ ....|-.+++-. +|+ +|+|.-++++..+|+....
T Consensus 233 ~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 233 RYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 888751 222322222 345688888753 333 4455556789999998754
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=85.71 E-value=28 Score=38.25 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=67.8
Q ss_pred EecCCeEEEEECC-----CeEEEEEcCCCce----EEEEeccCCCCCeEEEEEcCCCCEEEEEec-----CceEEEeecC
Q psy10114 520 DWSSQNVLSVGLG-----SCVYLWSACTSQV----TRLCDLSADGNSVTSVAWNERGNLVAVGTH-----HGYVQVWDVS 585 (819)
Q Consensus 520 dwS~~~LLa~g~D-----g~V~LWd~~tg~~----~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-----DGtI~IWDl~ 585 (819)
...+..++.||.+ ..+..+|..+.+. ..+..+....... +++. -++++.+.|+. ...+..||..
T Consensus 70 ~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~-~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~ 147 (323)
T TIGR03548 70 SVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENG-SACY-KDGTLYVGGGNRNGKPSNKSYLFNLE 147 (323)
T ss_pred EECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCc-eEEE-ECCEEEEEeCcCCCccCceEEEEcCC
Confidence 3344445555543 3577778776654 2222222111111 2222 24666677764 2358888987
Q ss_pred CceEE--EEEecC-CCCeEEEEeCCceeeeccCCC----eEEEEECCCCCccceEEEec--ccC---CeEEEEECCCCCE
Q psy10114 586 VAKQV--HKLVGH-TARVGALAWNGDMLSSGSRDR----MILQRDVRTPNSQSERRLVG--HRQ---EVCGLKWSPDNQY 653 (819)
Q Consensus 586 tgk~i--~tl~gH-s~~V~sLawng~~LaSGS~DG----tI~IWDi~t~~~~~v~~l~g--H~~---~VtsLafSpdg~~ 653 (819)
+.+-. ..+... .....++..++.+.+.|+.++ .+..||.++.+...+..... ... ...++. ..+++.
T Consensus 148 ~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~-~~~~~i 226 (323)
T TIGR03548 148 TQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIK-INESLL 226 (323)
T ss_pred CCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEE-ECCCEE
Confidence 65432 222211 112223445778888887764 35688888766433222110 010 111222 235677
Q ss_pred EEEEECC
Q psy10114 654 LASGGND 660 (819)
Q Consensus 654 LaSGS~D 660 (819)
++.|+.+
T Consensus 227 yv~GG~~ 233 (323)
T TIGR03548 227 LCIGGFN 233 (323)
T ss_pred EEECCcC
Confidence 7888765
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=85.30 E-value=48 Score=38.83 Aligned_cols=137 Identities=7% Similarity=-0.068 Sum_probs=68.3
Q ss_pred eEEEEEcCCCceEEEEeccCCC--CCeEEEEEcCCCCEEEEEecC-----ceEEEeecCCceEEE--EEec-C--CCCeE
Q psy10114 534 CVYLWSACTSQVTRLCDLSADG--NSVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVAKQVH--KLVG-H--TARVG 601 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~--~~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tgk~i~--tl~g-H--s~~V~ 601 (819)
.+..+|..+.+...+....... ......+..-++.+.+.|+.+ ..+.++|+.+.+-.. .+.. . .....
T Consensus 194 ~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~ 273 (470)
T PLN02193 194 HLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHS 273 (470)
T ss_pred cEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceE
Confidence 4788898887665432110000 111111122245666777654 357888987764322 1110 1 11122
Q ss_pred EEEeCCceeeeccCCC-----eEEEEECCCCCccceEEE---ecccCCeEEEEECCCCCEEEEEECC----CeEEEEECC
Q psy10114 602 ALAWNGDMLSSGSRDR-----MILQRDVRTPNSQSERRL---VGHRQEVCGLKWSPDNQYLASGGND----NRLYVWNLH 669 (819)
Q Consensus 602 sLawng~~LaSGS~DG-----tI~IWDi~t~~~~~v~~l---~gH~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~ 669 (819)
....++.+.+.|+.++ .+..+|+.+.+....... ........... -+++.++.|+.+ +.+.+||+.
T Consensus 274 ~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~--~~gkiyviGG~~g~~~~dv~~yD~~ 351 (470)
T PLN02193 274 MAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEV--VQGKVWVVYGFNGCEVDDVHYYDPV 351 (470)
T ss_pred EEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEE--ECCcEEEEECCCCCccCceEEEECC
Confidence 3334667777777543 467788777553221110 00111111222 256777777755 458899987
Q ss_pred CCc
Q psy10114 670 SMS 672 (819)
Q Consensus 670 t~~ 672 (819)
+.+
T Consensus 352 t~~ 354 (470)
T PLN02193 352 QDK 354 (470)
T ss_pred CCE
Confidence 754
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=84.33 E-value=86 Score=36.20 Aligned_cols=107 Identities=11% Similarity=0.180 Sum_probs=64.8
Q ss_pred ccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc-----eeEEEec--CCCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS-----PLQTYTE--HLAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 638 H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~-----~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
....+.++.+.+++..++++ .+|.+.. ....++ ....... ....+.++.+.+++. ++++| .+|.+..
T Consensus 279 ~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~-~~a~G---~~G~v~~ 352 (398)
T PLN00033 279 SARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKE-AWAAG---GSGILLR 352 (398)
T ss_pred CccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCc-EEEEE---CCCcEEE
Confidence 34568899999998877655 5566543 333443 1222211 223588999998876 55555 4676665
Q ss_pred EECCCCceeEEEc----CCCCeEEEEEccCCCEEEEEEecCCCeEEEE
Q psy10114 711 WNTLTGQPMQCVD----TGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 711 WDl~tg~~v~~l~----~~s~V~sLafSpdg~~LastsGssDg~I~IW 754 (819)
- ...|+.-.... .......+.|.++++-.++ | .+|.|.-|
T Consensus 353 s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~--G-~~G~il~~ 396 (398)
T PLN00033 353 S-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL--G-NDGVLLRY 396 (398)
T ss_pred e-CCCCcceeEccccCCCCcceeEEEEcCCCceEEE--e-CCcEEEEe
Confidence 5 34455433332 2356789999888777776 4 56766544
|
|
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=84.26 E-value=32 Score=42.34 Aligned_cols=221 Identities=13% Similarity=0.198 Sum_probs=110.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec------CCCCeEEEEeC--CceeeeccCCCeEEEEECC
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG------HTARVGALAWN--GDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g------Hs~~V~sLawn--g~~LaSGS~DGtI~IWDi~ 625 (819)
-.+.|.+.+||.|.+.+++...+..|-++|.. -..+....- .-+.-..+.|. ..++- +..-..++.|..
T Consensus 111 v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k~-fd~ise~~L~~~dl~ef~khi~VgWgkketqfr--gk~~raqlrdpt 187 (1243)
T COG5290 111 VSNGIVAASWSADEKTWCVVTSTREILLFDKY-FDPISEYHLKKSDLVEFGKHIRVGWGKKETQFR--GKGARAQLRDPT 187 (1243)
T ss_pred ccCceEEEeeccCCceEEEEEcCceEEEEecc-ccccchhhcchhHHHHhccceEeeecccchhcc--ccchhhhccCCC
Confidence 35778899999999988888888888887732 111111100 00111234441 11110 011111233322
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECC----CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND----NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg 701 (819)
.+...-...+..-...=.-+.|-.|.++.+++... ..+++|..+ |+.-..-....+.-..+.|-|+|..+.+.+.
T Consensus 188 mp~~vD~G~l~avd~~k~~i~wrgD~~y~~v~r~Ee~prra~rvysre-g~lds~sep~~g~e~~LSWkpqgS~~ati~t 266 (1243)
T COG5290 188 MPYMVDYGDLFAVDTNKKIIFWRGDTEYNLVGRSEERPRRAFRVYSRE-GQLDSASEPVTGMEHQLSWKPQGSKYATIGT 266 (1243)
T ss_pred CcccccccceeEeeCCceEEEEccCcceeeecchhcccccceeeeccc-cccccccCCcccchhccccccCCceeeeecc
Confidence 22111111111111122345677777777766543 235666532 2211111111222345889999997766652
Q ss_pred c--CCCCeEEEEECCC---CceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEE
Q psy10114 702 G--TADRCIRFWNTLT---GQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA 776 (819)
Q Consensus 702 G--s~DgtIrIWDl~t---g~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLa 776 (819)
. +....|+++.-+. |+.-.....+......+|+-....++.+ ..+.+.+|-..+..-.-...-.-..+..+.
T Consensus 267 d~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~---~~n~~~lwttkNyhWYLK~e~~ip~~s~vk 343 (1243)
T COG5290 267 DGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA---EGNLLKLWTTKNYHWYLKVERQIPGISYVK 343 (1243)
T ss_pred CCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHh---hcceEEEEEccceEEEEEEeecCCCcceee
Confidence 1 1223466665322 3322223344556677787776666653 457899998776655444443445577788
Q ss_pred EecCC
Q psy10114 777 MSPDG 781 (819)
Q Consensus 777 fSpDG 781 (819)
|+|..
T Consensus 344 whpe~ 348 (1243)
T COG5290 344 WHPEE 348 (1243)
T ss_pred ecccc
Confidence 88853
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=84.23 E-value=2.1 Score=52.55 Aligned_cols=154 Identities=16% Similarity=0.253 Sum_probs=84.7
Q ss_pred CeEEEEEcC--CCceEEEEe---ccCCCCCeEEEEEcC---CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEE
Q psy10114 533 SCVYLWSAC--TSQVTRLCD---LSADGNSVTSVAWNE---RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALA 604 (819)
Q Consensus 533 g~V~LWd~~--tg~~~~l~~---l~~h~~~VtsLafSp---dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLa 604 (819)
|...+|++. .|++..... .......+.-|.|.| +..++..+-.+|.|++.+..+... ..+.+|..++..++
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a 231 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA 231 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence 566778764 343322111 122234445555654 567788888889888877655433 34456888887777
Q ss_pred e-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEEC-----CCCceeEEEe
Q psy10114 605 W-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNL-----HSMSPLQTYT 678 (819)
Q Consensus 605 w-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl-----~t~~~i~t~~ 678 (819)
| ..+++...+ .||||+.+|.++.||.++.|.+ ...+++...+
T Consensus 232 ~~~~g~~~l~~--------------------------------lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewk 279 (1283)
T KOG1916|consen 232 FFAEGVLKLAS--------------------------------LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWK 279 (1283)
T ss_pred HHhhchhhhee--------------------------------eCCCCcEEEEeecCCccceeeeeeeccccHhhhhccC
Confidence 6 222211110 6788888888888887776654 3334555566
Q ss_pred cCC-CCEEEEEEcCCC-------CeEEEEEccCCCCeEEEEECCCCcee
Q psy10114 679 EHL-AAVKAIAWSPHH-------HGLLASGGGTADRCIRFWNTLTGQPM 719 (819)
Q Consensus 679 ~h~-~~VtsLafSPdg-------~~LLaSGgGs~DgtIrIWDl~tg~~v 719 (819)
.|. .+-.|.-++.+. .+.+...+...++.+++|....-+|.
T Consensus 280 phd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 280 PHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred CCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 665 232232233221 11222111235677888877665554
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=84.05 E-value=27 Score=38.77 Aligned_cols=111 Identities=11% Similarity=0.058 Sum_probs=58.3
Q ss_pred EecCCeEEEEECC-----CeEEEEEcCCCceEEEEeccC---CCCCeEEEEEcCCCCEEEEEecC-----------ceEE
Q psy10114 520 DWSSQNVLSVGLG-----SCVYLWSACTSQVTRLCDLSA---DGNSVTSVAWNERGNLVAVGTHH-----------GYVQ 580 (819)
Q Consensus 520 dwS~~~LLa~g~D-----g~V~LWd~~tg~~~~l~~l~~---h~~~VtsLafSpdG~~LAsGs~D-----------GtI~ 580 (819)
...+..++.||.+ +.+.++|..+.+...+..+.. ........+..-++++.+.|+.+ ..+.
T Consensus 83 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~ 162 (341)
T PLN02153 83 AVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIE 162 (341)
T ss_pred EECCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEE
Confidence 3344445555542 358889998887765543311 11111212222356677777753 2477
Q ss_pred EeecCCceEEEE--Ee---cCCCCeEEEEeCCceeeeccCC-------------CeEEEEECCCCCcc
Q psy10114 581 VWDVSVAKQVHK--LV---GHTARVGALAWNGDMLSSGSRD-------------RMILQRDVRTPNSQ 630 (819)
Q Consensus 581 IWDl~tgk~i~t--l~---gHs~~V~sLawng~~LaSGS~D-------------GtI~IWDi~t~~~~ 630 (819)
+||.++.+-... .. ..........+++.+++.|+.+ ..+.+||..+.+..
T Consensus 163 ~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~ 230 (341)
T PLN02153 163 AYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWT 230 (341)
T ss_pred EEECCCCeEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEE
Confidence 888876543221 11 1111223344577766655432 45788898876654
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=83.94 E-value=15 Score=45.47 Aligned_cols=71 Identities=21% Similarity=0.349 Sum_probs=45.5
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEEC-C---------CCce---eEEE--------ecCCCCEEEEEEcCCC---Ce
Q psy10114 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNL-H---------SMSP---LQTY--------TEHLAAVKAIAWSPHH---HG 695 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS~DGtI~IWDl-~---------t~~~---i~t~--------~~h~~~VtsLafSPdg---~~ 695 (819)
-+|..+..+++|+++|..|..|.. |-.+ + .++. .+++ ..+...|..+.|+|.+ ..
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 468899999999999999886643 3333 1 1111 1111 1234577888888863 55
Q ss_pred EEEEEccCCCCeEEEEECC
Q psy10114 696 LLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~ 714 (819)
+++-. .|+++|+||+.
T Consensus 164 l~vLt---sdn~lR~y~~~ 179 (717)
T PF10168_consen 164 LVVLT---SDNTLRLYDIS 179 (717)
T ss_pred EEEEe---cCCEEEEEecC
Confidence 55543 58888888875
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=83.68 E-value=42 Score=32.99 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=72.7
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCCc--------eeEEEecCCCCEEEEEEcC----CCCeEEEEEccCCCCeEEEEE
Q psy10114 645 LKWSPDNQYLASGGNDNRLYVWNLHSMS--------PLQTYTEHLAAVKAIAWSP----HHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 645 LafSpdg~~LaSGS~DGtI~IWDl~t~~--------~i~t~~~h~~~VtsLafSP----dg~~LLaSGgGs~DgtIrIWD 712 (819)
-+|......|++++.-|+|.|++..... .+..+. -...|++++-.+ ++.-++..| ....+..||
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliG---t~t~llaYD 79 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIG---TQTSLLAYD 79 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEe---ccceEEEEE
Confidence 4566666678999999999999875432 333333 456677776544 234466666 478899999
Q ss_pred CCCCceeEEEcCCCCeEEEEEccC---CCEEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 713 TLTGQPMQCVDTGSQVCNLAWSKH---SSELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 713 l~tg~~v~~l~~~s~V~sLafSpd---g~~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
+.....+...+....+.++.+-.- ...++.+ | .+..|.-||..-.+...+.
T Consensus 80 V~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~iv-G-Gncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 80 VENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIV-G-GNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred cccCchhhhhhCccceeEEEEEecCCCCCcEEEE-C-ceEEEEEeCCCCcEEEEEe
Confidence 998877766666677777766432 2334443 3 3566777776544444433
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=83.62 E-value=46 Score=36.92 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=29.3
Q ss_pred EecCCeEEEEECC-----------CeEEEEEcCCCceEEEEec-cCCCCCeEEEEEcCCCCEEEEEecC
Q psy10114 520 DWSSQNVLSVGLG-----------SCVYLWSACTSQVTRLCDL-SADGNSVTSVAWNERGNLVAVGTHH 576 (819)
Q Consensus 520 dwS~~~LLa~g~D-----------g~V~LWd~~tg~~~~l~~l-~~h~~~VtsLafSpdG~~LAsGs~D 576 (819)
..++...+.||.+ ..+..||..+.+..++... ........ ....-+|+..+.|+.+
T Consensus 61 ~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~-~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 61 AIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGAS-GFSLHNGQAYFTGGVN 128 (346)
T ss_pred EECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCccccee-EEEEeCCEEEEEcCcC
Confidence 3345555666542 2478889888776654311 11111111 1113467888888764
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=83.25 E-value=35 Score=38.60 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=22.7
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D 576 (819)
.+..||..+.+...+.........-.+....-++++.+.|+.+
T Consensus 107 ~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 107 DVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred cEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 4788898887776643211111111122221467788888754
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=82.80 E-value=99 Score=35.73 Aligned_cols=143 Identities=14% Similarity=0.200 Sum_probs=81.0
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCce--eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--
Q psy10114 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP--LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-- 717 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-- 717 (819)
...+..++|+.+++.|.....++-||- ++. ...-......+.++.+.+++..+++. .+|.+. +....++
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~--G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g----~~G~l~-~S~d~G~~~ 313 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEP--GQPYWQPHNRASARRIQNMGWRADGGLWLLT----RGGGLY-VSKGTGLTE 313 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCC--CCcceEEecCCCccceeeeeEcCCCCEEEEe----CCceEE-EecCCCCcc
Confidence 445566788877777655433344443 221 11112335678899999998866554 456553 4444443
Q ss_pred ---eeEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe---cCCCCEEEEEEecCCCEEEEEe
Q psy10114 718 ---PMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT---GHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 718 ---~v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~---gH~~~VtsLafSpDG~~LaSGS 788 (819)
....... ...+.++.+.+++..+++ | ..|.+..-. ..++.-.... .-......+.|.++++-+++ +
T Consensus 314 ~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~--G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G 388 (398)
T PLN00033 314 EDFDFEEADIKSRGFGILDVGYRSKKEAWAA--G-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-G 388 (398)
T ss_pred cccceeecccCCCCcceEEEEEcCCCcEEEE--E-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE-e
Confidence 2333322 235888999888777666 4 456555543 3333322222 22456788998777666654 5
Q ss_pred CCCcEEEE
Q psy10114 789 GDETLRFW 796 (819)
Q Consensus 789 ~DGtIrIW 796 (819)
.+|.|.-|
T Consensus 389 ~~G~il~~ 396 (398)
T PLN00033 389 NDGVLLRY 396 (398)
T ss_pred CCcEEEEe
Confidence 67776544
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=80.95 E-value=36 Score=40.19 Aligned_cols=98 Identities=18% Similarity=0.154 Sum_probs=54.3
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee
Q psy10114 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v 719 (819)
-+|..+..++.|..++-.|.+|.+..+=.+...+-..++..+..|+|=.+.-+.+ ++++
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~-~fts-------------------- 162 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAER-FFTS-------------------- 162 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccce-eecc--------------------
Confidence 3577888999999999999998665543332222233333333344333322211 2221
Q ss_pred EEEcCCCCeEEEEEccCC---CEEEEEEecCCCeEEEEECCCCcEEE
Q psy10114 720 QCVDTGSQVCNLAWSKHS---SELVSTHGYSQNQILVWKYPTLTQVA 763 (819)
Q Consensus 720 ~~l~~~s~V~sLafSpdg---~~LastsGssDg~I~IWDl~s~k~l~ 763 (819)
...-.+..++|+|+. ..+.. -.+|+.|++||....+.+.
T Consensus 163 ---s~~ltl~Qa~WHP~S~~D~hL~i--L~sdnviRiy~lS~~tely 204 (741)
T KOG4460|consen 163 ---STSLTLKQAAWHPSSILDPHLVL--LTSDNVIRIYSLSEPTELY 204 (741)
T ss_pred ---CCceeeeeccccCCccCCceEEE--EecCcEEEEEecCCcchhh
Confidence 112234556777765 34444 3467888888877665553
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=80.35 E-value=14 Score=43.94 Aligned_cols=37 Identities=27% Similarity=0.410 Sum_probs=28.2
Q ss_pred CeEEEEECC----CCCEEEEEECCCeEEEEECCCCceeEEE
Q psy10114 641 EVCGLKWSP----DNQYLASGGNDNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 641 ~VtsLafSp----dg~~LaSGS~DGtI~IWDl~t~~~i~t~ 677 (819)
.+..++.+. +..++++.+.|+++++||+.+++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 344555555 6789999999999999999999986665
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 819 | ||||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 1e-90 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 1e-90 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 2e-89 | ||
| 4aez_A | 401 | Crystal Structure Of Mitotic Checkpoint Complex Len | 3e-76 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 3e-20 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 1e-17 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 1e-16 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 3e-13 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-06 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 3e-13 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 3e-08 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 4e-13 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 3e-08 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 4e-13 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 4e-10 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 4e-13 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 5e-10 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 4e-13 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 5e-10 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 5e-13 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 8e-10 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 5e-13 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 4e-10 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 5e-13 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 4e-10 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 5e-13 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 4e-10 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 5e-13 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 5e-10 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 5e-13 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 4e-10 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 5e-13 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 4e-10 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 5e-13 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 4e-10 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 7e-13 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 5e-10 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 7e-13 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 5e-10 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 9e-13 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 9e-10 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 1e-12 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 1e-09 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-12 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 2e-12 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 2e-12 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 2e-12 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 2e-12 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 6e-12 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 7e-12 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 5e-10 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 9e-12 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 5e-10 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 9e-12 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 2e-05 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 1e-11 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 1e-11 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 2e-05 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 1e-11 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 2e-05 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 1e-11 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 2e-05 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 1e-11 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 2e-05 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 2e-11 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 4e-11 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 5e-11 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 5e-11 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 5e-11 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 2e-07 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 1e-10 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 2e-10 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 6e-10 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 8e-10 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 9e-10 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-09 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 1e-07 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 2e-09 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 2e-09 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 2e-09 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 3e-08 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 4e-09 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 5e-09 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 5e-09 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 1e-07 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 6e-09 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 7e-09 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 8e-08 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 1e-06 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 2e-06 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 7e-06 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 8e-06 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 9e-06 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 6e-04 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 2e-05 | ||
| 1gxr_A | 337 | Wd40 Region Of Human Groucho/tle1 Length = 337 | 2e-05 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 3e-05 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 3e-05 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 3e-05 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 5e-05 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 1e-04 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 5e-05 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 7e-05 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 1e-04 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 2e-04 | ||
| 2pm9_A | 416 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 3e-04 |
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|2PM9|A Chain A, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 416 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 819 | |||
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.98 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.98 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.98 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.98 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.98 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.98 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.97 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.97 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.97 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.97 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.97 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.97 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.97 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.97 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.97 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.97 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.97 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.97 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.97 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.97 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.97 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.97 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.97 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.96 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.96 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.96 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.96 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.95 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.95 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.95 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.95 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.95 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.95 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.95 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.95 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.95 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.95 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.94 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.94 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.94 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.93 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.92 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.92 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.91 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.91 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.91 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.9 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.9 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.9 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.89 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.89 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.89 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.88 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.87 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.86 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.86 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.86 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.85 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.84 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.84 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.83 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.83 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.83 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.83 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.8 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.8 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.8 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.8 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.8 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.79 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.79 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.79 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.78 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.77 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.77 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.75 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.75 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.73 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.7 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.7 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.7 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.7 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.68 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.67 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.67 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.66 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.66 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.66 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.65 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.64 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.63 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.59 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.59 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.58 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.58 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.57 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.55 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.55 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.53 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.52 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.51 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.51 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.51 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.5 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.5 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.5 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.46 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.45 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.45 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.45 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.42 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.4 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.39 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.37 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.37 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.36 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.34 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.31 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.3 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.29 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.29 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.28 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.28 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.23 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.23 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.21 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.2 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.2 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.19 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.19 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.19 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.17 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.16 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.16 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.12 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.11 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.06 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.06 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.05 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.03 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.99 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.96 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.96 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.93 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.92 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.9 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.9 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.89 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.86 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.85 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.85 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.85 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.84 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.83 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.77 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.76 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.76 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.75 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.71 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.71 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.67 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.67 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.64 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.63 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.63 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.55 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.55 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.53 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.52 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.51 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.5 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.47 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.47 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.46 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.39 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.34 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.34 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.34 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.33 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.32 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.29 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.29 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.26 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.26 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.22 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.15 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.14 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.12 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.11 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.07 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.06 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.06 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.04 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.03 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.99 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.96 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.86 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.82 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.8 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.74 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.72 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.69 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.66 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.66 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.66 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.59 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.59 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.58 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.53 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.51 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.51 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.47 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.42 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.4 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.39 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.36 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.35 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.32 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.29 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.25 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.21 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.21 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.12 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.03 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.02 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.88 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.87 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.83 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 96.75 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.74 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.69 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.64 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 96.6 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 96.59 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.47 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.36 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 96.36 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 96.34 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.22 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.14 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 95.96 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 95.88 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 95.8 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 95.7 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 95.69 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.64 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 95.56 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.41 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.28 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 95.15 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 95.02 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 94.93 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 94.93 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 94.63 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 94.53 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.28 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 93.87 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 93.62 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 93.45 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 93.07 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 92.9 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 91.95 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 91.1 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 90.11 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 89.91 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 86.88 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 83.69 |
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=457.86 Aligned_cols=318 Identities=51% Similarity=0.922 Sum_probs=294.4
Q ss_pred cCCcccceeccCCCceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCC
Q psy10114 488 RSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERG 567 (819)
Q Consensus 488 ~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG 567 (819)
.++++..|+|+..|+++||||++++|||+++++|+.++++++|.|++|+|||+.+++..+++.+.+|.+.|++++|+|+|
T Consensus 80 ~~~~~~~r~i~~~p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg 159 (420)
T 4gga_A 80 GSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG 159 (420)
T ss_dssp ------CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS
T ss_pred CCccCCCcccCCCCceEEECCCCcccccceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC
Confidence 35567789999999999999999999999999999999999999999999999999999888888899999999999999
Q ss_pred CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEE
Q psy10114 568 NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKW 647 (819)
Q Consensus 568 ~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLaf 647 (819)
++||+|+.||.|+|||+++++.++.+.+|...+.++++++..+++|+.|+.+++||..... .....+.+|...++++.|
T Consensus 160 ~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 160 NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEE
T ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccc-eeeEEecccccceeeeee
Confidence 9999999999999999999999999999999999999999999999999999999998766 356788999999999999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCc----eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 648 SPDNQYLASGGNDNRLYVWNLHSMS----PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 648 Spdg~~LaSGS~DGtI~IWDl~t~~----~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
+++++++++++.||.+++||..+++ .+.....|.+.|.+++|+|++..++++++|+.|++|++||+.+++....+.
T Consensus 239 ~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 239 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE
T ss_pred cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec
Confidence 9999999999999999999998765 456778899999999999999999998888899999999999999999999
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 724 TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 724 ~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
....+.++.|+++++.+++++|+.|+.|++||+++++++.++.+|.+.|++++|+|||++|+||+.||+|+|||+++...
T Consensus 319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999987654
Q ss_pred ecc
Q psy10114 804 SQR 806 (819)
Q Consensus 804 ~~k 806 (819)
..+
T Consensus 399 ~~~ 401 (420)
T 4gga_A 399 ARR 401 (420)
T ss_dssp C--
T ss_pred cch
Confidence 433
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-47 Score=415.42 Aligned_cols=315 Identities=45% Similarity=0.824 Sum_probs=285.5
Q ss_pred cccceeccCCCceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEE
Q psy10114 491 RKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLV 570 (819)
Q Consensus 491 ~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~L 570 (819)
.+..|+++..|.++++++...+++++++++|+++.+++++.|+.|++||..+++........ |.+.|++++|+|+|++|
T Consensus 71 ~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~~~~~l 149 (401)
T 4aez_A 71 TPAKRRFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETD-ESTYVASVKWSHDGSFL 149 (401)
T ss_dssp ----CCCCCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECTTSSEE
T ss_pred ccccCcCCCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECCCCCEE
Confidence 34568899999999999999999999999999999999999999999999999887765543 78899999999999999
Q ss_pred EEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 571 AVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 571 AsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
++|+.||.|++||+++++.+..+.+|...|.+++|+++.+++|+.||.|++||++... .....+.+|.+.|.+++|+|+
T Consensus 150 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 150 SVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIAN-HQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTT
T ss_pred EEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCc-ceeeEEcCCCCCeeEEEEcCC
Confidence 9999999999999999999999999999999999999999999999999999998654 346778899999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEE
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN 730 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~s 730 (819)
++++++|+.||.|++||+++++++..+..|...|.+++|+|++..++++++|+.|+.|++||+.+++.+..+.++..+.+
T Consensus 229 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~ 308 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTS 308 (401)
T ss_dssp SSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEE
T ss_pred CCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 99999999999999999999999999999999999999999999999998777899999999999999999999999999
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCCCcEE--EEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQV--AKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s~k~l--~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
++|+|+++.+++++|+.||.|++||+.+++.. ..+.+|.+.|.+++|+|+|++|++|+.||.|++||+.+++...+.
T Consensus 309 ~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 309 LIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 99999999999987889999999999986544 457799999999999999999999999999999999988765543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=381.97 Aligned_cols=311 Identities=51% Similarity=0.924 Sum_probs=288.6
Q ss_pred cccceeccCCCceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEE
Q psy10114 491 RKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLV 570 (819)
Q Consensus 491 ~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~L 570 (819)
++..|.||..|+++||||++.+|||+++++||+++++++|.|++|+|||+.+++..+...+.+|...|++++|+|+|++|
T Consensus 3 ~~~~r~~p~~p~rvldap~~~~d~y~~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l 82 (318)
T 4ggc_A 3 RKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL 82 (318)
T ss_dssp ---CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE
T ss_pred CCCCcccCCCCCEEeeCCCCcccccceEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEE
Confidence 45678999999999999999999999999999988999999999999999999998888888899999999999999999
Q ss_pred EEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 571 AVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 571 AsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
++|+.||+|++||+++++.+..+.+|...+.++++++..+++|+.++.+++|+..... .....+.+|...+..+.++++
T Consensus 83 ~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTT
T ss_pred EEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc-eeEEEEcCccCceEEEEEcCC
Confidence 9999999999999999999999999999999999999999999999999999998766 356778899999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCce----eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSP----LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s 726 (819)
++++++++.||.|++||+++++. ......+.+.|.+++++|++..++..++|+.+++|++||...+.......+..
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~ 241 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS 241 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee
Confidence 99999999999999999987653 45566788999999999999888877767799999999999999988888999
Q ss_pred CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.+..+.|+++++.+++++|..|+.|++||+++++++.++.+|.+.|++++|+|||++|+||+.||+|++||+.+.+
T Consensus 242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9999999999999999878899999999999999999999999999999999999999999999999999998654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=344.32 Aligned_cols=280 Identities=21% Similarity=0.340 Sum_probs=256.9
Q ss_pred CcceEEEEEecC------CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC
Q psy10114 512 DDFYLNLVDWSS------QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS 585 (819)
Q Consensus 512 dDfyv~~ldwS~------~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~ 585 (819)
++-.+.+++|++ +.+++++.|+.|++|+..+++......+.+|...|.+++|++++..+++|+.||+|++||++
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~ 110 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 110 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 344678888864 47999999999999999888776667789999999999999999999999999999999999
Q ss_pred CceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 586 VAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 586 tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
+++.+..+..|...+.+++| +++.|++|+.||.|++||+++++ ....+..|...|.+++|+|++++|++|+.||.|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 111 NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS--EEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--eeEEecCCCceEEEEEECCCCCEEEEEcCCCeE
Confidence 99999999999999999999 57799999999999999999876 346778889999999999999999999999999
Q ss_pred EEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEE
Q psy10114 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~Las 742 (819)
++||+++++.+..+.+|...|.+++|+|+++.+ ++|+ .|++|++||+++++....+. +...|.+++|+|+++.+++
T Consensus 189 ~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l-~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 189 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL-VTAS--DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp EEEETTTTEEEEEECCCSSCCCEEEECTTSCEE-EEEC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEEEEEcccCCceeEEEEcCCCCEE-EEEc--CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEE
Confidence 999999999999999999999999999999855 4554 89999999999998887774 6678999999999999998
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
++.|+.|++||+.+++.+.++.+|.+.|.+++|+|+|++|++++.||+|++||+
T Consensus 266 --~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 266 --SSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp --EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred --EeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 789999999999999999999999999999999999999999999999999996
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=338.10 Aligned_cols=274 Identities=23% Similarity=0.439 Sum_probs=248.1
Q ss_pred eEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----e
Q psy10114 515 YLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----K 588 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----k 588 (819)
.+.++.|++ +.+++++.|+.|++||..+++... .+..|...|.+++|+|+|++|++|+.||.|++||+.++ +
T Consensus 57 ~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH--AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE--EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce--EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce
Confidence 466777764 579999999999999999887654 45678899999999999999999999999999999765 4
Q ss_pred EEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 589 QVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
....+.+|.+.|.++.| +++.+++|+.|+.|++||+++++ ....+.+|.+.|.+++|+|+++++++|+.||+|++||
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCc--EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 66778899999999999 45679999999999999998865 4577889999999999999999999999999999999
Q ss_pred CCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEEEE
Q psy10114 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 668 l~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~Lasts 744 (819)
+++++++..+.+|...|.+++|+|++..+++ |+ .|++|++||+++++.+..+.+. ..|.+++|+|+|+.+++
T Consensus 213 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s-~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-- 287 (340)
T 1got_B 213 VREGMCRQTFTGHESDINAICFFPNGNAFAT-GS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-- 287 (340)
T ss_dssp TTTCSEEEEECCCSSCEEEEEECTTSSEEEE-EE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE--
T ss_pred CCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE-Ec--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE--
Confidence 9999999999999999999999999986554 44 7999999999999888877654 36999999999999999
Q ss_pred ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 745 GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 745 GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
|+.|+.|++||..+++.+..+.+|.+.|.+++|+|||++|++|+.||+|++||
T Consensus 288 g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 88999999999999999999999999999999999999999999999999996
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=351.69 Aligned_cols=277 Identities=24% Similarity=0.409 Sum_probs=253.8
Q ss_pred ceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
-.+.++.|++ +.+++++.|+.|++||..+++... .+.+|.+.|.+++|+|+|++|++|+.||+|++||+.+++++.
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~--~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE--EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 3467777774 579999999999999999988654 577899999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
++.+|...|.+++| +++.+++|+.|++|++||++++. ....+.+|...|.+++++++++++++|+.|++|++||++
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~ 264 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999999 57799999999999999999876 457889999999999999999999999999999999999
Q ss_pred CCceeEEEecCCCCEEEEEEcCCC-------------------CeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeE
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHH-------------------HGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVC 729 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg-------------------~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~ 729 (819)
+++....+.+|...|.+++|+|++ ..++++|+ .|++|++||+++++++..+. +...|.
T Consensus 265 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~ 342 (410)
T 1vyh_C 265 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVR 342 (410)
T ss_dssp TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEE
Confidence 999999999999999999999973 22566665 89999999999999888774 677899
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
+++|+|+|+++++ |+.|+.|++||+.+++.+..+.+|...|++++|+|++.+|++|+.||+|++|++
T Consensus 343 ~v~~~~~g~~l~s--~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 343 GVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEECSSSSCEEE--EETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEEcCCCCEEEE--EeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999999998 789999999999999999999999999999999999999999999999999986
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=324.38 Aligned_cols=280 Identities=22% Similarity=0.370 Sum_probs=246.7
Q ss_pred cceEEEEEecC---CeEEEEECCCeEEEEEcCCCce---EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 513 DFYLNLVDWSS---QNVLSVGLGSCVYLWSACTSQV---TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 513 Dfyv~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~---~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
.-.+.+++|++ +.+++++.|+.|++|+..+.+. ..+..+.+|...|.+++|+++|++|++|+.||+|++||+++
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT 96 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 34577888874 5799999999999999865321 23456789999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC------CCEEEEEE
Q psy10114 587 AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD------NQYLASGG 658 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd------g~~LaSGS 658 (819)
++.+..+.+|...|.+++| +++.+++|+.|++|++||++. .....+.+|...|.+++|+|. +..+++|+
T Consensus 97 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 97 GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG---QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECCC------CCEEEEEE
T ss_pred CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe
Confidence 9999999999999999999 467999999999999999975 345778899999999999985 45899999
Q ss_pred CCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCC
Q psy10114 659 NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSS 738 (819)
Q Consensus 659 ~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~ 738 (819)
.|+.|++||+++++....+.+|...|.+++|+|+++.+++ |+ .|++|++||+.+++.+..+.....+.+++|+|++.
T Consensus 174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s-~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS-AG--KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRY 250 (319)
T ss_dssp TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEE-EE--TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSS
T ss_pred CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEE-Ee--CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCC
Confidence 9999999999999999999999999999999999986554 44 79999999999999999998888999999999999
Q ss_pred EEEEEEecCCCeEEEEECCCCcEEEEEec--------CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 739 ELVSTHGYSQNQILVWKYPTLTQVAKLTG--------HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s~k~l~sl~g--------H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.+++ +. ++.+++|++.....+..+.. |...+.+++|+|||++|++|+.||.|++||+.++
T Consensus 251 ~la~--~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 251 WLAA--AT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEE--EE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEEE--Ec-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 9887 33 56799999998877776653 4567999999999999999999999999998764
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=326.20 Aligned_cols=274 Identities=23% Similarity=0.399 Sum_probs=244.3
Q ss_pred eEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc-----
Q psy10114 515 YLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----- 587 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----- 587 (819)
.+.+++|++ ..+++++.|+.|++||..+++... .+..|...|.+++|+|+|..+++|+.|+.+++|++...
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~--~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH--AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce--EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc
Confidence 467777774 579999999999999998887655 44557789999999999999999999999999998643
Q ss_pred -eEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC--CCCEEEEEECCCe
Q psy10114 588 -KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP--DNQYLASGGNDNR 662 (819)
Q Consensus 588 -k~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp--dg~~LaSGS~DGt 662 (819)
.....+.+|...|.+++| ++..|++|+.||+|++||+++++ ....+.+|...|.+++|+| +++.|++|+.||+
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 345677889999999999 46689999999999999999866 4578899999999999988 5789999999999
Q ss_pred EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC---CCeEEEEEccCCCE
Q psy10114 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSE 739 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~ 739 (819)
|++||+++++++..+.+|...|.+++|+|++..++ +|+ .|++|++||+++++.+..+... ..+.+++|+|+++.
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFA-SGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEE-EEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE
Confidence 99999999999999999999999999999998554 544 8999999999998887766433 46899999999999
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 740 LVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
+++ |+.|+.|++||+.+++.+..+.+|.+.|++++|+|||++|++|+.||+|++|+
T Consensus 299 l~~--g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 299 LFA--GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEE--EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEE--EECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999 88999999999999999999999999999999999999999999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=325.94 Aligned_cols=289 Identities=20% Similarity=0.366 Sum_probs=236.3
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEE-eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--eE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLC-DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--KQ 589 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~-~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--k~ 589 (819)
.+..++|+ ++.+++++.|+.|++||..+++..... ...+|.+.|.+++|+|+|++|++|+.||+|++||..++ +.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 45566676 467999999999999999887654322 34689999999999999999999999999999998876 56
Q ss_pred EEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc-cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 590 VHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS-QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 590 i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~-~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
+..+.+|...|.+++| ++++|++|+.|+.|++||++.+.. .....+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 7889999999999999 577999999999999999987643 3356678999999999999999999999999999999
Q ss_pred ECCCCc--eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC---------------ceeEEEc--CCCC
Q psy10114 667 NLHSMS--PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG---------------QPMQCVD--TGSQ 727 (819)
Q Consensus 667 Dl~t~~--~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg---------------~~v~~l~--~~s~ 727 (819)
|.++++ +...+.+|...|.+++|+|+++.++ +|+ .|++|++||.... +++..+. +...
T Consensus 178 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~-s~s--~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 254 (345)
T 3fm0_A 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQRLA-SCS--DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT 254 (345)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECTTSSEEE-EEE--TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC
T ss_pred EecCCCEEEEEEecCCCCceEEEEECCCCCEEE-EEe--CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc
Confidence 998875 4577889999999999999998655 444 7999999996332 1222332 5678
Q ss_pred eEEEEEccCCCEEEEEEecCCCeEEEEECCCCc----E-----EEEEecCCCCEEEEEEecCC-CEEEEEeCCCcEEEEE
Q psy10114 728 VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT----Q-----VAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWN 797 (819)
Q Consensus 728 V~sLafSpdg~~LastsGssDg~I~IWDl~s~k----~-----l~sl~gH~~~VtsLafSpDG-~~LaSGS~DGtIrIWd 797 (819)
|.+++|++++..+++ ++.|+.|++|+..... + .....+|...|++++|+|++ .+|++|+.||+|++|+
T Consensus 255 v~~v~~~~~~~~l~s--~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 255 IYDIAWCQLTGALAT--ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp EEEEEECTTTCCEEE--EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEEEEecCCCEEEE--EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 999999999999998 7789999999986542 1 12234899999999999998 5999999999999999
Q ss_pred CCCCceecccc
Q psy10114 798 VFSKVRSQRES 808 (819)
Q Consensus 798 l~s~~~~~k~~ 808 (819)
+.++++..++.
T Consensus 333 ~~~~~~~~~~~ 343 (345)
T 3fm0_A 333 YQRPEGLHHHH 343 (345)
T ss_dssp ECC--------
T ss_pred ecCCCCccccc
Confidence 99888765543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=321.82 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=227.5
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEec-c-CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-----
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDL-S-ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV----- 586 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l-~-~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t----- 586 (819)
-.+.+++|+++.+++++.|+.|++||..+++......+ . +|.+.|.+++|+|++++|++|+.||+|+|||++.
T Consensus 15 ~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~ 94 (330)
T 2hes_X 15 EKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT 94 (330)
T ss_dssp SCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------
T ss_pred CceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc
Confidence 35788899999999999999999999988654433344 3 3899999999999999999999999999999853
Q ss_pred --ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC--ccceEEEecccCCeEEEEECCCCCEEEEEECC
Q psy10114 587 --AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN--SQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660 (819)
Q Consensus 587 --gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~--~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D 660 (819)
.+.+..+.+|...|.+++| ++++|++|+.|++|++||++... ......+.+|...|.+++|+|++++|++|+.|
T Consensus 95 ~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 174 (330)
T 2hes_X 95 FEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD 174 (330)
T ss_dssp CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred ccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 4567888999999999999 57799999999999999995432 23456788999999999999999999999999
Q ss_pred CeEEEEECCCC--ceeEEEecCCCCEEEEEEcCCCC-eEEEEEccCCCCeEEEEECCCC--------ceeEEEc--CCCC
Q psy10114 661 NRLYVWNLHSM--SPLQTYTEHLAAVKAIAWSPHHH-GLLASGGGTADRCIRFWNTLTG--------QPMQCVD--TGSQ 727 (819)
Q Consensus 661 GtI~IWDl~t~--~~i~t~~~h~~~VtsLafSPdg~-~LLaSGgGs~DgtIrIWDl~tg--------~~v~~l~--~~s~ 727 (819)
++|++||..++ +++..+.+|.+.|.+++|+|++. ..+++|+ .|++|++||+.++ .....+. +...
T Consensus 175 ~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ 252 (330)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSC
T ss_pred CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEEEEecCCCccccceeEEeeecccccccc
Confidence 99999998776 67888999999999999999842 3556665 8999999998764 2333332 6778
Q ss_pred eEEEEEccCCCEEEEEEecCCCeEEEEECCCCc--EEEEE-ecCCC-CEEEEEEec--CCCEEEEEeCCCcEEEEECCC
Q psy10114 728 VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT--QVAKL-TGHSY-RVLYLAMSP--DGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 728 V~sLafSpdg~~LastsGssDg~I~IWDl~s~k--~l~sl-~gH~~-~VtsLafSp--DG~~LaSGS~DGtIrIWdl~s 800 (819)
|.+++|++++ .+++ ++.|+.|++||..+++ ..... .+|.. .|.+++|+| ++++|++|+.||+|++||+.+
T Consensus 253 v~~v~~s~~~-~l~s--~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 253 VYNVAWGFNG-LIAS--VGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEECTTS-CEEE--EETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred eEEEEEcCCC-EEEE--EeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9999999665 6666 6789999999998774 33333 57877 899999999 789999999999999999865
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=323.17 Aligned_cols=281 Identities=20% Similarity=0.342 Sum_probs=236.7
Q ss_pred eEEEEEe--------cCCeEEEEECCCeEEEEEcCCCc-----eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEE
Q psy10114 515 YLNLVDW--------SSQNVLSVGLGSCVYLWSACTSQ-----VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 515 yv~~ldw--------S~~~LLa~g~Dg~V~LWd~~tg~-----~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~I 581 (819)
.+.++.| +++.+++++.|+.|++||..+++ ......+.+|...|.+++|+|++.++++|+.||+|++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRL 102 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 4677777 45689999999999999987643 2334567899999999999999999999999999999
Q ss_pred eecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC--------
Q psy10114 582 WDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN-------- 651 (819)
Q Consensus 582 WDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg-------- 651 (819)
||+++++.+..+.+|...|.+++| +++.|++|+.|+.|++||+............+|...|.+++|+|++
T Consensus 103 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 182 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQP 182 (343)
T ss_dssp EETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCS
T ss_pred EECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCC
Confidence 999999999999999999999999 4779999999999999999743211111123788999999999987
Q ss_pred --CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC-CCceeEEEcCCCCe
Q psy10114 652 --QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL-TGQPMQCVDTGSQV 728 (819)
Q Consensus 652 --~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~-tg~~v~~l~~~s~V 728 (819)
.++++++.||.|++|| ...+....+.+|...|.+++|+|+++.+++ |+ .|+.|++||+. .+.....+..+..|
T Consensus 183 ~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s-gs--~dg~v~iwd~~~~~~~~~~~~~~~~v 258 (343)
T 2xzm_R 183 FAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIAT-GG--KDKKLLIWDILNLTYPQREFDAGSTI 258 (343)
T ss_dssp SCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEE-EE--TTCEEEEEESSCCSSCSEEEECSSCE
T ss_pred CCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEE-Ec--CCCeEEEEECCCCcccceeecCCCcE
Confidence 7999999999999999 456777888999999999999999986554 44 79999999994 45566666677889
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE--EEe-----------cCCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA--KLT-----------GHSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~--sl~-----------gH~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
.+++|+|++..+++ | .|+.|++||+.+++... .+. +|...|.+++|+|+|++|++|+.||+|++
T Consensus 259 ~~v~~sp~~~~la~--~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~ 335 (343)
T 2xzm_R 259 NQIAFNPKLQWVAV--G-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRT 335 (343)
T ss_dssp EEEEECSSSCEEEE--E-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEE
T ss_pred EEEEECCCCCEEEE--E-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEE
Confidence 99999999987765 4 57889999998765433 443 68889999999999999999999999999
Q ss_pred EECCCCc
Q psy10114 796 WNVFSKV 802 (819)
Q Consensus 796 Wdl~s~~ 802 (819)
|++.+++
T Consensus 336 w~~~~g~ 342 (343)
T 2xzm_R 336 FSFETSA 342 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEccC
Confidence 9987653
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=318.21 Aligned_cols=251 Identities=22% Similarity=0.352 Sum_probs=227.0
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|+|++|++|+.||.|++||+++++.+..+.+|...|.+++| +++.|++|+.|+.|++||++++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 56788999999999999999999999999999999999999999999999999999 6789999999999999999987
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
+ ....+.+|.+.|.+++|+|+++++++|+.|++|++||++++ .....+.+|...|.+++|+|++..++++|+ .|+
T Consensus 88 ~--~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs--~D~ 163 (304)
T 2ynn_A 88 E--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC--LDR 163 (304)
T ss_dssp C--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE--TTS
T ss_pred c--EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe--CCC
Confidence 6 45788999999999999999999999999999999999887 455778899999999999996555677766 899
Q ss_pred eEEEEECCCCceeEEEc--CCCCeEEEEEcc--CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC
Q psy10114 707 CIRFWNTLTGQPMQCVD--TGSQVCNLAWSK--HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE 782 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~--~~s~V~sLafSp--dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~ 782 (819)
+|++||++++.....+. +...+..++|++ +++.+++ |+.|+.|++||+++++.+.++.+|...|.+++|+|+++
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s--~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT--ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE--EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE--EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 99999999887766653 446789999987 6678888 78999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceecc
Q psy10114 783 AIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 783 ~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+|++|+.||+|++||+.+++..+.
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEcCCCeEEEEECCCCceeee
Confidence 999999999999999998775544
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-37 Score=334.63 Aligned_cols=280 Identities=24% Similarity=0.406 Sum_probs=244.1
Q ss_pred ceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce---
Q psy10114 514 FYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--- 588 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--- 588 (819)
..+.+++|++ +.+++++.|+.|++||..+++... .+..|...|.+++|+|+|++|++|+.|+.+++||+.+..
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~--~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH--AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD 144 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE--EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce--EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc
Confidence 3477778874 579999999999999999887654 567789999999999999999999999999999986532
Q ss_pred ----EEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEE-----ecccCCeEEEEECC-CCCEEE
Q psy10114 589 ----QVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRL-----VGHRQEVCGLKWSP-DNQYLA 655 (819)
Q Consensus 589 ----~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l-----~gH~~~VtsLafSp-dg~~La 655 (819)
....+.+|.+.|.++.|. +..|++|+.|++|++||+++++.. ..+ .+|...|.+++|++ ++++++
T Consensus 145 ~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 145 GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI--SIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE--EEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE--EEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 345678999999999994 457999999999999999987632 333 57899999999987 889999
Q ss_pred EEECCCeEEEEECC-CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC--------C
Q psy10114 656 SGGNDNRLYVWNLH-SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--------S 726 (819)
Q Consensus 656 SGS~DGtI~IWDl~-t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~--------s 726 (819)
+|+.|++|++||++ .++.+..+.+|.+.|.+++|+|++..++ +|+ .|++|++||+++++.+..+... .
T Consensus 223 sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 299 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG-TGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNELP 299 (380)
T ss_dssp EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE-EEC--SSSCEEEEETTTTEEEEEECCCCSSSCCSSC
T ss_pred EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE-EEc--CCCeEEEEECCCCcEEEEecccccccccccC
Confidence 99999999999998 5578889999999999999999998554 554 8999999999999988877432 2
Q ss_pred CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE----ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL----TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl----~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.+.+++|+|+|+.+++ |+.||.|++||..+++.+..+ .+|.+.|.+++|+|||++|++|+.||+|++|++...+
T Consensus 300 ~v~~~~~s~~g~~l~~--g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFA--GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SCSEEEECSSSSEEEE--ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ceEEEEECCCCCEEEE--EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 3889999999999999 889999999999999988887 6899999999999999999999999999999998664
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=306.45 Aligned_cols=277 Identities=23% Similarity=0.404 Sum_probs=243.2
Q ss_pred ceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
..+.+++|++ +.+++++.|+.|++|+..+++... .+.+|...|.+++|+|++++|++|+.||.|++||+++++.+.
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch--hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 3467777774 579999999999999999888655 567899999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+.+|...|.+++| +++.+++|+.||.|++||+++++ ....+..|...|.+++|+|+++++++|+.||.|++||++
T Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE--EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 99999999999999 46799999999999999998865 457788899999999999999999999999999999999
Q ss_pred CCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-CC---eEEEEEccCCCEEEEEE
Q psy10114 670 SMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-SQ---VCNLAWSKHSSELVSTH 744 (819)
Q Consensus 670 t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-s~---V~sLafSpdg~~Lasts 744 (819)
+++.+..+. .+...+..++|+|+++.+++.+ .|+.|++||+++++.+..+... .. +......+++..+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-- 254 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS-- 254 (312)
T ss_dssp TCCEEEEECCSSCCCEEEEEECTTSSEEEEEE---TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE--
T ss_pred CCceeeEEeccCCCceEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE--
Confidence 998887764 4567899999999999766644 7999999999999988877432 22 223333467777887
Q ss_pred ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe--CCCcEEEEECC
Q psy10114 745 GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA--GDETLRFWNVF 799 (819)
Q Consensus 745 GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS--~DGtIrIWdl~ 799 (819)
|+.||.|++||+.+++.+..+.+|.+.|.+++|+|+++.+++++ .|++|++|+.+
T Consensus 255 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 255 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 88999999999999999999999999999999999999999987 69999999975
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=328.95 Aligned_cols=284 Identities=17% Similarity=0.187 Sum_probs=226.4
Q ss_pred eEEEEEecCC-eEEEEECCCeEEEEEcCCCce---------EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec
Q psy10114 515 YLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQV---------TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV 584 (819)
Q Consensus 515 yv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~---------~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl 584 (819)
.+.++.|+++ .+++++.|+++++||...... ........+...|.+++|++++ .|++|+.||+|+|||+
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~ 110 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWEL 110 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEec
Confidence 4777788753 344555588888887321100 0000011235679999999985 7889999999999999
Q ss_pred CCceEEEE----EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EEEEE
Q psy10114 585 SVAKQVHK----LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YLASG 657 (819)
Q Consensus 585 ~tgk~i~t----l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~LaSG 657 (819)
++++.+.. ..+|.+.|.+++| ++++|++|+.||+|++||+++++ .+..+.+|...|.+++|++++. .+++|
T Consensus 111 ~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h~~~V~~~~~~~~~~~~l~s~ 188 (344)
T 4gqb_B 111 DENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--VLSSYRAHAAQVTCVAASPHKDSVFLSC 188 (344)
T ss_dssp CTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred cCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCcCCceEEEEecCCCCCceeee
Confidence 98865443 4589999999999 57799999999999999999865 5678899999999999999875 78999
Q ss_pred ECCCeEEEEECCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEc
Q psy10114 658 GNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWS 734 (819)
Q Consensus 658 S~DGtI~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafS 734 (819)
+.|++|++||++++++...+. .+...+.+++|+|++..++++|+ .|++|++||+++++++..+. +...|.+++|+
T Consensus 189 s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fs 266 (344)
T 4gqb_B 189 SEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD--ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFS 266 (344)
T ss_dssp ETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE--TTSEEEEEESCC--CCEEEECCSSCEEEEEEC
T ss_pred ccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec--cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 999999999999999888775 45667999999998888888876 89999999999999988875 67889999999
Q ss_pred cCCC-EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceecc
Q psy10114 735 KHSS-ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 735 pdg~-~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
|++. ++++ |+.|+.|++||..+++. ..+.+|.+.|++++|+|+|+ +|++|+.||+|++|++.++.....
T Consensus 267 p~g~~~las--gs~D~~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~~p 337 (344)
T 4gqb_B 267 PHSVPFLAS--LSEDCSLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPAP 337 (344)
T ss_dssp SSSSCCEEE--EETTSCEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC------
T ss_pred cCCCeEEEE--EeCCCeEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCCCC
Confidence 9985 5666 78999999999988765 46789999999999999986 577999999999999987655443
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=311.36 Aligned_cols=278 Identities=20% Similarity=0.294 Sum_probs=241.7
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+.+++|+ ++.+++++.|+.|++||..+++... .+..|...|.+++|++++++|++|+.||+|++||+++++.+..
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE--EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE
Confidence 36666776 4679999999999999999887544 5667889999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECC
Q psy10114 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 593 l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~ 669 (819)
+.+|...|.+++| ++.+|++|+.||+|++||++++. .....+.+|...|.+++|+| ++..|++|+.|++|++||++
T Consensus 93 ~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred EeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 9999999999999 46799999999999999998764 24567889999999999999 67899999999999999998
Q ss_pred CCceeEEEe-cCCCCEEEEEEcC--CCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEe
Q psy10114 670 SMSPLQTYT-EHLAAVKAIAWSP--HHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 670 t~~~i~t~~-~h~~~VtsLafSP--dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsG 745 (819)
++.+...+. +|...+..++|+| ++. ++++|+ .|++|++||+++++++..+. +...|.+++|+|+++.+++ |
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s--~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s--~ 246 (304)
T 2ynn_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS--G 246 (304)
T ss_dssp CSSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE--E
T ss_pred CCCccceeccCCcCcEEEEEEEEcCCCC-EEEEEc--CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE--E
Confidence 887766665 4668899999987 444 555655 89999999999999988875 6788999999999999998 8
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC--EEEEEeCCCcEEEEECCCC
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE--AIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~--~LaSGS~DGtIrIWdl~s~ 801 (819)
+.|+.|++||..+++.+..+..|...+.+++|+|+|. ++++|+.| .+.+|++.+.
T Consensus 247 s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred cCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 8999999999999999999999999999999999875 57777655 5778887653
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=304.77 Aligned_cols=284 Identities=22% Similarity=0.367 Sum_probs=247.6
Q ss_pred cceEEEEEecC---CeEEEEECCCeEEEEEcCCCc---eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 513 DFYLNLVDWSS---QNVLSVGLGSCVYLWSACTSQ---VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 513 Dfyv~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~---~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
.-.|++++|++ +.+++++.|++|++||+.+++ ......+.+|.+.|.+++|+|+|++|++|+.||.|++|+...
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~ 117 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 117 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecc
Confidence 34688889884 468899999999999987654 234556788999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCC--CEEEEEECCCe
Q psy10114 587 AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN--QYLASGGNDNR 662 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg--~~LaSGS~DGt 662 (819)
.........+...+....+ +++.+++|+.|+.+++||..... .......+|...+..++|++++ ..+++++.|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~ 196 (340)
T 4aow_A 118 GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC-KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL 196 (340)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc-eEEEEeccccCcccceEEccCCCCcEEEEEcCCCE
Confidence 9999999999999998888 57799999999999999997754 3345567899999999998864 57899999999
Q ss_pred EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEE
Q psy10114 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Las 742 (819)
|++||+++++.+..+.+|.+.|.+++|+|+++.+++ |+ .|+.|++||+++++.+..+.....+.+++|+|++..+++
T Consensus 197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCAS-GG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCA 273 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EE--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEE-Ee--CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeec
Confidence 999999999999999999999999999999986554 44 799999999999999999999999999999999876554
Q ss_pred EEecCCCeEEEEECCCCcEEEEEe---------cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLT---------GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~---------gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+.|+.|++||++++..+..+. +|...|++++|+|||++|++|+.||.|++||+.+|++
T Consensus 274 ---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 274 ---ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp ---EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred ---cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 468999999999887776654 6888999999999999999999999999999998864
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=305.62 Aligned_cols=285 Identities=14% Similarity=0.226 Sum_probs=253.6
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
-.+.++.|+ ++.+++++.|+.|++||..+++... .+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG--TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh--hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 346777776 4579999999999999999987654 577899999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCC-----CeEEEEECCCCCcc---------ceEEEecccC--CeEEEEECCCCCE
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRD-----RMILQRDVRTPNSQ---------SERRLVGHRQ--EVCGLKWSPDNQY 653 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~D-----GtI~IWDi~t~~~~---------~v~~l~gH~~--~VtsLafSpdg~~ 653 (819)
.+. +...|.+++| +++.+++++.+ |.|.+||++..... ....+..|.. .+.+++|+|+++.
T Consensus 111 ~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 111 TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence 888 8899999999 57799999988 99999999876431 2344556666 8999999999999
Q ss_pred EEEEECCCeEEEEECCC-CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEE
Q psy10114 654 LASGGNDNRLYVWNLHS-MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLA 732 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t-~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLa 732 (819)
+++|+.||.|++||+++ ++.+..+..|...|.+++|+|++..+++++ .|+.|++||+++++.+..+.....+..++
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS---RDTNSFLVDVSTLQVLKKYETDCPLNTAV 266 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec---CCceEEEEECCCCceeeeecCCCCceeEE
Confidence 99999999999999998 788899999999999999999998766544 79999999999999999999999999999
Q ss_pred EccCCCEEEEEEecCCC--------------eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 733 WSKHSSELVSTHGYSQN--------------QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 733 fSpdg~~LastsGssDg--------------~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
|+|+++.+++ +..++ .+++||..+++.+..+.+|...|.+++|+|+|++|++|+.||.|++|++
T Consensus 267 ~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 267 ITPLKEFIIL--GGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp ECSSSSEEEE--EECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred ecCCCceEEE--eecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 9999999999 55555 8999999999999999999999999999999999999999999999999
Q ss_pred CCCceecc
Q psy10114 799 FSKVRSQR 806 (819)
Q Consensus 799 ~s~~~~~k 806 (819)
.++....+
T Consensus 345 ~~~~~~~~ 352 (369)
T 3zwl_B 345 EKSYFDFK 352 (369)
T ss_dssp CHHHHTCC
T ss_pred ccccchhH
Confidence 87654433
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=323.54 Aligned_cols=286 Identities=19% Similarity=0.265 Sum_probs=228.4
Q ss_pred CcceEEEEEecC--CeEEEEEC------CCeEEEEEcCCCceEE--EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEE
Q psy10114 512 DDFYLNLVDWSS--QNVLSVGL------GSCVYLWSACTSQVTR--LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 512 dDfyv~~ldwS~--~~LLa~g~------Dg~V~LWd~~tg~~~~--l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~I 581 (819)
.+-.+++++|++ +.+++++. |+.|++|+..++.... .....+|...|++++|+|++. +++++.||+|+|
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~l 119 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVEL 119 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEE
Confidence 345678888874 57888887 6789999987764321 112235778899999999985 556788999999
Q ss_pred eecCCceEEE----EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EE
Q psy10114 582 WDVSVAKQVH----KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YL 654 (819)
Q Consensus 582 WDl~tgk~i~----tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~L 654 (819)
||+.+++... ...+|...|.+++| ++++|++|+.||.|++||+++++ ....+.+|...|.+++|+++++ .+
T Consensus 120 Wd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 120 WEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp C--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTCSSCE
T ss_pred eeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCcee
Confidence 9998876543 34589999999999 57799999999999999998865 4577889999999999999875 78
Q ss_pred EEEECCCeEEEEECCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEE
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNL 731 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sL 731 (819)
++++.||+|++||++++++...+. .+...+.+++|+|++..++++|+ .|+.|++||+++++.+..+. +...|.++
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD--ETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE--SSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee--cccceeEEECCCCcEeEEEeccceeEEEE
Confidence 999999999999999988776554 56778999999999888888876 89999999999999888875 56789999
Q ss_pred EEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec-CCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 732 AWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP-DGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 732 afSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp-DG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+|+|++. ++++ |+.|+.|++||+++++.+.. .+|.+.|++++|+| |+++|+||+.||+|++|++.+..+..
T Consensus 276 ~~sp~~~~~las--gs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 276 AYSYHSSPFLAS--ISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp EECSSSSCCEEE--EETTSCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred EEcCCCCCEEEE--EeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 9999985 5666 77899999999998877755 48999999999998 89999999999999999997654433
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=316.27 Aligned_cols=279 Identities=23% Similarity=0.405 Sum_probs=233.0
Q ss_pred eEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEecc----------------CCCCCeEEEEEcCCCCEEEEEecCc
Q psy10114 515 YLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLS----------------ADGNSVTSVAWNERGNLVAVGTHHG 577 (819)
Q Consensus 515 yv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~----------------~h~~~VtsLafSpdG~~LAsGs~DG 577 (819)
.+.+++|+++ .+++++.++.+++|+..+++........ .+...|++++|+|+|++|++|+.||
T Consensus 66 ~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~ 145 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDR 145 (393)
T ss_dssp CCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCC
Confidence 4566777743 3444456899999999998765432211 1122499999999999999999999
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEE
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYL 654 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~L 654 (819)
.|++||+++++.+..+.+|...|.+++| +++.|++|+.|++|++||+++++. ...+ .+...+.+++|+| +++++
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTL-SIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEE-ECSSCEEEEEECSTTCCEE
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEE-EcCCCcEEEEEECCCCCEE
Confidence 9999999999999999999999999999 577999999999999999988653 2333 3667899999999 89999
Q ss_pred EEEECCCeEEEEECCCCceeEEE-------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc----------
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTY-------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ---------- 717 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~-------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~---------- 717 (819)
++|+.||.|++||+++++.+..+ .+|...|.+++|+|+++.++ +|+ .|++|++||++++.
T Consensus 223 ~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s--~d~~v~~wd~~~~~~~~~~~~~~~ 299 (393)
T 1erj_A 223 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGS--LDRSVKLWNLQNANNKSDSKTPNS 299 (393)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE-EEE--TTSEEEEEEC--------------
T ss_pred EEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE-EEe--CCCEEEEEECCCCCCcccccCCCC
Confidence 99999999999999999887776 57899999999999998665 444 89999999998643
Q ss_pred --eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec------CCCEEEEEe
Q psy10114 718 --PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP------DGEAIVTGA 788 (819)
Q Consensus 718 --~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp------DG~~LaSGS 788 (819)
+...+ .+...|.+++|+++++++++ |+.|+.|++||..+++.+..+.+|...|.+++|++ ++++|++|+
T Consensus 300 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s--gs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 300 GTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp -CEEEEEECCSSCEEEEEECGGGCEEEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CcceEEEecccCcEEEEEECCCCCEEEE--EeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 22222 56778999999999999998 88999999999999999999999999999999986 688999999
Q ss_pred CCCcEEEEECCCC
Q psy10114 789 GDETLRFWNVFSK 801 (819)
Q Consensus 789 ~DGtIrIWdl~s~ 801 (819)
.||+|++|++...
T Consensus 378 ~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 378 GDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEEEEEC
T ss_pred CCCcEEECccccc
Confidence 9999999998643
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=315.66 Aligned_cols=284 Identities=15% Similarity=0.205 Sum_probs=249.2
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCc----eEEEEeccCCCCCeEEEEEcCC----C---CEEEEEecCceEEE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQ----VTRLCDLSADGNSVTSVAWNER----G---NLVAVGTHHGYVQV 581 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~----~~~l~~l~~h~~~VtsLafSpd----G---~~LAsGs~DGtI~I 581 (819)
.-.+.+++|+++.+++++.|+.|++||..+++ ......+.+|...|++++|+++ | ++|++|+.||.|++
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~i 95 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 95 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEE
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEE
Confidence 34688899999999999999999999999887 1112345678999999999999 9 99999999999999
Q ss_pred eecCCceE-----EEEEecC-----CCCeEEEEeC------Cce-eeeccCCCeEEEEECCC------CCccc---eEEE
Q psy10114 582 WDVSVAKQ-----VHKLVGH-----TARVGALAWN------GDM-LSSGSRDRMILQRDVRT------PNSQS---ERRL 635 (819)
Q Consensus 582 WDl~tgk~-----i~tl~gH-----s~~V~sLawn------g~~-LaSGS~DGtI~IWDi~t------~~~~~---v~~l 635 (819)
||+.+++. +..+.+| ...|.+++|+ ++. |++|+.||.|++||++. .+... ...+
T Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 175 (397)
T 1sq9_A 96 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 175 (397)
T ss_dssp EEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred EEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee
Confidence 99998887 8889988 5999999997 567 99999999999999987 44321 0144
Q ss_pred -------ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec---C---CCCEEEEEEcCCCCeEEEEEcc
Q psy10114 636 -------VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE---H---LAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 636 -------~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~---h---~~~VtsLafSPdg~~LLaSGgG 702 (819)
..|...|.+++|+|++ .+++|+.||.|++||+++++++..+.. | ...|.+++|+|++..+++.+
T Consensus 176 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-- 252 (397)
T 1sq9_A 176 QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-- 252 (397)
T ss_dssp EEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE--
T ss_pred eeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe--
Confidence 4488999999999999 999999999999999999999999998 8 99999999999998666544
Q ss_pred CCC---CeEEEEECCCCceeEEEc--------------CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 703 TAD---RCIRFWNTLTGQPMQCVD--------------TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 703 s~D---gtIrIWDl~tg~~v~~l~--------------~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
.| +.|++||+++++.+..+. +...|.+++|+|+++.+++ ++.|+.|++||+.+++.+..+
T Consensus 253 -~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 253 -DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS--AGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp -EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE--EETTSEEEEEETTTTEEEEEE
T ss_pred -cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE--EeCCCeEEEEEcCCCceeEEE
Confidence 68 999999999999888885 6788999999999999998 779999999999999999999
Q ss_pred e------cC---------------CCCEEEEEEecCC----------CEEEEEeCCCcEEEEECCCCc
Q psy10114 766 T------GH---------------SYRVLYLAMSPDG----------EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 766 ~------gH---------------~~~VtsLafSpDG----------~~LaSGS~DGtIrIWdl~s~~ 802 (819)
. +| ...|.+++|+|+| ++|++|+.||.|++||+.+++
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 330 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp ECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9 88 9999999999998 799999999999999998763
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=297.09 Aligned_cols=274 Identities=22% Similarity=0.278 Sum_probs=238.1
Q ss_pred eEEEEEecC--CeEEEEECCCeEEEEEcCCCceE---EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-
Q psy10114 515 YLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVT---RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK- 588 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~---~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk- 588 (819)
.+.++.|++ +.+++++ |+.|++||..+++.. ......+|...|.+++|+|++++|++|+.||.|++||+++++
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP 131 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc
Confidence 455666664 4566666 999999999876421 222333688999999999999999999999999999999887
Q ss_pred -EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 589 -QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 589 -~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
....+.+|...|.+++| +++.+++++.||.|++||+++++ ....+.+|...|.+++|+|+++.+++++.||.|++
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 209 (337)
T 1gxr_A 132 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRS 209 (337)
T ss_dssp EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--eeeeeecccCceEEEEECCCCCEEEEEecCCcEEE
Confidence 67778899999999999 56799999999999999998865 45677889999999999999999999999999999
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
||+++++.+..+. +...+.+++|+|+++.+++.+ .|+.|++||+++++......+...+.+++|+|+++.+++ +
T Consensus 210 ~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~---~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~ 283 (337)
T 1gxr_A 210 WDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM---ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--T 283 (337)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE--E
T ss_pred EECCCCceEeeec-CCCceEEEEECCCCCEEEEEc---CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEE--e
Confidence 9999998887775 788899999999998766544 799999999999988776678889999999999999998 7
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
+.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|++
T Consensus 284 ~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 284 GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 78999999999999888554 58889999999999999999999999999996
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=321.47 Aligned_cols=249 Identities=23% Similarity=0.367 Sum_probs=229.1
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|++++|++|+.||+|+|||+.+++...++.+|...|.+++| ++++|++|+.||+|++||+.+.
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 35679999999999999999999999999999999999999999999999999999 4779999999999999999876
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
+ ....+.+|...|.+++|+|+++++++|+.|++|++||+++++++..+.+|...|.+++++|++..+++ |+ .|++
T Consensus 183 ~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s-~s--~D~~ 257 (410)
T 1vyh_C 183 E--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS-CS--NDQT 257 (410)
T ss_dssp C--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE-EE--TTSC
T ss_pred c--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE-Ec--CCCe
Confidence 5 45778899999999999999999999999999999999999999999999999999999999985554 44 7999
Q ss_pred EEEEECCCCceeEEE-cCCCCeEEEEEccC--------------------CCEEEEEEecCCCeEEEEECCCCcEEEEEe
Q psy10114 708 IRFWNTLTGQPMQCV-DTGSQVCNLAWSKH--------------------SSELVSTHGYSQNQILVWKYPTLTQVAKLT 766 (819)
Q Consensus 708 IrIWDl~tg~~v~~l-~~~s~V~sLafSpd--------------------g~~LastsGssDg~I~IWDl~s~k~l~sl~ 766 (819)
|++||+.+++....+ .+...|.+++|+|+ |..+++ |+.|+.|++||+.+++.+..+.
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s--gs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS--GSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE--EETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE--EeCCCeEEEEECCCCceEEEEE
Confidence 999999999988777 46778999999996 567777 8899999999999999999999
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 767 GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 767 gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+|...|.+++|+|+|++|++|+.||+|++||+.+++...
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 999999999999999999999999999999998876543
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=323.37 Aligned_cols=268 Identities=29% Similarity=0.519 Sum_probs=237.9
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+..+.++ ++.+++++.|+.|++||..+.+.. .+.+|...|.+++|+|+|+.|++|+.||.|++||. +++.+..
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~ 380 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ---TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 380 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE---EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEE
Confidence 35556665 568999999999999998766543 46678899999999999999999999999999995 6788899
Q ss_pred EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
+.+|...|.+++| +++.|++|+.|+.|++||... .....+.+|...|.+++|+||+++|++++.|+.|++||. +
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~ 456 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-N 456 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-T
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-C
Confidence 9999999999999 577999999999999999643 346778899999999999999999999999999999996 5
Q ss_pred CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 671 ~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
++.+..+.+|...|.+++|+|+++.++++ + .|+.|++||. +++.+..+ .+...|.+++|+|+|++|++ ++.|+
T Consensus 457 ~~~~~~~~~~~~~v~~~~~spd~~~las~-~--~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s--~~~dg 530 (577)
T 2ymu_A 457 GQLLQTLTGHSSSVRGVAFSPDGQTIASA-S--DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS--ASDDK 530 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSCEEEEE-E--TTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEE--EETTS
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEE-e--CCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEE--EECcC
Confidence 67888999999999999999999966554 3 7999999995 56766666 46788999999999999998 77999
Q ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
.|++||. +++.+..+.+|.+.|++++|+|||++|+|++.|++|++||
T Consensus 531 ~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 531 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999995 6889999999999999999999999999999999999997
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=335.62 Aligned_cols=282 Identities=19% Similarity=0.298 Sum_probs=236.8
Q ss_pred ceEEEEEecCC---eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 514 FYLNLVDWSSQ---NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 514 fyv~~ldwS~~---~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
-.+.+++|+++ .+++++.|+.|++||..+++.. ..+.+|.+.|.+++|+|+|++||+|+.||+|++||+.+++.+
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 225 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe--eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEe
Confidence 45788888864 5999999999999998877654 467889999999999999999999999999999999999998
Q ss_pred EEEe-------cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc-------------------------------
Q psy10114 591 HKLV-------GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ------------------------------- 630 (819)
Q Consensus 591 ~tl~-------gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~------------------------------- 630 (819)
..+. +|.+.|.+++| ++++|++|+.|++|++||+++++..
T Consensus 226 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~ 305 (611)
T 1nr0_A 226 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 305 (611)
T ss_dssp EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCC
T ss_pred eeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCc
Confidence 8884 79999999999 5779999999999999999875421
Q ss_pred ----------ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE-e---------------------
Q psy10114 631 ----------SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY-T--------------------- 678 (819)
Q Consensus 631 ----------~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~-~--------------------- 678 (819)
....+.+|...|.+++|+|+|++|++++.|++|++||+.+++....+ .
T Consensus 306 i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 385 (611)
T 1nr0_A 306 INFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 385 (611)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE
Confidence 12345689999999999999999999999999999999876542221 0
Q ss_pred ------------------------------------------------------------cCCCCEEEEEEcCCCCeEEE
Q psy10114 679 ------------------------------------------------------------EHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 679 ------------------------------------------------------------~h~~~VtsLafSPdg~~LLa 698 (819)
.|...+.+++|+|+|+.+ +
T Consensus 386 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~l-a 464 (611)
T 1nr0_A 386 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFV-A 464 (611)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEE-E
T ss_pred cCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEE-E
Confidence 123457789999999855 4
Q ss_pred EEccCCCCeEEEEECCCCce--eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEE--EecCCCCEE
Q psy10114 699 SGGGTADRCIRFWNTLTGQP--MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAK--LTGHSYRVL 773 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~tg~~--v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~s--l~gH~~~Vt 773 (819)
+|+ .|++|++||+.+++. .....+...|.+++|+|+|+++++ ++.|+.|++||+.+ ++.... +.+|...|.
T Consensus 465 sgs--~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las--~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 465 VGG--QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVA--TDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp EEE--TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred EeC--CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEE--EcCCCCEEEEEcCCCCceeeeeeeeeccccee
Confidence 544 899999999987653 344567889999999999999999 78999999999987 554433 335999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 774 YLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 774 sLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+++|+|||++|++|+.|++|++||+.++.
T Consensus 541 ~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 541 CVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred EEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 99999999999999999999999998765
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=332.00 Aligned_cols=271 Identities=19% Similarity=0.365 Sum_probs=233.9
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--eEEEEEecCCCC
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--KQVHKLVGHTAR 599 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--k~i~tl~gHs~~ 599 (819)
+++.+++++ ++.|++|+..+++... .+.+|.+.|++++|+|+|++||+|+.||+|+|||+.++ .....+.+|.+.
T Consensus 29 dg~~l~~~~-~~~v~l~~~~~~~~~~--~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~ 105 (611)
T 1nr0_A 29 AGDKIQYCN-GTSVYTVPVGSLTDTE--IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP 105 (611)
T ss_dssp TSSEEEEEE-TTEEEEEETTCSSCCE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSC
T ss_pred CCCEEEeCC-CCEEEEecCCCcccCe--EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCc
Confidence 455677665 6799999998776544 56789999999999999999999999999999999754 456678899999
Q ss_pred eEEEEe--CCceeeeccCC----CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EEEEEECCCeEEEEECCCCc
Q psy10114 600 VGALAW--NGDMLSSGSRD----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 600 V~sLaw--ng~~LaSGS~D----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~LaSGS~DGtI~IWDl~t~~ 672 (819)
|.+++| +++.|++++.+ +.|++||... ....+.+|...|.+++|+|++. .|++|+.|++|++||..+++
T Consensus 106 v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~----~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 106 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGT----SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp EEEEEECTTSCEEEEEECCSSCSEEEEETTTCC----BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred eEEEEECCCCCEEEEEECCCCceeEEEEeeCCC----CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 999999 46688887765 4788888432 3356789999999999999987 69999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--------cCCCCeEEEEEccCCCEEEEEE
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--------DTGSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--------~~~s~V~sLafSpdg~~Lasts 744 (819)
....+.+|...|.+++|+|+++.++ +++ .|++|++||..+++.+..+ .|...|.+++|+|+|+.+++
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~la-s~s--~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s-- 256 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFA-STG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS-- 256 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEE-EEE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE--
T ss_pred EeeeeccccCceEEEEECCCCCEEE-EEE--CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEE--
Confidence 9999999999999999999998554 544 7999999999999988877 46788999999999999998
Q ss_pred ecCCCeEEEEECCCCcEEE-------------------------------------------EEecCCCCEEEEEEecCC
Q psy10114 745 GYSQNQILVWKYPTLTQVA-------------------------------------------KLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 745 GssDg~I~IWDl~s~k~l~-------------------------------------------sl~gH~~~VtsLafSpDG 781 (819)
++.|+.|++||+.+++.+. .+.+|...|++++|+|||
T Consensus 257 ~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg 336 (611)
T 1nr0_A 257 ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG 336 (611)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred EeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC
Confidence 7799999999998876544 335789999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCcee
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
++|++|+.|++|++||+.+++..
T Consensus 337 ~~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 337 KTLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEE
T ss_pred CEEEEEeCCCcEEEEECCCCcee
Confidence 99999999999999999987654
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=290.23 Aligned_cols=276 Identities=17% Similarity=0.250 Sum_probs=240.5
Q ss_pred eEEEEEe-cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc---eEE
Q psy10114 515 YLNLVDW-SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---KQV 590 (819)
Q Consensus 515 yv~~ldw-S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---k~i 590 (819)
.+.++.| +++.+++++.||.|++||..+++... .+..|.+.|.+++|+|+++++++|+.||.|++|++... +.+
T Consensus 20 ~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 20 DVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGT--VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp CEEEEEEEETTEEEEEETTSEEEEEEESSSEEEE--EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-
T ss_pred CcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEE--EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc
Confidence 3555555 46789999999999999998876554 45567899999999999999999999999999998654 668
Q ss_pred EEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECC
Q psy10114 591 HKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 591 ~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~ 669 (819)
..+.+|...|.+++|+++.+++|+.||.|++|| . ......+..|...+.+++|++ +++.+++++.||.|++||
T Consensus 98 ~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d-- 171 (313)
T 3odt_A 98 YTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--E--GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ-- 171 (313)
T ss_dssp CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--T--TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--
T ss_pred cchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--C--CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--
Confidence 888999999999999999999999999999999 2 235677889999999999988 999999999999999999
Q ss_pred CCceeEEEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecC
Q psy10114 670 SMSPLQTYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 670 t~~~i~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGss 747 (819)
..+....+.. |...|.+++|+|++. +++++ .|+.|++||+++++.+..+. +...+.+++|+|++ .+++ ++.
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~--~~~ 244 (313)
T 3odt_A 172 NDKVIKTFSGIHNDVVRHLAVVDDGH--FISCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVS--CGE 244 (313)
T ss_dssp TTEEEEEECSSCSSCEEEEEEEETTE--EEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEE--EET
T ss_pred cCceEEEEeccCcccEEEEEEcCCCe--EEEcc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEE--Eec
Confidence 5566777777 899999999999988 44444 79999999999999988885 67889999999999 4666 778
Q ss_pred CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
|+.|++||+.+++.+..+..|...|.+++|+|+|+ +++++.||.|++||+.+++...+
T Consensus 245 dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 245 DRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred CCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 99999999999999999999999999999999998 66799999999999988765443
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=312.36 Aligned_cols=244 Identities=20% Similarity=0.267 Sum_probs=209.1
Q ss_pred ceEEEEEecC-CeEEEEECCCeEEEEEcCCCceEEE--EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 514 FYLNLVDWSS-QNVLSVGLGSCVYLWSACTSQVTRL--CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 514 fyv~~ldwS~-~~LLa~g~Dg~V~LWd~~tg~~~~l--~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
..+.++.|++ +.+++++.||.|+|||+.+++.... ....+|.+.|++++|+|+|++|++|+.||+|++||+++++.+
T Consensus 83 ~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 83 AGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp SCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 3588899986 4799999999999999998875433 335689999999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEeC--C-ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEE
Q psy10114 591 HKLVGHTARVGALAWN--G-DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVW 666 (819)
Q Consensus 591 ~tl~gHs~~V~sLawn--g-~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IW 666 (819)
.++.+|...|.+++|+ + ..+++|+.||+|++||+++++.........|...+.+++|+|+ ++++++|+.||+|++|
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLV 242 (344)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEE
Confidence 9999999999999994 3 4789999999999999998775433334556778999999994 5788999999999999
Q ss_pred ECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec
Q psy10114 667 NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 667 Dl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs 746 (819)
|+++++++.++.+|...|.+++|+|++..++++|+ .|++|++||+++++.+....|...|.+++|+|+++.++++ ++
T Consensus 243 d~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs--~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas-~s 319 (344)
T 4gqb_B 243 DTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS--EDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTT-VG 319 (344)
T ss_dssp ESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE--TTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEE-EE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe--CCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEE-Ec
Confidence 99999999999999999999999999987788876 8999999999999988777888999999999999876543 67
Q ss_pred CCCeEEEEECCCCc
Q psy10114 747 SQNQILVWKYPTLT 760 (819)
Q Consensus 747 sDg~I~IWDl~s~k 760 (819)
.|++|++|++++..
T Consensus 320 ~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 320 WDHQVVHHVVPTEP 333 (344)
T ss_dssp TTSCEEEEECCC--
T ss_pred CCCeEEEEECCCCC
Confidence 89999999998654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=302.46 Aligned_cols=251 Identities=23% Similarity=0.362 Sum_probs=225.6
Q ss_pred EeccCCCCCeEEEEEcCC----CCEEEEEecCceEEEeecCCceE--EEEEecCCCCeEEEEe--CCceeeeccCCCeEE
Q psy10114 549 CDLSADGNSVTSVAWNER----GNLVAVGTHHGYVQVWDVSVAKQ--VHKLVGHTARVGALAW--NGDMLSSGSRDRMIL 620 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpd----G~~LAsGs~DGtI~IWDl~tgk~--i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~ 620 (819)
....+|.+.|.+++|+++ +.+|++|+.||+|+|||+.+++. ...+.+|...|.+++| ++..+++|+.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 356789999999999974 67999999999999999987654 4568899999999999 466999999999999
Q ss_pred EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEE
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSG 700 (819)
+||+++++ ....+..|...+.+++|+|++++|++|+.||.|++||+++++....+..+...|.+++|+|+++.+++ |
T Consensus 106 lWd~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las-g 182 (321)
T 3ow8_A 106 LWDLENGK--QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS-G 182 (321)
T ss_dssp EEETTTTE--EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE-E
T ss_pred EEECCCCC--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE-E
Confidence 99998865 45677888899999999999999999999999999999999999999999999999999999996655 4
Q ss_pred ccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec
Q psy10114 701 GGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 701 gGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp 779 (819)
+ .|+.|++||+++++.+..+. +...|.+++|+|+++.+++ |+.|+.|++||+++++....+.+|...|.+++|+|
T Consensus 183 ~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 183 A--IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT--ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp E--TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE--ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred c--CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE--EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence 3 79999999999999988885 5678999999999999998 88999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+|++|++|+.||+|++||+.+++....
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 999999999999999999998876544
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=331.80 Aligned_cols=281 Identities=22% Similarity=0.373 Sum_probs=241.3
Q ss_pred cceEEEEEecC---CeEEEEECCCeEEEEEcCCCce---EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 513 DFYLNLVDWSS---QNVLSVGLGSCVYLWSACTSQV---TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 513 Dfyv~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~---~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
.-.+.+++|+. +.+++++.|+.|++|+..+... .....+.+|...|.+++|+|+|++|++|+.||+|+|||+.+
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 34578888874 4689999999999999876431 23346778999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccce-EEEecccCCeEEEEECCCC--CEEEEEECCC
Q psy10114 587 AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSE-RRLVGHRQEVCGLKWSPDN--QYLASGGNDN 661 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v-~~l~gH~~~VtsLafSpdg--~~LaSGS~DG 661 (819)
++.++.+.+|...|.+++| +++.|++|+.|++|++||......... ....+|...|.+++|+|++ ..+++|+.|+
T Consensus 462 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~ 541 (694)
T 3dm0_A 462 GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 541 (694)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC
Confidence 9999999999999999999 577999999999999999865331111 1124688899999999986 5899999999
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~La 741 (819)
+|++||+++++....+.+|.+.|.+++|+|+++.++ +|+ .|++|++||+++++.+..+.....+.+++|+|++..++
T Consensus 542 ~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~-sg~--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA-SGG--KDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEE--TTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEE-EEe--CCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 999999999999999999999999999999998555 444 79999999999999998888888999999999998887
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCC-------------------CCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 742 STHGYSQNQILVWKYPTLTQVAKLTGHS-------------------YRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 742 stsGssDg~I~IWDl~s~k~l~sl~gH~-------------------~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+ + .++.|++||+.+++.+..+..+. ..+++++|+|||++|++|+.||+|++|++.
T Consensus 619 ~--~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 619 A--A-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp E--E-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred E--E-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 6 3 46779999999998887775332 137899999999999999999999999985
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=304.25 Aligned_cols=276 Identities=15% Similarity=0.258 Sum_probs=244.9
Q ss_pred cceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 513 DFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 513 Dfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
.-.+.++.|++ +.+++++.|+.|++|| .+++.. ..+..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 33577788874 5799999999999999 445443 356788999999999999999999999999999999999999
Q ss_pred EEEecCCCC---------------eEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE
Q psy10114 591 HKLVGHTAR---------------VGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 591 ~tl~gHs~~---------------V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L 654 (819)
..+..+... +.+++| .++.+++++.||.|++||+++++ ....+.+|...|.+++|+|++++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKT--PTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSS--CSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCc--eeeeeccCCCceEEEEECCCCCEE
Confidence 999888776 888999 46689999999999999999865 446778999999999999999999
Q ss_pred EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEE
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAW 733 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLaf 733 (819)
++++.||.|++||+++++.+..+..|...|.+++|+|++ .+++++ .|+.|++||+++++.+..+. +...+.+++|
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 338 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCS--MDGSVRLWSLKQNTLLALSIVDGVPIFAGRI 338 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEE--TTSEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred EEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEe--CCCcEEEEECCCCcEeEecccCCccEEEEEE
Confidence 999999999999999999999999999999999999999 455554 79999999999999888775 4778999999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCc--------------------EEEEEecCCC--CEEEEEEecCCCEEEEEeCCC
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLT--------------------QVAKLTGHSY--RVLYLAMSPDGEAIVTGAGDE 791 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k--------------------~l~sl~gH~~--~VtsLafSpDG~~LaSGS~DG 791 (819)
+|+++.+++ ++.||.|++||+.+++ .+..+.+|.. .|.+++|+|+|++|++|+.||
T Consensus 339 s~~~~~l~~--~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 339 SQDGQKYAV--AFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp CTTSSEEEE--EETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred cCCCCEEEE--EECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 999999998 7789999999999888 8899999976 999999999999999999999
Q ss_pred cEEEEECC
Q psy10114 792 TLRFWNVF 799 (819)
Q Consensus 792 tIrIWdl~ 799 (819)
.|++||+.
T Consensus 417 ~i~iw~~~ 424 (425)
T 1r5m_A 417 EGSVVAIP 424 (425)
T ss_dssp CCEEEECC
T ss_pred eEEEEeec
Confidence 99999986
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=315.95 Aligned_cols=272 Identities=15% Similarity=0.359 Sum_probs=237.1
Q ss_pred ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC----ceEEEEEecCCCCeEEEEe
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV----AKQVHKLVGHTARVGALAW 605 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t----gk~i~tl~gHs~~V~sLaw 605 (819)
+.|+.|++||..+++..+......|...|++++|+|++++|++|+.||.|++||+.+ .+.+..+.+|...|.+++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 788999999998875322222235788999999999999999999999999999987 4588889999999999999
Q ss_pred C---CceeeeccCCCeEEEEECCCCC------cc-ceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCcee
Q psy10114 606 N---GDMLSSGSRDRMILQRDVRTPN------SQ-SERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHSMSPL 674 (819)
Q Consensus 606 n---g~~LaSGS~DGtI~IWDi~t~~------~~-~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t~~~i 674 (819)
+ +++|++|+.||.|++||+++.+ .. ......+|...|.+++|+|+ +..+++++.||.|++||+++++.+
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 4 6799999999999999998865 21 12234678999999999998 789999999999999999999999
Q ss_pred EEEecC------CCCEEEEEEcCCCCeEEEEEccCCCC---eEEEEECCCC-ceeEEEc--CCCCeEEEEEcc-CCCEEE
Q psy10114 675 QTYTEH------LAAVKAIAWSPHHHGLLASGGGTADR---CIRFWNTLTG-QPMQCVD--TGSQVCNLAWSK-HSSELV 741 (819)
Q Consensus 675 ~t~~~h------~~~VtsLafSPdg~~LLaSGgGs~Dg---tIrIWDl~tg-~~v~~l~--~~s~V~sLafSp-dg~~La 741 (819)
..+..+ ...|.+++|+|++..++++++ .|+ .|++||++++ +.+..+. +...|.+++|+| +++.++
T Consensus 202 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 202 IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT--GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE--CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE
T ss_pred eEEeccccccccCCceEEEEECCCCCCEEEEEE--CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE
Confidence 888876 789999999999876777765 677 9999999986 5566664 678899999999 889998
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC-CEEEEEeCCCcEEEEECCCCceec
Q psy10114 742 STHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 742 stsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG-~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+ ++.|+.|++||+.+++.+..+.+|...|.+++|+|++ ++|++++.||.|++||+.+.....
T Consensus 280 s--~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 280 S--SGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp E--EESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred E--EeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 8 7789999999999999999999999999999999999 899999999999999998876543
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=301.78 Aligned_cols=283 Identities=15% Similarity=0.208 Sum_probs=239.4
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+.++.|+ ++.+++++.|+.|++||..+++...+..+.+|.+.|++++|+|++++|++|+.||.|++||+++++.....
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE
Confidence 4556665 45788888999999999999875566677889999999999999999999999999999999988765544
Q ss_pred --ecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc--ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 594 --VGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ--SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 594 --~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~--~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
.+|...|.+++| +++.+++|+.||.|++||++..... ......+|...|.+++|+|+++++++|+.||.|++||
T Consensus 91 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 91 VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 679999999999 5779999999999999999886632 1223356889999999999999999999999999999
Q ss_pred C------------------CCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCe
Q psy10114 668 L------------------HSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQV 728 (819)
Q Consensus 668 l------------------~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V 728 (819)
+ ..++.+..+..|...|.+++|+|++..+++.+ .|+.|++||+++++.+..+. +...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~v 247 (372)
T 1k8k_C 171 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS---HDSTVCLADADKKMAVATLASETLPL 247 (372)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE---TTTEEEEEEGGGTTEEEEEECSSCCE
T ss_pred cccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe---CCCEEEEEECCCCceeEEEccCCCCe
Confidence 5 46788888989999999999999998665543 79999999999999888885 45689
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCC--CcE--------------------------------E------EEE-ec
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPT--LTQ--------------------------------V------AKL-TG 767 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s--~k~--------------------------------l------~sl-~g 767 (819)
.+++|+|+++.+++ | .|+.|++|++.+ ++. . ..+ .+
T Consensus 248 ~~~~~~~~~~~l~~--~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (372)
T 1k8k_C 248 LAVTFITESSLVAA--G-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL 324 (372)
T ss_dssp EEEEEEETTEEEEE--E-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSS
T ss_pred EEEEEecCCCEEEE--E-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccccc
Confidence 99999999998776 6 899999999987 421 0 223 48
Q ss_pred CCCCEEEEEEe-cCC---CEEEEEeCCCcEEEEECCCCcee
Q psy10114 768 HSYRVLYLAMS-PDG---EAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 768 H~~~VtsLafS-pDG---~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
|...|++++|+ ++| ++|++|+.||.|++||+.+++..
T Consensus 325 h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 325 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp SSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred ccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 99999999966 677 99999999999999999776543
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=301.13 Aligned_cols=278 Identities=19% Similarity=0.305 Sum_probs=234.4
Q ss_pred cceEEEEEecC------CeEEEEECCCeEEEEEcCCCceEEEEe-c--cCCCCCeEEEEEcCC----CCEEEEEecCceE
Q psy10114 513 DFYLNLVDWSS------QNVLSVGLGSCVYLWSACTSQVTRLCD-L--SADGNSVTSVAWNER----GNLVAVGTHHGYV 579 (819)
Q Consensus 513 Dfyv~~ldwS~------~~LLa~g~Dg~V~LWd~~tg~~~~l~~-l--~~h~~~VtsLafSpd----G~~LAsGs~DGtI 579 (819)
.-.+.+++|++ ..+++++.++.|++||..+++...... . ..|.+.|++++|+++ |++|++|+.||.|
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 44577888883 358888888899999998776543322 2 236788999999998 6799999999999
Q ss_pred EEeecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEE---ecccCCeEEEEECCCCCE
Q psy10114 580 QVWDVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRL---VGHRQEVCGLKWSPDNQY 653 (819)
Q Consensus 580 ~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l---~gH~~~VtsLafSpdg~~ 653 (819)
++||+.+++.+..+.+|...|.+++|+ ++.|++|+.||.|++||+++++ ....+ .+|...|.+++|+|++++
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEK 175 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe--EEEEecccccccCceeEEEECCCCCE
Confidence 999999999999999999999999994 5699999999999999998865 33455 689999999999999999
Q ss_pred EEEEECCCeEEEEECCCCceeEEEe----------------------------cCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 654 LASGGNDNRLYVWNLHSMSPLQTYT----------------------------EHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t~~~i~t~~----------------------------~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
+++|+.||.|++||+++++....+. .|...|.+++|+ ++ ++++++ .|
T Consensus 176 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~--~d 250 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKS--CE 250 (366)
T ss_dssp EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEEC--SS
T ss_pred EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEe--cC
Confidence 9999999999999998876544333 389999999999 44 555554 79
Q ss_pred CeEEEEECCCCce--------------eEEE-cCCCCeEEEEEccC--CCEEEEEEecCCCeEEEEECCCCc----EEEE
Q psy10114 706 RCIRFWNTLTGQP--------------MQCV-DTGSQVCNLAWSKH--SSELVSTHGYSQNQILVWKYPTLT----QVAK 764 (819)
Q Consensus 706 gtIrIWDl~tg~~--------------v~~l-~~~s~V~sLafSpd--g~~LastsGssDg~I~IWDl~s~k----~l~s 764 (819)
+.|++||+.+++. +..+ .+...|.+++|+|+ ++.+++ |+.||.|++||+.+++ ....
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~--~~~dg~i~vwd~~~~~~~~~~~~~ 328 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL--GNQVGKLYVWDLEVEDPHKAKCTT 328 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE--ECTTSCEEEEECCSSSGGGCEEEE
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE--EecCCcEEEEECCCCCCccccceE
Confidence 9999999988654 4444 35677999999999 999998 8899999999999875 4557
Q ss_pred EecC--CCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 765 LTGH--SYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 765 l~gH--~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+.+| ...|++++|+|+|++|++|+.||.|++||+.
T Consensus 329 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 329 LTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 8887 7999999999999999999999999999985
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=297.52 Aligned_cols=251 Identities=17% Similarity=0.354 Sum_probs=225.4
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t 626 (819)
..+.+|.+.|++++|+|+|++|++|+.||+|++||..+++.+..+..|...|.+++| +++++++|+.|+.|++||+.+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence 467889999999999999999999999999999999999999999999999999999 577999999999999999987
Q ss_pred CCc--cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 627 PNS--QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 627 ~~~--~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
.+. .....+.+|.+.|.++.|++++. +++++.|++|++||+++++++..+.+|.+.|.+++|+|++..+ ++|+ .
T Consensus 129 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sg~--~ 204 (340)
T 1got_B 129 REGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF-VSGA--C 204 (340)
T ss_dssp CSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEE--T
T ss_pred CCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE-EEEe--C
Confidence 542 33466789999999999998765 8999999999999999999999999999999999999999854 4554 8
Q ss_pred CCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEecCC
Q psy10114 705 DRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSPDG 781 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSpDG 781 (819)
|+.|++||+++++.+..+. +...|.+++|+|+++.+++ |+.|+.|++||+++++.+..+.. +...|.+++|+|+|
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT--GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE--EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 9999999999999888874 6778999999999999998 78999999999999988877753 33579999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCceec
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
++|++|+.||.|++||+.+++...
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEECCCCeEEEEEcccCcEee
Confidence 999999999999999998876543
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-33 Score=299.37 Aligned_cols=274 Identities=16% Similarity=0.217 Sum_probs=230.4
Q ss_pred ceEEEEEecC---CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCceE
Q psy10114 514 FYLNLVDWSS---QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 514 fyv~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
-.+.+++|++ +.+++++.|+.|++||..+++........+|.+.|.+++|+| ++++|++|+.||.|++||+.+ +.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cc
Confidence 4577778875 469999999999999999988877666667999999999999 789999999999999999985 55
Q ss_pred EEEEecC---CCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EEEEEECCCeE
Q psy10114 590 VHKLVGH---TARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YLASGGNDNRL 663 (819)
Q Consensus 590 i~tl~gH---s~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~LaSGS~DGtI 663 (819)
+..+..+ ...|.+++| +++.+++|+.||.|++||++. .....+.+|...|.+++|+|+++ ++++|+.|+.|
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 229 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATV 229 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEE
Confidence 6666544 488999999 577999999999999999953 35678889999999999999999 99999999999
Q ss_pred EEEECCC----CceeEEEecCCCCEEEEEEcC-CCCeEEEEEccCCCCeEEEEECCCCceeEEEc-C-------------
Q psy10114 664 YVWNLHS----MSPLQTYTEHLAAVKAIAWSP-HHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-T------------- 724 (819)
Q Consensus 664 ~IWDl~t----~~~i~t~~~h~~~VtsLafSP-dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~------------- 724 (819)
++||+++ +..+..+ +|...|.+++|+| ++..++++ + .|+.|++||+++++....+. +
T Consensus 230 ~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~-~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (383)
T 3ei3_B 230 KLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTT-D--QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKA 305 (383)
T ss_dssp EEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEE-E--SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCC
T ss_pred EEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEE-c--CCCcEEEEECCCCccccccccccccccccccceEE
Confidence 9999987 5566666 6999999999999 88866554 3 79999999999887655442 1
Q ss_pred ----CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 725 ----GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 725 ----~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
...+..++|+|+++. + |+.|+.|++||+.+++.+..+.+ |.+.+..++|+|+|++|++|+ ||.|++||+
T Consensus 306 ~~~p~~~~~~~~~s~dg~~--s--~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 306 TWHPMYDLIVAGRYPDDQL--L--LNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp EECSSSSEEEEECBCCTTT--C--TTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred eccCCCCceEEEecCCccc--c--cCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEec
Confidence 123444666666666 3 67899999999999999999987 467788889999999999997 999999998
Q ss_pred CC
Q psy10114 799 FS 800 (819)
Q Consensus 799 ~s 800 (819)
.+
T Consensus 381 ~~ 382 (383)
T 3ei3_B 381 ED 382 (383)
T ss_dssp C-
T ss_pred CC
Confidence 75
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=296.86 Aligned_cols=282 Identities=15% Similarity=0.281 Sum_probs=235.0
Q ss_pred cceEEEEEecC--CeEEEEE-C---CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC---CCEEEEEecCceEEEee
Q psy10114 513 DFYLNLVDWSS--QNVLSVG-L---GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER---GNLVAVGTHHGYVQVWD 583 (819)
Q Consensus 513 Dfyv~~ldwS~--~~LLa~g-~---Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd---G~~LAsGs~DGtI~IWD 583 (819)
...+.+++|++ +.+++++ . |+.|++||..+++....... +|.+.|.+++|+|+ |++|++|+.||.|++||
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 34577888886 3566555 3 89999999999887655443 57899999999998 79999999999999999
Q ss_pred cCCce-EEEEEecCCCCeEEEEe--------CCceeeeccCCCeEEEEECCCCCccceEEEecccC----CeEEEE----
Q psy10114 584 VSVAK-QVHKLVGHTARVGALAW--------NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ----EVCGLK---- 646 (819)
Q Consensus 584 l~tgk-~i~tl~gHs~~V~sLaw--------ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~----~VtsLa---- 646 (819)
+.+++ .+..+.+|...|.+++| +++.|++|+.||.|++||+++++. ....+..|.+ .+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-PVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-CSEEECCCTTSCCCCEEEEEEECC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-cceeccccCCCCCCceEEEEEEec
Confidence 99988 88999999999999965 366999999999999999998762 3455555544 788888
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcC---CCCeEEEEEccCCCCeEEEEECCCCceeEEE-
Q psy10114 647 WSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP---HHHGLLASGGGTADRCIRFWNTLTGQPMQCV- 722 (819)
Q Consensus 647 fSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP---dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l- 722 (819)
|+++++++++|+.||.|++||+++++.... ..|...|.+++|+| ++..++++ + .|+.|++||+++++....+
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~-~--~dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVAT-S--LEGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEE-E--STTEEEEEEEEEEETTTEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEE-C--CCCeEEEEeCcCCCccccee
Confidence 788999999999999999999999887544 56889999999999 77766554 3 7999999999887655433
Q ss_pred -----cCCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCC-------------------cEEEEEecCCCCEEEEEE
Q psy10114 723 -----DTGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTL-------------------TQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 723 -----~~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~-------------------k~l~sl~gH~~~VtsLaf 777 (819)
.+...|.+++|+|+++ .+++ |+.||.|++||+.++ +.+..+.+|.+.|++++|
T Consensus 252 ~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 329 (357)
T 3i2n_A 252 SVSEKAHKSTVWQVRHLPQNRELFLT--AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDW 329 (357)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEE--EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEE
T ss_pred eeccCCCcCCEEEEEECCCCCcEEEE--EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEE
Confidence 5778899999999999 5666 778999999998743 467788899999999999
Q ss_pred ecCCCEEE-EEeCCCcEEEEECCCCc
Q psy10114 778 SPDGEAIV-TGAGDETLRFWNVFSKV 802 (819)
Q Consensus 778 SpDG~~La-SGS~DGtIrIWdl~s~~ 802 (819)
+|+|++|+ +|+.||.|++||+.+.+
T Consensus 330 s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 330 SPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99999998 89999999999998754
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=289.23 Aligned_cols=253 Identities=22% Similarity=0.413 Sum_probs=226.2
Q ss_pred EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEEC
Q psy10114 547 RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 547 ~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi 624 (819)
....+.+|.+.|++++|+|+|++|++|+.||.|++||..+++....+.+|...|.+++| +++.|++|+.||.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 34567899999999999999999999999999999999999999999999999999999 5779999999999999999
Q ss_pred CCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
++++ ....+.+|...|.+++|+|+++++++|+.|+.|++||+++++.+..+..|...|.+++|+|+++.+++ ++ .
T Consensus 95 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~--~ 169 (312)
T 4ery_A 95 SSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS-SS--Y 169 (312)
T ss_dssp TTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE-EE--T
T ss_pred CCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE-Ee--C
Confidence 8865 45778899999999999999999999999999999999999999999999999999999999986554 44 7
Q ss_pred CCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEE--EEE-ec
Q psy10114 705 DRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLY--LAM-SP 779 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vts--Laf-Sp 779 (819)
|+.|++||+++++.+..+. ....+..++|+|+++.+++ ++.|+.|++||+.+++.+..+.+|...+.. ..+ .+
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA--ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEE--EETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEE--EcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 9999999999999887763 4567999999999999998 778999999999999999999988765332 234 46
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
++++|++|+.||.|++||+.+++....
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred CCcEEEEECCCCEEEEEECCCchhhhh
Confidence 789999999999999999998876543
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-33 Score=308.07 Aligned_cols=276 Identities=26% Similarity=0.468 Sum_probs=240.6
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
.+.+++++++.+++++.||.|++||..+++... .+.+|.+.|.+++| +++.|++|+.||.|++||+++++.+..+.
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 210 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR--ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI 210 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSSCCEEE--EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC
T ss_pred cEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEE--EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 477889999999999999999999999988654 56789999999999 78899999999999999999999999999
Q ss_pred cCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCcc-ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce
Q psy10114 595 GHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQ-SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP 673 (819)
Q Consensus 595 gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~-~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~ 673 (819)
+|...|.+++|+++.+++|+.||.|++||++++... ....+.+|...|.+++| +++++++|+.||.|++||+++++.
T Consensus 211 ~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 211 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 999999999999999999999999999999886643 22567889999999999 789999999999999999999999
Q ss_pred eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 674 i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
+..+.+|...|.+++++ +. .+++|+ .|+.|++||+++++.+..+. +...|.+++| +++.+++ |+.||.|+
T Consensus 289 ~~~~~~~~~~v~~~~~~--~~-~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s--g~~dg~i~ 359 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYR--DR-LVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS--GAYDGKIK 359 (435)
T ss_dssp EEEEECCSSCEEEEEEE--TT-EEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEE--EETTSCEE
T ss_pred EEEEcCCCCcEEEEEeC--CC-EEEEEe--CCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEE--EeCCCcEE
Confidence 99999999999999995 44 555555 89999999999999988885 6678999998 7888888 78999999
Q ss_pred EEECCCCc---------EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 753 VWKYPTLT---------QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 753 IWDl~s~k---------~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+||+.+++ .+..+.+|.+.|.+++| ++++|++|+.||+|++||+.++......
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE 421 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----------
T ss_pred EEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC
Confidence 99997665 78899999999999999 7889999999999999999887655443
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=308.52 Aligned_cols=272 Identities=18% Similarity=0.206 Sum_probs=210.6
Q ss_pred eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec------CceEEEeecCCceE----EEEEe
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH------HGYVQVWDVSVAKQ----VHKLV 594 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~------DGtI~IWDl~tgk~----i~tl~ 594 (819)
.++.++.+.....|+..... ...|+..|++++|+|||++||+|+. ||.|++|+..++.. .....
T Consensus 18 ~~~~~~g~~~~~~w~~p~~~------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~ 91 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPVTA------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGV 91 (357)
T ss_dssp ----------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEE
T ss_pred eEEecCCCccccccCCCCCC------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccC
Confidence 34555556778889875432 3468999999999999999999997 78899999877653 33455
Q ss_pred cCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccce--EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 595 GHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSE--RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 595 gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v--~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
+|...|.+++|+ .+.+++++.||+|++||+.+++.... ....+|...|.+++|+|++++|++|+.|++|++||++++
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~ 171 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK 171 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 789999999994 44677889999999999988764332 344589999999999999999999999999999999999
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---CCCCeEEEEEccCCC-EEEEEEecC
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---TGSQVCNLAWSKHSS-ELVSTHGYS 747 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---~~s~V~sLafSpdg~-~LastsGss 747 (819)
+.+..+.+|...|.+++|++++..++++++ .|++|++||++++++...+. +...+.+++|+|++. .+++ |+.
T Consensus 172 ~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~--g~~ 247 (357)
T 4g56_B 172 AVLKSYNAHSSEVNCVAACPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC--GDE 247 (357)
T ss_dssp EEEEEECCCSSCEEEEEECTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE--EES
T ss_pred cEEEEEcCCCCCEEEEEEccCCCceeeeec--cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE--eec
Confidence 999999999999999999999987777776 89999999999988776553 456799999999865 4555 788
Q ss_pred CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC-CEEEEEeCCCcEEEEECCCCceecc
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG-~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
|+.|++||+++++.+..+.+|...|++++|+|++ ++|++|+.||+|++||+.+++....
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 9999999999999999999999999999999987 5799999999999999998876543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-33 Score=292.39 Aligned_cols=247 Identities=18% Similarity=0.315 Sum_probs=211.5
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC--ceEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEE
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV--AKQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRD 623 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t--gk~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWD 623 (819)
.+.+|.+.|++++|+++|++||+|+.||+|+|||++. .+.+.++.+|.+.|.+++|+ ++.|++|+.||+|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4678999999999999999999999999999999974 46788999999999999994 67999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCCc--eeEEEecCCCCEEEEEEcCCC------
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHH------ 693 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg------ 693 (819)
+++++......+.+|...|.+++|+|+ +++|++|+.|++|++||++++. ....+.+|...|.+++|+|++
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 998764456678889999999999997 8899999999999999998763 246678899999999999974
Q ss_pred ------CeEEEEEccCCCCeEEEEECCCCc----eeEEE-cCCCCeEEEEEccCC---CEEEEEEecCCCeEEEEECCCC
Q psy10114 694 ------HGLLASGGGTADRCIRFWNTLTGQ----PMQCV-DTGSQVCNLAWSKHS---SELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 694 ------~~LLaSGgGs~DgtIrIWDl~tg~----~v~~l-~~~s~V~sLafSpdg---~~LastsGssDg~I~IWDl~s~ 759 (819)
..++++|+ .|++|++||+++++ ....+ .|...|.+++|+|++ +.+++ ++.|+.|++||+.+.
T Consensus 164 ~~~~~~~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las--~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 164 HNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS--VSQDRTCIIWTQDNE 239 (297)
T ss_dssp ------CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTSCEEEEEESST
T ss_pred CCCCCCcceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE--EECCCcEEEEEeCCC
Confidence 23566665 89999999998876 34444 467889999999995 67777 789999999998764
Q ss_pred c---EEEEE--ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 760 T---QVAKL--TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 760 k---~l~sl--~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
. ....+ .+|...|.+++|+|+|++|++++.||+|++|+...
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 3 12233 46788999999999999999999999999999763
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-32 Score=308.37 Aligned_cols=272 Identities=29% Similarity=0.494 Sum_probs=237.9
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
..+..+.|+ ++.+++++.|+.|++||... +.. ..+.+|.+.|.+++|+|+++.+++++.||.|++||.. ++.+.
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~~--~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~ 338 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QLL--QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQ 338 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cEE--EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeE
Confidence 346667776 45799999999999999754 333 3567899999999999999999999999999999975 45677
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+.+|...|.+++| +++.+++|+.||.|++||... .....+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~- 414 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR- 414 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-
Confidence 88999999999999 577999999999999999643 345778899999999999999999999999999999995
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssD 748 (819)
+++.+..+.+|...|.+++|+|+++.+++.+ .|+.|++||.. ++.+..+ .+...|.+++|+|+++.+++ ++.|
T Consensus 415 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~---~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las--~~~d 488 (577)
T 2ymu_A 415 NGQLLQTLTGHSSSVWGVAFSPDDQTIASAS---DDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIAS--ASDD 488 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEE--EETT
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEc---CCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEE--EeCC
Confidence 6778889999999999999999998665543 79999999975 4555544 57888999999999999998 7789
Q ss_pred CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 749 NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
+.|++||. +++.+..+.+|...|++++|+|||++|++++.||.|++||...
T Consensus 489 ~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 489 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 99999994 7889999999999999999999999999999999999999743
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-32 Score=300.82 Aligned_cols=278 Identities=19% Similarity=0.303 Sum_probs=245.7
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
.+.++.++++.+++++.||.|++||..+++... .+.+|.+.|.+++|++++ .+++|+.||+|++||+++++.+..+.
T Consensus 124 v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~ 200 (464)
T 3v7d_B 124 VITCLQFEDNYVITGADDKMIRVYDSINKKFLL--QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFE 200 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cEEEEEECCCEEEEEcCCCcEEEEECCCCcEEE--EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEEC
Confidence 356788899999999999999999999987644 677899999999999988 99999999999999999999999999
Q ss_pred cCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCcc---------------------ceEEEecccCCeEEEEECC
Q psy10114 595 GHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQ---------------------SERRLVGHRQEVCGLKWSP 649 (819)
Q Consensus 595 gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~---------------------~v~~l~gH~~~VtsLafSp 649 (819)
+|.+.|.+++|. ++.+++|+.||.|++||+++.... ....+.+|...|.++ ++
T Consensus 201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (464)
T 3v7d_B 201 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 278 (464)
T ss_dssp CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence 999999999993 478999999999999999876532 145677888888887 56
Q ss_pred CCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCe
Q psy10114 650 DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQV 728 (819)
Q Consensus 650 dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V 728 (819)
+++++++|+.||.|++||+++++++..+.+|...|.+++|+|+++.+++ |+ .|+.|++||+++++.+..+. +...|
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-g~--~dg~i~vwd~~~~~~~~~~~~h~~~v 355 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS-AS--MDTTIRIWDLENGELMYTLQGHTALV 355 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEE-EE--TTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEE-Ee--CCCcEEEEECCCCcEEEEEeCCCCcE
Confidence 7899999999999999999999999999999999999999999986655 43 79999999999999998884 67789
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.+++|+ ++.+++ |+.||.|++||+.+++...... +...+..++|+++++++++|+ ||.|++||+.+++...+
T Consensus 356 ~~~~~~--~~~l~s--~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 356 GLLRLS--DKFLVS--AAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEEC--SSEEEE--EETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred EEEEEc--CCEEEE--EeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 999997 578888 7899999999999988776664 667788899999999999998 89999999999887654
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=287.80 Aligned_cols=277 Identities=21% Similarity=0.258 Sum_probs=238.0
Q ss_pred EecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce---EEEEEe--
Q psy10114 520 DWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK---QVHKLV-- 594 (819)
Q Consensus 520 dwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk---~i~tl~-- 594 (819)
+.+++.++++..++.+..|+.... .......+|.+.|++++|+|+++++++++ ||.|++||+.+++ .+..+.
T Consensus 18 s~dg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~ 94 (337)
T 1gxr_A 18 TADGQMQPVPFPPDALIGPGIPRH--ARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCL 94 (337)
T ss_dssp CSSSCEEECCCCTTSSSSTTCCSE--EEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECS
T ss_pred CCCCCEEEeecCCCcEeccccCCc--cccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeeccccc
Confidence 334556766666676666654332 22233446899999999999999999999 9999999998764 334444
Q ss_pred cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc
Q psy10114 595 GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 595 gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~ 672 (819)
+|...|.+++| +++.+++|+.||.|++||+++++......+..|...|.+++|+|+++++++++.||.|++||+++++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 79999999999 4778999999999999999987755667788899999999999999999999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
.+..+..|...|.+++|+|+++.+++++ .|+.|++||+++++.+..+.+...+.+++|+|+++.+++ ++.++.|+
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~~~~i~ 249 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGG---LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV--GMESSNVE 249 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEE
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEe---cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEE--EcCCCcEE
Confidence 9999999999999999999998666544 799999999999999999999999999999999999998 77899999
Q ss_pred EEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 753 IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+||+.+++. ..+.+|...|.+++|+|+|++|++++.||.|++||+.+++...
T Consensus 250 ~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 250 VLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp EEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 999998775 4678899999999999999999999999999999999887653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=300.55 Aligned_cols=273 Identities=13% Similarity=0.148 Sum_probs=229.2
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA 598 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~ 598 (819)
+..+++.+++++.|+.|++||..+++... .+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|..
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~ 182 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQRE--IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEE--ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceee--ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence 34456789999999999999999876543 5678999999999999999999999999999999999999999999999
Q ss_pred CeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEec---cc---------------------CCeEEEEECCCCC
Q psy10114 599 RVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVG---HR---------------------QEVCGLKWSPDNQ 652 (819)
Q Consensus 599 ~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g---H~---------------------~~VtsLafSpdg~ 652 (819)
.|.+++| +++.|++|+.||.|++||+++++. ...+.. |. ..+.+++|+|+++
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 9999999 577999999999999999998653 344443 33 3444455688999
Q ss_pred EEEEEECCCeEEEEECCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-eEEEc--CCCCe
Q psy10114 653 YLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-MQCVD--TGSQV 728 (819)
Q Consensus 653 ~LaSGS~DGtI~IWDl~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-v~~l~--~~s~V 728 (819)
++++|+.||.|++||+++++.+..+. .|...|.+++|+|++..++++|+ .||.|++||+++++. +..+. +...+
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v 338 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY--ENGMLAQWDLRSPECPVGEFLINEGTPI 338 (420)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEEESTTSCE
T ss_pred EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe--CCCeEEEEEcCCCcCchhhhhccCCCCc
Confidence 99999999999999999998877765 47899999999999995666665 899999999998754 55553 56778
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCC---------cEEEEEecCCCCEEEEEEecCCC---EEEEEeCCCcEEEE
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTL---------TQVAKLTGHSYRVLYLAMSPDGE---AIVTGAGDETLRFW 796 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~---------k~l~sl~gH~~~VtsLafSpDG~---~LaSGS~DGtIrIW 796 (819)
.++.+ ++++.+++ ++.|+.|++||+.+. .....+.+|.+.|.+++|+|+++ .+++++.+|.+.+|
T Consensus 339 ~~~~~-~~~~~l~s--~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~ 415 (420)
T 3vl1_A 339 NNVYF-AAGALFVS--SGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY 415 (420)
T ss_dssp EEEEE-ETTEEEEE--ETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred eEEEe-CCCCEEEE--ecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence 88855 57788887 889999999998763 22334667899999999999999 78888889999999
Q ss_pred ECCC
Q psy10114 797 NVFS 800 (819)
Q Consensus 797 dl~s 800 (819)
++++
T Consensus 416 ~~~~ 419 (420)
T 3vl1_A 416 NLSN 419 (420)
T ss_dssp ESCC
T ss_pred eccC
Confidence 9875
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=292.08 Aligned_cols=252 Identities=19% Similarity=0.342 Sum_probs=225.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++| ++..+++|+.|+.+++|++...
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFD 138 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecc
Confidence 56789999999999999999999999999999999999999999999999999999 5789999999999999998754
Q ss_pred C----ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCC-CeEEEEEcc
Q psy10114 628 N----SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHH-HGLLASGGG 702 (819)
Q Consensus 628 ~----~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg-~~LLaSGgG 702 (819)
. ......+.+|...|.+++|+++++.+++|+.|++|++||+++++.+..+.+|...|.+++|+|+. ..++++|+
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs- 217 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG- 217 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE-
T ss_pred ccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe-
Confidence 2 23456778899999999999999999999999999999999999999999999999999998853 23566665
Q ss_pred CCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC--CCCEEEEEEec
Q psy10114 703 TADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH--SYRVLYLAMSP 779 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH--~~~VtsLafSp 779 (819)
.|++|++||+++++++..+. +...|.+++|+|+++.+++ |+.|+.|++||+++++.+..+..+ ...+.+++|+|
T Consensus 218 -~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 218 -CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFAS--GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp -TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred -CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEE--EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 89999999999999988874 6788999999999999998 789999999999998888777644 35789999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+|++|++|+.|++|++||+.+++...
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCCEEEEEECCCcEEEEECCCCceEE
Confidence 99999999999999999998876543
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=309.82 Aligned_cols=285 Identities=16% Similarity=0.207 Sum_probs=227.8
Q ss_pred cceEEEEEecC---CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCce
Q psy10114 513 DFYLNLVDWSS---QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAK 588 (819)
Q Consensus 513 Dfyv~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk 588 (819)
+-.+.+++|++ +.+++|+.||.|+|||+.+++......+.+|.+.|++++|+| ++++|++|+.||+|++||++++.
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 198 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc
Confidence 34588999985 358899999999999999887766677888999999999998 68999999999999999998765
Q ss_pred EEEEEec--CCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-EEEEEECCCeE
Q psy10114 589 QVHKLVG--HTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-YLASGGNDNRL 663 (819)
Q Consensus 589 ~i~tl~g--Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-~LaSGS~DGtI 663 (819)
....... +...+.+++| ++.+|++|+.||.|++||++.. .+..+.+|...|.+++|+|+++ ++++|+.|+.|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEeeeecCCCceEEEEecCccee
Confidence 4444433 3445778888 5779999999999999999763 3466789999999999999876 78899999999
Q ss_pred EEEECCCCceeEE---EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CC------CCeEEEEE
Q psy10114 664 YVWNLHSMSPLQT---YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TG------SQVCNLAW 733 (819)
Q Consensus 664 ~IWDl~t~~~i~t---~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~------s~V~sLaf 733 (819)
++||+++.+.... ..+|...|.+++|+|+|..+++++ .|+.|++||+.+++....+. +. ..+....|
T Consensus 276 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~---~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 276 KIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD---QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp CEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE---SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred eEEecccccccceEEEeeeccccccceeECCCCCeeEEEc---CCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence 9999988765433 357899999999999999666543 79999999999988766652 11 12345677
Q ss_pred ccCCCEEEEEE----------ecCCCeEEEEECCCCcEEEEEe-cCCCCEEEE-EEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 734 SKHSSELVSTH----------GYSQNQILVWKYPTLTQVAKLT-GHSYRVLYL-AMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 734 Spdg~~Lasts----------GssDg~I~IWDl~s~k~l~sl~-gH~~~VtsL-afSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
++++..+++.. +..++.|++||..+++.+..+. +|...|.++ +|+|+|++|++|+ |++|++||+.++
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 77777776631 2234679999999999998875 678888887 6999999999876 889999999987
Q ss_pred cee
Q psy10114 802 VRS 804 (819)
Q Consensus 802 ~~~ 804 (819)
+..
T Consensus 432 k~r 434 (435)
T 4e54_B 432 RTR 434 (435)
T ss_dssp ---
T ss_pred eee
Confidence 643
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-33 Score=301.93 Aligned_cols=274 Identities=15% Similarity=0.218 Sum_probs=230.6
Q ss_pred EEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCC
Q psy10114 518 LVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT 597 (819)
Q Consensus 518 ~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs 597 (819)
.++.+++.+++++.|+.|++||..+++... .+..+ ..+....|+++|++|++|+.||.|++||+++++....+.+|.
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSK--MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTT--TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceee--EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc
Confidence 345567889999999999999998765422 23333 445556789999999999999999999999999988888999
Q ss_pred CCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 598 ARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 598 ~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
..|.+++| +++.|++|+.||.|++||+++++ ....+.+|...|.+++|+|++++|++|+.||.|++||+++++.+.
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 99999999 56799999999999999999866 347788999999999999999999999999999999999999998
Q ss_pred EEec---CCCCEEEEEE---------------------cCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--CCCCeE
Q psy10114 676 TYTE---HLAAVKAIAW---------------------SPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVC 729 (819)
Q Consensus 676 t~~~---h~~~VtsLaf---------------------SPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~~s~V~ 729 (819)
.+.. +...|.+++| +|+++.++ +|+ .||.|++||+++++....+. +...+.
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGH--VSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEE--TTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEc--CCCeEEEEECCCCceeEEcccccCCCce
Confidence 8874 4455555554 67777554 444 79999999999998887774 467899
Q ss_pred EEEEccCCC-EEEEEEecCCCeEEEEECCCCcE-EEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 730 NLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQ-VAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 730 sLafSpdg~-~LastsGssDg~I~IWDl~s~k~-l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+++|+|+++ .+++ |+.||.|++||+++++. +..+.+ |...|.++.+ +++++|++++.||.|++|++....
T Consensus 295 ~~~~~~~~~~~l~~--g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 295 SLTVDGNNANYIYA--GYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp EEEECSSCTTEEEE--EETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTT
T ss_pred eEEEeCCCCCEEEE--EeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCC
Confidence 999999999 7777 78999999999998754 677776 6677887755 578899999999999999998743
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=293.65 Aligned_cols=253 Identities=22% Similarity=0.392 Sum_probs=215.8
Q ss_pred eEEEEeccCCCC-CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE---EecCCCCeEEEEe--CCceeeeccCCCe
Q psy10114 545 VTRLCDLSADGN-SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK---LVGHTARVGALAW--NGDMLSSGSRDRM 618 (819)
Q Consensus 545 ~~~l~~l~~h~~-~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t---l~gHs~~V~sLaw--ng~~LaSGS~DGt 618 (819)
...+..+.+|.+ .|.+++|+|+|++||+|+.||+|+|||+++++.... ..+|...|.+++| ++++|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 344556778877 999999999999999999999999999988764422 2589999999999 5779999999999
Q ss_pred EEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc---eeEEEecCCCCEEEEEEcCCCCe
Q psy10114 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS---PLQTYTEHLAAVKAIAWSPHHHG 695 (819)
Q Consensus 619 I~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~---~i~t~~~h~~~VtsLafSPdg~~ 695 (819)
|++||+..+.......+.+|...|.+++|+|++++|++|+.|++|++||++++. .+..+.+|...|.+++|+|+++.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 999999887655667889999999999999999999999999999999998764 45677889999999999999986
Q ss_pred EEEEEccCCCCeEEEEECCCCcee--EEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC--------------
Q psy10114 696 LLASGGGTADRCIRFWNTLTGQPM--QCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-------------- 758 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~tg~~v--~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-------------- 758 (819)
+++ ++ .|++|++||.++++.. ..+ .+...|.+++|+|+|+.+++ |+.|+.|++||...
T Consensus 165 l~s-~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s--~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 165 LAS-AS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLAS--CSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp EEE-EE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred EEE-Ee--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEE--EeCCCeEEEeccccCCCCccceeeccCC
Confidence 554 44 7999999999887543 344 46788999999999999998 78999999999632
Q ss_pred -CcEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 759 -LTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 759 -~k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.+.+..+.+ |...|.+++|++++..|++++.|+.|++|+...+.
T Consensus 240 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 240 SWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred ccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 133445555 88899999999999999999999999999987654
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=296.65 Aligned_cols=272 Identities=22% Similarity=0.352 Sum_probs=245.0
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
...+.++.++++.+++++.|+.|++||..+++.. ..+.+|...|.+++|+ ++.+++|+.||.|++||+.+++.+..
T Consensus 159 ~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~ 234 (445)
T 2ovr_B 159 TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECI--HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHV 234 (445)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEE
T ss_pred CCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEE--EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 3457888999999999999999999999998764 4677899999999996 67899999999999999999999999
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~ 672 (819)
+.+|...|.+++|+++.+++|+.||.|++||+++++ ....+.+|...|.+++| +++.+++|+.||.|++||+++++
T Consensus 235 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 235 LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp EECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC
T ss_pred EcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCc--EeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC
Confidence 999999999999999999999999999999998865 45778899999999999 78999999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc----CCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD----TGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~----~~s~V~sLafSpdg~~LastsGssD 748 (819)
.+..+.+|...+.++++++ . .+++|+ .||.|++||+++++.+..+. +...|.+++|+ ++.+++ |+.|
T Consensus 311 ~~~~~~~~~~~v~~~~~~~--~-~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s--~~~d 381 (445)
T 2ovr_B 311 CIHTLTGHQSLTSGMELKD--N-ILVSGN--ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVIT--SSDD 381 (445)
T ss_dssp EEEEECCCCSCEEEEEEET--T-EEEEEE--TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEE--EETT
T ss_pred EEEEEcCCcccEEEEEEeC--C-EEEEEe--CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEE--EeCC
Confidence 9999999999999998854 4 455554 89999999999999988885 56789999995 678887 7899
Q ss_pred CeEEEEECCCCcEEEEE-----ecCCCCEEEEEEecCCCEEEEEeCCCc----EEEEECCCC
Q psy10114 749 NQILVWKYPTLTQVAKL-----TGHSYRVLYLAMSPDGEAIVTGAGDET----LRFWNVFSK 801 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl-----~gH~~~VtsLafSpDG~~LaSGS~DGt----IrIWdl~s~ 801 (819)
|.|++||+.+++.+..+ .+|.+.|.+++|+|+|.++++|+.||+ |.+||+...
T Consensus 382 g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 382 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99999999999999888 478889999999999999999999998 999999764
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-31 Score=294.09 Aligned_cols=275 Identities=24% Similarity=0.412 Sum_probs=245.0
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
+..+.+++++++.+++++.||.|++||..+++... .+.+|.+.|.+++|+ ++.+++|+.||.|++||+++++.+..
T Consensus 119 ~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~ 194 (445)
T 2ovr_B 119 DHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLR--TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT 194 (445)
T ss_dssp TSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE--ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEE--EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 33456789999999999999999999999987654 677899999999998 67999999999999999999999999
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~ 672 (819)
+.+|...|.+++|+++.+++|+.||.|++||+++++ ....+.+|...|.+++| +++.+++|+.||.|++||+++++
T Consensus 195 ~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 195 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 270 (445)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCC--EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE
T ss_pred ECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCc--EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc
Confidence 999999999999999999999999999999999866 45778899999999999 78899999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I 751 (819)
++..+.+|...|.+++| ++..+ ++|+ .|+.|++||+++++.+..+. +...+.++.+ +++.+++ |+.||.|
T Consensus 271 ~~~~~~~~~~~v~~~~~--~~~~l-~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~dg~i 341 (445)
T 2ovr_B 271 CLHTLQGHTNRVYSLQF--DGIHV-VSGS--LDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVS--GNADSTV 341 (445)
T ss_dssp EEEEECCCSSCEEEEEE--CSSEE-EEEE--TTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEE--EETTSCE
T ss_pred EeEEecCCCCceEEEEE--CCCEE-EEEe--CCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEE--EeCCCeE
Confidence 99999999999999999 56654 4444 79999999999999988874 4566777776 5678887 7899999
Q ss_pred EEEECCCCcEEEEEec---CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 752 LVWKYPTLTQVAKLTG---HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~g---H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
++||+.+++.+..+.+ |...|.+++|+ +++|++|+.||.|++||+.+++....
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~ 397 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRN 397 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeee
Confidence 9999999999999986 88899999995 67999999999999999998876544
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-32 Score=291.28 Aligned_cols=277 Identities=15% Similarity=0.312 Sum_probs=235.5
Q ss_pred EEEEEec--CC-eEEEEECCCeEEEEEc----CCCc------eEEEEe--cc------CCCCCeEEEEEcCCCCEEEEEe
Q psy10114 516 LNLVDWS--SQ-NVLSVGLGSCVYLWSA----CTSQ------VTRLCD--LS------ADGNSVTSVAWNERGNLVAVGT 574 (819)
Q Consensus 516 v~~ldwS--~~-~LLa~g~Dg~V~LWd~----~tg~------~~~l~~--l~------~h~~~VtsLafSpdG~~LAsGs 574 (819)
+.+++|+ ++ .+++++.|+.|++|+. .+++ ...... +. +|.+.|++++|+|+|++|++|+
T Consensus 48 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp CSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 3445555 55 8999999999999999 8776 222211 11 1577999999999999999999
Q ss_pred cCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCC-----------
Q psy10114 575 HHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE----------- 641 (819)
Q Consensus 575 ~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~----------- 641 (819)
.||.|++|| .+++.+..+.+|...|.+++| +++.|++++.||.|++||+++++ ....+..+...
T Consensus 128 ~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 128 ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT--VMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE--EEEEECCC--------------
T ss_pred CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc--EEEEeeccccCccceeeccccC
Confidence 999999999 778889999999999999999 57799999999999999998765 34556666655
Q ss_pred ----eEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 642 ----VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 642 ----VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
+.+++|++++ .+++++.||.|++||+++++.+..+..|...|.+++|+|+++.+++++ .|+.|++||+++++
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS---DDGTLRIWHGGNGN 280 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE---TTSCEEEECSSSBS
T ss_pred CcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc---CCCEEEEEECCCCc
Confidence 8999999875 588999999999999999999999999999999999999998655543 79999999999998
Q ss_pred eeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 718 PMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 718 ~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
.+..+. +...+.+++|+|++ .+++ ++.|+.|++||+.+++.+..+..|...|.+++|+|+|++|++++.||.|++|
T Consensus 281 ~~~~~~~~~~~i~~~~~~~~~-~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 281 SQNCFYGHSQSIVSASWVGDD-KVIS--CSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp CSEEECCCSSCEEEEEEETTT-EEEE--EETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceEecCCCccEEEEEECCCC-EEEE--EeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 888875 67889999999999 7776 7789999999999999999999999999999999999999999999999999
Q ss_pred ECCCCc
Q psy10114 797 NVFSKV 802 (819)
Q Consensus 797 dl~s~~ 802 (819)
|+.+++
T Consensus 358 ~~~~~~ 363 (425)
T 1r5m_A 358 DLKKLN 363 (425)
T ss_dssp ECHHHH
T ss_pred ECCCCc
Confidence 998765
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-33 Score=302.85 Aligned_cols=253 Identities=17% Similarity=0.335 Sum_probs=222.9
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t 626 (819)
..+.+|.+.|++++|+|+|++|++|+.||+|+|||..+++....+.+|...|.+++| +++.+++|+.|+.+++||+.+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS 139 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence 467899999999999999999999999999999999999999999999999999999 578999999999999999975
Q ss_pred CC-----ccceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCceeEEE-----ecCCCCEEEEEEcCCCCe
Q psy10114 627 PN-----SQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHSMSPLQTY-----TEHLAAVKAIAWSPHHHG 695 (819)
Q Consensus 627 ~~-----~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t~~~i~t~-----~~h~~~VtsLafSPdg~~ 695 (819)
.. ......+.+|.+.|.++.|+|+ +..|++|+.|++|++||+++++.+..+ .+|...|.+++|++.+..
T Consensus 140 ~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 140 QADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp CSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred CccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC
Confidence 32 2234567899999999999996 457999999999999999999988887 578999999999885555
Q ss_pred EEEEEccCCCCeEEEEECC-CCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC---
Q psy10114 696 LLASGGGTADRCIRFWNTL-TGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY--- 770 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~-tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~--- 770 (819)
++++|+ .|++|++||++ .++.+..+ .+...|.+++|+|+++.+++ |+.|+.|++||+++++.+..+..+..
T Consensus 220 ~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 220 MFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT--GSDDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp EEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE--ECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred EEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE--EcCCCeEEEEECCCCcEEEEecccccccc
Confidence 777766 89999999998 45666666 46788999999999999998 88999999999999999988875432
Q ss_pred ----CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 771 ----RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 771 ----~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
.|++++|+|+|++|++|+.||.|++||+..++...
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVL 334 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEE
Confidence 48999999999999999999999999998776543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=304.98 Aligned_cols=282 Identities=19% Similarity=0.334 Sum_probs=234.8
Q ss_pred cceEEEEEecC--CeEEEEECCCeEEEEEcCCC--ceEEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCc
Q psy10114 513 DFYLNLVDWSS--QNVLSVGLGSCVYLWSACTS--QVTRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 513 Dfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg--~~~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tg 587 (819)
...+.+++|++ +.+++++.|+.|++||..+. ....+..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 34577788874 57999999999999999872 11234567889999999999998 899999999999999999987
Q ss_pred e------EEEE---EecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecc------cCCeEEEEECC
Q psy10114 588 K------QVHK---LVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGH------RQEVCGLKWSP 649 (819)
Q Consensus 588 k------~i~t---l~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH------~~~VtsLafSp 649 (819)
+ .... ..+|...|.+++|+ +..+++|+.||.|++||+++++. ...+..+ ...|.+++|+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEECS
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEECC
Confidence 6 3333 36799999999994 56899999999999999998653 4555555 78899999999
Q ss_pred CC-CEEEEEECCC---eEEEEECCCC-ceeEEEe-cCCCCEEEEEEcC-CCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 650 DN-QYLASGGNDN---RLYVWNLHSM-SPLQTYT-EHLAAVKAIAWSP-HHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 650 dg-~~LaSGS~DG---tI~IWDl~t~-~~i~t~~-~h~~~VtsLafSP-dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
++ .++++++.|+ .|++||++++ +++..+. +|...|.+++|+| ++..+ ++++ .|+.|++||+++++.+..+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~s~~--~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLL-LSSG--RDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCE-EEEE--SSSEEEEECSSSCCEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeE-EEEe--CCCCEEEeeCCCCccceee
Confidence 97 6899999999 9999999986 6777888 8999999999999 66654 4544 7999999999999998887
Q ss_pred c-CCCCeEEEEEccCC-CEEEEEEecCCCeEEEEECCCCcEEEEEe----------------------------------
Q psy10114 723 D-TGSQVCNLAWSKHS-SELVSTHGYSQNQILVWKYPTLTQVAKLT---------------------------------- 766 (819)
Q Consensus 723 ~-~~s~V~sLafSpdg-~~LastsGssDg~I~IWDl~s~k~l~sl~---------------------------------- 766 (819)
. +...|.+++|+|++ ..+++ ++.|+.|++||+.+.+......
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFAC--ASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEE--CCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred cCCCCceEEEEECCCCCCEEEE--EecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 4 57789999999999 77777 8899999999998665322111
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 767 -GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 767 -gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.|...+.+++|+|||++|++|+.||.|++|++.++
T Consensus 380 ~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp STTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 15677889999999999999999999999999865
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=300.19 Aligned_cols=276 Identities=11% Similarity=0.160 Sum_probs=226.9
Q ss_pred ceEEEEEecC---CeEEEEECCCeEEEEEcCC---CceE-EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC-
Q psy10114 514 FYLNLVDWSS---QNVLSVGLGSCVYLWSACT---SQVT-RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS- 585 (819)
Q Consensus 514 fyv~~ldwS~---~~LLa~g~Dg~V~LWd~~t---g~~~-~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~- 585 (819)
-.+.+++|++ +.+++++.|+.|++||..+ +... ....+ +|.+.|++++|+|++++|++|+.||.|++||++
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 4577777765 5799999999999999876 4311 11222 478999999999999999999999999999995
Q ss_pred --CceEEEEEec------------CCCCeEEEEe----CCceeeeccCCCeEEEEECCCCCccceEEEec--ccCCeEEE
Q psy10114 586 --VAKQVHKLVG------------HTARVGALAW----NGDMLSSGSRDRMILQRDVRTPNSQSERRLVG--HRQEVCGL 645 (819)
Q Consensus 586 --tgk~i~tl~g------------Hs~~V~sLaw----ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g--H~~~VtsL 645 (819)
+++......+ +...+.++.+ +++.+++|+.||.|++||+++++ ....+.+ |.+.|.++
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~ 220 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSPRHGAVSSI 220 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCGGGCCEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCCCCCceEEE
Confidence 5544443332 4566777774 47799999999999999999866 3466666 89999999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCceeEEEe-cCCCCEEEEEEcCC---CCeEEEEEccCCCCeEEEEECCCCceeEE
Q psy10114 646 KWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPH---HHGLLASGGGTADRCIRFWNTLTGQPMQC 721 (819)
Q Consensus 646 afSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~-~h~~~VtsLafSPd---g~~LLaSGgGs~DgtIrIWDl~tg~~v~~ 721 (819)
+|+|++++|++|+.||.|++||+++++++..+. .|...|.+++|+|. ...++++|+ .|+.|++||+++++.+..
T Consensus 221 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 221 CIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS--SKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES--TTEEEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc--CCCcEEEEEcCCCcEEEE
Confidence 999999999999999999999999999999886 78889999977764 223566655 899999999999998877
Q ss_pred Ec---------------------------CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec-------
Q psy10114 722 VD---------------------------TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG------- 767 (819)
Q Consensus 722 l~---------------------------~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g------- 767 (819)
+. +...|.+++|+ +++.+++ |+.|+.|++||+.+++....+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 375 (437)
T 3gre_A 299 FINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT--DEATSSIVMFSLNELSSSKAVISPSRFSDV 375 (437)
T ss_dssp EESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE--EGGGTEEEEEETTCGGGCEEEECC--CCCE
T ss_pred EEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe--cCCCCeEEEEECCCcccceEEecccccCce
Confidence 64 33448889999 7777887 88999999999999887777765
Q ss_pred ------------------------------CCCCEEEEEEecC--CCEEEEEeCCCcEEEEE
Q psy10114 768 ------------------------------HSYRVLYLAMSPD--GEAIVTGAGDETLRFWN 797 (819)
Q Consensus 768 ------------------------------H~~~VtsLafSpD--G~~LaSGS~DGtIrIWd 797 (819)
|...|++++|+++ +.+|++|+.||.|++|+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 376 FIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 78999999999999995
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-31 Score=283.34 Aligned_cols=249 Identities=21% Similarity=0.303 Sum_probs=218.3
Q ss_pred EEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCC-----ceEEEEEecCCCCeEEEEe--CCceeeeccCCC
Q psy10114 546 TRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSV-----AKQVHKLVGHTARVGALAW--NGDMLSSGSRDR 617 (819)
Q Consensus 546 ~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~t-----gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DG 617 (819)
.....+.+|.+.|++++|+|++ ++|++|+.||+|++||+.. +..+..+.+|...|.+++| ++.+|++|+.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 3345688999999999999965 8999999999999999864 3567889999999999999 577999999999
Q ss_pred eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCC---
Q psy10114 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH--- 694 (819)
Q Consensus 618 tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~--- 694 (819)
+|++||+++++ ....+.+|...|.+++|+|+++++++|+.|++|++||++ ++.+..+.+|...|.+++|+|.+.
T Consensus 88 ~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 88 TLRLWDVATGE--TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEEEEETTTTE--EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred EEEEEECCCCC--eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 99999998865 457889999999999999999999999999999999996 567788889999999999999643
Q ss_pred --eEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC
Q psy10114 695 --GLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 695 --~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~ 771 (819)
..+++++ .|+.|++||+++++....+ .+...|.+++|+|+++.+++ |+.|+.|++||+.+++.+..+..+ ..
T Consensus 165 ~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~-~~ 239 (319)
T 3frx_A 165 DSVTIISAG--NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS--AGKDGEIMLWNLAAKKAMYTLSAQ-DE 239 (319)
T ss_dssp -CCEEEEEE--TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEE--EETTCEEEEEETTTTEEEEEEECC-SC
T ss_pred CccEEEEEe--CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEE--EeCCCeEEEEECCCCcEEEEecCC-Cc
Confidence 2566665 8999999999998887766 57788999999999999999 789999999999999999888855 67
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 772 VLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
|.+++|+|+|.++++++.+ .+++|++..+..
T Consensus 240 v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~ 270 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATAT-GIKVFSLDPQYL 270 (319)
T ss_dssp EEEEEECSSSSEEEEEETT-EEEEEEETTEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-CcEEEEeCcCee
Confidence 9999999999999988765 599999987654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=279.55 Aligned_cols=249 Identities=18% Similarity=0.318 Sum_probs=215.1
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----eEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEE
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----KQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQR 622 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----k~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IW 622 (819)
+.+|.+.|++++|+|+|++|++|+.||.|++||+.++ +....+.+|...|.+++|+ +++|++|+.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 4689999999999999999999999999999999876 5778888999999999994 6799999999999999
Q ss_pred ECCCCCc-------cceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCCceeEEEe-------------cC
Q psy10114 623 DVRTPNS-------QSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSMSPLQTYT-------------EH 680 (819)
Q Consensus 623 Di~t~~~-------~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~~~i~t~~-------------~h 680 (819)
|++.++. .....+.+|...|.+++|+|+ ++++++++.||.|++||+++++.+..+. .|
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 9988643 335677889999999999999 9999999999999999999887654433 57
Q ss_pred CCCEEEEEEcCC---CCeEEEEEccCCCCeEEEEECCCCce--eEEE-cCCCCeEEEEEccCC----CEEEEEEecCCCe
Q psy10114 681 LAAVKAIAWSPH---HHGLLASGGGTADRCIRFWNTLTGQP--MQCV-DTGSQVCNLAWSKHS----SELVSTHGYSQNQ 750 (819)
Q Consensus 681 ~~~VtsLafSPd---g~~LLaSGgGs~DgtIrIWDl~tg~~--v~~l-~~~s~V~sLafSpdg----~~LastsGssDg~ 750 (819)
...+.+++|+|+ +.. +++++ .|+.+.+|+...++. +..+ .+...|.+++|+|++ +.+++ |+.||.
T Consensus 167 ~~~~~~~~~~p~~~~~~~-l~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s--~~~dg~ 241 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEK-LAVSA--LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT--GCKDGR 241 (351)
T ss_dssp SCCCEEEEECCCSSSCCE-EEEEE--TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE--EETTSC
T ss_pred ccceeEEEeccCCCCCcE-EEEec--CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEE--EcCCCe
Confidence 889999999997 664 44544 799998888887765 3344 367789999999998 67777 789999
Q ss_pred EEEEECCCC----------------------------------------------cEEEEEecCCCCEEEEEEecCCCEE
Q psy10114 751 ILVWKYPTL----------------------------------------------TQVAKLTGHSYRVLYLAMSPDGEAI 784 (819)
Q Consensus 751 I~IWDl~s~----------------------------------------------k~l~sl~gH~~~VtsLafSpDG~~L 784 (819)
|++||+.++ +.+..+.+|.+.|++++|+|+|++|
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999999764 5677788999999999999999999
Q ss_pred EEEeCCCcEEEEECCCCcee
Q psy10114 785 VTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 785 aSGS~DGtIrIWdl~s~~~~ 804 (819)
++|+.||.|++||+.+++..
T Consensus 322 ~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EEEETTSCEEEEEECTTSCE
T ss_pred EEecCCCcEEEEecCcCcch
Confidence 99999999999999987644
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-33 Score=299.96 Aligned_cols=276 Identities=19% Similarity=0.264 Sum_probs=216.0
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce---EE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK---QV 590 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk---~i 590 (819)
+.+++|+ ++.+++++.|+.|++||..+++...+..+.+|.+.|.+++|+|+|++|++|+.||.|++||+.+++ ..
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 93 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQT 93 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCE
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeee
Confidence 4445555 567888889999999999988655566788999999999999999999999999999999999877 67
Q ss_pred EEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc-cceEEEec-ccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 591 HKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS-QSERRLVG-HRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~-~~v~~l~g-H~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
..+.+|...|.+++| +++.|++|+.|+.|++||+++++. .....+.+ |...|.+++|+|++++|++|+.|+.|++|
T Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 173 (377)
T 3dwl_C 94 LVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVL 173 (377)
T ss_dssp EECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEE
T ss_pred eEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 778899999999999 577999999999999999988652 12456666 99999999999999999999999999999
Q ss_pred ECC------------------CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce----eEEE-c
Q psy10114 667 NLH------------------SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP----MQCV-D 723 (819)
Q Consensus 667 Dl~------------------t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~----v~~l-~ 723 (819)
|++ .++++..+ +|...|.+++|+|+++.+++.+ .|+.|++||+.+++. +..+ .
T Consensus 174 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (377)
T 3dwl_C 174 SAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAG---HDSSVTIAYPSAPEQPPRALITVKL 249 (377)
T ss_dssp EECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEE---TTTEEC-CEECSTTSCEEECCCEEC
T ss_pred EEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEe---CCCcEEEEECCCCCCcceeeEeecC
Confidence 985 24455666 8999999999999999666543 799999999999886 4444 4
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc--------------------------E-E---------EEE--
Q psy10114 724 TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT--------------------------Q-V---------AKL-- 765 (819)
Q Consensus 724 ~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k--------------------------~-l---------~sl-- 765 (819)
+...|.+++|+|+++.+++ |+.++.+ +|+..... . . ..+
T Consensus 250 ~~~~v~~~~~s~~~~~l~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (377)
T 3dwl_C 250 SQLPLRSLLWANESAIVAA--GYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRN 326 (377)
T ss_dssp SSSCEEEEEEEETTEEEEE--ESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------
T ss_pred CCCceEEEEEcCCCCEEEE--EcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccc
Confidence 5678999999999998887 6555555 66654111 0 0 011
Q ss_pred --------------ecCCCCEEEEEEecC-CC---EEEEEeCCCcEEEEEC
Q psy10114 766 --------------TGHSYRVLYLAMSPD-GE---AIVTGAGDETLRFWNV 798 (819)
Q Consensus 766 --------------~gH~~~VtsLafSpD-G~---~LaSGS~DGtIrIWdl 798 (819)
..|...|+++++.++ +. .|+||+.||.|++||+
T Consensus 327 ~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 327 MDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred hhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 129999999997654 33 6999999999999986
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-31 Score=285.08 Aligned_cols=285 Identities=21% Similarity=0.292 Sum_probs=230.2
Q ss_pred ceEEEEEecC---CeEEEEECCCeEEEEEcCCCceEEEEec-----------cCCCCCeEEEEEcC-CCCEEEEEecCce
Q psy10114 514 FYLNLVDWSS---QNVLSVGLGSCVYLWSACTSQVTRLCDL-----------SADGNSVTSVAWNE-RGNLVAVGTHHGY 578 (819)
Q Consensus 514 fyv~~ldwS~---~~LLa~g~Dg~V~LWd~~tg~~~~l~~l-----------~~h~~~VtsLafSp-dG~~LAsGs~DGt 578 (819)
-.+.+++|++ +.+++++.||.|++||..+++....... .+|...|.+++|+| ++++|++|+.||.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 3577778865 6799999999999999988754332221 35889999999999 7789999999999
Q ss_pred EEEeecCCceEEEEEecCCCCeEEEEeC-----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-
Q psy10114 579 VQVWDVSVAKQVHKLVGHTARVGALAWN-----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ- 652 (819)
Q Consensus 579 I~IWDl~tgk~i~tl~gHs~~V~sLawn-----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~- 652 (819)
|++||+.+++....+. +...+.++.+. +..+++|+.||.|++||+++++ ....+.+|...|.+++|+|+++
T Consensus 124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ 200 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS--CSHILQGHRQEILAVSWSPRYDY 200 (408)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC--CCEEECCCCSCEEEEEECSSCTT
T ss_pred EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc--eeeeecCCCCcEEEEEECCCCCc
Confidence 9999999999888877 77889999993 3489999999999999998865 3577889999999999999998
Q ss_pred EEEEEECCCeEEEEECCCCc-eeEEE---------------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 653 YLASGGNDNRLYVWNLHSMS-PLQTY---------------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 653 ~LaSGS~DGtI~IWDl~t~~-~i~t~---------------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
.+++|+.||.|++||++++. ++..+ ..|...|.+++|+|+++.+++++ .|+.|++||+.++
T Consensus 201 ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~ 277 (408)
T 4a11_B 201 ILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG---TDNRMRLWNSSNG 277 (408)
T ss_dssp EEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTC
T ss_pred EEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec---CCCeEEEEECCCC
Confidence 59999999999999998765 44444 56889999999999998766544 7999999999998
Q ss_pred ceeEEEcC------CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 717 QPMQCVDT------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 717 ~~v~~l~~------~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
+....... ...+........+..+++ +..++.|++||+.+++.+..+.+|.+.|++++|+|+|++|++|+.|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 278 ENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF--VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp CBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE--EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred ccceeccccccccccccceeEEecCCCceEEE--EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 76543321 111222222233445555 4578999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCceecc
Q psy10114 791 ETLRFWNVFSKVRSQR 806 (819)
Q Consensus 791 GtIrIWdl~s~~~~~k 806 (819)
|.|++||+.+++....
T Consensus 356 g~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 356 CNILAWVPSLYEPVPD 371 (408)
T ss_dssp SCEEEEEECC------
T ss_pred CeEEEEeCCCCCccCC
Confidence 9999999998876543
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-31 Score=287.95 Aligned_cols=244 Identities=25% Similarity=0.444 Sum_probs=211.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC------------------CeEEEEe--CCceeee
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA------------------RVGALAW--NGDMLSS 612 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~------------------~V~sLaw--ng~~LaS 612 (819)
+|.+.|.+++|+|+|++||+|+ ++.+++|++.+++.+..+.+|.. .|.+++| ++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 5889999999999999999987 68899999999999888876542 3899999 5779999
Q ss_pred ccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcC-
Q psy10114 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP- 691 (819)
Q Consensus 613 GS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP- 691 (819)
|+.||.|++||+.+++ ....+.+|...|.+++|+|++++|++|+.|++|++||+++++....+. +...+.+++|+|
T Consensus 141 ~~~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EcCCCeEEEEECCCCc--EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 9999999999998765 457788999999999999999999999999999999999998887776 567899999999
Q ss_pred CCCeEEEEEccCCCCeEEEEECCCCceeEEE--------cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC----
Q psy10114 692 HHHGLLASGGGTADRCIRFWNTLTGQPMQCV--------DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL---- 759 (819)
Q Consensus 692 dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--------~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~---- 759 (819)
++. ++++|+ .|+.|++||+++++.+..+ .+...|.+++|+|+++.+++ |+.|+.|++||+.+.
T Consensus 218 ~~~-~l~~~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s--~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 218 DGK-YIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS--GSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp TCC-EEEEEE--TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE--EETTSEEEEEEC-------
T ss_pred CCC-EEEEEc--CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE--EeCCCEEEEEECCCCCCcc
Confidence 555 555655 8999999999999887765 35678999999999999998 889999999998753
Q ss_pred --------cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 760 --------TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 760 --------k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
.....+.+|...|.+++|++++++|++|+.||.|++||+.+++...
T Consensus 293 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 293 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp --------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 3456788999999999999999999999999999999999887543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=293.14 Aligned_cols=246 Identities=20% Similarity=0.368 Sum_probs=205.3
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEEC
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi 624 (819)
+.+|.+.|++++|+++|++||+|+.||+|+|||+.+++ .+..+.+|.+.|.+++|+ ++.|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 46799999999999999999999999999999998775 567889999999999994 679999999999999999
Q ss_pred CCCCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCCce---eEEEecCCCCEEEEEEcCCC------
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSMSP---LQTYTEHLAAVKAIAWSPHH------ 693 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~~~---i~t~~~h~~~VtsLafSPdg------ 693 (819)
++++......+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+.. ...+.+|...|.+++|+|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 88754556678899999999999997 78999999999999999987632 34556889999999999983
Q ss_pred ----------CeEEEEEccCCCCeEEEEECCCCc---eeEEE-cCCCCeEEEEEccCC----CEEEEEEecCCCeEEEEE
Q psy10114 694 ----------HGLLASGGGTADRCIRFWNTLTGQ---PMQCV-DTGSQVCNLAWSKHS----SELVSTHGYSQNQILVWK 755 (819)
Q Consensus 694 ----------~~LLaSGgGs~DgtIrIWDl~tg~---~v~~l-~~~s~V~sLafSpdg----~~LastsGssDg~I~IWD 755 (819)
..++++|+ .|++|++||++++. .+..+ .|...|.+++|+|++ +.+++ ++.|+.|++||
T Consensus 169 ~~~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las--~s~D~~v~iw~ 244 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS--CSQDGRVFIWT 244 (316)
T ss_dssp --CCSCCCCCCCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE--EETTCEEEEEE
T ss_pred ccccccCccccceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEE--EcCCCeEEEEE
Confidence 13566655 89999999997652 34444 466789999999987 67777 78999999999
Q ss_pred CCCCc----EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 756 YPTLT----QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 756 l~s~k----~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
+.+.. ....+.+|.+.|.+++|+|+|++|++|+.||+|++|+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 87631 2234567899999999999999999999999999999863
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-30 Score=279.97 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=206.1
Q ss_pred EEEeccCCCCCeEEEEE-----cC-CCCEEEEEecCceEEEeecCC-------ceEEEEEecCCCCeEEEEe--CCceee
Q psy10114 547 RLCDLSADGNSVTSVAW-----NE-RGNLVAVGTHHGYVQVWDVSV-------AKQVHKLVGHTARVGALAW--NGDMLS 611 (819)
Q Consensus 547 ~l~~l~~h~~~VtsLaf-----Sp-dG~~LAsGs~DGtI~IWDl~t-------gk~i~tl~gHs~~V~sLaw--ng~~La 611 (819)
....+.+|.+.|++++| ++ ++++|++|+.||+|++||+.+ +.....+.+|...|.+++| ++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 34567899999999999 76 899999999999999999874 3567788999999999999 467999
Q ss_pred eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe---cCCCCEEEEE
Q psy10114 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT---EHLAAVKAIA 688 (819)
Q Consensus 612 SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~---~h~~~VtsLa 688 (819)
+|+.|++|++||+++++ ....+.+|...|.+++|+|++++|++|+.|++|++||+.. ....... +|...|.+++
T Consensus 93 s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEE
T ss_pred EEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeee
Confidence 99999999999999865 4577889999999999999999999999999999999974 3333333 6888999999
Q ss_pred EcCCCC---------eEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 689 WSPHHH---------GLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 689 fSPdg~---------~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
|+|++. .++++++ .|+.|++||. +++....+ .+...|.+++|+|+|+++++ |+.|+.|++||+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~s--gs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVG--WDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIAT--GGKDKKLLIWDILN 244 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEE--TTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEE--EETTCEEEEEESSC
T ss_pred eccccccccccCCCCCEEEEEc--CCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEE--EcCCCeEEEEECCC
Confidence 999873 3566665 8999999995 44444444 57788999999999999999 88999999999954
Q ss_pred -CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 759 -LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 759 -~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
......+ .+...|.+++|+|+++++++| .|+.|++||+.+++.
T Consensus 245 ~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 245 LTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSK 288 (343)
T ss_dssp CSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCS
T ss_pred Ccccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCC
Confidence 3344444 355679999999999887654 588899999987654
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-31 Score=282.45 Aligned_cols=247 Identities=19% Similarity=0.336 Sum_probs=213.3
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC--CceEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEE
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS--VAKQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRD 623 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~--tgk~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWD 623 (819)
.+.+|.+.|++++|+|+|++||+|+.||.|+|||+. +++.+..+.+|...|.+++|+ +++|++|+.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 456899999999999999999999999999999998 667888999999999999994 78999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCCc--eeEEEecCCCCEEEEEEcC--------
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSMS--PLQTYTEHLAAVKAIAWSP-------- 691 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~~--~i~t~~~h~~~VtsLafSP-------- 691 (819)
+++++......+.+|...|.+++|+|+ ++++++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 998765566778889999999999999 9999999999999999998874 4456778999999999999
Q ss_pred -----CCCeEEEEEccCCCCeEEEEECCCCcee----EEE-cCCCCeEEEEEccC---CCEEEEEEecCCCeEEEEECCC
Q psy10114 692 -----HHHGLLASGGGTADRCIRFWNTLTGQPM----QCV-DTGSQVCNLAWSKH---SSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 692 -----dg~~LLaSGgGs~DgtIrIWDl~tg~~v----~~l-~~~s~V~sLafSpd---g~~LastsGssDg~I~IWDl~s 758 (819)
++.. +++++ .|+.|++||+++++.. ..+ .+...|.+++|+|+ ++.+++ ++.||.|++||+.+
T Consensus 166 ~~~~~~~~~-l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s--~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 166 HNGTKESRK-FVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDRTCIIWTQDN 240 (379)
T ss_dssp ----CTTCE-EEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTSCEEEEEESS
T ss_pred ccCCCCCCE-EEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE--EeCCCEEEEEeCCC
Confidence 4664 44554 7999999999876533 333 36788999999999 788888 77999999999987
Q ss_pred Cc---EEEEE--ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 759 LT---QVAKL--TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 759 ~k---~l~sl--~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+. ..... ..|...|.+++|+|+|++|++++.||.|++|++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 64 22222 348889999999999999999999999999999853
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-32 Score=294.70 Aligned_cols=281 Identities=19% Similarity=0.266 Sum_probs=232.5
Q ss_pred EEEecCCeEE---EEECCCeEEEEEcCCCce--EEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCc----
Q psy10114 518 LVDWSSQNVL---SVGLGSCVYLWSACTSQV--TRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVA---- 587 (819)
Q Consensus 518 ~ldwS~~~LL---a~g~Dg~V~LWd~~tg~~--~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tg---- 587 (819)
.+.++++.++ +++.||.|++|+...... .....+.+|.+.|++++|+| ++++|++|+.||.|++||+.++
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 3566766533 357799999999865422 12234678999999999999 9999999999999999999987
Q ss_pred ---eEEEEEecCCCCeEEEEeC--C-ceeeeccCCCeEEEEECCCCCccceEEE--ecccCCeEEEEECCCCCEEEEEEC
Q psy10114 588 ---KQVHKLVGHTARVGALAWN--G-DMLSSGSRDRMILQRDVRTPNSQSERRL--VGHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 588 ---k~i~tl~gHs~~V~sLawn--g-~~LaSGS~DGtI~IWDi~t~~~~~v~~l--~gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
+.+..+.+|...|.+++|+ + +.|++|+.||.|++||+++++ ....+ .+|...|.+++|+|++++|++++.
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 6788899999999999994 3 589999999999999999865 34666 789999999999999999999999
Q ss_pred CCeEEEEECCCCceeEEE-ecCCCC-EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce---eEEEcCCCCeEEEEEc
Q psy10114 660 DNRLYVWNLHSMSPLQTY-TEHLAA-VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP---MQCVDTGSQVCNLAWS 734 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t~-~~h~~~-VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~---v~~l~~~s~V~sLafS 734 (819)
||.|++||+++++.+..+ ..|.+. +.+++|+|++..+++..+++.|+.|++||+++++. ...+.+...+.+++|+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD 276 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc
Confidence 999999999999999988 678766 89999999987444432123799999999998764 3334567789999999
Q ss_pred cCCCEEEEEEecCCCeEEEEECCCCcE-EEEEec--CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 735 KHSSELVSTHGYSQNQILVWKYPTLTQ-VAKLTG--HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 735 pdg~~LastsGssDg~I~IWDl~s~k~-l~sl~g--H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
|+++.++++ |..|+.|++||+.+++. +..+.. |...|.+++|+|++.++++ .|+.+++|++.+++.
T Consensus 277 ~~~~~l~~~-g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 277 PDTNIVYLC-GKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TTTTEEEEE-ETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CCCCEEEEE-EcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 999999764 66799999999998874 555544 4589999999999998764 677999999987653
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-31 Score=288.38 Aligned_cols=279 Identities=10% Similarity=0.228 Sum_probs=224.2
Q ss_pred cCCcceEEEEEecC--CeEEEEECCCeEEEEEcCCCce---------EEEEeccCCC------------CCeEEEEEcCC
Q psy10114 510 LQDDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQV---------TRLCDLSADG------------NSVTSVAWNER 566 (819)
Q Consensus 510 l~dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~---------~~l~~l~~h~------------~~VtsLafSpd 566 (819)
+++.-.+.+++|++ +.+++++.||.|++||..+++. .....+.+|. +.|++++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 44455678888874 5799999999999999987652 2244667887 88999999999
Q ss_pred C--CEEEEEecCceEEEeecCCceEE---------------------------------------EE-EecCCCCeEEEE
Q psy10114 567 G--NLVAVGTHHGYVQVWDVSVAKQV---------------------------------------HK-LVGHTARVGALA 604 (819)
Q Consensus 567 G--~~LAsGs~DGtI~IWDl~tgk~i---------------------------------------~t-l~gHs~~V~sLa 604 (819)
+ ..|++|+.||.|++||+.+++.. +. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 89999999999999999775442 12 358999999999
Q ss_pred e--CCceeeeccCCCeEEEEECCCCCccceE-------EEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCce-
Q psy10114 605 W--NGDMLSSGSRDRMILQRDVRTPNSQSER-------RLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSP- 673 (819)
Q Consensus 605 w--ng~~LaSGS~DGtI~IWDi~t~~~~~v~-------~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~- 673 (819)
| +++.|++| .||.|++||++.... ... .+.+|...|.+++|+|++ +.|++|+.||.|++||+++++.
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 9 57789998 799999999985332 112 356899999999999998 9999999999999999999887
Q ss_pred ---eEEEecCCC------------CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-CceeEEEcCCCC----------
Q psy10114 674 ---LQTYTEHLA------------AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-GQPMQCVDTGSQ---------- 727 (819)
Q Consensus 674 ---i~t~~~h~~------------~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-g~~v~~l~~~s~---------- 727 (819)
+..+..|.. .|.+++|+|+++.++ +++ . +.|++||+++ ++++..+.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~--~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMM-TRD--Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEE-EEE--S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEE-Eee--C-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 788888876 999999999998665 443 5 9999999997 777776654332
Q ss_pred ------eEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC---------------------------------
Q psy10114 728 ------VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH--------------------------------- 768 (819)
Q Consensus 728 ------V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH--------------------------------- 768 (819)
+..++|+|+++.+++ |+.||.|++||+.+++.+ .+.+|
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s--~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMT--GSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDF 415 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEE--ECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCT
T ss_pred ccccccceEEEECCCCCEEEE--eccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCccccccccccccc
Confidence 334999999999988 889999999999988776 33332
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 769 SYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 769 ~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
...|.+++|+|+|+.||+++.|+ +++|.-
T Consensus 416 ~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 416 NKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp TSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred CCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 45688999999999999998875 777764
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-30 Score=281.08 Aligned_cols=247 Identities=22% Similarity=0.377 Sum_probs=202.1
Q ss_pred EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--eEEEEE-ec-CCCCeEEEEe--CCceeeeccCCCeEEE
Q psy10114 548 LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--KQVHKL-VG-HTARVGALAW--NGDMLSSGSRDRMILQ 621 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--k~i~tl-~g-Hs~~V~sLaw--ng~~LaSGS~DGtI~I 621 (819)
+..+.+|.+.|.+++|+++ +||+|+.||+|++||+..+ +....+ .+ |...|.+++| ++++|++|+.|++|++
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~i 84 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 4467789999999999987 9999999999999999875 456666 44 9999999999 4779999999999999
Q ss_pred EECCCCC-----ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC----ceeEEEecCCCCEEEEEEcCC
Q psy10114 622 RDVRTPN-----SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM----SPLQTYTEHLAAVKAIAWSPH 692 (819)
Q Consensus 622 WDi~t~~-----~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~----~~i~t~~~h~~~VtsLafSPd 692 (819)
||++... ......+.+|...|.+++|+|++++|++|+.|++|++||++.. +++..+.+|...|.+++|+|+
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS 164 (330)
T ss_dssp EEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS
T ss_pred EEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC
Confidence 9986421 2345678899999999999999999999999999999999432 467788899999999999999
Q ss_pred CCeEEEEEccCCCCeEEEEECCCC--ceeEEE-cCCCCeEEEEEccC--CCEEEEEEecCCCeEEEEECCCC--------
Q psy10114 693 HHGLLASGGGTADRCIRFWNTLTG--QPMQCV-DTGSQVCNLAWSKH--SSELVSTHGYSQNQILVWKYPTL-------- 759 (819)
Q Consensus 693 g~~LLaSGgGs~DgtIrIWDl~tg--~~v~~l-~~~s~V~sLafSpd--g~~LastsGssDg~I~IWDl~s~-------- 759 (819)
+..++ +++ .|++|++||..++ +++..+ .+...|.+++|+|+ +..+++ |+.|+.|++||+.++
T Consensus 165 ~~~l~-s~s--~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s--~s~D~~v~iw~~~~~~~~~~~~~ 239 (330)
T 2hes_X 165 EALLA-SSS--YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS--GSDDSTVRVWKYMGDDEDDQQEW 239 (330)
T ss_dssp SSEEE-EEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE--EETTSCEEEEEEEEECTTSCEEE
T ss_pred CCEEE-EEc--CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE--EeCCCeEEEEEecCCCcccccee
Confidence 98554 444 8999999998876 456666 46788999999999 567777 789999999998654
Q ss_pred cEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 760 TQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 760 k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.....+.+ |...|.+++|++++ +|++|+.||+|++||..+++
T Consensus 240 ~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 240 VCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred EEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 33444554 89999999999765 89999999999999987763
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=312.73 Aligned_cols=273 Identities=10% Similarity=0.146 Sum_probs=215.7
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEE--EEeccCCCCCeEEEEEcCC------CCEEEEEecCceEEEeecCCceE-----
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTR--LCDLSADGNSVTSVAWNER------GNLVAVGTHHGYVQVWDVSVAKQ----- 589 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~--l~~l~~h~~~VtsLafSpd------G~~LAsGs~DGtI~IWDl~tgk~----- 589 (819)
++.+++++.|+.|+|||..+++... ...+.+|.+.|.+++|+|+ +.+||+|+.||+|++||+.+++.
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 4568889999999999998876421 2335567889999999996 57999999999999999976632
Q ss_pred ------EEEEecCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEE--EECCCC-CEEEEEEC
Q psy10114 590 ------VHKLVGHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL--KWSPDN-QYLASGGN 659 (819)
Q Consensus 590 ------i~tl~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsL--afSpdg-~~LaSGS~ 659 (819)
...+.+|...|.+++|+ ++.|++|+.||+|++||++++.. ....+.+|...|.++ +|++++ ++||+|+.
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 24678999999999994 56899999999999999987642 345688999999999 578887 89999999
Q ss_pred CCeEEEEECCCCceeEEEecCCC--CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-cCCCCeEEEEEccC
Q psy10114 660 DNRLYVWNLHSMSPLQTYTEHLA--AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-DTGSQVCNLAWSKH 736 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t~~~h~~--~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~~~s~V~sLafSpd 736 (819)
|++|++||++++++...+.+|.. .|.+++|+|+++.++ +++ .|++|++||++++.++..+ .+.+.|.+++|+|+
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~-s~~--~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI-YSD--GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE-EEC--SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred CCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEE-EeC--CCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 99999999999888777777653 588999999998655 443 7999999999999876655 67889999999999
Q ss_pred CCEEEEEEecCCCeEEEEECCC--------------------------------------------CcEEEEEecCCCCE
Q psy10114 737 SSELVSTHGYSQNQILVWKYPT--------------------------------------------LTQVAKLTGHSYRV 772 (819)
Q Consensus 737 g~~LastsGssDg~I~IWDl~s--------------------------------------------~k~l~sl~gH~~~V 772 (819)
|+.+++ |+.|+.|++||... +..+..+.+|...|
T Consensus 409 g~~l~S--gs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V 486 (524)
T 2j04_B 409 HPMVLA--GSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINI 486 (524)
T ss_dssp CCBCEE--EETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSC
T ss_pred CCeEEE--EECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceE
Confidence 999998 88999999887421 11233455788899
Q ss_pred EEEEEecCCC---EEEEEeCCCcEEEEECCCC
Q psy10114 773 LYLAMSPDGE---AIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 773 tsLafSpDG~---~LaSGS~DGtIrIWdl~s~ 801 (819)
.+++|+|+++ .+++|+.||.||||++...
T Consensus 487 ~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 487 TCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 9999999954 9999999999999998654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-30 Score=296.13 Aligned_cols=278 Identities=17% Similarity=0.234 Sum_probs=226.2
Q ss_pred ceEEEEEecCC---eEEEEECCCeEEEEEcCCCceEEEEeccCCCC---CeEEEEEcCC-CCEEEEEecCceEEEeecCC
Q psy10114 514 FYLNLVDWSSQ---NVLSVGLGSCVYLWSACTSQVTRLCDLSADGN---SVTSVAWNER-GNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 514 fyv~~ldwS~~---~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~---~VtsLafSpd-G~~LAsGs~DGtI~IWDl~t 586 (819)
..+.++.|+++ .+++++.|+.|++||..+++... .+.+|.+ .|++++|+|+ |++|++|+.||.|++||+.+
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS 238 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 35777888754 69999999999999998876544 5677888 9999999999 99999999999999999999
Q ss_pred ceEEEEE-e---cCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCcc-------------------------------
Q psy10114 587 AKQVHKL-V---GHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQ------------------------------- 630 (819)
Q Consensus 587 gk~i~tl-~---gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~------------------------------- 630 (819)
++.+..+ . +|...|.+++| +++.+++++.||.|++||+++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 318 (615)
T 1pgu_A 239 GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 318 (615)
T ss_dssp CCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred CCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC
Confidence 9999999 6 89999999999 6779999999999999999864311
Q ss_pred ------------ceEEEecccCCeEEEEECC---------------------------------C---------------
Q psy10114 631 ------------SERRLVGHRQEVCGLKWSP---------------------------------D--------------- 650 (819)
Q Consensus 631 ------------~v~~l~gH~~~VtsLafSp---------------------------------d--------------- 650 (819)
....+.+|...|.+++| | +
T Consensus 319 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~ 397 (615)
T 1pgu_A 319 GTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKV 397 (615)
T ss_dssp SCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEE
T ss_pred CCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEE
Confidence 11122233333333333 2 1
Q ss_pred ----------------------------------------------------------CCEEEEEEC-CCeEEEEECCCC
Q psy10114 651 ----------------------------------------------------------NQYLASGGN-DNRLYVWNLHSM 671 (819)
Q Consensus 651 ----------------------------------------------------------g~~LaSGS~-DGtI~IWDl~t~ 671 (819)
++++++++. |+.|++||+.++
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~ 477 (615)
T 1pgu_A 398 NGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL 477 (615)
T ss_dssp TTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE
T ss_pred EEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCc
Confidence 334444444 555555555554
Q ss_pred cee-EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--CCCCeEEEEEcc----------CCC
Q psy10114 672 SPL-QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSK----------HSS 738 (819)
Q Consensus 672 ~~i-~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSp----------dg~ 738 (819)
+.. ..+..|...|.+++|+|+++.+++.+ .|+.|++||+.+++.+..+. +...|.+++|+| +++
T Consensus 478 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 478 EVSFDLKTPLRAKPSYISISPSETYIAAGD---VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp EEEEECSSCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred cccccccCCccCceEEEEECCCCCEEEEcC---CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCC
Confidence 433 45567899999999999999665543 79999999999999988875 788899999999 999
Q ss_pred EEEEEEecCCCeEEEEECCCC-cEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 739 ELVSTHGYSQNQILVWKYPTL-TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s~-k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
.+++ ++.|+.|++||+.++ +.+..+.+|.+.|++++|+|+|+ |++++.||.|++|++..
T Consensus 555 ~l~~--~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 555 LVAT--GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEE--EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEEE--EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999 789999999999988 78888999999999999999999 99999999999999875
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-30 Score=286.89 Aligned_cols=273 Identities=18% Similarity=0.231 Sum_probs=237.3
Q ss_pred CcceEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEc--CCCCEEEEEecCceEEEeecCCce
Q psy10114 512 DDFYLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWN--ERGNLVAVGTHHGYVQVWDVSVAK 588 (819)
Q Consensus 512 dDfyv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafS--pdG~~LAsGs~DGtI~IWDl~tgk 588 (819)
+...+.++.|+++ .+++++.|+.|++||..+++... .+.+|.+.|.+++|+ ++++++++|+.||.|++||+.+++
T Consensus 161 h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 161 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTH--VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp CSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred CCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEE--EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 4456888888854 89999999999999999987544 677899999999998 578999999999999999998765
Q ss_pred -----------------------EEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEE
Q psy10114 589 -----------------------QVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645 (819)
Q Consensus 589 -----------------------~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsL 645 (819)
.+..+.+|...|.++..+++.+++|+.||.|++||+++++ ....+.+|...|.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~ 316 (464)
T 3v7d_B 239 SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK--CLYILSGHTDRIYST 316 (464)
T ss_dssp CC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEE
T ss_pred ccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCCCCCEEEE
Confidence 2567789999999999999999999999999999998765 457788999999999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC
Q psy10114 646 KWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725 (819)
Q Consensus 646 afSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~ 725 (819)
+|+|+++.+++|+.||.|++||+++++++..+.+|...|.+++|++ . .+++++ .||.|++||+.+++......+.
T Consensus 317 ~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s--~dg~v~vwd~~~~~~~~~~~~~ 391 (464)
T 3v7d_B 317 IYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD--K-FLVSAA--ADGSIRGWDANDYSRKFSYHHT 391 (464)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS--S-EEEEEE--TTSEEEEEETTTCCEEEEEECT
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC--C-EEEEEe--CCCcEEEEECCCCceeeeecCC
Confidence 9999999999999999999999999999999999999999999984 4 455554 8999999999999888888888
Q ss_pred CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEE-EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAK-LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 726 s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~s-l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
..+..++|+++++.+++ |+ |+.|++||+.+++.+.. +.+|.+.|.+++|+ ++..+++++.||.+.+|-
T Consensus 392 ~~~~~~~~~~~~~~l~~--~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 392 NLSAITTFYVSDNILVS--GS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TCCCEEEEEECSSEEEE--EE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCccEEEEEeCCCEEEE--ec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 88999999999999888 54 89999999999999876 56789999999997 344555566677655543
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=282.76 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=215.0
Q ss_pred eccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceEEEEEe--cCCCCeEEEEeCC---ceeeeccCCCeEEEEE
Q psy10114 550 DLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQVHKLV--GHTARVGALAWNG---DMLSSGSRDRMILQRD 623 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~i~tl~--gHs~~V~sLawng---~~LaSGS~DGtI~IWD 623 (819)
.+.+|.+.|++++|+|+| ++|++|+.||.|+|||+.+++....+. +|...|.+++|++ +.|++|+.||.|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 567889999999999999 999999999999999999888777776 6999999999954 6999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
+++..........+|...|.+++|+|+++++++|+.||.|++||+ +++++..+.+|...|.+++|+|+++.++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-- 224 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSS-- 224 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEE--
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEe--
Confidence 986332222222334588999999999999999999999999999 57888999999999999999999996677765
Q ss_pred CCCeEEEEECCC----CceeEEEcCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC---------
Q psy10114 704 ADRCIRFWNTLT----GQPMQCVDTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS--------- 769 (819)
Q Consensus 704 ~DgtIrIWDl~t----g~~v~~l~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~--------- 769 (819)
.|+.|++||+++ +..+..+.+...|.+++|+| +++.+++ ++.|+.|++||+.+++....+.+|.
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLT--TDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTP 302 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEE--EESSSEEEEEETTBTTSCSEEEECCBCCCTTSCC
T ss_pred CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEE--EcCCCcEEEEECCCCccccccccccccccccccc
Confidence 899999999998 67777788899999999999 9999998 7789999999999888877776553
Q ss_pred --------CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 770 --------YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 770 --------~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+.+..++|+|||++ +|+.||.|++||+.+++.....
T Consensus 303 ~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 303 IKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp CCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred eEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 34555777777777 7889999999999988765443
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-30 Score=277.31 Aligned_cols=242 Identities=17% Similarity=0.262 Sum_probs=215.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC
Q psy10114 553 ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 553 ~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~ 628 (819)
.|.+.|++++|+|+|++|++|+.||.|++||+++++ .+..+.+|...|.+++| +++.|++|+.||.|++||+++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 478899999999999999999999999999999987 88999999999999999 57899999999999999998876
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce---eEEE-ecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP---LQTY-TEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~---i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
......+..|...|.+++|+|+++++++|+.||.|++||++.++. ...+ ..|...|.+++|+|++..+++ ++ .
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~--~ 162 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA-GS--C 162 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE-EE--T
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE-Ec--C
Confidence 444455678999999999999999999999999999999988773 3333 568899999999999986555 43 7
Q ss_pred CCeEEEEECC------------------CCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 705 DRCIRFWNTL------------------TGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 705 DgtIrIWDl~------------------tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
|+.|++||++ +++.+..+ .+...+.+++|+|+++.+++ ++.|+.|++||+.+++.+..+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW--VSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE--EETTTEEEEEEGGGTTEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE--EeCCCEEEEEECCCCceeEEE
Confidence 9999999954 56777777 46778999999999999998 779999999999999999999
Q ss_pred ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 766 TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 766 ~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
.+|...|.+++|+|+|+++++| .|+.|++|++.+
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999999999988877 999999999988
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.4e-30 Score=304.78 Aligned_cols=280 Identities=19% Similarity=0.279 Sum_probs=246.3
Q ss_pred eEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+.+++|++ +.+++++.+|.|++||..+++... .+.+|.+.|++++|+|+|++|++|+.||.|++||+.+++.+..
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE--EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 467777774 579999999999999999987654 5667899999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECC
Q psy10114 593 LVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 593 l~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~ 669 (819)
+.+|.+.|.+++| ++..|++|+.||.|++||++++. .....+.+|...|.+++|+| +++.+++++.||.|++||++
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 9999999999999 46689999999999999998764 34577889999999999999 88999999999999999999
Q ss_pred CCceeEEEecCC-CCEEEEEEcC--CCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEe
Q psy10114 670 SMSPLQTYTEHL-AAVKAIAWSP--HHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 670 t~~~i~t~~~h~-~~VtsLafSP--dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsG 745 (819)
+++....+..+. ..+.+++|+| ++..+++ ++ .|+.|++||+.+++.+..+. +...|.+++|+|+++.+++ +
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~--~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~ 246 (814)
T 3mkq_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT-AS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS--G 246 (814)
T ss_dssp CSSCSEEEECCCTTCCCEEEECCSTTCCEEEE-EC--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE--E
T ss_pred CCcceeEEecCCCCCEEEEEEEECCCCCEEEE-Ee--CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE--E
Confidence 988888877655 8999999999 7775554 44 79999999999999888875 6778999999999999998 7
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE-EEEEeCCCcEEEEECCCCc
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA-IVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~-LaSGS~DGtIrIWdl~s~~ 802 (819)
+.||.|++||..+++.+..+..|...+.+++|+|+|+. +++++.|+.+.+|++....
T Consensus 247 ~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 78999999999999999999999999999999999873 2444457778999987644
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-30 Score=279.29 Aligned_cols=251 Identities=18% Similarity=0.258 Sum_probs=221.3
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce------EEEEEecCCCCeEEEEe--C----C---ceeeec
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------QVHKLVGHTARVGALAW--N----G---DMLSSG 613 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk------~i~tl~gHs~~V~sLaw--n----g---~~LaSG 613 (819)
..+.+|.+.|++++|+| ++|++|+.||.|++||+.+++ .+..+.+|...|.+++| + + +.|++|
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 45778999999999998 799999999999999999887 78889999999999999 4 6 799999
Q ss_pred cCCCeEEEEECCCCCcc---ceEEEecc-----cCCeEEEEEC----CCCCE-EEEEECCCeEEEEECCC------Ccee
Q psy10114 614 SRDRMILQRDVRTPNSQ---SERRLVGH-----RQEVCGLKWS----PDNQY-LASGGNDNRLYVWNLHS------MSPL 674 (819)
Q Consensus 614 S~DGtI~IWDi~t~~~~---~v~~l~gH-----~~~VtsLafS----pdg~~-LaSGS~DGtI~IWDl~t------~~~i 674 (819)
+.||.|++||+.+++.. ....+..| ...|.+++|+ |+++. |++|+.||.|++||+++ ++.+
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 99999999999876530 14667778 5899999999 99999 99999999999999998 6666
Q ss_pred E-----EE-------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-------CCCeEEEEEcc
Q psy10114 675 Q-----TY-------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-------GSQVCNLAWSK 735 (819)
Q Consensus 675 ~-----t~-------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-------~s~V~sLafSp 735 (819)
. .+ ..|...|.+++|+|++ ++++++ .|+.|++||+++++.+..+.. ...+.+++|+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 6 77 4488999999999999 555554 899999999999999888865 88999999999
Q ss_pred CCCEEEEEEecCC---CeEEEEECCCCcEEEEEec-------------CCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 736 HSSELVSTHGYSQ---NQILVWKYPTLTQVAKLTG-------------HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 736 dg~~LastsGssD---g~I~IWDl~s~k~l~sl~g-------------H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+++.+++ ++.| +.|++||+.+++.+..+.+ |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 244 ~~~~l~~--~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 244 QGSLLAI--AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp STTEEEE--EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCEEEE--EecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999998 6678 9999999999999999998 99999999999999999999999999999999
Q ss_pred CCceeccc
Q psy10114 800 SKVRSQRE 807 (819)
Q Consensus 800 s~~~~~k~ 807 (819)
+++.....
T Consensus 322 ~~~~~~~~ 329 (397)
T 1sq9_A 322 TKERITTL 329 (397)
T ss_dssp TTEEEEEE
T ss_pred CCceeEEE
Confidence 88765443
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-30 Score=271.36 Aligned_cols=239 Identities=21% Similarity=0.351 Sum_probs=201.2
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC--CCEEEEEecCceEEEeecCCce--
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER--GNLVAVGTHHGYVQVWDVSVAK-- 588 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd--G~~LAsGs~DGtI~IWDl~tgk-- 588 (819)
.+.+++|+ ++.+++++.|+.|++||..++....+..+.+|.+.|.+++|+++ |++|++|+.||+|++||+++++
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence 35555655 67899999999999999976543344578899999999999864 8999999999999999998874
Q ss_pred EEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC-------------C
Q psy10114 589 QVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-------------N 651 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd-------------g 651 (819)
.+..+.+|...|.+++|+ +..|++|+.||.|++||++.........+.+|...|.+++|+|+ +
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 170 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------C
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCc
Confidence 567788999999999994 56899999999999999987643334677899999999999997 5
Q ss_pred CEEEEEECCCeEEEEECCCCc----eeEEEecCCCCEEEEEEcCCC--CeEEEEEccCCCCeEEEEECCCCc--e-eEEE
Q psy10114 652 QYLASGGNDNRLYVWNLHSMS----PLQTYTEHLAAVKAIAWSPHH--HGLLASGGGTADRCIRFWNTLTGQ--P-MQCV 722 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~----~i~t~~~h~~~VtsLafSPdg--~~LLaSGgGs~DgtIrIWDl~tg~--~-v~~l 722 (819)
++|++|+.|++|++||+++++ ....+.+|...|.+++|+|++ ..++++++ .|++|++||++++. . ...+
T Consensus 171 ~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s--~D~~v~iWd~~~~~~~~~~~~~ 248 (297)
T 2pm7_B 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS--QDRTCIIWTQDNEQGPWKKTLL 248 (297)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEEEES
T ss_pred ceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE--CCCcEEEEEeCCCCCccceeee
Confidence 799999999999999998776 567788999999999999996 45677776 89999999998753 1 1222
Q ss_pred ---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 723 ---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 723 ---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
.+...|.+++|+|+|+.+++ ++.|+.|++|+..
T Consensus 249 ~~~~~~~~v~~~~~s~~g~~las--~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 249 KEEKFPDVLWRASWSLSGNVLAL--SGGDNKVTLWKEN 284 (297)
T ss_dssp SSSCCSSCEEEEEECSSSCCEEE--EETTSCEEEEEEC
T ss_pred ecccCCCcEEEEEECCCCCEEEE--EcCCCcEEEEEEC
Confidence 34678999999999999998 7789999999976
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-29 Score=289.37 Aligned_cols=276 Identities=16% Similarity=0.268 Sum_probs=240.3
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCC----ceEEEEeccCCCCC-eEEEEEcC--CCCEEEEEecCceEEEeecCC
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTS----QVTRLCDLSADGNS-VTSVAWNE--RGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg----~~~~l~~l~~h~~~-VtsLafSp--dG~~LAsGs~DGtI~IWDl~t 586 (819)
+.+++|+ ++.+++++ ++.|.+||..++ +.. ..+.+|.+. |++++|+| +|++|++|+.||.|++||+.+
T Consensus 21 v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~--~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPV--VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp CCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSE--EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred eeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccc--eEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 4455555 45666666 899999999987 544 357789999 99999999 999999999999999999975
Q ss_pred c--------eEEEEEecCCCCeEEEEe--CCceeeeccCC----CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 587 A--------KQVHKLVGHTARVGALAW--NGDMLSSGSRD----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 587 g--------k~i~tl~gHs~~V~sLaw--ng~~LaSGS~D----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
+ +....+.+|...|.+++| +++.+++++.+ +.|.+||. + .....+.+|...|.+++|+|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~--~~~~~~~~~~~~v~~~~~~~~~~ 173 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--G--NSLGEVSGHSQRINACHLKQSRP 173 (615)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--C--CEEEECCSCSSCEEEEEECSSSS
T ss_pred CcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--C--CcceeeecCCccEEEEEECCCCC
Confidence 4 778888899999999999 57789999887 78999983 2 24577889999999999999998
Q ss_pred -EEEEEECCCeEEEEECCCCceeEEEecCCC---CEEEEEEcCC-CCeEEEEEccCCCCeEEEEECCCCceeEEE-----
Q psy10114 653 -YLASGGNDNRLYVWNLHSMSPLQTYTEHLA---AVKAIAWSPH-HHGLLASGGGTADRCIRFWNTLTGQPMQCV----- 722 (819)
Q Consensus 653 -~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~---~VtsLafSPd-g~~LLaSGgGs~DgtIrIWDl~tg~~v~~l----- 722 (819)
.+++++.|+.|++||.++++.+..+.+|.. .|.+++|+|+ ++.+++ ++ .|+.|++||+++++.+..+
T Consensus 174 ~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~--~dg~i~vwd~~~~~~~~~~~~~~~ 250 (615)
T 1pgu_A 174 MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT-VG--SDRKISCFDGKSGEFLKYIEDDQE 250 (615)
T ss_dssp CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE-EE--TTCCEEEEETTTCCEEEECCBTTB
T ss_pred cEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE-Ee--CCCeEEEEECCCCCEeEEeccccc
Confidence 899999999999999999999999999999 9999999999 775554 43 7999999999999999988
Q ss_pred cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC----CCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH----SYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH----~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.+...|.+++|+ +++.+++ ++.|+.|++||+.+++.+..+..+ ...+.++.|+ +++++++|+.||.|++||+
T Consensus 251 ~~~~~v~~~~~~-~~~~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 251 PVQGGIFALSWL-DSQKFAT--VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp CCCSCEEEEEES-SSSEEEE--EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred ccCCceEEEEEc-CCCEEEE--EcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence 678899999999 9999998 778999999999999999999877 3678888886 8999999999999999999
Q ss_pred CCCceec
Q psy10114 799 FSKVRSQ 805 (819)
Q Consensus 799 ~s~~~~~ 805 (819)
.+++...
T Consensus 327 ~~~~~~~ 333 (615)
T 1pgu_A 327 GHDEVLK 333 (615)
T ss_dssp TEEEEEE
T ss_pred CCCcEEE
Confidence 8765443
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=265.05 Aligned_cols=256 Identities=18% Similarity=0.273 Sum_probs=224.5
Q ss_pred CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeE
Q psy10114 542 TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMI 619 (819)
Q Consensus 542 tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI 619 (819)
.|...+...+.+|.+.|++++|+|+|++|++|+.||.|++||+.+++.+..+.+|...|.+++| +++.|++++.||.|
T Consensus 19 ~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 19 QGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp SCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred eccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 3455566678899999999999999999999999999999999999999999999999999999 47799999999999
Q ss_pred EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECCCCc-----------eeEEEecCCC-
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLHSMS-----------PLQTYTEHLA- 682 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~t~~-----------~i~t~~~h~~- 682 (819)
++||+++++. ...+. +...|.+++|+|+++.+++++.+ |.|.+||++.+. ....+..|..
T Consensus 99 ~iwd~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 99 KLWDVSNGQC--VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEETTTCCE--EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EEEECCCCcE--EEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 9999998763 34444 88899999999999999999999 999999997654 3455556666
Q ss_pred -CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-CceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC
Q psy10114 683 -AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-GQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 683 -~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-g~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~ 759 (819)
.+.+++|+|+++.+++.+ .|+.|++||+++ ++.+..+. +...|.+++|+|+++.+++ ++.|+.|++||+.++
T Consensus 176 ~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGH---KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFIT--SSRDTNSFLVDVSTL 250 (369)
T ss_dssp CCEEEEEECGGGCEEEEEE---TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEE--EETTSEEEEEETTTC
T ss_pred cceeEEEEcCCCCEEEEEc---CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEE--ecCCceEEEEECCCC
Confidence 999999999998666543 799999999998 67776664 6788999999999999998 778999999999999
Q ss_pred cEEEEEecCCCCEEEEEEecCCCEEEEEeCCC--------------cEEEEECCCCceecc
Q psy10114 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE--------------TLRFWNVFSKVRSQR 806 (819)
Q Consensus 760 k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG--------------tIrIWdl~s~~~~~k 806 (819)
+.+..+. +...+.+++|+|+++++++++.++ .+++||+.+++....
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 251 QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 9998887 778899999999999999999998 899999988776543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=316.32 Aligned_cols=277 Identities=22% Similarity=0.358 Sum_probs=248.4
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
..+.++.|+ ++.+++++.||.|++||..+++... .+.+|.+.|.+++|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL--DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE--EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 346666776 5689999999999999999987654 677899999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 592 KLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
.+.+|...|.+++|+ +..+++|+.||.|++||+++++ ....+.+|.+.|.+++|+|+++.+++|+.||.|++||
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 999999999999994 3479999999999999999876 4577889999999999999999999999999999999
Q ss_pred CCCCceeEEEec-------------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--cCCCCeEEEE
Q psy10114 668 LHSMSPLQTYTE-------------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--DTGSQVCNLA 732 (819)
Q Consensus 668 l~t~~~i~t~~~-------------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~~s~V~sLa 732 (819)
+++++....+.. ....+.+++|+|+|..+++++ ++.+.+||+.++.....+ .+...+.+++
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA----KNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE----TTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc----CCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 998887766542 233788999999999776653 789999999999888777 4567899999
Q ss_pred EccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 733 WSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 733 fSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
|+|+++.+++ ++.++.|++||+.++..+..+.+|.+.|.+++|+|+|+++++++.||.|++|++.+
T Consensus 848 ~sp~~~~l~~--~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 848 FSPYDHLAVI--ALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp ECSSTTEEEE--ECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred EcCCCCEEEE--EeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 9999999999 88999999999999999999999999999999999999999999999999999764
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=267.15 Aligned_cols=272 Identities=13% Similarity=0.113 Sum_probs=228.0
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCc-eEEEEeccCCCCCeEEEEEcCCCC-EEEEEecCceEEEeec-CCce
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQ-VTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDV-SVAK 588 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~-~~~l~~l~~h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl-~tgk 588 (819)
-.+.+++|+ ++.+++++.|+.|++|+..+++ ......+.+|...|++++|+|+++ +|++|+.||.|++||+ ++++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 346667776 5689999999999999998877 111223447889999999999999 9999999999999999 7775
Q ss_pred EEEEEec--CCCCeEEEEeC-CceeeeccCCCeEEEEECCC---------CCccceEEEecccCCeEEEEECCCCCEEEE
Q psy10114 589 QVHKLVG--HTARVGALAWN-GDMLSSGSRDRMILQRDVRT---------PNSQSERRLVGHRQEVCGLKWSPDNQYLAS 656 (819)
Q Consensus 589 ~i~tl~g--Hs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t---------~~~~~v~~l~gH~~~VtsLafSpdg~~LaS 656 (819)
. ..+.+ |...|.+++|+ ++.+++++.||.|++||+++ .+. ...+. |...|.+++|++++ +++
T Consensus 92 ~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~--l~~ 165 (342)
T 1yfq_A 92 F-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN--SNNTK-VKNKIFTMDTNSSR--LIV 165 (342)
T ss_dssp E-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC--SSSSS-SCCCEEEEEECSSE--EEE
T ss_pred e-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCe--eeEEe-eCCceEEEEecCCc--EEE
Confidence 4 77788 99999999997 78999999999999999986 432 23333 88999999999887 999
Q ss_pred EECCCeEEEEECCC-Cc--eeEEEecCCCCEEEEEEcC-CCCeEEEEEccCCCCeEEEEECCCC------ceeEEEcC-C
Q psy10114 657 GGNDNRLYVWNLHS-MS--PLQTYTEHLAAVKAIAWSP-HHHGLLASGGGTADRCIRFWNTLTG------QPMQCVDT-G 725 (819)
Q Consensus 657 GS~DGtI~IWDl~t-~~--~i~t~~~h~~~VtsLafSP-dg~~LLaSGgGs~DgtIrIWDl~tg------~~v~~l~~-~ 725 (819)
++.|+.|++||+++ +. .......|...|.+++|+| ++..+++ ++ .||.|++||++.+ +....+.. .
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~-~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC-SS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE-EE--TTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEE-Ee--cCCcEEEEEEcCCCcccccccceeeeccc
Confidence 99999999999988 54 3344556888999999999 8886555 43 7999999999887 66666643 2
Q ss_pred ---------CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC-CCCEEEEEEecCCCEEEEEeCCCc-EE
Q psy10114 726 ---------SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH-SYRVLYLAMSPDGEAIVTGAGDET-LR 794 (819)
Q Consensus 726 ---------s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH-~~~VtsLafSpDG~~LaSGS~DGt-Ir 794 (819)
..|.+++|+|+++.+++ |+.||.|++||+.+++.+..+.+| .+.|.+++ ++|++|++|+.||. .+
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~ 318 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYT--AGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKT 318 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEE--EETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHH
T ss_pred ccccccccceeEEEEEEcCCCCEEEE--ecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccc
Confidence 38999999999999998 778999999999999999999998 99999999 99999999999998 55
Q ss_pred EEEC
Q psy10114 795 FWNV 798 (819)
Q Consensus 795 IWdl 798 (819)
.+..
T Consensus 319 ~~~~ 322 (342)
T 1yfq_A 319 NAAI 322 (342)
T ss_dssp CSSS
T ss_pred cccc
Confidence 5543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=288.62 Aligned_cols=240 Identities=14% Similarity=0.186 Sum_probs=202.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc--eEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCC-
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA--KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPN- 628 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg--k~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~- 628 (819)
+.+.|++++|+|+|++||+|+.||.|++||+.++ +.+..+.+|...|.+++| ++++|++|+.||.|++||+.+++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 4678999999999999999999999999999988 788889999999999999 46799999999999999999876
Q ss_pred ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc---eeEEEec-CCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS---PLQTYTE-HLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 629 ~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~---~i~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
......+.+|...|.+++|+|++++|++|+.|+.|++||+++++ ....+.. |...|.+++|+|+++.+++ ++ .
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~-~~--~ 166 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA-GC--A 166 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE-EE--S
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE-Ee--C
Confidence 34456778899999999999999999999999999999999887 4777887 9999999999999985554 44 7
Q ss_pred CCeEEEEECCC------------------CceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE----E
Q psy10114 705 DRCIRFWNTLT------------------GQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ----V 762 (819)
Q Consensus 705 DgtIrIWDl~t------------------g~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~----l 762 (819)
|+.|++||+.+ ++.+..+.+...|.+++|+|+++.+++ ++.|+.|++||+.+++. +
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAY--AGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEE--EETTTEEC-CEECSTTSCEEEC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEE--EeCCCcEEEEECCCCCCcceee
Confidence 99999999853 445555567788999999999999999 77999999999999887 7
Q ss_pred EEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 763 AKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 763 ~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
..+.+|...|.+++|+|+|++|++|+.|+.+ +|+..
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 8889999999999999999999988766665 66665
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=300.59 Aligned_cols=249 Identities=22% Similarity=0.358 Sum_probs=226.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|+|++||+|+.||.|+|||+.+++.+..+.+|.+.|.+++| +++.|++|+.||.|++||+.++
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 56778999999999999999999999999999999999999999999999999999 5779999999999999999887
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcC-CCCeEEEEEccCCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSP-HHHGLLASGGGTAD 705 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSP-dg~~LLaSGgGs~D 705 (819)
+ ....+.+|.+.|.+++|+|+++++++|+.||.|++||++++ .....+.+|...|.+++|+| ++. .+++++ .|
T Consensus 88 ~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~--~d 162 (814)
T 3mkq_A 88 E--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFASGC--LD 162 (814)
T ss_dssp C--EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE-EEEEEE--TT
T ss_pred c--EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC-EEEEEe--CC
Confidence 6 45778899999999999999999999999999999999887 67788889999999999999 555 555554 79
Q ss_pred CeEEEEECCCCceeEEEcC--CCCeEEEEEcc--CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCC
Q psy10114 706 RCIRFWNTLTGQPMQCVDT--GSQVCNLAWSK--HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l~~--~s~V~sLafSp--dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG 781 (819)
+.|++||+.+++....+.. ...+..++|+| +++.+++ |+.|+.|++||+.+++.+..+.+|...|.+++|+|+|
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~--~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT--ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEE--ECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEE--EeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 9999999998887776643 37799999999 8999998 8899999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCceec
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+++++|+.||.|++||+.+++...
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEE
Confidence 999999999999999999876543
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-30 Score=279.43 Aligned_cols=281 Identities=12% Similarity=0.111 Sum_probs=212.5
Q ss_pred cceEEEEEecC--CeEEEEECCC-------eEEEEEcCCCce--------EEEEeccCCCCCeEEEEEcCCCCEEEEEe-
Q psy10114 513 DFYLNLVDWSS--QNVLSVGLGS-------CVYLWSACTSQV--------TRLCDLSADGNSVTSVAWNERGNLVAVGT- 574 (819)
Q Consensus 513 Dfyv~~ldwS~--~~LLa~g~Dg-------~V~LWd~~tg~~--------~~l~~l~~h~~~VtsLafSpdG~~LAsGs- 574 (819)
+|.+.+++|++ ..+++||.|. .|++|++..+.. .....+.+|++.|.+++++ ++.+++|.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45566777764 4567766543 599999876531 2234577888899988875 55676664
Q ss_pred ----------cCceEEEeecCCceE----EEEEe-----cCCCCeEEEEe--CCceee--eccCCCeEEEEECCCCCccc
Q psy10114 575 ----------HHGYVQVWDVSVAKQ----VHKLV-----GHTARVGALAW--NGDMLS--SGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 575 ----------~DGtI~IWDl~tgk~----i~tl~-----gHs~~V~sLaw--ng~~La--SGS~DGtI~IWDi~t~~~~~ 631 (819)
.|+.+++|++.+.+. ..... .+...+.+++| +|++++ +++.|++|++||+++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~-- 169 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE-- 169 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--
Confidence 467899999865432 22222 24456888999 566654 566899999999998653
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE--EecCCCCEEEEEEcCCCCeEEEEEc-cCCCCeE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT--YTEHLAAVKAIAWSPHHHGLLASGG-GTADRCI 708 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGg-Gs~DgtI 708 (819)
...+ .|...|.+++|+|||+++++++.| .+.+|+..+++.+.. ...|...|.+++|+|++..+++++. +.....+
T Consensus 170 ~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 170 KFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 3444 477889999999999999999855 567777777766543 3468889999999999997776553 1111268
Q ss_pred EEEECCCCcee----EE-EcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE-ecCCCCEEEEEEecCCC
Q psy10114 709 RFWNTLTGQPM----QC-VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL-TGHSYRVLYLAMSPDGE 782 (819)
Q Consensus 709 rIWDl~tg~~v----~~-l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl-~gH~~~VtsLafSpDG~ 782 (819)
+.||+..+... .. ..+...|++++|+|+|+++++ |+.|+.|++||+.+++.+.++ .+|...|++++|||||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las--gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL--ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE--EETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCceEE--EcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 89998776542 22 246678999999999999999 889999999999999999886 68999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCC
Q psy10114 783 AIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 783 ~LaSGS~DGtIrIWdl~s~ 801 (819)
+|||||.|++|||||+...
T Consensus 326 ~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSEEEEEECCTT
T ss_pred EEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999654
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-30 Score=318.08 Aligned_cols=318 Identities=18% Similarity=0.282 Sum_probs=259.2
Q ss_pred ccchhhhcCCcccceeccCCCceeecCCCcCCcceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCe
Q psy10114 481 PKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSV 558 (819)
Q Consensus 481 ~~s~~Ll~s~~k~~r~I~~~P~kvLdap~l~dDfyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~V 558 (819)
++++.++....+...+++..........-..+...+.+++|+ ++.+++++.|+.|++||..+++... .+.+|.+.|
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~--~~~~~~~~v 702 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH--TYDEHSEQV 702 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--EEECCSSCE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE--EEcCCCCcE
Confidence 344455555555555665543211100001233456777776 4589999999999999999998654 566899999
Q ss_pred EEEEEcC--CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccce--
Q psy10114 559 TSVAWNE--RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSE-- 632 (819)
Q Consensus 559 tsLafSp--dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v-- 632 (819)
.+++|++ ++..+++|+.||.|++||+.+++.+..+.+|.+.|.+++| +++.+++|+.||.|++||++++.....
T Consensus 703 ~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 703 NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceec
Confidence 9999999 5569999999999999999999999999999999999999 577999999999999999876531100
Q ss_pred ---------------------------------------------------EEEecccCCeEEEEECCCCCEEEEEECCC
Q psy10114 633 ---------------------------------------------------RRLVGHRQEVCGLKWSPDNQYLASGGNDN 661 (819)
Q Consensus 633 ---------------------------------------------------~~l~gH~~~VtsLafSpdg~~LaSGS~DG 661 (819)
....+|...|.+++|+|+++.+++|+.||
T Consensus 783 ~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg 862 (1249)
T 3sfz_A 783 VKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQY 862 (1249)
T ss_dssp CCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSS
T ss_pred ccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCC
Confidence 11126788999999999999999999999
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-----------------------
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP----------------------- 718 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~----------------------- 718 (819)
.|++||+.+++.+..+.+|.+.|.+++|+|+++.+++++ .|+.|++||+.++..
T Consensus 863 ~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s---~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1249)
T 3sfz_A 863 CVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS---DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLA 939 (1249)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe---CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEE
Confidence 999999999999999999999999999999999766544 799999999653210
Q ss_pred ------e---------EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE
Q psy10114 719 ------M---------QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 719 ------v---------~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~ 783 (819)
. ........+.+++|+|+++.+++ |+.+|.|.+||+.+++....+.+|.+.|.+++|+|+|++
T Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~--g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 1017 (1249)
T 3sfz_A 940 VDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAF--GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT 1017 (1249)
T ss_dssp EESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEE--EETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSC
T ss_pred ecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEE--EcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCE
Confidence 0 01123467999999999999999 889999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCceec
Q psy10114 784 IVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
|++++.||.|++||+.+++...
T Consensus 1018 l~s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 1018 LISSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp EEEECSSSBEEEEETTTTEEEC
T ss_pred EEEEcCCCEEEEEECCCCceEE
Confidence 9999999999999999876543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=260.01 Aligned_cols=246 Identities=20% Similarity=0.297 Sum_probs=216.4
Q ss_pred EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEEC
Q psy10114 547 RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 547 ~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi 624 (819)
....+.+|.+.|++++| +++++|++|+.||.|++||+.+++....+..|...|.+++| +++.+++|+.||.|++|++
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 34578899999999999 99999999999999999999999999999999999999999 5779999999999999999
Q ss_pred CCCC-ccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcC-CCCeEEEEEcc
Q psy10114 625 RTPN-SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP-HHHGLLASGGG 702 (819)
Q Consensus 625 ~t~~-~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP-dg~~LLaSGgG 702 (819)
.... ......+.+|...|.+++| +++.+++++.||.|++|| .++....+..|...+.+++|+| ++.. +++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~- 162 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK-FLTAS- 162 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE-EEEEE-
T ss_pred eecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE-EEEEE-
Confidence 7653 2345677899999999999 678999999999999999 7778888999999999999999 6664 45554
Q ss_pred CCCCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 703 TADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
.|+.|++|| .++....+. +...+.+++|+|++. +++ ++.|+.|++||+++++.+..+.+|.+.|.+++|+|+
T Consensus 163 -~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 163 -ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FIS--CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp -TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred -CCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEE--ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 799999999 445555553 678899999999998 666 778999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 781 GEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 781 G~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
| .+++++.||.|++||+.+++....
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEE
T ss_pred C-CEEEEecCCEEEEEECCCCceeEE
Confidence 9 588999999999999998875543
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=259.14 Aligned_cols=264 Identities=22% Similarity=0.354 Sum_probs=219.1
Q ss_pred EEEEEcCCCceEEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCc-----eEEEEEecCCCCeEEEEe--C
Q psy10114 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVA-----KQVHKLVGHTARVGALAW--N 606 (819)
Q Consensus 535 V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tg-----k~i~tl~gHs~~V~sLaw--n 606 (819)
++++...+.+.....++.+|.+.|++|+|+|+ +++||+|+.||+|+|||+.++ .+.+.+.+|...|.+++| +
T Consensus 18 ~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp --------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence 55556555555555678999999999999997 689999999999999998754 457788999999999999 5
Q ss_pred CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee-EEEecCCCCEE
Q psy10114 607 GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL-QTYTEHLAAVK 685 (819)
Q Consensus 607 g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i-~t~~~h~~~Vt 685 (819)
+++|++|+.|+.|++|+..... .......+...+....++++++.+++|+.|+.+++||....... ....+|...+.
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~ 175 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVS 175 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEE
T ss_pred CCEEEEEcccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCccc
Confidence 7799999999999999998765 34566778888999999999999999999999999998766543 34567899999
Q ss_pred EEEEcCCCCe-EEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE
Q psy10114 686 AIAWSPHHHG-LLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA 763 (819)
Q Consensus 686 sLafSPdg~~-LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~ 763 (819)
.++|++++.. ++++++ .|+.|++||+++++.+..+. +...|.+++|+|+++.+++ |+.|+.|++||+.+.+.+.
T Consensus 176 ~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCG--WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCAS--GGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp EEEECSCSSSCEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTCEEEEEETTTTEEEE
T ss_pred ceEEccCCCCcEEEEEc--CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEE--EeCCCeEEEEEeccCceee
Confidence 9999988654 455655 89999999999999888774 6788999999999999998 7899999999999999998
Q ss_pred EEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 764 KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 764 sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.+.++ ..|.+++|+|++.++ +++.|+.|++||+.++.....
T Consensus 252 ~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~ 292 (340)
T 4aow_A 252 TLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDE 292 (340)
T ss_dssp EEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEE
T ss_pred eecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEe
Confidence 88755 579999999988655 566799999999988765433
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=284.54 Aligned_cols=245 Identities=14% Similarity=0.281 Sum_probs=205.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-----------EEEEEecCC------------CCeEEEEeC--C-
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-----------QVHKLVGHT------------ARVGALAWN--G- 607 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-----------~i~tl~gHs------------~~V~sLawn--g- 607 (819)
+.+.|++++|+|+|++||+|+.||.|+|||+.+++ ....+.+|. +.|.+++|+ +
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 46899999999999999999999999999999877 588899998 889999994 3
Q ss_pred -ceeeeccCCCeEEEEECCCCCcc-------------------------------------ceEE-EecccCCeEEEEEC
Q psy10114 608 -DMLSSGSRDRMILQRDVRTPNSQ-------------------------------------SERR-LVGHRQEVCGLKWS 648 (819)
Q Consensus 608 -~~LaSGS~DGtI~IWDi~t~~~~-------------------------------------~v~~-l~gH~~~VtsLafS 648 (819)
..|++|+.||.|++||+...... .... ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 57999999999999998763311 0012 36799999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCC-CceeE-------EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce--
Q psy10114 649 PDNQYLASGGNDNRLYVWNLHS-MSPLQ-------TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-- 718 (819)
Q Consensus 649 pdg~~LaSGS~DGtI~IWDl~t-~~~i~-------t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-- 718 (819)
|++++|++| .|+.|++||+++ ++.+. .+.+|...|.+++|+|++..++++|+ .|+.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS--SKGTIRLCDMRASALCD 263 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE--TTSCEEEEETTTCSSSC
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe--CCCeEEEEECcCCcccc
Confidence 999999998 899999999984 44444 25589999999999999944666665 899999999999886
Q ss_pred --eEEEcCCC-------------CeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEEEecCCCC-----------
Q psy10114 719 --MQCVDTGS-------------QVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAKLTGHSYR----------- 771 (819)
Q Consensus 719 --v~~l~~~s-------------~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~sl~gH~~~----------- 771 (819)
+..+.... .|.+++|+|+|+++++ ++. +.|++||+++ ++.+..+.+|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT--RDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE--EES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE--eeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 56665432 8999999999999998 656 9999999997 8888889888642
Q ss_pred ----EEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 772 ----VLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 772 ----VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
+..++|+|+|++|++|+.||.|++||+.+++..
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 334999999999999999999999999988754
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=268.94 Aligned_cols=248 Identities=13% Similarity=0.236 Sum_probs=210.1
Q ss_pred eccCCCCCeEEEEEcCCCCEE-EEEec---CceEEEeecCCceEEEEE-ecCCCCeEEEEeC-----CceeeeccCCCeE
Q psy10114 550 DLSADGNSVTSVAWNERGNLV-AVGTH---HGYVQVWDVSVAKQVHKL-VGHTARVGALAWN-----GDMLSSGSRDRMI 619 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~L-AsGs~---DGtI~IWDl~tgk~i~tl-~gHs~~V~sLawn-----g~~LaSGS~DGtI 619 (819)
.+.+|.+.|.+++|+|++..+ ++|+. ||.|++||+.+++..... .+|...|.+++|+ ++.|++|+.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 345689999999999999655 56665 999999999988766544 3799999999993 4789999999999
Q ss_pred EEEECCCCCccceEEEecccCCeEEEE------ECCCCCEEEEEECCCeEEEEECCCCc-eeEEEecCCC----CEEEEE
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQEVCGLK------WSPDNQYLASGGNDNRLYVWNLHSMS-PLQTYTEHLA----AVKAIA 688 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~VtsLa------fSpdg~~LaSGS~DGtI~IWDl~t~~-~i~t~~~h~~----~VtsLa 688 (819)
++||+.+++ .....+.+|...|.+++ |+++++.|++|+.||.|++||+++++ ++..+..|.+ .+.+++
T Consensus 93 ~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 93 HIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 999999876 24577889999999995 47899999999999999999999887 7888876655 899998
Q ss_pred ----EcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEcc---CCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 689 ----WSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSK---HSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 689 ----fSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSp---dg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
|+|++..+++. + .|+.|++||+++++......+...+.+++|+| +++.+++ |+.|+.|++||+++++.
T Consensus 172 ~~~~~~~~~~~l~~~-~--~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 172 FGNAYNQEERVVCAG-Y--DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA--TSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp EECCCC-CCCEEEEE-E--TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE--EESTTEEEEEEEEEEET
T ss_pred EEeccCCCCCEEEEE-c--cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE--ECCCCeEEEEeCcCCCc
Confidence 67888865554 3 79999999999999888888899999999999 8999998 77899999999987655
Q ss_pred EEEE-----ecCCCCEEEEEEecCCC-EEEEEeCCCcEEEEECCCCce
Q psy10114 762 VAKL-----TGHSYRVLYLAMSPDGE-AIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 762 l~sl-----~gH~~~VtsLafSpDG~-~LaSGS~DGtIrIWdl~s~~~ 803 (819)
...+ .+|...|.+++|+|+++ ++++|+.||.|++||+..+..
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 4444 48999999999999998 899999999999999986543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-29 Score=262.21 Aligned_cols=279 Identities=14% Similarity=0.157 Sum_probs=224.1
Q ss_pred cceEEEEEecC-----CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc
Q psy10114 513 DFYLNLVDWSS-----QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 513 Dfyv~~ldwS~-----~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg 587 (819)
.-.+.+++|++ +.+++++.|+.|++||..+........+.+|.+.|++++|+|++++|++|+.||.|++||++++
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC
Confidence 34578888885 4688999999999999988433333466789999999999999999999999999999999998
Q ss_pred eEEEEEecCCCCeEEEEe--C--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 588 KQVHKLVGHTARVGALAW--N--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 588 k~i~tl~gHs~~V~sLaw--n--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
+.+. +.+|...|.+++| + ++.+++|+.||.|++||+++++. ...+..+. .+.++.+. +..+++++.|+.+
T Consensus 119 ~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i 192 (368)
T 3mmy_A 119 QAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP--MMVLQLPE-RCYCADVI--YPMAVVATAERGL 192 (368)
T ss_dssp EEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC--SEEEECSS-CEEEEEEE--TTEEEEEEGGGCE
T ss_pred Ccee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE--EEEEecCC-CceEEEec--CCeeEEEeCCCcE
Confidence 8776 5679999999999 4 56899999999999999998763 35555553 56666665 4588999999999
Q ss_pred EEEECCCCceeEEEe--cCCCCEEEEEEcCCCCe---EEEEEccCCCCeEEEEECCCC---ceeEEEcCCC---------
Q psy10114 664 YVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHG---LLASGGGTADRCIRFWNTLTG---QPMQCVDTGS--------- 726 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~---LLaSGgGs~DgtIrIWDl~tg---~~v~~l~~~s--------- 726 (819)
.+||++......... .+...+.++++.++... .+++++ .|+.|++||++.. +.+..+....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 193 IVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp EEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC----CCC
T ss_pred EEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeeeeeeccccccccc
Confidence 999998765433322 23455666666555442 244544 8999999999987 4455543322
Q ss_pred ----CeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 727 ----QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 727 ----~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.|.+++|+|+++.+++ |+.||.|++||+.+++.+..+.+|...|.+++|+|||++|++|+.|+..+.|++...
T Consensus 271 ~~~~~v~~~~~sp~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 271 QDIYAVNGIAFHPVHGTLAT--VGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEECCEEEEEECTTTCCEEE--EETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCT
T ss_pred ccccceEEEEEecCCCEEEE--EccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCC
Confidence 6999999999999998 789999999999999999999999999999999999999999999987776665543
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=267.95 Aligned_cols=244 Identities=12% Similarity=0.157 Sum_probs=213.4
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce---EEEEEecCCCCeEEEEe--CCc-eeeeccCCCeEEEEEC
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK---QVHKLVGHTARVGALAW--NGD-MLSSGSRDRMILQRDV 624 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk---~i~tl~gHs~~V~sLaw--ng~-~LaSGS~DGtI~IWDi 624 (819)
..+|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+.+|...|.+++| +++ .+++|+.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 35789999999999999999999999999999998776 45566689999999999 578 8999999999999999
Q ss_pred -CCCCccceEEEec--ccCCeEEEEECCCCCEEEEEECCCeEEEEECCC---------CceeEEEecCCCCEEEEEEcCC
Q psy10114 625 -RTPNSQSERRLVG--HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS---------MSPLQTYTEHLAAVKAIAWSPH 692 (819)
Q Consensus 625 -~t~~~~~v~~l~g--H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t---------~~~i~t~~~h~~~VtsLafSPd 692 (819)
.+++ ...+.+ |...|.+++|+| ++.+++++.|+.|++||+++ ++++..+. |...|.+++|+|+
T Consensus 87 ~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 87 IGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS 161 (342)
T ss_dssp SSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred ccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence 7754 266778 999999999999 99999999999999999987 77777666 8899999999998
Q ss_pred CCeEEEEEccCCCCeEEEEECCC-Ccee---EEEcCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCC------cE
Q psy10114 693 HHGLLASGGGTADRCIRFWNTLT-GQPM---QCVDTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTL------TQ 761 (819)
Q Consensus 693 g~~LLaSGgGs~DgtIrIWDl~t-g~~v---~~l~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~------k~ 761 (819)
+ +++++ .|+.|++||+++ +... ....+...+.+++|+| +++.+++ |+.||.|++|++... +.
T Consensus 162 ~---l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~--~~~dg~i~i~~~~~~~~~~~~~~ 234 (342)
T 1yfq_A 162 R---LIVGM--NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC--SSIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp E---EEEEE--STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE--EETTSEEEEEECCTTCCSTTCTT
T ss_pred c---EEEEe--CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEE--EecCCcEEEEEEcCCCccccccc
Confidence 7 44444 799999999998 5532 3335677899999999 9999998 778999999999876 78
Q ss_pred EEEEecCCC---------CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 762 VAKLTGHSY---------RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 762 l~sl~gH~~---------~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
...+.+|.. .|.+++|+|++++|++|+.||.|++||+.+++....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh
Confidence 888888865 999999999999999999999999999998876544
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=308.01 Aligned_cols=157 Identities=12% Similarity=0.182 Sum_probs=132.4
Q ss_pred cceEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE-
Q psy10114 513 DFYLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV- 590 (819)
Q Consensus 513 Dfyv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i- 590 (819)
...+.++.|+++ .+++++.|+.|++||+.+++...... |.+.|++++|+|++++|++|+.||.|++||+++++..
T Consensus 58 ~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 58 RSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF---VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp CCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE---CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 346788888854 59999999999999999988755432 5678999999999999999999999999999988764
Q ss_pred ----------EEEecCCCCeEEEEeCC---ceeeeccCCCeEEEEECCCCCccceEEEecc------------------c
Q psy10114 591 ----------HKLVGHTARVGALAWNG---DMLSSGSRDRMILQRDVRTPNSQSERRLVGH------------------R 639 (819)
Q Consensus 591 ----------~tl~gHs~~V~sLawng---~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH------------------~ 639 (819)
..+.+|.+.|.+++|++ ..+++|+.||.| +||+++++. ...+..| .
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccC
Confidence 22357899999999964 589999999999 999998653 3444444 5
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
..|.+++|+|+|++||+|+.||+|++||+++++++.
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 779999999999999999999999999998887654
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-30 Score=271.74 Aligned_cols=239 Identities=21% Similarity=0.367 Sum_probs=200.4
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC--CCCEEEEEecCceEEEeecCCc--e
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVSVA--K 588 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~tg--k 588 (819)
.+.+++|+ ++.+++++.|+.|++||+.+++...+..+.+|.+.|.+++|++ ++++|++|+.||+|++||++++ +
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 46666665 6789999999999999999886655667889999999999986 4899999999999999999887 4
Q ss_pred EEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCc-cceEEEecccCCeEEEEECCC-------------
Q psy10114 589 QVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNS-QSERRLVGHRQEVCGLKWSPD------------- 650 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~-~~v~~l~gH~~~VtsLafSpd------------- 650 (819)
....+.+|...|.+++|+ +.+|++|+.||.|++||++.... .....+.+|...|.+++|+|+
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccccc
Confidence 677888999999999994 45899999999999999987532 123455789999999999997
Q ss_pred ----CCEEEEEECCCeEEEEECCCC---ceeEEEecCCCCEEEEEEcCCC---CeEEEEEccCCCCeEEEEECCCCc---
Q psy10114 651 ----NQYLASGGNDNRLYVWNLHSM---SPLQTYTEHLAAVKAIAWSPHH---HGLLASGGGTADRCIRFWNTLTGQ--- 717 (819)
Q Consensus 651 ----g~~LaSGS~DGtI~IWDl~t~---~~i~t~~~h~~~VtsLafSPdg---~~LLaSGgGs~DgtIrIWDl~tg~--- 717 (819)
+++|++|+.|++|++||++.. +++..+.+|...|.+++|+|++ ..++++++ .|++|++||+.+..
T Consensus 175 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s--~D~~v~iw~~~~~~~~~ 252 (316)
T 3bg1_A 175 KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS--QDGRVFIWTCDDASSNT 252 (316)
T ss_dssp CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE--TTCEEEEEECSSTTCCC
T ss_pred CccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc--CCCeEEEEEccCccccc
Confidence 478999999999999999765 4667788999999999999986 24666665 89999999997631
Q ss_pred -e-eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC
Q psy10114 718 -P-MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 718 -~-v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~ 757 (819)
. .....+...|.+++|+|+++.+++ ++.|+.|++|+..
T Consensus 253 ~~~~~~~~~~~~v~~v~~sp~g~~las--~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 253 WSPKLLHKFNDVVWHVSWSITANILAV--SGGDNKVTLWKES 292 (316)
T ss_dssp CBCCEEEECSSCEEEEEECTTTCCEEE--EESSSCEEEEEEC
T ss_pred hhhhhhhcCCCcEEEEEEcCCCCEEEE--EcCCCeEEEEEEC
Confidence 1 112246788999999999999998 7789999999975
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=282.13 Aligned_cols=264 Identities=19% Similarity=0.380 Sum_probs=220.3
Q ss_pred EEEcCCCceEEEEeccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCC----------ceEEEEEecCCCCeEEEEe
Q psy10114 537 LWSACTSQVTRLCDLSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSV----------AKQVHKLVGHTARVGALAW 605 (819)
Q Consensus 537 LWd~~tg~~~~l~~l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~t----------gk~i~tl~gHs~~V~sLaw 605 (819)
.+...++++... ....|.+.|++++|+|+ +.+||+|+.||.|++||+.+ .+.+..+.+|...|.+++|
T Consensus 111 ~~~~~~~~~~~~-~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 189 (430)
T 2xyi_A 111 GFGSVCGKIEIE-IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 189 (430)
T ss_dssp -------CEEEE-EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE
T ss_pred cccCCCCceEEE-EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe
Confidence 333444444332 34467899999999997 68999999999999999987 6778889999999999999
Q ss_pred C--Cc-eeeeccCCCeEEEEECCCCCcc-----ceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCC---ce
Q psy10114 606 N--GD-MLSSGSRDRMILQRDVRTPNSQ-----SERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSM---SP 673 (819)
Q Consensus 606 n--g~-~LaSGS~DGtI~IWDi~t~~~~-----~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~---~~ 673 (819)
+ +. .|++|+.||.|++||+...... ....+.+|...|.+++|+| ++..+++++.||.|++||++++ ++
T Consensus 190 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 190 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp CTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSC
T ss_pred CCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcc
Confidence 4 44 8999999999999999874321 1356678999999999999 7789999999999999999987 57
Q ss_pred eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-CceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-GQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 674 i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-g~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I 751 (819)
+..+..|...|.+++|+|++..++++|+ .||.|++||+++ ++++..+. +...|.+++|+|+++.++++ ++.|+.|
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s-~~~d~~i 346 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS-SGTDRRL 346 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEE-EETTSCC
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEE-EeCCCcE
Confidence 8888899999999999999998888876 899999999998 55666664 77899999999999764443 6789999
Q ss_pred EEEECCC--------------CcEEEEEecCCCCEEEEEEecCCC-EEEEEeCCCcEEEEECCCCcee
Q psy10114 752 LVWKYPT--------------LTQVAKLTGHSYRVLYLAMSPDGE-AIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 752 ~IWDl~s--------------~k~l~sl~gH~~~VtsLafSpDG~-~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
++||+.. .+.+....+|...|.+++|+|+++ ++++++.||.|++|++..+...
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 9999986 367778889999999999999999 9999999999999999865543
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=268.44 Aligned_cols=245 Identities=18% Similarity=0.325 Sum_probs=212.0
Q ss_pred ccCCCCCeEEEEEcCC----CCEEEEEecCceEEEeecCCceEEEEEec-----CCCCeEEEEeC------CceeeeccC
Q psy10114 551 LSADGNSVTSVAWNER----GNLVAVGTHHGYVQVWDVSVAKQVHKLVG-----HTARVGALAWN------GDMLSSGSR 615 (819)
Q Consensus 551 l~~h~~~VtsLafSpd----G~~LAsGs~DGtI~IWDl~tgk~i~tl~g-----Hs~~V~sLawn------g~~LaSGS~ 615 (819)
..+|.+.|++++|+|+ ...+++++.+|.|++||+.+++.+..+.. |...|.+++|+ +.+|++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3579999999999984 45677777788999999998887776664 56789999993 458999999
Q ss_pred CCeEEEEECCCCCccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEEE---ecCCCCEEEEEEcC
Q psy10114 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTY---TEHLAAVKAIAWSP 691 (819)
Q Consensus 616 DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~---~~h~~~VtsLafSP 691 (819)
||.|++||+.+++ ....+.+|...|.+++|+| ++++|++|+.||.|++||+++++.+..+ .+|...|.+++|+|
T Consensus 94 dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 94 RGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999998865 4577889999999999999 9999999999999999999999998888 68999999999999
Q ss_pred CCCeEEEEEccCCCCeEEEEECCCCceeEEEc-----------------------------CCCCeEEEEEccCCCEEEE
Q psy10114 692 HHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-----------------------------TGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 692 dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-----------------------------~~s~V~sLafSpdg~~Las 742 (819)
++..+++++ .|+.|++||+++++....+. +...|.+++|+ ++.+++
T Consensus 172 ~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 172 LGEKIMSCG---MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp TSSEEEEEE---TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred CCCEEEEec---CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 998666544 79999999999876543322 67889999998 778887
Q ss_pred EEecCCCeEEEEECCCCcE--------------EEEEecCCCCEEEEEEecC--CCEEEEEeCCCcEEEEECCCCcee
Q psy10114 743 THGYSQNQILVWKYPTLTQ--------------VAKLTGHSYRVLYLAMSPD--GEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~--------------l~sl~gH~~~VtsLafSpD--G~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
++.|+.|++||+.+++. +..+.+|...|.+++|+|+ |++|++|+.||.|++||+.+++..
T Consensus 247 --~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 247 --KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp --ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred --EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 78899999999987654 7888899999999999999 999999999999999999987643
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-28 Score=259.62 Aligned_cols=242 Identities=20% Similarity=0.348 Sum_probs=207.7
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC--CCEEEEEecCceEEEeecCCce--
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER--GNLVAVGTHHGYVQVWDVSVAK-- 588 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd--G~~LAsGs~DGtI~IWDl~tgk-- 588 (819)
.+.+++|+ ++.+++++.|+.|++||...+....+..+.+|.+.|++++|+++ +++|++|+.||.|++||+.+++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 92 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee
Confidence 46677777 56799999999999999986666666778899999999999987 9999999999999999999987
Q ss_pred EEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-------------CC
Q psy10114 589 QVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-------------DN 651 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-------------dg 651 (819)
.+..+.+|...|.+++|+ ++.+++|+.||.|++||++.........+.+|...|.+++|+| ++
T Consensus 93 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTT
T ss_pred EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 778888999999999994 6799999999999999999886556677889999999999999 69
Q ss_pred CEEEEEECCCeEEEEECCCCc----eeEEEecCCCCEEEEEEcCCC--CeEEEEEccCCCCeEEEEECCCCce---eEEE
Q psy10114 652 QYLASGGNDNRLYVWNLHSMS----PLQTYTEHLAAVKAIAWSPHH--HGLLASGGGTADRCIRFWNTLTGQP---MQCV 722 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~----~i~t~~~h~~~VtsLafSPdg--~~LLaSGgGs~DgtIrIWDl~tg~~---v~~l 722 (819)
+.+++|+.||.|++||+++++ ....+.+|...|.+++|+|++ ..++++++ .|+.|++||+++++. ....
T Consensus 173 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~ 250 (379)
T 3jrp_A 173 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWKKTLL 250 (379)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEEEES
T ss_pred CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe--CCCEEEEEeCCCCCccceeeee
Confidence 999999999999999998765 446777899999999999994 34555655 899999999998742 2222
Q ss_pred ---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 723 ---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 723 ---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k 760 (819)
.+...+.+++|+|+++.+++ ++.||.|++|++....
T Consensus 251 ~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 251 KEEKFPDVLWRASWSLSGNVLAL--SGGDNKVTLWKENLEG 289 (379)
T ss_dssp SSSCCSSCEEEEEECSSSCCEEE--EESSSSEEEEEEEETT
T ss_pred ccccCCCcEEEEEEcCCCCEEEE--ecCCCcEEEEeCCCCC
Confidence 25678999999999999998 6679999999987543
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-28 Score=271.39 Aligned_cols=241 Identities=15% Similarity=0.157 Sum_probs=202.0
Q ss_pred CCCeEEEEEcCCCCEE-EEEecCceEEEeecC--CceEEEEEe--cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 555 GNSVTSVAWNERGNLV-AVGTHHGYVQVWDVS--VAKQVHKLV--GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 555 ~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~--tgk~i~tl~--gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.|++++|+|+|++| ++|+.||.|++||+. +++.+..+. .|...|.+++| +++.|++|+.||.|++|++.+.
T Consensus 102 ~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~ 181 (450)
T 2vdu_B 102 YSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSI 181 (450)
T ss_dssp CCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC
T ss_pred CCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCc
Confidence 3479999999999996 899999999999999 888888886 67799999999 5779999999999999999876
Q ss_pred Ccc--ceEEEecccCCeEEEEECCC---CCEEEEEECCCeEEEEECCCCceeEE-EecCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 628 NSQ--SERRLVGHRQEVCGLKWSPD---NQYLASGGNDNRLYVWNLHSMSPLQT-YTEHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 628 ~~~--~v~~l~gH~~~VtsLafSpd---g~~LaSGS~DGtI~IWDl~t~~~i~t-~~~h~~~VtsLafSPdg~~LLaSGg 701 (819)
... ....+.+|...|.+++|+|+ +++|++|+.|++|++||+++++.+.. +.+|.+.|.+++|+ ++..++ +++
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~-s~~ 259 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL-SAG 259 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE-EEE
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE-EEe
Confidence 543 23367889999999999999 99999999999999999999998887 55899999999999 887555 444
Q ss_pred cCCCCeEEEEECCCCceeEEEcC--------------------------CCCeEEEEEccCCCEEEEEEecCCCeEEEEE
Q psy10114 702 GTADRCIRFWNTLTGQPMQCVDT--------------------------GSQVCNLAWSKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v~~l~~--------------------------~s~V~sLafSpdg~~LastsGssDg~I~IWD 755 (819)
.|+.|++||+++++.+..+.. ...+.+++|+|++++++++ +..++.|++|+
T Consensus 260 --~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~~~d~~i~iw~ 336 (450)
T 2vdu_B 260 --GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF-VEATKCIIILE 336 (450)
T ss_dssp --SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEE-ETTCSEEEEEE
T ss_pred --CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE-ECCCCeEEEEE
Confidence 799999999999998877742 2468999999999999984 23799999999
Q ss_pred C--CCC---cEEEEEecCCCCEEEEEEecCCCEEEEEeC------CCcEEEEECCCC
Q psy10114 756 Y--PTL---TQVAKLTGHSYRVLYLAMSPDGEAIVTGAG------DETLRFWNVFSK 801 (819)
Q Consensus 756 l--~s~---k~l~sl~gH~~~VtsLafSpDG~~LaSGS~------DGtIrIWdl~s~ 801 (819)
+ .++ +.+..+.+| +.|.+++|+|++.++++++. +..|++|.+...
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 9 555 677788888 88999999996544433332 556899987543
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-28 Score=289.50 Aligned_cols=248 Identities=21% Similarity=0.350 Sum_probs=214.3
Q ss_pred eccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCC-----ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEE
Q psy10114 550 DLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSV-----AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQ 621 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~t-----gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~I 621 (819)
.+.+|.+.|++++|++++ ++|++|+.||+|++||+.+ +...+.+.+|...|.+++| ++++|++|+.||+|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 467899999999999865 7999999999999999875 3466788999999999999 5779999999999999
Q ss_pred EECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE---ecCCCCEEEEEEcCCCC-eEE
Q psy10114 622 RDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY---TEHLAAVKAIAWSPHHH-GLL 697 (819)
Q Consensus 622 WDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~---~~h~~~VtsLafSPdg~-~LL 697 (819)
||+.++. ....+.+|...|.+++|+|++++|++|+.|++|++||.......... .+|...|.+++|+|++. ..+
T Consensus 457 wd~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 457 WDLAAGV--STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EECCCCc--ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 9998865 45778899999999999999999999999999999998655433222 36888999999999873 356
Q ss_pred EEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEE
Q psy10114 698 ASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA 776 (819)
Q Consensus 698 aSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLa 776 (819)
++++ .|++|++||+++++....+. |...|.+++|+|+++.+++ |+.|+.|++||+.+++.+..+.. ...|.+++
T Consensus 535 ~s~s--~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s--g~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~ 609 (694)
T 3dm0_A 535 VSAS--WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS--GGKDGVVLLWDLAEGKKLYSLEA-NSVIHALC 609 (694)
T ss_dssp EEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSBCEEEETTTTEEEECCBC-SSCEEEEE
T ss_pred EEEe--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE--EeCCCeEEEEECCCCceEEEecC-CCcEEEEE
Confidence 6665 89999999999998887774 6788999999999999998 78999999999999998887764 46799999
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 777 MSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 777 fSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
|+|++.++++++ |+.|++||+.+++...
T Consensus 610 ~sp~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 610 FSPNRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EcCCCcEEEEEc-CCCEEEEECCCCCChh
Confidence 999998887765 5669999999887544
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=276.83 Aligned_cols=257 Identities=14% Similarity=0.246 Sum_probs=210.1
Q ss_pred EEcCCCceEEEEec-cCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCC---ce---EEEEEecCCCCeEEEEe--CC
Q psy10114 538 WSACTSQVTRLCDL-SADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSV---AK---QVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 538 Wd~~tg~~~~l~~l-~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~t---gk---~i~tl~gHs~~V~sLaw--ng 607 (819)
|+. +++.. ..+ .+|.+.|++++|+| +|++|++|+.||+|+|||+.+ +. ....+ +|.+.|.+++| ++
T Consensus 48 w~~-~g~~~--~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 48 GNL-RGKLI--ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNF 123 (437)
T ss_dssp GGC-CCCEE--EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTS
T ss_pred ccc-cceEE--eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCC
Confidence 663 33332 355 78899999999999 999999999999999999876 43 22333 59999999999 46
Q ss_pred ceeeeccCCCeEEEEECC---CCCccceEEEec------------ccCCeEEEE--ECCCCCEEEEEECCCeEEEEECCC
Q psy10114 608 DMLSSGSRDRMILQRDVR---TPNSQSERRLVG------------HRQEVCGLK--WSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 608 ~~LaSGS~DGtI~IWDi~---t~~~~~v~~l~g------------H~~~VtsLa--fSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
+.|++|+.||.|++||++ .++. .....+ +...+.++. ++++++++++|+.||.|++||+++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESE--VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTE--EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCEEEEEEeccccCCce--eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 799999999999999995 3321 121111 455667776 668899999999999999999999
Q ss_pred CceeEEEec--CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--cCCCCeEEEEEcc----CCCEEEE
Q psy10114 671 MSPLQTYTE--HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--DTGSQVCNLAWSK----HSSELVS 742 (819)
Q Consensus 671 ~~~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~~s~V~sLafSp----dg~~Las 742 (819)
++++..+.. |.+.|.+++|+|++..+++ |+ .||.|++||+++++.+..+ .+...|.+++|+| ++..+++
T Consensus 202 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 202 LERLQIIENSPRHGAVSSICIDEECCVLIL-GT--TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp CCEEEEEECCGGGCCEEEEEECTTSCEEEE-EE--TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred CeeeEEEccCCCCCceEEEEECCCCCEEEE-Ec--CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence 999999988 8999999999999886554 43 7999999999999998877 4566799996665 5667777
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecC--------------------------CCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGH--------------------------SYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH--------------------------~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
|+.|+.|++||+.+++.+..+.+| ...|++++|+ ++++|++|+.||.|++|
T Consensus 279 --~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~w 355 (437)
T 3gre_A 279 --GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMF 355 (437)
T ss_dssp --ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEE
T ss_pred --EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEE
Confidence 889999999999999998888754 4457888999 78999999999999999
Q ss_pred ECCCCceecc
Q psy10114 797 NVFSKVRSQR 806 (819)
Q Consensus 797 dl~s~~~~~k 806 (819)
|+.+++....
T Consensus 356 d~~~~~~~~~ 365 (437)
T 3gre_A 356 SLNELSSSKA 365 (437)
T ss_dssp ETTCGGGCEE
T ss_pred ECCCcccceE
Confidence 9998875543
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=283.15 Aligned_cols=250 Identities=18% Similarity=0.243 Sum_probs=204.8
Q ss_pred cCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCceE--EEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECC
Q psy10114 552 SADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQ--VHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 552 ~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk~--i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~ 625 (819)
..|...|+|++|+| ++++||+|+.||.|+|||+.+++. ...+.+|.+.|.+++|+ +++|++|+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 34678899999999 567999999999999999987654 44556899999999994 6799999999999999998
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
+...........+...+++++|++++++|++|+.||.|++||++. +.+..+.+|...|.+++|+|++..++++|+ .|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s--~d 272 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATAS--VD 272 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEE--TT
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEec--Cc
Confidence 754322222233445678999999999999999999999999864 567788899999999999999998888876 89
Q ss_pred CeEEEEECCCCceeEEE----cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC------CEEEE
Q psy10114 706 RCIRFWNTLTGQPMQCV----DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY------RVLYL 775 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l----~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~------~VtsL 775 (819)
+.|++||+++++....+ .+...|.+++|+|+|+.+++ |+.|+.|++||+.+++....+.+|.. .+...
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s--~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLT--TDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEE--EESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEE--EcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 99999999987654332 56788999999999999998 78999999999999998888876643 23456
Q ss_pred EEecCCCEEEEEe------------CCCcEEEEECCCCceecc
Q psy10114 776 AMSPDGEAIVTGA------------GDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 776 afSpDG~~LaSGS------------~DGtIrIWdl~s~~~~~k 806 (819)
.|++++..+++++ .++.|++||..+++....
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~ 393 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ 393 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE
Confidence 7777777776664 345799999998876543
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-27 Score=256.62 Aligned_cols=270 Identities=14% Similarity=0.158 Sum_probs=226.8
Q ss_pred eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEE-EEEecCceEEEeecCCceEEEEEecCCCCeEEE
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLV-AVGTHHGYVQVWDVSVAKQVHKLVGHTARVGAL 603 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sL 603 (819)
.+++++.|+.|++||..+++.... +..+ ..+.+++|+|+|+.+ ++++.|+.|++||+.+++.+..+..+. .+.++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~--~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTAT--IPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE--EECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEE--eecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 467777899999999999877654 3344 458999999999977 567789999999999999999888666 89999
Q ss_pred EeC--Ccee-eeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE-EEEECCCeEEEEECCCCceeEEEec
Q psy10114 604 AWN--GDML-SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 604 awn--g~~L-aSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~~~ 679 (819)
+|+ ++.+ ++++.|+.|++||+.+++. ...+. +...+.+++|+|+++.+ ++++.|+.|++||+++++.+..+..
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTV--AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeE--EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec
Confidence 994 5655 5666789999999988653 33444 44578999999999977 6788899999999999998888876
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec-CCCeEEEEECCC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY-SQNQILVWKYPT 758 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs-sDg~I~IWDl~s 758 (819)
+ ..+.+++|+|+++.++++++ .|+.|++||+++++.+..+.+...+.+++|+|+++.++++... .++.|.+||+.+
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred C-CCcceEEECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 5 55699999999998877765 7899999999999999888888889999999999999985321 689999999999
Q ss_pred CcEEEEEecCCCCEEEEEEecCCCEE-EEEeCCCcEEEEECCCCceec
Q psy10114 759 LTQVAKLTGHSYRVLYLAMSPDGEAI-VTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLafSpDG~~L-aSGS~DGtIrIWdl~s~~~~~ 805 (819)
++.+..+..|. .+.+++|+|+|+++ ++++.|+.|++||+.+++...
T Consensus 234 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 234 NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 99998888765 47899999999987 677889999999999877544
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-27 Score=261.72 Aligned_cols=276 Identities=15% Similarity=0.085 Sum_probs=231.5
Q ss_pred EEEecC-Ce-EEEEECCCeEEEEEcCCCceEEEE---eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 518 LVDWSS-QN-VLSVGLGSCVYLWSACTSQVTRLC---DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 518 ~ldwS~-~~-LLa~g~Dg~V~LWd~~tg~~~~l~---~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
++.|++ +. +++++.++.|++||..+++..... .+.+|.+.|.+++|+++|+++++++.||.|++||+++++.+..
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE
Confidence 345553 33 455556778999999999876533 2347888999999999999999999999999999999999999
Q ss_pred EecCCCCeEEEEeC--Ccee-eeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE--------CCC
Q psy10114 593 LVGHTARVGALAWN--GDML-SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG--------NDN 661 (819)
Q Consensus 593 l~gHs~~V~sLawn--g~~L-aSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS--------~DG 661 (819)
+..|...+.+++|+ ++.+ ++++.|+.|++||+++++. ...+.. ...+.+++|+|+++.+++++ .||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~--~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE--IRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE--EEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE--EEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 99999999999994 5555 5666899999999987653 334443 45699999999999999988 588
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~La 741 (819)
.|++||+++++.+..+ .+...+.+++|+|+++.++++++ .|+.|++||+.+++.+..+.+...+.+++|+|+|+.++
T Consensus 284 ~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 284 RLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDM--CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEET--TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE
T ss_pred eEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEec--CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEE
Confidence 9999999998877665 45668899999999998888875 89999999999999999888888999999999999988
Q ss_pred EEEecC-------------CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC-CCcEEEEECCC
Q psy10114 742 STHGYS-------------QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-DETLRFWNVFS 800 (819)
Q Consensus 742 stsGss-------------Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~-DGtIrIWdl~s 800 (819)
++.... ||.|.+||..+++.+..+.. ...+.+++|+|||++|++++. |+.|++|++.+
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 854322 57999999999999988876 457999999999999998875 99999999863
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=292.64 Aligned_cols=234 Identities=13% Similarity=0.153 Sum_probs=187.9
Q ss_pred EcCCCCEEEEEecCceEEEeecCCceE----EEEEecCCCCeEEEEeCC--------ceeeeccCCCeEEEEECCCCCcc
Q psy10114 563 WNERGNLVAVGTHHGYVQVWDVSVAKQ----VHKLVGHTARVGALAWNG--------DMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 563 fSpdG~~LAsGs~DGtI~IWDl~tgk~----i~tl~gHs~~V~sLawng--------~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
.+|+++.+++|+.||+|+|||+.+++. ..++.+|.+.|.+++|++ ++|++|+.||+|++||+..+...
T Consensus 169 ~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp -------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred cchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 356677778888999999999987754 245677889999999953 48999999999999999875421
Q ss_pred ---------ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEE--EEcCCCCeEEE
Q psy10114 631 ---------SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAI--AWSPHHHGLLA 698 (819)
Q Consensus 631 ---------~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsL--afSPdg~~LLa 698 (819)
....+.+|...|.+++|+++ ..|++|+.||+|++||++++ .+...+.+|...|.++ +|+|++..+++
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 23467889999999999986 48999999999999999976 4566788999999999 56787745777
Q ss_pred EEccCCCCeEEEEECCCCceeEEEc-C--CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEE
Q psy10114 699 SGGGTADRCIRFWNTLTGQPMQCVD-T--GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYL 775 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~tg~~v~~l~-~--~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsL 775 (819)
+|+ .|++|++||++++++...+. + ...+.+++|+|+++.+++ ++.|+.|++||++++..+..+.+|.+.|+++
T Consensus 328 S~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s--~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sv 403 (524)
T 2j04_B 328 TVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIY--SDGASSLRAVPSRAAFAVHPLVSRETTITAI 403 (524)
T ss_dssp EEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEE--ECSSSEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred Eec--cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEE--eCCCCcEEEEECcccccceeeecCCCceEEE
Confidence 776 89999999999887655442 2 235789999999999888 7789999999999999888899999999999
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 776 AMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 776 afSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+|||+|++|++|+.||+|++||+..+
T Consensus 404 a~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 404 GVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp ECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EeCCCCCeEEEEECCCEEEEEechHh
Confidence 99999999999999999999998654
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=299.03 Aligned_cols=281 Identities=11% Similarity=0.108 Sum_probs=208.6
Q ss_pred eEEEEEecCC---eEEEEECCCeEEEEEcCCCceEEEEecc----------------CCCCCeEEEEEcCCCCEEEEEec
Q psy10114 515 YLNLVDWSSQ---NVLSVGLGSCVYLWSACTSQVTRLCDLS----------------ADGNSVTSVAWNERGNLVAVGTH 575 (819)
Q Consensus 515 yv~~ldwS~~---~LLa~g~Dg~V~LWd~~tg~~~~l~~l~----------------~h~~~VtsLafSpdG~~LAsGs~ 575 (819)
.+.+++|+++ .+++++.|+.| +||+.+++..+..... .|...|++++|+|+|++||+|+.
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 4677888863 68888899999 9999998765543321 23578999999999999999999
Q ss_pred CceEEEeecCCceEEEE--E---ec-------------CCCCeEEEEe----CC---ceeeeccCC--------------
Q psy10114 576 HGYVQVWDVSVAKQVHK--L---VG-------------HTARVGALAW----NG---DMLSSGSRD-------------- 616 (819)
Q Consensus 576 DGtI~IWDl~tgk~i~t--l---~g-------------Hs~~V~sLaw----ng---~~LaSGS~D-------------- 616 (819)
||.|++||+.+++.+.. + .+ |...|.+++| ++ ..+++|+.|
T Consensus 232 Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~ 311 (902)
T 2oaj_A 232 DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLG 311 (902)
T ss_dssp TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecC
Confidence 99999999999887654 2 12 3457888888 22 345555443
Q ss_pred --------------------------------------------------------------CeEEEEECCCCCccce--
Q psy10114 617 --------------------------------------------------------------RMILQRDVRTPNSQSE-- 632 (819)
Q Consensus 617 --------------------------------------------------------------GtI~IWDi~t~~~~~v-- 632 (819)
|.|++||+.++.....
T Consensus 312 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~ 391 (902)
T 2oaj_A 312 YTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKAS 391 (902)
T ss_dssp ECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGG
T ss_pred CCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccc
Confidence 3344444322210000
Q ss_pred ---E----------------------------------EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee-
Q psy10114 633 ---R----------------------------------RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL- 674 (819)
Q Consensus 633 ---~----------------------------------~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i- 674 (819)
. .+.+|...+..++|+|+++.||+|+.|++|++||+.++...
T Consensus 392 ~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~ 471 (902)
T 2oaj_A 392 LFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD 471 (902)
T ss_dssp GSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT
T ss_pred cCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccC
Confidence 0 01223333444556789999999999999999999887531
Q ss_pred ---EEE--e-----cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc---------------------------
Q psy10114 675 ---QTY--T-----EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--------------------------- 717 (819)
Q Consensus 675 ---~t~--~-----~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--------------------------- 717 (819)
... . +|...|.+++|+|+++.+ ++|+ .|++|++||+.+++
T Consensus 472 ~~~~~~~l~~~~~~~h~~~V~svafspdg~~L-Asgs--~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (902)
T 2oaj_A 472 NASFEVNLSRTLNKAKELAVDKISFAAETLEL-AVSI--ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNG 548 (902)
T ss_dssp TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEE-EEEE--TTSCEEEEEEEECCC---------------CCSCCGGGSSC
T ss_pred CceEEeechhhcCCCCCCceeEEEecCCCCeE-EEEe--cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcc
Confidence 111 1 788999999999999955 4554 89999999998763
Q ss_pred ------------------eeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEE-----Ee-cCCCCE
Q psy10114 718 ------------------PMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAK-----LT-GHSYRV 772 (819)
Q Consensus 718 ------------------~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~s-----l~-gH~~~V 772 (819)
++..+. +.+.|++++||||| ++++ |+.|+.|++||+.+...+.. +. +|.+.|
T Consensus 549 ~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAs--gs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V 625 (902)
T 2oaj_A 549 VLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGI--AYAAGSLMLIDRRGPAIIYMENIREISGAQSACV 625 (902)
T ss_dssp SEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEE--EETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCE
T ss_pred ccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEE--EeCCCcEEEEECCCCeEEEEeehhHhccccccce
Confidence 244443 77889999999999 8888 88999999999988776542 22 899999
Q ss_pred EEEEEe-----cCC---CEEEEEeCCCcEEEEEC---CCCc
Q psy10114 773 LYLAMS-----PDG---EAIVTGAGDETLRFWNV---FSKV 802 (819)
Q Consensus 773 tsLafS-----pDG---~~LaSGS~DGtIrIWdl---~s~~ 802 (819)
++++|+ ||| ++|++|+.||+|++||+ .+++
T Consensus 626 ~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 626 TCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp EEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred EEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 999999 885 89999999999999999 5544
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-27 Score=246.30 Aligned_cols=247 Identities=16% Similarity=0.275 Sum_probs=206.5
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCc--eEEEEeccCCCCCeEEEEEcC--CCCEEEEEecCceEEEeecCCc-
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQ--VTRLCDLSADGNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVSVA- 587 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~--~~~l~~l~~h~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~tg- 587 (819)
.+.+++|+ ++.+++++.|+.|++||..++. ......+.+|.+.|++++|+| ++++|++|+.||.|++||++++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 47777776 4579999999999999998653 234456778999999999999 6999999999999999999887
Q ss_pred --------eEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEE-----------EecccCCeEE
Q psy10114 588 --------KQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERR-----------LVGHRQEVCG 644 (819)
Q Consensus 588 --------k~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~-----------l~gH~~~Vts 644 (819)
+.+..+.+|...|.+++|+ ++.+++|+.||.|++||+++++...... ...|...+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred ccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeE
Confidence 6688889999999999994 6789999999999999998876432211 1257889999
Q ss_pred EEECCC---CCEEEEEECCCeEEEEECCCCce--eEEEecCCCCEEEEEEcCCCC---eEEEEEccCCCCeEEEEECCCC
Q psy10114 645 LKWSPD---NQYLASGGNDNRLYVWNLHSMSP--LQTYTEHLAAVKAIAWSPHHH---GLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 645 LafSpd---g~~LaSGS~DGtI~IWDl~t~~~--i~t~~~h~~~VtsLafSPdg~---~LLaSGgGs~DgtIrIWDl~tg 716 (819)
++|+|+ ++.+++++.|+.+.+|+...++. +..+.+|...|.+++|+|++. .++++|+ .|+.|++||++++
T Consensus 173 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~--~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC--KDGRIRIFKITEK 250 (351)
T ss_dssp EEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE--TTSCEEEEEEEEC
T ss_pred EEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc--CCCeEEEEeCCCC
Confidence 999997 99999999999998888887765 677788999999999999983 4666665 8999999999875
Q ss_pred ----------------------------------------------ceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 717 ----------------------------------------------QPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 717 ----------------------------------------------~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg 749 (819)
+.+..+ .+...|.+++|+|+++.+++ |+.||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~~~dg 328 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS--AGDDG 328 (351)
T ss_dssp C---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE--EETTS
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE--ecCCC
Confidence 333444 35678999999999999999 77999
Q ss_pred eEEEEECCCCcEEEEE
Q psy10114 750 QILVWKYPTLTQVAKL 765 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl 765 (819)
.|++||+.+++....+
T Consensus 329 ~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 329 KVRLWKATYSNEFKCM 344 (351)
T ss_dssp CEEEEEECTTSCEEEE
T ss_pred cEEEEecCcCcchhhe
Confidence 9999999987665544
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-28 Score=267.59 Aligned_cols=235 Identities=24% Similarity=0.435 Sum_probs=209.8
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCcc
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
..+|...|.++++ +|+++++|+.||.|++||+.+++.+..+.+|.+.|.+++|+++.+++|+.||.|++||+++++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~-- 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGE-- 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCC--
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCc--
Confidence 3456778998887 789999999999999999999999999999999999999999999999999999999999876
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee---EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL---QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i---~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
....+.+|...|.+++|+ ++.+++|+.||.|++||+++++.. ..+.+|...|.+++| +++.+ ++|+ .|+.
T Consensus 205 ~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~s~~--~dg~ 277 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYI-VSAS--GDRT 277 (435)
T ss_dssp EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEE-EEEE--TTSE
T ss_pred EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEE-EEEe--CCCe
Confidence 457788999999999997 469999999999999999988765 677889999999999 55544 4544 7999
Q ss_pred EEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEE
Q psy10114 708 IRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaS 786 (819)
|++||+++++.+..+. +...+.++++ +++.+++ |+.||.|++||+++++.+..+.+|...|.+++| ++++|++
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEE--EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEE
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEE--EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEE
Confidence 9999999999988875 5678999988 4678888 789999999999999999999999999999999 7889999
Q ss_pred EeCCCcEEEEECCCCc
Q psy10114 787 GAGDETLRFWNVFSKV 802 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~ 802 (819)
|+.||.|++||+.+++
T Consensus 352 g~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 352 GAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EETTSCEEEEEHHHHT
T ss_pred EeCCCcEEEEECCCCC
Confidence 9999999999997654
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-29 Score=296.81 Aligned_cols=248 Identities=19% Similarity=0.324 Sum_probs=212.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC--CceEEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEE
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS--VAKQVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRD 623 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~--tgk~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWD 623 (819)
.+.+|.+.|++++|+|+|++|++|+.||.|+|||+. +++.+..+.+|.+.|.+++|+ ++.+++|+.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 467899999999999999999999999999999998 567888999999999999994 77999999999999999
Q ss_pred CCCCCccceEEEecccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCC--ceeEEEecCCCCEEEEEEcCC-------
Q psy10114 624 VRTPNSQSERRLVGHRQEVCGLKWSPD--NQYLASGGNDNRLYVWNLHSM--SPLQTYTEHLAAVKAIAWSPH------- 692 (819)
Q Consensus 624 i~t~~~~~v~~l~gH~~~VtsLafSpd--g~~LaSGS~DGtI~IWDl~t~--~~i~t~~~h~~~VtsLafSPd------- 692 (819)
+++++......+.+|...|.+++|+|+ ++.+++|+.||.|++||++++ .....+.+|...|.+++|+|.
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 998765566788899999999999999 999999999999999999887 345567789999999999994
Q ss_pred ------CCeEEEEEccCCCCeEEEEECCCCc----eeEEE-cCCCCeEEEEEccC---CCEEEEEEecCCCeEEEEECCC
Q psy10114 693 ------HHGLLASGGGTADRCIRFWNTLTGQ----PMQCV-DTGSQVCNLAWSKH---SSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 693 ------g~~LLaSGgGs~DgtIrIWDl~tg~----~v~~l-~~~s~V~sLafSpd---g~~LastsGssDg~I~IWDl~s 758 (819)
+..+ ++|+ .||.|++||++++. ....+ .+...|.+++|+|+ ++.+++ |+.||.|++||+.+
T Consensus 164 ~~~~~d~~~l-~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s--~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 164 HNGTKESRKF-VTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDRTCIIWTQDN 238 (753)
T ss_dssp ---CGGGCCE-EEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EESSSCEEEEEESS
T ss_pred cccCCCCCEE-EEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE--EecCCEEEEecCCC
Confidence 6644 4444 79999999998874 33333 46788999999999 888888 77899999999987
Q ss_pred Cc-----EEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 759 LT-----QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 759 ~k-----~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
++ ......+|.+.|++++|+|+|+++++|+.||.|++|++..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 64 333334688899999999999999999999999999998543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-27 Score=248.69 Aligned_cols=248 Identities=16% Similarity=0.247 Sum_probs=207.7
Q ss_pred EEeccCCCCCeEEEEEcCC---CCEEEEEecCceEEEeecCC-ceEE-EEEecCCCCeEEEEe--CCceeeeccCCCeEE
Q psy10114 548 LCDLSADGNSVTSVAWNER---GNLVAVGTHHGYVQVWDVSV-AKQV-HKLVGHTARVGALAW--NGDMLSSGSRDRMIL 620 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSpd---G~~LAsGs~DGtI~IWDl~t-gk~i-~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~ 620 (819)
+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+++ ++.+ ..+.+|...|.+++| ++++|++|+.||.|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 3467889999999999999 69999999999999999987 5554 788899999999999 577999999999999
Q ss_pred EEECCCCCccceEEEecccCCeEEEEE--CCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKW--SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLaf--Spdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
+||+++++. ....+|...|.+++| +++++++++++.||.|++||+++++++..+..+. .+.++.+.++ .+++
T Consensus 112 iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~ 185 (368)
T 3mmy_A 112 MWDLSSNQA---IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYP--MAVV 185 (368)
T ss_dssp EEETTTTEE---EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETT--EEEE
T ss_pred EEEcCCCCc---eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCC--eeEE
Confidence 999998653 446789999999999 9999999999999999999999999999988664 6667776654 4444
Q ss_pred EEccCCCCeEEEEECCCCceeEEE---cCCCCeEEEEEccCCCE----EEEEEecCCCeEEEEECCCC---cEEEEEecC
Q psy10114 699 SGGGTADRCIRFWNTLTGQPMQCV---DTGSQVCNLAWSKHSSE----LVSTHGYSQNQILVWKYPTL---TQVAKLTGH 768 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~tg~~v~~l---~~~s~V~sLafSpdg~~----LastsGssDg~I~IWDl~s~---k~l~sl~gH 768 (819)
++ .|+.+++||++........ .....+..+++.++... +++ ++.|+.|++||+... +.+..+.+|
T Consensus 186 ~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dg~i~i~~~~~~~~~~~~~~~~~~ 260 (368)
T 3mmy_A 186 AT---AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL--GSIEGRVAIHYINPPNPAKDNFTFKCH 260 (368)
T ss_dssp EE---GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE--EETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred Ee---CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE--ecCCCcEEEEecCCCCccccceeeeee
Confidence 43 6999999999887554433 23455677777666654 666 789999999999887 567788888
Q ss_pred CC------------CEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 769 SY------------RVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 769 ~~------------~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.. .|.+++|+|+|++|++|+.||.|++||+.+++....
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE
Confidence 76 799999999999999999999999999998876544
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-27 Score=256.28 Aligned_cols=238 Identities=23% Similarity=0.409 Sum_probs=206.2
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec-CCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG-HTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g-Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
.+.+++|++ ..+++++.||.|++||+.+++....+.. |...|.+++| ++++|++|+.||.|++||+.+++ ...
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~ 170 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--KLR 170 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEE
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--EEE
Confidence 456677775 4577888999999999999998888876 8999999999 57799999999999999998865 457
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC-CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH-SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~-t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD 712 (819)
.+.+|...|.+++| +++.+++|+.||.|++||++ .+..+..+.+|.+.|.+++|+|++..+++ |+ .|+.|++||
T Consensus 171 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~--~d~~v~iwd 245 (401)
T 4aez_A 171 TMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS-GG--NDNVVQIWD 245 (401)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE-EE--TTSCEEEEE
T ss_pred EecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE-Ee--CCCeEEEcc
Confidence 78899999999999 56799999999999999998 56678889999999999999999886555 43 799999999
Q ss_pred CCCCceeEEE-cCCCCeEEEEEccCCCEEEEEE-ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe--
Q psy10114 713 TLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTH-GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-- 788 (819)
Q Consensus 713 l~tg~~v~~l-~~~s~V~sLafSpdg~~Lasts-GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS-- 788 (819)
+++++.+..+ .+...|.+++|+|++..+++++ |..|+.|++||+.+++.+..+. +...|.+++|+|+|+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 246 ARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp TTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECT
T ss_pred CCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeec
Confidence 9999988877 4678899999999887766653 3479999999999999998886 667899999999999999954
Q ss_pred CCCcEEEEECCCCcee
Q psy10114 789 GDETLRFWNVFSKVRS 804 (819)
Q Consensus 789 ~DGtIrIWdl~s~~~~ 804 (819)
.||.|++||+.+++..
T Consensus 325 ~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLT 340 (401)
T ss_dssp TTCEEEEEEEETTEEE
T ss_pred CCCcEEEEecCCccce
Confidence 8999999999886543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-28 Score=258.24 Aligned_cols=260 Identities=9% Similarity=0.006 Sum_probs=208.2
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC---------CceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS---------VAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~---------tgk~i~t 592 (819)
++..+++++.||.|++||..+++...... ...|.+++|+|+ +++|+.||+|++|+.. +++.+..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 45679999999999999999988765443 356788889988 9999999999999665 5555555
Q ss_pred Ee-cCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEEE-ecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 593 LV-GHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERRL-VGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 593 l~-gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l-~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
.. +|.+.|.+++|+ ++++++|+.||.|++||+++++. .... ..|...|.+++|+|+++++++|+.||.|++|
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 55 788899999994 46899999999999999998764 2333 3456689999999999999999999999999
Q ss_pred ECCCCcee-EEEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC----CCCe--EEEEEccCCC
Q psy10114 667 NLHSMSPL-QTYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT----GSQV--CNLAWSKHSS 738 (819)
Q Consensus 667 Dl~t~~~i-~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~----~s~V--~sLafSpdg~ 738 (819)
|+++++.+ ..+.. |.+.|.+++|+|++..+++++ |+.|++||+++++.+..+.. ...+ .+++|+|+|+
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~----~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC----DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE----SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe----CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 99999987 78888 999999999999998665543 44999999999876544431 1223 4699999999
Q ss_pred EEEEEEecC-CCeEEEEECCCCcEEEEEecCCCCEEEEEEec---CCCEEEEEeCCCcEEEEECCC
Q psy10114 739 ELVSTHGYS-QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP---DGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 739 ~LastsGss-Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp---DG~~LaSGS~DGtIrIWdl~s 800 (819)
++++ ++. |+.+++|++.+....... .++..++|++ +++.+++++.||.++++-...
T Consensus 274 ~l~~--~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 274 NMIA--YSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EEEE--EETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred EEEE--ecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 9998 445 899999999766544333 5677888988 889999999999999886443
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-27 Score=257.24 Aligned_cols=240 Identities=22% Similarity=0.359 Sum_probs=202.9
Q ss_pred eEEEEEcCCCCEE-EEEecCceEEEeecCCce----EEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCc
Q psy10114 558 VTSVAWNERGNLV-AVGTHHGYVQVWDVSVAK----QVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNS 629 (819)
Q Consensus 558 VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk----~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~ 629 (819)
...++++++...+ ++|+.||.|+|||+.+.. .+..+.+|.+.|.+++|+ +++|++|+.||.|++||+.++..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 4457888877544 457889999999996643 345677999999999994 56999999999999999988642
Q ss_pred -----cceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCceeEEE--ecCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 630 -----QSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHSMSPLQTY--TEHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 630 -----~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t~~~i~t~--~~h~~~VtsLafSPdg~~LLaSGg 701 (819)
.....+.+|...|.+++|+|++ +.|++|+.||.|++||+++++.+..+ ..|...|.+++|+|++..+++++
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 195 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC- 195 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE-
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe-
Confidence 3467888999999999999998 69999999999999999999999999 78999999999999998766644
Q ss_pred cCCCCeEEEEECCCCceeEEE--cCCC-CeEEEEEccCCCEEEEEEe---cCCCeEEEEECCCCcE-EEEEe-cCCCCEE
Q psy10114 702 GTADRCIRFWNTLTGQPMQCV--DTGS-QVCNLAWSKHSSELVSTHG---YSQNQILVWKYPTLTQ-VAKLT-GHSYRVL 773 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v~~l--~~~s-~V~sLafSpdg~~LastsG---ssDg~I~IWDl~s~k~-l~sl~-gH~~~Vt 773 (819)
.|+.|++||+++++.+..+ .+.. .+.+++|+|+++.+++ | ..|+.|++||+.+++. +.... .|...+.
T Consensus 196 --~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 196 --RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT--GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp --TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE--EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred --cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE--eccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 7999999999999998887 3333 3899999999998887 6 6899999999988664 33333 5778899
Q ss_pred EEEEecCCCEEEE-EeCCCcEEEEECCCCc
Q psy10114 774 YLAMSPDGEAIVT-GAGDETLRFWNVFSKV 802 (819)
Q Consensus 774 sLafSpDG~~LaS-GS~DGtIrIWdl~s~~ 802 (819)
+++|+|+|++|++ |+.||.|++||+.+++
T Consensus 272 ~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 9999999999975 5579999999999876
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=254.76 Aligned_cols=265 Identities=16% Similarity=0.242 Sum_probs=213.3
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCceEEEeecCCceEEEEEe-------------cCCC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQVHKLV-------------GHTA 598 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk~i~tl~-------------gHs~ 598 (819)
+.+++|+...++... .+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++....+. +|..
T Consensus 23 ~~~~v~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 23 STRRVLGLELNKDRD--VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHTEEECTTEE--ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred CcceeeccccCccee--eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 456677776666544 4567999999999999 99999999999999999998876544432 5999
Q ss_pred CeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC---CCEEEEEECCCeEEEEECCCCc
Q psy10114 599 RVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD---NQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 599 ~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd---g~~LaSGS~DGtI~IWDl~t~~ 672 (819)
.|.+++|+ ++.+++|+.||.|++||+++++.. .. ..+...+.++.+++. +..+++|+.||.|++||+++++
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA--DV-FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE--EE-EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc--ee-ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 99999994 458999999999999999986532 33 347788999999984 4599999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc-eeEEE----------------cCCCCeEEEEEcc
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ-PMQCV----------------DTGSQVCNLAWSK 735 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~-~v~~l----------------~~~s~V~sLafSp 735 (819)
.+..+..|...|.+++|+|++..++++|+ .|+.|++||++++. .+..+ .+...|.+++|+|
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 99999999999999999999998777776 89999999998875 33333 3567899999999
Q ss_pred CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC-----CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 736 HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS-----YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~-----~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+++.+++ ++.|+.|++||+.+++......++. ..+........+..+++++.|+.|++||+.+++....
T Consensus 256 ~~~~l~~--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 329 (408)
T 4a11_B 256 DGLHLLT--VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITM 329 (408)
T ss_dssp TSSEEEE--EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEE
T ss_pred CCCEEEE--ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceee
Confidence 9999998 7789999999999887755443321 1222222233455677778899999999998876543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-26 Score=247.73 Aligned_cols=270 Identities=14% Similarity=0.125 Sum_probs=207.3
Q ss_pred eEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEE-EEEecCceEEEeecCCceEEEE
Q psy10114 515 YLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLV-AVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 515 yv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk~i~t 592 (819)
.+.+++|+++ .+++++.++.+++||..+++....... ..+..+++.++++.+ ++|+.|++|++||..+++.+..
T Consensus 21 ~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM----RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC----SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec----CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 3556677643 345555666789999987765433222 247888999988887 4677889999999999999998
Q ss_pred EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCC-CccceEEEecccCCeEEEEECCCCCEEEE--EECCCeEEEEECC
Q psy10114 593 LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTP-NSQSERRLVGHRQEVCGLKWSPDNQYLAS--GGNDNRLYVWNLH 669 (819)
Q Consensus 593 l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~-~~~~v~~l~gH~~~VtsLafSpdg~~LaS--GS~DGtI~IWDl~ 669 (819)
+. +...|.+++++++.++++. |+.|++||+.+. +. ...+.. ....+++++ +.+++ |+.||.|++||++
T Consensus 97 ~~-~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~--~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 97 IK-VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKR--ITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp EE-CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCB--SSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECC
T ss_pred EE-CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCcee--eEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECC
Confidence 87 6679999999988777664 789999999986 32 223332 333455666 56666 5889999999998
Q ss_pred CCc---------------e-eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe-EEEEECCCCceeEEEc---CCCCeE
Q psy10114 670 SMS---------------P-LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC-IRFWNTLTGQPMQCVD---TGSQVC 729 (819)
Q Consensus 670 t~~---------------~-i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt-IrIWDl~tg~~v~~l~---~~s~V~ 729 (819)
+++ + +..+.+|.+.|.+++|+|++..++ +|+ .|++ |++||+++++.+..+. +...|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~-s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVA-TCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVV 244 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEE-EEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEE-EEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence 865 2 788899999999999999998554 544 8998 9999999999999886 788999
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEE--EEEe---------------------cCCCCEEEEEEecCCCEEEE
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV--AKLT---------------------GHSYRVLYLAMSPDGEAIVT 786 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l--~sl~---------------------gH~~~VtsLafSpDG~~LaS 786 (819)
+++|+|+++.+++ ++.|+.|++||+...... ..+. .+......++|++||+.|++
T Consensus 245 ~~~~s~~~~~l~s--~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~ 322 (355)
T 3vu4_A 245 DMKWSTDGSKLAV--VSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV 322 (355)
T ss_dssp EEEECTTSCEEEE--EETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE
T ss_pred EEEECCCCCEEEE--EECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEE
Confidence 9999999999999 778999999999754311 1110 11223467899999999999
Q ss_pred EeCCCcEEEEECCCCc
Q psy10114 787 GAGDETLRFWNVFSKV 802 (819)
Q Consensus 787 GS~DGtIrIWdl~s~~ 802 (819)
++.||.+++|++..++
T Consensus 323 ~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 323 WPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTTTEEEEEEEEEET
T ss_pred EeCCCeEEEEEEEcCC
Confidence 9999999999987654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-26 Score=249.56 Aligned_cols=249 Identities=13% Similarity=0.091 Sum_probs=185.7
Q ss_pred EEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCcee-eeccC
Q psy10114 537 LWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML-SSGSR 615 (819)
Q Consensus 537 LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~L-aSGS~ 615 (819)
+|+..+.+. +.....|.+.|++++|+|||++||+|+.+| ++|||.++++.......+...+.++.++++.+ ++|+.
T Consensus 3 i~s~~~~~~--~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNP--IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ------------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCC--ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECC
Confidence 344444433 234577899999999999999999999876 78999998887766554433333344456655 67888
Q ss_pred CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-ceeEEEecCCCCEEEEEEcCCCC
Q psy10114 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM-SPLQTYTEHLAAVKAIAWSPHHH 694 (819)
Q Consensus 616 DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~-~~i~t~~~h~~~VtsLafSPdg~ 694 (819)
|+.|++||..+++. +..+. +...|.+++++++. ++++ .|+.|++||+.++ +.+..+.. ....+++++ .
T Consensus 80 d~~v~iWd~~~~~~--~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~ 148 (355)
T 3vu4_A 80 KEVVHIWDDVKKQD--VSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--G 148 (355)
T ss_dssp TTEEEEEETTTTEE--EEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--T
T ss_pred ccEEEEEECCCCcE--EEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--c
Confidence 99999999988663 34444 67799999998764 4444 4789999999988 66666654 445566777 4
Q ss_pred eEEEEEccCCCCeEEEEECCCCc---------------e-eEEE-cCCCCeEEEEEccCCCEEEEEEecCCCe-EEEEEC
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQ---------------P-MQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQ-ILVWKY 756 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~---------------~-v~~l-~~~s~V~sLafSpdg~~LastsGssDg~-I~IWDl 756 (819)
.++++ +|+.||.|++||+.+++ + +..+ .|...|.+++|+|+|+.+++ |+.|+. |++||+
T Consensus 149 ~la~~-sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s--~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 149 LLVYS-NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT--CSQDGTIIRVFKT 225 (355)
T ss_dssp EEEEE-ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE--EETTCSEEEEEET
T ss_pred EEEEe-CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE--EeCCCCEEEEEEC
Confidence 44443 23589999999999876 1 3444 57788999999999999999 789998 999999
Q ss_pred CCCcEEEEEe-c-CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 757 PTLTQVAKLT-G-HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 757 ~s~k~l~sl~-g-H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.+++.+.++. + |.+.|.+++|+|||++|++|+.|++|++||+..+.
T Consensus 226 ~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 226 EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999998 6 99999999999999999999999999999998754
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-26 Score=252.98 Aligned_cols=234 Identities=11% Similarity=0.123 Sum_probs=198.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCce---EEEEEec-------------------------------------
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK---QVHKLVG------------------------------------- 595 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk---~i~tl~g------------------------------------- 595 (819)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899999999966655 57899999999988 6655553
Q ss_pred -----------------CCCCeEEEEe--CCcee-eeccCCCeEEEEECC--CCCccceEEEe--cccCCeEEEEECCCC
Q psy10114 596 -----------------HTARVGALAW--NGDML-SSGSRDRMILQRDVR--TPNSQSERRLV--GHRQEVCGLKWSPDN 651 (819)
Q Consensus 596 -----------------Hs~~V~sLaw--ng~~L-aSGS~DGtI~IWDi~--t~~~~~v~~l~--gH~~~VtsLafSpdg 651 (819)
|.+.|.+++| +++.| ++|+.||.|++||+. +++. ...+. .|...|++++|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV--LKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC--EEEEEEEECSSCEEEEEECTTS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce--eeeeecccCCCCceEEEEcCCC
Confidence 3337999999 46675 899999999999998 5543 34444 677899999999999
Q ss_pred CEEEEEECCCeEEEEECCCCceeE----EEecCCCCEEEEEEcCC---CCeEEEEEccCCCCeEEEEECCCCceeEEE--
Q psy10114 652 QYLASGGNDNRLYVWNLHSMSPLQ----TYTEHLAAVKAIAWSPH---HHGLLASGGGTADRCIRFWNTLTGQPMQCV-- 722 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t~~~i~----t~~~h~~~VtsLafSPd---g~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-- 722 (819)
++|++|+.||.|++||+.+++... .+.+|...|.+++|+|+ ++. +++|+ .|+.|++||+++++.+..+
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~-l~s~~--~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQF-IITSD--RDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEE-EEEEE--TTSCEEEEEESCTTCEEEECC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcE-EEEEc--CCCcEEEEECCCCceeeeeec
Confidence 999999999999999998877544 77889999999999999 664 45554 7999999999999888774
Q ss_pred cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec-------------------------CCCCEEEEEE
Q psy10114 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG-------------------------HSYRVLYLAM 777 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g-------------------------H~~~VtsLaf 777 (819)
.+...|.+++|+ +++.+++ |+.|+.|++||+.+++.+..+.. ....|.+++|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s--~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLS--AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEE--EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred CCCCceEEEEEC-CCCEEEE--EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 467889999999 9999998 77999999999999999888863 2457999999
Q ss_pred ecCCCEEEEEe-CCCcEEEEEC
Q psy10114 778 SPDGEAIVTGA-GDETLRFWNV 798 (819)
Q Consensus 778 SpDG~~LaSGS-~DGtIrIWdl 798 (819)
+|++++|++++ .|+.|++|++
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEEe
Confidence 99999999999 8999999999
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=251.80 Aligned_cols=237 Identities=11% Similarity=0.072 Sum_probs=189.8
Q ss_pred eEEEEEecCCeEEEEE-----------CCCeEEEEEcCCCce--EEEEe-----ccCCCCCeEEEEEcCCCCEEEEEe--
Q psy10114 515 YLNLVDWSSQNVLSVG-----------LGSCVYLWSACTSQV--TRLCD-----LSADGNSVTSVAWNERGNLVAVGT-- 574 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g-----------~Dg~V~LWd~~tg~~--~~l~~-----l~~h~~~VtsLafSpdG~~LAsGs-- 574 (819)
.+.+++++++.+++++ .|+.+++|+..+.+. ..... ...+...+.+++|||||+++|+++
T Consensus 75 ~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~ 154 (365)
T 4h5i_A 75 SPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSK 154 (365)
T ss_dssp CCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESC
T ss_pred ceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECC
Confidence 4567788888877764 356799998765432 11111 123445689999999999987654
Q ss_pred cCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 575 HHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 575 ~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
.|++|+|||+++++++..+. |...|.+++| +|.++++++.| .+.+|+..+++........+|...|.+++|+|+++
T Consensus 155 ~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 155 VPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp SSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred CCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 68999999999999998886 7788999999 57788888855 45666666655444455677889999999999999
Q ss_pred EEEEEECCC----eEEEEECCCCce----eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--
Q psy10114 653 YLASGGNDN----RLYVWNLHSMSP----LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-- 722 (819)
Q Consensus 653 ~LaSGS~DG----tI~IWDl~t~~~----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-- 722 (819)
.+++++.|+ .+++||...... ...+.+|...|.+++|+|+|+.+ ++|+ .|++|++||+++++++..+
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l-asgs--~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELA-VLAS--NDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEE-EEEE--TTSCEEEEETTTTEEEEEETT
T ss_pred EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCce-EEEc--CCCEEEEEECCCCcEEEEecC
Confidence 999999887 688899876653 35677899999999999999855 5554 8999999999999999886
Q ss_pred cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
.|...|++++|+|||++|++ |+.|++|+|||++.
T Consensus 310 gH~~~V~~v~fSpdg~~laS--~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVAS--VSAANTIHIIKLPL 343 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEE--EETTSEEEEEECCT
T ss_pred cccCCEEEEEECCCCCEEEE--EeCCCeEEEEEcCC
Confidence 36789999999999999999 88999999999974
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-25 Score=244.59 Aligned_cols=258 Identities=23% Similarity=0.417 Sum_probs=208.8
Q ss_pred CcceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-ce
Q psy10114 512 DDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-AK 588 (819)
Q Consensus 512 dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-gk 588 (819)
+..+|.+++|++ +.+++|+.|+.|++||+.+++... .+.+|...+.+++++ +..+++|+.|+.+++||... ..
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~--~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR--NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE--EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce
Confidence 345788899884 579999999999999999987654 677899999998885 67999999999999999876 45
Q ss_pred EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc--cceEEEecccCCeEEEEECCCCC-EEEEE--ECCC
Q psy10114 589 QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS--QSERRLVGHRQEVCGLKWSPDNQ-YLASG--GNDN 661 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~--~~v~~l~gH~~~VtsLafSpdg~-~LaSG--S~DG 661 (819)
.+..+.+|...+..+.| ++..+++++.||.+++||...++. ........|...|.+++|+|++. .++++ +.|+
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 67888999999999999 578999999999999999987653 23466788999999999999654 55554 5799
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~L 740 (819)
+|++||++++++...+..+ ..+.++.|++++..+++++ |..|+.|++||+.+++++..+. |.+.|.+++|+|+|+.|
T Consensus 302 ~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~s-g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l 379 (420)
T 4gga_A 302 HIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV 379 (420)
T ss_dssp EEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred EEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEE-ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9999999999998888754 6788999999999877665 4589999999999999999885 67889999999999999
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
++ |+.|+.|++||+.+..+....+.+...+....+
T Consensus 380 ~S--~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 380 AS--AAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp EE--EETTTEEEEECCSCSSCC---------------
T ss_pred EE--EecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 98 779999999999877766666555544444443
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-26 Score=254.58 Aligned_cols=240 Identities=22% Similarity=0.429 Sum_probs=200.8
Q ss_pred eEEEEEecCC---eEEEEECCCeEEEEEcCC--------CceEEEEeccCCCCCeEEEEEcCCCC-EEEEEecCceEEEe
Q psy10114 515 YLNLVDWSSQ---NVLSVGLGSCVYLWSACT--------SQVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVW 582 (819)
Q Consensus 515 yv~~ldwS~~---~LLa~g~Dg~V~LWd~~t--------g~~~~l~~l~~h~~~VtsLafSpdG~-~LAsGs~DGtI~IW 582 (819)
.++++.|+++ .+++++.+|.|++|+..+ ++...+..+.+|...|++++|+|++. +|++|+.||.|++|
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 209 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEE
Confidence 3556777754 577888899999999976 22334456778999999999999998 99999999999999
Q ss_pred ecCCceE-------EEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCC-ccceEEEecccCCeEEEEECCCC
Q psy10114 583 DVSVAKQ-------VHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPN-SQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 583 Dl~tgk~-------i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~-~~~v~~l~gH~~~VtsLafSpdg 651 (819)
|+.++.. ...+.+|...|.+++|+ +..+++++.||.|++||+++.. ......+..|...|.+++|+|++
T Consensus 210 d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 289 (430)
T 2xyi_A 210 DINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289 (430)
T ss_dssp ETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC
T ss_pred eCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC
Confidence 9987321 45677999999999994 5689999999999999999763 23456678999999999999988
Q ss_pred C-EEEEEECCCeEEEEECCC-CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-------------
Q psy10114 652 Q-YLASGGNDNRLYVWNLHS-MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG------------- 716 (819)
Q Consensus 652 ~-~LaSGS~DGtI~IWDl~t-~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg------------- 716 (819)
+ .+++|+.||.|++||+++ ++++..+..|...|.+++|+|+++.++++++ .|+.|++||+...
T Consensus 290 ~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 290 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE--TTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred CCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe--CCCcEEEEeCCCCccccCccccccCC
Confidence 7 789999999999999998 5678899999999999999999988888876 8999999999872
Q ss_pred -ceeEEE-cCCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCC
Q psy10114 717 -QPMQCV-DTGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 717 -~~v~~l-~~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s 758 (819)
+.+... .+...|.+++|+|+++ .+++ ++.||.|++|++..
T Consensus 368 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s--~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 368 PELLFIHGGHTAKISDFSWNPNEPWIICS--VSEDNIMQVWQMAE 410 (430)
T ss_dssp TTEEEECCCCSSCEEEEEECSSSTTEEEE--EETTSEEEEEEECH
T ss_pred cceEEEcCCCCCCceEEEECCCCCCEEEE--EECCCCEEEeEccc
Confidence 344444 3567799999999999 6666 67899999999864
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-26 Score=274.12 Aligned_cols=241 Identities=20% Similarity=0.340 Sum_probs=208.3
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC--CCEEEEEecCceEEEeecCCce-
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER--GNLVAVGTHHGYVQVWDVSVAK- 588 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd--G~~LAsGs~DGtI~IWDl~tgk- 588 (819)
-.+.+++|+ ++.+++++.||.|++||..++.......+.+|.+.|++++|+++ +++|++|+.||.|++||+.+++
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 346777777 45799999999999999987766667788899999999999988 9999999999999999999987
Q ss_pred -EEEEEecCCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-------------C
Q psy10114 589 -QVHKLVGHTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-------------D 650 (819)
Q Consensus 589 -~i~tl~gHs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-------------d 650 (819)
.+..+.+|...|.+++|+ ++.+++|+.||.|++||++++.......+.+|...|.+++|+| +
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d 169 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGG
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCC
Confidence 778888999999999994 6799999999999999999886556677889999999999999 5
Q ss_pred CCEEEEEECCCeEEEEECCCC----ceeEEEecCCCCEEEEEEcCCC--CeEEEEEccCCCCeEEEEECCCCcee-----
Q psy10114 651 NQYLASGGNDNRLYVWNLHSM----SPLQTYTEHLAAVKAIAWSPHH--HGLLASGGGTADRCIRFWNTLTGQPM----- 719 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~----~~i~t~~~h~~~VtsLafSPdg--~~LLaSGgGs~DgtIrIWDl~tg~~v----- 719 (819)
++.+++|+.||.|++||++++ .....+.+|.+.|.+++|+|++ ..++++|+ .||.|++||+++++..
T Consensus 170 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s--~Dg~I~iwd~~~~~~~~~~~~ 247 (753)
T 3jro_A 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWKKTL 247 (753)
T ss_dssp GCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--SSSCEEEEEESSSSSCCBCCB
T ss_pred CCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe--cCCEEEEecCCCCCCcceeEE
Confidence 899999999999999999877 4567788999999999999993 34555555 7999999999987421
Q ss_pred -EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 720 -QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 720 -~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
....+...|.+++|+|+|+.+++ |+.||.|++||+.+
T Consensus 248 ~~~~~~~~~v~~l~~spdg~~l~s--~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 248 LKEEKFPDVLWRASWSLSGNVLAL--SGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSCCSSCCCCEEECTTTCCEEE--ECSSSCEECCBCCS
T ss_pred eccCCCCCceEEEEEcCCCCEEEE--EcCCCEEEEEecCC
Confidence 11235678999999999999998 78899999999874
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=255.64 Aligned_cols=251 Identities=11% Similarity=0.082 Sum_probs=183.7
Q ss_pred ecCCeEEEEECCCeEEEEEcCCCceEE---EEeccCCCCCeEEEEEcC--------CCCEEEEEecCceEEEeecCCceE
Q psy10114 521 WSSQNVLSVGLGSCVYLWSACTSQVTR---LCDLSADGNSVTSVAWNE--------RGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 521 wS~~~LLa~g~Dg~V~LWd~~tg~~~~---l~~l~~h~~~VtsLafSp--------dG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
..+..+++++.|++|+|||..+++... +..+.+|.+.|++++|+| ||++||+|+.|++|+|||+.++++
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 345578999999999999999886543 334688999999999997 889999999999999999999999
Q ss_pred EEEEecCCCCeEEEEeC--C-ceeeeccCCCeEEEEECCCCCccc-----------------------eEEEecccCCeE
Q psy10114 590 VHKLVGHTARVGALAWN--G-DMLSSGSRDRMILQRDVRTPNSQS-----------------------ERRLVGHRQEVC 643 (819)
Q Consensus 590 i~tl~gHs~~V~sLawn--g-~~LaSGS~DGtI~IWDi~t~~~~~-----------------------v~~l~gH~~~Vt 643 (819)
+..+.+|...|.+++|+ + ++|++|+.||+|++||+++++... .....+|...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 99999999999999995 3 479999999999999998764211 012346778899
Q ss_pred EEEEC-CCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 644 GLKWS-PDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 644 sLafS-pdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
++.|+ +|++.+++++.|+++++||+..++....+..|...+..+.+.|+.+...
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------------- 313 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS------------------------- 313 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC-------------------------
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc-------------------------
Confidence 99986 7999999999999999999999888888888887777777777643211
Q ss_pred cCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 723 DTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 723 ~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
.........+++ .++.+++ +|+.|+.|++||..+++......+|..+|.+++|+|||++||+++.|| +.+|++.
T Consensus 314 -~~~~~~~~~~~~~~~~~~~~-sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 314 -LFPSLLGACPHPRYMDYFAT-AHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp -SSCCSSCCEECSSCTTEEEE-EETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred -ccCcceeEEEccCCCCEEEE-EECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 111112223344 3333333 388999999999999999888889999999999999999999998765 6666653
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-25 Score=242.83 Aligned_cols=266 Identities=9% Similarity=0.046 Sum_probs=220.6
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE-----EEecCCCCeEEEEe--C
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH-----KLVGHTARVGALAW--N 606 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~-----tl~gHs~~V~sLaw--n 606 (819)
.|+.+|..++....+..+..+ ..+.+++|+|++.++++++.++.|++||+.+++... .+.+|.+.|.+++| +
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH 180 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC
Confidence 555666655655555555543 456699999977888888889999999999998887 34578999999999 5
Q ss_pred CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE-ECCCeEEEEECCCCceeEEEecCCCCEE
Q psy10114 607 GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG-GNDNRLYVWNLHSMSPLQTYTEHLAAVK 685 (819)
Q Consensus 607 g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DGtI~IWDl~t~~~i~t~~~h~~~Vt 685 (819)
+..+++++.|+.|++||+++++ ....+..|...+.+++|+|+++.++++ +.|+.|++||+++++.+..+..+ ..+.
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~ 257 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPR 257 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEE
T ss_pred CEEEEEECCCCEEEEEECCCce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCce
Confidence 7799999999999999998765 346677889999999999999988554 47999999999999888877654 5689
Q ss_pred EEEEcCCCCeEEEEEccC-----CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 686 AIAWSPHHHGLLASGGGT-----ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 686 sLafSPdg~~LLaSGgGs-----~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k 760 (819)
+++|+|+++.+++++.+. .|+.|++||+.+++.+..+.+...+.+++|+|+++.++++ +..++.|.+||..+++
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS-DMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE-ETTTTEEEEEETTTTE
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE-ecCCCEEEEEECCCCc
Confidence 999999999887765322 4889999999999988888777789999999999887765 5789999999999998
Q ss_pred EEEEEecCCCCEEEEEEecCCCEEEEEeC---------------CCcEEEEECCCCceec
Q psy10114 761 QVAKLTGHSYRVLYLAMSPDGEAIVTGAG---------------DETLRFWNVFSKVRSQ 805 (819)
Q Consensus 761 ~l~sl~gH~~~VtsLafSpDG~~LaSGS~---------------DGtIrIWdl~s~~~~~ 805 (819)
.+..+. +...+.+++|+|+|+++++++. ||.|++||+.+++...
T Consensus 337 ~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 337 VQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred EEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 888776 6778999999999999988876 5799999998877544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=248.99 Aligned_cols=234 Identities=9% Similarity=0.062 Sum_probs=187.4
Q ss_pred EEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCC-------ccceEE
Q psy10114 562 AWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPN-------SQSERR 634 (819)
Q Consensus 562 afSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~-------~~~v~~ 634 (819)
.+.++++.+++|+.||.|++||+++++.+..+. ...|.++.|++. +++|+.|++|++|+..... ......
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 344578899999999999999999999888877 466777888777 9999999999999876321 111222
Q ss_pred -EecccCCeEEEEECC--CCCEEEEEECCCeEEEEECCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 635 -LVGHRQEVCGLKWSP--DNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 635 -l~gH~~~VtsLafSp--dg~~LaSGS~DGtI~IWDl~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
..+|.+.|.+++|+| +++++++|+.||+|++||+++++...... .+...|.+++|+|++. ++++|+ .|+.|++
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~--~dg~i~i 196 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYS--PDGILDV 196 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEEC--TTSCEEE
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEc--CCCEEEE
Confidence 236678899999999 99999999999999999999999877664 4556899999999998 455554 8999999
Q ss_pred EECCCCcee-EEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec---CCCCEE--EEEEecCCC
Q psy10114 711 WNTLTGQPM-QCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG---HSYRVL--YLAMSPDGE 782 (819)
Q Consensus 711 WDl~tg~~v-~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g---H~~~Vt--sLafSpDG~ 782 (819)
||+++++.+ ..+. |...|.+++|+|++..+++ ++ ++.|++||+++++.+..+.. |...+. +++|+|+|+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s--~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV--EC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE--EE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE--Ee-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 999999887 6664 5789999999999999998 55 45999999998876654443 333443 699999999
Q ss_pred EEEEEeC-CCcEEEEECCCCcee
Q psy10114 783 AIVTGAG-DETLRFWNVFSKVRS 804 (819)
Q Consensus 783 ~LaSGS~-DGtIrIWdl~s~~~~ 804 (819)
+|++++. |+.|++|++.++.+.
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~ 296 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKN 296 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCS
T ss_pred EEEEecCCCCcEEEEEEcccccc
Confidence 9999998 999999999766543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=266.60 Aligned_cols=251 Identities=10% Similarity=0.063 Sum_probs=201.9
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+.+++|+ |+.+++++.|++|+ |...++ .+.+|...|.+++|+|+| .++.+.+|+. +....+
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~--d~~~~~-----~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~---~~~~~~ 80 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIG--QPKYAK-----DINCNSKNLFHVKEFPLE-------FENKLDFELA---QQNGLL 80 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEE--EECCCS-----CCSSBGGGTEEEEEECCC-------CCCTTTTSCC---CSSCSS
T ss_pred EEEEEECCCCCEEEEEcCCceee--cccccc-----eecCCCccEEEEEECCCC-------CcceEEEEeC---CCceEe
Confidence 4455666 56899999999999 766554 347899999999999999 4555555543 322233
Q ss_pred e-cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccC-----CeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 594 V-GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ-----EVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 594 ~-gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~-----~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
. .|...|.+++| +|..|++++.||.|++||... ....+. |.. .|.+++|||||++||+|+.||+|++
T Consensus 81 ~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 81 NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 3 56889999999 577999999999999999544 334445 554 5999999999999999999999999
Q ss_pred EECCCCce-------eEEE----ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce---eEEE--cCCCCeE
Q psy10114 666 WNLHSMSP-------LQTY----TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP---MQCV--DTGSQVC 729 (819)
Q Consensus 666 WDl~t~~~-------i~t~----~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~---v~~l--~~~s~V~ 729 (819)
||++++.. +.++ .+|.+.|.+++|+|+| +++++ .|++|++||+.+++. .+.+ .+...|.
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass---~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAAL---SNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEE---TTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEe---CCCeEEEEECCCCccccceeeecccccCcEE
Confidence 99998753 5676 5677899999999998 55444 699999999988774 2455 3557899
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE--ecCCCEEEEEeCCCcEEEEECC
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM--SPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf--SpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+++|+ |+.+++ ++ ++.|++||..+++......+|.+.|.+++| +||++.+++++.||+ ++|...
T Consensus 231 svaFs--g~~LAS--a~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 231 DLKIV--DYKVVL--TC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEE--TTEEEE--EC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEE--CCEEEE--Ee-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999 688887 43 699999999987775444489999999999 999999999999999 999986
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-23 Score=226.90 Aligned_cols=281 Identities=16% Similarity=0.087 Sum_probs=221.3
Q ss_pred EEEEEecC--CeE-EEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEE
Q psy10114 516 LNLVDWSS--QNV-LSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 516 v~~ldwS~--~~L-La~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~ 591 (819)
+.++.|++ +.+ ++++.++.|++||..+++...... .+ ..+.+++|+|+|++|++++ .++.|++||+.+++.+.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--AG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--CC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 56677764 455 455589999999999988765433 33 4899999999999886554 67999999999999988
Q ss_pred EEecCCCCeEEEEeC--Ccee-eeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE-EEEECCCeEEEEE
Q psy10114 592 KLVGHTARVGALAWN--GDML-SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~gHs~~V~sLawn--g~~L-aSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L-aSGS~DGtI~IWD 667 (819)
.+..+ ..+.+++|+ ++.+ ++++.|+.|++||+++++. ...+..+ ..+.+++|+|+++.+ ++++.|+.|++||
T Consensus 111 ~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 111 TVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 88755 468999994 5555 7888999999999988653 3444444 567999999999987 5777899999999
Q ss_pred CCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC
Q psy10114 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 668 l~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss 747 (819)
+++++.+..+. +...+.+++|+|+++.+++++.+..++.|++||+.+++.+..+..+..+.+++|+|+++.++++ +..
T Consensus 187 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s-~~~ 264 (391)
T 1l0q_A 187 TVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA-LSF 264 (391)
T ss_dssp TTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE-ETT
T ss_pred CCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE-cCC
Confidence 99998877776 5668899999999998887763235899999999999999888888889999999999988654 678
Q ss_pred CCeEEEEECCCCcEEEEEecCCCCEE---EEE------------EecCC----------CEEEEEeCCCcEEEEECCCCc
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYRVL---YLA------------MSPDG----------EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~Vt---sLa------------fSpDG----------~~LaSGS~DGtIrIWdl~s~~ 802 (819)
|+.|++||+.+++.+..+..|..+.. .+. |+.+. ..+...+.|...++|++.++.
T Consensus 265 d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 265 XNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred CCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence 99999999999999998887655421 122 32221 345566778999999998876
Q ss_pred eec
Q psy10114 803 RSQ 805 (819)
Q Consensus 803 ~~~ 805 (819)
...
T Consensus 345 ~~~ 347 (391)
T 1l0q_A 345 SSK 347 (391)
T ss_dssp EEC
T ss_pred ccC
Confidence 543
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-24 Score=234.49 Aligned_cols=286 Identities=15% Similarity=0.097 Sum_probs=196.2
Q ss_pred CCCcCCcceEEEEEecCC----eEEEEECCCeEEEEEcCCC-ceEEEEeccCCCCCeEEEEEcCCCC-EEEEEecC---c
Q psy10114 507 APELQDDFYLNLVDWSSQ----NVLSVGLGSCVYLWSACTS-QVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHH---G 577 (819)
Q Consensus 507 ap~l~dDfyv~~ldwS~~----~LLa~g~Dg~V~LWd~~tg-~~~~l~~l~~h~~~VtsLafSpdG~-~LAsGs~D---G 577 (819)
.|+-.-..-+.++-|-.. -.+.+..+..|++|+..++ +..++..+..|+.+|..+.+.||.. ++.++-.+ +
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 112 (356)
T 2w18_A 33 NPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIR 112 (356)
T ss_dssp CCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEE
T ss_pred CCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeecccccc
Confidence 343333445677777632 2455566789999999887 3456677777887787777777542 22222211 1
Q ss_pred eEEEeecCCc----eEEEEEecCCCCeEEEEeCCceeeecc--CCCeEEEEECCCCCccceEEEecccCCeEEEEECC--
Q psy10114 578 YVQVWDVSVA----KQVHKLVGHTARVGALAWNGDMLSSGS--RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-- 649 (819)
Q Consensus 578 tI~IWDl~tg----k~i~tl~gHs~~V~sLawng~~LaSGS--~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-- 649 (819)
.|+..-.... +......+|...|.++ -+++.+.+++ .|+.|++|++.... .....+.+|...+..++|++
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG-~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDG-GGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTS-CEEEEEEECCCSSCEEEEEEEE
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCC-ceeeeeccCCCceeeEEeeccC
Confidence 1111111111 1122223344444443 1344444422 59999999995533 35567789999999999999
Q ss_pred -CCCEEEEEECCCeEEEEECCCCceeEEEecCC---CCEEEEEEcCCCCeEEEE---------EccCCCCeEEEEECCCC
Q psy10114 650 -DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHL---AAVKAIAWSPHHHGLLAS---------GGGTADRCIRFWNTLTG 716 (819)
Q Consensus 650 -dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~---~~VtsLafSPdg~~LLaS---------GgGs~DgtIrIWDl~tg 716 (819)
++..||+|+.|++|+|||+++++.++++.+|. ..+.+++|+|+|..+++. .+|+.|++|++||..++
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 77999999999999999999999999998653 467788999999876431 12358999999999999
Q ss_pred ceeEEEc------CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEecCCCEEEEEeC
Q psy10114 717 QPMQCVD------TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL-YLAMSPDGEAIVTGAG 789 (819)
Q Consensus 717 ~~v~~l~------~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vt-sLafSpDG~~LaSGS~ 789 (819)
+.+..+. +...+.+.. .++..+++ |+.|++|++||+.+++.+.++.+|...+. .++|||||++|++|+.
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~--~sg~~lAS--gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGD--VKDHCAAA--ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEE--EETTEEEE--EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred EEEEEEEeeccCCCcceeEccc--cCCCEEEE--EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 8876541 122233333 33667777 88999999999999999999999987655 5899999999999999
Q ss_pred CCcEEEEEC
Q psy10114 790 DETLRFWNV 798 (819)
Q Consensus 790 DGtIrIWdl 798 (819)
|++|++||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999995
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-23 Score=217.15 Aligned_cols=241 Identities=23% Similarity=0.436 Sum_probs=201.8
Q ss_pred CcceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc-e
Q psy10114 512 DDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA-K 588 (819)
Q Consensus 512 dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg-k 588 (819)
+...+.++.|++ +.+++|+.|+.|++||..+++... .+.+|...+.++++ ++..+++|+.++.+++|+...+ .
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~--~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR--NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE--EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCce
Confidence 344577888874 679999999999999999987654 56678888877665 4679999999999999998765 5
Q ss_pred EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCc--cceEEEecccCCeEEEEECCCCCEE---EEEECCC
Q psy10114 589 QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNS--QSERRLVGHRQEVCGLKWSPDNQYL---ASGGNDN 661 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~--~~v~~l~gH~~~VtsLafSpdg~~L---aSGS~DG 661 (819)
.+..+.+|...+.++++ +++.+++++.||.|++||+++++. ........+.+.|.++++++++..+ ++++.++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 221 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 221 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTC
T ss_pred eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCC
Confidence 67788899999999999 578999999999999999987653 2345566788899999999976533 4667889
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~L 740 (819)
.|++||.+........ .+...+..++|+|++..+++++ |..|+.|++||+++++++..+. |.+.|.+++|+|+|+.|
T Consensus 222 ~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s-g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l 299 (318)
T 4ggc_A 222 HIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV 299 (318)
T ss_dssp EEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred EEEEEecccccccccc-cceeeeeeeeecccccceEEEE-EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9999999888776655 4678899999999999877654 4589999999999999999885 67889999999999999
Q ss_pred EEEEecCCCeEEEEECCCCc
Q psy10114 741 VSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k 760 (819)
++ |+.|+.|++||+.+..
T Consensus 300 ~S--~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 300 AS--AAADETLRLWRCFELD 317 (318)
T ss_dssp EE--EETTTEEEEECCSCCC
T ss_pred EE--EecCCeEEEEECCCCC
Confidence 98 7899999999987654
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=252.26 Aligned_cols=252 Identities=13% Similarity=0.070 Sum_probs=192.7
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
..+..+.++++. .+..|+..+++......+ .|.+.|.+++|||+|+.||+++.||.|++||.+. ++..+
T Consensus 53 ~~v~~V~FsPdg--------~~~~~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l 121 (588)
T 2j04_A 53 KNLFHVKEFPLE--------FENKLDFELAQQNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL 121 (588)
T ss_dssp GGTEEEEEECCC--------CCCTTTTSCCCSSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC
T ss_pred ccEEEEEECCCC--------CcceEEEEeCCCceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec
Confidence 345555555443 444444444432222233 3478999999999999999999999999999544 66666
Q ss_pred ecCCC-----CeEEEEe--CCceeeeccCCCeEEEEECCCCCc-----cceEEE----ecccCCeEEEEECCCCCEEEEE
Q psy10114 594 VGHTA-----RVGALAW--NGDMLSSGSRDRMILQRDVRTPNS-----QSERRL----VGHRQEVCGLKWSPDNQYLASG 657 (819)
Q Consensus 594 ~gHs~-----~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~-----~~v~~l----~gH~~~VtsLafSpdg~~LaSG 657 (819)
. |.. .|.+++| +|++|++|+.||+|++||+.++.. .....+ .+|.+.|.+++|+||| ++++
T Consensus 122 ~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laas 198 (588)
T 2j04_A 122 D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAA 198 (588)
T ss_dssp C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEE
T ss_pred c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEE
Confidence 6 665 5999999 688999999999999999988642 123555 6677899999999999 8899
Q ss_pred ECCCeEEEEECCCCce---eEEE-ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-eEEEcCCCCeEEEE
Q psy10114 658 GNDNRLYVWNLHSMSP---LQTY-TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-MQCVDTGSQVCNLA 732 (819)
Q Consensus 658 S~DGtI~IWDl~t~~~---i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-v~~l~~~s~V~sLa 732 (819)
+.|++|++||+.+++. .+++ .+|...|.+++|+ |. .+++++ +++|++||+.+++. .....+.+.+..++
T Consensus 199 s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~---~~tIkLWd~~~~~~~~~~~gh~~~V~~va 272 (588)
T 2j04_A 199 LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC---PGYVHKIDLKNYSISSLKTGSLENFHIIP 272 (588)
T ss_dssp ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC---SSEEEEEETTTTEEEEEECSCCSCCCEEE
T ss_pred eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC-EEEEEe---CCeEEEEECCCCeEEEEEcCCCceEEEEE
Confidence 9999999999988774 3566 4788999999999 45 455553 69999999999888 44558888999999
Q ss_pred E--ccCCCEEEEEEecCCCeEEEEECCCCc-----------------------EEEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 733 W--SKHSSELVSTHGYSQNQILVWKYPTLT-----------------------QVAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 733 f--Spdg~~LastsGssDg~I~IWDl~s~k-----------------------~l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
| +|++..+++ ++.+|. ++|...... ....+. +...|.+++|||||+.+|++
T Consensus 273 ~~~s~d~~~La~--a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~lA~~ 348 (588)
T 2j04_A 273 LNHEKESTILLM--SNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSIAIV 348 (588)
T ss_dssp ETTCSSCEEEEE--CSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEEEEE
T ss_pred eeeCCCCCEEEE--EcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEEEEE
Confidence 9 999999888 888999 999874211 011111 13348999999999999988
Q ss_pred eC
Q psy10114 788 AG 789 (819)
Q Consensus 788 S~ 789 (819)
+.
T Consensus 349 ~~ 350 (588)
T 2j04_A 349 YD 350 (588)
T ss_dssp EE
T ss_pred Ee
Confidence 74
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-23 Score=232.64 Aligned_cols=270 Identities=15% Similarity=0.125 Sum_probs=213.2
Q ss_pred eEEEEE----CCC----eEEEEEc--CCCceEEEEeccCCCCCeEEEEEcC--------------CCCEEEEEecC----
Q psy10114 525 NVLSVG----LGS----CVYLWSA--CTSQVTRLCDLSADGNSVTSVAWNE--------------RGNLVAVGTHH---- 576 (819)
Q Consensus 525 ~LLa~g----~Dg----~V~LWd~--~tg~~~~l~~l~~h~~~VtsLafSp--------------dG~~LAsGs~D---- 576 (819)
.+++++ .+| .|++||+ .+++......+.+|...+..+++++ .+..++.++.+
T Consensus 77 ~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~ 156 (415)
T 2hqs_A 77 AVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQ 156 (415)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSS
T ss_pred EEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCC
Confidence 455655 356 8999999 8888654455777777788777764 25677766654
Q ss_pred --ceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCC---eEEEEECCCCCccceEEEecccCCeEEEEECC
Q psy10114 577 --GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDR---MILQRDVRTPNSQSERRLVGHRQEVCGLKWSP 649 (819)
Q Consensus 577 --GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DG---tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp 649 (819)
+.|++||++ ++..+.+.+|...+.+++| +|+.|++++.|+ .|++||+++++. ..+..|...+.+++|+|
T Consensus 157 ~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~---~~l~~~~~~~~~~~~sp 232 (415)
T 2hqs_A 157 FPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV---RQVASFPRHNGAPAFSP 232 (415)
T ss_dssp CCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EEEECCSSCEEEEEECT
T ss_pred ccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE---EEeecCCCcccCEEEcC
Confidence 799999997 4556788889999999999 577899988875 999999998663 45677888999999999
Q ss_pred CCCEEE-EEECCCe--EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC--eEEEEECCCCceeEEEcC
Q psy10114 650 DNQYLA-SGGNDNR--LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR--CIRFWNTLTGQPMQCVDT 724 (819)
Q Consensus 650 dg~~La-SGS~DGt--I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl~tg~~v~~l~~ 724 (819)
||+.|+ +++.|+. |++||+++++. ..+..|...+.+++|+|+|+.+++++. .++ .|.+||+.+++......+
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~--~~g~~~i~~~d~~~~~~~~l~~~ 309 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSD--QAGRPQVYKVNINGGAPQRITWE 309 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCCEECCCS
T ss_pred CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEEC--CCCCcEEEEEECCCCCEEEEecC
Confidence 999888 6666554 99999988775 567788899999999999998887764 344 788889998875544445
Q ss_pred CCCeEEEEEccCCCEEEEEEec-CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC---cEEEEECCC
Q psy10114 725 GSQVCNLAWSKHSSELVSTHGY-SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE---TLRFWNVFS 800 (819)
Q Consensus 725 ~s~V~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG---tIrIWdl~s 800 (819)
+..+.+++|+|+|+.+++++.. .+..|.+||..+++.. .+..+. .+.+++|+|||+.|++++.|+ .|++||+.+
T Consensus 310 ~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 310 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 6778899999999999985432 1358999999988764 455554 899999999999999988877 799999986
Q ss_pred Cce
Q psy10114 801 KVR 803 (819)
Q Consensus 801 ~~~ 803 (819)
+..
T Consensus 388 ~~~ 390 (415)
T 2hqs_A 388 RFK 390 (415)
T ss_dssp CCE
T ss_pred CcE
Confidence 543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-22 Score=210.01 Aligned_cols=267 Identities=10% Similarity=0.136 Sum_probs=194.6
Q ss_pred EEEECCCeEEEEEcC-CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-ceEEEeecC--Cce--EEEEEecCCCCe
Q psy10114 527 LSVGLGSCVYLWSAC-TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-GYVQVWDVS--VAK--QVHKLVGHTARV 600 (819)
Q Consensus 527 La~g~Dg~V~LWd~~-tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-GtI~IWDl~--tgk--~i~tl~gHs~~V 600 (819)
++.+.++.|++|+.. +++...+..+ .+...+.+++|+|+|++|++++.+ +.|.+|+++ +++ .+..+..+. .+
T Consensus 9 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 9 IASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 333678999999985 4444443333 356788999999999999998886 999999997 444 445555444 78
Q ss_pred EEEEe--CCceeeec-cCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCC-CceeE
Q psy10114 601 GALAW--NGDMLSSG-SRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHS-MSPLQ 675 (819)
Q Consensus 601 ~sLaw--ng~~LaSG-S~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~DGtI~IWDl~t-~~~i~ 675 (819)
.+++| +++.++++ ..++.|.+||+..+..............+.+++|+|+++.+++++ .++.|.+||+.+ ++...
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 88999 46656554 458999999995322111222223345688999999999888887 899999999987 55432
Q ss_pred ----EEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC--Cce--eEEEc---C----CCCeEEEEEccCCCE
Q psy10114 676 ----TYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT--GQP--MQCVD---T----GSQVCNLAWSKHSSE 739 (819)
Q Consensus 676 ----t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t--g~~--v~~l~---~----~s~V~sLafSpdg~~ 739 (819)
.... ....+..++|+|+++.+++++. .++.|.+||+.. ++. ..... . ...+..++|+|+|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~--~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 2232 3457889999999998888765 789999999953 433 22222 1 235678999999998
Q ss_pred EEEEEecCCCeEEEEECC----CCcEEEEEecCCCCEEEEEEecCCCEEEEEe-CCCcEEEEECC
Q psy10114 740 LVSTHGYSQNQILVWKYP----TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRFWNVF 799 (819)
Q Consensus 740 LastsGssDg~I~IWDl~----s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl~ 799 (819)
++++ +..++.|.+||+. +.+.+..+..+.. +.+++|+|||++|++++ .|+.|.+|+++
T Consensus 245 l~v~-~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 245 LYAC-DRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEE-ETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEE-ecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 8864 5578999999998 3345555655554 88999999999888887 68999999654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-22 Score=207.97 Aligned_cols=273 Identities=11% Similarity=0.074 Sum_probs=207.9
Q ss_pred CCe-EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceE-EEEEecCCCC
Q psy10114 523 SQN-VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQ-VHKLVGHTAR 599 (819)
Q Consensus 523 ~~~-LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~-i~tl~gHs~~ 599 (819)
++. +++.+.++.|.+||..+++....... +...+ +++|+|+|+++++++. ++.|.+||.++++. ...+..+...
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITL--GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEEC--CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEc--cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC
Confidence 444 56667789999999999988765543 34556 9999999997777665 89999999999987 7777777776
Q ss_pred eEEEEe--CCceeeeccCCC---eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEE-EECCCe-EEEEECCCCc
Q psy10114 600 VGALAW--NGDMLSSGSRDR---MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLAS-GGNDNR-LYVWNLHSMS 672 (819)
Q Consensus 600 V~sLaw--ng~~LaSGS~DG---tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaS-GS~DGt-I~IWDl~t~~ 672 (819)
..+++| ++++++++..++ .|.+||+.+++. ...+. ......+++|+|||+++++ +..++. |.+|++....
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~--~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF--ISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE--EEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCe--EEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 665888 466777665553 899999987653 23333 3456789999999985554 456688 9999987644
Q ss_pred eeE----EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce---eEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 673 PLQ----TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP---MQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 673 ~i~----t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~---v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
.+. ...........++|+|+|+.+++++. .++.|++||+.+++. +..+..+..+..++|+|+|++++++ .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~-~ 239 (331)
T 3u4y_A 163 VLFDTGQEFISGGTRPFNITFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL-T 239 (331)
T ss_dssp CEEEEEEEEECSSSSEEEEEECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE-C
T ss_pred cEeecCCccccCCCCccceEECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEE-E
Confidence 331 22234566899999999998888765 689999999999998 8888888889999999999988775 3
Q ss_pred cCCCeEEEEECCCCcE--EEEEecC----CC---CEEEEEEecCCCEEEEEeC-CCcEEEEECCCCcee
Q psy10114 746 YSQNQILVWKYPTLTQ--VAKLTGH----SY---RVLYLAMSPDGEAIVTGAG-DETLRFWNVFSKVRS 804 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~--l~sl~gH----~~---~VtsLafSpDG~~LaSGS~-DGtIrIWdl~s~~~~ 804 (819)
..++.|.+||..+++. +..+..+ .. ...+++|+|||++|++++. ++.|.+||+.++...
T Consensus 240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 4578899999998877 4444433 21 2355899999998866555 669999999876643
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-23 Score=226.98 Aligned_cols=244 Identities=15% Similarity=0.220 Sum_probs=169.9
Q ss_pred CCeEEEEEc---CCC-CEEEEEecCceEEEeecCCc----------eEEEEEecCCCCeEEEEeC---------------
Q psy10114 556 NSVTSVAWN---ERG-NLVAVGTHHGYVQVWDVSVA----------KQVHKLVGHTARVGALAWN--------------- 606 (819)
Q Consensus 556 ~~VtsLafS---pdG-~~LAsGs~DGtI~IWDl~tg----------k~i~tl~gHs~~V~sLawn--------------- 606 (819)
....++.|. +++ +++++| .|+.|.+|+.... ..+.. ..+..++..+.|+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIG-HDTGITIYCASEEQTPGSTGLTLQELFT-IQTGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEE-ESSEEEEEEEEECCSSSCCSEEEEEEEE-EECSSCEEEEEECTTCEEECC-------
T ss_pred CCCeEEEEeCCCCCCCCEEEEE-CCCCEEEEECCCCCcccccccceeeeEE-EecCCCeeeEeecCCccccccccCCCcc
Confidence 455677784 333 455555 5778999976321 11111 1344455555542
Q ss_pred -------CceeeeccCCCeEEEEECCCCCccc---eEEEecccCCeEEEEECC--------CCCEEEEEECCCeEEEEEC
Q psy10114 607 -------GDMLSSGSRDRMILQRDVRTPNSQS---ERRLVGHRQEVCGLKWSP--------DNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 607 -------g~~LaSGS~DGtI~IWDi~t~~~~~---v~~l~gH~~~VtsLafSp--------dg~~LaSGS~DGtI~IWDl 668 (819)
+..+++|+.|++|++||.+.++... ...+.+|.+.|.+++|+| |+++||+|+.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 3479999999999999998875422 234578999999999997 8899999999999999999
Q ss_pred CCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--------------------------
Q psy10114 669 HSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-------------------------- 722 (819)
Q Consensus 669 ~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-------------------------- 722 (819)
+++.++..+..|...|.+++|+|++..++++|+ .|++|++||+++++.....
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~--~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE--RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE--TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecC--CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 999888888899999999999999987888876 8999999999987654322
Q ss_pred cCCCCeEEEEEc-cCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec--------------------CC
Q psy10114 723 DTGSQVCNLAWS-KHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP--------------------DG 781 (819)
Q Consensus 723 ~~~s~V~sLafS-pdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp--------------------DG 781 (819)
.+...+.++.|+ ++++.+++ +..|+.+++||+.+++....+..|...+..+.+++ ++
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s--~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILA--MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMD 329 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEE--ECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTT
T ss_pred cccccceeeeeecCCCCEEEE--EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCC
Confidence 234567788886 79999998 78999999999998887777776666555544433 34
Q ss_pred CEEEEEeCCCcEEEEECCCCceec
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
.++++|+.||+|++||+.+++...
T Consensus 330 ~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 330 YFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp EEEEEETTTTEEEEEETTCTTCCE
T ss_pred EEEEEECCCCEEEEEECCCCcEEE
Confidence 467788899999999999876543
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=204.16 Aligned_cols=255 Identities=11% Similarity=0.107 Sum_probs=193.9
Q ss_pred EECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-ceEEEEEecC-CCCeEEEEe-
Q psy10114 529 VGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-AKQVHKLVGH-TARVGALAW- 605 (819)
Q Consensus 529 ~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-gk~i~tl~gH-s~~V~sLaw- 605 (819)
.+.++.|++||..+++...+. .|...|.+++|+|+|++|++++ ++.|.+||+++ ++......++ ...+.+++|
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~---~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVW---QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEE---EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCcceeEEEEeCCCCceeeec---cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 356789999999998876543 3578899999999999999987 78999999999 8777666666 367888999
Q ss_pred -CCceeeecc--CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE-EEECCCeEEEEECCC-CceeEEEecC
Q psy10114 606 -NGDMLSSGS--RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA-SGGNDNRLYVWNLHS-MSPLQTYTEH 680 (819)
Q Consensus 606 -ng~~LaSGS--~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La-SGS~DGtI~IWDl~t-~~~i~t~~~h 680 (819)
+++.+++++ .++...+|+++..... ...+..+ ..+..++|+|+++.++ +++.|+.+.+|++.. +.....+..+
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 577888887 3345555555432221 2333333 3488999999999887 778899999998632 3345666778
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC-CCceeEEE-cCCCCeEEEEEccCCCEEEEEEec---------CCC
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL-TGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGY---------SQN 749 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~-tg~~v~~l-~~~s~V~sLafSpdg~~LastsGs---------sDg 749 (819)
...+.+++|+|+++.+++++. .++.+++|++. .+.....+ .+...+..++|+|+|+.+++.+.. .++
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSS--RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEE
T ss_pred CCccccceECCCCCEEEEEec--CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCce
Confidence 889999999999998887764 68889999876 44444444 345568899999999999886433 226
Q ss_pred eEEEEECCCCcE--EEEEecCCCCEEEEEEecCCCEEEEEeCCC
Q psy10114 750 QILVWKYPTLTQ--VAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791 (819)
Q Consensus 750 ~I~IWDl~s~k~--l~sl~gH~~~VtsLafSpDG~~LaSGS~DG 791 (819)
.|.+||+.+++. +..+.+|...+.+++|+|||+.|++++.|.
T Consensus 250 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 250 RVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 799999988765 445558888999999999999999887664
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-21 Score=225.90 Aligned_cols=275 Identities=11% Similarity=0.144 Sum_probs=217.5
Q ss_pred EecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec--CCceEEEEEecCC
Q psy10114 520 DWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV--SVAKQVHKLVGHT 597 (819)
Q Consensus 520 dwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl--~tgk~i~tl~gHs 597 (819)
+.++..+++.+.++.|.+||..+++....... ++ .+.+++|+|||++|++++.|+.|.+||+ .+++.+.++.. .
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-ST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEec-Cc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 34455677777889999999999987664432 22 3899999999999999999999999999 88998888874 4
Q ss_pred CCeEEEEeC------Cceeeecc-CCCeEEEEECCCCCccceEEEec----------ccC-CeEEEEECCCCCE-EEEEE
Q psy10114 598 ARVGALAWN------GDMLSSGS-RDRMILQRDVRTPNSQSERRLVG----------HRQ-EVCGLKWSPDNQY-LASGG 658 (819)
Q Consensus 598 ~~V~sLawn------g~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~g----------H~~-~VtsLafSpdg~~-LaSGS 658 (819)
..+..++|+ |+++++++ .+++|.+||..+.+.. ..+.. |.. .+.++.++++++. +++..
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~--~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK--QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE--EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc--eeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 567888885 45787777 4899999999886643 33332 223 7899999997765 56667
Q ss_pred CCCeEEEEECCCCceeE--EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-----CCeEEE
Q psy10114 659 NDNRLYVWNLHSMSPLQ--TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-----SQVCNL 731 (819)
Q Consensus 659 ~DGtI~IWDl~t~~~i~--t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-----s~V~sL 731 (819)
.+++|.+||..+.+.+. .+ .+...+.+++|+|+|+++++++. .+++|.+||+.+++.+..+..+ .....+
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~ 376 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 376 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE
T ss_pred CCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEec--CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc
Confidence 88999999998876544 34 35566788999999998888765 6899999999999998887632 223333
Q ss_pred EEccCCCEEEEEEecCCCeEEEEECCC-------CcEEEEEecCCCCEEEEEEecCCCEEEEEe-------CCCcEEEEE
Q psy10114 732 AWSKHSSELVSTHGYSQNQILVWKYPT-------LTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-------GDETLRFWN 797 (819)
Q Consensus 732 afSpdg~~LastsGssDg~I~IWDl~s-------~k~l~sl~gH~~~VtsLafSpDG~~LaSGS-------~DGtIrIWd 797 (819)
++|++..++++....|++|.+||..+ ++.+.++.+|.+.+..++++|||++|++++ .+++|.+||
T Consensus 377 -~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 377 -VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp -EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred -CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 46775555554334689999999988 899999999998899999999999999987 277999999
Q ss_pred CCCCcee
Q psy10114 798 VFSKVRS 804 (819)
Q Consensus 798 l~s~~~~ 804 (819)
+.+.+..
T Consensus 456 ~~~~~~~ 462 (543)
T 1nir_A 456 LKNLDAK 462 (543)
T ss_dssp TTCTTSC
T ss_pred CCCCCCC
Confidence 9988765
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-21 Score=220.39 Aligned_cols=285 Identities=12% Similarity=0.108 Sum_probs=224.2
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEc--CCCceEEEEeccCCCCCeEEEEEcC----CCCEEEEEec-CceEEEeecCCce
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSA--CTSQVTRLCDLSADGNSVTSVAWNE----RGNLVAVGTH-HGYVQVWDVSVAK 588 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~--~tg~~~~l~~l~~h~~~VtsLafSp----dG~~LAsGs~-DGtI~IWDl~tgk 588 (819)
...++.+++.+++++.|+.|.+||+ .+++... .+. +...+.+++|+| ||+++++++. +++|.+||..+++
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~--~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA--EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE--EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE--EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 3345555778999999999999999 7776544 344 346789999999 9999999985 8999999999999
Q ss_pred EEEEEecC-----------CCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE
Q psy10114 589 QVHKLVGH-----------TARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 589 ~i~tl~gH-----------s~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L 654 (819)
.+.++..+ ...+.++.++ +..+++...++.|.+||..+.+......+ .+...+.++.|+|+|+++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEE
Confidence 99888752 2378899984 33677888999999999988654332233 456678899999999987
Q ss_pred EEEE-CCCeEEEEECCCCceeEEEec----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-------CceeEEE
Q psy10114 655 ASGG-NDNRLYVWNLHSMSPLQTYTE----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-------GQPMQCV 722 (819)
Q Consensus 655 aSGS-~DGtI~IWDl~t~~~i~t~~~----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-------g~~v~~l 722 (819)
++++ .+++|.+||..+++.+..+.. |.+....+ ++|++..+++++. ..|++|.+||+.+ .+.++.+
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc-CCCceEEEEEeCCCCCchhcCeEEEEE
Confidence 6655 588999999999999888874 54443333 5788666777753 2489999999998 7888888
Q ss_pred cC-CCCeEEEEEccCCCEEEEEEec-------CCCeEEEEECCCCcEE-EEE--------ecCCCCEEEEEEecCCCEEE
Q psy10114 723 DT-GSQVCNLAWSKHSSELVSTHGY-------SQNQILVWKYPTLTQV-AKL--------TGHSYRVLYLAMSPDGEAIV 785 (819)
Q Consensus 723 ~~-~s~V~sLafSpdg~~LastsGs-------sDg~I~IWDl~s~k~l-~sl--------~gH~~~VtsLafSpDG~~La 785 (819)
.. +..+..++++|+|+.+++ +. .++.|.+||+.+++.. ..+ ..+..++.+++|+|||+.++
T Consensus 417 ~~~g~~~~~v~~~pdg~~l~v--~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 417 QGQGGGSLFIKTHPKSSHLYV--DTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp ECSCSCCCCEECCTTCCEEEE--CCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred EcCCCCceEEEcCCCCCcEEE--ecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 75 456788999999999999 43 2679999999998877 443 35677899999999999998
Q ss_pred EEe-----CCCcEEEEECCCCceecccc
Q psy10114 786 TGA-----GDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 786 SGS-----~DGtIrIWdl~s~~~~~k~~ 808 (819)
++. .|+.|.+||..+++......
T Consensus 495 ~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 495 FSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred EEeecCCCCCCeEEEEECCCceEEEeec
Confidence 763 47999999999998765544
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-21 Score=212.91 Aligned_cols=248 Identities=15% Similarity=0.110 Sum_probs=197.0
Q ss_pred CCeEEEEECC------CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc---eEEEeecCCceEEEEE
Q psy10114 523 SQNVLSVGLG------SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG---YVQVWDVSVAKQVHKL 593 (819)
Q Consensus 523 ~~~LLa~g~D------g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG---tI~IWDl~tgk~i~tl 593 (819)
++.++.++.+ +.|++||..++.... +.+|.+.+.+++|+|||+.|++++.++ .|++||+++++.. .+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~---l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFV---VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEE---EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEE---EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 4566666654 799999998665443 445678999999999999999999875 9999999988765 57
Q ss_pred ecCCCCeEEEEe--CCceee-eccCCCe--EEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-C--eEEE
Q psy10114 594 VGHTARVGALAW--NGDMLS-SGSRDRM--ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-N--RLYV 665 (819)
Q Consensus 594 ~gHs~~V~sLaw--ng~~La-SGS~DGt--I~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-G--tI~I 665 (819)
..|...+.+++| +|+.|+ +++.|+. |++||+++++. ..+..|...+.+++|+|||+.|++++.+ + .|.+
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 778889999999 466666 6666654 99999987652 5677788899999999999999988864 4 6888
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
||+.+++. ..+..+...+.+++|+|+|+.+++++....+..|.+||+.+++... +.....+.+++|+|+|+.+++++
T Consensus 296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~spdg~~l~~~s- 372 (415)
T 2hqs_A 296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLAPNGTMVIYSS- 372 (415)
T ss_dssp EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEECTTSSEEEEEE-
T ss_pred EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEcCCCCEEEEEE-
Confidence 89988764 4556677889999999999988877641124689999999988743 43334899999999999998843
Q ss_pred cCCC--eEEEEECCCCcEEEEEecCCCCEEEEEEecCC
Q psy10114 746 YSQN--QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 746 ssDg--~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG 781 (819)
..++ .|.+||+. +.....+.+|.+.|.+++|+|..
T Consensus 373 ~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 373 SQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred cCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 2233 79999986 56677889999999999999964
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-20 Score=196.98 Aligned_cols=263 Identities=13% Similarity=0.096 Sum_probs=209.4
Q ss_pred EEecCCeEEEEEC-------CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecCceEEEeecCCceEE
Q psy10114 519 VDWSSQNVLSVGL-------GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THHGYVQVWDVSVAKQV 590 (819)
Q Consensus 519 ldwS~~~LLa~g~-------Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~DGtI~IWDl~tgk~i 590 (819)
++.+++.+++++. ++.|.+||..+++....... ...+.+++|+++|+.++++ ..++.|.+||.++++.+
T Consensus 48 ~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 48 YSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK 124 (353)
T ss_dssp EETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred ECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE
Confidence 3444567776664 56899999999987665543 2457789999999966555 45799999999999998
Q ss_pred EEEecCCCC---------eEEEEe--CCceeeecc--CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE
Q psy10114 591 HKLVGHTAR---------VGALAW--NGDMLSSGS--RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG 657 (819)
Q Consensus 591 ~tl~gHs~~---------V~sLaw--ng~~LaSGS--~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG 657 (819)
..+..+... +.+++| +++.+++++ .++.|.+||..+++. ...+..+...+.+++|+|+++.++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL--KTAIQNTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--EEEECCCCTTCCCCEEETTTTEEEEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce--EEEecCCCCccceEEECCCCCEEEEE
Confidence 888765432 678888 566666554 588999999987653 34455455668899999999999999
Q ss_pred ECCCeEEEEECCCCceeEEEec----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEE
Q psy10114 658 GNDNRLYVWNLHSMSPLQTYTE----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAW 733 (819)
Q Consensus 658 S~DGtI~IWDl~t~~~i~t~~~----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLaf 733 (819)
+.++.|.+||..+++.+..+.. +...+.+++|+|+++.+++++. .++.|.+||..+++.+..+..+.. ..++|
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~ 279 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS--KAAEVLVVDTRNGNILAKVAAPES-LAVLF 279 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES--SSSEEEEEETTTCCEEEEEECSSC-CCEEE
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEEcCCC-ceEEE
Confidence 9999999999999998877764 4556889999999998888764 679999999999998888876554 56999
Q ss_pred ccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC
Q psy10114 734 SKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791 (819)
Q Consensus 734 Spdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG 791 (819)
+|+|+.++++ +..++.|.+||..+++.+..+... ..+.+++|+|||++|+++..++
T Consensus 280 s~dg~~l~v~-~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 280 NPARNEAYVT-HRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp ETTTTEEEEE-ETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred CCCCCEEEEE-ECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 9999987774 557899999999999988888754 4689999999999887766654
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-21 Score=200.76 Aligned_cols=269 Identities=10% Similarity=0.059 Sum_probs=206.5
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecCceEEEeecCCceEEEEEec-C----C
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVG-H----T 597 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~g-H----s 597 (819)
+.+++++.++.|.+||..+++.............+.+++|+|+|+.+++ ++.++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 3578889999999999999887665443321114788999999987654 55678999999999998877763 2 1
Q ss_pred CCeEEEEe--CCceeeecc------------CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 598 ARVGALAW--NGDMLSSGS------------RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 598 ~~V~sLaw--ng~~LaSGS------------~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
..+.+++| +++.+++++ .++.|.+||+.+++. ...+.. ...+.+++|+|++++++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--EEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE--EEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 25667888 466787775 579999999987553 233333 4567889999999988887 6899
Q ss_pred EEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC-----------------------eEEEEECCCCceeE
Q psy10114 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR-----------------------CIRFWNTLTGQPMQ 720 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg-----------------------tIrIWDl~tg~~v~ 720 (819)
.+||+.+++.+..+..+... ..++|+|++..+++++. .++ .|.+||+.+++..
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHE--SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCT--TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EEEECCCCcEeeeeeccccC-CCceeCCCccEEeeecc--CCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 99999999888777654311 13378999987766543 333 4789999998875
Q ss_pred EE---cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 721 CV---DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 721 ~l---~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
.. .....+.+++|+|+|+.+++ + ++.|.+||..+++.+..+..+ ..+.+++|+|||++|++++.|+.|++||
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~--~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFG--A--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEE--E--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred EeecCCCCCceeeEEECCCCCEEEE--e--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 22 34457889999999999998 3 689999999999888877644 4578999999999999999999999999
Q ss_pred CCCCceecc
Q psy10114 798 VFSKVRSQR 806 (819)
Q Consensus 798 l~s~~~~~k 806 (819)
+.+++....
T Consensus 308 ~~~~~~~~~ 316 (337)
T 1pby_B 308 AETLEKKGQ 316 (337)
T ss_dssp TTTCCEEEE
T ss_pred CcCCcEEEE
Confidence 998875543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-21 Score=227.28 Aligned_cols=277 Identities=14% Similarity=0.089 Sum_probs=210.9
Q ss_pred EEEEEec--CCeEEEEEC-CC-----eEEEEEcCCCceEEEEeccCCC----------------------CCeEEEEEcC
Q psy10114 516 LNLVDWS--SQNVLSVGL-GS-----CVYLWSACTSQVTRLCDLSADG----------------------NSVTSVAWNE 565 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~-Dg-----~V~LWd~~tg~~~~l~~l~~h~----------------------~~VtsLafSp 565 (819)
+..+.|+ ++.+++++. ++ .|++||..+++...+.....+. ..|.+++|||
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 4455665 567888888 77 8999999999887766544333 3478999999
Q ss_pred CCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCC
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE 641 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~ 641 (819)
||++|++++. +.|.+||+.+++ ....+..|...+.+++| +|+.|++++ ++.|++||+.+++.. .....+...
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~--~~~~~~~~~ 194 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM--QLTADGSTT 194 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE--ECCCCCCSS
T ss_pred CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE--EeccCCccc
Confidence 9999999987 899999998873 45567778889999999 577888877 468999999875532 222222221
Q ss_pred ----------------eEEEEECCCCCEEEEEECCC---------------------------------eEEEEECCC-C
Q psy10114 642 ----------------VCGLKWSPDNQYLASGGNDN---------------------------------RLYVWNLHS-M 671 (819)
Q Consensus 642 ----------------VtsLafSpdg~~LaSGS~DG---------------------------------tI~IWDl~t-~ 671 (819)
+.+++|||||++|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 47799999999999998766 889999988 7
Q ss_pred ceeEEEe--cCCCCEEEEEEcCCCCeEEEEEc--cCCCCeEEEEECCCCceeEEEcCCC-----CeEEEEEccCCCEEEE
Q psy10114 672 SPLQTYT--EHLAAVKAIAWSPHHHGLLASGG--GTADRCIRFWNTLTGQPMQCVDTGS-----QVCNLAWSKHSSELVS 742 (819)
Q Consensus 672 ~~i~t~~--~h~~~VtsLafSPdg~~LLaSGg--Gs~DgtIrIWDl~tg~~v~~l~~~s-----~V~sLafSpdg~~Las 742 (819)
+...... .|...+.+++| |+|+.+++++. +..+..|++||+.+++....+.... .+..++|+|||+.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 353 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS 353 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE
Confidence 7654433 36788999999 99998887653 2346789999999998776654322 4568999999996666
Q ss_pred EEecCCCeEEEEECC-CCcEEEEEecCCCCEEEE-EEecCCCEEEE-EeCCC--cEEEEECCC
Q psy10114 743 THGYSQNQILVWKYP-TLTQVAKLTGHSYRVLYL-AMSPDGEAIVT-GAGDE--TLRFWNVFS 800 (819)
Q Consensus 743 tsGssDg~I~IWDl~-s~k~l~sl~gH~~~VtsL-afSpDG~~LaS-GS~DG--tIrIWdl~s 800 (819)
+..++.+.+|.+. +++ ...+..|...|.++ +|+|||+.|+. ++.|+ .+++|++..
T Consensus 354 --~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 354 --SERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp --ECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred --ecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 6678877777765 445 77788888889887 59999998765 44455 899999864
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-19 Score=193.88 Aligned_cols=268 Identities=13% Similarity=0.128 Sum_probs=190.2
Q ss_pred CCeEEEEEc--CCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec---CceEEEeecCCce--EEEEEecCCCCeEEEE
Q psy10114 532 GSCVYLWSA--CTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH---HGYVQVWDVSVAK--QVHKLVGHTARVGALA 604 (819)
Q Consensus 532 Dg~V~LWd~--~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~---DGtI~IWDl~tgk--~i~tl~gHs~~V~sLa 604 (819)
++.|++|+. .+++...+... .+...+..++|+|||+ |++++. ++.|.+||+.+++ .+..+..+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~-~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLL-AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE-EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeee-eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 455666655 56666554333 3346778899999999 555554 6899999997765 4555556777888888
Q ss_pred e--CCceeeecc-CCCeEEEEECCCC-CccceEEEec---------ccCCeEEEEECCCCCEEEEEECCCeEEEEECC-C
Q psy10114 605 W--NGDMLSSGS-RDRMILQRDVRTP-NSQSERRLVG---------HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH-S 670 (819)
Q Consensus 605 w--ng~~LaSGS-~DGtI~IWDi~t~-~~~~v~~l~g---------H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~-t 670 (819)
| +++.|++++ .++.|.+||+... .......... +...+.+++|+|||+.++++..++.|.+||+. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 8 577777776 7899999999643 2222222221 12348899999999966666678899999998 4
Q ss_pred Ccee--EEEecC-CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC--Cce--eEEEcC-C------CCeEEEEEccC
Q psy10114 671 MSPL--QTYTEH-LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT--GQP--MQCVDT-G------SQVCNLAWSKH 736 (819)
Q Consensus 671 ~~~i--~t~~~h-~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t--g~~--v~~l~~-~------s~V~sLafSpd 736 (819)
++.. ..+..+ ...+..++|+|+|+.+++++. .++.|.+|++.. ++. +..+.. . ..+..++|+|+
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE--LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 5432 222222 336788999999998888765 789999999874 543 222221 1 44889999999
Q ss_pred CCEEEEEEecCCCeEEEEECC---CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC-CcEEEEECC--CCcee
Q psy10114 737 SSELVSTHGYSQNQILVWKYP---TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD-ETLRFWNVF--SKVRS 804 (819)
Q Consensus 737 g~~LastsGssDg~I~IWDl~---s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D-GtIrIWdl~--s~~~~ 804 (819)
|++++++ +..++.|.+|++. +.+.+..+..+...+.+++|+|||++|++++.+ +.|.+|+++ +++..
T Consensus 251 G~~l~v~-~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 251 GHFLYVS-NRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp SCEEEEE-EETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCEEEEE-eCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9988764 4568999999997 335566677777778999999999998887764 899999554 45433
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-20 Score=205.05 Aligned_cols=183 Identities=16% Similarity=0.168 Sum_probs=140.1
Q ss_pred CCCCEEEEEe--cCceEEEeec-CCceEEEEEecCCCCeEEEEe-----CCceeeeccCCCeEEEEECCCCCccceEEEe
Q psy10114 565 ERGNLVAVGT--HHGYVQVWDV-SVAKQVHKLVGHTARVGALAW-----NGDMLSSGSRDRMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 565 pdG~~LAsGs--~DGtI~IWDl-~tgk~i~tl~gHs~~V~sLaw-----ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~ 636 (819)
++|+.+.+++ .|+.|++|++ .+++.+..+.+|...+..++| +++.|++|+.|++|++||+++++ .+.++.
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--~l~tL~ 220 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--LLKKMH 220 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--EEEEEE
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--EEEEEc
Confidence 3444444433 4899999999 558888888888888777777 35799999999999999999976 446666
Q ss_pred ccc---CCeEEEEECCCCCEE------------EEEECCCeEEEEECCCCceeEEE-----ecCCCCEEEEEEcCCCCeE
Q psy10114 637 GHR---QEVCGLKWSPDNQYL------------ASGGNDNRLYVWNLHSMSPLQTY-----TEHLAAVKAIAWSPHHHGL 696 (819)
Q Consensus 637 gH~---~~VtsLafSpdg~~L------------aSGS~DGtI~IWDl~t~~~i~t~-----~~h~~~VtsLafSPdg~~L 696 (819)
+|. ..+++++|+|+|+++ ++|+.|++|++||..+++.+..+ .+|...+.+..++ +. +
T Consensus 221 g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~ 297 (356)
T 2w18_A 221 IDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DH-C 297 (356)
T ss_dssp CCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TT-E
T ss_pred CCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CC-E
Confidence 543 468888999999876 66888999999999999887665 3565555444444 44 5
Q ss_pred EEEEccCCCCeEEEEECCCCceeEEEc-CCCC-eEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 697 LASGGGTADRCIRFWNTLTGQPMQCVD-TGSQ-VCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 697 LaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~-V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
+++|+ .|++|++||+.+++++.++. +... +..++|+|||+.+++ |+.|++|++||+
T Consensus 298 lASgS--~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS--GS~D~TIklWd~ 355 (356)
T 2w18_A 298 AAAIL--TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA--GQKDGNIFVYHY 355 (356)
T ss_dssp EEEEE--TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE--ECTTSCEEEEEE
T ss_pred EEEEc--CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE--EECCCcEEEecC
Confidence 66665 89999999999999999986 4444 456899999999999 889999999995
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-21 Score=223.49 Aligned_cols=277 Identities=15% Similarity=0.164 Sum_probs=200.0
Q ss_pred EEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCC---CeEEEEEcCCCCEEEEEecC---------ceEEEeecC
Q psy10114 519 VDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGN---SVTSVAWNERGNLVAVGTHH---------GYVQVWDVS 585 (819)
Q Consensus 519 ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~---~VtsLafSpdG~~LAsGs~D---------GtI~IWDl~ 585 (819)
+.|+++ .+++.+.|+.|++||..+++...+. ..+.. .|.+++|||||++|++++.+ +.+.+||++
T Consensus 22 ~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~--~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLI--EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEE--CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred cEEcCCCcEEEEeCCCCEEEEECCCCcEEEEe--ccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC
Confidence 455532 2444478899999999999876543 34443 49999999999999999874 788999999
Q ss_pred CceEEEEEe---cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCC------------------e
Q psy10114 586 VAKQVHKLV---GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE------------------V 642 (819)
Q Consensus 586 tgk~i~tl~---gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~------------------V 642 (819)
+++. ..+. +|...+.+++| +|+.|+.++. +.|++||+.+++.. .....+... +
T Consensus 100 ~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 100 HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred CCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEeccCc
Confidence 8876 3343 34455888889 5778888876 79999999886632 223333332 3
Q ss_pred EEEEECCCCCEEEEEECCC----------------------------------eEEEEECCCCceeEEEecC------CC
Q psy10114 643 CGLKWSPDNQYLASGGNDN----------------------------------RLYVWNLHSMSPLQTYTEH------LA 682 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~DG----------------------------------tI~IWDl~t~~~i~t~~~h------~~ 682 (819)
.+++|||||+.|++++.|+ .|++||+.+++....+..+ ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 7899999999999987653 7999999988866666654 56
Q ss_pred CEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECCCCceeEEEc--CCCCe----EEEEEccCCCEEEEEEecCCC------
Q psy10114 683 AVKAIAWSPHHHGLLASGG-GTADRCIRFWNTLTGQPMQCVD--TGSQV----CNLAWSKHSSELVSTHGYSQN------ 749 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~tg~~v~~l~--~~s~V----~sLafSpdg~~LastsGssDg------ 749 (819)
.+.+++|+|||+.+++... +..+..|++||+.+++....+. +...+ ..++|+|||+.++.+++..++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 335 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence 7899999999996655432 2245789999999998766542 22333 378999999998876445566
Q ss_pred eEEEEE-CCCCcE--EEEEecCCCCEEE-EEEecCCCEEEEEeCC---CcEEEEECCCC
Q psy10114 750 QILVWK-YPTLTQ--VAKLTGHSYRVLY-LAMSPDGEAIVTGAGD---ETLRFWNVFSK 801 (819)
Q Consensus 750 ~I~IWD-l~s~k~--l~sl~gH~~~Vts-LafSpDG~~LaSGS~D---GtIrIWdl~s~ 801 (819)
.|.+|| ..+++. ...+..+...+.. ++|+|||+.|+..+.+ +.+++|++...
T Consensus 336 ~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 336 HITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 577777 344431 4445544445555 6999999999876655 78999998643
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-20 Score=217.73 Aligned_cols=278 Identities=13% Similarity=0.110 Sum_probs=203.8
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC-----ceE
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV-----AKQ 589 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t-----gk~ 589 (819)
.+..++|+++..++.+.++.|++||..+++...+. .+...+.+++|+|||+.||++ .|+.|.+||+.+ ++.
T Consensus 83 ~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYLF---DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCEEEEETTTTEEEEEETTEEEEEETTTTEEEEEE---CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred CceeEEECCCCeEEEEECCEEEEEECCCCceEEcc---CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 46677888765555557799999999998765533 345678899999999999995 679999999998 776
Q ss_pred EEEEecCCCC--------------eEEEEe--CCceeeecc---------------------------------CCCeEE
Q psy10114 590 VHKLVGHTAR--------------VGALAW--NGDMLSSGS---------------------------------RDRMIL 620 (819)
Q Consensus 590 i~tl~gHs~~--------------V~sLaw--ng~~LaSGS---------------------------------~DGtI~ 620 (819)
.+....+... +.+++| +|+.|++++ .++.|.
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 6554444443 478889 577888876 457899
Q ss_pred EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC-----eEEEEECCCCceeEEEe-c-CCC---CEEEEEEc
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN-----RLYVWNLHSMSPLQTYT-E-HLA---AVKAIAWS 690 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG-----tI~IWDl~t~~~i~t~~-~-h~~---~VtsLafS 690 (819)
+||+.+++...+.....|...+.+++|+|||+.|++++.|+ .|++||+.+++....+. . +.. .+.+++|+
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 99998865322222225667899999999999999988775 89999999984433332 2 222 24678999
Q ss_pred C--CCCeEEEEEccCCCCeEEEEECC-CCceeEEEcC-CCCeEE-EEEccCCCEEEEEEecCCC----eEEEEECCCCcE
Q psy10114 691 P--HHHGLLASGGGTADRCIRFWNTL-TGQPMQCVDT-GSQVCN-LAWSKHSSELVSTHGYSQN----QILVWKYPTLTQ 761 (819)
Q Consensus 691 P--dg~~LLaSGgGs~DgtIrIWDl~-tg~~v~~l~~-~s~V~s-LafSpdg~~LastsGssDg----~I~IWDl~s~k~ 761 (819)
| +|+. +++++ .|+.+++|++. ++..+..+.. ...+.+ ++|+|+|+.+++++ ..++ .|..||..+++
T Consensus 319 p~~dg~~-l~~~~--~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~-~~~~~~~~~l~~~d~~~~~- 393 (706)
T 2z3z_A 319 PGSNNQF-IWQSR--RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES-TEASPLERHFYCIDIKGGK- 393 (706)
T ss_dssp TTCSSEE-EEEEC--TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE-SSSCTTCBEEEEEETTCCC-
T ss_pred cCCCCEE-EEEEc--cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe-cCCCCceEEEEEEEcCCCC-
Confidence 9 9984 44544 68888888876 5666666643 445666 79999999988763 3444 77778877765
Q ss_pred EEEEecCCCCEEEEEEecCCCEEEEEeCC----CcEEEEECCCCc
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGD----ETLRFWNVFSKV 802 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~~LaSGS~D----GtIrIWdl~s~~ 802 (819)
...+ .|...+.+++|||||++++.++.+ +.|++||+.+++
T Consensus 394 ~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 394 TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3333 367779999999999998876443 569999998876
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-18 Score=185.82 Aligned_cols=267 Identities=10% Similarity=0.126 Sum_probs=191.5
Q ss_pred CCCeEEEEEc--CCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC----ceEEEeecCC--ce--EEEEEecCCCCe
Q psy10114 531 LGSCVYLWSA--CTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH----GYVQVWDVSV--AK--QVHKLVGHTARV 600 (819)
Q Consensus 531 ~Dg~V~LWd~--~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D----GtI~IWDl~t--gk--~i~tl~gHs~~V 600 (819)
.++.|++|+. .+++...+... +...+..++|+|||++|++++.+ |.|.+|+++. ++ .+.....+....
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 3567888865 56777666555 56778889999999999999886 7999998865 43 344445566677
Q ss_pred EEEEeCCceeeecc-CCCeEEEEECCCCCcc-ceEEEec-----------ccCCeEEEEECCCCCEEEEEE-CCCeEEEE
Q psy10114 601 GALAWNGDMLSSGS-RDRMILQRDVRTPNSQ-SERRLVG-----------HRQEVCGLKWSPDNQYLASGG-NDNRLYVW 666 (819)
Q Consensus 601 ~sLawng~~LaSGS-~DGtI~IWDi~t~~~~-~v~~l~g-----------H~~~VtsLafSpdg~~LaSGS-~DGtI~IW 666 (819)
..++++++.+++++ .++.|.+|++...... ....... +...+.+++|+|||+++++++ .++.|.+|
T Consensus 103 ~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 103 CYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 88888888666665 6889999999754321 1111111 123458899999999776655 47899999
Q ss_pred ECCCCce------e-------EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce--eEEEc----CCCC
Q psy10114 667 NLHSMSP------L-------QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP--MQCVD----TGSQ 727 (819)
Q Consensus 667 Dl~t~~~------i-------~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~--v~~l~----~~s~ 727 (819)
++..... + ............++|+|+|+.+++++. .++.|.+||+.+++. +..+. ....
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~ 260 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE--IGGTVIAFRYADGMLDEIQTVAADTVNAQG 260 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTCEEEEEEEETTEEEEEEEEESCSSCCCC
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC--CCCeEEEEEecCCceEEeEEEecCCCCCCC
Confidence 9875431 1 112234566789999999998888764 689999999987754 23332 2245
Q ss_pred eEEEEEccCCCEEEEEEecC-CCeEEEEECC--CCc--EEEEEecCCCCEEEEEEecCCCEEEEEe-CCCcEEEEECC--
Q psy10114 728 VCNLAWSKHSSELVSTHGYS-QNQILVWKYP--TLT--QVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRFWNVF-- 799 (819)
Q Consensus 728 V~sLafSpdg~~LastsGss-Dg~I~IWDl~--s~k--~l~sl~gH~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl~-- 799 (819)
...++|+|||++++++ ... ++.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|+++
T Consensus 261 ~~~i~~spdg~~l~v~-~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 261 SGDIHLSPDGKYLYAS-NRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp EEEEEECTTSSEEEEE-ECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred cccEEECCCCCEEEEE-CCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence 7899999999999774 334 6899999985 444 4555554 55688999999999988887 67899997665
Q ss_pred CCce
Q psy10114 800 SKVR 803 (819)
Q Consensus 800 s~~~ 803 (819)
+++.
T Consensus 339 ~g~~ 342 (361)
T 3scy_A 339 TGLL 342 (361)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 4443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-18 Score=183.72 Aligned_cols=242 Identities=12% Similarity=0.087 Sum_probs=193.1
Q ss_pred CCCeEEEEEcCCCCEEEEEec-------CceEEEeecCCceEEEEEecCCCCeEEEEe--CCc-eeeeccCCCeEEEEEC
Q psy10114 555 GNSVTSVAWNERGNLVAVGTH-------HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGD-MLSSGSRDRMILQRDV 624 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~-------DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~-~LaSGS~DGtI~IWDi 624 (819)
...+..++|+|+|+.+++++. ++.|.+||..+++.+..+... ..+.+++| +++ .++++..++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 356889999999999988874 578999999999988887643 34566777 566 4556667899999999
Q ss_pred CCCCccceEEEecccC---------CeEEEEECCCCCEEEEEE--CCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCC
Q psy10114 625 RTPNSQSERRLVGHRQ---------EVCGLKWSPDNQYLASGG--NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHH 693 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~---------~VtsLafSpdg~~LaSGS--~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg 693 (819)
.+++. ...+..+.. .+.+++|+|+++.+++++ .++.|.+||.++++.+..+..+...+.+++|+|++
T Consensus 119 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 119 KTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 88763 234443322 278899999999887776 47899999999999988887566668899999999
Q ss_pred CeEEEEEccCCCCeEEEEECCCCceeEEEcC-----CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC
Q psy10114 694 HGLLASGGGTADRCIRFWNTLTGQPMQCVDT-----GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768 (819)
Q Consensus 694 ~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-----~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH 768 (819)
+.++++. .++.|.+||..+++....+.. ...+..++|+|+++.++++ ...++.|.+||..+++.+..+...
T Consensus 197 ~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 197 KRLYTTN---ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT-DSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp TEEEEEC---TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE-ESSSSEEEEEETTTCCEEEEEECS
T ss_pred CEEEEEc---CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE-eCCCCEEEEEECCCCcEEEEEEcC
Confidence 9877764 589999999999998877754 3457889999999988775 456699999999999998888754
Q ss_pred CCCEEEEEEecCCCEEEEEe-CCCcEEEEECCCCceec
Q psy10114 769 SYRVLYLAMSPDGEAIVTGA-GDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 769 ~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl~s~~~~~ 805 (819)
.. .+++|+|||+++++++ .++.|.+||..+++...
T Consensus 273 ~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 273 ES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp SC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 42 5799999999766555 68999999998877544
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.9e-19 Score=184.48 Aligned_cols=258 Identities=14% Similarity=0.130 Sum_probs=182.5
Q ss_pred EEec--CCeEEEEECC-CeEEEEEcC--CCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-CceEEEeecC---CceE
Q psy10114 519 VDWS--SQNVLSVGLG-SCVYLWSAC--TSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVS---VAKQ 589 (819)
Q Consensus 519 ldwS--~~~LLa~g~D-g~V~LWd~~--tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~---tgk~ 589 (819)
+.|+ ++.+++++.+ +.|.+|++. +++...+..+..+. .+.+++|+|+|+.+++++. ++.|.+||+. +.+.
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 4454 5678888877 899999997 67766555555433 7899999999998877765 8899999994 4445
Q ss_pred EEEEecCCCCeEEEEeC--Cceeeecc-CCCeEEEEECCC-CCccceE--EEec-ccCCeEEEEECCCCCEEEEEE-CCC
Q psy10114 590 VHKLVGHTARVGALAWN--GDMLSSGS-RDRMILQRDVRT-PNSQSER--RLVG-HRQEVCGLKWSPDNQYLASGG-NDN 661 (819)
Q Consensus 590 i~tl~gHs~~V~sLawn--g~~LaSGS-~DGtI~IWDi~t-~~~~~v~--~l~g-H~~~VtsLafSpdg~~LaSGS-~DG 661 (819)
+..+..+ ..+.+++|+ ++.+++++ .++.|.+||+.+ ++..... .... ....+.+++|+|+++++++++ .++
T Consensus 122 ~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 122 VDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred cccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 5555543 457888884 66676666 899999999987 4322211 2222 345788999999999776555 789
Q ss_pred eEEEEECCC--Cce--eEEEec---C---CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC--C--CceeEEEcCCCC
Q psy10114 662 RLYVWNLHS--MSP--LQTYTE---H---LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL--T--GQPMQCVDTGSQ 727 (819)
Q Consensus 662 tI~IWDl~t--~~~--i~t~~~---h---~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~--t--g~~v~~l~~~s~ 727 (819)
.|.+||+.. ++. ...... . ...+.+++|+|+++.+++++. .++.|.+||+. + .+.+..+.....
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 278 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPTETQ 278 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEECSSS
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec--CCCEEEEEEEcCCCCceEEeeeecCCCc
Confidence 999999953 432 222321 1 235778999999998887765 78999999998 3 344555555556
Q ss_pred eEEEEEccCCCEEEEEEecCCCeEEEEEC--CCCc--EEEEEecCCCCEEEEEEecCCC
Q psy10114 728 VCNLAWSKHSSELVSTHGYSQNQILVWKY--PTLT--QVAKLTGHSYRVLYLAMSPDGE 782 (819)
Q Consensus 728 V~sLafSpdg~~LastsGssDg~I~IWDl--~s~k--~l~sl~gH~~~VtsLafSpDG~ 782 (819)
+..++|+|+|+.++++ +..++.|.+|++ .+++ .+..+... ....+++|.++.+
T Consensus 279 ~~~~~~s~dg~~l~~~-~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAA-GQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp CCCEEECTTSSEEEEE-CTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred cceEEECCCCCEEEEe-cCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence 8999999999998884 346899999954 4553 34445442 4466778877543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-19 Score=211.03 Aligned_cols=274 Identities=13% Similarity=0.170 Sum_probs=196.0
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCce--EEEEeccCC--------------CCCeEEEEEcCCCCEEEEEecCceEEEe
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQV--TRLCDLSAD--------------GNSVTSVAWNERGNLVAVGTHHGYVQVW 582 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~--~~l~~l~~h--------------~~~VtsLafSpdG~~LAsGs~DGtI~IW 582 (819)
+.|.++.+++.+.++ | +||..+++. ..+...... ...|.+++|+|| +.++.+. ++.|.+|
T Consensus 31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~ 106 (706)
T 2z3z_A 31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGF 106 (706)
T ss_dssp CEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEE
T ss_pred CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEE
Confidence 466677888888777 8 999999887 444332211 156999999999 6666654 5999999
Q ss_pred ecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC-----CCccceEEEecccCC--------------
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT-----PNSQSERRLVGHRQE-------------- 641 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t-----~~~~~v~~l~gH~~~-------------- 641 (819)
|+.+++... +..+...+.+++| +|+.|+++ .|+.|++||+.+ ++.. .....+...
T Consensus 107 d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ee~~~ 182 (706)
T 2z3z_A 107 DMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQREFGI 182 (706)
T ss_dssp ETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--ESCSCCBTTEEESSCCGGGCTTC
T ss_pred ECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--EeccCCCCCeEcccchhhhhcCC
Confidence 998886544 4556777888899 56788874 789999999987 5532 222222222
Q ss_pred eEEEEECCCCCEEEEEE---------------------------------CCCeEEEEECCCCceeEEEe--cCCCCEEE
Q psy10114 642 VCGLKWSPDNQYLASGG---------------------------------NDNRLYVWNLHSMSPLQTYT--EHLAAVKA 686 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS---------------------------------~DGtI~IWDl~t~~~i~t~~--~h~~~Vts 686 (819)
+.+++|||||++|++++ .++.|++||+.+++...... .+...+.+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 47899999999999987 44679999999887654432 46678999
Q ss_pred EEEcCCCCeEEEEEcc--CCCCeEEEEECCCCceeEEE---cCCC---CeEEEEEcc--CCCEEEEEEecCCCeEEEEEC
Q psy10114 687 IAWSPHHHGLLASGGG--TADRCIRFWNTLTGQPMQCV---DTGS---QVCNLAWSK--HSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 687 LafSPdg~~LLaSGgG--s~DgtIrIWDl~tg~~v~~l---~~~s---~V~sLafSp--dg~~LastsGssDg~I~IWDl 756 (819)
++|+|+|+.+++++.. ..+..|.+||+.+++....+ .... .+..++|+| +|+.+++ +..++.+++|++
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~--~~~~g~~~l~~~ 340 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ--SRRDGWNHLYLY 340 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE--ECTTSSCEEEEE
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEE--EccCCccEEEEE
Confidence 9999999988776530 11138999999998433333 1222 246789999 9997776 667888889887
Q ss_pred C-CCcEEEEEecCCCCEEE-EEEecCCCEEEEEeCC-C----cEEEEECCCCc
Q psy10114 757 P-TLTQVAKLTGHSYRVLY-LAMSPDGEAIVTGAGD-E----TLRFWNVFSKV 802 (819)
Q Consensus 757 ~-s~k~l~sl~gH~~~Vts-LafSpDG~~LaSGS~D-G----tIrIWdl~s~~ 802 (819)
. +++.+..+..+...+.+ ++|+|||+.|+.++.+ + .|..||+.+++
T Consensus 341 ~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 341 DTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp ETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 6 67778888888888887 8999999988765554 4 66777776654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-18 Score=183.72 Aligned_cols=273 Identities=10% Similarity=0.040 Sum_probs=190.7
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecCceEEEeecCCceEEEEEecCC----
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVGHT---- 597 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~gHs---- 597 (819)
+..+++++.++.|++||..+++......... ...+..++|+|+|+.+++ +..++.|.+||+.+++.+..+..+.
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSS-CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCC-CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 4467888899999999999998766544331 225789999999986654 4568999999999999888776432
Q ss_pred --CCeEEEEe--CCceeeeccCC------------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC
Q psy10114 598 --ARVGALAW--NGDMLSSGSRD------------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN 661 (819)
Q Consensus 598 --~~V~sLaw--ng~~LaSGS~D------------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG 661 (819)
..+.+++| +++.+++++.+ +.|.+||+.+++.........+...+.+++|+|||+ +++++.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~-- 166 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP-- 166 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--
Confidence 23667888 57788888765 899999998754322222233445688999999999 655544
Q ss_pred eEEEEECCCCceeEEEecCCC------------------------CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLA------------------------AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~------------------------~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
.|.+||..+++.+..+..+.. ....+++++++........ ....+..+|..+++
T Consensus 167 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD--LLYGYLSVDLKTGK 244 (349)
T ss_dssp SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE--EEEEEEEEETTTCC
T ss_pred cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc--cceeEEEEeccCCc
Confidence 499999999988777654320 3345666665422111100 01112224444443
Q ss_pred eeE--EEcCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 718 PMQ--CVDTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 718 ~v~--~l~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
... .-..+..+.+++|+| +++.+++ + ++.|.+||+.+++.+..+... ..+.+++|++||++|++++.++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~--~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYG--V--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA 319 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEE--E--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEE--E--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence 211 112456788999999 9999988 4 789999999999988877643 4577999999999998888899999
Q ss_pred EEECCCCceecc
Q psy10114 795 FWNVFSKVRSQR 806 (819)
Q Consensus 795 IWdl~s~~~~~k 806 (819)
+||+.+++....
T Consensus 320 v~d~~~~~~~~~ 331 (349)
T 1jmx_B 320 VFNPDTLEKVKN 331 (349)
T ss_dssp EEETTTTEEEEE
T ss_pred EEeccccceeee
Confidence 999998876544
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-19 Score=211.66 Aligned_cols=239 Identities=12% Similarity=0.120 Sum_probs=188.7
Q ss_pred CCCeEEEEEcCCCCEEEEEec-Cc-----eEEEeecCCceEEEEEecCCC------------------------CeEEEE
Q psy10114 555 GNSVTSVAWNERGNLVAVGTH-HG-----YVQVWDVSVAKQVHKLVGHTA------------------------RVGALA 604 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~-DG-----tI~IWDl~tgk~i~tl~gHs~------------------------~V~sLa 604 (819)
...+.+++|+|||++|++++. || .|.+||+++++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 999999999988777765543 277888
Q ss_pred e--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCC
Q psy10114 605 W--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLA 682 (819)
Q Consensus 605 w--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~ 682 (819)
| +|+.|++++. +.|.+||+.++.......+..|...+.+++|||||++|++++. +.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 9 5778888776 9999999988621012456677888999999999999999885 6999999998876654444433
Q ss_pred C----------------EEEEEEcCCCCeEEEEEccCCCC---------------------------------eEEEEEC
Q psy10114 683 A----------------VKAIAWSPHHHGLLASGGGTADR---------------------------------CIRFWNT 713 (819)
Q Consensus 683 ~----------------VtsLafSPdg~~LLaSGgGs~Dg---------------------------------tIrIWDl 713 (819)
. +.+++|+|||+.++++.. |+ .|.+||+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~---d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI---DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE---ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEE---cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 2 477999999998887653 22 7889999
Q ss_pred CC-CceeEEE---cCCCCeEEEEEccCCCEEEEEEe---cCCCeEEEEECCCCcEEEEEecCCC----CEEEEEEecCCC
Q psy10114 714 LT-GQPMQCV---DTGSQVCNLAWSKHSSELVSTHG---YSQNQILVWKYPTLTQVAKLTGHSY----RVLYLAMSPDGE 782 (819)
Q Consensus 714 ~t-g~~v~~l---~~~s~V~sLafSpdg~~LastsG---ssDg~I~IWDl~s~k~l~sl~gH~~----~VtsLafSpDG~ 782 (819)
.+ ++..... .+...+..++| |||+.+++... ..+..|.+||..+++....+..+.. .+.+++|+|||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe
Confidence 98 8765443 24456899999 99999998643 2356899999999988777766543 456899999999
Q ss_pred EEEEEeCCCcEEEEECC
Q psy10114 783 AIVTGAGDETLRFWNVF 799 (819)
Q Consensus 783 ~LaSGS~DGtIrIWdl~ 799 (819)
++++++.||.+++|.+.
T Consensus 350 ~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 350 ILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEEECTTSSCEEEEEC
T ss_pred EEEEecCCCccEEEEEc
Confidence 99999999988888775
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-18 Score=182.22 Aligned_cols=235 Identities=11% Similarity=0.134 Sum_probs=181.7
Q ss_pred EEcCCCCE-EEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeec-cCCCeEEEEECCCCCccceEEEec
Q psy10114 562 AWNERGNL-VAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSG-SRDRMILQRDVRTPNSQSERRLVG 637 (819)
Q Consensus 562 afSpdG~~-LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSG-S~DGtI~IWDi~t~~~~~v~~l~g 637 (819)
.|.++++. +++++.++.|.+||.++++.+..+..+...+ +++| +++.++++ ..++.|.+||..+++. ....+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEeccc
Confidence 45555554 6677788999999999999988888776667 8999 46655544 4589999999988763 1455555
Q ss_pred ccCCeEEEEECCCCCEEEEEECCC---eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe-EEEEEC
Q psy10114 638 HRQEVCGLKWSPDNQYLASGGNDN---RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC-IRFWNT 713 (819)
Q Consensus 638 H~~~VtsLafSpdg~~LaSGS~DG---tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt-IrIWDl 713 (819)
+.....+++|+|+|++++++..++ .|.+||+.+++.+..+..+ ....+++|+|+|+.+++++. .++. |.+|++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~--~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDR--SSANTVRRFKI 158 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEE--TTTTEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEec--CCCceEEEEEE
Confidence 655555599999999999655553 8999999999988877654 45689999999998888765 5577 999998
Q ss_pred CCCcee-----EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE---EEEEecCCCCEEEEEEecCCCEEE
Q psy10114 714 LTGQPM-----QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ---VAKLTGHSYRVLYLAMSPDGEAIV 785 (819)
Q Consensus 714 ~tg~~v-----~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~---l~sl~gH~~~VtsLafSpDG~~La 785 (819)
.....+ ..+..+.....++|+|+|+.++++ +..++.|.+||+.+++. +..+..+ ..+.+++|+|||++++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~-~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA-NLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVY 236 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE-ETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEE-eCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEE
Confidence 764432 333556778999999999987775 55789999999998888 7777754 5678999999999776
Q ss_pred EEe-CCCcEEEEECCCCce
Q psy10114 786 TGA-GDETLRFWNVFSKVR 803 (819)
Q Consensus 786 SGS-~DGtIrIWdl~s~~~ 803 (819)
+++ .++.|.+||+.+++.
T Consensus 237 v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECSSEEEEEEEETTTTEE
T ss_pred EEEcCCCEEEEEECCCCce
Confidence 654 578999999998776
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-19 Score=179.63 Aligned_cols=223 Identities=14% Similarity=0.212 Sum_probs=171.6
Q ss_pred EEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC-CCccceEEEecc-cCCeEEEEE
Q psy10114 572 VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT-PNSQSERRLVGH-RQEVCGLKW 647 (819)
Q Consensus 572 sGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t-~~~~~v~~l~gH-~~~VtsLaf 647 (819)
.++.|+.|++||+.+++.. .+..|...|.+++| +++++++++ ++.|.+||+.+ ++.. .....+ ...+.+++|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE--KVDTGFATICNNDHGI 92 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE--ECCCTTCCCBCSCCEE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce--EeccccccccccceEE
Confidence 3457899999999988766 45568899999999 567888876 78999999988 6532 333444 367889999
Q ss_pred CCCCCEEEEEEC--CC--eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC--CCCceeEE
Q psy10114 648 SPDNQYLASGGN--DN--RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT--LTGQPMQC 721 (819)
Q Consensus 648 Spdg~~LaSGS~--DG--tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl--~tg~~v~~ 721 (819)
+|+++.+++++. ++ .|..+|..+++ ...+..+ ..+..++|+|+++.++++++ .|+.+++|++ .+++....
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~--~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGI--RDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEE--ETTEEEEEEEETTTCCEEEC
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEEC--CCCceEEEEEECCCCcceEc
Confidence 999999999993 33 45555555554 3444433 34899999999998886665 6898899885 44555444
Q ss_pred EcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECC-CCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC----------
Q psy10114 722 VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP-TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD---------- 790 (819)
Q Consensus 722 l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~-s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D---------- 790 (819)
..+...+.+++|+|+++.++++ +..++.+.+|++. .+.....+..|...+.+++|+|||++|++++.|
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFN-SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEE-ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred ccCCCccccceECCCCCEEEEE-ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 4566789999999999988874 4457889999886 566777888888889999999999999988776
Q ss_pred -CcEEEEECCCCce
Q psy10114 791 -ETLRFWNVFSKVR 803 (819)
Q Consensus 791 -GtIrIWdl~s~~~ 803 (819)
+.|++||+.+++.
T Consensus 248 ~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 248 DVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEETTSCSC
T ss_pred ceEEEEEecCCCCc
Confidence 5699999988754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=202.82 Aligned_cols=280 Identities=10% Similarity=0.060 Sum_probs=196.3
Q ss_pred EEEEec--CCeEEEEECC---------CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC
Q psy10114 517 NLVDWS--SQNVLSVGLG---------SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS 585 (819)
Q Consensus 517 ~~ldwS--~~~LLa~g~D---------g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~ 585 (819)
..++|+ ++.+++++.+ +.+++||+.+++...+....++...+.+++|||||+.||.++. +.|.+||+.
T Consensus 64 ~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 64 IRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp SEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred ceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 344555 5678888764 7889999999987555444455556899999999999999886 799999999
Q ss_pred CceEEEEEecCCCCe------------------EEEEe--CCceeeeccCCC----------------------------
Q psy10114 586 VAKQVHKLVGHTARV------------------GALAW--NGDMLSSGSRDR---------------------------- 617 (819)
Q Consensus 586 tgk~i~tl~gHs~~V------------------~sLaw--ng~~LaSGS~DG---------------------------- 617 (819)
+++..+....+...+ .+++| +|+.|++++.|+
T Consensus 143 ~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 143 GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 988777666554433 78999 577888776542
Q ss_pred ------eEEEEECCCCCccceEEEecc------cCCeEEEEECCCCCEEEEEECC----CeEEEEECCCCceeEEEecC-
Q psy10114 618 ------MILQRDVRTPNSQSERRLVGH------RQEVCGLKWSPDNQYLASGGND----NRLYVWNLHSMSPLQTYTEH- 680 (819)
Q Consensus 618 ------tI~IWDi~t~~~~~v~~l~gH------~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~~~i~t~~~h- 680 (819)
.|++||+.+++. ...+..+ ...+..++|+|||+.+++.+.+ ..|++||+.+++....+..+
T Consensus 223 ~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 300 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTH--DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES 300 (723)
T ss_dssp SCCCEEEEEEEESSSSCC--CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCeeEEEEEECCCCce--eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc
Confidence 799999988653 2333333 5678999999999988777543 57999999999877665443
Q ss_pred CCCE----EEEEEcCCCCeEEEE-EccCCCC------eEEEEE-CCCCce--eEEEc-CCCCeEE-EEEccCCCEEEEEE
Q psy10114 681 LAAV----KAIAWSPHHHGLLAS-GGGTADR------CIRFWN-TLTGQP--MQCVD-TGSQVCN-LAWSKHSSELVSTH 744 (819)
Q Consensus 681 ~~~V----tsLafSPdg~~LLaS-GgGs~Dg------tIrIWD-l~tg~~--v~~l~-~~s~V~s-LafSpdg~~Lasts 744 (819)
...+ ..++|+|+|+.+++. +. .++ .|.+|| ..+++. ...+. ....+.. ++|+|||+.++.+
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~- 377 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFIRAI--PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFL- 377 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEEEEE--CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEE-
T ss_pred CCEEeccCCCceEcCCCCeEEEEEec--ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEE-
Confidence 3333 378999999988775 43 556 577788 344441 33443 2344554 6999999999875
Q ss_pred ecCC--CeEEEEECCCCc--EEEEEec---CCCCEEEEEEecCCCEEEEEeC-CC--cEEEEECCCCc
Q psy10114 745 GYSQ--NQILVWKYPTLT--QVAKLTG---HSYRVLYLAMSPDGEAIVTGAG-DE--TLRFWNVFSKV 802 (819)
Q Consensus 745 GssD--g~I~IWDl~s~k--~l~sl~g---H~~~VtsLafSpDG~~LaSGS~-DG--tIrIWdl~s~~ 802 (819)
+..+ +.+.+|++.... ....+.. |...+..++|+|||++++.... ++ ...+++..+++
T Consensus 378 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~ 445 (723)
T 1xfd_A 378 STEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKK 445 (723)
T ss_dssp ESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred EcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCC
Confidence 3344 788999986432 3334443 5677899999999998886543 22 23445554433
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-18 Score=189.92 Aligned_cols=278 Identities=11% Similarity=0.070 Sum_probs=188.2
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCC-----------ceEEE---EeccCCCCCeEEEEEcCCCCEEE----EEe
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTS-----------QVTRL---CDLSADGNSVTSVAWNERGNLVA----VGT 574 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg-----------~~~~l---~~l~~h~~~VtsLafSpdG~~LA----sGs 574 (819)
.++.++++ ++.+++++.++ +++|+.... ..... ..+ .+.+.|.+++|+++|++|| +|+
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccC
Confidence 34555555 55677777776 888875321 11100 011 2456799999999999999 788
Q ss_pred cCceEEEeecCCc--------e---EEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccC
Q psy10114 575 HHGYVQVWDVSVA--------K---QVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640 (819)
Q Consensus 575 ~DGtI~IWDl~tg--------k---~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~ 640 (819)
.||.|+|||+.++ + .+..+.+|...|.+++|+ ++.|++|+.||+|++||++++. ......+|..
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~~~ 193 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--KVCATLPSTV 193 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--EEEEEECGGG
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--ceeeccCCCC
Confidence 8999999998765 2 245567899999999994 5689999999999999999864 3455667899
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecC-------CCCEEEEEEcCCCCeEEEEEccCCC------Ce
Q psy10114 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEH-------LAAVKAIAWSPHHHGLLASGGGTAD------RC 707 (819)
Q Consensus 641 ~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h-------~~~VtsLafSPdg~~LLaSGgGs~D------gt 707 (819)
.|.+++|+|+|++|++|+.||+|++||.+ ++....+..| ...|.+++|++++..+++.+. .| ..
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~--~dg~~~~~~~ 270 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA--ADGTLETSPD 270 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE--TTCCSSSCCE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEcc--CCCccCCCCc
Confidence 99999999999999999999999999998 6666665543 238999999998876666554 33 34
Q ss_pred EEEEECCCCc-----eeEEE-cC-----C--CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC--cE-EEEEe-----
Q psy10114 708 IRFWNTLTGQ-----PMQCV-DT-----G--SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL--TQ-VAKLT----- 766 (819)
Q Consensus 708 IrIWDl~tg~-----~v~~l-~~-----~--s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~--k~-l~sl~----- 766 (819)
+++||+++.+ ....+ +. . .....+..-++.+.++++ ....+.|.+...... .. ...+.
T Consensus 271 v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~-s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra 349 (434)
T 2oit_A 271 VVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAA-SAASTEVSILARQSDQINWESWLLEDSSRA 349 (434)
T ss_dssp EEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEE-ETTCSBCEEEEECTTSSCEEEEEECGGGCC
T ss_pred eEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEe-cCCCCceeEEEecCCCCccEEEeccccccc
Confidence 9999998652 11221 11 1 112233344777777765 445555666654321 11 11111
Q ss_pred -------cCCCCEEEEEEec---------------CCCEEEEEeCCCcEEEEECCC
Q psy10114 767 -------GHSYRVLYLAMSP---------------DGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 767 -------gH~~~VtsLafSp---------------DG~~LaSGS~DGtIrIWdl~s 800 (819)
+.+....++++.- -...|..-+.||.+..|.+..
T Consensus 350 ~lP~~~~~~dt~piG~~~d~~~~~~v~~~~~~~~~p~P~l~~l~~~G~L~~~~~~~ 405 (434)
T 2oit_A 350 ELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMIN 405 (434)
T ss_dssp BCCBCTTSCBCCEEEEEEECCCCCCEEEETTEEECCCCEEEEEETTSEEEEEEEEE
T ss_pred cccCCCCCCCceeeEEEEEccCCceeecCccccCCCCCEEEEECCCCEEEEEEEEe
Confidence 1122234444421 124677889999999999875
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-18 Score=209.98 Aligned_cols=279 Identities=13% Similarity=0.097 Sum_probs=211.8
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccC-----------CCCCeEEEEEc-CCCCEEEEEecCceEEE
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSA-----------DGNSVTSVAWN-ERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~-----------h~~~VtsLafS-pdG~~LAsGs~DGtI~I 581 (819)
+....++.+++.++.+ .++.|++|+....++. .+.. +...+.+++|+ |||+.|++++ ++.|.+
T Consensus 247 ~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~---~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~ 321 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE---KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFI 321 (1045)
T ss_dssp SCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE---ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEE
T ss_pred cceeeEcCCCCEEEEE-eCCEEEEecCCceEee---eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEE
Confidence 3444566667777766 5899999999655443 3333 23468999999 9999999988 789999
Q ss_pred eecCCceEEEEEecCCC-CeEEEEeC-CceeeeccCCCeEE-EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE
Q psy10114 582 WDVSVAKQVHKLVGHTA-RVGALAWN-GDMLSSGSRDRMIL-QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG 658 (819)
Q Consensus 582 WDl~tgk~i~tl~gHs~-~V~sLawn-g~~LaSGS~DGtI~-IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS 658 (819)
|+..+++.. .+..|.. .+.+++|+ |+.+++++.++.+. +||+.+++. ..+.+|...+..++|+|||+.|++++
T Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~---~~l~~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 322 QDVSGTYVL-KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA---EKFEENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp ECTTSSBEE-ECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE---EECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred EcCCCCceE-EccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCc---eEecCCccceeeeEECCCCCEEEEEC
Confidence 999887654 4667777 89999995 55788888888898 999887552 33447888999999999999999999
Q ss_pred CCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc-------CCCCeEEEEECCCCceeEEEcCCCCeEEE
Q psy10114 659 NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCNL 731 (819)
Q Consensus 659 ~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG-------s~DgtIrIWDl~tg~~v~~l~~~s~V~sL 731 (819)
.++.|++||+.+++......+|.+.+.+++|+|+|+.+++++.. ..++.|++||+.+++......+...+..+
T Consensus 398 ~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~ 477 (1045)
T 1k32_A 398 DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAP 477 (1045)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEE
T ss_pred CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCc
Confidence 99999999999999888887899999999999999988776531 12369999999998844334556678899
Q ss_pred EEccCCCEEEEEEecCCCeEEEEECCCC-------------------------------------------cEEEEEecC
Q psy10114 732 AWSKHSSELVSTHGYSQNQILVWKYPTL-------------------------------------------TQVAKLTGH 768 (819)
Q Consensus 732 afSpdg~~LastsGssDg~I~IWDl~s~-------------------------------------------k~l~sl~gH 768 (819)
+|+|||+.+++. +.++....|+.... ..+..+..|
T Consensus 478 ~~spdG~~l~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~ 555 (1045)
T 1k32_A 478 AFDADSKNLYYL--SYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD 555 (1045)
T ss_dssp EECTTSCEEEEE--ESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC
T ss_pred eEcCCCCEEEEE--ecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCC
Confidence 999999999984 44444444442211 122344456
Q ss_pred CCCEEEEEEecCCCEEEE-------------EeCCCcEEEEECCCCce
Q psy10114 769 SYRVLYLAMSPDGEAIVT-------------GAGDETLRFWNVFSKVR 803 (819)
Q Consensus 769 ~~~VtsLafSpDG~~LaS-------------GS~DGtIrIWdl~s~~~ 803 (819)
.+.+..++++|||+++++ .+.+..|.+||+.+++.
T Consensus 556 ~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~ 603 (1045)
T 1k32_A 556 PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 603 (1045)
T ss_dssp CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE
T ss_pred CCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE
Confidence 778999999999987875 12355788888887764
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-17 Score=180.61 Aligned_cols=273 Identities=14% Similarity=0.103 Sum_probs=192.4
Q ss_pred cCCeEEEEEC-CC--eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC
Q psy10114 522 SSQNVLSVGL-GS--CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA 598 (819)
Q Consensus 522 S~~~LLa~g~-Dg--~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~ 598 (819)
+++.++.++. ++ .|++||..+++..++. .++...+.+++|+|||+.|+.++.++.|.+||+.+++.......+..
T Consensus 46 Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt--~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 46 DGSKLLFGGAFDGPWNYYLLDLNTQVATQLT--EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTCEEEECC--CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred CCCEEEEEEcCCCCceEEEEeCCCCceEEee--eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh
Confidence 4667888877 55 4899999998876543 33444455678999999999999999999999999988777777766
Q ss_pred CeEEEEe----CCceee----------------------eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-CC
Q psy10114 599 RVGALAW----NGDMLS----------------------SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-DN 651 (819)
Q Consensus 599 ~V~sLaw----ng~~La----------------------SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-dg 651 (819)
.+....| ++..++ ..+.++.|.+||+.+++. ..+..+...+..++|+| ||
T Consensus 124 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 124 WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES---TVILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE---EEEEEESSCEEEEEEETTEE
T ss_pred cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce---EEeecCCccccccEECCCCC
Confidence 6655544 455554 244568899999988653 44556677899999999 99
Q ss_pred CEEEEEECC------CeEEEEECCCCceeEEEecCC--CCEEEEEEcCCCCeEEEEEccC--CCCeEEEEECCCCceeEE
Q psy10114 652 QYLASGGND------NRLYVWNLHSMSPLQTYTEHL--AAVKAIAWSPHHHGLLASGGGT--ADRCIRFWNTLTGQPMQC 721 (819)
Q Consensus 652 ~~LaSGS~D------GtI~IWDl~t~~~i~t~~~h~--~~VtsLafSPdg~~LLaSGgGs--~DgtIrIWDl~tg~~v~~ 721 (819)
+.|+.++.+ ..|.++|...++. ..+..+. ..+..++|+|+|+.++..+... .+..|.+||+.+++....
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 999887764 3788888866543 4444444 3578899999999886655311 123499999999875432
Q ss_pred EcCCC------CeEEEEEccCCCEEEEEEe-------cCCCeEEEEECCCCcEEEEEecCCC-----------CEEEEEE
Q psy10114 722 VDTGS------QVCNLAWSKHSSELVSTHG-------YSQNQILVWKYPTLTQVAKLTGHSY-----------RVLYLAM 777 (819)
Q Consensus 722 l~~~s------~V~sLafSpdg~~LastsG-------ssDg~I~IWDl~s~k~l~sl~gH~~-----------~VtsLaf 777 (819)
..... .....+|+|||+.++.... ..+..|.+||..+++. ..+..+.. .+.+++|
T Consensus 280 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~ 358 (388)
T 3pe7_A 280 TSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSF 358 (388)
T ss_dssp EEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEE
T ss_pred EcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccC
Confidence 22111 0122379999998886421 4567899999988654 45666655 5788999
Q ss_pred ecCCCEEEEEe-CCCcEEEEECCCC
Q psy10114 778 SPDGEAIVTGA-GDETLRFWNVFSK 801 (819)
Q Consensus 778 SpDG~~LaSGS-~DGtIrIWdl~s~ 801 (819)
+|||+.|+.++ .+|...+|.+.-.
T Consensus 359 spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 359 TPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEECC
T ss_pred CCCCCEEEEEecCCCceeEEEEECC
Confidence 99999888665 4777777766533
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-17 Score=176.51 Aligned_cols=271 Identities=12% Similarity=0.048 Sum_probs=188.2
Q ss_pred EEEEECC--CeEEEEEc--CCCceEEEEecc-CCCCCeEEEEEcCCCCEEEEEecCceEEEeecC-CceEEEEEecC-CC
Q psy10114 526 VLSVGLG--SCVYLWSA--CTSQVTRLCDLS-ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS-VAKQVHKLVGH-TA 598 (819)
Q Consensus 526 LLa~g~D--g~V~LWd~--~tg~~~~l~~l~-~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~-tgk~i~tl~gH-s~ 598 (819)
++.++.. +.|++|+. .+++...+.... .....+..++|+|+|++|++++.+ .|.+||+. +++........ .+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4445543 56877764 567665544332 233468899999999999999888 89999997 77765433211 12
Q ss_pred CeEEEEe--CCce--eeecc-------------CCCeEEEEECCC-CCccceEEEe----cccCCeEEEEECCCCCEEEE
Q psy10114 599 RVGALAW--NGDM--LSSGS-------------RDRMILQRDVRT-PNSQSERRLV----GHRQEVCGLKWSPDNQYLAS 656 (819)
Q Consensus 599 ~V~sLaw--ng~~--LaSGS-------------~DGtI~IWDi~t-~~~~~v~~l~----gH~~~VtsLafSpdg~~LaS 656 (819)
...+++| +|+. +++++ .+|.+.+|++.. ++. ...+. .+...+.+++|+|||+++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL--EKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE--EEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC--cceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 3445677 4663 45554 689999999974 332 12222 24567999999999998887
Q ss_pred EEC-CCeEEEEECC-CCcee--EEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC--CCcee---EEEc--
Q psy10114 657 GGN-DNRLYVWNLH-SMSPL--QTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL--TGQPM---QCVD-- 723 (819)
Q Consensus 657 GS~-DGtI~IWDl~-t~~~i--~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~--tg~~v---~~l~-- 723 (819)
+.. ++.|.+||+. +++.. ..+. .+...+..++|+|+|+.+++++. .++.|.+|++. +|+.. ..+.
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC--CCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 764 6799999998 67643 3333 23567899999999998877754 57899999765 56542 2221
Q ss_pred -CC----C-------CeEEEE-EccCCCEEEEEEecCC----CeEEEEECC-CCcEEE---EEecCCCCEEEEEEec---
Q psy10114 724 -TG----S-------QVCNLA-WSKHSSELVSTHGYSQ----NQILVWKYP-TLTQVA---KLTGHSYRVLYLAMSP--- 779 (819)
Q Consensus 724 -~~----s-------~V~sLa-fSpdg~~LastsGssD----g~I~IWDl~-s~k~l~---sl~gH~~~VtsLafSp--- 779 (819)
.+ . .+..++ |+|||++++++....+ +.|.+|++. +++... ....+...+..++|+|
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~ 319 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW 319 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCc
Confidence 11 1 478999 9999999987543333 289999996 565443 2334555567899999
Q ss_pred CCCEEEEEeCC-CcEEEEECCCC
Q psy10114 780 DGEAIVTGAGD-ETLRFWNVFSK 801 (819)
Q Consensus 780 DG~~LaSGS~D-GtIrIWdl~s~ 801 (819)
||++|++++.+ +.|++|++...
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCEEEEEEcCCCeEEEEEEchh
Confidence 89999998865 89999999766
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-18 Score=197.28 Aligned_cols=263 Identities=13% Similarity=0.078 Sum_probs=188.6
Q ss_pred ceEEEEEecCCeEEEEEC-CCeEEEEEcCCCceEEEEeccCCC-CCeEEEEEcCCCCEEEEEec---CceEEEeecCC--
Q psy10114 514 FYLNLVDWSSQNVLSVGL-GSCVYLWSACTSQVTRLCDLSADG-NSVTSVAWNERGNLVAVGTH---HGYVQVWDVSV-- 586 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~-Dg~V~LWd~~tg~~~~l~~l~~h~-~~VtsLafSpdG~~LAsGs~---DGtI~IWDl~t-- 586 (819)
.+...++.+++.++.++. |+.+.||++.+++..+ +..+. ..+.+++|+|| +.+++++. +...++|.+..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~---lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK---LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE---CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe---eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 344455667888988877 9999999997776544 33344 68999999999 77777765 45556655432
Q ss_pred -ceEEEEEe-cCCCCeEEEEeCCc--eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC--
Q psy10114 587 -AKQVHKLV-GHTARVGALAWNGD--MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-- 660 (819)
Q Consensus 587 -gk~i~tl~-gHs~~V~sLawng~--~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-- 660 (819)
++.. .+. .+...+.+++++|+ .+++++.++ +.+||+.+++. ..+..+.. .+++|||||+.+++++.|
T Consensus 100 ~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~---~~l~~~~~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 100 PGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGL---RELARLPG--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEE---EEEEEESS--CEEEEEEETTEEEEEEEEET
T ss_pred CCccc-cccCCCCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcE---EEeecCCC--ceEEECCCCCEEEEEEEcCC
Confidence 3322 333 22333556666775 344444444 55999988653 23333333 789999999999988877
Q ss_pred --CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC--eEEEEECCCCceeEEEc-CCCCeEEEE---
Q psy10114 661 --NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR--CIRFWNTLTGQPMQCVD-TGSQVCNLA--- 732 (819)
Q Consensus 661 --GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg--tIrIWDl~tg~~v~~l~-~~s~V~sLa--- 732 (819)
+.|++||+.+++.. .+..|.+.+..++|+|||+.++ ++. .++ .|++||+.+++.. .+. +...+..++
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~-~~~--~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTA-GLE--TAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEE-EEE--CSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred CCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEE-Ecc--CCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 78999999888754 6778889999999999999887 433 577 8999999998877 432 334455566
Q ss_pred -----EccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCc---EEEEECCC
Q psy10114 733 -----WSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDET---LRFWNVFS 800 (819)
Q Consensus 733 -----fSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGt---IrIWdl~s 800 (819)
|+|||..+++ +..++.+++|++ ++... ...+.+.+++|+ ||+.+++++.+.+ +.+||..+
T Consensus 248 ~~~~~~spdg~~~~~--~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVV--ARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEECTTSCEEEE--EEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred ccceeEcCCCcEEEE--EEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 9999966565 668999999999 55443 345678999999 9999998888754 66666654
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-17 Score=205.58 Aligned_cols=269 Identities=13% Similarity=0.075 Sum_probs=207.5
Q ss_pred EEEEec---CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCC-CeEEEEEcCCCCEEEEEecCceEE-EeecCCceEEE
Q psy10114 517 NLVDWS---SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGN-SVTSVAWNERGNLVAVGTHHGYVQ-VWDVSVAKQVH 591 (819)
Q Consensus 517 ~~ldwS---~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~-~VtsLafSpdG~~LAsGs~DGtI~-IWDl~tgk~i~ 591 (819)
..+.|+ ++.+++++ ++.|++|+..+++... +..+.+ .+.+++|+ ||+.|++++.++.+. +||+.+++..
T Consensus 299 ~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~- 372 (1045)
T 1k32_A 299 FAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK---VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE- 372 (1045)
T ss_dssp GEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE---CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-
T ss_pred ceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE---ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-
Confidence 345555 44566666 8899999998887543 455666 89999999 999999999988898 9999877654
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC--------
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN-------- 661 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG-------- 661 (819)
.+.+|...+.+++| +|+.|++++.++.|++||+.+++. .....+|...+.+++|+|||++|++++.++
T Consensus 373 ~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~--~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~ 450 (1045)
T 1k32_A 373 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP--TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 450 (1045)
T ss_dssp ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce--EEeccCCCCCccceEECCCCCeEEEEecCccccccCCC
Confidence 34488889999999 577999999999999999988663 344557888999999999999999887654
Q ss_pred --eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc----------------------
Q psy10114 662 --RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ---------------------- 717 (819)
Q Consensus 662 --tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~---------------------- 717 (819)
.|++||+.+++ ...+..|...+.+++|+|+|+.+++.+ .++....|+.....
T Consensus 451 ~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (1045)
T 1k32_A 451 MQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLS---YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPT 526 (1045)
T ss_dssp EEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEE---SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGG
T ss_pred CCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEe---cccCCcCcchhccccccccCceeEEEEeCCCCCCcc
Confidence 89999999887 677778888899999999999887765 34444445432211
Q ss_pred ---------------------eeEEEc-CCCCeEEEEEccCCCEEEEE-----------EecCCCeEEEEECCCCcEEEE
Q psy10114 718 ---------------------PMQCVD-TGSQVCNLAWSKHSSELVST-----------HGYSQNQILVWKYPTLTQVAK 764 (819)
Q Consensus 718 ---------------------~v~~l~-~~s~V~sLafSpdg~~Last-----------sGssDg~I~IWDl~s~k~l~s 764 (819)
.+..+. +...+..++++|+|+.+++. .......|.+||..+++.. .
T Consensus 527 ~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~-~ 605 (1045)
T 1k32_A 527 KLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-E 605 (1045)
T ss_dssp GCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE-E
T ss_pred ccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE-E
Confidence 111221 33568899999999877751 1223557889999887753 3
Q ss_pred EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 765 l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+. ..+.+++|||||+.|++++.| .|++||+.+++
T Consensus 606 l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 606 VK---NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EE---EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred ee---cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 33 568899999999999999877 89999998876
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-17 Score=173.17 Aligned_cols=241 Identities=15% Similarity=0.136 Sum_probs=170.2
Q ss_pred EEecCC-eEEEEEC---CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCC-c--eEE
Q psy10114 519 VDWSSQ-NVLSVGL---GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSV-A--KQV 590 (819)
Q Consensus 519 ldwS~~-~LLa~g~---Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~t-g--k~i 590 (819)
+.|+++ .+++++. ++.|++|++.+++...+..+..+...+..++|+|+|++|++++ .++.|.+||+.. + +.+
T Consensus 45 ~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 45 LALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp EEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 344432 2666655 5899999998887666655555677889999999999998888 689999999963 2 334
Q ss_pred EEEec---------CCCCeEEEEe--CCceeeeccCCCeEEEEECC-CCCccceEEEecc-cCCeEEEEECCCCCEEEE-
Q psy10114 591 HKLVG---------HTARVGALAW--NGDMLSSGSRDRMILQRDVR-TPNSQSERRLVGH-RQEVCGLKWSPDNQYLAS- 656 (819)
Q Consensus 591 ~tl~g---------Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~-t~~~~~v~~l~gH-~~~VtsLafSpdg~~LaS- 656 (819)
..+.. +...+.+++| +++.++++..++.|.+||+. +++.........+ ...+..++|+|||+++++
T Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 125 DTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp EEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred ceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEE
Confidence 44432 1234888999 46667777788999999998 3332222222222 336788999999996665
Q ss_pred EECCCeEEEEECCC--Cce--eEEEecCC------CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC---ceeEEEc
Q psy10114 657 GGNDNRLYVWNLHS--MSP--LQTYTEHL------AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG---QPMQCVD 723 (819)
Q Consensus 657 GS~DGtI~IWDl~t--~~~--i~t~~~h~------~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg---~~v~~l~ 723 (819)
+..++.|.+|++.. ++. +..+.... ..+..++|+|+|+.+++++. .++.|.+||+... +.+..+.
T Consensus 205 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 205 GELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEEEeEEEe
Confidence 45688999999874 442 23333222 45889999999998877765 6899999999732 3444444
Q ss_pred C-CCCeEEEEEccCCCEEEEEEecCCCeEEEEEC--CCCcEE
Q psy10114 724 T-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKY--PTLTQV 762 (819)
Q Consensus 724 ~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl--~s~k~l 762 (819)
. +..+..++|+|+|+.++++ +..++.|.+|++ .+++..
T Consensus 283 ~~~~~~~~~~~spdg~~l~v~-~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 283 TEGDFPRDFDLDPTEAFVVVV-NQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CSSSCCCEEEECTTSSEEEEE-ETTTTEEEEEEECTTTCCEE
T ss_pred cCCCCcCeEEECCCCCEEEEE-EcCCCcEEEEEEeCCCCeEE
Confidence 4 5568999999999998885 445689999954 456554
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-17 Score=171.96 Aligned_cols=235 Identities=12% Similarity=0.078 Sum_probs=178.2
Q ss_pred cCCeEEEE-ECCCeEEEEEcCCCceEEEEeccC---CCCCeEEEEEcCCCCEEEEEe------------cCceEEEeecC
Q psy10114 522 SSQNVLSV-GLGSCVYLWSACTSQVTRLCDLSA---DGNSVTSVAWNERGNLVAVGT------------HHGYVQVWDVS 585 (819)
Q Consensus 522 S~~~LLa~-g~Dg~V~LWd~~tg~~~~l~~l~~---h~~~VtsLafSpdG~~LAsGs------------~DGtI~IWDl~ 585 (819)
+++.++++ +.++.|.+||..+++......... +...+.+++|+|+|+.+++++ .++.|.+||+.
T Consensus 44 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~ 123 (337)
T 1pby_B 44 GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123 (337)
T ss_dssp TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC
Confidence 44555444 456899999999998766544432 112577899999999999886 57999999999
Q ss_pred CceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC--
Q psy10114 586 VAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN-- 661 (819)
Q Consensus 586 tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG-- 661 (819)
+++.+..+.. ...+.+++| +++.++++ ++.|.+||+.+++. ...+..+.. ...+.|+|+++.++.++.++
T Consensus 124 ~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~--~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~ 197 (337)
T 1pby_B 124 TLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL--VEDKPIQSW-EAETYAQPDVLAVWNQHESSGV 197 (337)
T ss_dssp TTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE--EEEECSTTT-TTTTBCCCBCCCCCCCCTTTTE
T ss_pred CCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcE--eeeeecccc-CCCceeCCCccEEeeeccCCCc
Confidence 9988887765 445677888 46677777 68899999988653 233333320 11237899988765544332
Q ss_pred ----------------------eEEEEECCCCcee-EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 662 ----------------------RLYVWNLHSMSPL-QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 662 ----------------------tI~IWDl~t~~~i-~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
.|.+||.++++.. ..+..+...+.+++|+|+++.++++ ++.|.+||+.+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-----~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 198 MATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-----YNVLESFDLEKNAS 272 (337)
T ss_dssp EEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-----ESEEEEEETTTTEE
T ss_pred eeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-----CCeEEEEECCCCcC
Confidence 4689999988764 2334566778899999999987764 68999999999999
Q ss_pred eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC
Q psy10114 719 MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS 769 (819)
Q Consensus 719 v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~ 769 (819)
+..+..+..+.+++|+|+|+.+++ +..++.|.+||..+++.+..+..+.
T Consensus 273 ~~~~~~~~~~~~~~~s~dg~~l~~--~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 273 IKRVPLPHSYYSVNVSTDGSTVWL--GGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEE--ESBSSEEEEEETTTCCEEEEEECGG
T ss_pred cceecCCCceeeEEECCCCCEEEE--EcCCCcEEEEECcCCcEEEEEEcCC
Confidence 888887888999999999999988 4678999999999999988887553
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.8e-18 Score=195.81 Aligned_cols=234 Identities=12% Similarity=-0.011 Sum_probs=172.5
Q ss_pred CCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceEEEEEecCC-CCeEEEEeCCc-eeeeccC---CCeEEEEECCC--
Q psy10114 555 GNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGHT-ARVGALAWNGD-MLSSGSR---DRMILQRDVRT-- 626 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~i~tl~gHs-~~V~sLawng~-~LaSGS~---DGtI~IWDi~t-- 626 (819)
..+|.+++|+|||+.||+++. ||+++||++++++. +.+..|. ..+.+++|+++ .+++++. +....+|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccC
Confidence 357999999999999999887 99999999966655 4455555 68999999655 4454443 45556665543
Q ss_pred CCccceEEEecccCCeEEEEECCCCCE-EEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEcc-CC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQY-LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG-TA 704 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~-LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgG-s~ 704 (819)
.... ..+... ..+...+|+|||+. +++++.++.+.+||+.+++.......+ . .+++|+|||+.+++++.. ..
T Consensus 100 ~g~~--~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 100 PGEE--QRLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TTCC--EECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETT
T ss_pred CCcc--ccccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCC
Confidence 2211 122222 23446688888753 333344455569999988765544433 3 789999999988765531 11
Q ss_pred CCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCC--eEEEEECCCCcEEEEEecCCCCEEEEE------
Q psy10114 705 DRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN--QILVWKYPTLTQVAKLTGHSYRVLYLA------ 776 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg--~I~IWDl~s~k~l~sl~gH~~~VtsLa------ 776 (819)
.+.|++||+.+++......+...+..++|||||+.+++ +..++ .|.+||..+++.. .+.+|...+.+++
T Consensus 174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~--~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAG--LETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEE--EECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEE--ccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc
Confidence 27899999999887655566677899999999999995 55677 8999999998887 7778877777777
Q ss_pred --EecCCCEEEEEeCCCcEEEEEC
Q psy10114 777 --MSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 777 --fSpDG~~LaSGS~DGtIrIWdl 798 (819)
|+|||..+++++.||++++|++
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEET
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999999999999999999999
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=201.12 Aligned_cols=273 Identities=11% Similarity=0.146 Sum_probs=193.3
Q ss_pred EecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCC-CCCeEEEEEcCCCCEEEEEec---------CceEEEeecCCce
Q psy10114 520 DWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSAD-GNSVTSVAWNERGNLVAVGTH---------HGYVQVWDVSVAK 588 (819)
Q Consensus 520 dwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h-~~~VtsLafSpdG~~LAsGs~---------DGtI~IWDl~tgk 588 (819)
.|+++ .+++.+.|+.|++||..+++...+...... ...+.+++|||||++|++++. ++.|++||+++++
T Consensus 22 ~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~ 101 (719)
T 1z68_A 22 NWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE 101 (719)
T ss_dssp EESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred EECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc
Confidence 55533 566667899999999999987665432110 124889999999999999876 7899999999887
Q ss_pred EE--EEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCe-----------------EEEEE
Q psy10114 589 QV--HKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV-----------------CGLKW 647 (819)
Q Consensus 589 ~i--~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~V-----------------tsLaf 647 (819)
.+ ..+ ...+.+++| +|+.|++++ |+.|++||+.+++... ....++...| .+++|
T Consensus 102 ~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~-l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 102 FVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ-ITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp ECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred cccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE-EecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 62 222 356788899 577888875 7899999998765321 1112332222 48999
Q ss_pred CCCCCEEEEEECCC----------------------------------eEEEEECCCCcee--------EEEecCCCCEE
Q psy10114 648 SPDNQYLASGGNDN----------------------------------RLYVWNLHSMSPL--------QTYTEHLAAVK 685 (819)
Q Consensus 648 Spdg~~LaSGS~DG----------------------------------tI~IWDl~t~~~i--------~t~~~h~~~Vt 685 (819)
||||+.||+++.|. .|++||+.+++.. ..+.+|...+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99999999988653 7899999887653 11335778899
Q ss_pred EEEEcCCCCeEEEEEcc--CCCCeEEEEE----CCCCceeEEE-----cCCCCeE-----EEEEccCCCEEEEEEecCCC
Q psy10114 686 AIAWSPHHHGLLASGGG--TADRCIRFWN----TLTGQPMQCV-----DTGSQVC-----NLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 686 sLafSPdg~~LLaSGgG--s~DgtIrIWD----l~tg~~v~~l-----~~~s~V~-----sLafSpdg~~LastsGssDg 749 (819)
+++|+||++ ++++... .....|.+|| ..+++..... .+...+. .++|+|||+.++...+..++
T Consensus 257 ~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g 335 (719)
T 1z68_A 257 WLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG 335 (719)
T ss_dssp EEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred EeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC
Confidence 999999975 5544321 1224588999 8777654333 2344455 78999999987764444444
Q ss_pred --eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC-----CcEEEEECCC
Q psy10114 750 --QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD-----ETLRFWNVFS 800 (819)
Q Consensus 750 --~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D-----GtIrIWdl~s 800 (819)
.|.+||..+++ ...+..+...+..+.++ +|+.|+..+.+ +..++|.+..
T Consensus 336 ~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 336 YKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 67777877666 45566666778888888 88888776665 8899998764
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-17 Score=184.79 Aligned_cols=252 Identities=16% Similarity=0.195 Sum_probs=178.0
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----------eEEE-----EEecCC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA----------KQVH-----KLVGHT 597 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg----------k~i~-----tl~gHs 597 (819)
+.+++|+.... + ....++.+++++++.++++|+.|| +++|+.... ..+. ....+.
T Consensus 23 ~~vri~~~~~~-------~--~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (434)
T 2oit_A 23 KKVRIFDSPEE-------L--PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK 92 (434)
T ss_dssp CEEECSCCCSS-------C--CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS
T ss_pred eeEEecCCccc-------c--CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC
Confidence 56788765321 1 234678999999999999999998 888875321 0111 112356
Q ss_pred CCeEEEEe--CCceee----eccCCCeEEEEECCCC-----Cc----cceEEEecccCCeEEEEECCC-CCEEEEEECCC
Q psy10114 598 ARVGALAW--NGDMLS----SGSRDRMILQRDVRTP-----NS----QSERRLVGHRQEVCGLKWSPD-NQYLASGGNDN 661 (819)
Q Consensus 598 ~~V~sLaw--ng~~La----SGS~DGtI~IWDi~t~-----~~----~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DG 661 (819)
..|.+++| ++++|+ +|+.|+.|++||+++. +. .....+.+|...|.+++|+|+ +++|++++.||
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 78999999 467888 8999999999998754 11 113456679999999999997 88999999999
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC--------CCCeEEEEE
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--------GSQVCNLAW 733 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--------~s~V~sLaf 733 (819)
+|++||++++..+....+|...|.+++|+|+|+.+++.+ .||+|++||.+ ++....+.. ...+.+++|
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs---~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK---QNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE---TTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc---CCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 999999999877777778899999999999998766543 79999999998 555555421 126899999
Q ss_pred ccCCCEEEEEEecCCC------eEEEEECCCCc-----EEEEEe-------cCCCCEEEEEEecCCCEEEEEeC-CCcEE
Q psy10114 734 SKHSSELVSTHGYSQN------QILVWKYPTLT-----QVAKLT-------GHSYRVLYLAMSPDGEAIVTGAG-DETLR 794 (819)
Q Consensus 734 Spdg~~LastsGssDg------~I~IWDl~s~k-----~l~sl~-------gH~~~VtsLafSpDG~~LaSGS~-DGtIr 794 (819)
++++.++++... .+| .+++|++++.+ ....+. +...+-..+..-+|.+++++++. .+.|.
T Consensus 249 ~~~~~~l~~~~~-~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~ 327 (434)
T 2oit_A 249 IGTYVFAIVYAA-ADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVS 327 (434)
T ss_dssp EETTEEEEEEEE-TTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCE
T ss_pred ecCceEEEEEcc-CCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCcee
Confidence 999888776533 332 48999997542 112211 11122223334477777665544 44466
Q ss_pred EEECC
Q psy10114 795 FWNVF 799 (819)
Q Consensus 795 IWdl~ 799 (819)
+....
T Consensus 328 vl~~~ 332 (434)
T 2oit_A 328 ILARQ 332 (434)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-15 Score=164.43 Aligned_cols=254 Identities=13% Similarity=0.094 Sum_probs=176.5
Q ss_pred EecCCeEEEEECC----CeEEEEEcCC--CceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEE
Q psy10114 520 DWSSQNVLSVGLG----SCVYLWSACT--SQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 520 dwS~~~LLa~g~D----g~V~LWd~~t--g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~t 592 (819)
+.+++.+++++.+ +.|.+|++.. ++...+.....+......+++ +|++|++++ .++.|.+|++.....+..
T Consensus 58 spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~ 135 (361)
T 3scy_A 58 SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLP 135 (361)
T ss_dssp CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCS
T ss_pred CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcc
Confidence 3345678888775 7999998765 666666555555667888888 788877776 578999999975432211
Q ss_pred ------Eec--------CCCCeEEEEe--CCcee-eeccCCCeEEEEECCCCCc----c-c------eEEEecccCCeEE
Q psy10114 593 ------LVG--------HTARVGALAW--NGDML-SSGSRDRMILQRDVRTPNS----Q-S------ERRLVGHRQEVCG 644 (819)
Q Consensus 593 ------l~g--------Hs~~V~sLaw--ng~~L-aSGS~DGtI~IWDi~t~~~----~-~------v~~l~gH~~~Vts 644 (819)
..+ +...+.+++| +++.+ +++..++.|.+|++..... . . ......+...+..
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 215 (361)
T 3scy_A 136 ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRH 215 (361)
T ss_dssp CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEE
T ss_pred cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeE
Confidence 111 1234578899 46645 4555689999999886542 1 1 1122334556889
Q ss_pred EEECCCCCEEEEEE-CCCeEEEEECCCCce--eEEEe---cCCCCEEEEEEcCCCCeEEEEEccCC-CCeEEEEECC--C
Q psy10114 645 LKWSPDNQYLASGG-NDNRLYVWNLHSMSP--LQTYT---EHLAAVKAIAWSPHHHGLLASGGGTA-DRCIRFWNTL--T 715 (819)
Q Consensus 645 LafSpdg~~LaSGS-~DGtI~IWDl~t~~~--i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~-DgtIrIWDl~--t 715 (819)
++|+|||+++++++ .++.|.+||+.+++. +..+. .+.....+++|+|+|+.++++.. . ++.|.+|++. +
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIFKVDETN 293 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEEEECTTT
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC--CCCCEEEEEEEcCCC
Confidence 99999999888777 689999999987654 23332 23345789999999998877764 4 6899999985 4
Q ss_pred Cc--eeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEEC--CCCcEEEEE-ecCCCCEEEEEEe
Q psy10114 716 GQ--PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY--PTLTQVAKL-TGHSYRVLYLAMS 778 (819)
Q Consensus 716 g~--~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl--~s~k~l~sl-~gH~~~VtsLafS 778 (819)
++ .+..+..+..+..++|+|+|++++++ +..++.|.+|++ .+++..... ..+...+.|++|.
T Consensus 294 g~~~~~~~~~~g~~~~~~~~spdg~~l~~~-~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 294 GTLTKVGYQLTGIHPRNFIITPNGKYLLVA-CRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CCEEEEEEEECSSCCCEEEECTTSCEEEEE-ETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CcEEEeeEecCCCCCceEEECCCCCEEEEE-ECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 54 44455556678999999999998885 446789999655 466554332 1244578888886
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.4e-15 Score=160.41 Aligned_cols=241 Identities=16% Similarity=0.171 Sum_probs=188.6
Q ss_pred CCCeEEEEEcCCCCEEEEEecC------------------------ceEEEeecCCceEEEEEe-cCCCCeEEEEe--CC
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHH------------------------GYVQVWDVSVAKQVHKLV-GHTARVGALAW--NG 607 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~D------------------------GtI~IWDl~tgk~i~tl~-gHs~~V~sLaw--ng 607 (819)
-+.+.+++++++|+++++...+ +.|.+||.++++.+..+. ++-.....+++ +|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888777 479999999998877665 44567889999 46
Q ss_pred ceeeeccCCCeEEEEECCCCCccceEEE---------ecccCCeEEEEECC-CCCEEEEEE-CCCeEEEEECCCCceeEE
Q psy10114 608 DMLSSGSRDRMILQRDVRTPNSQSERRL---------VGHRQEVCGLKWSP-DNQYLASGG-NDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 608 ~~LaSGS~DGtI~IWDi~t~~~~~v~~l---------~gH~~~VtsLafSp-dg~~LaSGS-~DGtI~IWDl~t~~~i~t 676 (819)
+++++.+.++.|+.||..... ..+..+ .++.....+++++| +++.+++.+ .++.|++|| .+++.+..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 788888889999999986542 122333 23445789999999 788888886 689999999 56777776
Q ss_pred EecC----------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---CCCCeEEEEEccCCCEEEEE
Q psy10114 677 YTEH----------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---TGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 677 ~~~h----------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---~~s~V~sLafSpdg~~Last 743 (819)
+... -.....++++|++..++++.. .++.|++||..+|+.+..+. .+..+..++++| + .++..
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g-~~~~~ 256 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G-FLFAV 256 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T-EEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C-EEEEe
Confidence 6432 234889999999666777765 78999999999899888874 346788999999 3 33332
Q ss_pred E------ecCCCeEEEEECCCCcEEEEEe---cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 744 H------GYSQNQILVWKYPTLTQVAKLT---GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 744 s------GssDg~I~IWDl~s~k~l~sl~---gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
. ...+..|.+||..+++.+..+. ++...+.++++++||..+++...++.|++|++...
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 2 2345689999999999998874 67778999999999988888889999999998653
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-14 Score=148.15 Aligned_cols=235 Identities=13% Similarity=0.215 Sum_probs=175.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe------cCCCCeEEEEe-C--CceeeeccC-CCeEEEEE
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV------GHTARVGALAW-N--GDMLSSGSR-DRMILQRD 623 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~------gHs~~V~sLaw-n--g~~LaSGS~-DGtI~IWD 623 (819)
+-..+.+++++++|+++++.+.++.|.+||.+ ++.+..+. ++...+.++++ + +..+++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 44678999999999988888889999999987 66666664 24457889998 2 334444433 88999999
Q ss_pred CCCCCccceEEEe-cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEE
Q psy10114 624 VRTPNSQSERRLV-GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 624 i~t~~~~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSG 700 (819)
. +++ ....+. .+...+.+++++++|+.+++...++.|.+||. +++.+..+. .+...+.+++++++|. ++++.
T Consensus 107 ~-~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~ 181 (286)
T 1q7f_A 107 Q-YGQ--FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISD 181 (286)
T ss_dssp T-TSC--EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEE
T ss_pred C-CCc--EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEE
Confidence 4 333 223332 34457899999999998888788899999996 456666654 3445789999999987 55554
Q ss_pred ccCCCCeEEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEEEEecCCC-eEEEEECCCCcEEEEEecCCC--CEEE
Q psy10114 701 GGTADRCIRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVSTHGYSQN-QILVWKYPTLTQVAKLTGHSY--RVLY 774 (819)
Q Consensus 701 gGs~DgtIrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~LastsGssDg-~I~IWDl~s~k~l~sl~gH~~--~Vts 774 (819)
. .++.|++||. +++.+..+... ..+..++++++|+.+++ ...++ .|.+||. +++.+..+..+.. .+.+
T Consensus 182 ~--~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~--~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 182 N--RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIA--DNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp G--GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEE--ECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred C--CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEE--eCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 3 6899999997 45666666433 56899999999987776 44565 9999994 6777777765533 4789
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 775 LAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 775 LafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
++++++|+++++ +.|++|++|++...
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 999999987776 67999999998654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=188.33 Aligned_cols=280 Identities=11% Similarity=0.090 Sum_probs=191.4
Q ss_pred EEEec--CCeEEEEEC---------CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 518 LVDWS--SQNVLSVGL---------GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 518 ~ldwS--~~~LLa~g~---------Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
.++|+ ++.++.++. ++.|++||+.+++......+ ...+.+++|||||+.||.+. ++.|++||+.+
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 44555 567777765 68999999999875110122 25688999999999999986 78999999988
Q ss_pred ceEEEEE-ecCCCCe-----------------EEEEe--CCceeeeccCCC-----------------------------
Q psy10114 587 AKQVHKL-VGHTARV-----------------GALAW--NGDMLSSGSRDR----------------------------- 617 (819)
Q Consensus 587 gk~i~tl-~gHs~~V-----------------~sLaw--ng~~LaSGS~DG----------------------------- 617 (819)
++..+.. .++...| .+++| +|+.|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 8765433 2333322 47889 577888877542
Q ss_pred -----eEEEEECCCCCcc---ce---EEEecccCCeEEEEECCCCCEEEEEECC----CeEEEEE----CCCCceeEEE-
Q psy10114 618 -----MILQRDVRTPNSQ---SE---RRLVGHRQEVCGLKWSPDNQYLASGGND----NRLYVWN----LHSMSPLQTY- 677 (819)
Q Consensus 618 -----tI~IWDi~t~~~~---~v---~~l~gH~~~VtsLafSpdg~~LaSGS~D----GtI~IWD----l~t~~~i~t~- 677 (819)
.|++||+.+++.. .+ ..+.+|...+.+++|+||++.+++.... ..|.+|| ..+++....+
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~ 299 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE 299 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe
Confidence 7889999875521 11 1133577889999999998877775433 2488999 8777665444
Q ss_pred ---ecCCCCEE-----EEEEcCCCCeEEEE-EccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecC-
Q psy10114 678 ---TEHLAAVK-----AIAWSPHHHGLLAS-GGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYS- 747 (819)
Q Consensus 678 ---~~h~~~Vt-----sLafSPdg~~LLaS-GgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGss- 747 (819)
..|.+.+. .++|+|+|+.++.. +.......|.+||+.+++..........+..+.++ +++.++.++ ..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~-~~~ 377 (719)
T 1z68_A 300 HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSS-NEF 377 (719)
T ss_dssp EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEE-SCG
T ss_pred cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEE-ecC
Confidence 35666666 78999999977653 32222346888898877743322344557788877 888888753 23
Q ss_pred ---CCeEEEEECCC--Cc-EEEEEec----CCCCEEEEEEecCCCEEEE-EeCC--CcEEEEECCCCce
Q psy10114 748 ---QNQILVWKYPT--LT-QVAKLTG----HSYRVLYLAMSPDGEAIVT-GAGD--ETLRFWNVFSKVR 803 (819)
Q Consensus 748 ---Dg~I~IWDl~s--~k-~l~sl~g----H~~~VtsLafSpDG~~LaS-GS~D--GtIrIWdl~s~~~ 803 (819)
++...+|.+.. +. ....+.. |...+..++|++||++++. ++.+ ..+.+||+.+++.
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence 47788887653 32 2333332 5667889999999987764 4443 4788999877763
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-15 Score=161.78 Aligned_cols=261 Identities=14% Similarity=0.048 Sum_probs=179.2
Q ss_pred EEcCCCceEEEEeccCCCCCeEE-----EEEcCCCCEEEEEec-Cc--eEEEeecCCceEEEEEecCCCCeEEEEe--CC
Q psy10114 538 WSACTSQVTRLCDLSADGNSVTS-----VAWNERGNLVAVGTH-HG--YVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607 (819)
Q Consensus 538 Wd~~tg~~~~l~~l~~h~~~Vts-----LafSpdG~~LAsGs~-DG--tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng 607 (819)
++..++.... .+..+...... .+|+|||+.|+.++. +| .|.+||+++++......++...+.+++| ++
T Consensus 15 ~~~~~g~~~~--~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 15 QDASTGAQVT--RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp ECTTTCCEEE--ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred ecCCCCcceE--EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 4556665433 45555555555 889999999999887 67 4888899988887776677666655667 67
Q ss_pred ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEE--EECCCCCEEEEEE----------------------CCCeE
Q psy10114 608 DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL--KWSPDNQYLASGG----------------------NDNRL 663 (819)
Q Consensus 608 ~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsL--afSpdg~~LaSGS----------------------~DGtI 663 (819)
+.|+.++.++.|++||+.+++.. .....+...+... .++++++.++... .++.|
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEEN--VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEE--EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcce--eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 79999999999999999987643 3334444444333 3489999887532 34689
Q ss_pred EEEECCCCceeEEEecCCCCEEEEEEcC-CCCeEEEEEccCC---CCeEEEEECCCCceeEEEcCC--CCeEEEEEccCC
Q psy10114 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSP-HHHGLLASGGGTA---DRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHS 737 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~~VtsLafSP-dg~~LLaSGgGs~---DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg 737 (819)
.+||+.+++.. .+..+...+..++|+| +|+.++.+..+.. +..|.++|..+++........ ..+..++|+|||
T Consensus 171 ~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg 249 (388)
T 3pe7_A 171 MRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDG 249 (388)
T ss_dssp EEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTS
T ss_pred EEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCC
Confidence 99999988654 4445677899999999 9998877654211 347888888766543333333 247788999999
Q ss_pred CEEEEEEecCCC---eEEEEECCCCcEE--EEEecCCCC---EEEEEEecCCCEEEEE---------eCCCcEEEEECCC
Q psy10114 738 SELVSTHGYSQN---QILVWKYPTLTQV--AKLTGHSYR---VLYLAMSPDGEAIVTG---------AGDETLRFWNVFS 800 (819)
Q Consensus 738 ~~LastsGssDg---~I~IWDl~s~k~l--~sl~gH~~~---VtsLafSpDG~~LaSG---------S~DGtIrIWdl~s 800 (819)
+.++.++....+ .|.+||+.+++.. ..+.++... ....+|+|||+.|+.. ..+..|++||+.+
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 250 SALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp SCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred CEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 988765432222 4999999988743 333331100 1123799999988754 5567999999998
Q ss_pred Cce
Q psy10114 801 KVR 803 (819)
Q Consensus 801 ~~~ 803 (819)
++.
T Consensus 330 ~~~ 332 (388)
T 3pe7_A 330 GTQ 332 (388)
T ss_dssp TEE
T ss_pred Cce
Confidence 764
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-15 Score=162.01 Aligned_cols=267 Identities=13% Similarity=0.075 Sum_probs=180.6
Q ss_pred cCCeEEEEECC---CeEEEEEcCCCceEEEEeccCCCCC-eEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCC
Q psy10114 522 SSQNVLSVGLG---SCVYLWSACTSQVTRLCDLSADGNS-VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT 597 (819)
Q Consensus 522 S~~~LLa~g~D---g~V~LWd~~tg~~~~l~~l~~h~~~-VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs 597 (819)
+++.++.+... ..|++||..+++..++ ..+... ...+.|+|||+.|+.++.++.|.+||+.+++.......+.
T Consensus 46 dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l---~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~ 122 (396)
T 3c5m_A 46 DGKKLLFAGDFDGNRNYYLLNLETQQAVQL---TEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE 122 (396)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTTEEEEC---CCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT
T ss_pred CCCEEEEEEecCCCceEEEEECCCCcEEEe---ecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc
Confidence 45666666543 4789999988876543 222233 2347899999999999999999999999887766665454
Q ss_pred CCeEE---E----------------Ee--CCceeeec-----cCCCeEEEEECCCCCccceEEEecccCCeEEEEECC-C
Q psy10114 598 ARVGA---L----------------AW--NGDMLSSG-----SRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP-D 650 (819)
Q Consensus 598 ~~V~s---L----------------aw--ng~~LaSG-----S~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp-d 650 (819)
..... + .| +++.++.+ ..+..|.+||+.+++. ..+..+...+..+.|+| +
T Consensus 123 ~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~---~~~~~~~~~~~~~~~sp~d 199 (396)
T 3c5m_A 123 EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL---EVIHQDTAWLGHPIYRPFD 199 (396)
T ss_dssp TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE---EEEEEESSCEEEEEEETTE
T ss_pred ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE---EeeccCCcccccceECCCC
Confidence 42222 2 22 34444433 4677899999988653 33345677899999999 7
Q ss_pred CCEEEEEECC------CeEEEEECCCCceeEEEecC--CCCEEEEEEcCCCCeEEEEEcc--CCCCeEEEEECCCCceeE
Q psy10114 651 NQYLASGGND------NRLYVWNLHSMSPLQTYTEH--LAAVKAIAWSPHHHGLLASGGG--TADRCIRFWNTLTGQPMQ 720 (819)
Q Consensus 651 g~~LaSGS~D------GtI~IWDl~t~~~i~t~~~h--~~~VtsLafSPdg~~LLaSGgG--s~DgtIrIWDl~tg~~v~ 720 (819)
++.++.++.+ ..|.+||...++.. .+..+ ...+..++|+|+|+.+++++.. ..++.|.+||+.+++...
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (396)
T 3c5m_A 200 DSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE 278 (396)
T ss_dssp EEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE
Confidence 8878776654 36889998765533 33333 2357889999999987776431 122559999999887654
Q ss_pred EEcCCCCeEEEEEcc-CCCEEEEEEe--------------cCCCeEEEEECCCCcEEEEEecCCC-----------CEEE
Q psy10114 721 CVDTGSQVCNLAWSK-HSSELVSTHG--------------YSQNQILVWKYPTLTQVAKLTGHSY-----------RVLY 774 (819)
Q Consensus 721 ~l~~~s~V~sLafSp-dg~~LastsG--------------ssDg~I~IWDl~s~k~l~sl~gH~~-----------~Vts 774 (819)
..... ... +.|+| +|+.+++..+ ..++.|.+||..+++. ..+..+.. .+..
T Consensus 279 l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 355 (396)
T 3c5m_A 279 VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPH 355 (396)
T ss_dssp EEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCC
T ss_pred eeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCC
Confidence 33322 233 89999 9998776321 1347899999987764 34554544 2567
Q ss_pred EEEecCCCEEEEEeC-CCcEEEEEC
Q psy10114 775 LAMSPDGEAIVTGAG-DETLRFWNV 798 (819)
Q Consensus 775 LafSpDG~~LaSGS~-DGtIrIWdl 798 (819)
++|+|||+.|+.++. ++...+|.+
T Consensus 356 ~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 356 PSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp CEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ceEccCCCeEEEEecCCCCceEEEE
Confidence 899999998887765 555555554
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=9e-16 Score=183.05 Aligned_cols=243 Identities=13% Similarity=0.115 Sum_probs=174.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCC-----eEEEEe--CCceeeeccCC---------CeE
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR-----VGALAW--NGDMLSSGSRD---------RMI 619 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~-----V~sLaw--ng~~LaSGS~D---------GtI 619 (819)
....+++|+|||++++++ ||.|++||+.++++...+.+|... ..+++| +|+.|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345689999999988886 899999999999988888877643 223566 67788888876 567
Q ss_pred EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE-EecCCCCE--------------
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT-YTEHLAAV-------------- 684 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t-~~~h~~~V-------------- 684 (819)
.+||+.+++. ..+..|...+...+|||||+.||.+. |+.|++||..+++..+. ..++...+
T Consensus 95 ~~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 95 DIYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 7999998763 34566778899999999999999985 68999999988775432 12222222
Q ss_pred ---EEEEEcCCCCeEEEEEc-------------------------------cC--CCCeEEEEECCC---Cc--eeEEEc
Q psy10114 685 ---KAIAWSPHHHGLLASGG-------------------------------GT--ADRCIRFWNTLT---GQ--PMQCVD 723 (819)
Q Consensus 685 ---tsLafSPdg~~LLaSGg-------------------------------Gs--~DgtIrIWDl~t---g~--~v~~l~ 723 (819)
.++.|||||+.++.... |. .+.+|++||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 35899999998877641 00 012688999998 73 223332
Q ss_pred -------CCCCeEEEEEccCCCEEEEEEecC--CCeEEEEECCCCc----E--EEEE--ecCCCCEE-----EEEEecCC
Q psy10114 724 -------TGSQVCNLAWSKHSSELVSTHGYS--QNQILVWKYPTLT----Q--VAKL--TGHSYRVL-----YLAMSPDG 781 (819)
Q Consensus 724 -------~~s~V~sLafSpdg~~LastsGss--Dg~I~IWDl~s~k----~--l~sl--~gH~~~Vt-----sLafSpDG 781 (819)
+...+..++|+|||+.++...... +..|.+||..+++ + +..+ .+|...|. ..+|+|||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 445689999999999776643322 3479999998876 1 1222 45665554 78999999
Q ss_pred CEEE-EEeC-C--CcEEEEECCCCcee
Q psy10114 782 EAIV-TGAG-D--ETLRFWNVFSKVRS 804 (819)
Q Consensus 782 ~~La-SGS~-D--GtIrIWdl~s~~~~ 804 (819)
+.++ ..+. + ..|++||+.+++..
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSCE
T ss_pred CEEEEEEEcCCCceEEEEEECCCCceE
Confidence 9877 6654 3 46888898876543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.67 E-value=4e-15 Score=156.92 Aligned_cols=234 Identities=15% Similarity=0.056 Sum_probs=160.8
Q ss_pred EEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCC-CCeEEEEe--CCce-eeeccCCCeEEEEECCCCCccceEEE
Q psy10114 560 SVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT-ARVGALAW--NGDM-LSSGSRDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 560 sLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs-~~V~sLaw--ng~~-LaSGS~DGtI~IWDi~t~~~~~v~~l 635 (819)
.+++++++.++++++.++.|.+||..+++.+..+..+. ..+..++| +++. +++++.++.|.+||+.+++. ...+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~--~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN--TFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE--EEEE
Confidence 45678889999999999999999999999988887543 25677888 4554 45667789999999987653 2333
Q ss_pred ec-c-----cCCeEEEEECCCCCEEEEEECC------------CeEEEEECCCCc---eeEEEecCCCCEEEEEEcCCCC
Q psy10114 636 VG-H-----RQEVCGLKWSPDNQYLASGGND------------NRLYVWNLHSMS---PLQTYTEHLAAVKAIAWSPHHH 694 (819)
Q Consensus 636 ~g-H-----~~~VtsLafSpdg~~LaSGS~D------------GtI~IWDl~t~~---~i~t~~~h~~~VtsLafSPdg~ 694 (819)
.. + ...+.+++|+|||+++++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc
Confidence 32 2 2337889999999999998865 899999998854 334444 344688999999999
Q ss_pred eEEEEEccCCCCeEEEEECCCCceeEEEcCCC-------------------------CeEEEEEccCCCEEEEEEecCCC
Q psy10114 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS-------------------------QVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 695 ~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s-------------------------~V~sLafSpdg~~LastsGssDg 749 (819)
+++.+ +.|.+||..+++.+..+..+. ....+++++++...... .....
T Consensus 161 -l~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~ 233 (349)
T 1jmx_B 161 -LYVAG-----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-ADLLY 233 (349)
T ss_dssp -EEEES-----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC-CEEEE
T ss_pred -EEEcc-----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc-cccce
Confidence 66632 339999999999887775432 33456666554221110 00011
Q ss_pred eEEEEECCCCcE-EEEEecCCCCEEEEEEec-CCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 750 QILVWKYPTLTQ-VAKLTGHSYRVLYLAMSP-DGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 750 ~I~IWDl~s~k~-l~sl~gH~~~VtsLafSp-DG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
.+..+|..+++. ...+..+...+.+++|+| ||++++++ ++.|.+||+.+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred eEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence 122244443332 122234566789999999 99999988 8899999999877543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.67 E-value=6.5e-15 Score=171.61 Aligned_cols=277 Identities=11% Similarity=0.005 Sum_probs=186.3
Q ss_pred eEEEEEecCCeEEEEEC----CCeEEEEEcCCCceEEEEeccCCCCCeE---------EEEEc--CCCCE-EEEEec-Cc
Q psy10114 515 YLNLVDWSSQNVLSVGL----GSCVYLWSACTSQVTRLCDLSADGNSVT---------SVAWN--ERGNL-VAVGTH-HG 577 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~----Dg~V~LWd~~tg~~~~l~~l~~h~~~Vt---------sLafS--pdG~~-LAsGs~-DG 577 (819)
.+..+.++++.++.+.. ++...||....+...+ .+..+...+. +..|+ |||+. |+.++. ++
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEE--SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEE--ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcc--eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence 45566777876554443 6788999854333222 3444555555 56665 99998 776654 56
Q ss_pred eEEEeecC--CceEEEEEec-----CCCCeEEEEe--CCceeeeccCC----------CeEEEEECCC------CCccce
Q psy10114 578 YVQVWDVS--VAKQVHKLVG-----HTARVGALAW--NGDMLSSGSRD----------RMILQRDVRT------PNSQSE 632 (819)
Q Consensus 578 tI~IWDl~--tgk~i~tl~g-----Hs~~V~sLaw--ng~~LaSGS~D----------GtI~IWDi~t------~~~~~v 632 (819)
.|.++++. .......+.. |...+.+++| +|+.|++++.| ..|++||+.+ ++ .
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~ 179 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---V 179 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---S
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---e
Confidence 67777765 2034555655 6778889999 57788888876 5899999987 33 2
Q ss_pred EEEe-cccCCeEEEEECCCCCEEEEEECC--------CeEEEEECC-CC---ceeEEEecCCCCEEEEEEcCCCCeEEEE
Q psy10114 633 RRLV-GHRQEVCGLKWSPDNQYLASGGND--------NRLYVWNLH-SM---SPLQTYTEHLAAVKAIAWSPHHHGLLAS 699 (819)
Q Consensus 633 ~~l~-gH~~~VtsLafSpdg~~LaSGS~D--------GtI~IWDl~-t~---~~i~t~~~h~~~VtsLafSPdg~~LLaS 699 (819)
..+. .+...+..++|||||++|+.++.+ ..|++||+. ++ +......++...+..++|+|+|+ ++++
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 3444 556778889999999999988755 379999998 56 44444445578899999999999 6666
Q ss_pred EccCCCC--eEEEEECCCCceeEEEcCCCC---------eEEEEEccCCCEEEEEEecCCCeEEEE--ECCCCcEEEEEe
Q psy10114 700 GGGTADR--CIRFWNTLTGQPMQCVDTGSQ---------VCNLAWSKHSSELVSTHGYSQNQILVW--KYPTLTQVAKLT 766 (819)
Q Consensus 700 GgGs~Dg--tIrIWDl~tg~~v~~l~~~s~---------V~sLafSpdg~~LastsGssDg~I~IW--Dl~s~k~l~sl~ 766 (819)
+. .++ .|..||..+++.......... +..++|+++++.+++ +.. +.+++| |..+++ +..+.
T Consensus 259 ~~--~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~--~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 259 TD--RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV--HGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EC--TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE--EBS-SSCEEEEEETTTTE-EEECC
T ss_pred EC--CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE--EEc-CccEEEEEECCCCc-EEEec
Confidence 54 566 777778777765443332211 467889999998887 555 777888 555444 67788
Q ss_pred cCCCCEEEE-EEecCCCEEEEEeCCCc--EEEEECCCCce
Q psy10114 767 GHSYRVLYL-AMSPDGEAIVTGAGDET--LRFWNVFSKVR 803 (819)
Q Consensus 767 gH~~~VtsL-afSpDG~~LaSGS~DGt--IrIWdl~s~~~ 803 (819)
.|...+..+ +++.+.-.+++++.+.. |..+|+.+++.
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 887778777 55443334445555544 55556666653
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.7e-14 Score=149.39 Aligned_cols=253 Identities=9% Similarity=0.082 Sum_probs=173.1
Q ss_pred EEEEecCCeEEEEE---------CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---c--eEEEe
Q psy10114 517 NLVDWSSQNVLSVG---------LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---G--YVQVW 582 (819)
Q Consensus 517 ~~ldwS~~~LLa~g---------~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---G--tI~IW 582 (819)
....++++.++... .++.|++||..+++...+ ..+.+++|+|||+.||.++.+ + .|.+|
T Consensus 18 ~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 18 SDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-------ENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp EEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred ccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-------ccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 33344677665542 256799999999876544 457899999999999987754 3 47788
Q ss_pred ecCCceEEEEEecCCCCeEEEEe--CCceeeeccC---------------------------CCeEEEEECCCCCccceE
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR---------------------------DRMILQRDVRTPNSQSER 633 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~---------------------------DGtI~IWDi~t~~~~~v~ 633 (819)
|+.+++.......+ . +.+++| +|+.|+.++. ...|.+||+.+++. ..
T Consensus 91 ~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~ 166 (347)
T 2gop_A 91 DLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IE 166 (347)
T ss_dssp ETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EE
T ss_pred ECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--Ee
Confidence 88887766555443 3 899999 5667776653 25789999987653 12
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCC---------eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccC-
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDN---------RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGT- 703 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DG---------tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs- 703 (819)
.+.. . .+..++|+||| .+++++.++ .|.++| +++ ...+..+ ..+..+ +|+|+.+++.+...
T Consensus 167 ~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 167 EFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEK 237 (347)
T ss_dssp EEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSS
T ss_pred eecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--CCCCCEEEEEEcccc
Confidence 3333 3 78899999999 777776542 355555 444 3444444 555554 99999887776311
Q ss_pred ----CCCeEEEEECCCCceeEEEc-CCCCeEE-EEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 704 ----ADRCIRFWNTLTGQPMQCVD-TGSQVCN-LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 704 ----~DgtIrIWDl~tg~~v~~l~-~~s~V~s-LafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
....|.+|| +++...... +...+.. +.|+ ++ .+++ +..++.+++| +.+++. ..+..+.+.|.+++|
T Consensus 238 ~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~--~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~ 309 (347)
T 2gop_A 238 KYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFT--LFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDV 309 (347)
T ss_dssp SCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEE--EEETTEEEEE-EESSSE-EEEECSSSEEEEEEE
T ss_pred CCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEE--EecCCcEEEE-EcCCce-EEEecCCCeEEeeee
Confidence 135788888 555433332 2455776 8999 87 5555 6678899999 876655 445556788999999
Q ss_pred ecCCCEEEEEeCCCcE-EEEECC
Q psy10114 778 SPDGEAIVTGAGDETL-RFWNVF 799 (819)
Q Consensus 778 SpDG~~LaSGS~DGtI-rIWdl~ 799 (819)
++ ..+++++.++.. ++|.+.
T Consensus 310 s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 310 DE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SS--SEEEEEECSSSCCEEEEES
T ss_pred eC--cEEEEEcCCCChHHheEeC
Confidence 99 677888877765 788776
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-14 Score=157.25 Aligned_cols=237 Identities=10% Similarity=0.093 Sum_probs=164.3
Q ss_pred EEecCCeEEEEECCCeEEEEEcC-CCceEEEEeccCCCCCeEEEEEcCCCCE--EEEEe-------------cCceEEEe
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSAC-TSQVTRLCDLSADGNSVTSVAWNERGNL--VAVGT-------------HHGYVQVW 582 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~-tg~~~~l~~l~~h~~~VtsLafSpdG~~--LAsGs-------------~DGtI~IW 582 (819)
++.+++.+++++.+ .|.+|+.. +++...+.....+ +.+.+++|+|+|++ ++++. .+|.+.+|
T Consensus 47 ~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~ 124 (365)
T 1jof_A 47 FDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVF 124 (365)
T ss_dssp ECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEE
T ss_pred ECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEE
Confidence 33445668888877 99999997 7776554333222 23567899999994 45553 68999999
Q ss_pred ecC-CceEEEEEe----cCCCCeEEEEe--CCceeeecc-CCCeEEEEECC-CCCccceEEEe--cccCCeEEEEECCCC
Q psy10114 583 DVS-VAKQVHKLV----GHTARVGALAW--NGDMLSSGS-RDRMILQRDVR-TPNSQSERRLV--GHRQEVCGLKWSPDN 651 (819)
Q Consensus 583 Dl~-tgk~i~tl~----gHs~~V~sLaw--ng~~LaSGS-~DGtI~IWDi~-t~~~~~v~~l~--gH~~~VtsLafSpdg 651 (819)
++. +++....+. .+...+.+++| +|+++++++ .++.|.+||+. +++......+. .|...+..++|+|||
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 125 SVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp EECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS
T ss_pred ccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC
Confidence 997 466554443 35678999999 466676654 46899999998 55432223333 245679999999999
Q ss_pred CEEEEEEC-CCeEEEEECC--CCcee---EEEec-------CCC------CEEEEE-EcCCCCeEEEEEccCCC----Ce
Q psy10114 652 QYLASGGN-DNRLYVWNLH--SMSPL---QTYTE-------HLA------AVKAIA-WSPHHHGLLASGGGTAD----RC 707 (819)
Q Consensus 652 ~~LaSGS~-DGtI~IWDl~--t~~~i---~t~~~-------h~~------~VtsLa-fSPdg~~LLaSGgGs~D----gt 707 (819)
+++++++. ++.|.+|+.. +++.. ..+.. +.. .+..++ |+|+|+.++++..+ .+ +.
T Consensus 205 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~-~~~~~~~~ 283 (365)
T 1jof_A 205 NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA-NKFELQGY 283 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE-SSTTSCCE
T ss_pred CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC-CCCCCCCe
Confidence 99988775 6899999865 45542 22221 121 588999 99999988776532 22 28
Q ss_pred EEEEECC-CCceeE---EEc-CCCCeEEEEEcc---CCCEEEEEEecCCCeEEEEECCCC
Q psy10114 708 IRFWNTL-TGQPMQ---CVD-TGSQVCNLAWSK---HSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 708 IrIWDl~-tg~~v~---~l~-~~s~V~sLafSp---dg~~LastsGssDg~I~IWDl~s~ 759 (819)
|.+|++. +++... ... ....+..++|+| +|++++++ +..++.|.+|++...
T Consensus 284 i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~-~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 284 IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT-DDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE-CSSSCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE-EcCCCeEEEEEEchh
Confidence 9999996 566543 232 345577899999 89999884 334689999998655
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-14 Score=172.15 Aligned_cols=264 Identities=12% Similarity=0.134 Sum_probs=178.2
Q ss_pred EEEecCC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCC-----CeEEEEEcCCCCEEEEEecC---------ceEEEe
Q psy10114 518 LVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGN-----SVTSVAWNERGNLVAVGTHH---------GYVQVW 582 (819)
Q Consensus 518 ~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~-----~VtsLafSpdG~~LAsGs~D---------GtI~IW 582 (819)
.+.|+++ .+++.+ |+.|++||..+++...+. .+|.. ...+++|||||++|+.++.+ |.+.+|
T Consensus 21 ~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFL--ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CEEECSSSEEEEEE-TTEEEEEETTTCCEEEEE--CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCcEEEEc-CCcEEEEECCCCceEEEE--echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 4577754 444445 999999999999876543 33332 23458999999999999876 667799
Q ss_pred ecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCe-----------------E
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV-----------------C 643 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~V-----------------t 643 (819)
|+++++.. .+..|.+.+...+| +|+.|+.+ .|+.|++||+.+++... .+..++...+ .
T Consensus 98 d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 98 DLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp ETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred ECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCc
Confidence 99998754 46677888999999 57788877 46899999998766321 2222333222 3
Q ss_pred EEEECCCCCEEEEEECCC------------------------------------eEEEEECCC---Cc--eeEEEe----
Q psy10114 644 GLKWSPDNQYLASGGNDN------------------------------------RLYVWNLHS---MS--PLQTYT---- 678 (819)
Q Consensus 644 sLafSpdg~~LaSGS~DG------------------------------------tI~IWDl~t---~~--~i~t~~---- 678 (819)
++.|||||+.||.++.|. +|++||+.+ ++ ....+.
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 589999999999876332 588899988 73 233343
Q ss_pred --cCCCCEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECCCCc----e---eEE--EcCCCCe-----EEEEEccCCCEEE
Q psy10114 679 --EHLAAVKAIAWSPHHHGLLASGG-GTADRCIRFWNTLTGQ----P---MQC--VDTGSQV-----CNLAWSKHSSELV 741 (819)
Q Consensus 679 --~h~~~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~tg~----~---v~~--l~~~s~V-----~sLafSpdg~~La 741 (819)
++...+..++|+|||+.++.... +..+..|.+||+.+|+ + ... -.+...+ ...+|+|||+.++
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 27778999999999985554432 2234579999999887 2 111 2233333 3789999999887
Q ss_pred EEEecCC--CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 742 STHGYSQ--NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 742 stsGssD--g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
......+ ..|.+||..+++.. .+......|..+.. +|++.|+..+.
T Consensus 335 ~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~ 382 (740)
T 4a5s_A 335 KIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISN 382 (740)
T ss_dssp EEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEES
T ss_pred EEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEe
Confidence 3223333 46888898766554 44444556666542 44666554443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=3e-14 Score=156.04 Aligned_cols=261 Identities=12% Similarity=0.068 Sum_probs=184.2
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec----------CceEEEeecCCceEEEEEecC-----
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH----------HGYVQVWDVSVAKQVHKLVGH----- 596 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~----------DGtI~IWDl~tgk~i~tl~gH----- 596 (819)
|+.|++||..+++.... +..+..+ .++|+|||++++++.. ++.|.+||..+++.+.++...
T Consensus 30 d~~v~v~D~~t~~~~~~--i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGM--VPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GCEEEEEETTTCCEEEE--EECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred cCeEEEEECCCCeEEEE--ecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 67999999999987653 4433333 8999999999999863 678999999999988887643
Q ss_pred -CCCeEEEEe--CCceeeeccC--CCeEEEEECCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCC
Q psy10114 597 -TARVGALAW--NGDMLSSGSR--DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 597 -s~~V~sLaw--ng~~LaSGS~--DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t 670 (819)
......+++ +|++|++++. ++.|.+||+.+.+. +..+... .....+.+.|++ ..+++.+.||.+.+++...
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAA-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGG-TTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecC-CCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 234456777 6778887763 68999999988642 2330112 222335677765 6788899999999999865
Q ss_pred -CceeEEE------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee--EEEcC--------C---CCeEE
Q psy10114 671 -MSPLQTY------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM--QCVDT--------G---SQVCN 730 (819)
Q Consensus 671 -~~~i~t~------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v--~~l~~--------~---s~V~s 730 (819)
++..... .....++ .+.+++++..++... .++.+.++|+..+... ..+.. + .....
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 258 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVS---YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL 258 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEB---TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred CCcEeeeccccceEcCCCCce-EEEecccCCEEEEEe---CCCeEEEEEecCCCceecccccccCccccccccccCCeeE
Confidence 5443221 1122221 233456676666543 6789999999765422 22211 0 11123
Q ss_pred EEEccCCCEEEEEEe-c--------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 731 LAWSKHSSELVSTHG-Y--------SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 731 LafSpdg~~LastsG-s--------sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
++++|+++.++++.. . ..+.|.+||..+++.+.++..+. +.+++|+|||++|++++. ++|.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 789999999888532 1 13589999999999999999877 899999999999998886 99999999998
Q ss_pred --ceecc
Q psy10114 802 --VRSQR 806 (819)
Q Consensus 802 --~~~~k 806 (819)
+....
T Consensus 336 ~l~~~~~ 342 (361)
T 2oiz_A 336 EPKLLRT 342 (361)
T ss_dssp SCEEEEE
T ss_pred cceeeEE
Confidence 65544
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.4e-14 Score=165.14 Aligned_cols=265 Identities=11% Similarity=0.073 Sum_probs=185.9
Q ss_pred eEEEEEcCCCceEEEEecc----CCCCCeEEEEEcCCCCEEEEEecCc-----eEEEeecCCceEEEEEecCCCCeEEEE
Q psy10114 534 CVYLWSACTSQVTRLCDLS----ADGNSVTSVAWNERGNLVAVGTHHG-----YVQVWDVSVAKQVHKLVGHTARVGALA 604 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~----~h~~~VtsLafSpdG~~LAsGs~DG-----tI~IWDl~tgk~i~tl~gHs~~V~sLa 604 (819)
.+++.+..+++...+.+.. ++...+.+++|||||++||.+..++ .|++||+++++.......+ ..+.+++
T Consensus 99 ~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~ 177 (710)
T 2xdw_A 99 VLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMA 177 (710)
T ss_dssp EEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEE
T ss_pred EEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEE
Confidence 3455555455544443322 2334688999999999999876643 8999999999877643322 2366788
Q ss_pred e--CCceeeeccCCCe----------------EEEEECCCCCccceEEEec--ccCCeEEEEECCCCCEEEEEEC-----
Q psy10114 605 W--NGDMLSSGSRDRM----------------ILQRDVRTPNSQSERRLVG--HRQEVCGLKWSPDNQYLASGGN----- 659 (819)
Q Consensus 605 w--ng~~LaSGS~DGt----------------I~IWDi~t~~~~~v~~l~g--H~~~VtsLafSpdg~~LaSGS~----- 659 (819)
| +|+.|+.++.++. |++|++.++.......... |...+.++.|+|||++|+.++.
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 257 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDP 257 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSS
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCC
Confidence 9 5778888777665 9999998765332232232 4556889999999999988765
Q ss_pred CCeEEEEECCC------Cc-eeEEEecCCCCEEEEEEcCCCCeEEEEEcc-CCCCeEEEEECCCCce---eEEEcCCC--
Q psy10114 660 DNRLYVWNLHS------MS-PLQTYTEHLAAVKAIAWSPHHHGLLASGGG-TADRCIRFWNTLTGQP---MQCVDTGS-- 726 (819)
Q Consensus 660 DGtI~IWDl~t------~~-~i~t~~~h~~~VtsLafSPdg~~LLaSGgG-s~DgtIrIWDl~tg~~---v~~l~~~s-- 726 (819)
+..|++||+.+ +. ....+..+...+.. .|+++|+.+++.+.. ..+..|.+||+.+++. ...+.+..
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence 56899999976 43 45666666666655 588999988877641 1245799999988742 23333333
Q ss_pred CeEEEEEccCCCEEEEEEecCCC--eEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEE-e---CCCcEEEEECCC
Q psy10114 727 QVCNLAWSKHSSELVSTHGYSQN--QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTG-A---GDETLRFWNVFS 800 (819)
Q Consensus 727 ~V~sLafSpdg~~LastsGssDg--~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSG-S---~DGtIrIWdl~s 800 (819)
.+..++|++++..+++ ...++ .|.+||..+++.+..+..+.+.+..++++++++.++.. + ..++|..||+.+
T Consensus 337 ~~~~~~~~~~~~lv~~--~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLC--YLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEEEEETTTEEEEE--EEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred eEEEEEEEcCCEEEEE--EEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 5788999866665555 44566 56777877888888888888889999999999766533 2 357899999988
Q ss_pred Cc
Q psy10114 801 KV 802 (819)
Q Consensus 801 ~~ 802 (819)
++
T Consensus 415 g~ 416 (710)
T 2xdw_A 415 EE 416 (710)
T ss_dssp SS
T ss_pred Cc
Confidence 76
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.2e-13 Score=143.19 Aligned_cols=250 Identities=12% Similarity=0.107 Sum_probs=175.5
Q ss_pred ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--C
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--G 607 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g 607 (819)
+.++.++.|. ++ ....+..+...+.+++|+++|++++++..++.|.+||.++++.......+...+.+++++ +
T Consensus 24 ~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg 98 (333)
T 2dg1_A 24 ISESELQTIT---AE--PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG 98 (333)
T ss_dssp CCGGGSCEEE---CE--EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS
T ss_pred eecccCcccc---cc--eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC
Confidence 4456666672 11 122344556678999999999988888889999999998887665554677889999994 5
Q ss_pred ceeeeccCC----CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC------CCeEEEEECCCCceeEEE
Q psy10114 608 DMLSSGSRD----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN------DNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 608 ~~LaSGS~D----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~------DGtI~IWDl~t~~~i~t~ 677 (819)
++++++..+ +.|.+||..++..........+...+.+++++|+|+.+++... .+.|..+|..+++... +
T Consensus 99 ~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~ 177 (333)
T 2dg1_A 99 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-I 177 (333)
T ss_dssp CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-E
T ss_pred cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-e
Confidence 566666555 6899999887653211111124457899999999988776654 3567777766555433 3
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-CceeEEE--------cCCCCeEEEEEccCCCEEEEEEecCC
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-GQPMQCV--------DTGSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-g~~v~~l--------~~~s~V~sLafSpdg~~LastsGssD 748 (819)
......+..++|+|+++.++++.. .++.|.+||..+ +.....+ .....+..++++++|+..++ ...+
T Consensus 178 ~~~~~~~~~i~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~ 253 (333)
T 2dg1_A 178 IQNISVANGIALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQ 253 (333)
T ss_dssp EEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETT
T ss_pred ecCCCcccceEECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEE--EcCC
Confidence 333456789999999987777654 578999999964 3332211 11235788999999987776 4457
Q ss_pred CeEEEEECCCCcEEEEEecCCC------CEEEEEEecCCCEEEEEeCC
Q psy10114 749 NQILVWKYPTLTQVAKLTGHSY------RVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 749 g~I~IWDl~s~k~l~sl~gH~~------~VtsLafSpDG~~LaSGS~D 790 (819)
+.|.+||. +++.+..+..+.. .+.+++|++||+.|+.++.+
T Consensus 254 ~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 254 GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 89999997 5777777765443 68999999998777665555
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.9e-14 Score=154.78 Aligned_cols=259 Identities=13% Similarity=0.068 Sum_probs=171.6
Q ss_pred EEEcCCCceEEEEeccCCCC-----CeEEEEEcCCCCEEEEEecC---ceEEEeecCCceEEEEEecCCCCeEEEEe--C
Q psy10114 537 LWSACTSQVTRLCDLSADGN-----SVTSVAWNERGNLVAVGTHH---GYVQVWDVSVAKQVHKLVGHTARVGALAW--N 606 (819)
Q Consensus 537 LWd~~tg~~~~l~~l~~h~~-----~VtsLafSpdG~~LAsGs~D---GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--n 606 (819)
..|..+++... .+..+.. .+.+++|+|||++|+.+..+ ..|.+||+.+++......++......+.| +
T Consensus 14 ~~d~~~g~~~~--~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spd 91 (396)
T 3c5m_A 14 FVDSDTQVKVT--RLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTD 91 (396)
T ss_dssp EECTTTCCEEE--ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTT
T ss_pred eecCCCCcceE--EEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCC
Confidence 44666765433 3333322 26788999999998877553 46888899888765443333322333666 6
Q ss_pred CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEE-------------------EEECCCCCEEEEE-----ECCCe
Q psy10114 607 GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCG-------------------LKWSPDNQYLASG-----GNDNR 662 (819)
Q Consensus 607 g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~Vts-------------------LafSpdg~~LaSG-----S~DGt 662 (819)
|+.|+.++.++.|.+||+.+++.. .....+...... ..|+|+++.++.+ ..++.
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQ--VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEE--EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcE--EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 778989888999999999886633 222223222222 3567777766654 35678
Q ss_pred EEEEECCCCceeEEEecCCCCEEEEEEcC-CCCeEEEEEccCCC---CeEEEEECCCCceeEEEcC--CCCeEEEEEccC
Q psy10114 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSP-HHHGLLASGGGTAD---RCIRFWNTLTGQPMQCVDT--GSQVCNLAWSKH 736 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~h~~~VtsLafSP-dg~~LLaSGgGs~D---gtIrIWDl~tg~~v~~l~~--~s~V~sLafSpd 736 (819)
|.+||+.+++..... .+...+..++|+| ++..++.+..+..+ ..|.+||+.+++....... ...+..++|+|+
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTT
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCC
Confidence 999999988765444 5677899999999 78767665532111 5799999876654333232 224788999999
Q ss_pred CCEEEEEEec-CC--CeEEEEECCCCcEEEEEecCCCCEEEEEEec-CCCEEEEEe----------------CCCcEEEE
Q psy10114 737 SSELVSTHGY-SQ--NQILVWKYPTLTQVAKLTGHSYRVLYLAMSP-DGEAIVTGA----------------GDETLRFW 796 (819)
Q Consensus 737 g~~LastsGs-sD--g~I~IWDl~s~k~l~sl~gH~~~VtsLafSp-DG~~LaSGS----------------~DGtIrIW 796 (819)
|+.++.++.. .. +.|.+||+.+++...... ..+ .. ++|+| ||+.+++++ .++.|++|
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~ 325 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVL 325 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEE
Confidence 9988775321 12 449999998876543322 222 33 89999 999888765 34789999
Q ss_pred ECCCCce
Q psy10114 797 NVFSKVR 803 (819)
Q Consensus 797 dl~s~~~ 803 (819)
|+.+++.
T Consensus 326 d~~~~~~ 332 (396)
T 3c5m_A 326 NTKAKSA 332 (396)
T ss_dssp ETTTTBC
T ss_pred ecccCce
Confidence 9987754
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.7e-14 Score=165.23 Aligned_cols=245 Identities=10% Similarity=-0.002 Sum_probs=174.2
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEE--ecCceEEEeecCCceEEEEEecCCCCeE---------EEEe----CCce-eeecc
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVG--THHGYVQVWDVSVAKQVHKLVGHTARVG---------ALAW----NGDM-LSSGS 614 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsG--s~DGtI~IWDl~tgk~i~tl~gHs~~V~---------sLaw----ng~~-LaSGS 614 (819)
+.+|...+.+++|++++-.++.+ +.++...||....+...+.+..+...+. ...| +|+. |+.++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 45577899999999876666666 5588999999765666777777766655 4544 3677 65544
Q ss_pred -CCCeEEEEECC--C-CCccceEEEec-----ccCCeEEEEECCCCCEEEEEECC----------CeEEEEECCC-----
Q psy10114 615 -RDRMILQRDVR--T-PNSQSERRLVG-----HRQEVCGLKWSPDNQYLASGGND----------NRLYVWNLHS----- 670 (819)
Q Consensus 615 -~DGtI~IWDi~--t-~~~~~v~~l~g-----H~~~VtsLafSpdg~~LaSGS~D----------GtI~IWDl~t----- 670 (819)
.+..|.++++. . ++ ...+.. |...+.+++|+|||+.|++++.| ..|++||+.+
T Consensus 99 ~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp TTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred CCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 36677777775 2 33 234444 66778999999999999998877 5899999987
Q ss_pred -CceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccC-----CCCeEEEEECC-CC---ceeEEEc-CCCCeEEEEEccCCC
Q psy10114 671 -MSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGT-----ADRCIRFWNTL-TG---QPMQCVD-TGSQVCNLAWSKHSS 738 (819)
Q Consensus 671 -~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs-----~DgtIrIWDl~-tg---~~v~~l~-~~s~V~sLafSpdg~ 738 (819)
++ ...+. .+...+..++|+|||+.++.++... ....|.+||+. ++ +...... +...+..++|+|||+
T Consensus 176 ~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 176 RSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp GGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred CCc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 44 44555 5667888899999999887765311 12589999999 56 3333333 357899999999999
Q ss_pred EEEEEEecCCC--eEEEEECCCCcEEEEEecCCCC--------EEEEEEecCCCEEEEEeCCCcEEEE--ECCCCc
Q psy10114 739 ELVSTHGYSQN--QILVWKYPTLTQVAKLTGHSYR--------VLYLAMSPDGEAIVTGAGDETLRFW--NVFSKV 802 (819)
Q Consensus 739 ~LastsGssDg--~I~IWDl~s~k~l~sl~gH~~~--------VtsLafSpDG~~LaSGS~DGtIrIW--dl~s~~ 802 (819)
.+++ +..++ .|.+||..+++.......+... +.+++|+++++++++++. +.+++| |+.+++
T Consensus 255 l~~~--~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 255 LIVA--TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEE--ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEE--ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 5554 55666 6777776666654333333222 567899999999999998 999999 554444
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.2e-13 Score=138.87 Aligned_cols=235 Identities=9% Similarity=0.051 Sum_probs=171.5
Q ss_pred CCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc
Q psy10114 554 DGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 554 h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
+.....+++|+++|+ +++++..++.|..||.+++ ...+..+...+.++++ +++++++...++.|.+||..+++..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 456678999999998 7888888999999999877 6677778888999999 4667777667789999999776532
Q ss_pred ceEEE-ec-ccCCeEEEEECCCCCEEEEE----E-------------CCCeEEEEECCCCceeEEEecCCCCEEEEEEcC
Q psy10114 631 SERRL-VG-HRQEVCGLKWSPDNQYLASG----G-------------NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691 (819)
Q Consensus 631 ~v~~l-~g-H~~~VtsLafSpdg~~LaSG----S-------------~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP 691 (819)
..... .+ ....+.+++++++|+.+++. + ..+.|..+|.. ++ ...+..+......++|+|
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~ 181 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLP 181 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECT
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECC
Confidence 21111 11 12346789999999988873 3 13466666665 44 444555667789999999
Q ss_pred CCCeEEEEEccCCCCeEEEEECC-CCce---eEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe
Q psy10114 692 HHHGLLASGGGTADRCIRFWNTL-TGQP---MQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT 766 (819)
Q Consensus 692 dg~~LLaSGgGs~DgtIrIWDl~-tg~~---v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~ 766 (819)
+++.+ ++.. .++.|.+||+. +++. ...+. ....+.+++++++|+..++ . ++.|.+||.. ++.+..+.
T Consensus 182 dg~~l-v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 182 SGNLL-VSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWAS--A--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp TSCEE-EEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEE--E--TTEEEEECTT-SCEEEEEE
T ss_pred CCCEE-EEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEE--c--CCeEEEECCC-CCEEEEEE
Confidence 99987 6654 68899999987 4554 22331 2345678999999986665 3 7899999975 88888888
Q ss_pred cCCCCEEEEEE-ecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 767 GHSYRVLYLAM-SPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 767 gH~~~VtsLaf-SpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.+.. +.+++| +++++.|++++.++ +.-++..+++
T Consensus 254 ~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp CSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred CCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 7777 999999 58999999888763 3334444433
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=5e-13 Score=146.32 Aligned_cols=257 Identities=10% Similarity=0.070 Sum_probs=180.6
Q ss_pred EEecCCeEEEEE----------CCCeEEEEEcCCCceEEEEeccC----CCCCeEEEEEcCCCCEEEEEec--CceEEEe
Q psy10114 519 VDWSSQNVLSVG----------LGSCVYLWSACTSQVTRLCDLSA----DGNSVTSVAWNERGNLVAVGTH--HGYVQVW 582 (819)
Q Consensus 519 ldwS~~~LLa~g----------~Dg~V~LWd~~tg~~~~l~~l~~----h~~~VtsLafSpdG~~LAsGs~--DGtI~IW 582 (819)
++.+++.+.++. .++.|.+||..+.+......+.. +......++++|||++|+++.. ++.|.+|
T Consensus 57 ~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~ 136 (361)
T 2oiz_A 57 VSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIV 136 (361)
T ss_dssp ECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEE
T ss_pred ECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEE
Confidence 344456676665 25679999999888765444321 2345678999999999999874 5899999
Q ss_pred ecCCceEEEE-EecCCCCeEEEEe--C-CceeeeccCCCeEEEEECCCCCccceE-----EEecccCCeEEEEECCCCCE
Q psy10114 583 DVSVAKQVHK-LVGHTARVGALAW--N-GDMLSSGSRDRMILQRDVRTPNSQSER-----RLVGHRQEVCGLKWSPDNQY 653 (819)
Q Consensus 583 Dl~tgk~i~t-l~gHs~~V~sLaw--n-g~~LaSGS~DGtI~IWDi~t~~~~~v~-----~l~gH~~~VtsLafSpdg~~ 653 (819)
|+++++.+.. +.. .+. ..+.+ + +..+++.+.||.+.+++.......... .+..+...+ .+.+++++..
T Consensus 137 d~~~~~~~~~~i~~-~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~ 213 (361)
T 2oiz_A 137 DVAKGDYVEDVTAA-AGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDK 213 (361)
T ss_dssp ETTTTEEEEEEGGG-TTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSE
T ss_pred ECCCCcEEEEEecC-CCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCE
Confidence 9999988877 442 222 22233 3 357788889999999998653211100 111111121 2334567778
Q ss_pred EEEEECCCeEEEEECCCCce--eEEEecC----------CCCEEEEEEcCCCCeEEEEEc--cC------CCCeEEEEEC
Q psy10114 654 LASGGNDNRLYVWNLHSMSP--LQTYTEH----------LAAVKAIAWSPHHHGLLASGG--GT------ADRCIRFWNT 713 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t~~~--i~t~~~h----------~~~VtsLafSPdg~~LLaSGg--Gs------~DgtIrIWDl 713 (819)
++..+.++.|.++|+..... ...+... ......++++|+++.++++.. +. .++.|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 88888899999999875542 2222110 011123789999998887653 10 1358999999
Q ss_pred CCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC--cEEEEEecCCCCEEEEEEecCCC
Q psy10114 714 LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL--TQVAKLTGHSYRVLYLAMSPDGE 782 (819)
Q Consensus 714 ~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~--k~l~sl~gH~~~VtsLafSpDG~ 782 (819)
.+++.+..+..+. +.+++|+|+|+.++++ .. +.|.+||..++ +.+.++..+......++++|||+
T Consensus 294 ~t~~~v~~i~~~~-p~~ia~spdg~~l~v~--n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 294 KTKQRVARIPGRD-ALSMTIDQQRNLMLTL--DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTEEEEEEECTT-CCEEEEETTTTEEEEE--CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCcEEEEEecCC-eeEEEECCCCCEEEEe--CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999998777 9999999999999884 34 99999999999 99998877777889999999986
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.57 E-value=4.6e-13 Score=137.18 Aligned_cols=239 Identities=13% Similarity=0.049 Sum_probs=168.0
Q ss_pred CeEEEEEcCCCCEEE-EEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceE
Q psy10114 557 SVTSVAWNERGNLVA-VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 557 ~VtsLafSpdG~~LA-sGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
...+++++++|++++ +.+.++.|.+||..++........+...+.+++++ ++.+++.. ++.|..||...... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---T 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC---E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE---e
Confidence 788999999999766 44678899999976554332222334567788884 55555544 88999999876442 2
Q ss_pred EEe-cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE
Q psy10114 634 RLV-GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 634 ~l~-gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD 712 (819)
.+. .....+.+++++++|+.+++...++.|.+||..+.............+.+++++++|+ ++++.. .++.|.+||
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--~~~~i~~~~ 177 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDT--DNNRVVKLE 177 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEG--GGTEEEEEC
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEEC--CCCEEEEEe
Confidence 222 2335789999999999888777788999998665544332223334678899999997 555543 578999999
Q ss_pred CCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC
Q psy10114 713 TLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791 (819)
Q Consensus 713 l~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG 791 (819)
..++........ ...+.+++++++|...++ ...++.|.+||............+...+.+++++++|+.+++...++
T Consensus 178 ~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 178 AESNNQVVLPFTDITAPWGIAVDEAGTVYVT--EHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp TTTCCEEECCCSSCCSEEEEEECTTCCEEEE--ETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred cCCCceEeecccCCCCceEEEECCCCCEEEE--ECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 887665433222 266899999999966665 55678999999876544332223446789999999999888888999
Q ss_pred cEEEEECCCCcee
Q psy10114 792 TLRFWNVFSKVRS 804 (819)
Q Consensus 792 tIrIWdl~s~~~~ 804 (819)
.|+++++..++..
T Consensus 256 ~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 256 RVVKLTSLEHHHH 268 (270)
T ss_dssp EEEEECCCGGGSC
T ss_pred EEEEEcCCCcccc
Confidence 9999998876643
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=163.56 Aligned_cols=262 Identities=12% Similarity=-0.009 Sum_probs=178.0
Q ss_pred eEEEEEcCCCceEEEEecc----CCCCCeEEEEEcCCCCEEEEE-----ecCceEEEeecCCceEEEEEecCCCCe--EE
Q psy10114 534 CVYLWSACTSQVTRLCDLS----ADGNSVTSVAWNERGNLVAVG-----THHGYVQVWDVSVAKQVHKLVGHTARV--GA 602 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~----~h~~~VtsLafSpdG~~LAsG-----s~DGtI~IWDl~tgk~i~tl~gHs~~V--~s 602 (819)
.+++.+..+++...+.+.. +|...+.+++|||||++||.+ +.+..|++||+++++.+. ..+...+ .+
T Consensus 95 ~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~ 172 (695)
T 2bkl_A 95 ILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYAT 172 (695)
T ss_dssp EEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCC
T ss_pred EEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccc
Confidence 3555565566655554432 344578999999999999944 445689999999988641 1122222 67
Q ss_pred EEe--CCceeeeccCCCe-------------EEEEECCCCCcc--ceEEEecccCCeEEEEECCCCCEEEEEECCC----
Q psy10114 603 LAW--NGDMLSSGSRDRM-------------ILQRDVRTPNSQ--SERRLVGHRQEVCGLKWSPDNQYLASGGNDN---- 661 (819)
Q Consensus 603 Law--ng~~LaSGS~DGt-------------I~IWDi~t~~~~--~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG---- 661 (819)
++| +|+.|+.++.|+. |++|++.++... .+.....+...+.++.|+|||++|+.++.++
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 889 5678888887765 999999887633 2222334556789999999999998887766
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECCCCce---eEEEcC--CCCeEEEEEcc
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG-GTADRCIRFWNTLTGQP---MQCVDT--GSQVCNLAWSK 735 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~tg~~---v~~l~~--~s~V~sLafSp 735 (819)
.|.++|..+++ ...+..+...+....+ ++|. +++.+. +..++.|.+||+.+++. ...+.+ ...+..++|+
T Consensus 253 ~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 253 DVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEECTTCSS-CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred EEEEEcCCCCc-eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 67788765554 4455556666666666 6666 665543 12368999999988753 333333 3457888887
Q ss_pred CCCEEEEEEecCCCeEEEEECC-CCcEEEEEecC-CCCEEEEEEecCCCEEEEE----eCCCcEEEEECCCCce
Q psy10114 736 HSSELVSTHGYSQNQILVWKYP-TLTQVAKLTGH-SYRVLYLAMSPDGEAIVTG----AGDETLRFWNVFSKVR 803 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~-s~k~l~sl~gH-~~~VtsLafSpDG~~LaSG----S~DGtIrIWdl~s~~~ 803 (819)
++..+++ ...++..++|.+. +++....+..+ .+.+..+++++|++.++.. ..+++|++||+.+++.
T Consensus 329 ~~~lv~~--~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 329 GGHLSLE--YLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTEEEEE--EEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCEEEEE--EEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 5555554 5677877777654 46666666655 6678888999999877633 2357899999988764
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.5e-11 Score=122.57 Aligned_cols=269 Identities=9% Similarity=-0.020 Sum_probs=185.3
Q ss_pred EEEEEecC-CeEEEEEC-CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 516 LNLVDWSS-QNVLSVGL-GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 516 v~~ldwS~-~~LLa~g~-Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
+..+..++ +.+..+.. ++.|..||.. ++.... ........+.+++++++|.+.++...++.|..||.+ ++. ..+
T Consensus 17 ~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~ 92 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKANMISCINLD-GKITEY-PLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEY 92 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred ccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe-cCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEE
Confidence 44555553 34555554 6899999988 665443 333345789999999999988877778899999986 332 333
Q ss_pred e--cCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 594 V--GHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 594 ~--gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
. .....+.+++++ +..+++...++.|..+|. +++.. ..........+.+++++++|+..++...++.|..+|.
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 2 345678889994 556666667889999998 43321 1222334567899999999988887777889999998
Q ss_pred CCceeEE-EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEE-Ec-CCCCeEEEEEccCCCEEEEEEec
Q psy10114 670 SMSPLQT-YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQC-VD-TGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 670 t~~~i~t-~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~-l~-~~s~V~sLafSpdg~~LastsGs 746 (819)
+++.... .......+.++++++++. ++++.. .++.|..||. +++.... .. ....+.+++++++|+..++ ..
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~ 243 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDA-LWFVEI--IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFT--EW 243 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE--ET
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCC-EEEEcc--CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEe--cc
Confidence 6654432 233456688999999988 444432 5789999999 6664332 12 3367899999999986555 45
Q ss_pred CCCeEEEEECCCCcEEEEE--ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 747 SQNQILVWKYPTLTQVAKL--TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 747 sDg~I~IWDl~s~k~l~sl--~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.++.|..||. +++ +..+ ..+...+.++++ ++|+..++.+ .+.+..++..++
T Consensus 244 ~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 244 GANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp TTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred CCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 6789999998 443 3333 344567999999 8888776654 567777776654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.4e-12 Score=131.07 Aligned_cols=230 Identities=10% Similarity=0.148 Sum_probs=161.2
Q ss_pred EEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEec----cCCCCCeEEEEE-cCCCCEEEEEec-CceEEEeecCCce
Q psy10114 517 NLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDL----SADGNSVTSVAW-NERGNLVAVGTH-HGYVQVWDVSVAK 588 (819)
Q Consensus 517 ~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l----~~h~~~VtsLaf-SpdG~~LAsGs~-DGtI~IWDl~tgk 588 (819)
..+.++ +..+++...++.|.+||.. ++....... .++...+.++++ .++|+++++... ++.|.+|| .+++
T Consensus 33 ~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~ 110 (286)
T 1q7f_A 33 SGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQ 110 (286)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSC
T ss_pred ceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCc
Confidence 344444 3444555567899999987 444332221 123357899999 567766666543 78999999 6677
Q ss_pred EEEEEe-cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEe--cccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 589 QVHKLV-GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLV--GHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 589 ~i~tl~-gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~--gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
.+..+. .+...+.++++ +++.+++...++.|.+||... + ....+. .+...+.+++++++|+.+++.+.++.|
T Consensus 111 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~--~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 111 FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-N--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-C--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-C--EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 777765 34467889999 466777777889999999653 2 223332 345678999999999988888889999
Q ss_pred EEEECCCCceeEEEecC--CCCEEEEEEcCCCCeEEEEEccCCCC-eEEEEECCCCceeEEEcC---CCCeEEEEEccCC
Q psy10114 664 YVWNLHSMSPLQTYTEH--LAAVKAIAWSPHHHGLLASGGGTADR-CIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHS 737 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h--~~~VtsLafSPdg~~LLaSGgGs~Dg-tIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg 737 (819)
++||. +++.+..+..+ ...+..++++++|. ++++.. .++ .|.+||. +++.+..+.. ...+.+++++++|
T Consensus 188 ~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 188 KVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADN--HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp EEEET-TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEEC--SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred EEEcC-CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeC--CCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC
Confidence 99997 45666666543 36789999999997 444443 454 9999995 5666666533 2347899999999
Q ss_pred CEEEEEEecCCCeEEEEECCCC
Q psy10114 738 SELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 738 ~~LastsGssDg~I~IWDl~s~ 759 (819)
+.+++ . .++.|++|++...
T Consensus 263 ~l~vs--~-~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 263 SVVLA--S-KDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEE--E-TTTEEEEEECSCC
T ss_pred cEEEE--C-CCCeEEEEEcccc
Confidence 75554 3 5899999998654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-12 Score=137.57 Aligned_cols=239 Identities=11% Similarity=0.099 Sum_probs=174.2
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccce
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v 632 (819)
...|.+++|++++..++..+.++.++.| .++....+..+...+.+++|+ +++++++..++.|.+||..+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-- 79 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-- 79 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE--
Confidence 3557888999988878777888899999 456677777788888999994 566678888999999999876532
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECC----CeEEEEECCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEcc---C
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGND----NRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGG---T 703 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgG---s 703 (819)
.....+...+.+++++++|+++++...+ +.|.+||.++++....+. .+...+.+++++|+|..++++..+ .
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 2223466789999999999988877766 689999998876543333 234578999999999755543210 0
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC-CcEEEEE--------ecCCCCEEE
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT-LTQVAKL--------TGHSYRVLY 774 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s-~k~l~sl--------~gH~~~Vts 774 (819)
..+.|..+|..+++..........+..++|+|+|+.++++ ...++.|.+||..+ +..+..+ .++ ..+..
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~-~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 237 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT-ETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDS 237 (333)
T ss_dssp CCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE-EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEE
T ss_pred CCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEE-eCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCc
Confidence 1356777777665554433334567899999999977664 45578999999863 3332211 122 46788
Q ss_pred EEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 775 LAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 775 LafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
++++++|++.++...++.|.+||...
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred eEECCCCCEEEEEcCCCEEEEECCCC
Confidence 99999999888888889999999853
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.51 E-value=7.4e-12 Score=130.84 Aligned_cols=240 Identities=10% Similarity=0.081 Sum_probs=169.1
Q ss_pred CCCeEEEEEcCCCCEEEE-------EecCceEEEeecCCceEEEEEe----cCCCCeEEEEeCC--ceeeeccCCCeEEE
Q psy10114 555 GNSVTSVAWNERGNLVAV-------GTHHGYVQVWDVSVAKQVHKLV----GHTARVGALAWNG--DMLSSGSRDRMILQ 621 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAs-------Gs~DGtI~IWDl~tgk~i~tl~----gHs~~V~sLawng--~~LaSGS~DGtI~I 621 (819)
-....+++|+++|+++++ ++.++.|.+||..+++...... ++...+.+++++. ..+..++.++.|.+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 356789999999988877 5778999999988877543222 2456788999943 34444444557889
Q ss_pred EECCCCCccce-EEE--ecccCCeEEEEECCCCCEEEEEECC---------------CeEEEEECCCCceeEEEecCCCC
Q psy10114 622 RDVRTPNSQSE-RRL--VGHRQEVCGLKWSPDNQYLASGGND---------------NRLYVWNLHSMSPLQTYTEHLAA 683 (819)
Q Consensus 622 WDi~t~~~~~v-~~l--~gH~~~VtsLafSpdg~~LaSGS~D---------------GtI~IWDl~t~~~i~t~~~h~~~ 683 (819)
||.. ++.... ... ......+.+++++++|+.+++...+ +.|..+|.. ++... +..+...
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~ 173 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQF 173 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESS
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCC
Confidence 9987 442211 100 0112458899999999988777655 578888865 54433 3334455
Q ss_pred EEEEEEc----CCCCeEEEEEccCCCCeEEEEECC-CCce-----eEEEcCC--CCeEEEEEccCCCEEEEEEecCCCeE
Q psy10114 684 VKAIAWS----PHHHGLLASGGGTADRCIRFWNTL-TGQP-----MQCVDTG--SQVCNLAWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 684 VtsLafS----Pdg~~LLaSGgGs~DgtIrIWDl~-tg~~-----v~~l~~~--s~V~sLafSpdg~~LastsGssDg~I 751 (819)
...++++ |+++.++++.. .++.|.+||.. +++. ...+... ..+..++++++|+..++ ...++.|
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~~~~~~i 249 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSSHI 249 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTTEE
T ss_pred cceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEE--EcCCCEE
Confidence 6889999 99987777654 67899999986 4442 1222222 45788999999987776 4467899
Q ss_pred EEEECCCCcEEEEEecCCCCEEEEEEecCCCEEE-EEeCCCcEEEEECCCC
Q psy10114 752 LVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV-TGAGDETLRFWNVFSK 801 (819)
Q Consensus 752 ~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~La-SGS~DGtIrIWdl~s~ 801 (819)
.+||..+++.+..+..+...+.+++|+++|+.|. +...++.|..|++...
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9999887877777777778899999999999554 4556789999998753
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-11 Score=142.39 Aligned_cols=271 Identities=11% Similarity=0.116 Sum_probs=196.7
Q ss_pred eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecC--CceEEEEEecCCCCeEE
Q psy10114 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVS--VAKQVHKLVGHTARVGA 602 (819)
Q Consensus 525 ~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~--tgk~i~tl~gHs~~V~s 602 (819)
.+++...++.|.++|..+++....... ...+..+.|+|||+++++++.||.|.+||+. +++.+.++.... ....
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~---g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ 244 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARS 244 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeC---CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCce
Confidence 455556779999999999987764432 3467799999999999999999999999995 888888877533 3457
Q ss_pred EEeC------Cceeeecc-CCCeEEEEECCCCCccceEEEec--------ccC-CeEEEEECCCCCEE-EEEECCCeEEE
Q psy10114 603 LAWN------GDMLSSGS-RDRMILQRDVRTPNSQSERRLVG--------HRQ-EVCGLKWSPDNQYL-ASGGNDNRLYV 665 (819)
Q Consensus 603 Lawn------g~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~g--------H~~-~VtsLafSpdg~~L-aSGS~DGtI~I 665 (819)
++++ |+++++++ .+++|.++|..+.+........+ |.. .+..+..++++..+ +....+|.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 7775 55666555 56999999988765332222111 222 67889999987654 44556799999
Q ss_pred EECCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCe---EEEE-EccCCCE
Q psy10114 666 WNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQV---CNLA-WSKHSSE 739 (819)
Q Consensus 666 WDl~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V---~sLa-fSpdg~~ 739 (819)
+|..+.+...... ........+.|+|++++++++.. .++.|.++|+.+++.+..+.. +... .... ++|++..
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~--~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~ 402 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGP 402 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeC--CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCc
Confidence 9987754322211 23445678899999999988875 678999999999998877765 3211 1222 5788666
Q ss_pred EEEEEecCCCeEEEEECCC-------CcEEEEEecCCCCEEEEEEecCCCEEEEEeC-------CCcEEEEECCCC
Q psy10114 740 LVSTHGYSQNQILVWKYPT-------LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-------DETLRFWNVFSK 801 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s-------~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~-------DGtIrIWdl~s~ 801 (819)
++++....++.|.++|..+ .+.+.++......-..+..+||++++.+... .++|.++|+.+.
T Consensus 403 v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 403 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 6655444578999999987 7788888865444455788999999988663 359999999876
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.5e-12 Score=135.78 Aligned_cols=261 Identities=11% Similarity=0.039 Sum_probs=182.4
Q ss_pred CCeEEEEEcCCCceEEEEec--c--CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-C
Q psy10114 532 GSCVYLWSACTSQVTRLCDL--S--ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-N 606 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l--~--~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-n 606 (819)
++.|.++|..+++....... . .-......+++. +++..++...++.|.++|.++++.+.++.. ......+++ .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeC
Confidence 68999999999886542111 1 112456778874 344555555679999999999999888863 456778888 3
Q ss_pred Cceeeecc-CCCeEEEEECCCCCccceEEEeccc-----CCeEEEEECCCCCEEEEEE--CCCeEEEEECCCCceeEEEe
Q psy10114 607 GDMLSSGS-RDRMILQRDVRTPNSQSERRLVGHR-----QEVCGLKWSPDNQYLASGG--NDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 607 g~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~-----~~VtsLafSpdg~~LaSGS--~DGtI~IWDl~t~~~i~t~~ 678 (819)
++.+.++. .++.|.++|..+.+.. ..+.... ....++++ +++.+.++. .++.|.++|.++++.+.++.
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~--~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEIT--GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEE--EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCeEEEEECCCCeEE--EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 33555554 8999999999886532 2333221 14556777 345555554 48899999999999888776
Q ss_pred cCCCCEEEEEEcCCCCeEEEEEccCC--------CCeEEEEECCCCceeEEEcC--CCCeEEEEEccCCCEEEEEEecCC
Q psy10114 679 EHLAAVKAIAWSPHHHGLLASGGGTA--------DRCIRFWNTLTGQPMQCVDT--GSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 679 ~h~~~VtsLafSPdg~~LLaSGgGs~--------DgtIrIWDl~tg~~v~~l~~--~s~V~sLafSpdg~~LastsGssD 748 (819)
.. .....++++|+|+.+++ +.+.. .+.|.++|..+++....+.. +.....++++|+++.++++ .
T Consensus 170 ~g-~~p~~i~~~~dG~l~v~-~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~--~-- 243 (328)
T 3dsm_A 170 IG-IQPTSLVMDKYNKMWTI-TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI--N-- 243 (328)
T ss_dssp CS-SCBCCCEECTTSEEEEE-BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE--S--
T ss_pred cC-CCccceEEcCCCCEEEE-ECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE--c--
Confidence 53 34468899999984444 33211 27899999999988877754 4578999999999999984 2
Q ss_pred CeEEEEECCCCcEEEE--EecCCCCEEEEEEec-CCCEEEEE----eCCCcEEEEECCCCceec
Q psy10114 749 NQILVWKYPTLTQVAK--LTGHSYRVLYLAMSP-DGEAIVTG----AGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 749 g~I~IWDl~s~k~l~s--l~gH~~~VtsLafSp-DG~~LaSG----S~DGtIrIWdl~s~~~~~ 805 (819)
+.|.++|..+++.... +........+++++| ++...++. ..++.|.+||.. ++...
T Consensus 244 ~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~ 306 (328)
T 3dsm_A 244 NDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLID 306 (328)
T ss_dssp SSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEE
T ss_pred cEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEE
Confidence 2899999988775321 111245689999999 55566665 578999999998 55443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-12 Score=133.01 Aligned_cols=211 Identities=13% Similarity=0.057 Sum_probs=167.2
Q ss_pred CCCEEEEEecCceEEEeecCCceEEEEEecCC-CCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecc-cCC
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT-ARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGH-RQE 641 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs-~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH-~~~ 641 (819)
.++.|++++.|+.|.+||.++|+.+.++..+. ..+.++++ +|++++ +.++.|..+|. +++ .+..+..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~--~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR--ELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC--EEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC--EEEEEcCCCCcc
Confidence 46789999999999999999999999998776 46777777 677777 45778999998 554 33444443 357
Q ss_pred eEEEEECCCCCEEEEEEC-CCeEEEEECCCCceeEEEec------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC
Q psy10114 642 VCGLKWSPDNQYLASGGN-DNRLYVWNLHSMSPLQTYTE------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~-DGtI~IWDl~t~~~i~t~~~------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~ 714 (819)
+.++.+.++|+.+++.+. ++.|..+|. +++.+.++.. +......++..++|..+++ .. .++.|..||..
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~-~~--~~~~v~~~d~~ 154 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LF--ATSEVREIAPN 154 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE-ET--TTTEEEEECTT
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEE-ec--CCCEEEEECCC
Confidence 889999999999999887 788888886 7777776652 2223456678899986654 33 68999999988
Q ss_pred CCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC------CCEEEEEEecCCCEEEEEe
Q psy10114 715 TGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS------YRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 715 tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~------~~VtsLafSpDG~~LaSGS 788 (819)
|+.+..+.......++...++|+.+++ +..++.|..+|..+++.+.++..+. ..+.+++..++|..+++..
T Consensus 155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~--~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 -GQLLNSVKLSGTPFSSAFLDNGDCLVA--CGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp -SCEEEEEECSSCCCEEEECTTSCEEEE--CBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred -CCEEEEEECCCCccceeEcCCCCEEEE--eCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999987777778888999999888 6677899999999999999987542 2378899999999888774
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-11 Score=131.32 Aligned_cols=217 Identities=12% Similarity=0.080 Sum_probs=160.2
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-EEEEE---------ecCCCCeEE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-QVHKL---------VGHTARVGA 602 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-~i~tl---------~gHs~~V~s 602 (819)
+.|.+||..+++...... .++......++++++|+++++...++.|++||.+... .+..+ .++-.....
T Consensus 69 ~~i~~~d~~~g~~~~~~~-~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG-KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CCEEEECTTTCCEEEEEC-TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CcEEEEECCCCeEEeccC-CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 379999999888765322 2344678999999999988888889999999976442 45555 234456889
Q ss_pred EEeC---Cceeeecc-CCCeEEEEECCCCCccceEEEec----------ccCCeEEEEECCC-CCEEEEEECCCeEEEEE
Q psy10114 603 LAWN---GDMLSSGS-RDRMILQRDVRTPNSQSERRLVG----------HRQEVCGLKWSPD-NQYLASGGNDNRLYVWN 667 (819)
Q Consensus 603 Lawn---g~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~g----------H~~~VtsLafSpd-g~~LaSGS~DGtI~IWD 667 (819)
++++ ++.+++.+ .++.|++||... . ....+.. +-....+++++++ ++.+++...++.|++||
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSPSG-K--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECTTS-C--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcCCC-C--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 9995 34666665 689999999433 2 2233322 2234899999998 77777777889999999
Q ss_pred CCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEc-----cCCCCeEEEEECCCCceeEEEc----CCCCeEEEEEccC
Q psy10114 668 LHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGG-----GTADRCIRFWNTLTGQPMQCVD----TGSQVCNLAWSKH 736 (819)
Q Consensus 668 l~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGg-----Gs~DgtIrIWDl~tg~~v~~l~----~~s~V~sLafSpd 736 (819)
..+++.+..+. .+...+.+++++| + .++.+.+ +..+..|++||..+++.+..+. ....+..++++++
T Consensus 225 ~~~G~~~~~~~~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 225 TDTKEFVREIKHASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp TTTCCEEEEECCTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT
T ss_pred CCCCcEEEEEeccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC
Confidence 99898888874 4566789999999 3 3333332 1245689999999999988874 3456899999999
Q ss_pred CCEEEEEEecCCCeEEEEECC
Q psy10114 737 SSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 737 g~~LastsGssDg~I~IWDl~ 757 (819)
|..+++ ...++.|++|+..
T Consensus 303 G~lyva--d~~~~~I~~~~~~ 321 (329)
T 3fvz_A 303 GTVYIG--DAHTNTVWKFTLT 321 (329)
T ss_dssp SEEEEE--ESSSCCEEEEEEE
T ss_pred CCEEEE--ECCCCEEEEEeCC
Confidence 955555 6678899999974
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.5e-11 Score=139.63 Aligned_cols=286 Identities=11% Similarity=0.078 Sum_probs=204.2
Q ss_pred EEEEecCCeEEEEECCCeEEEEEcC--CCceEEEEeccCCCCCeEEEEEc----CCCCEEEEEec-CceEEEeecCCceE
Q psy10114 517 NLVDWSSQNVLSVGLGSCVYLWSAC--TSQVTRLCDLSADGNSVTSVAWN----ERGNLVAVGTH-HGYVQVWDVSVAKQ 589 (819)
Q Consensus 517 ~~ldwS~~~LLa~g~Dg~V~LWd~~--tg~~~~l~~l~~h~~~VtsLafS----pdG~~LAsGs~-DGtI~IWDl~tgk~ 589 (819)
..++.+++.+++++.++.|.+||.. +++... ++.. ......++|+ |||++++++.. +++|.|+|..+.+.
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~--~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA--EIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEE--EEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred eEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE--EEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 3455567788889999999999995 666554 3333 3456899999 69999888765 59999999999998
Q ss_pred EEEEecC-----------CCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE
Q psy10114 590 VHKLVGH-----------TARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA 655 (819)
Q Consensus 590 i~tl~gH-----------s~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La 655 (819)
+.++... ..++..+..+ +..+++...+|.|.+.|....+...+..+ .......++.|+|+|++++
T Consensus 279 ~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~ 357 (567)
T 1qks_A 279 KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFI 357 (567)
T ss_dssp EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEE
T ss_pred EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEE
Confidence 8877522 2267777773 33666667889999999987553322232 3345577889999999887
Q ss_pred EEE-CCCeEEEEECCCCceeEEEec-----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCC-------CceeEEE
Q psy10114 656 SGG-NDNRLYVWNLHSMSPLQTYTE-----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLT-------GQPMQCV 722 (819)
Q Consensus 656 SGS-~DGtI~IWDl~t~~~i~t~~~-----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~t-------g~~v~~l 722 (819)
++. .+++|.++|..+++.+..+.. |.+.-..+ ++|++..+++++. ..+++|.++|..+ .+.++.+
T Consensus 358 va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~-~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 358 TAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSH-MGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCC-CCCCeEEEecCCCCCCccccCEEEEEE
Confidence 765 578999999999987776654 33222222 5888666766652 2468999999988 5677777
Q ss_pred cCCC-CeEEEEEccCCCEEEEEEecC-----CCeEEEEECCCC-----cE-EEEEe--------cCCCCEEEEEEecCCC
Q psy10114 723 DTGS-QVCNLAWSKHSSELVSTHGYS-----QNQILVWKYPTL-----TQ-VAKLT--------GHSYRVLYLAMSPDGE 782 (819)
Q Consensus 723 ~~~s-~V~sLafSpdg~~LastsGss-----Dg~I~IWDl~s~-----k~-l~sl~--------gH~~~VtsLafSpDG~ 782 (819)
.... .-..+..+|+++++++..... .++|.++|+.+. .. ...+. ....++..+.|+++|+
T Consensus 436 ~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 515 (567)
T 1qks_A 436 PALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGT 515 (567)
T ss_dssp ECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSS
T ss_pred ecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCC
Confidence 6543 335578899999999843111 469999999876 22 23332 1245789999999999
Q ss_pred EEEEEe-----CCCcEEEEECCCCceecccc
Q psy10114 783 AIVTGA-----GDETLRFWNVFSKVRSQRES 808 (819)
Q Consensus 783 ~LaSGS-----~DGtIrIWdl~s~~~~~k~~ 808 (819)
.+..+. .++.|.++|..+.+......
T Consensus 516 ~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 516 EVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred EEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 887663 37999999999987654443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-11 Score=147.51 Aligned_cols=243 Identities=13% Similarity=0.083 Sum_probs=162.8
Q ss_pred CCeEEEEEcCCCCEEEEEecC-----ceEEEeecCCceEEEEEecCCCCeEEEEeCC-ceeeeccCCCe-----------
Q psy10114 556 NSVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVAKQVHKLVGHTARVGALAWNG-DMLSSGSRDRM----------- 618 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tgk~i~tl~gHs~~V~sLawng-~~LaSGS~DGt----------- 618 (819)
..+.+++|||||++||.++.+ ..|++||+++++.+... .+...+..++|++ +.|+.++.|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccCCC
Confidence 368899999999999987654 46999999999876532 1222235778833 67776665543
Q ss_pred ---EEEEECCCCCccceEEEec--ccCCeEEEEECCCCCEEEEEECCC-----eEEEEECCCC--ceeEEEecCCCCEEE
Q psy10114 619 ---ILQRDVRTPNSQSERRLVG--HRQEVCGLKWSPDNQYLASGGNDN-----RLYVWNLHSM--SPLQTYTEHLAAVKA 686 (819)
Q Consensus 619 ---I~IWDi~t~~~~~v~~l~g--H~~~VtsLafSpdg~~LaSGS~DG-----tI~IWDl~t~--~~i~t~~~h~~~Vts 686 (819)
|++|++.++.......... +...+.++.|||||++|+..+.++ .|++||+.++ ++...+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 8899987765322233332 333588999999999998877544 8999999877 424556555555555
Q ss_pred EEEcCCCCeEEEEEcc-CCCCeEEEEECCCC--ceeEEEcCC-CCeEEEEEccCCCEEEEEEecCCCeEEEEECC-CCcE
Q psy10114 687 IAWSPHHHGLLASGGG-TADRCIRFWNTLTG--QPMQCVDTG-SQVCNLAWSKHSSELVSTHGYSQNQILVWKYP-TLTQ 761 (819)
Q Consensus 687 LafSPdg~~LLaSGgG-s~DgtIrIWDl~tg--~~v~~l~~~-s~V~sLafSpdg~~LastsGssDg~I~IWDl~-s~k~ 761 (819)
.. +|+|+.+++.+.. ..++.|.+||+.++ +....+.+. ..+..++++ ++..+++ ...++..++|.+. +++.
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~--~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFAS--YIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEE--EEETTEEEEEEEETTSCE
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEE--EEECCEEEEEEEeCCCCc
Confidence 54 4888888776531 12567999999875 333333333 335667776 3344444 5567776666554 4666
Q ss_pred EEEEec-CCCCEEEEEEecCCCEEEEE----eCCCcEEEEECCCCce
Q psy10114 762 VAKLTG-HSYRVLYLAMSPDGEAIVTG----AGDETLRFWNVFSKVR 803 (819)
Q Consensus 762 l~sl~g-H~~~VtsLafSpDG~~LaSG----S~DGtIrIWdl~s~~~ 803 (819)
...+.. +.+.+..+++++|++.++.. ...++|+.||+.+++.
T Consensus 398 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 666664 36678899999998866532 2357899999988764
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-11 Score=130.86 Aligned_cols=245 Identities=8% Similarity=-0.049 Sum_probs=175.9
Q ss_pred EEEecCCeEEEEEC-CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEec
Q psy10114 518 LVDWSSQNVLSVGL-GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 518 ~ldwS~~~LLa~g~-Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~g 595 (819)
.+..+++.+..+.. ++.|.++|..+++..... . .......++++++| .++++. .++.|.+||.++++....+..
T Consensus 48 ~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i--~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 48 SMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI--T-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp EEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE--E-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCEEEEEEcCCCEEEEEECcccEEEEEc--C-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEc
Confidence 34456666555554 689999999999876533 2 24678999999988 455555 789999999999998877764
Q ss_pred CC-----CCeEEEEeCCceeeecc--CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC--------
Q psy10114 596 HT-----ARVGALAWNGDMLSSGS--RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-------- 660 (819)
Q Consensus 596 Hs-----~~V~sLawng~~LaSGS--~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-------- 660 (819)
.. .....++++++.+++++ .++.|.++|..+.+. ...+.. .....+++++++|++++++..+
T Consensus 124 g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~--~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKV--VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp TTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEE--EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeE--EEEEEc-CCCccceEEcCCCCEEEEECCCccCCcccc
Confidence 33 14456666666655554 489999999988653 233332 3345688999999877776554
Q ss_pred --CeEEEEECCCCceeEEEecC-CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEE--EcC-CCCeEEEEEc
Q psy10114 661 --NRLYVWNLHSMSPLQTYTEH-LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQC--VDT-GSQVCNLAWS 734 (819)
Q Consensus 661 --GtI~IWDl~t~~~i~t~~~h-~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~--l~~-~s~V~sLafS 734 (819)
+.|.++|.++++....+... ......++++|+++.++++ ++.|.+||..+++.... +.. ......++++
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~-----~~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI-----NNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE-----SSSEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE-----ccEEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 78999999999887776533 2367899999999988775 23899999998875321 122 4678999999
Q ss_pred cCCCEEEEEEe----cCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 735 KHSSELVSTHG----YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 735 pdg~~LastsG----ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
|++..++++ . ..++.|.+||.. ++.+.++.... ....++|
T Consensus 276 p~~g~lyva-~~~~y~~~~~V~v~d~~-g~~~~~i~~G~-~P~~~~~ 319 (328)
T 3dsm_A 276 PNNGEVYVA-DAIDYQQQGIVYRYSPQ-GKLIDEFYVGI-IPGAFCW 319 (328)
T ss_dssp TTTCCEEEE-ECTTSSSEEEEEEECTT-CCEEEEEEEEE-SEEEEEE
T ss_pred CCCCeEEEE-cccccccCCEEEEECCC-CCEEEEEEecc-CcceEEE
Confidence 966666664 3 467899999987 88888876322 2355555
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.45 E-value=8.1e-12 Score=132.67 Aligned_cols=229 Identities=10% Similarity=0.139 Sum_probs=150.7
Q ss_pred EEEEec--CCeEEEEECC---C--eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-------------
Q psy10114 517 NLVDWS--SQNVLSVGLG---S--CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH------------- 576 (819)
Q Consensus 517 ~~ldwS--~~~LLa~g~D---g--~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D------------- 576 (819)
..+.|+ ++.++.++.+ + .|++|++.+++...+.... . +.+++|+|||+.|+.++.+
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 345566 5567766643 2 4888899888776654432 3 9999999999999888742
Q ss_pred --------------ceEEEeecCCceEEEEEecCCCCeEEEEeCCc-eeeeccCCC-------eEEEEECCCCCccceEE
Q psy10114 577 --------------GYVQVWDVSVAKQVHKLVGHTARVGALAWNGD-MLSSGSRDR-------MILQRDVRTPNSQSERR 634 (819)
Q Consensus 577 --------------GtI~IWDl~tgk~i~tl~gHs~~V~sLawng~-~LaSGS~DG-------tI~IWDi~t~~~~~v~~ 634 (819)
..|.+||+.+++.+..+.. . .+..++|+++ .+++++.++ ...+|.+++++ ...
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~---~~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK---EEK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE---EEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc---eEE
Confidence 5799999998887555555 3 7788888432 666665432 33444444332 233
Q ss_pred EecccCCeEEEEECCCCCEEEEEECC--------CeEEEEECCCCceeEEEecCCCCEEE-EEEcCCCCeEEEEEccCCC
Q psy10114 635 LVGHRQEVCGLKWSPDNQYLASGGND--------NRLYVWNLHSMSPLQTYTEHLAAVKA-IAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 635 l~gH~~~VtsLafSpdg~~LaSGS~D--------GtI~IWDl~t~~~i~t~~~h~~~Vts-LafSPdg~~LLaSGgGs~D 705 (819)
+..+ ..+..+ +|||+.|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++ .+
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~--~~ 282 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLF--EE 282 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEE--ET
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEe--cC
Confidence 4444 455544 9999999888754 3688888 55554444456778886 9999 77 555554 78
Q ss_pred CeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeE-EEEECCCCcEEEEEecCCCC
Q psy10114 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQI-LVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I-~IWDl~s~k~l~sl~gH~~~ 771 (819)
+.+++| +.+++..........+.+++|++ ..+++ +..++.. .+|.+. ++ ...+..|...
T Consensus 283 ~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~--~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 283 GSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYL--KETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp TEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEE--EECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred CcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEE--EcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 899999 87776655555667789999999 45554 3334433 666665 44 4456655543
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.4e-10 Score=115.13 Aligned_cols=268 Identities=12% Similarity=-0.001 Sum_probs=181.0
Q ss_pred EEEEEecC-CeEEEEE-CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE-E
Q psy10114 516 LNLVDWSS-QNVLSVG-LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH-K 592 (819)
Q Consensus 516 v~~ldwS~-~~LLa~g-~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~-t 592 (819)
...+..+. +.+..+. .++.|..+|.. ++... ..+......+.+++++++|++.++...++.|..+|.. ++... .
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEec
Confidence 34444443 3344444 57899999988 66654 3344445789999999999877777668899999987 55432 2
Q ss_pred EecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 593 LVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 593 l~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
.......+.+++++ ++.+++...++.|..+|.. ++.. ...+......+.++++.++|+..++...++.|..+|. +
T Consensus 99 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 99 LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 22244678889984 5566666668899999987 3321 1222334567899999999997766666789999998 5
Q ss_pred CceeEE-EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE-c-CCCCeEEEEEccCCCEEEEEEecC
Q psy10114 671 MSPLQT-YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV-D-TGSQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 671 ~~~i~t-~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l-~-~~s~V~sLafSpdg~~LastsGss 747 (819)
++.... .......+.+++++++|. +.++.. ..+.|..+|. +++..... . ....+.+++++++|+..++ ...
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~ 249 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFT--EWG 249 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE--ETT
T ss_pred CcEEEeeCCCCCCCcceEEECCCCC-EEEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEe--ccC
Confidence 554332 223445789999999986 444432 4678999998 55544332 2 3456899999999986555 445
Q ss_pred CCeEEEEECCCCcEEE-EEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 748 QNQILVWKYPTLTQVA-KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~-sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
++.|..+|. +++... .+......+.+++++++|+..++.. . .|..+|.
T Consensus 250 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 250 ANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 789999998 444332 2233456688999999998666544 4 6666654
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=6.5e-10 Score=114.48 Aligned_cols=239 Identities=10% Similarity=0.041 Sum_probs=170.9
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE-ecCCCCeEEEEeC--CceeeeccCCCeEEEEECCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL-VGHTARVGALAWN--GDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl-~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t 626 (819)
.+..+...+.+++++++|+..++...++.|.+||.. ++..... ..+...+.+++++ +..+++...++.|..||...
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 87 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG 87 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC
Confidence 344456789999999999977776668899999988 5533322 2345678899994 55666666688999999762
Q ss_pred CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE-EecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT-YTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t-~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
+ ............+.+++++++|+.+++...++.|..||. +++.... .......+.+++++++|. ++++.. .+
T Consensus 88 -~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~--~~ 161 (299)
T 2z2n_A 88 -I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTEN--QN 161 (299)
T ss_dssp -C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEET--TT
T ss_pred -c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeC--CC
Confidence 2 111222234567899999999988888777889999998 5544322 223456789999999986 444432 56
Q ss_pred CeEEEEECCCCceeEE-Ec-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEE-EecCCCCEEEEEEecCCC
Q psy10114 706 RCIRFWNTLTGQPMQC-VD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAK-LTGHSYRVLYLAMSPDGE 782 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~-l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~s-l~gH~~~VtsLafSpDG~ 782 (819)
+.|..||. +++.... .. ....+..++++++|+..++ ...++.|.+||. +++.... ...+...+.+++++++|+
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFV--EIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEE--ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEE--ccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC
Confidence 89999998 6665443 22 3456889999999986665 456789999998 6654322 233456799999999999
Q ss_pred EEEEEeCCCcEEEEECC
Q psy10114 783 AIVTGAGDETLRFWNVF 799 (819)
Q Consensus 783 ~LaSGS~DGtIrIWdl~ 799 (819)
..++...++.|..||..
T Consensus 238 l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 238 LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEeccCCceEEEECCC
Confidence 77766678899999983
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.40 E-value=7.7e-10 Score=122.24 Aligned_cols=257 Identities=11% Similarity=-0.010 Sum_probs=177.1
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecCCceEEEEEecC-------
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVSVAKQVHKLVGH------- 596 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~tgk~i~tl~gH------- 596 (819)
.|.++|..+++... .+.....+ .++++|||+.++++. .++.|.++|..+.+.+.++...
T Consensus 48 ~v~v~D~~t~~~~~--~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGSGSILG--HVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEECCCCeEEE--EecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 78999999988754 34433333 999999999999986 3678999999998888776532
Q ss_pred CCCeEEEEe--CCceeeeccC--CCeEEEEECCCCCccceEE-EecccCCeEEEEECCCC-CEEEEEECCCeEEEEECCC
Q psy10114 597 TARVGALAW--NGDMLSSGSR--DRMILQRDVRTPNSQSERR-LVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 597 s~~V~sLaw--ng~~LaSGS~--DGtI~IWDi~t~~~~~v~~-l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~t 670 (819)
...-..+++ +|++|++++. ++.|.++| .+++. ... +.. .. ++.+.+++ +.+++.+.||++.++|. +
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~ 195 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-A 195 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-C
Confidence 112335666 6788887764 57899999 77653 233 221 11 24445554 45667788999999999 8
Q ss_pred CceeEEEe-----cCCCC-EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--eeEEEcC-----------CCCeEEE
Q psy10114 671 MSPLQTYT-----EHLAA-VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--PMQCVDT-----------GSQVCNL 731 (819)
Q Consensus 671 ~~~i~t~~-----~h~~~-VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l~~-----------~s~V~sL 731 (819)
++...... ....+ .....+.+++..++... .++.+.+.|+.++. .+..+.. ......+
T Consensus 196 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 196 GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV---YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred CcEEEEEeccccccCCcceeecceeEecCCEEEEEc---CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 77663322 11122 12345666666655554 46789999997653 2222211 1224457
Q ss_pred EEccCCCEEEEEEec--------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEEEe-CCCcEEEEECCCC
Q psy10114 732 AWSKHSSELVSTHGY--------SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVTGA-GDETLRFWNVFSK 801 (819)
Q Consensus 732 afSpdg~~LastsGs--------sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaSGS-~DGtIrIWdl~s~ 801 (819)
+++++++.++++... ..+.|.++|..+++.+.++.. .....+++|+|||+ .++++. .++.|.++|..++
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 899999998885321 246899999999999998863 33589999999999 777776 5899999999998
Q ss_pred ceecc
Q psy10114 802 VRSQR 806 (819)
Q Consensus 802 ~~~~k 806 (819)
+....
T Consensus 352 ~vv~~ 356 (373)
T 2mad_H 352 DQDQS 356 (373)
T ss_pred CEEee
Confidence 87655
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-10 Score=121.75 Aligned_cols=228 Identities=13% Similarity=0.082 Sum_probs=158.3
Q ss_pred EEEEec--CC-eEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 517 NLVDWS--SQ-NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 517 ~~ldwS--~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
..+.|+ ++ .++++..++.|+.|+..++ ... +..+...+.+++++++|+++++...++.|.+||..+++.....
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~---~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSP---EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEE---EESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred cCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEE---EECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 445666 44 3556667899999999887 432 3345678999999999998877777789999999888754443
Q ss_pred ecC----CCCeEEEEe--CCceeee----cc-------------CCCeEEEEECCCCCccceEEEecccCCeEEEEECCC
Q psy10114 594 VGH----TARVGALAW--NGDMLSS----GS-------------RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 594 ~gH----s~~V~sLaw--ng~~LaS----GS-------------~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd 650 (819)
... ...+.++++ +|+++++ |+ ..+.|..+|.. ++ ...+..+.....+++|+|+
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---LSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---EEEEECCCSSEEEEEECTT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC---EEEeecCCCCCccEEECCC
Confidence 321 234567888 4666665 33 13456555554 22 2344556677899999999
Q ss_pred CCEEEEEECCCeEEEEECC-CCce---eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC
Q psy10114 651 NQYLASGGNDNRLYVWNLH-SMSP---LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~-t~~~---i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s 726 (819)
++.+++.+.++.|.+||+. +++. ...+..+...+..++++++|...+++ ++.|.+||.. ++.+..+....
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-----~~~v~~~~~~-g~~~~~~~~~~ 256 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-----GDGVHVLTPD-GDELGRVLTPQ 256 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-----TTEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-----CCeEEEECCC-CCEEEEEECCC
Confidence 9998777778999999987 4544 23343345567789999999844432 6889999986 77777775544
Q ss_pred CeEEEEE-ccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 727 QVCNLAW-SKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 727 ~V~sLaf-Spdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
.+.+++| +++++.|++++ . +.+.-++..+.+.
T Consensus 257 ~~~~~~f~~~d~~~L~v~t--~-~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 257 TTSNLCFGGPEGRTLYMTV--S-TEFWSIETNVRGL 289 (296)
T ss_dssp CCCEEEEESTTSCEEEEEE--T-TEEEEEECSCCBC
T ss_pred CceeEEEECCCCCEEEEEc--C-CeEEEEEcccccc
Confidence 4899999 58999888843 3 4566666655543
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.37 E-value=6.7e-11 Score=121.01 Aligned_cols=236 Identities=11% Similarity=-0.002 Sum_probs=157.0
Q ss_pred eEEEEEecCC-eEEE-E-ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 515 YLNLVDWSSQ-NVLS-V-GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 515 yv~~ldwS~~-~LLa-~-g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
....+.++++ .+.. + +.++.|..|+..++..... ...+...+.+++++++|+++++.. ++.|.+||........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL--PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC--CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE--eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee
Confidence 3445555532 3444 4 5678999999866543321 122335688999999998665555 8899999987654332
Q ss_pred EEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
........+.+++++ ++.+++...++.|.++|..+... ..........+.+++++++|+.+++...++.|.+||..
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 222333678899994 56666666788999997654332 11122233467889999999977777778899999987
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCC
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssD 748 (819)
..........+...+.+++++++|. ++++.. .++.|.+||..+......... ...+.+++++++|+..++ ...+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~--~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~--~~~~ 254 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGT-VYVTEH--NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVA--DRGN 254 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCC-EEEEET--TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEE--EGGG
T ss_pred CCceEeecccCCCCceEEEECCCCC-EEEEEC--CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEE--ECCC
Confidence 7664433333346789999999995 555543 578999999876544332222 256899999999985555 6678
Q ss_pred CeEEEEECCCCc
Q psy10114 749 NQILVWKYPTLT 760 (819)
Q Consensus 749 g~I~IWDl~s~k 760 (819)
+.|.+++....+
T Consensus 255 ~~v~~~~~~~~~ 266 (270)
T 1rwi_B 255 DRVVKLTSLEHH 266 (270)
T ss_dssp TEEEEECCCGGG
T ss_pred CEEEEEcCCCcc
Confidence 999999987554
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-10 Score=136.40 Aligned_cols=239 Identities=10% Similarity=0.032 Sum_probs=166.2
Q ss_pred ceEEEEEecC--CeEEEEECC-C----eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCce--------
Q psy10114 514 FYLNLVDWSS--QNVLSVGLG-S----CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGY-------- 578 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~D-g----~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGt-------- 578 (819)
+.+..+.||+ +.++.+..+ | .|++||+.+++..... +. ...+.+++|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-cc--CcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 4567777875 456555443 2 8999999999876532 22 123678999999999999988766
Q ss_pred --------EEEeecCCceE--EEEEe--cCCCCeEEEEe--CCceeeeccC-----CCeEEEEECCC------CCccceE
Q psy10114 579 --------VQVWDVSVAKQ--VHKLV--GHTARVGALAW--NGDMLSSGSR-----DRMILQRDVRT------PNSQSER 633 (819)
Q Consensus 579 --------I~IWDl~tgk~--i~tl~--gHs~~V~sLaw--ng~~LaSGS~-----DGtI~IWDi~t------~~~~~v~ 633 (819)
|.+|++.+++. ...+. .|...+.+++| +|+.|+.++. +..|.+||+.+ +.. ...
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~ 280 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWV 280 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceE
Confidence 99999987652 22233 35566788888 5667766543 67899999976 431 235
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCC----eEEEEECCCCce--eEEEecCCC--CEEEEEEcCCCCeEEEEEccCCC
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDN----RLYVWNLHSMSP--LQTYTEHLA--AVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DG----tI~IWDl~t~~~--i~t~~~h~~--~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.+..+...+.. .|+++|+.|+..++++ .|.+||+.+++. ...+..+.. .+..++|++++ .++++.. .|
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~--~~ 356 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYL--HD 356 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEE--ET
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEE--EC
Confidence 56666666655 4889999888777643 699999987752 345555543 68889998654 4666554 56
Q ss_pred C--eEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEE--ecCCCeEEEEECCCCc
Q psy10114 706 R--CIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTH--GYSQNQILVWKYPTLT 760 (819)
Q Consensus 706 g--tIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~Lasts--GssDg~I~IWDl~s~k 760 (819)
+ .|.+||+.+|+.+..+.. ...+..+.++++++.++... ....+.+..||+.+++
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6 467788877877666653 45578899999998877642 2345789999998876
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-10 Score=122.88 Aligned_cols=233 Identities=10% Similarity=0.064 Sum_probs=167.2
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCC-CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCC-CCeE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADG-NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT-ARVG 601 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~-~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs-~~V~ 601 (819)
+.+++++.++.|++||.++|+... ++..+. ..+.+++++|+|++++ +.++.|..||. +++.+.++..+. ..+.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w--~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVW--EYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEE--EEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEE--EeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 456777788999999999998764 444443 4688999999999888 45678999999 899999998653 4677
Q ss_pred EEEe--CCceeeeccC-CCeEEEEECCCCCccceEEEe----cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee
Q psy10114 602 ALAW--NGDMLSSGSR-DRMILQRDVRTPNSQSERRLV----GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674 (819)
Q Consensus 602 sLaw--ng~~LaSGS~-DGtI~IWDi~t~~~~~v~~l~----gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i 674 (819)
++.+ +|+.+++.+. ++.+..+|.. ++......+. .+......++..++|+++++.+.++.|..||.+ ++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 7777 6888888777 7888888763 3321111111 122345566789999999999999999999998 9999
Q ss_pred EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-------CCeEEEEEccCCCEEEEEEecC
Q psy10114 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-------SQVCNLAWSKHSSELVSTHGYS 747 (819)
Q Consensus 675 ~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-------s~V~sLafSpdg~~LastsGss 747 (819)
.++... ....++...+++..+++.. .++.|..+|..+|+.+.++... ..+..++..++|+.+++...+.
T Consensus 159 w~~~~~-~~~~~~~~~~~g~~~v~~~---~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~ 234 (276)
T 3no2_A 159 NSVKLS-GTPFSSAFLDNGDCLVACG---DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 234 (276)
T ss_dssp EEEECS-SCCCEEEECTTSCEEEECB---TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTT
T ss_pred EEEECC-CCccceeEcCCCCEEEEeC---CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCc
Confidence 988764 3456678889988665533 5678999999999999888421 1267888888988887732111
Q ss_pred C------CeEEEEEC-CCCcEEEEEec
Q psy10114 748 Q------NQILVWKY-PTLTQVAKLTG 767 (819)
Q Consensus 748 D------g~I~IWDl-~s~k~l~sl~g 767 (819)
. +..+++++ ++++.+.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 235 DREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp CTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred cccccccCCceEEEECCCCCEEEEecC
Confidence 1 23344444 45666666553
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.5e-09 Score=108.18 Aligned_cols=238 Identities=12% Similarity=0.030 Sum_probs=169.7
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEE-EecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCC
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK-LVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t-l~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~ 627 (819)
+......+.+++++++|+..++...++.|.+||.. ++.... +......+.+++++ ++..++...++.|..+|.. +
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 44445788999999999988777778999999988 554332 22334678899984 5566666667889999987 4
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE-EEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ-TYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~-t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
+. ...........+.++++.++|+.+++...++.|..+|.. ++... .+......+.+++++++++ ++++.. .++
T Consensus 93 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~--~~~ 167 (300)
T 2qc5_A 93 GF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTEN--QNN 167 (300)
T ss_dssp CE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEET--TTT
T ss_pred Ce-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEec--CCC
Confidence 32 112222234678999999999988877778899999987 55432 2233456789999999998 555442 478
Q ss_pred eEEEEECCCCceeEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEE-EecCCCCEEEEEEecCCCE
Q psy10114 707 CIRFWNTLTGQPMQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAK-LTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~s-l~gH~~~VtsLafSpDG~~ 783 (819)
.|..+|. +++..... .....+..++++++|+..++ ....+.|.++|. +++.... +..+...+.+++++++|+.
T Consensus 168 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 168 SIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFV--EIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEI 243 (300)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEE--ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCE
T ss_pred eEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEE--ccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCE
Confidence 8999998 55544322 22356889999999976665 455678999998 4444332 2334567899999999997
Q ss_pred EEEEeCCCcEEEEECC
Q psy10114 784 IVTGAGDETLRFWNVF 799 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~ 799 (819)
.++...++.|..++..
T Consensus 244 ~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 244 WFTEWGANQIGRITND 259 (300)
T ss_dssp EEEETTTTEEEEECTT
T ss_pred EEeccCCCeEEEECCC
Confidence 7776677899999984
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-09 Score=122.29 Aligned_cols=233 Identities=9% Similarity=-0.000 Sum_probs=165.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCC--eEEEEECCCCCccc
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDR--MILQRDVRTPNSQS 631 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DG--tI~IWDi~t~~~~~ 631 (819)
.....++|+++|+++++...++.|++||.++++........... . ++| +++.|++++.++ .|..+|......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-- 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-- 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC--
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCCce--
Confidence 46889999999997777777899999999888766655543322 2 777 566777777655 788888765442
Q ss_pred eEEE---ec-ccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE----EecCCCCE--EEEEEcCCCCeEEEEEc
Q psy10114 632 ERRL---VG-HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT----YTEHLAAV--KAIAWSPHHHGLLASGG 701 (819)
Q Consensus 632 v~~l---~g-H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t----~~~h~~~V--tsLafSPdg~~LLaSGg 701 (819)
...+ .. ....+.+++++|++..|+.+..++.|+.||..++..... ..+....- ..++|+|++..++++..
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 1222 12 446678899999655666677788999999987763222 11222222 28999997777777764
Q ss_pred cCCCCeEEEEECCCCceeEEEcCC---------------CCeEEEEEccCCCEEEEEEec-CCCeEEEEECCCCcEEEEE
Q psy10114 702 GTADRCIRFWNTLTGQPMQCVDTG---------------SQVCNLAWSKHSSELVSTHGY-SQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v~~l~~~---------------s~V~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k~l~sl 765 (819)
.++.|+.||.... ........ .....++++++|+..++ .. .++.|+.|+..+++ +..+
T Consensus 287 --~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva--d~~~~~~I~~~~~~~G~-v~~~ 360 (409)
T 3hrp_A 287 --NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV--DGFKGYCLRKLDILDGY-VSTV 360 (409)
T ss_dssp --TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE--ETTTTCEEEEEETTTTE-EEEE
T ss_pred --CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE--eCCCCCEEEEEECCCCE-EEEE
Confidence 6889999997643 22222221 34789999999995555 56 78899999987775 4445
Q ss_pred ecC---------------CCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 766 TGH---------------SYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 766 ~gH---------------~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.++ -....+++++++|.++++-..++.|+.+++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 444 245899999999988888888899988775
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.30 E-value=2.7e-09 Score=112.70 Aligned_cols=225 Identities=12% Similarity=0.144 Sum_probs=155.0
Q ss_pred CCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccc
Q psy10114 555 GNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 555 ~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~ 631 (819)
..-..+..|++++ .++++...++.|..||.++++. ..+. ....+.++++ +++ ++++. ++.|.++|..+++...
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEE
Confidence 4456789999965 5566666789999999987765 3332 4567899999 455 44444 5679999988765322
Q ss_pred eEEEec--ccCCeEEEEECCCCCEEEEEECC-----------CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 632 ERRLVG--HRQEVCGLKWSPDNQYLASGGND-----------NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 632 v~~l~g--H~~~VtsLafSpdg~~LaSGS~D-----------GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
...... ....+.+++++++|+.+++...+ +.|..+|.. ++. ..+.........++|+|+++.+++
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~-~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHV-KKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCE-EEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCE-EEEeeccccccceEEcCCCCEEEE
Confidence 222111 12357889999999976654321 344444432 333 333334455689999999998888
Q ss_pred EEccCCCCeEEEEEC--CCCcee--E---EEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC
Q psy10114 699 SGGGTADRCIRFWNT--LTGQPM--Q---CVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY 770 (819)
Q Consensus 699 SGgGs~DgtIrIWDl--~tg~~v--~---~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~ 770 (819)
+.. .++.|..||+ .+|... . .+. .......++++++|+..++ ....+.|..||..+++.+..+..+..
T Consensus 166 ~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva--~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 166 IDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA--CYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE--EETTTEEEEECTTTCCEEEEEECSSS
T ss_pred ecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE--EcCCCEEEEEcCCCceEEEEEECCCC
Confidence 765 6789999987 455432 1 111 2345789999999987666 45678899999998999999988878
Q ss_pred CEEEEEEe-cCCCEEEEEeC
Q psy10114 771 RVLYLAMS-PDGEAIVTGAG 789 (819)
Q Consensus 771 ~VtsLafS-pDG~~LaSGS~ 789 (819)
.+++++|. ||++.|..++.
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEeCCCCCEEEEEcC
Confidence 89999998 88887665443
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.8e-10 Score=134.65 Aligned_cols=200 Identities=11% Similarity=0.043 Sum_probs=139.0
Q ss_pred cCCCCeEEEEe--CCceee-----eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCe-----
Q psy10114 595 GHTARVGALAW--NGDMLS-----SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNR----- 662 (819)
Q Consensus 595 gHs~~V~sLaw--ng~~La-----SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGt----- 662 (819)
+|...+.+++| +|+.|+ .|+.+..|++||+.+++......+... ...+++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCcc
Confidence 34556888889 577887 677778999999998764201111111 1267899999999999998776
Q ss_pred --------EEEEECCCCce----eEEEecCCCCEEEEEEcCCCCeEEEEEccC-CCCeEEEEECCCCceeEEEcCCCCeE
Q psy10114 663 --------LYVWNLHSMSP----LQTYTEHLAAVKAIAWSPHHHGLLASGGGT-ADRCIRFWNTLTGQPMQCVDTGSQVC 729 (819)
Q Consensus 663 --------I~IWDl~t~~~----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs-~DgtIrIWDl~tg~~v~~l~~~s~V~ 729 (819)
|++|++.+++. +.....+...+.+++|+|+|+.+++++... ....|.++|..+++..........+.
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY 275 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE
Confidence 99999988762 222334556789999999999888776411 12377888776666555445555566
Q ss_pred EEEEccCCCEEEEEEec--CCCeEEEEECCCCcE--EEEEecC--CCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 730 NLAWSKHSSELVSTHGY--SQNQILVWKYPTLTQ--VAKLTGH--SYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 730 sLafSpdg~~LastsGs--sDg~I~IWDl~s~k~--l~sl~gH--~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
...+ ++|+ ++..+.. .++.|.+||+.+++. ...+..+ ...+.+++++ ++.++++...|+..++|.+.
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 6666 6777 6554321 368999999987653 2334433 4457888998 77788899999998888665
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.4e-09 Score=114.87 Aligned_cols=243 Identities=8% Similarity=-0.011 Sum_probs=165.8
Q ss_pred EEecCCeEEEEE----------CCCeEEEEEcCCCceEEEEeccCC-----CCCeEEEEEcCCCCEEEEEec--CceEEE
Q psy10114 519 VDWSSQNVLSVG----------LGSCVYLWSACTSQVTRLCDLSAD-----GNSVTSVAWNERGNLVAVGTH--HGYVQV 581 (819)
Q Consensus 519 ldwS~~~LLa~g----------~Dg~V~LWd~~tg~~~~l~~l~~h-----~~~VtsLafSpdG~~LAsGs~--DGtI~I 581 (819)
++.+++.+..+. .++.|.++|..+.+......+.+. ......++|+|||++|+++.. ++.|.+
T Consensus 73 ~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~v 152 (373)
T 2mad_H 73 AAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGL 152 (373)
T ss_pred ECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEE
Confidence 455566666664 367899999998877654444310 123458999999999999874 578999
Q ss_pred eecCCceEEEE-EecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEE---EecccCC-eEEEEECCCCCEEEE
Q psy10114 582 WDVSVAKQVHK-LVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR---LVGHRQE-VCGLKWSPDNQYLAS 656 (819)
Q Consensus 582 WDl~tgk~i~t-l~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~---l~gH~~~-VtsLafSpdg~~LaS 656 (819)
+| ++++.+.+ +... +.+....+.+..+++.+.||.+.++|. +++...... ....... .....+.+++..++.
T Consensus 153 iD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 229 (373)
T 2mad_H 153 VV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVW 229 (373)
T ss_pred EE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEE
Confidence 99 99988877 5432 222222224456777888999999999 654321111 0011111 123456666666555
Q ss_pred EECCCeEEEEECCCCc--eeEEEec----------CCCCEEEEEEcCCCCeEEEEEccC-------CCCeEEEEECCCCc
Q psy10114 657 GGNDNRLYVWNLHSMS--PLQTYTE----------HLAAVKAIAWSPHHHGLLASGGGT-------ADRCIRFWNTLTGQ 717 (819)
Q Consensus 657 GS~DGtI~IWDl~t~~--~i~t~~~----------h~~~VtsLafSPdg~~LLaSGgGs-------~DgtIrIWDl~tg~ 717 (819)
.+.++.+.+.|+.++. .+..+.. .......++++|+++.++++.... .++.|.++|+.+++
T Consensus 230 ~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~ 309 (373)
T 2mad_H 230 PVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ 309 (373)
T ss_pred EcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE
Confidence 5678899999997653 2222221 123344578999999888865310 13689999999999
Q ss_pred eeEEEcCCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 718 PMQCVDTGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 718 ~v~~l~~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
.+..+..+....+++|+|||+ .++++ ...++.|.++|..+++.+.++
T Consensus 310 vv~~i~~g~~p~~i~~s~Dg~~~l~v~-~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 310 TSSQISLGHDVDAISVAQDGGPDLYAL-SAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEEECCCCcCeEEECCCCCeEEEEE-cCCCCeEEEEECCCCCEEeee
Confidence 999998888899999999999 56653 446899999999999999884
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-10 Score=125.69 Aligned_cols=272 Identities=14% Similarity=0.066 Sum_probs=182.1
Q ss_pred cCCeEEEEEC-----CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecCC
Q psy10114 522 SSQNVLSVGL-----GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVSV 586 (819)
Q Consensus 522 S~~~LLa~g~-----Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~t 586 (819)
+++.+..... ++.|.+.|..+++....... ...+ . ++++|||++++++. .++.|.+||..+
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 3444444443 57899999999987664443 2333 4 99999999888875 367899999999
Q ss_pred ceEEEEEecCC-------CCeEEEEe--CCceeeeccC--CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE
Q psy10114 587 AKQVHKLVGHT-------ARVGALAW--NGDMLSSGSR--DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA 655 (819)
Q Consensus 587 gk~i~tl~gHs-------~~V~sLaw--ng~~LaSGS~--DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La 655 (819)
++.+.++.-.. ..-..+++ +|++++++.. ++.|.++|..+.+. +.++... + +...+....+.++
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v--v~tI~v~-g--~~~~~P~g~~~~~ 193 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF--KRMLDVP-D--CYHIFPTAPDTFF 193 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEECC-S--EEEEEEEETTEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE--EEEEECC-C--cceeecCCCceeE
Confidence 99988875321 12334666 6777777653 68999999998663 2333221 1 1233333456777
Q ss_pred EEECCCeEEEEECCC-CceeEEEecC----CCCEE-EEEEc-CCCCeEEEEEccCCCCeEEEEECCCCce--eEEEc---
Q psy10114 656 SGGNDNRLYVWNLHS-MSPLQTYTEH----LAAVK-AIAWS-PHHHGLLASGGGTADRCIRFWNTLTGQP--MQCVD--- 723 (819)
Q Consensus 656 SGS~DGtI~IWDl~t-~~~i~t~~~h----~~~Vt-sLafS-Pdg~~LLaSGgGs~DgtIrIWDl~tg~~--v~~l~--- 723 (819)
+.+.||++.+.++.+ ++.......+ ...+. ..+|. ++|+.++++ .+|.+.+.|+.++.. ...+.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs----~~g~V~v~d~~~~~~~v~~~~~~~~ 269 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT----YTGKIHQIDLSSGDAKFLPAVEALT 269 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB----TTSEEEEEECTTSSCEECCCEESSC
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe----CCCEEEEEECCCCcceeecceeccc
Confidence 888899999999876 5543222111 11221 23553 677655543 579999999976642 22221
Q ss_pred -----C---CCCeEEEEEccCCCEEEEEEec--------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEE
Q psy10114 724 -----T---GSQVCNLAWSKHSSELVSTHGY--------SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVT 786 (819)
Q Consensus 724 -----~---~s~V~sLafSpdg~~LastsGs--------sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaS 786 (819)
. ......++++++++.++++... ..+.|.++|..+++.+..+..- .++.++++++|++ .|++
T Consensus 270 ~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 270 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp HHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEE
T ss_pred cccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEE
Confidence 0 1233457779999999986431 1357999999999999888633 3678999999997 6666
Q ss_pred E-eCCCcEEEEECCCCceeccc
Q psy10114 787 G-AGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 787 G-S~DGtIrIWdl~s~~~~~k~ 807 (819)
+ ..++.|.++|..+++.....
T Consensus 349 tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 349 LSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp EETTTTEEEEEETTTCCEEEEE
T ss_pred EcCCCCeEEEEECCCCcEEEEe
Confidence 4 45899999999998765443
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.8e-10 Score=133.96 Aligned_cols=243 Identities=16% Similarity=0.207 Sum_probs=164.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-----cCceEEEeecCCceEEEE-EecCCCCeEEEEe-CCceeeeccCCC---------
Q psy10114 554 DGNSVTSVAWNERGNLVAVGT-----HHGYVQVWDVSVAKQVHK-LVGHTARVGALAW-NGDMLSSGSRDR--------- 617 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs-----~DGtI~IWDl~tgk~i~t-l~gHs~~V~sLaw-ng~~LaSGS~DG--------- 617 (819)
+...+.+++|||||++||.+. .+..|+++|+++++.+.. +.+. ...+++| +++.|+.++.++
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~WsDg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWLGNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEETTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEeCCCEEEEEEecCccccccccc
Confidence 445788899999999998543 335799999999986543 2221 1234556 677787777663
Q ss_pred ----eEEEEECCCCCccceEEE--ec-ccCCeEEEEECCCCCEEEEEEC----CCeEEEEECCCCc-eeEEEecCCCCEE
Q psy10114 618 ----MILQRDVRTPNSQSERRL--VG-HRQEVCGLKWSPDNQYLASGGN----DNRLYVWNLHSMS-PLQTYTEHLAAVK 685 (819)
Q Consensus 618 ----tI~IWDi~t~~~~~v~~l--~g-H~~~VtsLafSpdg~~LaSGS~----DGtI~IWDl~t~~-~i~t~~~h~~~Vt 685 (819)
.|++|++.++........ .. |...+.++.|+|||++|+.... ++.|+++|+.++. ....+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 499999987654322322 22 4445788999999998865443 3589999998764 4556666666655
Q ss_pred EEEEcCCCCeEEEEEcc-CCCCeEEEEECCCCce---eEEEcCCCCeEEEEEccCCCEEEEEEecCCC--eEEEEECCCC
Q psy10114 686 AIAWSPHHHGLLASGGG-TADRCIRFWNTLTGQP---MQCVDTGSQVCNLAWSKHSSELVSTHGYSQN--QILVWKYPTL 759 (819)
Q Consensus 686 sLafSPdg~~LLaSGgG-s~DgtIrIWDl~tg~~---v~~l~~~s~V~sLafSpdg~~LastsGssDg--~I~IWDl~s~ 759 (819)
.. ++++|..+++.+.. ...+.|..+|+.++.. ...+.+...+. .|+++++.++... ..++ .|.+||...
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~-~~~g~~~l~~~d~~g- 359 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY-MVDATARVEQFDYEG- 359 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE-EETTEEEEEEECTTS-
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE-EECCeeEEEEEECCC-
Confidence 55 67777777776541 1247899999988764 33344444444 8999999988753 3444 688898874
Q ss_pred cEEEEEe-cCCCCEEEEEEecCCCEEEEEeCC----CcEEEEECCCCce
Q psy10114 760 TQVAKLT-GHSYRVLYLAMSPDGEAIVTGAGD----ETLRFWNVFSKVR 803 (819)
Q Consensus 760 k~l~sl~-gH~~~VtsLafSpDG~~LaSGS~D----GtIrIWdl~s~~~ 803 (819)
.....+. ...+.+..++++++++.++....+ +++..||+.+++.
T Consensus 360 ~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 4445554 344567788888888877655544 7899999987653
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-09 Score=110.32 Aligned_cols=219 Identities=11% Similarity=0.109 Sum_probs=148.1
Q ss_pred ECCCeEEEEEcCCCceEEEEe--ccCCCCCeEEEEEcCC-CCEEEEEecCceEEEeecCCceEEEE-Eec----CCCCeE
Q psy10114 530 GLGSCVYLWSACTSQVTRLCD--LSADGNSVTSVAWNER-GNLVAVGTHHGYVQVWDVSVAKQVHK-LVG----HTARVG 601 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~--l~~h~~~VtsLafSpd-G~~LAsGs~DGtI~IWDl~tgk~i~t-l~g----Hs~~V~ 601 (819)
..++.|..||..+++...... ..++...+.+++++++ |++++ ++.++.|.+||.+ ++.... ... ....+.
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~ 120 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCN 120 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCC
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCc
Confidence 677899999988888754322 0123467899999999 65444 4444478999988 665433 221 123577
Q ss_pred EEEeC--CceeeeccCC---------------CeEEEEECCCCCccceEEEecccCCeEEEEEC----CCCCEEEEE-EC
Q psy10114 602 ALAWN--GDMLSSGSRD---------------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWS----PDNQYLASG-GN 659 (819)
Q Consensus 602 sLawn--g~~LaSGS~D---------------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafS----pdg~~LaSG-S~ 659 (819)
+++++ ++.+++...+ +.|..+|.. ++ ...+..+.....+++++ ++++.+..+ ..
T Consensus 121 ~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~ 196 (314)
T 1pjx_A 121 DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ---MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP 196 (314)
T ss_dssp EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC---EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC---EEEeccCCCCcceEEEecccCCCCCEEEEEECC
Confidence 88884 5566555544 567777765 32 12233344567899999 999766555 56
Q ss_pred CCeEEEEECC-CCc-----eeEEEecCC-CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-CCeEEE
Q psy10114 660 DNRLYVWNLH-SMS-----PLQTYTEHL-AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-SQVCNL 731 (819)
Q Consensus 660 DGtI~IWDl~-t~~-----~i~t~~~h~-~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-s~V~sL 731 (819)
++.|.+||.+ +++ ....+..+. .....++++++|..+++.. .++.|.+||..+++.+..+... ..+.++
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~---~~~~i~~~d~~~g~~~~~~~~~~~~~~~i 273 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW---GSSHIEVFGPDGGQPKMRIRCPFEKPSNL 273 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE---TTTEEEEECTTCBSCSEEEECSSSCEEEE
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc---CCCEEEEEcCCCCcEeEEEeCCCCCceeE
Confidence 7899999986 443 222233333 5688999999997555443 4789999999878776666544 679999
Q ss_pred EEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 732 AWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 732 afSpdg~~LastsGssDg~I~IWDl~s 758 (819)
+++++++.++++ ...++.|..++...
T Consensus 274 ~~~~dg~~l~v~-~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 274 HFKPQTKTIFVT-EHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTSSEEEEE-ETTTTEEEEEECSS
T ss_pred EECCCCCEEEEE-eCCCCeEEEEeCCC
Confidence 999999977664 44567899998764
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=8.2e-09 Score=110.84 Aligned_cols=221 Identities=10% Similarity=0.017 Sum_probs=150.9
Q ss_pred CeEEEEEcCCC-CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 557 SVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 557 ~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
-..+.+|++++ ..++++..++.|..||.++++.. .+. ....+.+++| +++++++ +.+ .|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEEEEe
Confidence 34678899975 45666667889999999877643 333 3567899998 4555554 444 4899998776532211
Q ss_pred EEec--ccCCeEEEEECCCCCEEEEEEC------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 634 RLVG--HRQEVCGLKWSPDNQYLASGGN------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 634 ~l~g--H~~~VtsLafSpdg~~LaSGS~------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.... ....+.+++++++|+.+++... .+.|..+| +++. ..+.........++|+|+++.++++.. .+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~--~~ 200 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDT--KV 200 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEET--TT
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEEC--CC
Confidence 1111 1235889999999997665542 24666666 4443 333333445789999999998877754 67
Q ss_pred CeEEEEECC--CC-ce-----eEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEE
Q psy10114 706 RCIRFWNTL--TG-QP-----MQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA 776 (819)
Q Consensus 706 gtIrIWDl~--tg-~~-----v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLa 776 (819)
+.|.+||.. +| +. ...+. .......++++++|+..++ ...++.|..||. +++.+..+..+...+++++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva--~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~a 277 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA--RWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA 277 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE--EETTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEE--EeCCCEEEEECC-CCCEEEEEECCCCCcEEEE
Confidence 899999986 55 32 22222 2345788999999987766 345688999997 6777788887777899999
Q ss_pred Ee-cCCCEEEEEeC
Q psy10114 777 MS-PDGEAIVTGAG 789 (819)
Q Consensus 777 fS-pDG~~LaSGS~ 789 (819)
|+ +|++.|+.++.
T Consensus 278 f~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 278 FIGPDASRLLVTSA 291 (326)
T ss_dssp EESTTSCEEEEEEB
T ss_pred EecCCCCEEEEEec
Confidence 98 88887755544
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.7e-08 Score=109.23 Aligned_cols=272 Identities=10% Similarity=0.020 Sum_probs=178.2
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCC-------CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSAD-------GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h-------~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
.++.+++++.++.|+.+|..+++..-....... ...+.+. ...++..+++++.+|.|..+|.++|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 467788888889999999999987644444321 1223222 22246688889999999999999999988776
Q ss_pred cCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccC---CeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 595 GHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ---EVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 595 gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~---~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
............++.++.++.++.+..+|.++++............ ....... ++..++.++.++.|..+|.+++
T Consensus 131 ~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 131 VAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp CSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTC
T ss_pred CCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCC
Confidence 5443333334456788888999999999998876432222111100 0011111 2457888888999999999999
Q ss_pred ceeEEEecCCCC----EEE---EEEcC--CCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEE
Q psy10114 672 SPLQTYTEHLAA----VKA---IAWSP--HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 672 ~~i~t~~~h~~~----Vts---LafSP--dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Las 742 (819)
+.+......... +.. +.-.| .+..+++. + .++.+..+|..+|+.+....... ...+.. ++..+++
T Consensus 209 ~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~-~--~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~ 282 (376)
T 3q7m_A 209 QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFAL-A--YNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIYL 282 (376)
T ss_dssp CEEEEEECCC-----------CCCCCCEEETTEEEEE-C--TTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEEE
T ss_pred cEEEEEecccCCCCcccccccccCCCcEEECCEEEEE-e--cCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEEE
Confidence 988776532110 000 00111 13334443 2 68999999999999887766433 344443 4566776
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecC-CCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGH-SYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH-~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+..++.+..+|..+++.+...... ...+..... .+..|+.++.+|.|..+|..+++...+
T Consensus 283 --~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 283 --VDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp --EETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred --EcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 557889999999999988777622 222333333 356788899999999999999876543
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.20 E-value=1.6e-09 Score=120.70 Aligned_cols=257 Identities=11% Similarity=0.025 Sum_probs=176.0
Q ss_pred EEEecCCeEEEEE----------CCCeEEEEEcCCCceEEEEeccCC-----CCCeEEEEEcCCCCEEEEEec--CceEE
Q psy10114 518 LVDWSSQNVLSVG----------LGSCVYLWSACTSQVTRLCDLSAD-----GNSVTSVAWNERGNLVAVGTH--HGYVQ 580 (819)
Q Consensus 518 ~ldwS~~~LLa~g----------~Dg~V~LWd~~tg~~~~l~~l~~h-----~~~VtsLafSpdG~~LAsGs~--DGtI~ 580 (819)
.++.+++.+..+. .++.|.+||..+.+......+... ......++++|||++++++.. ++.|.
T Consensus 84 a~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~Vs 163 (386)
T 3sjl_D 84 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVG 163 (386)
T ss_dssp EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEE
Confidence 4555666665554 357899999999987765544321 124567999999999998874 68999
Q ss_pred EeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecc----cCCeE-EEEEC-CCCCE
Q psy10114 581 VWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGH----RQEVC-GLKWS-PDNQY 653 (819)
Q Consensus 581 IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH----~~~Vt-sLafS-pdg~~ 653 (819)
++|+.+++.+.++.... ...+.- ....+++.+.||.+.+.+........ .....+ ...+. ...|. ++|++
T Consensus 164 VID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~-~~~~~~~~~~~~~~~~~~~~~~~dG~~ 240 (386)
T 3sjl_D 164 VVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE-ITHTEVFHPEDEFLINHPAYSQKAGRL 240 (386)
T ss_dssp EEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCE-EEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred EEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEEEECCCCCeEE-EeecceeccccccccccceeEcCCCcE
Confidence 99999999999886422 111212 45567788889999999987632221 111111 11121 23554 56654
Q ss_pred EEEEECCCeEEEEECCCCc--eeEEEe----------cCCCCEEEEEEcCCCCeEEEEEcc----C---CCCeEEEEECC
Q psy10114 654 LASGGNDNRLYVWNLHSMS--PLQTYT----------EHLAAVKAIAWSPHHHGLLASGGG----T---ADRCIRFWNTL 714 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t~~--~i~t~~----------~h~~~VtsLafSPdg~~LLaSGgG----s---~DgtIrIWDl~ 714 (819)
+ ..+.+|.|.+.|..+.. .+..+. -..+....++++++++.++++... + ..+.|.+.|+.
T Consensus 241 ~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~ 319 (386)
T 3sjl_D 241 V-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 319 (386)
T ss_dssp E-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred E-EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC
Confidence 4 46678999999997654 222222 012233457789999988886420 0 12579999999
Q ss_pred CCceeEEEcCCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 715 TGQPMQCVDTGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 715 tg~~v~~l~~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
+++.+..+..+..+.++++++|++ .++++ ...++.|.++|..+++.+.++..- +.-..+.+++|
T Consensus 320 t~kv~~~i~vg~~~~~lavs~D~~~~ly~t-n~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 320 TGERLAKFEMGHEIDSINVSQDEKPLLYAL-STGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp TCCEEEEEEEEEEECEEEECSSSSCEEEEE-ETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCeEEEEEECCCCcceEEECCCCCeEEEEE-cCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 999999998888899999999997 66664 456899999999999999988743 33455667666
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.2e-09 Score=113.67 Aligned_cols=230 Identities=13% Similarity=0.078 Sum_probs=156.2
Q ss_pred CCCCeEEEEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCcc
Q psy10114 554 DGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 554 h~~~VtsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
.........|+++|+ +++++..++.|..|+. +++ ...+..+...+..++++ |+++++...++.|..+|.. ++..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence 345677899999998 6677777899999998 444 45555667788899994 5555555566889999975 3321
Q ss_pred ceEE-Eecc-cCCeEEEEECCCCCEEEE----EEC-------------CCeEEEEECCCCceeEEEecCCCCEEEEEEcC
Q psy10114 631 SERR-LVGH-RQEVCGLKWSPDNQYLAS----GGN-------------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691 (819)
Q Consensus 631 ~v~~-l~gH-~~~VtsLafSpdg~~LaS----GS~-------------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP 691 (819)
.... ..+. ...+.+++++++|+..++ |.. .+.|..+|..+++..... .......++|+|
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp 197 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP 197 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECT
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC
Confidence 1111 1111 134678999999998886 332 256888888777654333 445668899999
Q ss_pred CCCeEEEEEccC---CCCeEEEEECCCCcee--EEE-c-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEE
Q psy10114 692 HHHGLLASGGGT---ADRCIRFWNTLTGQPM--QCV-D-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAK 764 (819)
Q Consensus 692 dg~~LLaSGgGs---~DgtIrIWDl~tg~~v--~~l-~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~s 764 (819)
+++.++++.... .++.|..||+..+... ..+ . .......++++++|+..++ . .+.|.+|+. +++.+..
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~---~-~~gv~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS---S-GTGVCVFDS-DGQLLGH 272 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC---C-SSEEEEECT-TSCEEEE
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe---c-CCcEEEECC-CCCEEEE
Confidence 999887765310 0378999998765411 111 1 2334567899999994443 2 345999997 6777777
Q ss_pred EecCCCCEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 765 l~gH~~~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
+..+. .+.+++|+++++.|..++.++..+
T Consensus 273 ~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 273 IPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 77655 588999999999888888765433
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.9e-08 Score=106.48 Aligned_cols=264 Identities=12% Similarity=0.024 Sum_probs=174.0
Q ss_pred EEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecC
Q psy10114 517 NLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGH 596 (819)
Q Consensus 517 ~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gH 596 (819)
......++.+++++.++.|+.+|..+|+..-........ ....... +..+++++.+|.|..+|.++|+.+......
T Consensus 97 ~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--LSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--CSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred cCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--EcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 334446788999999999999999999876544443221 1111222 458888999999999999999988877653
Q ss_pred CCCe-----EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccC-----CeEEEEECC--CCCEEEEEECCCeEE
Q psy10114 597 TARV-----GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ-----EVCGLKWSP--DNQYLASGGNDNRLY 664 (819)
Q Consensus 597 s~~V-----~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~-----~VtsLafSp--dg~~LaSGS~DGtI~ 664 (819)
.... ......++.++.++.++.+..+|..+++............ .+..+.-.| .+..++.++.++.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 173 MPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLT 252 (376)
T ss_dssp C-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEE
T ss_pred CCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEE
Confidence 3221 2233346778888999999999998876432222211100 000011111 356788888899999
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-C-CCeEEEEEccCCCEEEE
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-G-SQVCNLAWSKHSSELVS 742 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~-s~V~sLafSpdg~~Las 742 (819)
.+|.++++.+..... .....+... +..+++.. .++.+..+|..+|+.+..... . ........ .+..+++
T Consensus 253 ~~d~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~---~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v 323 (376)
T 3q7m_A 253 ALDLRSGQIMWKREL--GSVNDFIVD--GNRIYLVD---QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVV 323 (376)
T ss_dssp EEETTTCCEEEEECC--CCEEEEEEE--TTEEEEEE---TTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEE
T ss_pred EEECCCCcEEeeccC--CCCCCceEE--CCEEEEEc---CCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEE
Confidence 999999998876652 334444443 44455543 688999999999998877652 2 22333333 2456777
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCCCEEE-EEEecCCCEEEEEeCCCcEEEEE
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLY-LAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH~~~Vts-LafSpDG~~LaSGS~DGtIrIWd 797 (819)
+..+|.+..+|..+++.+.........+.. ... .+..|+.++.||.|..|+
T Consensus 324 --~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 324 --GDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp --ECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred --EeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 677899999999999998887754333332 222 245788899999999987
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-10 Score=128.57 Aligned_cols=271 Identities=13% Similarity=0.079 Sum_probs=178.3
Q ss_pred EEEEEecC--CeEEEEECCCeEEEEEcCCCc---------eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeec
Q psy10114 516 LNLVDWSS--QNVLSVGLGSCVYLWSACTSQ---------VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDV 584 (819)
Q Consensus 516 v~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~---------~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl 584 (819)
++++++++ +.+++++.+ .+.+|+..+.+ ........ ..+ |+.++| |++.|+++ .+|.|++||+
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 45566664 456666665 67779865432 21111122 345 999999 99999999 8899999999
Q ss_pred CCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 585 SVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 585 ~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
.+.........|...+.++.+....+++++.||.+.+||+.++... .+...|++++|||+| ++.|..||+++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~------~~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTK------QLAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE------EEEESEEEEEECSSE--EEEEETTSCEE
T ss_pred hhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCccc------cccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 8877777777888889999885545899999999999999876532 145689999999999 78899999999
Q ss_pred EEECCCCce--eEEE------e---cCCCCEEEEEEcCCCCeEEEEEccC---C-----CCeEEEEECCCCcee-EEE-c
Q psy10114 665 VWNLHSMSP--LQTY------T---EHLAAVKAIAWSPHHHGLLASGGGT---A-----DRCIRFWNTLTGQPM-QCV-D 723 (819)
Q Consensus 665 IWDl~t~~~--i~t~------~---~h~~~VtsLafSPdg~~LLaSGgGs---~-----DgtIrIWDl~tg~~v-~~l-~ 723 (819)
+|+...++. ..++ . +|...|.+|.|.+++..+++-+... . +..+.+.+...+... +.+ +
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~~~~~~~f~~~~d 265 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQETFD 265 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEEEETTEEEEEEESS
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEEcCCCCceeEcccc
Confidence 999887775 5566 3 3778999999999988776544311 1 225667663233221 222 1
Q ss_pred ----CCC-----C---eEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-------------cCCCCEEEEEEe
Q psy10114 724 ----TGS-----Q---VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-------------GHSYRVLYLAMS 778 (819)
Q Consensus 724 ----~~s-----~---V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-------------gH~~~VtsLafS 778 (819)
.+. . ..--.|.|+.+.++.++......|-+++-. +.+..+. +.+....++++.
T Consensus 266 ~~~~fg~~~R~~~~~~~~l~~w~~~~~~l~iv~Ss~S~di~il~~~--~~~~~~~Ds~Ra~lPl~~~~~~Dt~piG~alD 343 (388)
T 1xip_A 266 ITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSK--QVIEPSQDSERAVLPISEETDKDTNPIGVAVD 343 (388)
T ss_dssp SCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEECSS--SEEEESSGGGCCBCCBCTTTCCBCCEEEEEEE
T ss_pred CcCCcCCccCCceeeeeehhcccccCCcEEEEeCCCCcceEEeccc--cEEeecCccccceeccCCCCCCCCcceEEEEE
Confidence 111 1 112367777777777766666667777532 2211111 111234455543
Q ss_pred cC--C---------------CEEEEEeCCCcEEEEECCCCc
Q psy10114 779 PD--G---------------EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 779 pD--G---------------~~LaSGS~DGtIrIWdl~s~~ 802 (819)
-. . -.|..-+.||.+..|.+...+
T Consensus 344 ~ss~~~v~~p~~g~e~~~plP~l~~L~~~G~L~~~~~~~~~ 384 (388)
T 1xip_A 344 VVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLFHVA 384 (388)
T ss_dssp CSCCC--------------CCEEEEEETTSEEEEEEEEC--
T ss_pred cccCceecCCCCCcccCCCCCEEEEEcCCceEEEEEEEchh
Confidence 22 1 236677889999999986544
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-09 Score=121.71 Aligned_cols=260 Identities=13% Similarity=0.053 Sum_probs=179.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecCCceEEEEEecC------
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVSVAKQVHKLVGH------ 596 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~tgk~i~tl~gH------ 596 (819)
+.|.+.|..+++........ ..+ .++++|||+.++++. .++.|.++|..+++.+.++.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG--~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGG--FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEEC--SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CeEEEEECCCCEEEEEEECC--CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc
Confidence 68999999999887655443 334 899999999888876 4678999999999998887521
Q ss_pred -CCCeEEEEe--CCceeeeccC--CCeEEEEECCCCCccceEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECCC
Q psy10114 597 -TARVGALAW--NGDMLSSGSR--DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 597 -s~~V~sLaw--ng~~LaSGS~--DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~t 670 (819)
...-..+++ +|++++++.. ++.|.+.|..+.+. +..+..-. . ....|+ .+.+++.+.||++.+.|..+
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv--v~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~ 248 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF--DRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFAD 248 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCT
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE--EEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCC
Confidence 122334566 6778877764 68899999998663 23333211 1 222333 35666777888888888865
Q ss_pred CceeEE----EecCCCCE-EEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE--EEcC-----------CCCeEEEE
Q psy10114 671 MSPLQT----YTEHLAAV-KAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ--CVDT-----------GSQVCNLA 732 (819)
Q Consensus 671 ~~~i~t----~~~h~~~V-tsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~--~l~~-----------~s~V~sLa 732 (819)
++.... +.....++ ..+.+.+++..++++. ..+.+.+.|..++.... .+.. ......++
T Consensus 249 ~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s---~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va 325 (426)
T 3c75_H 249 GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT---YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTA 325 (426)
T ss_dssp TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB---TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEE
T ss_pred CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe---CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeE
Confidence 554432 11111111 2356799998887765 57899999987654221 1110 11122378
Q ss_pred EccCCCEEEEEEec--------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEEEe-CCCcEEEEECCCCc
Q psy10114 733 WSKHSSELVSTHGY--------SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVTGA-GDETLRFWNVFSKV 802 (819)
Q Consensus 733 fSpdg~~LastsGs--------sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaSGS-~DGtIrIWdl~s~~ 802 (819)
++++++.++++... .++.|.++|..+.+.+.++.... ...+++|+|||+ .++++. .++.|.++|+.+.+
T Consensus 326 ~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 326 YHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 99999998886421 13579999999999999886432 478999999999 888887 59999999999988
Q ss_pred eecc
Q psy10114 803 RSQR 806 (819)
Q Consensus 803 ~~~k 806 (819)
....
T Consensus 405 vv~t 408 (426)
T 3c75_H 405 ELRS 408 (426)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7655
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.8e-10 Score=125.94 Aligned_cols=173 Identities=13% Similarity=0.072 Sum_probs=135.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCce----------EEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK----------QVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk----------~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~ 625 (819)
..+..+++++...++++|+.+| +.+|++++.+ .......+.. |..++|+++.|+++ .++.|++||++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence 3689999999999999999986 6669875433 1111223566 99999988899888 88999999998
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
+.. .......|...+.++.+.+.. +++++.||.|.+||+.+++... +...|++++|+|+| ++ .|. .|
T Consensus 115 sl~--~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~-vg~--~d 181 (388)
T 1xip_A 115 ELS--EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LA-VLL--KD 181 (388)
T ss_dssp STT--CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EE-EEE--TT
T ss_pred hhh--ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eE-EEE--cC
Confidence 865 234566777889888887653 9999999999999999877643 45689999999999 33 333 79
Q ss_pred CeEEEEECCCCce--eEEE------c----CCCCeEEEEEccCCCEEEEEE
Q psy10114 706 RCIRFWNTLTGQP--MQCV------D----TGSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 706 gtIrIWDl~tg~~--v~~l------~----~~s~V~sLafSpdg~~Lasts 744 (819)
|++++|+..+++. ..++ . ++..|.++.|.+++.++++-.
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999999888775 5556 2 467799999999999988754
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.9e-09 Score=126.66 Aligned_cols=280 Identities=11% Similarity=0.044 Sum_probs=189.9
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCC---------CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGN---------SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~---------~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
++.++.++.++.|+-+|..+|+..-..+...... ....++. ++..+++++.||.|..+|.++|+.+.++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 5677777778899999999998654333322110 0112333 4678999999999999999999999988
Q ss_pred ecC-C----CCeE-EEEeCCceeeeccC------CCeEEEEECCCCCccceEEEec------------------------
Q psy10114 594 VGH-T----ARVG-ALAWNGDMLSSGSR------DRMILQRDVRTPNSQSERRLVG------------------------ 637 (819)
Q Consensus 594 ~gH-s----~~V~-sLawng~~LaSGS~------DGtI~IWDi~t~~~~~v~~l~g------------------------ 637 (819)
..+ . ..+. +....++.+++++. +|.|..+|.++++.........
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 765 2 1121 22223455555543 7999999999887432222111
Q ss_pred ------ccCCeEEEEECCCCCEEEEEECCC-------------------eEEEEECCCCceeEEEecCC---------CC
Q psy10114 638 ------HRQEVCGLKWSPDNQYLASGGNDN-------------------RLYVWNLHSMSPLQTYTEHL---------AA 683 (819)
Q Consensus 638 ------H~~~VtsLafSpdg~~LaSGS~DG-------------------tI~IWDl~t~~~i~t~~~h~---------~~ 683 (819)
.......+++++++..++.++.++ .|..+|.++++.+..++... ..
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 111123578889889888887664 59999999999988876421 12
Q ss_pred EEEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCC------------Ce---------------------
Q psy10114 684 VKAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS------------QV--------------------- 728 (819)
Q Consensus 684 VtsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s------------~V--------------------- 728 (819)
...+....+|+ .+++.++ .+|.+.++|..+|+.+....... .+
T Consensus 315 p~l~~~~~dG~~~~~l~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAP--KNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp CEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred cEEEecccCCcEeeEEEEEC--CCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 22233334663 3455543 89999999999999887664221 01
Q ss_pred ---EEEEEccCCCEEEEEEec-----------------------------------------CCCeEEEEECCCCcEEEE
Q psy10114 729 ---CNLAWSKHSSELVSTHGY-----------------------------------------SQNQILVWKYPTLTQVAK 764 (819)
Q Consensus 729 ---~sLafSpdg~~LastsGs-----------------------------------------sDg~I~IWDl~s~k~l~s 764 (819)
..++++|++..+++.... ..+.|..||..+++.+.+
T Consensus 393 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 393 HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred cCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 156889998888874321 127899999999999888
Q ss_pred EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 765 l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
... ..++.+..++.+|..++.++.||.+++||..+++...+.
T Consensus 473 ~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 473 VEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 763 344555667778889999999999999999999876543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.4e-09 Score=127.78 Aligned_cols=238 Identities=11% Similarity=0.013 Sum_probs=157.0
Q ss_pred ceEEEEEecC--CeEEEEECC-----CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCce--------
Q psy10114 514 FYLNLVDWSS--QNVLSVGLG-----SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGY-------- 578 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~D-----g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGt-------- 578 (819)
+.+..+.||+ +.++.+..+ ..|++||+.+++.... .. +...+.+++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE--EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC--CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 4677778885 456555432 3599999999987543 11 1122357899999 99998887654
Q ss_pred ------EEEeecCCceE--EEEEe--cCCCCeEEEEe--CCceeeeccCC-----CeEEEEECCCCCccceEEEecccCC
Q psy10114 579 ------VQVWDVSVAKQ--VHKLV--GHTARVGALAW--NGDMLSSGSRD-----RMILQRDVRTPNSQSERRLVGHRQE 641 (819)
Q Consensus 579 ------I~IWDl~tgk~--i~tl~--gHs~~V~sLaw--ng~~LaSGS~D-----GtI~IWDi~t~~~~~v~~l~gH~~~ 641 (819)
|.+|++.++.. ...+. .+...+.++.| +|+.|+..+.+ ..|.+||+.++.......+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 88999877642 22333 33445888888 56677766543 4899999987621113445555555
Q ss_pred eEEEEECCCCCEEEEEECC----CeEEEEECCCC--ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC-
Q psy10114 642 VCGLKWSPDNQYLASGGND----NRLYVWNLHSM--SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL- 714 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~--~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~- 714 (819)
+.... +++|+.|+..+++ +.|.+||+.++ +....+..+...+..++++ +..++++.. .|+..++|...
T Consensus 319 ~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~--~dg~~~l~~~~~ 393 (741)
T 1yr2_A 319 QWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYI--HDAKSQVLAFDL 393 (741)
T ss_dssp CEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEE--ETTEEEEEEEET
T ss_pred eEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEE--ECCEEEEEEEeC
Confidence 55553 4899999888764 45999999875 3333444455566677777 445666654 67776666543
Q ss_pred CCceeEEEcC--CCCeEEEEEccCCCEEEEEE--ecCCCeEEEEECCCCc
Q psy10114 715 TGQPMQCVDT--GSQVCNLAWSKHSSELVSTH--GYSQNQILVWKYPTLT 760 (819)
Q Consensus 715 tg~~v~~l~~--~s~V~sLafSpdg~~Lasts--GssDg~I~IWDl~s~k 760 (819)
+++....+.. ...+..+.++++++.++.+. ....++|..||+.+++
T Consensus 394 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 394 DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4555565643 45688899999998777542 2345789999998776
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.12 E-value=5.9e-08 Score=102.33 Aligned_cols=218 Identities=15% Similarity=0.156 Sum_probs=145.9
Q ss_pred EEEEecC--CeEEEEE-CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 517 NLVDWSS--QNVLSVG-LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 517 ~~ldwS~--~~LLa~g-~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
-...|++ +.++.++ .++.|+.||..+++... ... ...+.+++++++|++++ +. ++.|.+||.++++.....
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~---~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-VTM---DAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-EEC---SSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-EeC---CCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEE
Confidence 3456664 4555554 56899999999887643 222 46799999999999544 44 467999999887654333
Q ss_pred ec----CCCCeEEEEeC--CceeeeccC---------CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE-EE
Q psy10114 594 VG----HTARVGALAWN--GDMLSSGSR---------DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA-SG 657 (819)
Q Consensus 594 ~g----Hs~~V~sLawn--g~~LaSGS~---------DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La-SG 657 (819)
.. ....+.+++++ |+++++... ...-.+|.+..... ......+.....+++|+||++.++ +.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--~~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH--VKKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC--EEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC--EEEEeeccccccceEEcCCCCEEEEec
Confidence 32 12357788884 554443321 12234444443221 222334445678999999998764 45
Q ss_pred ECCCeEEEEEC--CCCce-----eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-CCeE
Q psy10114 658 GNDNRLYVWNL--HSMSP-----LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-SQVC 729 (819)
Q Consensus 658 S~DGtI~IWDl--~t~~~-----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-s~V~ 729 (819)
+.++.|.+||+ .++.. ...+..+.+....++++++|...++.. .++.|..||..+|+.+..+... ..++
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~---~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY---NGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE---TTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc---CCCEEEEEcCCCceEEEEEECCCCCce
Confidence 56789999997 45543 222333446788999999997444433 4688999999999998888765 6799
Q ss_pred EEEEc-cCCCEEEEEEe
Q psy10114 730 NLAWS-KHSSELVSTHG 745 (819)
Q Consensus 730 sLafS-pdg~~LastsG 745 (819)
+++|. |+++.|+++++
T Consensus 245 ~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEESGGGCEEEEEEB
T ss_pred EEEEeCCCCCEEEEEcC
Confidence 99998 89999888654
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.11 E-value=9.7e-09 Score=122.43 Aligned_cols=281 Identities=12% Similarity=0.098 Sum_probs=185.4
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--------CCe-EEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--------NSV-TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--------~~V-tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.++.+++++.++.|+-+|..+|+..-..+..... ..+ ..++. ++..+++++.||.|..+|.++|+.+..
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 3667777888899999999999875433322110 001 11222 356889999999999999999999888
Q ss_pred EecC--CC---CeE-EEEeCCceeeecc------CCCeEEEEECCCCCccceEEEe------------------------
Q psy10114 593 LVGH--TA---RVG-ALAWNGDMLSSGS------RDRMILQRDVRTPNSQSERRLV------------------------ 636 (819)
Q Consensus 593 l~gH--s~---~V~-sLawng~~LaSGS------~DGtI~IWDi~t~~~~~v~~l~------------------------ 636 (819)
.... .. .+. +....++.+++++ .+|.|..+|.++++........
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 7642 11 111 1112234444443 3789999999998743222211
Q ss_pred -----cccCCeEEEEECCCCCEEEEEECCCe-------------------EEEEECCCCceeEEEecC--C-------CC
Q psy10114 637 -----GHRQEVCGLKWSPDNQYLASGGNDNR-------------------LYVWNLHSMSPLQTYTEH--L-------AA 683 (819)
Q Consensus 637 -----gH~~~VtsLafSpdg~~LaSGS~DGt-------------------I~IWDl~t~~~i~t~~~h--~-------~~ 683 (819)
++......++++++++.++.++.++. |..+|.++|+.+..++.. . .+
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 01111125788898899999887764 999999999999888642 1 12
Q ss_pred EEEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCC-----------------------------------
Q psy10114 684 VKAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS----------------------------------- 726 (819)
Q Consensus 684 VtsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s----------------------------------- 726 (819)
........+|+ .+++.+ +.+|.++++|.++|+.+.......
T Consensus 307 ~~l~d~~~~G~~~~~v~~~--~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~ 384 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQA--PKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPA 384 (689)
T ss_dssp EEEEEEEETTEEEEEEEEC--CTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSC
T ss_pred cEEEeeccCCcEEEEEEEE--CCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCC
Confidence 22222222443 244444 389999999999999875432211
Q ss_pred -----CeEEEEEccCCCEEEEEEec-------------------------------------------CCCeEEEEECCC
Q psy10114 727 -----QVCNLAWSKHSSELVSTHGY-------------------------------------------SQNQILVWKYPT 758 (819)
Q Consensus 727 -----~V~sLafSpdg~~LastsGs-------------------------------------------sDg~I~IWDl~s 758 (819)
.-..++++|+...+++.... .+|.|..||..+
T Consensus 385 ~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t 464 (689)
T 1yiq_A 385 FWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK 464 (689)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT
T ss_pred cccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC
Confidence 01236888888888774221 137899999999
Q ss_pred CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 759 LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
++.+.+...+. ++..-.++..|..+++|+.||.++.||..+++...+.
T Consensus 465 G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 465 QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 99998887554 3333466667889999999999999999999876443
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.7e-08 Score=120.27 Aligned_cols=266 Identities=15% Similarity=0.109 Sum_probs=171.7
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC--CCCEEEEEe------cCceEEEeecCCceEEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE--RGNLVAVGT------HHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp--dG~~LAsGs------~DGtI~IWDl~tgk~i~tl 593 (819)
.++.++.++.|+.|+.+|..+|+..-......+......+..+| .+..+++++ .+|.|..+|.++|+.+.++
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 46788888899999999999998764444320111111111111 133455554 3689999999999998887
Q ss_pred ecCC---C----------------------------CeEEEEe--CCceeeeccCCCe-------------------EEE
Q psy10114 594 VGHT---A----------------------------RVGALAW--NGDMLSSGSRDRM-------------------ILQ 621 (819)
Q Consensus 594 ~gHs---~----------------------------~V~sLaw--ng~~LaSGS~DGt-------------------I~I 621 (819)
.... . ....+++ ..+.++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 5210 0 0013455 3567777777763 999
Q ss_pred EECCCCCccceEEEeccc-------CCeEEEEECCCCC---EEEEEECCCeEEEEECCCCceeEEEecCC-CC-------
Q psy10114 622 RDVRTPNSQSERRLVGHR-------QEVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYTEHL-AA------- 683 (819)
Q Consensus 622 WDi~t~~~~~v~~l~gH~-------~~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~~h~-~~------- 683 (819)
+|.++++.........|. ..........+|+ .++.++.+|.++++|.++++.+....... ..
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 999998754333322232 1222222223554 78899999999999999999875433211 00
Q ss_pred -------------------------------EEEEEEcCCCCeEEEEEcc------------------------------
Q psy10114 684 -------------------------------VKAIAWSPHHHGLLASGGG------------------------------ 702 (819)
Q Consensus 684 -------------------------------VtsLafSPdg~~LLaSGgG------------------------------ 702 (819)
-..++++|+...+++....
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 0126788887755553210
Q ss_pred ------------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC
Q psy10114 703 ------------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY 770 (819)
Q Consensus 703 ------------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~ 770 (819)
..++.|+.||+.+|+.+.....+.....-.+...+..+++ |+.|+.++.||.++++.+.+++...+
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~--gt~dg~l~a~D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFE--GSADGRVIAYAADTGEKLWEQPAASG 517 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEE--ECCCCcEEEEECCCCccceeeeCCCC
Confidence 0148899999999999988876665555566677888887 78899999999999999998875432
Q ss_pred C-EEEEEEecCCCE-EEEEeC
Q psy10114 771 R-VLYLAMSPDGEA-IVTGAG 789 (819)
Q Consensus 771 ~-VtsLafSpDG~~-LaSGS~ 789 (819)
. ..-+.|+.||+. +++.+.
T Consensus 518 ~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp CCSCCEEEEETTEEEEEEEEC
T ss_pred cccCceEEEECCEEEEEEEec
Confidence 2 244667788874 444433
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=5.5e-08 Score=115.69 Aligned_cols=275 Identities=9% Similarity=0.079 Sum_probs=185.2
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEecc-CCC--CCeEE-EEEcCCCCEEEEEec------CceEEEeecCCceEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLS-ADG--NSVTS-VAWNERGNLVAVGTH------HGYVQVWDVSVAKQVH 591 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~-~h~--~~Vts-LafSpdG~~LAsGs~------DGtI~IWDl~tgk~i~ 591 (819)
.++.++.++.|+.|+.+|..+|+..-..... ... ..+.+ ... .+..+++++. +|.|..+|.++|+.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 5678888889999999999999876544432 100 11211 111 2445666654 6999999999999998
Q ss_pred EEecCCCC--------------------------------eEEEEe--CCceeeeccCCC-------------------e
Q psy10114 592 KLVGHTAR--------------------------------VGALAW--NGDMLSSGSRDR-------------------M 618 (819)
Q Consensus 592 tl~gHs~~--------------------------------V~sLaw--ng~~LaSGS~DG-------------------t 618 (819)
++...... ...+++ +++.++.++.++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 88643211 013445 456777666554 5
Q ss_pred EEEEECCCCCccceEEEeccc-------CCeEEEEECCCC---CEEEEEECCCeEEEEECCCCceeEEEecCCC------
Q psy10114 619 ILQRDVRTPNSQSERRLVGHR-------QEVCGLKWSPDN---QYLASGGNDNRLYVWNLHSMSPLQTYTEHLA------ 682 (819)
Q Consensus 619 I~IWDi~t~~~~~v~~l~gH~-------~~VtsLafSpdg---~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~------ 682 (819)
|..+|.++++.........|. ....-+....+| +.++.++.+|.++++|.++++.+..+.....
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 999999988754333333231 122233333467 6789999999999999999998877653211
Q ss_pred -----CE------------------------EEEEEcCCCCeEEEEEc--------------c-----------------
Q psy10114 683 -----AV------------------------KAIAWSPHHHGLLASGG--------------G----------------- 702 (819)
Q Consensus 683 -----~V------------------------tsLafSPdg~~LLaSGg--------------G----------------- 702 (819)
.+ ..++++|++..+++... |
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 11 14678888876665431 0
Q ss_pred ---------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC-CCE
Q psy10114 703 ---------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS-YRV 772 (819)
Q Consensus 703 ---------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~-~~V 772 (819)
...+.|..||+.+|+.+.....+..+....+..++..+++ +..|+.+++||..+++.+.++.... ...
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~--g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 522 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ--GTADGRLVAYHAATGEKLWEAPTGTGVVA 522 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEE--ECCCCcEEEEECCCCceeeeeeCCCCccc
Confidence 0127899999999999988877666666667778888887 7789999999999999999987433 223
Q ss_pred EEEEEecCCCEE-EEEeC----------------CCcEEEEECCC
Q psy10114 773 LYLAMSPDGEAI-VTGAG----------------DETLRFWNVFS 800 (819)
Q Consensus 773 tsLafSpDG~~L-aSGS~----------------DGtIrIWdl~s 800 (819)
.-+.+..+|+.. ++.+. .+.+..|.+..
T Consensus 523 ~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 523 APSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp CCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 345667788644 44333 46888888873
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.3e-08 Score=107.92 Aligned_cols=242 Identities=11% Similarity=0.003 Sum_probs=155.1
Q ss_pred CceEEEEeccCCCCCeEEEEEcCCCCEEEEEe--cCceEEEeecCCceEEEEEe-------cCCCCeEEEEeC--Cceee
Q psy10114 543 SQVTRLCDLSADGNSVTSVAWNERGNLVAVGT--HHGYVQVWDVSVAKQVHKLV-------GHTARVGALAWN--GDMLS 611 (819)
Q Consensus 543 g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs--~DGtI~IWDl~tgk~i~tl~-------gHs~~V~sLawn--g~~La 611 (819)
+++..+.++. ..+..++++++|+.+++.. .+|.++||.+.+++. ..+. ++-..+.+++++ +.+++
T Consensus 7 g~~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v 82 (343)
T 2qe8_A 7 DRLEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWM 82 (343)
T ss_dssp -CCEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEE
T ss_pred ceeEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEE
Confidence 3444444443 6789999999999988864 234355665555543 3221 345678999995 33444
Q ss_pred eccC-----CCeEEEEECCCCCccceEEEec------ccCCeEEEEECCCCCEE-EEEE---CCCeEEEEECCCCceeEE
Q psy10114 612 SGSR-----DRMILQRDVRTPNSQSERRLVG------HRQEVCGLKWSPDNQYL-ASGG---NDNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 612 SGS~-----DGtI~IWDi~t~~~~~v~~l~g------H~~~VtsLafSpdg~~L-aSGS---~DGtI~IWDl~t~~~i~t 676 (819)
+-.. ++.|.+||+.+++.. ..+.. +...+.++++++++..+ ++.. .++.|.+||..+++..+.
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~--~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLS--RVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEE--EEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred EcCCCCcCCCCeEEEEECCCCeEE--EEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 3322 578999999876522 22221 22356889999865554 5544 578999999988776555
Q ss_pred EecCC-----------------------------CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC---CCc-------
Q psy10114 677 YTEHL-----------------------------AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL---TGQ------- 717 (819)
Q Consensus 677 ~~~h~-----------------------------~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~---tg~------- 717 (819)
+.+|. ..+..++|+|+++.++++.. ..+.+..++.. .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~--~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM--HSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES--SCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC--CCCeEEEEEHHHhcCCCCChhhhh
Confidence 43321 23688999999988877653 34466666532 111
Q ss_pred -eeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEecCCCEEEEEeCCCcEE
Q psy10114 718 -PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG-HSYRVLYLAMSPDGEAIVTGAGDETLR 794 (819)
Q Consensus 718 -~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g-H~~~VtsLafSpDG~~LaSGS~DGtIr 794 (819)
.+...........++++++|+..++ ...++.|.+||..+++....... +...+.+++|+++|+++++.+..+.+.
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va--~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVG--DLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSA 315 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEE--EGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSG
T ss_pred cceEecccCCCCceEEECCCCCEEEE--ccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccc
Confidence 0122222335678999999987777 66789999999856654333322 245689999999999888877655443
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.9e-08 Score=113.49 Aligned_cols=244 Identities=10% Similarity=0.039 Sum_probs=169.1
Q ss_pred EEecCCeEEEEE----------CCCeEEEEEcCCCceEEEEeccCC-----CCCeEEEEEcCCCCEEEEEec--CceEEE
Q psy10114 519 VDWSSQNVLSVG----------LGSCVYLWSACTSQVTRLCDLSAD-----GNSVTSVAWNERGNLVAVGTH--HGYVQV 581 (819)
Q Consensus 519 ldwS~~~LLa~g----------~Dg~V~LWd~~tg~~~~l~~l~~h-----~~~VtsLafSpdG~~LAsGs~--DGtI~I 581 (819)
++.+++.++.+. .++.|.++|..+.+......+.+. ......++++|||++++++.. ++.|.+
T Consensus 125 ~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsV 204 (426)
T 3c75_H 125 AAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGV 204 (426)
T ss_dssp ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEE
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEE
Confidence 455566655554 467899999999988765555311 133567899999999999874 578999
Q ss_pred eecCCceEEEEEecCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceE--EEecccCC-eEEEEECCCCCEEEEE
Q psy10114 582 WDVSVAKQVHKLVGHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSER--RLVGHRQE-VCGLKWSPDNQYLASG 657 (819)
Q Consensus 582 WDl~tgk~i~tl~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~--~l~gH~~~-VtsLafSpdg~~LaSG 657 (819)
.|+.+++.+.++.-.. ...+..+ ...+++.+.||.+.+.+..+++..... .+...... ...+.++++++.++..
T Consensus 205 ID~~t~kvv~~I~v~g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~ 282 (426)
T 3c75_H 205 VDLEGKTFDRMLDVPD--CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp EETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred EECCCCeEEEEEEcCC--ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE
Confidence 9999999998887422 1222222 356667778888888888443321100 01111111 1235678999988888
Q ss_pred ECCCeEEEEECCCCcee--EEEec----------CCCCEEEEEEcCCCCeEEEEEccC-------CCCeEEEEECCCCce
Q psy10114 658 GNDNRLYVWNLHSMSPL--QTYTE----------HLAAVKAIAWSPHHHGLLASGGGT-------ADRCIRFWNTLTGQP 718 (819)
Q Consensus 658 S~DGtI~IWDl~t~~~i--~t~~~----------h~~~VtsLafSPdg~~LLaSGgGs-------~DgtIrIWDl~tg~~ 718 (819)
+..+.|.+.|....... ..+.. .......++++|+++.++++.... .++.|.++|+.+.+.
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER 362 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE
Confidence 88899999998765421 11110 011122368999999888874210 135899999999999
Q ss_pred eEEEcCCCCeEEEEEccCCC-EEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 719 MQCVDTGSQVCNLAWSKHSS-ELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 719 v~~l~~~s~V~sLafSpdg~-~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
+..+..+.....++|+|||+ .++++ ...++.|.++|..+++.+.++
T Consensus 363 v~~I~vg~~P~gia~spDg~~~lyv~-n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 363 INKIELGHEIDSINVSQDAEPLLYAL-SAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEEEEECEEEECCSSSCEEEEE-ETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcCeEEEccCCCEEEEEE-cCCCCeEEEEECCCCCEEEEe
Confidence 99998877899999999999 77774 446899999999999999887
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.99 E-value=8.2e-08 Score=107.11 Aligned_cols=230 Identities=13% Similarity=0.067 Sum_probs=153.1
Q ss_pred EEEEEecC-CeEEEEE-CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc--eEEEeecCCceEEE
Q psy10114 516 LNLVDWSS-QNVLSVG-LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG--YVQVWDVSVAKQVH 591 (819)
Q Consensus 516 v~~ldwS~-~~LLa~g-~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG--tI~IWDl~tgk~i~ 591 (819)
...+.|++ +.++.+. .++.|+.||..+++...+... ..... ++|+++|+.|+++..++ .|.++|...+....
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG---FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET---CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc---CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 34556654 3455554 458899999998877655432 22334 99999999999988866 79999987665444
Q ss_pred EE----ecCCCCeEEEEeCC--ceeeeccCCCeEEEEECCCCCccceEE--EecccCCe--EEEEECCC-CCEEEEEECC
Q psy10114 592 KL----VGHTARVGALAWNG--DMLSSGSRDRMILQRDVRTPNSQSERR--LVGHRQEV--CGLKWSPD-NQYLASGGND 660 (819)
Q Consensus 592 tl----~gHs~~V~sLawng--~~LaSGS~DGtI~IWDi~t~~~~~v~~--l~gH~~~V--tsLafSpd-g~~LaSGS~D 660 (819)
.+ ......+.+++++. ..|+.+..++.|..||..+........ ..++...- .+++|+|+ +..+++...+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 44 22445677888853 455557778999999998765221110 11222222 29999995 5566666678
Q ss_pred CeEEEEECCCCceeEEEecCC---------------CCEEEEEEcCCCCeEEEEEccC-CCCeEEEEECCCCceeEEEcC
Q psy10114 661 NRLYVWNLHSMSPLQTYTEHL---------------AAVKAIAWSPHHHGLLASGGGT-ADRCIRFWNTLTGQPMQCVDT 724 (819)
Q Consensus 661 GtI~IWDl~t~~~i~t~~~h~---------------~~VtsLafSPdg~~LLaSGgGs-~DgtIrIWDl~tg~~v~~l~~ 724 (819)
+.|+.||.... +..+.++. .....++++++|. ++++. + .++.|+.||..+++.......
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad--~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD--GFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE--TTTTCEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe--CCCCCEEEEEECCCCEEEEEeCC
Confidence 89999997643 33333322 3478999999998 55543 3 478999999888875444433
Q ss_pred ---------------CCCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 725 ---------------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 725 ---------------~s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
-.....++++++|..+++ ...++.|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa--d~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIA--EAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE--ESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEE--ECCCCeEEEEEe
Confidence 135889999999766665 566778887764
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=6.7e-07 Score=95.85 Aligned_cols=212 Identities=13% Similarity=0.031 Sum_probs=140.1
Q ss_pred EEEecC--CeEEEEE-CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 518 LVDWSS--QNVLSVG-LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 518 ~ldwS~--~~LLa~g-~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
...|++ +.++.++ .++.|..||..+++.... .. ...+.+++|+++|+++++ +.+| |.+||.++++......
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~---~~~v~~i~~~~dg~l~v~-~~~g-l~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLASGRKTVH-AL---PFMGSALAKISDSKQLIA-SDDG-LFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-EC---SSCEEEEEEEETTEEEEE-ETTE-EEEEETTTCCEEEEEC
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-EC---CCcceEEEEeCCCeEEEE-ECCC-EEEEECCCCcEEEEee
Confidence 345664 4554444 578999999988765432 22 357999999999987665 4444 9999998877543322
Q ss_pred c----CCCCeEEEEeC--CceeeeccC------CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE-ECCC
Q psy10114 595 G----HTARVGALAWN--GDMLSSGSR------DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG-GNDN 661 (819)
Q Consensus 595 g----Hs~~V~sLawn--g~~LaSGS~------DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DG 661 (819)
. ....+.+++++ |+++++... .+.|..+| +++ ...+..+.....+++|++|++.++.+ +.++
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~---~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK---VTKLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE---EEEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc---EEEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 1 12357888884 555444322 24566666 322 22233344567899999999877555 4578
Q ss_pred eEEEEECC--CC-ce-----eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-CCeEEEE
Q psy10114 662 RLYVWNLH--SM-SP-----LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-SQVCNLA 732 (819)
Q Consensus 662 tI~IWDl~--t~-~~-----i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-s~V~sLa 732 (819)
.|.+||.. ++ +. ...+.........++++++|...+++. .++.|..||. +++.+..+... ..+.+++
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~---~~~~v~~~d~-~g~~~~~i~~~~~~~~~~a 277 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW---GEGAVDRYDT-DGNHIARYEVPGKQTTCPA 277 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE---TTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe---CCCEEEEECC-CCCEEEEEECCCCCcEEEE
Confidence 99999986 55 32 222333445678899999997555443 3678999998 57776666544 4699999
Q ss_pred Ec-cCCCEEEEEE
Q psy10114 733 WS-KHSSELVSTH 744 (819)
Q Consensus 733 fS-pdg~~Lasts 744 (819)
|+ ++++.+++++
T Consensus 278 f~g~d~~~L~vt~ 290 (326)
T 2ghs_A 278 FIGPDASRLLVTS 290 (326)
T ss_dssp EESTTSCEEEEEE
T ss_pred EecCCCCEEEEEe
Confidence 98 8988887754
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.8e-08 Score=103.27 Aligned_cols=255 Identities=11% Similarity=0.086 Sum_probs=166.9
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGAL 603 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sL 603 (819)
+.+..++. + |+.+|. +++... .+............. +..+.+|+.+|.+..+|.+ ++.......+...+.++
T Consensus 71 g~l~v~t~-~-l~~~d~-~g~~~~--~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 142 (330)
T 3hxj_A 71 GTIYFGSD-K-VYAINP-DGTEKW--RFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATP 142 (330)
T ss_dssp TEECCSSC-E-EEEECC-CGGGGG--GSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCC
T ss_pred CcEEEecC-c-EEEECC-CCcEEE--EEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeee
Confidence 44444443 3 888886 443311 121112222223333 5578888889999999988 87777776666666666
Q ss_pred EeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCC
Q psy10114 604 AWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLA 682 (819)
Q Consensus 604 awn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~ 682 (819)
..+ ++.+..|+.++.+..+|.. ++. ..........+.++...+++...+ ++ +.|..+| .+++....+.....
T Consensus 143 ~~~~~g~l~vgt~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~ 215 (330)
T 3hxj_A 143 IVSEDGTIYVGSNDNYLYAINPD-GTE--KWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW 215 (330)
T ss_dssp EECTTSCEEEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC
T ss_pred EEcCCCEEEEEcCCCEEEEECCC-CCE--eEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc
Confidence 665 5678888888999999988 442 233334445567777777777554 44 7899999 77777777776667
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCC-eEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ-VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~-V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
.+.++...++|...+.+ .++.+..+|. +++.+..+..... +.++...+++. +.+ +..++.+..+|. +++.
T Consensus 216 ~~~~~~~~~~g~l~v~t----~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v--~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTS----LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYF--GSYDGHLYAINP-DGTE 286 (330)
T ss_dssp CCSCCEECTTSCEEEEE----TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEE--ECTTCEEEEECT-TSCE
T ss_pred ceeceEECCCCeEEEEc----CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEE--ecCCCCEEEECC-CCcE
Confidence 78888888887643332 5788888874 5666665544332 44556655665 444 567789999995 7887
Q ss_pred EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+..+......+.++..+++|+ |..|+.+|.+++......+.
T Consensus 287 ~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 287 KWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp EEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-----
T ss_pred EEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccccc
Confidence 777766566677788878886 55589999999988765543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-06 Score=90.09 Aligned_cols=241 Identities=7% Similarity=0.037 Sum_probs=158.2
Q ss_pred CCeEEEEEcCCCceE-----EEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecCCCCeEEEEe
Q psy10114 532 GSCVYLWSACTSQVT-----RLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGHTARVGALAW 605 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~-----~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw 605 (819)
.+.|+.++..+.... .+... ....+.+++|++++..|+.+. .++.|..+|.+.+...............+++
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~--~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~ 86 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHI--PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIAL 86 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEE--EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEE
T ss_pred CCeEEEEEecCcccccccceeeecC--CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEE
Confidence 357888887665421 11111 124578999999766666554 5689999998766543333333356778888
Q ss_pred C--Cc-eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC---CCeEEEEECCCCceeEEE-e
Q psy10114 606 N--GD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN---DNRLYVWNLHSMSPLQTY-T 678 (819)
Q Consensus 606 n--g~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~---DGtI~IWDl~t~~~i~t~-~ 678 (819)
+ ++ ..++-..++.|.+++.+..... ...........+++++|++..+..+.. .+.|..++..... ...+ .
T Consensus 87 d~~~~~lyv~d~~~~~I~~~~~~g~~~~--~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~ 163 (267)
T 1npe_A 87 DHLGRTIFWTDSQLDRIEVAKMDGTQRR--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQ 163 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEEC
T ss_pred EecCCeEEEEECCCCEEEEEEcCCCCEE--EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEE
Confidence 4 34 4555566789999998754321 112222256789999997666655543 3688888875433 3333 2
Q ss_pred cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 679 ~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
........+++++++..++++.. ..+.|..+|..++..............++. ++..++.+ ....+.|..+|..+
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~--d~~~lyva-~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQYPFAVTS--YGKNLYYT-DWKTNSVIAMDLAI 238 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCCSEEEEEE--ETTEEEEE-ETTTTEEEEEETTT
T ss_pred CCCCCCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCCCceEEEE--eCCEEEEE-ECCCCeEEEEeCCC
Confidence 33456789999999888888765 678999999986554444444445667765 45666664 45678999999999
Q ss_pred CcEEEEEecCC-CCEEEEEEecCCC
Q psy10114 759 LTQVAKLTGHS-YRVLYLAMSPDGE 782 (819)
Q Consensus 759 ~k~l~sl~gH~-~~VtsLafSpDG~ 782 (819)
++.+.++.... ....++++.|++.
T Consensus 239 g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 239 SKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCceEEEccccccccceeeecCccC
Confidence 99988886443 2467888888764
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=5.3e-10 Score=122.89 Aligned_cols=201 Identities=13% Similarity=0.033 Sum_probs=113.7
Q ss_pred CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccC-Ce
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ-EV 642 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~-~V 642 (819)
++..+++|+.||.|..||.++|+.+.++.. +.+.+..+ ++..+++++.||.|+.||..+++... ....+.. .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w--~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT--KLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--ECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--eeeccCcccc
Confidence 578999999999999999999999988876 33333322 45577888999999999998776432 2221111 11
Q ss_pred E-EEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEE
Q psy10114 643 C-GLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQC 721 (819)
Q Consensus 643 t-sLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~ 721 (819)
. +.... ++..+++|+.|+.|+.||.++|+.+.++..+. ...++|++..+++.+ .|+.|+.||.++|+.+..
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~---~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGR---TEYTITMYDTKTRELRWN 155 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEE---EEEEEECCCSSSSSCCCE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEe---cCCEEEEEECCCCCEEEe
Confidence 0 00111 35578888899999999999999888776543 234566666555543 689999999999987655
Q ss_pred EcCCCCeEEEEEccCC---CEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEecCCC
Q psy10114 722 VDTGSQVCNLAWSKHS---SELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL-YLAMSPDGE 782 (819)
Q Consensus 722 l~~~s~V~sLafSpdg---~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vt-sLafSpDG~ 782 (819)
+.... ....+++.+. ..+++ +..+|.+..||..+++.+.+.... .++. ..+++++|.
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~v~~--~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 156 ATYFD-YAASLPEDDVDYKMSHFV--SNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGL 216 (369)
T ss_dssp EEEEE-ECCBCCCCCTTCCCCEEE--EETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSC
T ss_pred Eeccc-ccCccccCCccccceEEE--ECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCce
Confidence 53211 1222333332 45555 567899999999999998887643 4443 345556664
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=3.2e-08 Score=109.57 Aligned_cols=252 Identities=11% Similarity=-0.029 Sum_probs=166.4
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecCCceEEEEEecC-C-----
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVSVAKQVHKLVGH-T----- 597 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~tgk~i~tl~gH-s----- 597 (819)
.|.+.|..+++........ ..+ .++++|||+.++++. .++.|.+||..+++.+.++... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG--~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA--FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC--TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCC--CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccccc
Confidence 8889999999887654443 344 799999999999886 3689999999999999998643 1
Q ss_pred -CCeEEEEe--CCceeeeccC--CCeEEE--EECCCCCccceEEEecccCCeEEEEECCCC-CEEEEEECCCeEEEEECC
Q psy10114 598 -ARVGALAW--NGDMLSSGSR--DRMILQ--RDVRTPNSQSERRLVGHRQEVCGLKWSPDN-QYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 598 -~~V~sLaw--ng~~LaSGS~--DGtI~I--WDi~t~~~~~v~~l~gH~~~VtsLafSpdg-~~LaSGS~DGtI~IWDl~ 669 (819)
.....+++ +|++++++.. +..+.+ +|..+ ...+.. .+. ....|++ +.+++.+.||++.+.|..
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECC
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECc
Confidence 12335566 6778887764 467888 88766 122221 111 1123433 345566678888888887
Q ss_pred C-----CceeE----EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--eeEEEcCC-----------CC
Q psy10114 670 S-----MSPLQ----TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--PMQCVDTG-----------SQ 727 (819)
Q Consensus 670 t-----~~~i~----t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l~~~-----------s~ 727 (819)
+ ++... .+.....+. + ++++..++.+. . +.+.+.|..++. .+..+... ..
T Consensus 194 ~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs---~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 194 AAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAV---A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECB---S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred cccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEc---C-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 6 33221 111122333 3 56666655543 5 899999987543 22222111 11
Q ss_pred eEEEEEccCCCEEEEEEe-c-C-----CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC-EEEEEe-CCCcEEEEEC
Q psy10114 728 VCNLAWSKHSSELVSTHG-Y-S-----QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE-AIVTGA-GDETLRFWNV 798 (819)
Q Consensus 728 V~sLafSpdg~~LastsG-s-s-----Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~-~LaSGS-~DGtIrIWdl 798 (819)
...++++++++.++++.. . . ++.+.++|..+++.+..+.... ...+++|++||+ .+++.. .+++|.++|+
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 122689999999987533 2 1 2356699999999988876443 588999999998 556666 5999999999
Q ss_pred CCCceeccc
Q psy10114 799 FSKVRSQRE 807 (819)
Q Consensus 799 ~s~~~~~k~ 807 (819)
.+.+.....
T Consensus 345 ~t~kvv~~I 353 (368)
T 1mda_H 345 ASDQDQSSV 353 (368)
T ss_dssp SSCEEEEEC
T ss_pred CCCcEEEEE
Confidence 998876544
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.2e-07 Score=95.98 Aligned_cols=220 Identities=15% Similarity=0.135 Sum_probs=143.2
Q ss_pred EEEec--CCe-EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 518 LVDWS--SQN-VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 518 ~ldwS--~~~-LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
...|+ ++. +++...++.|..|+. +++.... ......+.+++++++|+++++...++.|.+||.+ ++......
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~---~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~ 123 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVL---LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVG 123 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEE---EESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEE---eCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEe
Confidence 44555 454 444456789999998 5554332 2345678999999999977666666889999986 54322221
Q ss_pred cC----CCCeEEEEe--CCceeee----ccC-------------CCeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 595 GH----TARVGALAW--NGDMLSS----GSR-------------DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 595 gH----s~~V~sLaw--ng~~LaS----GS~-------------DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
.. ...+.++++ +|++.++ |.. .+.|..+|..+++... +. ......+++|+||+
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~---~~-~~~~p~gl~~spdg 199 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR---MA-DLDHPNGLAFSPDE 199 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE---EE-EESSEEEEEECTTS
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE---Ee-cCCCCcceEEcCCC
Confidence 11 134567888 4666664 432 3567778776655322 22 44567899999999
Q ss_pred CEEEEEECC------CeEEEEECCCCcee--EEE-ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 652 QYLASGGND------NRLYVWNLHSMSPL--QTY-TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 652 ~~LaSGS~D------GtI~IWDl~t~~~i--~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
+.|+.+..+ +.|.+||+..+... ..+ ....+....++++++|. +.++. .+.|.+||. +++.+..+
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~----~~gv~~~~~-~g~~~~~~ 273 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS----GTGVCVFDS-DGQLLGHI 273 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC----SSEEEEECT-TSCEEEEE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec----CCcEEEECC-CCCEEEEE
Confidence 988777665 78999998765411 111 11234456789999998 44432 235999998 57777777
Q ss_pred cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEE
Q psy10114 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~LastsGssDg~I~IWD 755 (819)
.....+.+++|+++++.|++++ . +.+..++
T Consensus 274 ~~~~~~~~~~f~~d~~~L~it~--~-~~l~~~~ 303 (305)
T 3dr2_A 274 PTPGTASNCTFDQAQQRLFITG--G-PCLWMLP 303 (305)
T ss_dssp ECSSCCCEEEECTTSCEEEEEE--T-TEEEEEE
T ss_pred ECCCceeEEEEeCCCCEEEEEc--C-CeEEEEE
Confidence 6666789999999999888843 3 3444444
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.5e-09 Score=119.35 Aligned_cols=258 Identities=12% Similarity=0.044 Sum_probs=142.9
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCC-e
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR-V 600 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~-V 600 (819)
+++.+++++.|+.|+.||..+|+..-.... +.+.+..+..+|..+++++.||.|..||.++|+.+.....+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 467899999999999999999987644333 34555556667878888889999999999999877666543211 1
Q ss_pred -EEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe
Q psy10114 601 -GALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 601 -~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~ 678 (819)
.+... .++.+++|+.|+.+..||.++++.. ..+..+. ...++|++..+++++.|+.|+.||.++++.+..+.
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~--w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQ--QTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEE--EEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 01122 4567889999999999999987743 2222222 23456788899999999999999999999877665
Q ss_pred cCCCCEEEEEEcCCC---CeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEE-EEEccCCCEEEEEEecCCCeEEEE
Q psy10114 679 EHLAAVKAIAWSPHH---HGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN-LAWSKHSSELVSTHGYSQNQILVW 754 (819)
Q Consensus 679 ~h~~~VtsLafSPdg---~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~s-LafSpdg~~LastsGssDg~I~IW 754 (819)
.+. ....++.++. ..+++.+ .|+.+..||.++|+.+......+++.. .+++++|...+......++.+..+
T Consensus 158 ~~~--~~~~~~~~~~~~~~~v~~~~---~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~~~~l~~l 232 (369)
T 2hz6_A 158 YFD--YAASLPEDDVDYKMSHFVSN---GDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVAVETLRYL 232 (369)
T ss_dssp EEE--ECCBCCCCCTTCCCCEEEEE---TSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEEHHHHHHH
T ss_pred ccc--ccCccccCCccccceEEEEC---CCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeecccceeee
Confidence 321 1223333332 3344433 699999999999999888877777654 344455543211000012334445
Q ss_pred ECCCCc----EEEEEecCCCCEEEEEEec--CCCEEEEEeCCCcEEEEECC
Q psy10114 755 KYPTLT----QVAKLTGHSYRVLYLAMSP--DGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 755 Dl~s~k----~l~sl~gH~~~VtsLafSp--DG~~LaSGS~DGtIrIWdl~ 799 (819)
|..+++ .+.+.... +.+. +| .+..|+.++.||.++..+..
T Consensus 233 d~~tG~~~~~~~W~~~~~-~~~~----sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 233 TFMSGEVGRITKWKYPFP-KETE----AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHTSCCCCC-CHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred ehhcCCcccceeeeeccC-cccc----ccccccceEEEecccCCEEecCcc
Confidence 544444 22222110 1110 11 23467777888888877765
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.86 E-value=8.8e-07 Score=100.24 Aligned_cols=242 Identities=13% Similarity=0.130 Sum_probs=154.6
Q ss_pred CceEEEEeccCCCCCeEEEEE-----------c--CCCCEEEEE-ecCceEEEeecCCc----eEEEEEec-------CC
Q psy10114 543 SQVTRLCDLSADGNSVTSVAW-----------N--ERGNLVAVG-THHGYVQVWDVSVA----KQVHKLVG-------HT 597 (819)
Q Consensus 543 g~~~~l~~l~~h~~~VtsLaf-----------S--pdG~~LAsG-s~DGtI~IWDl~tg----k~i~tl~g-------Hs 597 (819)
+++.....+....+......| + .++++|++. ..++.|.|+|+.+. +..++++. ..
T Consensus 58 ~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~ 137 (462)
T 2ece_A 58 SKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY 137 (462)
T ss_dssp TSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE
T ss_pred ceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC
Confidence 444444444443344444455 6 778777665 45788999999765 66666630 11
Q ss_pred CCeEEEEe--CCceeeeccCC------CeEEEEECCCCCccceEEEec--cc-CCeEEEEECCCCCEEEEEE--------
Q psy10114 598 ARVGALAW--NGDMLSSGSRD------RMILQRDVRTPNSQSERRLVG--HR-QEVCGLKWSPDNQYLASGG-------- 658 (819)
Q Consensus 598 ~~V~sLaw--ng~~LaSGS~D------GtI~IWDi~t~~~~~v~~l~g--H~-~~VtsLafSpdg~~LaSGS-------- 658 (819)
..-..+.. +| .++++..+ |.|.+.|..+.+. +.+... .. .--..+.|+|+++.+++..
T Consensus 138 s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v--~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 138 SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP--LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE--EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE--EEEEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence 12222333 44 55554444 7899999988663 234432 22 1133578899999888874
Q ss_pred -----------CCCeEEEEECCCCceeEEEecCC--CCEEEEEE--cCCCCeEEEEEc---cCCCCeEEEEECCCCce--
Q psy10114 659 -----------NDNRLYVWNLHSMSPLQTYTEHL--AAVKAIAW--SPHHHGLLASGG---GTADRCIRFWNTLTGQP-- 718 (819)
Q Consensus 659 -----------~DGtI~IWDl~t~~~i~t~~~h~--~~VtsLaf--SPdg~~LLaSGg---Gs~DgtIrIWDl~tg~~-- 718 (819)
.+++|.+||+.+++.++++.... .....+.| +|+++..++++. ...+++|.+|....|+.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 36899999999988888876531 23455656 999998877652 00356777766544431
Q ss_pred eEEE--cC-----------------CCCeEEEEEccCCCEEEEEEecCCCeEEEEECC---CCcEEEEEecCC-------
Q psy10114 719 MQCV--DT-----------------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP---TLTQVAKLTGHS------- 769 (819)
Q Consensus 719 v~~l--~~-----------------~s~V~sLafSpdg~~LastsGssDg~I~IWDl~---s~k~l~sl~gH~------- 769 (819)
.+.+ .. +.....+.+|+||++|+++ ....+.|.+||+. +.+.+..+....
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVS-nrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~ 373 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLS-LWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADH 373 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEE-ETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCC
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEE-eCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccc
Confidence 1111 11 2457889999999999986 4456899999985 335555554320
Q ss_pred -------CCEEEEEEecCCCEEEEEe
Q psy10114 770 -------YRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 770 -------~~VtsLafSpDG~~LaSGS 788 (819)
+....++++|||++|+++.
T Consensus 374 ~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 374 PAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1358899999999999888
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-07 Score=112.14 Aligned_cols=200 Identities=15% Similarity=0.166 Sum_probs=134.8
Q ss_pred CCCCeEEEEe--CCceee-----eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC-------
Q psy10114 596 HTARVGALAW--NGDMLS-----SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN------- 661 (819)
Q Consensus 596 Hs~~V~sLaw--ng~~La-----SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG------- 661 (819)
|...+..++| +|+.|+ .|+.+..|+++|+.+++... ..+.. ....+++|+ ||+.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLE-TPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEE-EEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCc-cccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 3445667777 566666 45555789999999977322 12221 113567899 999999998874
Q ss_pred ------eEEEEECCCCce--eEEEe--c-CCCCEEEEEEcCCCCeEEEEEc-cCCCCeEEEEECCCCc-eeEEE-cCCCC
Q psy10114 662 ------RLYVWNLHSMSP--LQTYT--E-HLAAVKAIAWSPHHHGLLASGG-GTADRCIRFWNTLTGQ-PMQCV-DTGSQ 727 (819)
Q Consensus 662 ------tI~IWDl~t~~~--i~t~~--~-h~~~VtsLafSPdg~~LLaSGg-Gs~DgtIrIWDl~tg~-~v~~l-~~~s~ 727 (819)
.|++|++.++.. ...+. . +...+.++.|+|+|+.++++.+ +..++.|.++|+.++. ....+ .....
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 399999987653 23333 3 4455788999999999877654 2344699999998763 33333 33333
Q ss_pred eEEEEEccCCCEEEEEEecC--CCeEEEEECCCCcE--EEEEecCCCCEEEEEEecCCCEEEEEeCCC---cEEEEECCC
Q psy10114 728 VCNLAWSKHSSELVSTHGYS--QNQILVWKYPTLTQ--VAKLTGHSYRVLYLAMSPDGEAIVTGAGDE---TLRFWNVFS 800 (819)
Q Consensus 728 V~sLafSpdg~~LastsGss--Dg~I~IWDl~s~k~--l~sl~gH~~~VtsLafSpDG~~LaSGS~DG---tIrIWdl~s 800 (819)
.... ++++|+.++..+... .+.|..+|+.++.. ...+..|...+. .|+++++.|+....++ .|++|++.+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 4443 778888877764322 46899999987654 345667776665 8999999887766544 689999876
Q ss_pred Cc
Q psy10114 801 KV 802 (819)
Q Consensus 801 ~~ 802 (819)
+.
T Consensus 360 ~~ 361 (693)
T 3iuj_A 360 KR 361 (693)
T ss_dssp CE
T ss_pred Ce
Confidence 54
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-08 Score=105.76 Aligned_cols=255 Identities=15% Similarity=0.072 Sum_probs=168.4
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
++.+..++.++.|..+| .+++... ........+.++...++|. +.+|+.+ +..+|. +++.+..+.........
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~--~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~ 102 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKW--FFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSD 102 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEE--SSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CC
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEE--EEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccC
Confidence 45667777788899999 7877643 3333334567777777775 5555554 888886 55543333222222222
Q ss_pred EEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCC
Q psy10114 603 LAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLA 682 (819)
Q Consensus 603 Lawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~ 682 (819)
....++.+..++.++.+..+|.. ++. ..........+.++...+++. +..++.++.|..+|.. ++....+.....
T Consensus 103 ~~~~~~~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~ 177 (330)
T 3hxj_A 103 FTIFEDILYVTSMDGHLYAINTD-GTE--KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA 177 (330)
T ss_dssp EEEETTEEEEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred ceEECCEEEEEecCCEEEEEcCC-CCE--EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC
Confidence 33346778888889999999987 442 233334444556667776776 6667888999999998 887777776666
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
.+.++...+++. +.+ + . +.+..+| .+++....... ...+.++...++|...+ +..++.+..+| .+++.
T Consensus 178 ~~~~~~~d~~g~-l~v-~---t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v---~t~~~gl~~~~-~~g~~ 246 (330)
T 3hxj_A 178 ITSAASIGKDGT-IYF-G---S-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV---TSLDGHLYAIN-PDGTE 246 (330)
T ss_dssp CCSCCEECTTCC-EEE-E---S-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE---EETTTEEEEEC-TTSCE
T ss_pred ceeeeEEcCCCE-EEE-E---e-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE---EcCCCeEEEEC-CCCCE
Confidence 677788877776 333 2 2 7899999 77777666654 35577888888876555 44578888887 56777
Q ss_pred EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+..+......+.++.+.++| .|..++.+|.|..+|. +++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 247 KWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp EEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC
T ss_pred eEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCc
Confidence 77766555445556666566 4666888889999986 444
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=5.1e-07 Score=105.32 Aligned_cols=279 Identities=11% Similarity=0.026 Sum_probs=177.4
Q ss_pred CCeEEEEEC-CCeEEEEEc-CCCceEEEEeccCCCC--------C-eEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 523 SQNVLSVGL-GSCVYLWSA-CTSQVTRLCDLSADGN--------S-VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 523 ~~~LLa~g~-Dg~V~LWd~-~tg~~~~l~~l~~h~~--------~-VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
++.+..++. ++.|+-.|. .+|+..-......... . -..++. ++..+++++.||.+..+|.++|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 566666676 788999999 8888654333322110 0 011222 36688899999999999999999988
Q ss_pred EEecCC----CCeE-EEEeCCceeeeccC------CCeEEEEECCCCCccceEEEeccc---------------------
Q psy10114 592 KLVGHT----ARVG-ALAWNGDMLSSGSR------DRMILQRDVRTPNSQSERRLVGHR--------------------- 639 (819)
Q Consensus 592 tl~gHs----~~V~-sLawng~~LaSGS~------DGtI~IWDi~t~~~~~v~~l~gH~--------------------- 639 (819)
+..... ..+. +....++.+++++. ++.|..+|.++++...........
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~ 219 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGL 219 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSH
T ss_pred EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccccc
Confidence 775322 0121 11123445555544 799999999988743222211110
Q ss_pred --------------C-CeEEEEECCCCCEEEEEECC----------------CeEEEEECCCCceeEEEecCC-------
Q psy10114 640 --------------Q-EVCGLKWSPDNQYLASGGND----------------NRLYVWNLHSMSPLQTYTEHL------- 681 (819)
Q Consensus 640 --------------~-~VtsLafSpdg~~LaSGS~D----------------GtI~IWDl~t~~~i~t~~~h~------- 681 (819)
. ....+++.++...+..++.+ +.|..+|.++++.+..++...
T Consensus 220 g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~ 299 (571)
T 2ad6_A 220 GTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFA 299 (571)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCC
T ss_pred ccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccc
Confidence 0 00235566766677666532 369999999999988876321
Q ss_pred ---CCEEEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCC--------------Ce--------------
Q psy10114 682 ---AAVKAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS--------------QV-------------- 728 (819)
Q Consensus 682 ---~~VtsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s--------------~V-------------- 728 (819)
.++. +....+|+ .+++.++ .+|.+.++|..+|+.+....... ++
T Consensus 300 ~~~~p~l-~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 300 GVNQMVL-TDQPVNGKMTPLLSHID--RNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCEE-EEEEETTEEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cCCCCEE-EecccCCcEEEEEEEeC--CCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 2221 22224564 3455544 78999999999999887664322 11
Q ss_pred ------------EEEEEccCCCEEEEEEe-----------------------------------cCCCeEEEEECCCCcE
Q psy10114 729 ------------CNLAWSKHSSELVSTHG-----------------------------------YSQNQILVWKYPTLTQ 761 (819)
Q Consensus 729 ------------~sLafSpdg~~LastsG-----------------------------------ssDg~I~IWDl~s~k~ 761 (819)
..++++|+...+++.+. ..++.|..+|..+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 23578888877776431 1357899999999999
Q ss_pred EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
+.+.... ..+.+..+...+..++.++.||.|+.+|..+++...+.
T Consensus 457 ~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 457 KWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp EEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 8887633 22333333445667888999999999999998876543
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.9e-07 Score=107.25 Aligned_cols=281 Identities=11% Similarity=0.054 Sum_probs=190.4
Q ss_pred ecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEe-cc------------------C------------
Q psy10114 505 LDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCD-LS------------------A------------ 553 (819)
Q Consensus 505 Ldap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~-l~------------------~------------ 553 (819)
.-+|.-.|.||. +.++|..|.|+++-+.+++..+..- |. .
T Consensus 6 ~~~~g~~d~~~~---------f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~ 76 (595)
T 1fwx_A 6 SVAPGQLDDYYG---------FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAA 76 (595)
T ss_dssp CCCTTCCCSEEE---------EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHH
T ss_pred cCCCCCcccEEE---------EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhc
Confidence 345666666664 4566778888888877765443211 10 0
Q ss_pred C------CCCeEEEEEcC-----CCCEEEEEec-CceEEEeecCCceEEEEEecC-CCCeEEEEe----CCceeeecc--
Q psy10114 554 D------GNSVTSVAWNE-----RGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGH-TARVGALAW----NGDMLSSGS-- 614 (819)
Q Consensus 554 h------~~~VtsLafSp-----dG~~LAsGs~-DGtI~IWDl~tgk~i~tl~gH-s~~V~sLaw----ng~~LaSGS-- 614 (819)
+ .+.....+.|. ||+++++... ++.|.+.|+++.++.+.+.-. ......+++ +++++++++
T Consensus 77 ~g~~~~~~gd~hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~ 156 (595)
T 1fwx_A 77 NGKRIHDNGDLHHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGED 156 (595)
T ss_dssp TTCSSCCCCCBCCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECS
T ss_pred cCceecccCCCCccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEeccc
Confidence 0 12223355555 7888888765 467999999999988866522 345667775 466666663
Q ss_pred ----------------CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC-----------------
Q psy10114 615 ----------------RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN----------------- 661 (819)
Q Consensus 615 ----------------~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG----------------- 661 (819)
.++.+.+.|..+.+.. .++.-. +....++.+|||+++++.+.+.
T Consensus 157 ~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~--~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v 233 (595)
T 1fwx_A 157 ETPLVNDGTNMEDVANYVNVFTAVDADKWEVA--WQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHI 233 (595)
T ss_dssp CEESSCSSSSTTCGGGEEEEEEEEETTTTEEE--EEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEE
T ss_pred ccccCCCCcccccccccCceEEEEECCCCeEE--EEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceE
Confidence 3468899999875532 222211 1456778999999998888543
Q ss_pred ---------------------eEEEEECCC--Cce-eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc
Q psy10114 662 ---------------------RLYVWNLHS--MSP-LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717 (819)
Q Consensus 662 ---------------------tI~IWDl~t--~~~-i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~ 717 (819)
.|.|.|.++ ++. +..+... ....++.++|||+++++++. .+.+|.++|+.+.+
T Consensus 234 ~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~--~s~~VsVid~~~~~ 310 (595)
T 1fwx_A 234 VVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFD 310 (595)
T ss_dssp EEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECT--TSSBEEEEEGGGHH
T ss_pred EEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCC--CCCeEEEEECcccc
Confidence 366777776 444 4444322 23467899999999999876 78999999999653
Q ss_pred ------------eeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC----------CcEEEEEecCCCCE-E-
Q psy10114 718 ------------PMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT----------LTQVAKLTGHSYRV-L- 773 (819)
Q Consensus 718 ------------~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s----------~k~l~sl~gH~~~V-t- 773 (819)
.+..+..+.....++|+++| .++++ ..-|++|.+||+.+ .+.+.++..|..+- .
T Consensus 311 ~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t-~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 311 AVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTS-LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp HHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEE-ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred cccccccCcccceEEEcCCCCCcceEEECCCC-eEEEE-EecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 45566778889999999999 66655 67899999999976 56777777665432 1
Q ss_pred ---EEEEecCCCEEEEEeC---CCc----------EEEEECCCCc
Q psy10114 774 ---YLAMSPDGEAIVTGAG---DET----------LRFWNVFSKV 802 (819)
Q Consensus 774 ---sLafSpDG~~LaSGS~---DGt----------IrIWdl~s~~ 802 (819)
+..++|||++|+++.. |+. -.++|+.+++
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred eccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 1245899999998754 432 2889996554
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-06 Score=104.31 Aligned_cols=281 Identities=12% Similarity=0.071 Sum_probs=182.6
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--------CCe-EEEEEcCCCCEEEEEecCceEEEeecCCceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--------NSV-TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--------~~V-tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~t 592 (819)
.++.++.++.++.|+-+|..+|+..-..+..... ..+ ..++. .+..+++++.||.|..+|.++|+.+.+
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 3567777888899999999999875433322110 001 11222 356888999999999999999999988
Q ss_pred EecCC----CCeE-EEEeCCceeeeccC------CCeEEEEECCCCCccceEEEec------------------------
Q psy10114 593 LVGHT----ARVG-ALAWNGDMLSSGSR------DRMILQRDVRTPNSQSERRLVG------------------------ 637 (819)
Q Consensus 593 l~gHs----~~V~-sLawng~~LaSGS~------DGtI~IWDi~t~~~~~v~~l~g------------------------ 637 (819)
..... ..+. +....++.+++++. +|.|..+|.++++.........
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 76421 1111 11123444554432 5899999999887433222110
Q ss_pred -----ccCCeEEEEECCCCCEEEEEECCC-------------------eEEEEECCCCceeEEEecC--C-------CCE
Q psy10114 638 -----HRQEVCGLKWSPDNQYLASGGNDN-------------------RLYVWNLHSMSPLQTYTEH--L-------AAV 684 (819)
Q Consensus 638 -----H~~~VtsLafSpdg~~LaSGS~DG-------------------tI~IWDl~t~~~i~t~~~h--~-------~~V 684 (819)
+......+++++++..++.++.++ .|..+|.++++.+..++.. . .+.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc
Confidence 011122467888888888887766 3999999999998888642 1 233
Q ss_pred EEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCC-------------Ce---------------------
Q psy10114 685 KAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS-------------QV--------------------- 728 (819)
Q Consensus 685 tsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s-------------~V--------------------- 728 (819)
....+..+|+ .+++.++ .+|.+.++|..+|+.+....... ++
T Consensus 303 ~~~d~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~ 380 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQAP--KNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (668)
T ss_dssp EEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred EEEEeccCCcEEEEEEEEC--CCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence 3233333554 2455543 89999999999999874432111 00
Q ss_pred ---EEEEEccCCCEEEEEEe----------------------------------cCCCeEEEEECCCCcEEEEEecCCCC
Q psy10114 729 ---CNLAWSKHSSELVSTHG----------------------------------YSQNQILVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 729 ---~sLafSpdg~~LastsG----------------------------------ssDg~I~IWDl~s~k~l~sl~gH~~~ 771 (819)
..++++|+...+++... ..+|.|..||..+++.+.+...+. .
T Consensus 381 ~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~ 459 (668)
T 1kv9_A 381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-H 459 (668)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-S
T ss_pred cCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-C
Confidence 12677887777665211 123789999999999988876443 3
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 772 VLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
.....+...|.++++|+.||.|+.||..+++...+.
T Consensus 460 ~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 460 WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CcCceeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 333445557889999999999999999998876443
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.7e-07 Score=103.73 Aligned_cols=250 Identities=8% Similarity=-0.042 Sum_probs=163.0
Q ss_pred EEEecCCeEEEEE----------CCCeEEEEEcCCCceEEEEeccCC-----CCCeEEEEEcCCCCEEEEEec--CceEE
Q psy10114 518 LVDWSSQNVLSVG----------LGSCVYLWSACTSQVTRLCDLSAD-----GNSVTSVAWNERGNLVAVGTH--HGYVQ 580 (819)
Q Consensus 518 ~ldwS~~~LLa~g----------~Dg~V~LWd~~tg~~~~l~~l~~h-----~~~VtsLafSpdG~~LAsGs~--DGtI~ 580 (819)
.++++++.+..+. .++.|.+||..+++......+.+. ......++++|||++++++.. +..|.
T Consensus 71 ~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~ 150 (368)
T 1mda_H 71 VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAG 150 (368)
T ss_dssp EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEE
Confidence 3455666666665 368899999999998775554311 124567999999999999875 46788
Q ss_pred E--eecCCceEEEEEecCCCCeEEEEeCC-ceeeeccCCCeEEEEECCC-----CCccce--EEEecccCCeEEEEECCC
Q psy10114 581 V--WDVSVAKQVHKLVGHTARVGALAWNG-DMLSSGSRDRMILQRDVRT-----PNSQSE--RRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 581 I--WDl~tgk~i~tl~gHs~~V~sLawng-~~LaSGS~DGtI~IWDi~t-----~~~~~v--~~l~gH~~~VtsLafSpd 650 (819)
+ +|..+ +.++.... . ..+..++ ..+++.+.||.+.+.|..+ ++.... ..+.-...+. . +++
T Consensus 151 V~~iD~~t---v~~i~v~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~ 221 (368)
T 1mda_H 151 LSVPGASD---DQLTKSAS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANY 221 (368)
T ss_dssp EEETTTEE---EEEEECSS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETT
T ss_pred EEEEchhh---ceEEECCC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-ccc
Confidence 8 99877 44443211 1 1122333 3556777888888888876 221100 0011112222 3 566
Q ss_pred CCEEEEEECCCeEEEEECCCCc--eeEEEecC----------CCCEEEEEEcCCCCeEEEEEccC-C-----CCeEEEEE
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMS--PLQTYTEH----------LAAVKAIAWSPHHHGLLASGGGT-A-----DRCIRFWN 712 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~--~i~t~~~h----------~~~VtsLafSPdg~~LLaSGgGs-~-----DgtIrIWD 712 (819)
+..++..+. +.|.+.|..+.. .+..+... ......++++|+++.++++.... . ++.+.++|
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD 300 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEE
T ss_pred CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEE
Confidence 677766667 999999986543 22222110 11112268999999888764200 1 23456999
Q ss_pred CCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe
Q psy10114 713 TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMS 778 (819)
Q Consensus 713 l~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafS 778 (819)
+.+++.+..+..+.....++|++||+.++++.+..++.|.++|..+++.+.++..... ...+++.
T Consensus 301 ~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~ 365 (368)
T 1mda_H 301 ASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQ 365 (368)
T ss_dssp SSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECC
T ss_pred CCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEee
Confidence 9999999988877789999999999977665443589999999999999998875543 3455554
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=4.3e-06 Score=88.92 Aligned_cols=240 Identities=8% Similarity=-0.040 Sum_probs=153.6
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec--------------------CCCCeEEEEeC--Cceeeec
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG--------------------HTARVGALAWN--GDMLSSG 613 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g--------------------Hs~~V~sLawn--g~~LaSG 613 (819)
....+++|+++|++++++..++.|..||..+++.. .+.. .......++++ +..|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 44567899999998888989999999998765433 2221 01357788885 4566666
Q ss_pred cCCCeEEEEECCCCCccceEEE-ec-ccCCeEEEEECC-CCCEEEEEEC-----------------CCeEEEEECCCCce
Q psy10114 614 SRDRMILQRDVRTPNSQSERRL-VG-HRQEVCGLKWSP-DNQYLASGGN-----------------DNRLYVWNLHSMSP 673 (819)
Q Consensus 614 S~DGtI~IWDi~t~~~~~v~~l-~g-H~~~VtsLafSp-dg~~LaSGS~-----------------DGtI~IWDl~t~~~ 673 (819)
...+.|..+|..++........ .+ ......++++.+ +|+..++-.. ++.|..+|..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 5555688888765432111111 11 123478899999 9987666432 36799999877654
Q ss_pred eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--eeEEE-cCCCCeEEEEEccCCCEEEEEEe-----
Q psy10114 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--PMQCV-DTGSQVCNLAWSKHSSELVSTHG----- 745 (819)
Q Consensus 674 i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l-~~~s~V~sLafSpdg~~LastsG----- 745 (819)
..... .......++++++++.++++.. .++.|..+|+.... ....+ .... ...++++++|+..++..+
T Consensus 178 ~~~~~-~~~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 178 TLLLK-ELHVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEE-EESCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEecc-CCccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 32222 2233467999999997777754 56899999987531 11111 2223 788999999986666432
Q ss_pred ---cCCCeEEEEECCCCcEEEEEecCC----CCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 746 ---YSQNQILVWKYPTLTQVAKLTGHS----YRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 746 ---ssDg~I~IWDl~s~k~l~sl~gH~----~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
...+.|..+|. .++.+..+.... ..++++++ .+|+..++...++.|..+++..+.
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 12466888885 577777776442 34667776 466666666678899999986544
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.6e-06 Score=101.84 Aligned_cols=281 Identities=10% Similarity=0.021 Sum_probs=176.6
Q ss_pred CCeEEEEEC-CCeEEEEEc-CCCceEEEEeccCCCC---------CeEEEEEcCCCCE----EEEEecCceEEEeecCCc
Q psy10114 523 SQNVLSVGL-GSCVYLWSA-CTSQVTRLCDLSADGN---------SVTSVAWNERGNL----VAVGTHHGYVQVWDVSVA 587 (819)
Q Consensus 523 ~~~LLa~g~-Dg~V~LWd~-~tg~~~~l~~l~~h~~---------~VtsLafSpdG~~----LAsGs~DGtI~IWDl~tg 587 (819)
++.+.+++. ++.|+-+|. .+|+..=..+...... ....++.+|.+.. +++++.|+.+.-+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 566666776 788999999 8888654333322110 0123455443444 888999999999999999
Q ss_pred eEEEEEecCCC----CeE-EEEeCCceeeecc------CCCeEEEEECCCCCccceEEEeccc-----------------
Q psy10114 588 KQVHKLVGHTA----RVG-ALAWNGDMLSSGS------RDRMILQRDVRTPNSQSERRLVGHR----------------- 639 (819)
Q Consensus 588 k~i~tl~gHs~----~V~-sLawng~~LaSGS------~DGtI~IWDi~t~~~~~v~~l~gH~----------------- 639 (819)
+.+.+...... .+. +....++.+++++ .+|.|..+|.++++...........
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 99887653220 111 1112234555554 4899999999988743222211100
Q ss_pred ------------------CCe-EEEEECCCCCEEEEEECC----------------CeEEEEECCCCceeEEEecCCC--
Q psy10114 640 ------------------QEV-CGLKWSPDNQYLASGGND----------------NRLYVWNLHSMSPLQTYTEHLA-- 682 (819)
Q Consensus 640 ------------------~~V-tsLafSpdg~~LaSGS~D----------------GtI~IWDl~t~~~i~t~~~h~~-- 682 (819)
..+ ..+++.++...++.++.+ +.|..+|.++++.+..++....
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~ 301 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE 301 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc
Confidence 000 134566777777777655 3899999999999888764321
Q ss_pred --------CEEEEEEc-CCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCC--------------Ce---------
Q psy10114 683 --------AVKAIAWS-PHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS--------------QV--------- 728 (819)
Q Consensus 683 --------~VtsLafS-Pdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s--------------~V--------- 728 (819)
++. +... .+|+ .+++.++ .+|.+.++|.++|+.+....... ++
T Consensus 302 wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 302 WDYAGVNVMML-SEQKDKDGKARKLLTHPD--RNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp SCCCCCCCCEE-EEEECTTSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred ccccCCCccEE-EeccccCCcEEEEEEEEC--CCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 121 2222 4564 3455443 89999999999999887654221 11
Q ss_pred -----------------EEEEEccCCCEEEEEEe-------------------------------c------CCCeEEEE
Q psy10114 729 -----------------CNLAWSKHSSELVSTHG-------------------------------Y------SQNQILVW 754 (819)
Q Consensus 729 -----------------~sLafSpdg~~LastsG-------------------------------s------sDg~I~IW 754 (819)
..++++|+...+++... . .+|.+..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 24567777666655210 1 34789999
Q ss_pred ECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 755 Dl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
|..+++.+.+.... .++.+-.+...|..++.++.||.++.+|..+++...+.
T Consensus 459 D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 459 NAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 99999998877522 12222122335678888999999999999999876544
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.75 E-value=6.1e-07 Score=106.48 Aligned_cols=264 Identities=14% Similarity=0.127 Sum_probs=168.6
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--CCeEE-EEEcCCCCEEEEEec------CceEEEeecCCceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--NSVTS-VAWNERGNLVAVGTH------HGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--~~Vts-LafSpdG~~LAsGs~------DGtI~IWDl~tgk~i~t 592 (819)
.++.++.++.++.|+.+|..+|+..-........ ..+.+ ... .+..++++.. +|.|..+|.++|+.+.+
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4567888888999999999999876544432111 11111 111 1345666543 58999999999999988
Q ss_pred EecCC---C----------------------------CeEEEEe--CCceeeeccCCC-------------------eEE
Q psy10114 593 LVGHT---A----------------------------RVGALAW--NGDMLSSGSRDR-------------------MIL 620 (819)
Q Consensus 593 l~gHs---~----------------------------~V~sLaw--ng~~LaSGS~DG-------------------tI~ 620 (819)
+.... . ....+++ ..+.++.++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 76311 0 0012455 346777777665 499
Q ss_pred EEECCCCCccceEEEeccc-------CCeEEEEECCCCC---EEEEEECCCeEEEEECCCCceeEEEecCCC--------
Q psy10114 621 QRDVRTPNSQSERRLVGHR-------QEVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYTEHLA-------- 682 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~-------~~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~-------- 682 (819)
.+|.++++.........|. ..........+|+ .++.++.+|.++++|.++|+.+........
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 9999998754333333232 2222223333565 688899999999999999998754432210
Q ss_pred ----CE------------------------EEEEEcCCCCeEEEEE---------------------------------c
Q psy10114 683 ----AV------------------------KAIAWSPHHHGLLASG---------------------------------G 701 (819)
Q Consensus 683 ----~V------------------------tsLafSPdg~~LLaSG---------------------------------g 701 (819)
++ ..++++|+...+++.. .
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 00 0156777766555421 0
Q ss_pred cCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCE-EEEEEecC
Q psy10114 702 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRV-LYLAMSPD 780 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~V-tsLafSpD 780 (819)
...++.|..||..+|+.+.............+...+..+++ |..|+.++.||..+++.+..++...+.. .-+.+..+
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~--g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQ--GTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEE--ECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 11348899999999999888766555554555567888888 7889999999999999999887543211 22344457
Q ss_pred CC-EEEEEeC
Q psy10114 781 GE-AIVTGAG 789 (819)
Q Consensus 781 G~-~LaSGS~ 789 (819)
|+ +++.++.
T Consensus 512 G~~yva~~~G 521 (668)
T 1kv9_A 512 GRQYVAIMAG 521 (668)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 76 5555543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.71 E-value=2.6e-05 Score=80.43 Aligned_cols=232 Identities=9% Similarity=-0.001 Sum_probs=145.5
Q ss_pred CEEEEEecCceEEEeecCCceE-----EEEEecCCCCeEEEEeC--Cc-eeeeccCCCeEEEEECCCCCccceEEEeccc
Q psy10114 568 NLVAVGTHHGYVQVWDVSVAKQ-----VHKLVGHTARVGALAWN--GD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHR 639 (819)
Q Consensus 568 ~~LAsGs~DGtI~IWDl~tgk~-----i~tl~gHs~~V~sLawn--g~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~ 639 (819)
.+|..+.. +.|+.+|++.... ...+........+++++ ++ .+++-..++.|..+|...... ........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEECCC
Confidence 44555553 4788888765431 11122222456788884 33 455556678999999876542 12222223
Q ss_pred CCeEEEEECCCCCEEEE-EECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 640 QEVCGLKWSPDNQYLAS-GGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaS-GS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
....++++++++..+.. ....+.|.++|...................++++|++..++++..+...+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 56889999997665554 4556789999986543322222223567899999987777777542224788888876433
Q ss_pred eEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 719 MQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 719 v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
...+ ........++++++++.++.+ ....+.|.++|.........+.+ .....+++.. ++..+++...++.|..+
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~-d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWV-DAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEE-ECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 3333 223468899999998888775 45678999999875544333333 3345677764 34444444456899999
Q ss_pred ECCCCceecc
Q psy10114 797 NVFSKVRSQR 806 (819)
Q Consensus 797 dl~s~~~~~k 806 (819)
|..+++....
T Consensus 235 d~~~g~~~~~ 244 (267)
T 1npe_A 235 DLAISKEMDT 244 (267)
T ss_dssp ETTTTEEEEE
T ss_pred eCCCCCceEE
Confidence 9988765443
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.71 E-value=4e-06 Score=98.08 Aligned_cols=279 Identities=14% Similarity=0.072 Sum_probs=174.0
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCC-------eEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNS-------VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~-------VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
++.++.++.++.|+-+|+.+|+..-.......... -..++. .+..+++++.|+.|.-+|.++|+.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 56666677655699999999987544443321110 012222 356788899999999999999999887764
Q ss_pred CCC----CeE-E-EEeCC----c-eeeecc------CCCeEEEEECCCCCccceEEEec-c-------------------
Q psy10114 596 HTA----RVG-A-LAWNG----D-MLSSGS------RDRMILQRDVRTPNSQSERRLVG-H------------------- 638 (819)
Q Consensus 596 Hs~----~V~-s-Lawng----~-~LaSGS------~DGtI~IWDi~t~~~~~v~~l~g-H------------------- 638 (819)
... .+. + +..++ . .+++++ .+|.|..+|.++++......... +
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 321 111 1 11222 1 565654 37899999999877432211100 0
Q ss_pred -------------------cCCeEEEEECCCCCEEEEEEC--------------------C----CeEEEEECCCCceeE
Q psy10114 639 -------------------RQEVCGLKWSPDNQYLASGGN--------------------D----NRLYVWNLHSMSPLQ 675 (819)
Q Consensus 639 -------------------~~~VtsLafSpdg~~LaSGS~--------------------D----GtI~IWDl~t~~~i~ 675 (819)
...-..++++++...++.++. | +.|..+|.++++.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 000013456677777777663 2 589999999999998
Q ss_pred EEec--CC--------CCEEEEEEc-CCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCCCe--------------
Q psy10114 676 TYTE--HL--------AAVKAIAWS-PHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQV-------------- 728 (819)
Q Consensus 676 t~~~--h~--------~~VtsLafS-Pdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V-------------- 728 (819)
.++. |. .++. +... .+|+ .+++.++ .+|.++++|..+|+.+........+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHAD--RNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEEC--CCceEEEEECCCCCEecccccccCccccccccccCCCEe
Confidence 8763 21 1221 1221 4564 3455554 8999999999999988766432200
Q ss_pred --------------------------------EEEEEccCCCEEEEEEe-------------------------------
Q psy10114 729 --------------------------------CNLAWSKHSSELVSTHG------------------------------- 745 (819)
Q Consensus 729 --------------------------------~sLafSpdg~~LastsG------------------------------- 745 (819)
..++++|+...+++...
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 13456666665555321
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
..+|.|..||..+++.+.+..... ++..-.....|..++.|+.||.++.||..+++...+.
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 135789999999999988776432 2222222234668888999999999999999876543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4.9e-06 Score=88.22 Aligned_cols=196 Identities=9% Similarity=0.043 Sum_probs=139.5
Q ss_pred eEEEEEecC-CeEEEEEC---CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceE
Q psy10114 515 YLNLVDWSS-QNVLSVGL---GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQ 589 (819)
Q Consensus 515 yv~~ldwS~-~~LLa~g~---Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~ 589 (819)
+...+.+++ +.+..++. ++.|.+.|..+++......+..+ .....+++. |+.|+.++ .++.+.++|.++.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 345567776 55555442 58999999999998876665432 233355555 55665554 578999999999999
Q ss_pred EEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEeccc---CCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 590 VHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR---QEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 590 i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~---~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
+.++......-..++.+++.++++..++.|.+.|..+.+........... ..+..+.|. +|...+....++.|.+.
T Consensus 99 ~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 99 IKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 99886332223458888887777778899999999886533222222211 236788888 77656665568899999
Q ss_pred ECCCCceeEEEecC-------------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 667 NLHSMSPLQTYTEH-------------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 667 Dl~t~~~i~t~~~h-------------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
|..+++.+..+... ......|+|+|+++.+++++. ..+++...++...
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk--~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK--LWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET--TCSEEEEEEEEEC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC--CCCeEEEEEEecc
Confidence 99999998888632 135689999999999999986 7788888887543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4.6e-06 Score=88.40 Aligned_cols=192 Identities=13% Similarity=0.119 Sum_probs=138.2
Q ss_pred CeEEEEEcCCCCEEEEEe-c--CceEEEeecCCceEEEEEecCC-CCeEEEEeCCcee-eeccCCCeEEEEECCCCCccc
Q psy10114 557 SVTSVAWNERGNLVAVGT-H--HGYVQVWDVSVAKQVHKLVGHT-ARVGALAWNGDML-SSGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs-~--DGtI~IWDl~tgk~i~tl~gHs-~~V~sLawng~~L-aSGS~DGtI~IWDi~t~~~~~ 631 (819)
....++|+++| .|+.++ . ++.|.+.|.++++.+.++.-.. .....++++++.| ++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v-- 98 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN-- 98 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE--
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE--
Confidence 46899999987 455543 2 5799999999999998876322 2334577766655 4455689999999987653
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCC-----CCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHL-----AAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~-----~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
+..+...... +..+++||+.++++..+++|.++|..+.+.+..+.-.. .....+.|. ++ .+++... .++
T Consensus 99 ~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~--~~~ 172 (266)
T 2iwa_A 99 IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIW--QTD 172 (266)
T ss_dssp EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEET--TSS
T ss_pred EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecC--CCC
Confidence 3444322122 23345577777777778999999999998888776321 246778888 56 4666653 578
Q ss_pred eEEEEECCCCceeEEEcCC--------------CCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 707 CIRFWNTLTGQPMQCVDTG--------------SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~~~--------------s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
.|.+.|..+++.+..++.+ .....++++|+++.++++ +...+.+...++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT-gk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT-GKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE-ETTCSEEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE-CCCCCeEEEEEEec
Confidence 9999999999999888653 356899999999988886 56678888887654
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-05 Score=93.66 Aligned_cols=265 Identities=13% Similarity=0.089 Sum_probs=165.5
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--CCeEE-EEEcCCCCEEEEEec------CceEEEeecCCceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--NSVTS-VAWNERGNLVAVGTH------HGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--~~Vts-LafSpdG~~LAsGs~------DGtI~IWDl~tgk~i~t 592 (819)
.++.++.++.++.|+.+|..+|+..-......+. ..+.+ ... .+..+++++. +|.|..+|.++|+.+.+
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 4677888888999999999999876544443211 01211 111 1346666665 79999999999999888
Q ss_pred EecCCCC-------------------------------------e-EEEEeC--CceeeeccC------------C----
Q psy10114 593 LVGHTAR-------------------------------------V-GALAWN--GDMLSSGSR------------D---- 616 (819)
Q Consensus 593 l~gHs~~-------------------------------------V-~sLawn--g~~LaSGS~------------D---- 616 (819)
+...... + ..++++ .+.++.++. |
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 7642211 0 123333 234444432 1
Q ss_pred CeEEEEECCCCCccceEEEeccc-------CCeEEEEECCCCC---EEEEEECCCeEEEEECCCCceeEEEecCC-----
Q psy10114 617 RMILQRDVRTPNSQSERRLVGHR-------QEVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYTEHL----- 681 (819)
Q Consensus 617 GtI~IWDi~t~~~~~v~~l~gH~-------~~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~~h~----- 681 (819)
+.|..+|.++++.........|. ....-+....+|+ .++.++.+|.+.++|.++++.+..+....
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 36899999988754333333221 1111122224674 57788899999999999999887765321
Q ss_pred --------CCE--------------------------EEEEEcCCCCeEEEEEc---------------c----------
Q psy10114 682 --------AAV--------------------------KAIAWSPHHHGLLASGG---------------G---------- 702 (819)
Q Consensus 682 --------~~V--------------------------tsLafSPdg~~LLaSGg---------------G---------- 702 (819)
.++ ..++++|+...+++... |
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 13567887776655431 0
Q ss_pred ---------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC-E
Q psy10114 703 ---------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR-V 772 (819)
Q Consensus 703 ---------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~-V 772 (819)
..++.+..||..+|+.+........+........+..+++ +..|+.+..+|.++++.+.++...... .
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~--g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 509 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWY--ATLDGYLKALDNKDGKELWNFKMPSGGIG 509 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEE--EcCCCeEEEEECCCCCEEEEEeCCCCcEe
Confidence 1358999999999999888866555444344445667777 778999999999999999988743321 1
Q ss_pred EEEEEecCCCEEE-EEeCC
Q psy10114 773 LYLAMSPDGEAIV-TGAGD 790 (819)
Q Consensus 773 tsLafSpDG~~La-SGS~D 790 (819)
..+.+..+|+.++ +.+.+
T Consensus 510 ~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 510 SPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp CCEEEEETTEEEEEEEECC
T ss_pred eeEEEEECCEEEEEEECCC
Confidence 2234556776444 34443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.1e-06 Score=92.51 Aligned_cols=209 Identities=13% Similarity=0.098 Sum_probs=137.9
Q ss_pred eEEEEEecC-CeEEEEEC------CCeEEEEEcCCCceEEEEeccC----CCCCeEEEEEcCCCCEE-EEEe---cCceE
Q psy10114 515 YLNLVDWSS-QNVLSVGL------GSCVYLWSACTSQVTRLCDLSA----DGNSVTSVAWNERGNLV-AVGT---HHGYV 579 (819)
Q Consensus 515 yv~~ldwS~-~~LLa~g~------Dg~V~LWd~~tg~~~~l~~l~~----h~~~VtsLafSpdG~~L-AsGs---~DGtI 579 (819)
.+..+.+++ +.+..+.. ++.|.+||..+++..+...+.. +...+..+++++++..+ ++.. .++.|
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i 147 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAAL 147 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEE
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeE
Confidence 466677775 45666654 4789999999998666555532 23456899999865555 4444 57899
Q ss_pred EEeecCCceEEEEEecCCCCe---EEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEE
Q psy10114 580 QVWDVSVAKQVHKLVGHTARV---GALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLAS 656 (819)
Q Consensus 580 ~IWDl~tgk~i~tl~gHs~~V---~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaS 656 (819)
.+||..+++..+.+.+|.... ..+..++..+.+++.+|.+..|. ..+.+++|+|||+.|++
T Consensus 148 ~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~ly~ 211 (343)
T 2qe8_A 148 IRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEWLYL 211 (343)
T ss_dssp EEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCEEEE
T ss_pred EEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee----------------cccceeEeccCCCEEEE
Confidence 999999888877776543211 22344666777777777765442 23578999999998888
Q ss_pred EECCC-eEEEEECC---CCc-----eeE--EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-
Q psy10114 657 GGNDN-RLYVWNLH---SMS-----PLQ--TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT- 724 (819)
Q Consensus 657 GS~DG-tI~IWDl~---t~~-----~i~--t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~- 724 (819)
+..++ .+..++.. .+. ... ...++.+....++++++|. ++++.. .++.|.+||..+|+.......
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~--~~~~V~~~d~~~G~~~~~~~~~ 288 (343)
T 2qe8_A 212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDL--AHSAIGVITSADRAYKLLVTDE 288 (343)
T ss_dssp EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEG--GGTEEEEEETTTTEEEEEEECG
T ss_pred EeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC-EEEEcc--CCCeEEEEECCCCCEEEEEECC
Confidence 87766 56555532 111 000 1112334556789999986 555543 688999999866664333322
Q ss_pred -CCCeEEEEEccCCCEEEE
Q psy10114 725 -GSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 725 -~s~V~sLafSpdg~~Las 742 (819)
.....++++.++++.+++
T Consensus 289 ~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 289 KLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp GGSCEEEEEECTTSCEEEE
T ss_pred ceecCCeeEECCCCcEEEE
Confidence 356899999999876666
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-05 Score=94.05 Aligned_cols=233 Identities=12% Similarity=0.061 Sum_probs=158.3
Q ss_pred cCCeEEEEEC-CCeEEEEEcCCCceEEEEeccCCCCCeEEEEE-c-CCCCEEEEEe------------------cCceEE
Q psy10114 522 SSQNVLSVGL-GSCVYLWSACTSQVTRLCDLSADGNSVTSVAW-N-ERGNLVAVGT------------------HHGYVQ 580 (819)
Q Consensus 522 S~~~LLa~g~-Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLaf-S-pdG~~LAsGs------------------~DGtI~ 580 (819)
+++.+..... ++.|.+.|+.+.+..++.++.. ......+++ + |+++++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 4556555554 4669999999999888777653 345888998 5 8999999885 346899
Q ss_pred EeecCCceEEEEEec-CCCCeEEEEeCCceeeeccCC--------------------------------------CeEEE
Q psy10114 581 VWDVSVAKQVHKLVG-HTARVGALAWNGDMLSSGSRD--------------------------------------RMILQ 621 (819)
Q Consensus 581 IWDl~tgk~i~tl~g-Hs~~V~sLawng~~LaSGS~D--------------------------------------GtI~I 621 (819)
+.|.++.+...++.- ....-..+..+|+++++.+.+ +.|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999988887762 122222233355555544432 24677
Q ss_pred EECCCCCccc-eEEEecccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCCCc------------eeEEEecCCCCEEEE
Q psy10114 622 RDVRTPNSQS-ERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHSMS------------PLQTYTEHLAAVKAI 687 (819)
Q Consensus 622 WDi~t~~~~~-v~~l~gH~~~VtsLafSpdg~~LaSGS-~DGtI~IWDl~t~~------------~i~t~~~h~~~VtsL 687 (819)
.|.++.+... ...+. -.....++.++|||+++++++ .+++|.++|+.+.+ ...... -......+
T Consensus 259 ID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~ 336 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 336 (595)
T ss_dssp EECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEE
T ss_pred EeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceE
Confidence 7777621111 22222 234567899999999876665 57899999998653 222222 33557889
Q ss_pred EEcCCCCeEEEEEccCCCCeEEEEECCC----------CceeEEEcCCCCeEEE------EEccCCCEEEEEEecCCCeE
Q psy10114 688 AWSPHHHGLLASGGGTADRCIRFWNTLT----------GQPMQCVDTGSQVCNL------AWSKHSSELVSTHGYSQNQI 751 (819)
Q Consensus 688 afSPdg~~LLaSGgGs~DgtIrIWDl~t----------g~~v~~l~~~s~V~sL------afSpdg~~LastsGssDg~I 751 (819)
+|+|+| .++++.. .|++|.+||+.+ .+.+.+++.+.+.-.. ..+|||+++++....+..++
T Consensus 337 aF~~dG-~aY~t~~--ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 337 AFDGRG-NAYTSLF--LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EECTTS-EEEEEET--TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred EECCCC-eEEEEEe--cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 999999 6777765 899999999987 5667777776665323 45799999999876664444
Q ss_pred -----------EEEECCCCc
Q psy10114 752 -----------LVWKYPTLT 760 (819)
Q Consensus 752 -----------~IWDl~s~k 760 (819)
.++|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 889986433
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.55 E-value=5.3e-06 Score=87.62 Aligned_cols=184 Identities=15% Similarity=0.191 Sum_probs=129.6
Q ss_pred cceEEEEEecCCe-EEEEECCC--eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCce
Q psy10114 513 DFYLNLVDWSSQN-VLSVGLGS--CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAK 588 (819)
Q Consensus 513 Dfyv~~ldwS~~~-LLa~g~Dg--~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk 588 (819)
.-+...+.++++. +.+.|.+| .|+..|..+++......+.. ........++++.|.... .++.+.++|.++.+
T Consensus 42 ~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 42 KAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK---RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp TCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT---TCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred CcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC---ccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 3455667777665 44555554 89999999999887666643 232222223455666655 57899999999999
Q ss_pred EEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEeccc---CCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 589 QVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR---QEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 589 ~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~---~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
.+.++.... .=..++++++.|+.+..++.|.++|..+.+........... ..+..+.|. +|+..+..-.++.|.+
T Consensus 119 ~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 119 QVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 999998533 22467788888877777889999999886643222222222 335567776 7766666667889999
Q ss_pred EECCCCceeEEEecC------------CCCEEEEEEcCCCCeEEEEEc
Q psy10114 666 WNLHSMSPLQTYTEH------------LAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 666 WDl~t~~~i~t~~~h------------~~~VtsLafSPdg~~LLaSGg 701 (819)
.|.++++.+..+... ....+.||++|+++.++++|-
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999998887642 135689999999999999873
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.55 E-value=8.2e-06 Score=92.36 Aligned_cols=217 Identities=12% Similarity=0.068 Sum_probs=143.0
Q ss_pred CCeEE-EEECCCeEEEEEcCCC----ceEEEEe---c--cCCCCCeEEEEEcCCCCEEEEEecC------ceEEEeecCC
Q psy10114 523 SQNVL-SVGLGSCVYLWSACTS----QVTRLCD---L--SADGNSVTSVAWNERGNLVAVGTHH------GYVQVWDVSV 586 (819)
Q Consensus 523 ~~~LL-a~g~Dg~V~LWd~~tg----~~~~l~~---l--~~h~~~VtsLafSpdG~~LAsGs~D------GtI~IWDl~t 586 (819)
+++++ .+..++.|++.|..+. ++.+..+ + +.....-..+..+|+| .++++..+ |.|.+.|.++
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 44544 4455678999998755 4444331 1 1111245667888999 66665554 7899999999
Q ss_pred ceEEEEEecCCCC---eEEEEe--CCceeeecc-------------------CCCeEEEEECCCCCccceEEEecc--cC
Q psy10114 587 AKQVHKLVGHTAR---VGALAW--NGDMLSSGS-------------------RDRMILQRDVRTPNSQSERRLVGH--RQ 640 (819)
Q Consensus 587 gk~i~tl~gHs~~---V~sLaw--ng~~LaSGS-------------------~DGtI~IWDi~t~~~~~v~~l~gH--~~ 640 (819)
++.+.++...... -..+.| +++.+++.. .+.+|.+||+.+.+ ...++... ..
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~g~ 251 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEENR 251 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTTEE
T ss_pred CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecCCCCC
Confidence 9999988732221 223555 566777764 47899999998754 33344331 23
Q ss_pred CeEEEEE--CCCCCEEEEEE------CCCeEEEEECCCCce--eEEE--ecC----------------CCCEEEEEEcCC
Q psy10114 641 EVCGLKW--SPDNQYLASGG------NDNRLYVWNLHSMSP--LQTY--TEH----------------LAAVKAIAWSPH 692 (819)
Q Consensus 641 ~VtsLaf--Spdg~~LaSGS------~DGtI~IWDl~t~~~--i~t~--~~h----------------~~~VtsLafSPd 692 (819)
....+.| +|+++++.+++ .+++|.+|....++- .+.+ ... ......|.+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3455656 99999888776 456887766554421 1111 110 244678999999
Q ss_pred CCeEEEEEccCCCCeEEEEECCC---CceeEEEcCCC---------------CeEEEEEccCCCEEEEEE
Q psy10114 693 HHGLLASGGGTADRCIRFWNTLT---GQPMQCVDTGS---------------QVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 693 g~~LLaSGgGs~DgtIrIWDl~t---g~~v~~l~~~s---------------~V~sLafSpdg~~Lasts 744 (819)
|++++++.- ..+.|.++|+.. .+.+..+..++ ....++++|||++++++.
T Consensus 332 GrfLYVSnr--g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLW--GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEET--TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeC--CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999875 578999999863 35566665552 358899999999999964
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.3e-05 Score=81.97 Aligned_cols=196 Identities=12% Similarity=0.053 Sum_probs=135.1
Q ss_pred CceeecCCCcCCcceEEEEEecCCeEEEEECC---CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecC
Q psy10114 501 PFKVLDAPELQDDFYLNLVDWSSQNVLSVGLG---SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THH 576 (819)
Q Consensus 501 P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~D---g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~D 576 (819)
.++++........-+..-+.++++.+..++.. +.|+..|..+++..+...+..+. .--.++.. ++.|... ..+
T Consensus 8 ~~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~--~~~ly~ltw~~ 84 (243)
T 3mbr_X 8 GYRVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAW--RDRLIQLTWRN 84 (243)
T ss_dssp CEEEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE--TTEEEEEESSS
T ss_pred ceEEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEe--CCEEEEEEeeC
Confidence 34444433233344667778888765555433 48999999999998876665321 11233443 4555554 468
Q ss_pred ceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEeccc---CCeEEEEECCCCCE
Q psy10114 577 GYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHR---QEVCGLKWSPDNQY 653 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~---~~VtsLafSpdg~~ 653 (819)
+.+.++|.++.+.+.++..... =..++++++.|+.+..++.|.++|..+.+.........+. ..++.+.|. +|+.
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~-Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGE-GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSC-CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred CEEEEEECCcCcEEEEEeCCCC-ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 8999999999999999985433 3577888887777777999999999886643222222222 245667765 6766
Q ss_pred EEEEECCCeEEEEECCCCceeEEEecC-------------CCCEEEEEEcCCCCeEEEEEc
Q psy10114 654 LASGGNDNRLYVWNLHSMSPLQTYTEH-------------LAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 654 LaSGS~DGtI~IWDl~t~~~i~t~~~h-------------~~~VtsLafSPdg~~LLaSGg 701 (819)
++..-.++.|.+.|.++++.+..+.-. ....+.||++|+++.++++|-
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 666657889999999999998887622 135688999999999999973
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.52 E-value=6.7e-05 Score=79.34 Aligned_cols=226 Identities=12% Similarity=0.092 Sum_probs=140.0
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccC-CC-eEEEEECCCCCccc
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSR-DR-MILQRDVRTPNSQS 631 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~-DG-tI~IWDi~t~~~~~ 631 (819)
.....++|+++|+++++-..++.|..+|.+.. ....+. .......++++ ++.+++... ++ .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 56788999999997777667899999997653 333333 24567888884 554444332 22 46667766655322
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce-eEEEe---------cCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP-LQTYT---------EHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~-i~t~~---------~h~~~VtsLafSPdg~~LLaSGg 701 (819)
.... .......+++..+++..+++...++.|.++|..+++. +.... ..-.....+ +++++.++++..
T Consensus 110 ~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 110 LLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 1111 1222345566565555555555688999999876431 11111 111234555 888888888764
Q ss_pred cCCCCeEEEEECCC-Cce--eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE--EEecCCCCEEEEE
Q psy10114 702 GTADRCIRFWNTLT-GQP--MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA--KLTGHSYRVLYLA 776 (819)
Q Consensus 702 Gs~DgtIrIWDl~t-g~~--v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~--sl~gH~~~VtsLa 776 (819)
..+.|..+|+.. ++. ...+........++++++|+..++ ....+.|.++|.. ++... .+.......++++
T Consensus 187 --~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va--~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 187 --EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA--THIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp --TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE--CBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred --CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEE--eCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 678999999875 331 122222245677899999986655 5567889999964 55432 2223335689999
Q ss_pred Ee---cCCCEEEEEeCCC
Q psy10114 777 MS---PDGEAIVTGAGDE 791 (819)
Q Consensus 777 fS---pDG~~LaSGS~DG 791 (819)
|. +|++.|+.++..+
T Consensus 262 ~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ECCSTTTTTEEEEEECTT
T ss_pred EecccCCCCEEEEECCCC
Confidence 98 8888777666543
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=7e-05 Score=87.98 Aligned_cols=260 Identities=15% Similarity=0.096 Sum_probs=160.1
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCC--CCeEE-EEEcCCCCEEEEEe------cCceEEEeecCCceEEEEEecC
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADG--NSVTS-VAWNERGNLVAVGT------HHGYVQVWDVSVAKQVHKLVGH 596 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--~~Vts-LafSpdG~~LAsGs------~DGtI~IWDl~tgk~i~tl~gH 596 (819)
++.++.|+.|+-+|..+|+..-......+. ..+++ .... ++ .+++++ .+|.|.-+|.++|+.+.++...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 778888999999999999876444433210 01211 1111 34 566665 3799999999999998887643
Q ss_pred CCC-------------------------------------eE-EEEe--CCceeeeccCC----------------CeEE
Q psy10114 597 TAR-------------------------------------VG-ALAW--NGDMLSSGSRD----------------RMIL 620 (819)
Q Consensus 597 s~~-------------------------------------V~-sLaw--ng~~LaSGS~D----------------GtI~ 620 (819)
... +. .+++ ..+.++.++.+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 00 1223 34455555443 4899
Q ss_pred EEECCCCCccceEEEecccC-------CeEEEEEC-CCC---CEEEEEECCCeEEEEECCCCceeEEEecCC--------
Q psy10114 621 QRDVRTPNSQSERRLVGHRQ-------EVCGLKWS-PDN---QYLASGGNDNRLYVWNLHSMSPLQTYTEHL-------- 681 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~-------~VtsLafS-pdg---~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~-------- 681 (819)
.+|.++++.........|.. ...-+... .+| +.++.++.+|.+++.|.++++.+.......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 99999887544333333321 11112222 467 467778899999999999999887665221
Q ss_pred -----CCE--------------------------EEEEEcCCCCeEEEEEc-----------------------------
Q psy10114 682 -----AAV--------------------------KAIAWSPHHHGLLASGG----------------------------- 701 (819)
Q Consensus 682 -----~~V--------------------------tsLafSPdg~~LLaSGg----------------------------- 701 (819)
.++ ..++++|+...+++...
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence 111 13566676654443210
Q ss_pred -cC------CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC-EE
Q psy10114 702 -GT------ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR-VL 773 (819)
Q Consensus 702 -Gs------~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~-Vt 773 (819)
.. .++.+.-||+.+|+.+.....+.+...-.....+..++. +..|+.++.+|.++++.+.+++...+. ..
T Consensus 442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~--gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFY--GTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEE--ECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 01 357899999999999887754433322223345667777 778999999999999999988743322 12
Q ss_pred EEEEecCCC-EEEEEeC
Q psy10114 774 YLAMSPDGE-AIVTGAG 789 (819)
Q Consensus 774 sLafSpDG~-~LaSGS~ 789 (819)
-+.+..+|+ ++++.+.
T Consensus 520 P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 520 PMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp CEEEEETTEEEEEEEEC
T ss_pred cEEEEeCCEEEEEEEcc
Confidence 245556776 4554443
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=0.00022 Score=85.60 Aligned_cols=271 Identities=12% Similarity=0.060 Sum_probs=180.5
Q ss_pred eEEEEEec-CCeEEEEECCCeEEEEEcCCCceEEEEecc-----CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce
Q psy10114 515 YLNLVDWS-SQNVLSVGLGSCVYLWSACTSQVTRLCDLS-----ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK 588 (819)
Q Consensus 515 yv~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~-----~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk 588 (819)
.+.++..+ .+.+..++.+ .|.++|..+++........ -....|.++...++|. |.+|+.++-|..++..+++
T Consensus 264 ~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~ 341 (795)
T 4a2l_A 264 YIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNR 341 (795)
T ss_dssp BEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGS
T ss_pred eEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCccc
Confidence 35556555 3466666665 7999999888765542211 1236799999999886 5677777779999876654
Q ss_pred EEEEEec-------CCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEE------ecccCCeEEEEECCCCCEE
Q psy10114 589 QVHKLVG-------HTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRL------VGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 589 ~i~tl~g-------Hs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l------~gH~~~VtsLafSpdg~~L 654 (819)
... +.. ....|.++..+ ...|..|+.++-|..+|..++........ ......|.++...++|+.|
T Consensus 342 ~~~-~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~l 420 (795)
T 4a2l_A 342 FKN-IRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLV 420 (795)
T ss_dssp SEE-ECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEE
T ss_pred ceE-EcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEE
Confidence 322 221 24568999885 44677888888899999876542211100 0123578999998888867
Q ss_pred EEEECCCeEEEEECCCCceeEEEe-----cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc------
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYT-----EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD------ 723 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~-----~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~------ 723 (819)
..|+.++-|..+|.++++.. .+. .....|.++...++|...+.+ . +-+..||..+++......
T Consensus 421 Wigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt----~-~Gl~~~~~~~~~~~~~~~~~~~~~ 494 (795)
T 4a2l_A 421 YIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT----L-SALVRFNPEQRSFTTIEKEKDGTP 494 (795)
T ss_dssp EEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE----S-SCEEEEETTTTEEEECCBCTTCCB
T ss_pred EEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe----c-CceeEEeCCCCeEEEccccccccc
Confidence 77888788999998877643 332 134579999999888744443 3 458889988765433221
Q ss_pred -CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-------cCCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 724 -TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-------GHSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 724 -~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-------gH~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
....|.++...++|+..+.+ . +.+..||..+++. .+. .....|.++..+++|+..++ +.+ -|..
T Consensus 495 ~~~~~i~~i~~d~~g~lWigt---~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~ 566 (795)
T 4a2l_A 495 VVSKQITTLFRDSHKRLWIGG---E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVG-TRE-GFYC 566 (795)
T ss_dssp CCCCCEEEEEECTTCCEEEEE---S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEE-ESS-CEEE
T ss_pred cCCceEEEEEECCCCCEEEEe---C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEE-eCC-Ccee
Confidence 12568899999888876652 3 5688888776654 332 12346899999999986654 444 5788
Q ss_pred EECCCCc
Q psy10114 796 WNVFSKV 802 (819)
Q Consensus 796 Wdl~s~~ 802 (819)
||..+++
T Consensus 567 ~d~~~~~ 573 (795)
T 4a2l_A 567 FNEKDKQ 573 (795)
T ss_dssp EETTTTE
T ss_pred ECCCCCc
Confidence 8876654
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=0.00027 Score=84.73 Aligned_cols=264 Identities=9% Similarity=0.023 Sum_probs=173.7
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec-------
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG------- 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g------- 595 (819)
.+.+..++.++.|..|+..+++...... ......|.++...++|. |.+|+.++-+..||..+++.......
T Consensus 183 ~g~lwigt~~~Gl~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l 260 (795)
T 4a2l_A 183 GDQIYIGTSTDGLYTYSITQKTFEKVIP-ILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSI 260 (795)
T ss_dssp TTEEEEEESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSC
T ss_pred CCCEEEEECCCCEEEEeCCCCeEEEecC-CCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCcccc
Confidence 4567777776679999988887654321 12346789998887775 45566544488999887664433221
Q ss_pred CCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEe--------cccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 596 HTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLV--------GHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 596 Hs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~--------gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
....|.++..+ ...+..|+.+ -|.++|..+... ..+. .....|.++...++|+ +-.|+.++-|..+
T Consensus 261 ~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~---~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~ 335 (795)
T 4a2l_A 261 SSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSF---ASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYY 335 (795)
T ss_dssp SCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEE---EEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEE
T ss_pred CCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeE---EEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEe
Confidence 13568999885 4466666665 578888776432 1221 1235699999998887 5567777889999
Q ss_pred ECCCCceeEEEec-------CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---------CCCCeEE
Q psy10114 667 NLHSMSPLQTYTE-------HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---------TGSQVCN 730 (819)
Q Consensus 667 Dl~t~~~i~t~~~-------h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---------~~s~V~s 730 (819)
|..++.. ..+.. ....|.++...++|...+.+ .++-|..||..+++...... ....|.+
T Consensus 336 ~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt----~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 410 (795)
T 4a2l_A 336 HPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGT----NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKA 410 (795)
T ss_dssp CGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEEEEE----SSSCEEEECTTTCCEEEECCC------CCSCSCEEE
T ss_pred CCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEE----CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEE
Confidence 8765442 22221 24569999999988744432 56679999988765443221 1356889
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-----cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-----GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-----gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
++..++|+.+.+ |..++.+..+|..+++.. .+. .....|.++...++|+..+. +. +-|..||..+++.
T Consensus 411 i~~d~~g~~lWi--gt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 411 VYVDEKKSLVYI--GTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQRSF 483 (795)
T ss_dssp EEEETTTTEEEE--EETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTTEE
T ss_pred EEEcCCCCEEEE--EeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCCeE
Confidence 998888884555 556677999998776543 332 13457999999888876554 44 4588898876543
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.47 E-value=0.00017 Score=84.38 Aligned_cols=266 Identities=12% Similarity=0.116 Sum_probs=163.2
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--CCeE---EEEEc-CCCC-EEEEEec------CceEEEeecCCce
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--NSVT---SVAWN-ERGN-LVAVGTH------HGYVQVWDVSVAK 588 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--~~Vt---sLafS-pdG~-~LAsGs~------DGtI~IWDl~tgk 588 (819)
.++.++.++.++.|+-.|..+|+..-......+. ..+. .+.=. .+|+ .+++++. +|.|.-+|.++|+
T Consensus 116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 4677888889999999999999876444443211 0111 11111 1233 6666653 7899999999999
Q ss_pred EEEEEecCCCCe-----------------------------------------EEEEeC--CceeeeccC----------
Q psy10114 589 QVHKLVGHTARV-----------------------------------------GALAWN--GDMLSSGSR---------- 615 (819)
Q Consensus 589 ~i~tl~gHs~~V-----------------------------------------~sLawn--g~~LaSGS~---------- 615 (819)
.+.+.......+ ..++++ .+.++.+..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 887664321110 012222 344443331
Q ss_pred ----------C----CeEEEEECCCCCccceEEEecccC-------CeEEEEEC-CCCC---EEEEEECCCeEEEEECCC
Q psy10114 616 ----------D----RMILQRDVRTPNSQSERRLVGHRQ-------EVCGLKWS-PDNQ---YLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 616 ----------D----GtI~IWDi~t~~~~~v~~l~gH~~-------~VtsLafS-pdg~---~LaSGS~DGtI~IWDl~t 670 (819)
| +.|..+|.++++.........|.. ...-+... .+|+ .++.++.+|.++++|.++
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 689999999987544333333321 11112222 4674 688899999999999999
Q ss_pred CceeEEEecCCC-------------CE--------------------------------EEEEEcCCCCeEEEEEc----
Q psy10114 671 MSPLQTYTEHLA-------------AV--------------------------------KAIAWSPHHHGLLASGG---- 701 (819)
Q Consensus 671 ~~~i~t~~~h~~-------------~V--------------------------------tsLafSPdg~~LLaSGg---- 701 (819)
++.+..+..... ++ ..++++|+...+++...
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 998877653320 00 12456666555544321
Q ss_pred --------------------------cCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEE
Q psy10114 702 --------------------------GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 702 --------------------------Gs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWD 755 (819)
...++.|.-||+.+|+.+.+.........-.....+..+++ |..|+.++.+|
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~--g~~dg~l~A~D 513 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFT--GTGDGYFKAFD 513 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEE--ECTTSEEEEEE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEE--ECCCCcEEEEE
Confidence 01368899999999999877765444333222335667777 77899999999
Q ss_pred CCCCcEEEEEecCCCCE-EEEEEecCCC-EEEEEeC
Q psy10114 756 YPTLTQVAKLTGHSYRV-LYLAMSPDGE-AIVTGAG 789 (819)
Q Consensus 756 l~s~k~l~sl~gH~~~V-tsLafSpDG~-~LaSGS~ 789 (819)
.++++.+.+++...+.. .-+.+..+|+ ++++.+.
T Consensus 514 ~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 514 AKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 99999999988543322 2256667886 4544443
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-05 Score=85.47 Aligned_cols=182 Identities=10% Similarity=0.035 Sum_probs=129.7
Q ss_pred ceEEEEEecCCe-EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEE-EEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWSSQN-VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA-VGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS~~~-LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LA-sGs~DGtI~IWDl~tgk~i~ 591 (819)
-+...+.++++. .++.|.+|.|+.+|..+++..+.. +... .--..+++. |+.|. ....++.+.++|.++.+.+.
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEE
Confidence 345667777765 455566788999999999987755 5431 122335554 44444 44568899999999999999
Q ss_pred EEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccC---CeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy10114 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ---EVCGLKWSPDNQYLASGGNDNRLYVWNL 668 (819)
Q Consensus 592 tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~---~VtsLafSpdg~~LaSGS~DGtI~IWDl 668 (819)
++.... .-..++++++.|+.+..++.|.++|..+.+.........+.. .+..+.|. +|+..+..-.++.|.+.|.
T Consensus 131 ti~~~~-eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 131 TTRYSG-EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EEECSS-CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred EEeCCC-ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 998533 335777888888877789999999998866432222222222 35677777 7766665557889999999
Q ss_pred CCCceeEEEecC-------------CCCEEEEEEcCCCCeEEEEEc
Q psy10114 669 HSMSPLQTYTEH-------------LAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 669 ~t~~~i~t~~~h-------------~~~VtsLafSPdg~~LLaSGg 701 (819)
++++.+..+... ....+.||++|+++.++++|-
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999988887632 135689999999999999873
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=0.0011 Score=70.83 Aligned_cols=230 Identities=11% Similarity=0.008 Sum_probs=146.0
Q ss_pred EEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecCceEEEeecCC----ceEEEEEecCCCCeEE
Q psy10114 528 SVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THHGYVQVWDVSV----AKQVHKLVGHTARVGA 602 (819)
Q Consensus 528 a~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~DGtI~IWDl~t----gk~i~tl~gHs~~V~s 602 (819)
..+..+.|+..|+.+.+...+.. ......+++|++++..|+.+ ..++.|..++... ......+...-.....
T Consensus 5 l~~~~~~I~~i~~~~~~~~~~~~---~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 5 FFTNRHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEECBSSEEEEETTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEECCCeEEEEECCCcceEehhc---CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 34556778999998877655422 24568899999876655555 4568999999875 2222223222234456
Q ss_pred EEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-C-CeEEEEECCCCceeEEE
Q psy10114 603 LAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-D-NRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 603 Lawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-D-GtI~IWDl~t~~~i~t~ 677 (819)
++++ ++..++-..++.|.+.|....... ...........+++++|++..++.+.. . +.|...++... ....+
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~ 158 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 158 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEE
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceE--EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEE
Confidence 6653 445556567889999998754321 222333456789999997666655544 2 68988887543 33333
Q ss_pred -ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 678 -TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 678 -~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
...-.....+++++++..++.+-. ..+.|..+|+........... ......+++. +..++.+ ....+.|..
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~-d~~~~~V~~ 233 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWT-DIINEAIFS 233 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEE-ETTTTEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEEC--CCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEE-ECCCCeEEE
Confidence 233456789999999888888765 678999999875433222222 2446778874 3455554 466789999
Q ss_pred EECCCCcEEEEEecC
Q psy10114 754 WKYPTLTQVAKLTGH 768 (819)
Q Consensus 754 WDl~s~k~l~sl~gH 768 (819)
++..+++.+..+...
T Consensus 234 ~~~~~g~~~~~i~~~ 248 (316)
T 1ijq_A 234 ANRLTGSDVNLLAEN 248 (316)
T ss_dssp EETTTCCCCEEEECS
T ss_pred EeCCCCcceEEEecC
Confidence 998777766666543
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00059 Score=75.24 Aligned_cols=244 Identities=10% Similarity=-0.014 Sum_probs=156.5
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
...+..+....|+..+..+++...+.. ....+..++|++.+..|+.. ...+.|..++.+.+.....+.........
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~---~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g 163 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG 163 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCC
T ss_pred cceeEeecCccceeeccCCCcEEEEec---CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccE
Confidence 334445566788888888776655432 24568899999766555544 46788999998766544434322223344
Q ss_pred EEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CC-CeEEEEECCCCceeEEE
Q psy10114 603 LAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-ND-NRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 603 Law---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~D-GtI~IWDl~t~~~i~t~ 677 (819)
+++ ++.+.++-...+.|.+.+++.... ............+++++|++..|.... .+ +.|...++.........
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~--~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCce--EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 555 344556666678888888875432 222333345678999998766655544 34 68999988654433333
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
...-.....|+++|++..++.+-. ..+.|..+|+........+. .......+++ .. ..++.+ ....+.|..++.
T Consensus 242 ~~~~~~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~-~~ly~t-d~~~~~V~~~~~ 316 (386)
T 3v65_B 242 DTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLPHPFAITV-FE-DSLYWT-DWHTKSINSANK 316 (386)
T ss_dssp CSSCSCEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ET-TEEEEE-ETTTTEEEEEET
T ss_pred ECCCCCeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEEECCCCCceEEEE-EC-CEEEEe-eCCCCeEEEEEC
Confidence 334455789999998888888765 67899999987544333333 2345678888 33 345543 567788999997
Q ss_pred CCCcEEEEEecCCCCEEEEEE
Q psy10114 757 PTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 757 ~s~k~l~sl~gH~~~VtsLaf 777 (819)
.+++....+........++++
T Consensus 317 ~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 317 FTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp TTCCSCEEEECSCSCCCCEEE
T ss_pred CCCcceEEEccCCCCCceEEE
Confidence 777777776654444555554
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.34 E-value=7.6e-05 Score=78.81 Aligned_cols=177 Identities=16% Similarity=0.221 Sum_probs=126.4
Q ss_pred CeEEEEEcCCCCEEEEEecCc--eEEEeecCCceEEEEEecCCCCe-EEEEeCCceeee-ccCCCeEEEEECCCCCccce
Q psy10114 557 SVTSVAWNERGNLVAVGTHHG--YVQVWDVSVAKQVHKLVGHTARV-GALAWNGDMLSS-GSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DG--tI~IWDl~tgk~i~tl~gHs~~V-~sLawng~~LaS-GS~DGtI~IWDi~t~~~~~v 632 (819)
-...+.|+ ++.+..+++.+| .|+++|+++++.+.++.-..... -.++..++.|.. .-.++.+.++|..+.+..
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~-- 120 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV-- 120 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE--
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE--
Confidence 35788998 676666666665 89999999999999887544332 346666665544 456899999999987643
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCC-----CCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHL-----AAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~-----~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
.++.... .=.+++ +|++.|+.+..+++|.++|..+.+.+.++.... ..++.+.|. +|. +++..- .++.
T Consensus 121 ~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w--~~~~ 193 (262)
T 3nol_A 121 RSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVW--QTNK 193 (262)
T ss_dssp EEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET--TSSE
T ss_pred EEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEc--cCCe
Confidence 3433222 212333 567777776668899999999999888876421 345567776 554 666543 6789
Q ss_pred EEEEECCCCceeEEEcCC-------------CCeEEEEEccCCCEEEEE
Q psy10114 708 IRFWNTLTGQPMQCVDTG-------------SQVCNLAWSKHSSELVST 743 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~~-------------s~V~sLafSpdg~~Last 743 (819)
|.+.|.++|+.+..++.. .-.+.++++|+++.++++
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 999999999999888542 346889999999998886
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00076 Score=73.34 Aligned_cols=242 Identities=10% Similarity=-0.023 Sum_probs=152.5
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecCceEEEeecCCceEEEEEecCCCCeEEEE
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THHGYVQVWDVSVAKQVHKLVGHTARVGALA 604 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~DGtI~IWDl~tgk~i~tl~gHs~~V~sLa 604 (819)
.+..+..+.|+..+..+.+...+. . ....+..++|++.+..|+.. ...+.|..++.+.+...............++
T Consensus 46 ~ll~~~~~~I~~i~~~g~~~~~~~--~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gla 122 (349)
T 3v64_C 46 VLLFANRIDIRQVLPHRSEYTLLL--N-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLA 122 (349)
T ss_dssp EEEEECBSCEEEECTTSCCEEEEE--C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred eeEeecccceEEEeCCCCeeEEee--c-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEE
Confidence 344455667888888776655432 2 23558899999766666555 4578899999876654443333223344555
Q ss_pred e---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE-ECC-CeEEEEECCCCceeEEEec
Q psy10114 605 W---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG-GND-NRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 605 w---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~D-GtI~IWDl~t~~~i~t~~~ 679 (819)
+ ++++.++-...+.|.+.+.+.... .......-....+++++|++..+... ..+ +.|...++...........
T Consensus 123 vd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 200 (349)
T 3v64_C 123 VDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT 200 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS
T ss_pred EecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 5 345556666778999999876432 12233344567899999966655544 444 7899998765433222223
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
.-.....++++|++..++.+-. ..+.|..+|+........+. .......+++ .. ..++.+ ....+.|..++..+
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~-~~ly~t-d~~~~~V~~~~~~~ 275 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLPHPFAITV-FE-DSLYWT-DWHTKSINSANKFT 275 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ET-TEEEEE-ETTTTEEEEEETTT
T ss_pred CCCCcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEEeCCCCCceEEEE-EC-CEEEEe-cCCCCeEEEEEccC
Confidence 3445789999998888888765 67899999987544333332 2345677888 33 455543 55678899898777
Q ss_pred CcEEEEEecCCCCEEEEEE
Q psy10114 759 LTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 759 ~k~l~sl~gH~~~VtsLaf 777 (819)
++....+........++++
T Consensus 276 G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 276 GKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp CCSCEEEECSCSCCCCEEE
T ss_pred CCccEEeccCCCCCceEEE
Confidence 7766666543333444443
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.33 E-value=1.4e-05 Score=94.30 Aligned_cols=254 Identities=11% Similarity=0.048 Sum_probs=145.4
Q ss_pred eEEEEEcCCCceEEEEeccC-CCCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceEEEEEecC--CCCeEEEEe-CCc
Q psy10114 534 CVYLWSACTSQVTRLCDLSA-DGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGH--TARVGALAW-NGD 608 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~-h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~i~tl~gH--s~~V~sLaw-ng~ 608 (819)
.+.+||..+++...+..+.. +.....++++..+|+++++|+. ++.+.+||..+++-...-..+ ...-.+... ++.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 58999999987665544432 2233446788899999999984 468999999877544322222 222344555 788
Q ss_pred eeeecc-CC-----CeEEEEECCCCCccceEEE--ecccCCeEEEEECCCCCEEEEEECCC---------eEEEEECCCC
Q psy10114 609 MLSSGS-RD-----RMILQRDVRTPNSQSERRL--VGHRQEVCGLKWSPDNQYLASGGNDN---------RLYVWNLHSM 671 (819)
Q Consensus 609 ~LaSGS-~D-----GtI~IWDi~t~~~~~v~~l--~gH~~~VtsLafSpdg~~LaSGS~DG---------tI~IWDl~t~ 671 (819)
+++.|+ .+ ..+.+||..+.....+... ......-....+..++..++.|+.|| .+..||..+.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 888888 44 5689999987653221000 00000000011234555556665544 5678888776
Q ss_pred ceeEEEecCC---------CCEEEEEEcCCCCeEEEEEccCC-C-----C---eEEEEECCCCceeEEE----cCCCCeE
Q psy10114 672 SPLQTYTEHL---------AAVKAIAWSPHHHGLLASGGGTA-D-----R---CIRFWNTLTGQPMQCV----DTGSQVC 729 (819)
Q Consensus 672 ~~i~t~~~h~---------~~VtsLafSPdg~~LLaSGgGs~-D-----g---tIrIWDl~tg~~v~~l----~~~s~V~ 729 (819)
.-........ ..-.++.+...+..+++.||... + . .+.+||..+++-.... .....-.
T Consensus 380 ~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~ 459 (656)
T 1k3i_A 380 GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH 459 (656)
T ss_dssp CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC
T ss_pred ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccC
Confidence 5333222111 12345555555566777775211 1 1 6888888877654432 1222234
Q ss_pred EEEEccCCCEEEEEEecCC-----------CeEEEEECCCCcEEE--EEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 730 NLAWSKHSSELVSTHGYSQ-----------NQILVWKYPTLTQVA--KLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 730 sLafSpdg~~LastsGssD-----------g~I~IWDl~s~k~l~--sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
+++..++++.+++ |+.+ ..+.+||..+.+-.. .+...........+.+||+.++.|+.
T Consensus 460 ~~~~l~~g~i~v~--GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 460 TSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CeEECCCCCEEEE--CCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 5566788888777 5432 568999987654321 11111222234556789999999885
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00078 Score=80.58 Aligned_cols=275 Identities=10% Similarity=-0.014 Sum_probs=170.5
Q ss_pred EEEEEecC-CeEEEEECCCeEEEEEcCCCceEEEEecc-----CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE
Q psy10114 516 LNLVDWSS-QNVLSVGLGSCVYLWSACTSQVTRLCDLS-----ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ 589 (819)
Q Consensus 516 v~~ldwS~-~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~-----~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~ 589 (819)
+.++..+. +.+..++.+ .+.++|..+++........ -....|.++...++|. |.+|+..+-|.++|..+++.
T Consensus 213 i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~ 290 (781)
T 3v9f_A 213 VRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQF 290 (781)
T ss_dssp EEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC--
T ss_pred eeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCee
Confidence 44454443 456666665 7999998887655432111 1246799999988775 56677745588899877653
Q ss_pred EEEEe--------------cCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEE-------ecccCCeEEEEE
Q psy10114 590 VHKLV--------------GHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRL-------VGHRQEVCGLKW 647 (819)
Q Consensus 590 i~tl~--------------gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l-------~gH~~~VtsLaf 647 (819)
..... -....|.++..+ ...|..|+.++-|..++............ ......|.++..
T Consensus 291 ~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 370 (781)
T 3v9f_A 291 LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD 370 (781)
T ss_dssp -------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE
T ss_pred eeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE
Confidence 32211 134578888885 44677888778888888876442211100 112356899998
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCceeEEE---ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-
Q psy10114 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTY---TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD- 723 (819)
Q Consensus 648 Spdg~~LaSGS~DGtI~IWDl~t~~~i~t~---~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~- 723 (819)
.++|+ |..|+.++-|..+|..+++..... ......|.++...+++...+.+ .++-+..+|..+++......
T Consensus 371 d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt----~~~Gl~~~~~~~~~~~~~~~~ 445 (781)
T 3v9f_A 371 DGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGT----YLGNISYYNTRLKKFQIIELE 445 (781)
T ss_dssp CTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEE----TTEEEEEECSSSCEEEECCST
T ss_pred cCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEe----ccCCEEEEcCCCCcEEEeccC
Confidence 88776 556676677899997654322111 1234679999988888744432 55678889987775433221
Q ss_pred --CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC-----CCCEEEEEEecCCCEEEEEeCCCcEEEE
Q psy10114 724 --TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH-----SYRVLYLAMSPDGEAIVTGAGDETLRFW 796 (819)
Q Consensus 724 --~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH-----~~~VtsLafSpDG~~LaSGS~DGtIrIW 796 (819)
....|.++...++|...+. .. +.+..+|..+++........ ...|.++...++|...+ |+.++-|..+
T Consensus 446 ~~~~~~v~~i~~d~~g~lwig---t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~ 520 (781)
T 3v9f_A 446 KNELLDVRVFYEDKNKKIWIG---TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIY 520 (781)
T ss_dssp TTCCCCEEEEEECTTSEEEEE---ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEE---EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEE
Confidence 2456889988888775554 23 66889998766543322222 35799999999887655 4543447778
Q ss_pred ECCCCc
Q psy10114 797 NVFSKV 802 (819)
Q Consensus 797 dl~s~~ 802 (819)
|..+++
T Consensus 521 ~~~~~~ 526 (781)
T 3v9f_A 521 TPDMQL 526 (781)
T ss_dssp CTTCCE
T ss_pred eCCCCe
Confidence 876554
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.0008 Score=73.14 Aligned_cols=238 Identities=11% Similarity=-0.022 Sum_probs=152.8
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceE
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
..+|.+..++ ..|+.+.. ..|+..++...+...... .......++|+ +.++++-...+.|..++....... .
T Consensus 35 ~~~C~~~~~~-~~ll~~~~-~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~ 109 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANR-IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--E 109 (349)
T ss_dssp SSCEEESSSC-CEEEEECB-SCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--E
T ss_pred CCcccccccC-ceeEeecc-cceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce--E
Confidence 3445555553 34444443 458888877655444443 34457889985 335556567789999998875422 2
Q ss_pred EEecccCCeEEEEECCCCCE-EEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC-CeEEEE
Q psy10114 634 RLVGHRQEVCGLKWSPDNQY-LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD-RCIRFW 711 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~-LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D-gtIrIW 711 (819)
..........++++.+.+.. +++-...+.|.+.++........+.........++++|.+..++.+.. .+ +.|...
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~--~~~~~I~r~ 187 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW--GNTPRIEAS 187 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEEC--SSSCEEEEE
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEecc--CCCCEEEEE
Confidence 22222345678999875554 455556789999998765443334344456789999998888888764 34 889999
Q ss_pred ECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC
Q psy10114 712 NTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790 (819)
Q Consensus 712 Dl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D 790 (819)
++........+. .......+++++++..|+.+ -...+.|..+|+........+........++++. ++...++-...
T Consensus 188 ~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~a-D~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 188 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV-DAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp ETTSCSCEESCCSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred eCCCCCcEEEEECCCCCcceEEEeCCCCEEEEE-ECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCC
Confidence 987543322222 23457899999988888875 4456889999987544333344445567888883 45555666677
Q ss_pred CcEEEEECCCCce
Q psy10114 791 ETLRFWNVFSKVR 803 (819)
Q Consensus 791 GtIrIWdl~s~~~ 803 (819)
+.|...+..+++.
T Consensus 266 ~~V~~~~~~~G~~ 278 (349)
T 3v64_C 266 KSINSANKFTGKN 278 (349)
T ss_dssp TEEEEEETTTCCS
T ss_pred CeEEEEEccCCCc
Confidence 8888888555543
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00064 Score=81.33 Aligned_cols=275 Identities=11% Similarity=0.001 Sum_probs=173.9
Q ss_pred eEEEEEec-CCeEEEEECCCeEEEEEcCCCceEEEEe-------c-----cCCCCCeEEEEEcCCCCEEEEEecCceEEE
Q psy10114 515 YLNLVDWS-SQNVLSVGLGSCVYLWSACTSQVTRLCD-------L-----SADGNSVTSVAWNERGNLVAVGTHHGYVQV 581 (819)
Q Consensus 515 yv~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~~~~l~~-------l-----~~h~~~VtsLafSpdG~~LAsGs~DGtI~I 581 (819)
.+.++..+ .+.+..++.++.|.++|..+++...... . .-....|.++...++|. |.+|+.++-|..
T Consensus 259 ~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~ 337 (781)
T 3v9f_A 259 YIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINF 337 (781)
T ss_dssp CEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEE
T ss_pred eEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEE
Confidence 35555555 4567777776889999998876544322 0 11246799999998885 667787777888
Q ss_pred eecCCceEEEEEe---------cCCCCeEEEEeCC-ceeeeccCCCeEEEEECCCCCccceEE-EecccCCeEEEEECCC
Q psy10114 582 WDVSVAKQVHKLV---------GHTARVGALAWNG-DMLSSGSRDRMILQRDVRTPNSQSERR-LVGHRQEVCGLKWSPD 650 (819)
Q Consensus 582 WDl~tgk~i~tl~---------gHs~~V~sLawng-~~LaSGS~DGtI~IWDi~t~~~~~v~~-l~gH~~~VtsLafSpd 650 (819)
++..++....... .....|.++..+. ..|..|+.++-+..+|..+........ .......|.++...++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~ 417 (781)
T 3v9f_A 338 ISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE 417 (781)
T ss_dssp ECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTT
T ss_pred eCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC
Confidence 9877654322110 1235688998853 567778877778888876532211100 0123467899998887
Q ss_pred CCEEEEEECCCeEEEEECCCCceeEEEe---cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---
Q psy10114 651 NQYLASGGNDNRLYVWNLHSMSPLQTYT---EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT--- 724 (819)
Q Consensus 651 g~~LaSGS~DGtI~IWDl~t~~~i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~--- 724 (819)
|+. ..|+.++-|..+|.++++. ..+. .....|.++...+++...+.+ . +-+..+|..+++.......
T Consensus 418 g~l-Wigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwigt----~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 418 GNL-WFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWIGT----H-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp SCE-EEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEEEE----T-TEEEEEESSSSSCCEEECTTTS
T ss_pred CCE-EEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEEEE----C-CceEEEeCCCCeEEecccCccc
Confidence 764 4477777899999877653 2332 134679999988887644432 3 5688899887765443321
Q ss_pred ---CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec----CCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 725 ---GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG----HSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 725 ---~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g----H~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
...|.++...++|+..+. ...+.+..+|..+++ ...+.. ....|.++...++|...+ |+.+|.|..||
T Consensus 491 ~~~~~~i~~i~~d~~g~lWig---t~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d 565 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWIG---TFGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEGLVCFPS 565 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEEE---ESSSCEEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEE-EETTEEEEESC
T ss_pred ccccceeEEEEEcCCCCEEEE---EcCCCEEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEE-EECCCceEEEC
Confidence 356899999988887665 333457778876553 333431 135689999988887655 44566558888
Q ss_pred CCCCc
Q psy10114 798 VFSKV 802 (819)
Q Consensus 798 l~s~~ 802 (819)
..+++
T Consensus 566 ~~~~~ 570 (781)
T 3v9f_A 566 ARNFD 570 (781)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 76654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.26 E-value=0.0025 Score=70.62 Aligned_cols=242 Identities=11% Similarity=0.001 Sum_probs=156.8
Q ss_pred EEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCc----eEEEEEecCCCCeE
Q psy10114 527 LSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVA----KQVHKLVGHTARVG 601 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tg----k~i~tl~gHs~~V~ 601 (819)
+..+....|+..++.+.+...+. .....+..++|++.+..|+.+. .++.|..+++... .....+........
T Consensus 86 ll~~~~~~I~~i~l~~~~~~~~~---~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEETTEEEEECTTSCSCEEEE---CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eEEeccceeEEEccCCcceeEec---cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 34445678888888877665442 2346789999998766666554 5688988888652 22333333344556
Q ss_pred EEEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC--CCeEEEEECCCCceeEE
Q psy10114 602 ALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN--DNRLYVWNLHSMSPLQT 676 (819)
Q Consensus 602 sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~--DGtI~IWDl~t~~~i~t 676 (819)
.+++ .+++.++-...+.|.+.+++.... ...+........+++++|.+..|+.... .+.|...++........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 6666 355666666788999999876442 2223334456889999997666655542 36899999865444333
Q ss_pred EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEE
Q psy10114 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILV 753 (819)
Q Consensus 677 ~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~I 753 (819)
....-.....|++++++..++.+-. ..+.|..+|+........... -.....++. ++..++.+ ....+.|..
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywt-d~~~~~V~~ 315 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWT-DIINEAIFS 315 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEE-ESSSCSEEE
T ss_pred EECCCCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEe-cCCCCeEEE
Confidence 3444466789999999888888764 678999999876544333332 234566776 44455554 456788999
Q ss_pred EECCCCcEEEEEecCCCCEEEEEEe
Q psy10114 754 WKYPTLTQVAKLTGHSYRVLYLAMS 778 (819)
Q Consensus 754 WDl~s~k~l~sl~gH~~~VtsLafS 778 (819)
+|..+++.+..+........++++.
T Consensus 316 ~~~~~G~~~~~i~~~~~~p~~i~v~ 340 (400)
T 3p5b_L 316 ANRLTGSDVNLLAENLLSPEDMVLF 340 (400)
T ss_dssp EESSSCCCCEEEECSCSCEEEEEEE
T ss_pred EEcCCCCceEEEecCCCCCceEEEE
Confidence 9988888777776555556666543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.26 E-value=0.00022 Score=75.45 Aligned_cols=189 Identities=12% Similarity=0.094 Sum_probs=129.0
Q ss_pred eEEEEEecCCC--CeEEEEeCCc-eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 588 KQVHKLVGHTA--RVGALAWNGD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 588 k~i~tl~gHs~--~V~sLawng~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
+.++++ .|.. -...+.|+++ ...+.+.+|.|+.+|+++++..... +.. ..--.+++... ++..+..-.++.+.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC-CEEEEEEccCCEEE
Confidence 344555 3433 3468888655 5567778889999999998754323 222 11223455543 34445555688999
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC------CCeEEEEEccCCC
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG------SQVCNLAWSKHSS 738 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~------s~V~sLafSpdg~ 738 (819)
++|.++.+.+.++...... ..+ +++++.++++. .++.|.++|..+.+.+..+... ..++.+.|. +|+
T Consensus 120 V~D~~Tl~~~~ti~~~~eG-wGL--t~Dg~~L~vSd---Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEG-WGL--CYWNGKLVRSD---GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEETTTTEEEEEEECSSCC-CCE--EEETTEEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCcCcEEEEEeCCCce-eEE--ecCCCEEEEEC---CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 9999999999998753322 233 36678788775 3789999999999988887542 245677776 664
Q ss_pred EEEEEEecCCCeEEEEECCCCcEEEEEecC-------------CCCEEEEEEecCCCEEEEEeC
Q psy10114 739 ELVSTHGYSQNQILVWKYPTLTQVAKLTGH-------------SYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s~k~l~sl~gH-------------~~~VtsLafSpDG~~LaSGS~ 789 (819)
+++. ...++.|.+.|..+++.+..+.-. ....+++|++|+++.|...+.
T Consensus 193 -lyan-vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 193 -IYAN-IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp -EEEE-ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred -EEEE-ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 5543 456889999999999999887632 135689999998766655443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.0008 Score=74.18 Aligned_cols=236 Identities=12% Similarity=-0.012 Sum_probs=152.8
Q ss_pred EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEE
Q psy10114 559 TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 559 tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l 635 (819)
+|.+..+ ...|+.+.. ..|+..++...+...... .......++|+ +.++++-...+.|..++....... ...
T Consensus 80 ~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~ 154 (386)
T 3v65_B 80 SCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVV 154 (386)
T ss_dssp CEEECSS-CCEEEEECB-SCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE--EEE
T ss_pred eECCccc-cceeEeecC-ccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE--EEE
Confidence 3444444 334444443 568888887665444443 34457789985 335556567789999998765421 222
Q ss_pred ecccCCeEEEEECCCCCEE-EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC-CeEEEEEC
Q psy10114 636 VGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD-RCIRFWNT 713 (819)
Q Consensus 636 ~gH~~~VtsLafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D-gtIrIWDl 713 (819)
........++++.+.+..| ++-...+.|.+.++........+.........++++|.+..++.+.. .+ +.|...++
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~--~~~~~I~r~~~ 232 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW--GNTPRIEASSM 232 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEEC--SSSCEEEEEET
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEecc--CCCCEEEEEeC
Confidence 2223455788888755544 55556778999988755444444444466789999998888888764 34 78999998
Q ss_pred CCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCc
Q psy10114 714 LTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDET 792 (819)
Q Consensus 714 ~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGt 792 (819)
........... -.....+++++++..|+.+ -...+.|..+|+........+........++++. ++..+++....+.
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~ 310 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWV-DAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKS 310 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEE-ETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTE
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEE-ECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCe
Confidence 75544333332 3457899999988888875 4466889999987544433344445567888883 4556666667788
Q ss_pred EEEEECCCCce
Q psy10114 793 LRFWNVFSKVR 803 (819)
Q Consensus 793 IrIWdl~s~~~ 803 (819)
|..++..+++.
T Consensus 311 V~~~~~~~G~~ 321 (386)
T 3v65_B 311 INSANKFTGKN 321 (386)
T ss_dssp EEEEETTTCCS
T ss_pred EEEEECCCCcc
Confidence 98888655543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=0.0014 Score=69.43 Aligned_cols=226 Identities=10% Similarity=0.031 Sum_probs=133.7
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccC-----------------CCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSA-----------------DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~-----------------h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
+.+.++..++.|..|+..+++......... ....+.++++.+++..|+++...+.|..+|..+
T Consensus 31 ~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~ 110 (322)
T 2fp8_A 31 KGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEG 110 (322)
T ss_dssp SSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTC
T ss_pred CEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCC
Confidence 337777778999999988776654322110 013578999997333555665555588888775
Q ss_pred ceEEEEEec-----CCCCeEEEEeCC---ceeeecc-----------------CCCeEEEEECCCCCccceEEEecccCC
Q psy10114 587 AKQVHKLVG-----HTARVGALAWNG---DMLSSGS-----------------RDRMILQRDVRTPNSQSERRLVGHRQE 641 (819)
Q Consensus 587 gk~i~tl~g-----Hs~~V~sLawng---~~LaSGS-----------------~DGtI~IWDi~t~~~~~v~~l~gH~~~ 641 (819)
++. ..+.. .......+++++ +..++-. .++.|..+|..+++. ..+......
T Consensus 111 g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~---~~~~~~~~~ 186 (322)
T 2fp8_A 111 GHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET---TLLLKELHV 186 (322)
T ss_dssp EEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE---EEEEEEESC
T ss_pred CEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE---EEeccCCcc
Confidence 542 22221 113456777754 3333321 247788888765442 222222234
Q ss_pred eEEEEECCCCCEEEEE-ECCCeEEEEECCCCc--eeEEEecCCCCEEEEEEcCCCCeEEEEEcc-------CCCCeEEEE
Q psy10114 642 VCGLKWSPDNQYLASG-GNDNRLYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHHHGLLASGGG-------TADRCIRFW 711 (819)
Q Consensus 642 VtsLafSpdg~~LaSG-S~DGtI~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg~~LLaSGgG-------s~DgtIrIW 711 (819)
..+++++++++.+..+ +.++.|.++|+.... ....+....+ ...++++++|...++..+. ...+.|..+
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~ 265 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKF 265 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEE
Confidence 5689999999866555 556899999987532 1222222233 7889999999854444310 014678888
Q ss_pred ECCCCceeEEEcCC-----CCeEEEEEccCCCEEEEEEecCCCeEEEEECCC
Q psy10114 712 NTLTGQPMQCVDTG-----SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT 758 (819)
Q Consensus 712 Dl~tg~~v~~l~~~-----s~V~sLafSpdg~~LastsGssDg~I~IWDl~s 758 (819)
|. .++.+..+... ..++++++ .++ .|+++ ....+.|..+++..
T Consensus 266 d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g-~L~v~-~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 266 DE-FGNILEVIPLPPPFAGEHFEQIQE-HDG-LLYIG-TLFHGSVGILVYDK 313 (322)
T ss_dssp CT-TSCEEEEEECCTTTTTSCCCEEEE-ETT-EEEEE-CSSCSEEEEEEC--
T ss_pred CC-CCCEEEEEECCCCCccccceEEEE-eCC-EEEEe-ecCCCceEEEeccc
Confidence 86 47766666432 34666666 344 45543 45678888888753
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.00051 Score=71.79 Aligned_cols=179 Identities=13% Similarity=0.134 Sum_probs=125.1
Q ss_pred CCCeEEEEEcCCCCEEEEEecC--ceEEEeecCCceEEEEEecCCCCe-EEEEeCCc-eeeeccCCCeEEEEECCCCCcc
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHH--GYVQVWDVSVAKQVHKLVGHTARV-GALAWNGD-MLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~D--GtI~IWDl~tgk~i~tl~gHs~~V-~sLawng~-~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
..-...+.|+. +.+..+.+.+ +.|+.+|+++++.+++..-..... -.++..++ .....-.++.+.++|..+.+..
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 34567899986 5555555554 489999999999999887443322 34566555 4445567899999999886633
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCC-----CCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHL-----AAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~-----~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.++... ..-.+++ +|++.|+.+..++.|.++|.++.+.+.++.-.. ..++.+.+. +|+ +++..- .+
T Consensus 99 --~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw--~s 169 (243)
T 3mbr_X 99 --ARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVW--LT 169 (243)
T ss_dssp --EEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET--TT
T ss_pred --EEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEEC--CC
Confidence 344322 2223444 467777776778899999999999888876422 345666765 454 555543 57
Q ss_pred CeEEEEECCCCceeEEEcCC--------------CCeEEEEEccCCCEEEEE
Q psy10114 706 RCIRFWNTLTGQPMQCVDTG--------------SQVCNLAWSKHSSELVST 743 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l~~~--------------s~V~sLafSpdg~~Last 743 (819)
..|.+.|.++|+.+..++.. .-.+.++++|+++.++++
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 79999999999998887522 246889999999988886
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0041 Score=68.89 Aligned_cols=231 Identities=13% Similarity=0.001 Sum_probs=149.3
Q ss_pred EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCC--ccceEEEecccCCeE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPN--SQSERRLVGHRQEVC 643 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~--~~~v~~l~gH~~~Vt 643 (819)
+|+.+. ...|+..|++......... ....+..++|+ +.+.++-...+.|..+++.... ...............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444444 3678888887665444433 45667889995 3355555667889888887532 111222333445678
Q ss_pred EEEECCC-CCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 644 GLKWSPD-NQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 644 sLafSpd-g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
++++.+. ++.+++-...+.|.+.|+........+.........|+++|.+..++.+..| ..+.|...++........+
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCccEEEE
Confidence 9999884 4455555567899999987665544454455567999999988878877532 3478999998755443333
Q ss_pred cC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 723 DT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 723 ~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
.. -.....+++++++..|+.+ -...+.|..+|+........... ......++++. .+..+++-...+.|..+|..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEE-ECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC
Confidence 33 3568999999998888885 34578899999865443333332 23456778874 34455566677889999876
Q ss_pred CCcee
Q psy10114 800 SKVRS 804 (819)
Q Consensus 800 s~~~~ 804 (819)
+++..
T Consensus 320 ~G~~~ 324 (400)
T 3p5b_L 320 TGSDV 324 (400)
T ss_dssp SCCCC
T ss_pred CCCce
Confidence 66543
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.11 E-value=0.006 Score=65.06 Aligned_cols=229 Identities=13% Similarity=0.011 Sum_probs=145.2
Q ss_pred EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--C-ceeeeccCCCeEEEEECCCCC--ccceEEEecccCCeE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--G-DMLSSGSRDRMILQRDVRTPN--SQSERRLVGHRQEVC 643 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g-~~LaSGS~DGtI~IWDi~t~~--~~~v~~l~gH~~~Vt 643 (819)
+|+.+.. ..|+..|+++.+....+. ......+++|+ + ..+++-..++.|..++..... ......+........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444444 458888988776555444 34567788984 3 355566667899999987621 011122222234567
Q ss_pred EEEECCCCCEE-EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 644 GLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 644 sLafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
++++++.++.| ++-...+.|.+.|.........+.........++++|.+..++.+..+ ..+.|...++.... ...+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG~~-~~~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCC-EEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCCCC-eEEE
Confidence 89998755544 555667899999987554433334344567899999988878777642 23789888886433 3333
Q ss_pred -c-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 723 -D-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 723 -~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
. .-.....++++++++.++.+ -...+.|..+|+........... ......++++. ++...++-...+.|..++.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~-D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred EECCCCCceEEEEeccCCEEEEE-ECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 2 33567899999998888875 44567999999874332222222 23456788885 4555666667788999998
Q ss_pred CCCce
Q psy10114 799 FSKVR 803 (819)
Q Consensus 799 ~s~~~ 803 (819)
.+++.
T Consensus 237 ~~g~~ 241 (316)
T 1ijq_A 237 LTGSD 241 (316)
T ss_dssp TTCCC
T ss_pred CCCcc
Confidence 66653
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00019 Score=86.14 Aligned_cols=241 Identities=12% Similarity=0.041 Sum_probs=133.4
Q ss_pred CeEEEEEc-CCCCEEEEEec-Cc----eEEEeecCCc-eEEE-EEecCCCCeEEEEe--CCceeeeccCC-----CeEEE
Q psy10114 557 SVTSVAWN-ERGNLVAVGTH-HG----YVQVWDVSVA-KQVH-KLVGHTARVGALAW--NGDMLSSGSRD-----RMILQ 621 (819)
Q Consensus 557 ~VtsLafS-pdG~~LAsGs~-DG----tI~IWDl~tg-k~i~-tl~gHs~~V~sLaw--ng~~LaSGS~D-----GtI~I 621 (819)
.+.+.+|| |||++||.+.. +| .|+++|++++ +.+. .+.. ...+++| +++.|+....| ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998886644 23 5999999988 6321 1111 1235778 45566655544 36888
Q ss_pred EECCCCCccceEEEe-cccCCeEEEEECCCCCEEEEEEC---CCeEEEEECCCCc-ee--EEEe-cCCCCEEEEEEcCCC
Q psy10114 622 RDVRTPNSQSERRLV-GHRQEVCGLKWSPDNQYLASGGN---DNRLYVWNLHSMS-PL--QTYT-EHLAAVKAIAWSPHH 693 (819)
Q Consensus 622 WDi~t~~~~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~---DGtI~IWDl~t~~-~i--~t~~-~h~~~VtsLafSPdg 693 (819)
+++.++.......+. .......++.|+|||++|+..+. ...|.++|+.++. .. ..+. ...+...++.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 888775432222222 22334678899999999887663 3468899998753 22 3333 3344555555543 5
Q ss_pred CeEEEEEcc--CCCCeEEEEECCCC-ceeE-EEcCCCCeEEEEEccCCCEEEEEEecCCCe--EEEEEC-------CCCc
Q psy10114 694 HGLLASGGG--TADRCIRFWNTLTG-QPMQ-CVDTGSQVCNLAWSKHSSELVSTHGYSQNQ--ILVWKY-------PTLT 760 (819)
Q Consensus 694 ~~LLaSGgG--s~DgtIrIWDl~tg-~~v~-~l~~~s~V~sLafSpdg~~LastsGssDg~--I~IWDl-------~s~k 760 (819)
..++..+.. .....|..+|+.++ +... .+.+...+.--.++..++.++.. ...++. |.++++ .+++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~-~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVA-GRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEE-EEETTEEEEEEEECCTTTSCCCTTT
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEE-EEeCCEEEEEEEecccccccccCCc
Confidence 556555431 12347778887753 3222 34443332222344456666654 445564 566665 3333
Q ss_pred EEEEEecC-CCCEEEEEE----ecCCC-EEEEEeCC---CcEEEEECCCCc
Q psy10114 761 QVAKLTGH-SYRVLYLAM----SPDGE-AIVTGAGD---ETLRFWNVFSKV 802 (819)
Q Consensus 761 ~l~sl~gH-~~~VtsLaf----SpDG~-~LaSGS~D---GtIrIWdl~s~~ 802 (819)
....+.-. ...+..+.+ ++++. ++++.+.. +.+..+|+.+++
T Consensus 410 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 410 GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 13333211 122333432 34554 44444432 457777776654
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.06 E-value=0.003 Score=67.96 Aligned_cols=229 Identities=14% Similarity=0.042 Sum_probs=146.1
Q ss_pred EEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVC 643 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~Vt 643 (819)
+|+.+. ...|+..|++... ....+. ......+++|+ +....+-...+.|..++....... .......-....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCCcc
Confidence 344433 3578888887653 222222 22345678884 445666667789999998765321 122222334567
Q ss_pred EEEECCCCC-EEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 644 GLKWSPDNQ-YLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 644 sLafSpdg~-~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
++++.+.+. .+++-...+.|.+.++..................++++|.+..++.+..+ ..+.|...++.........
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEEE
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEEE
Confidence 899987544 44555567899999987544333333445667899999987777777521 3578999988654333323
Q ss_pred cC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 723 DT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 723 ~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.. -.....+++++++..++.+ -...+.|..+|+..........+......++++.. +..+++-...+.|..++..++
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWA-DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCccEEEEeccCCEEEEE-ECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 22 3457899999988888875 45678999999874333323333455678888863 345556667788999998766
Q ss_pred ce
Q psy10114 802 VR 803 (819)
Q Consensus 802 ~~ 803 (819)
+.
T Consensus 240 ~~ 241 (318)
T 3sov_A 240 EG 241 (318)
T ss_dssp CS
T ss_pred Cc
Confidence 54
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0015 Score=73.14 Aligned_cols=235 Identities=9% Similarity=0.039 Sum_probs=141.7
Q ss_pred CCeEEEEEcC-CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--CceeeeccC-CC----eEEEEECCCC
Q psy10114 556 NSVTSVAWNE-RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDMLSSGSR-DR----MILQRDVRTP 627 (819)
Q Consensus 556 ~~VtsLafSp-dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~LaSGS~-DG----tI~IWDi~t~ 627 (819)
.....++++| ++..|+++...+.|+.+|.+.++... +.........++++ ++.|+++.. ++ .+...+...
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g- 214 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES- 214 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-
Confidence 3567899998 46667777666889999988766443 33345567889984 664554443 22 344444332
Q ss_pred CccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEEEec-CCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTE-HLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.......+. ......+++++| +|..+++-..++.|..+|...+........ ....-..++|+|+++.++++.. ..
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~--~~ 291 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV--NQ 291 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET--TT
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC--CC
Confidence 221112222 234467788999 677666666778999999987654222222 2234678999999997777754 67
Q ss_pred CeEEEEECCC--Cce--eEEE-cC-C--------------CCeE-EEEEc--------cCCCEEEEEEecCCCeEEEEEC
Q psy10114 706 RCIRFWNTLT--GQP--MQCV-DT-G--------------SQVC-NLAWS--------KHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 706 gtIrIWDl~t--g~~--v~~l-~~-~--------------s~V~-sLafS--------pdg~~LastsGssDg~I~IWDl 756 (819)
+.|..++... ++. ...+ .. + .... .++.. ++|...++ -...+.|+.++
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva--D~~n~~I~~i~- 368 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC--DRENHCIRILT- 368 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE--EGGGTEEEEEC-
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE--ECCCcEEEEEC-
Confidence 8999987653 221 1111 11 0 1123 45543 23444444 45677899888
Q ss_pred CCCcEEEEEecC---------C---------CCEEEEEEecC-CCEEEEEeCCCcEEEEECC
Q psy10114 757 PTLTQVAKLTGH---------S---------YRVLYLAMSPD-GEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 757 ~s~k~l~sl~gH---------~---------~~VtsLafSpD-G~~LaSGS~DGtIrIWdl~ 799 (819)
++++. ..+.+. . .....++++++ |.++++-.....|+..+++
T Consensus 369 ~~G~v-~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 369 PQGRV-TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTSEE-EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcE-EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 45543 333322 1 25789999994 6666665567788887754
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.04 E-value=0.0082 Score=64.31 Aligned_cols=266 Identities=8% Similarity=0.003 Sum_probs=145.6
Q ss_pred eEEEEEec-CCeEEEEECCCeEEEEEcCCCc-eEEEEe-ccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 515 YLNLVDWS-SQNVLSVGLGSCVYLWSACTSQ-VTRLCD-LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 515 yv~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~-~~~l~~-l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
.+..+.+. ++.+++++..+.|. .....++ ...+.. .......+.++.+++ +..++ ++.+|.|.. ..+.|+.-.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~ 112 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWS 112 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCE
T ss_pred cEEEEEECCCCcEEEEcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCce
Confidence 45666665 45566678888763 3333332 232211 112245789999986 44444 455665543 223343322
Q ss_pred EEe---cCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 592 KLV---GHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~---gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
... .+.+.+..+.+ +++.++.++.+|.|.. ..+.++ ............+.++.+.+++..++++...+..+-.|
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~-tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGK-NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTS-SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCC-CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 222 23455677776 3333444444565432 222222 22233344556789999999988777664433333344
Q ss_pred C--CCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-----CCCeEEEEEccCCCEE
Q psy10114 668 L--HSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-----GSQVCNLAWSKHSSEL 740 (819)
Q Consensus 668 l--~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-----~s~V~sLafSpdg~~L 740 (819)
- .+.+.+. ......+..+++.+++..+ +.+ .+|.+++.+...|+.-..+.. ...+..+++.+++..+
T Consensus 191 ~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~---~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 191 PGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIV---NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp TTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEE---TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred CCCCceeECC--CCCCCccceeEECCCCCEE-EEe---CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 2 2223321 2345678899999988744 443 578887765333443332321 2358889998887766
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEEec---CCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKLTG---HSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl~g---H~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
++ + .++.+ .+....++.-..+.. ....+.++.|.+++ .++.++.+|.|.-++
T Consensus 265 ~~--g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 265 LA--G-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp EE--E-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred EE--e-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 65 4 35666 344444444333331 23567888887655 466677889776654
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.03 E-value=0.0026 Score=68.43 Aligned_cols=241 Identities=10% Similarity=0.029 Sum_probs=148.8
Q ss_pred EEEECCCeEEEEEcCCCc--eEEEEeccCCCCCeEEEEEcCCCCEEE-EEecCceEEEeecCCceE-EEEEecCCCCeEE
Q psy10114 527 LSVGLGSCVYLWSACTSQ--VTRLCDLSADGNSVTSVAWNERGNLVA-VGTHHGYVQVWDVSVAKQ-VHKLVGHTARVGA 602 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~--~~~l~~l~~h~~~VtsLafSpdG~~LA-sGs~DGtI~IWDl~tgk~-i~tl~gHs~~V~s 602 (819)
+..+....|+..++.+.. ...+ +. ....+.+++|++.+..|+ +-..++.|..++.+.+.. ...+...-.....
T Consensus 7 ll~~~~~~I~~i~l~~~~~~~~~~--~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 7 LLYANRRDLRLVDATNGKENATIV--VG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEECEEEEEEEETTCTTSCCEEE--EE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEccCeEEEEECCCCceEEEEE--ec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 334556778888887653 2211 11 123567899998655554 445678899999876532 1122222223344
Q ss_pred EEe---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE--CCCeEEEEECCCCceeEEE
Q psy10114 603 LAW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG--NDNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 603 Law---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS--~DGtI~IWDl~t~~~i~t~ 677 (819)
+++ +++..++-...+.|.+.+.+..... ...........++++.|.+..++.+. ..+.|...++.........
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEE--EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 555 3455666667789999998764321 22224445678999998766666555 3578998887643332222
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
...-..-..+++++++..++.+-. ..+.|..+|+.......... .......+++. +..++.+ ....+.|..++.
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywt-d~~~~~V~~~~~ 236 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWT-DWSTHSILACNK 236 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEE-ETTTTEEEEEET
T ss_pred ECCCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEE-ecCCCeEEEEEC
Confidence 333455689999998888888765 67899999987543332232 33456777774 3455554 556789999998
Q ss_pred CCCcEEEEEecCCCCEEEEEE
Q psy10114 757 PTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 757 ~s~k~l~sl~gH~~~VtsLaf 777 (819)
.+++....+........++++
T Consensus 237 ~~G~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 237 YTGEGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp TTCCSCEEEECCCSSCCCEEE
T ss_pred CCCCceEEEeCCCCCCcEEEE
Confidence 888776666543333444443
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.99 E-value=0.0051 Score=64.56 Aligned_cols=200 Identities=12% Similarity=0.183 Sum_probs=133.1
Q ss_pred eccCCCCCeEEEEEcCCCCEE-EEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEeC--CceeeeccCCCeEEEEECC
Q psy10114 550 DLSADGNSVTSVAWNERGNLV-AVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWN--GDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~L-AsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~ 625 (819)
.+.+-.+.+..++|+|+++.| ++...++.|...|.. ++.++.+. +-....-.+++. +.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 455656789999999977655 557788999999988 88888775 223567788883 4455565567889998886
Q ss_pred CCCc-cceEEEe------cccCCeEEEEECCCCCEEEEEECCCeEEEEECC---CCceeEEEe-------cCCCCEEEEE
Q psy10114 626 TPNS-QSERRLV------GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH---SMSPLQTYT-------EHLAAVKAIA 688 (819)
Q Consensus 626 t~~~-~~v~~l~------gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~---t~~~i~t~~-------~h~~~VtsLa 688 (819)
.... ....... ..+....+++|+|+++.|.++.+.....+|..+ ....+.... .+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 6442 1111111 234457899999999877777665544444443 111222221 1234578999
Q ss_pred EcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC----------CCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 689 WSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG----------SQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 689 fSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~----------s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
++|....+++.+. ..+.+..+|.. |+.+..+.-. .+...|+|.++|+..++ ++.+.+..+.-
T Consensus 180 ~dp~tg~lliLS~--~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv---sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSH--ESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV---SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEET--TTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE---ETTTEEEEEEC
T ss_pred EcCCCCeEEEEEC--CCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE---cCCceEEEEEe
Confidence 9999888888876 78999999965 5566555322 37799999999985444 35566666653
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.96 E-value=0.0034 Score=70.51 Aligned_cols=235 Identities=9% Similarity=0.000 Sum_probs=143.7
Q ss_pred CCeEEEEEcCC--CCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCC---C-eEEEEECCCC
Q psy10114 556 NSVTSVAWNER--GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRD---R-MILQRDVRTP 627 (819)
Q Consensus 556 ~~VtsLafSpd--G~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~D---G-tI~IWDi~t~ 627 (819)
.....++|+++ +..|+++...+.|+.+|.++++... +.........+++ +++++++.... . .+...+....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 34678999984 4556666555889999988776544 4444556788888 45644443311 1 2333333221
Q ss_pred CccceEEEecccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCceeEEE-ec-CCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNRLYVWNLHSMSPLQTY-TE-HLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGtI~IWDl~t~~~i~t~-~~-h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
. .....+. ......++++++ +|..+++-..++.|+.+|..++.....+ .. ....-..++|+|+++.++++.. .
T Consensus 218 ~-~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~--~ 293 (433)
T 4hw6_A 218 F-TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN--G 293 (433)
T ss_dssp T-CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET--T
T ss_pred e-ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC--C
Confidence 1 1111121 234456788999 6766666667788999999877652222 21 1222346999999997877754 6
Q ss_pred CCeEEEEECC--CCce--eEEE-cC---------------CCCeEEEEE---------ccCCCEEEEEEecCCCeEEEEE
Q psy10114 705 DRCIRFWNTL--TGQP--MQCV-DT---------------GSQVCNLAW---------SKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 705 DgtIrIWDl~--tg~~--v~~l-~~---------------~s~V~sLaf---------Spdg~~LastsGssDg~I~IWD 755 (819)
.+.|+.+|.. ++.. ...+ .. -.....+++ .++|+..++ -...+.|+.++
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva--D~~n~~I~~~~ 371 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC--DRDSHTVRVLT 371 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE--ETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEE--ECCCCEEEEEC
Confidence 7899998865 3321 1111 11 123567898 666665555 56678899998
Q ss_pred CCCCcEEEEEecC------------------CCCEEEEEEe-cCCCEEEEEeCCCcEEEEECC
Q psy10114 756 YPTLTQVAKLTGH------------------SYRVLYLAMS-PDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 756 l~s~k~l~sl~gH------------------~~~VtsLafS-pDG~~LaSGS~DGtIrIWdl~ 799 (819)
. ++ .+.++.+. -.....++++ ++|.++++-.....|+..+++
T Consensus 372 ~-~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 P-EG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp T-TS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4 55 34444332 1237889999 677766666667888888764
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.012 Score=71.26 Aligned_cols=232 Identities=12% Similarity=0.000 Sum_probs=147.7
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecCceEEEeecCCc----eEEEEEecCCCCe
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVA----KQVHKLVGHTARV 600 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tg----k~i~tl~gHs~~V 600 (819)
++..+....|+..++...+...+.. ....+..++|++.+..|+. -...+.|+.+++... .....+.......
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~---~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccccccccceeEeeccCCcceeeec---CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 4445566778888887766554332 3467889999986555554 445678888888653 2233333233344
Q ss_pred EEEEe--CC-ceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC--CCeEEEEECCCCceeE
Q psy10114 601 GALAW--NG-DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN--DNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 601 ~sLaw--ng-~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~--DGtI~IWDl~t~~~i~ 675 (819)
..|++ .+ ++.++-...+.|.+.++..... ...+........+|+++|.+..|+.... .+.|...++.......
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~--~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeE--EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 45665 34 5666767788999999876442 1222334456889999997666655542 3689999986554444
Q ss_pred EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 676 TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 676 t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
.+...-.....|++++.+..|+.+-. ..+.|...|+........+... .....|++ .+..|+.+ -...+.|.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwt-D~~~~~I~ 626 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWT-DIINEAIF 626 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEE-ETTTTEEE
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeC--CCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEE-ECCCCEEE
Confidence 44444467889999988888888764 6789999998765544444321 23456665 44566664 45678888
Q ss_pred EEECCCCcEEEEEec
Q psy10114 753 VWKYPTLTQVAKLTG 767 (819)
Q Consensus 753 IWDl~s~k~l~sl~g 767 (819)
..|..+++.+..+..
T Consensus 627 ~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 627 SANRLTGSDVNLLAE 641 (791)
T ss_dssp EEETTTCCCCEEEEC
T ss_pred EEeCCCCcceEEeec
Confidence 888777766665543
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00031 Score=82.73 Aligned_cols=263 Identities=14% Similarity=0.070 Sum_probs=145.2
Q ss_pred EEEEEcCCCceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCc-----------eEEEeecCCceE--EEEEec-CCCC
Q psy10114 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHG-----------YVQVWDVSVAKQ--VHKLVG-HTAR 599 (819)
Q Consensus 535 V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DG-----------tI~IWDl~tgk~--i~tl~g-Hs~~ 599 (819)
+..+|..+++...+..+.. . -.++++.+ +|+.++.|+.++ .+.+||..+++- +..+.. +...
T Consensus 168 ~~~~dp~~~~W~~~~~~P~--~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~ 244 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI--V-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF 244 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS--C-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS
T ss_pred cccCCCCCCeeeeeccCCC--C-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc
Confidence 3344555666665555543 1 23556677 888888887543 688999987752 333322 2333
Q ss_pred eEEEEe--CCceeeecc-CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CC-----CeEEEEECCC
Q psy10114 600 VGALAW--NGDMLSSGS-RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-ND-----NRLYVWNLHS 670 (819)
Q Consensus 600 V~sLaw--ng~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~D-----GtI~IWDl~t 670 (819)
..++++ ++..++.|+ .++.+.+||..+.+......+..... -.+++..++++.++.|+ .+ +.+.+||..+
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 333443 788888888 45689999998765433222222111 23455667899999998 44 4699999987
Q ss_pred CceeEEE----ecCCCCEEEEEEcCCCCeEEEEEcc-------CCCCeEEEEECCCCceeEEEcC----------CCCeE
Q psy10114 671 MSPLQTY----TEHLAAVKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDT----------GSQVC 729 (819)
Q Consensus 671 ~~~i~t~----~~h~~~VtsLafSPdg~~LLaSGgG-------s~DgtIrIWDl~tg~~v~~l~~----------~s~V~ 729 (819)
.+-...- ......-....+..++. +++.|+. .....+..||..++........ ...-.
T Consensus 324 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 324 KTWTSLPNAKVNPMLTADKQGLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TEEEEETTSCSGGGCCCCTTGGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CcceeCCCccccccccccccceeecCCc-eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 6422110 00000000011122333 3333320 0235678899887764433211 11234
Q ss_pred EEEEccCCCEEEEEEecCC--------C---eEEEEECCCCcEEEEE--ecCCCCE-EEEEEecCCCEEEEEeCC-----
Q psy10114 730 NLAWSKHSSELVSTHGYSQ--------N---QILVWKYPTLTQVAKL--TGHSYRV-LYLAMSPDGEAIVTGAGD----- 790 (819)
Q Consensus 730 sLafSpdg~~LastsGssD--------g---~I~IWDl~s~k~l~sl--~gH~~~V-tsLafSpDG~~LaSGS~D----- 790 (819)
++.+...+..+++. |+.+ . .+.+||..+.+-.... .....+. .+++..++|+.++.|+.+
T Consensus 403 av~~~~~~~~i~v~-GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 403 AVMYDAVKGKILTF-GGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEETTTTEEEEE-CCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred eEeccCCCCeEEEE-eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 45555444455554 4322 1 6778887766544332 2223333 344667899999998854
Q ss_pred ------CcEEEEECCCCce
Q psy10114 791 ------ETLRFWNVFSKVR 803 (819)
Q Consensus 791 ------GtIrIWdl~s~~~ 803 (819)
..+.+||..+.+-
T Consensus 482 ~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEE
T ss_pred CCCCcccceEEEcCCCCce
Confidence 4689999877654
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=0.031 Score=65.80 Aligned_cols=232 Identities=9% Similarity=-0.034 Sum_probs=149.5
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE-ecCceEEEeecCCceEEEEEecCCCCeEEEE
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG-THHGYVQVWDVSVAKQVHKLVGHTARVGALA 604 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG-s~DGtI~IWDl~tgk~i~tl~gHs~~V~sLa 604 (819)
++..+..+.|+..++.+.+......+.+ -..+..++|++++..|+.+ ..++.|..++++.......+.........++
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTG-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 3444577889999988766544333322 3568899999976666555 4578899998875543333332223344555
Q ss_pred e--C-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE--CCCeEEEEECCCCceeEEEec
Q psy10114 605 W--N-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG--NDNRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 605 w--n-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS--~DGtI~IWDl~t~~~i~t~~~ 679 (819)
+ . ++..++-...+.|.+.+++..... ......-....++++.|.+..|.... ..+.|...++...... .+..
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~ 163 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQ--VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVP 163 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCE--EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEEC
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEE--EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEEC
Confidence 5 3 556666667789999998764421 22223445678999998655565554 2568888887654433 3333
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~ 759 (819)
.-.....+++++++..++.+-. ..+.|...|+..+..............+++.. ..++.+ -...+.|...|..++
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~--~~ly~t-D~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLPHPFGLTQYQ--DYIYWT-DWSRRSIERANKTSG 238 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCSCEEEEEEET--TEEEEE-ETTTTEEEEEETTTC
T ss_pred CCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCCCceEEEEEC--CEEEEe-cCCCCEEEEEECCCC
Confidence 4566789999999888888765 67899999997654422223344566777754 455554 456788999997766
Q ss_pred cEEEEEe
Q psy10114 760 TQVAKLT 766 (819)
Q Consensus 760 k~l~sl~ 766 (819)
+....+.
T Consensus 239 ~~~~~l~ 245 (628)
T 4a0p_A 239 QNRTIIQ 245 (628)
T ss_dssp CSCEEEE
T ss_pred CceEEEe
Confidence 5544443
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.015 Score=61.22 Aligned_cols=201 Identities=10% Similarity=0.012 Sum_probs=123.8
Q ss_pred ceEEEEEecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC--Ce
Q psy10114 587 AKQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND--NR 662 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D--Gt 662 (819)
.+.+..+... .....++|+ ++.+++...++.|..+|..... ...........+++++++|+.+++.... ..
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~----~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ----QIHATVEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE----EEEEECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCce----EEEEeCCCCceeEEEcCCCcEEEEeccCCcce
Confidence 4455555432 456678884 5566666678899999876532 1122233568899999999976665433 24
Q ss_pred EEEEECCCCceeEEEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-eEEE-------c---CCCCeEE
Q psy10114 663 LYVWNLHSMSPLQTYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-MQCV-------D---TGSQVCN 730 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-v~~l-------~---~~s~V~s 730 (819)
|..+|..+++....... .......++..+++ .++++.. .++.|.++|..+++. +... . .-.....
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~png 173 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG 173 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEEC--CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCC
Confidence 77788777765433221 12233455555544 4555542 578999999876532 2111 0 1123455
Q ss_pred EEEccCCCEEEEEEecCCCeEEEEECCC-CcE--EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 731 LAWSKHSSELVSTHGYSQNQILVWKYPT-LTQ--VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 731 LafSpdg~~LastsGssDg~I~IWDl~s-~k~--l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
+ +++++.++++ ....+.|..+++.. ++. ...+.. ......++++++|++.++....+.|.+++..
T Consensus 174 i--s~dg~~lyv~-d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 174 L--KRFGNFLYVS-NTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp E--EEETTEEEEE-ETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred c--CcCCCEEEEE-eCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 5 8899888775 45678999999864 321 111211 1345678999999987777778899999875
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.018 Score=66.07 Aligned_cols=243 Identities=10% Similarity=0.040 Sum_probs=145.2
Q ss_pred CCeEEEEEcC-CCCEEEEEec-CceEEEeecCCceEEEEEecC---CCCeEEEEe---------CCceeeeccCCC----
Q psy10114 556 NSVTSVAWNE-RGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGH---TARVGALAW---------NGDMLSSGSRDR---- 617 (819)
Q Consensus 556 ~~VtsLafSp-dG~~LAsGs~-DGtI~IWDl~tgk~i~tl~gH---s~~V~sLaw---------ng~~LaSGS~DG---- 617 (819)
.....|+|+| ++..|+++.. .+.|++.|.+++......... ......++| +++.|+++...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 3567899998 3555555544 467899998877766554432 235788998 466555554443
Q ss_pred ---eEEEEECCC-CCccc---eEEEecccCCeEEEEECCC-CCEEEEEECCCeEEEEECC-------CCce---------
Q psy10114 618 ---MILQRDVRT-PNSQS---ERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRLYVWNLH-------SMSP--------- 673 (819)
Q Consensus 618 ---tI~IWDi~t-~~~~~---v~~l~gH~~~VtsLafSpd-g~~LaSGS~DGtI~IWDl~-------t~~~--------- 673 (819)
.|.+.+... +.... ...+.. -....+++.+|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 366666333 12110 012221 234567889994 5555666678889999987 4543
Q ss_pred --eEE-Ee-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEEC--CCCcee--EEE-cC----C-----------CCeE
Q psy10114 674 --LQT-YT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT--LTGQPM--QCV-DT----G-----------SQVC 729 (819)
Q Consensus 674 --i~t-~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl--~tg~~v--~~l-~~----~-----------s~V~ 729 (819)
... +. +....-..++|+|+|+.++++-. ..+.|+.+|. .++... ..+ .. + ....
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 112 22 22344578999999997777654 6788998654 333220 111 11 0 1234
Q ss_pred -EEEEc-------cCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC------------------------CCCEEEEEE
Q psy10114 730 -NLAWS-------KHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH------------------------SYRVLYLAM 777 (819)
Q Consensus 730 -sLafS-------pdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH------------------------~~~VtsLaf 777 (819)
.++.. .+|...++ -..+++|+.++ +++ .+.++.+. -.....+++
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVa--D~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFV--DRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEE--EGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred EEEEEccccccccCCCeEEEE--ECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 44444 34444444 56678999998 556 34455432 123678999
Q ss_pred ecC-CCEEEEEeCCCcEEEEECCCCceec
Q psy10114 778 SPD-GEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 778 SpD-G~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+++ |.+.++=+....||.++++......
T Consensus 452 d~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 452 DDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred ECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 997 7766766678899999998765543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.021 Score=59.86 Aligned_cols=198 Identities=14% Similarity=0.226 Sum_probs=129.2
Q ss_pred EEecCCCCeEEEEeC--Cc-eeeeccCCCeEEEEECCCCCccceEEEe-cccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 592 KLVGHTARVGALAWN--GD-MLSSGSRDRMILQRDVRTPNSQSERRLV-GHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~gHs~~V~sLawn--g~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
.+.+-...+..++++ ++ ++++...++.|...|.. ++. ...+. +.....-++++.+++.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v--~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL--IRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE--EEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE--EEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 445666789999995 34 45557778999999987 442 23332 2235688999998887767665678899998
Q ss_pred CCCCce---eEEEe------cCCCCEEEEEEcCCCCeEEEEEccCCCC-eEEEEEC-CCCceeEEEc--------CCCCe
Q psy10114 668 LHSMSP---LQTYT------EHLAAVKAIAWSPHHHGLLASGGGTADR-CIRFWNT-LTGQPMQCVD--------TGSQV 728 (819)
Q Consensus 668 l~t~~~---i~t~~------~h~~~VtsLafSPdg~~LLaSGgGs~Dg-tIrIWDl-~tg~~v~~l~--------~~s~V 728 (819)
+..... +.... ........++|+|.++.++++.. .+. .|..|+- ..+..+.... .-..+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E--~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE--KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE--SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC--cCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 865442 22221 13445689999999988888764 333 5555651 1111222221 12357
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCC---------CCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS---------YRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~---------~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
.+++++|....+++. ...++.+..+|.. ++.+..+.-.. ...-.++|.++|+..++ ++...++.++
T Consensus 176 S~l~~dp~tg~lliL-S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVL-SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp CEEEEETTTTEEEEE-ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred eeEEEcCCCCeEEEE-ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 899999988888876 5677889999965 55665554221 25789999999985555 6666555543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.02 Score=64.18 Aligned_cols=229 Identities=10% Similarity=0.113 Sum_probs=128.7
Q ss_pred EEEecC----CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc-----eEEEeecCCce
Q psy10114 518 LVDWSS----QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG-----YVQVWDVSVAK 588 (819)
Q Consensus 518 ~ldwS~----~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG-----tI~IWDl~tgk 588 (819)
.+.|++ +.|..+...+.|+.+|..++++..+. .......+++++++|+ |+++...+ .+...+...+.
T Consensus 143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~---~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT---TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC---CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee---cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 345553 56666655588999999888766542 2446689999999999 55554321 23333332221
Q ss_pred E-EEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEE-ECCCeE
Q psy10114 589 Q-VHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG-GNDNRL 663 (819)
Q Consensus 589 ~-i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSG-S~DGtI 663 (819)
. ...+. .-.....++++ +.+.++-..++.|+.+|..++.........+....-..++|+|+++.|..+ ...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1 01111 12223345553 445556567788999998755421111111122233579999999955544 556789
Q ss_pred EEEECC--CCce--eEEEecC---------------CCCEEEEEE---------cCCCCeEEEEEccCCCCeEEEEECCC
Q psy10114 664 YVWNLH--SMSP--LQTYTEH---------------LAAVKAIAW---------SPHHHGLLASGGGTADRCIRFWNTLT 715 (819)
Q Consensus 664 ~IWDl~--t~~~--i~t~~~h---------------~~~VtsLaf---------SPdg~~LLaSGgGs~DgtIrIWDl~t 715 (819)
..+|.. ++.. ...+.+. -.....+++ .+++. ++++-. ..+.|+.++. +
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~--~n~~I~~~~~-~ 373 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDR--DSHTVRVLTP-E 373 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEET--TTTEEEEECT-T
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEEC--CCCEEEEECC-C
Confidence 998865 2321 1222211 123567888 55554 555543 6788999985 5
Q ss_pred CceeEEEcCC------------------CCeEEEEEc-cCCCEEEEEEecCCCeEEEEECC
Q psy10114 716 GQPMQCVDTG------------------SQVCNLAWS-KHSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 716 g~~v~~l~~~------------------s~V~sLafS-pdg~~LastsGssDg~I~IWDl~ 757 (819)
|........+ .....++++ ++|...++ -..++.|+.++.+
T Consensus 374 G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa--D~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIG--DCDNHRVRKIAPE 432 (433)
T ss_dssp SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEE--EGGGTEEEEEEEC
T ss_pred CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEE--eCCCCEEEEEecC
Confidence 5443333211 236788998 45544444 4456778777653
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.036 Score=67.11 Aligned_cols=231 Identities=13% Similarity=0.010 Sum_probs=145.8
Q ss_pred EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCc--cceEEEecccCCeE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNS--QSERRLVGHRQEVC 643 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~--~~v~~l~gH~~~Vt 643 (819)
+|+.+. ...|+..++...+...... ....+..++++ +.++++-...+.|+.+++..... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444443 3457788887665444443 34567788884 34556666678898888875321 11223333445677
Q ss_pred EEEECCCCCEE-EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE
Q psy10114 644 GLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 644 sLafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l 722 (819)
+|++.+.++.| ++-...+.|.+.++........+.........|+++|.+..|+.+-.| ..+.|...++........+
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecCCCceEEEE
Confidence 89998877555 455567899999987655444444445568999999987778877532 2378999998755544444
Q ss_pred cCC-CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 723 DTG-SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG--HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 723 ~~~-s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g--H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
..+ .....|++++.+..|+.+ -...+.|...++........+.. ......+|++..+ .+.++-...+.|...|..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwa-D~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEE-eCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCC
Confidence 333 568999999888888886 34567899999865444444433 2234567777433 344455566788888876
Q ss_pred CCcee
Q psy10114 800 SKVRS 804 (819)
Q Consensus 800 s~~~~ 804 (819)
+++..
T Consensus 632 tG~~~ 636 (791)
T 3m0c_C 632 TGSDV 636 (791)
T ss_dssp TCCCC
T ss_pred CCcce
Confidence 66543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0043 Score=74.36 Aligned_cols=238 Identities=12% Similarity=0.030 Sum_probs=128.4
Q ss_pred eEEEEEec-C--CeEEEE-ECCC----eEEEEEcCCC-ceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-----ceEE
Q psy10114 515 YLNLVDWS-S--QNVLSV-GLGS----CVYLWSACTS-QVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-----GYVQ 580 (819)
Q Consensus 515 yv~~ldwS-~--~~LLa~-g~Dg----~V~LWd~~tg-~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-----GtI~ 580 (819)
.+....|| + +.++-+ ..+| .|+++|+.++ +... ..+. ....+++|+|||+.|+....| ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-cccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 56667777 4 344433 3232 4999999988 6211 0011 113468999999988887765 3688
Q ss_pred EeecCCce--EEEEEe-cCCCCeEEEEe--CCceeeecc---CCCeEEEEECCCCCccc--eEEEecccCCeEEEEECCC
Q psy10114 581 VWDVSVAK--QVHKLV-GHTARVGALAW--NGDMLSSGS---RDRMILQRDVRTPNSQS--ERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 581 IWDl~tgk--~i~tl~-gHs~~V~sLaw--ng~~LaSGS---~DGtI~IWDi~t~~~~~--v~~l~gH~~~VtsLafSpd 650 (819)
++++.++. ....+. ........+.| +|+.|+..+ ....|.++|+.++.... ........+....+.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~- 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG- 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-
Confidence 88887653 223333 22334567778 566665443 34578888988753222 222233344455555543
Q ss_pred CCEEEEEECC-----CeEEEEECCCCceeEE-EecCCC--CEEEEEEcCCCCeEEEEEccCCCCe--EEEEEC-------
Q psy10114 651 NQYLASGGND-----NRLYVWNLHSMSPLQT-YTEHLA--AVKAIAWSPHHHGLLASGGGTADRC--IRFWNT------- 713 (819)
Q Consensus 651 g~~LaSGS~D-----GtI~IWDl~t~~~i~t-~~~h~~--~VtsLafSPdg~~LLaSGgGs~Dgt--IrIWDl------- 713 (819)
|+.|+..++. ..|..+|+.++..... +..+.. .+..+.+ .+..++++.. .++. |.++|+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~--~~g~~~l~~~dl~~~~~~~ 405 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGR--RAGLTRIWTMMADSQDGVF 405 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEE--ETTEEEEEEEECCTTTSCC
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEE--eCCEEEEEEEecccccccc
Confidence 5555544433 2678888765322222 223333 3444444 4667777764 5664 566675
Q ss_pred CCCceeEEEcCCCC--eEEEEE----ccCCCEEEEEEecCC--CeEEEEECCCCcE
Q psy10114 714 LTGQPMQCVDTGSQ--VCNLAW----SKHSSELVSTHGYSQ--NQILVWKYPTLTQ 761 (819)
Q Consensus 714 ~tg~~v~~l~~~s~--V~sLaf----Spdg~~LastsGssD--g~I~IWDl~s~k~ 761 (819)
.+++....+..... +..+.+ +++++.++....+.. ..+..+|+.+++.
T Consensus 406 ~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 406 KAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred cCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 34441444443333 333433 346665555432222 4577777766653
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.029 Score=62.78 Aligned_cols=223 Identities=9% Similarity=0.101 Sum_probs=128.3
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-c----eEEEeecCCceEE--EEEec
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-G----YVQVWDVSVAKQV--HKLVG 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-G----tI~IWDl~tgk~i--~tl~g 595 (819)
++.+..+..++.|+.+|..++++..+.. .......++|+++|+.|+++... + .+...+.. +... ..+..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~ 224 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK 224 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc
Confidence 3567777666889999998877655432 35678999999999966666542 1 34334432 2211 22221
Q ss_pred CCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEE-EEECCCeEEEEECCC-
Q psy10114 596 HTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLA-SGGNDNRLYVWNLHS- 670 (819)
Q Consensus 596 Hs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~La-SGS~DGtI~IWDl~t- 670 (819)
......++++ +.++++-..++.|..+|........... .+......+++|+|+|++|. +-...+.|..+|...
T Consensus 225 -~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 225 -GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWK 302 (430)
T ss_dssp -CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred -CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcc
Confidence 2233456663 4455565677899999987644211111 11223567899999999554 445677899987653
Q ss_pred -Cce--eEEEecC---------------CCCEE-EEEEc--------CCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 671 -MSP--LQTYTEH---------------LAAVK-AIAWS--------PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 671 -~~~--i~t~~~h---------------~~~Vt-sLafS--------Pdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
++. ...+.+. -..-. .++.. +++ .++++-. ..+.|+.+| .+|+......
T Consensus 303 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~--~n~~I~~i~-~~G~v~~~~g 378 (430)
T 3tc9_A 303 TKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDR--ENHCIRILT-PQGRVTTFAG 378 (430)
T ss_dssp TTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEG--GGTEEEEEC-TTSEEEEEEE
T ss_pred cccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEEC--CCcEEEEEC-CCCcEEEEEe
Confidence 211 2222211 01122 45543 223 3555543 567888888 4565443332
Q ss_pred C---------C---------CCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 724 T---------G---------SQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 724 ~---------~---------s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
. + .....+++++++..|+++ ...++.|+.++.
T Consensus 379 ~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa-D~~n~rIr~i~~ 428 (430)
T 3tc9_A 379 RGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIG-DRENRRIRKIGY 428 (430)
T ss_dssp CCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEE-EGGGTEEEEEEE
T ss_pred CCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEE-ECCCCeEEEEcc
Confidence 2 1 147889999865555553 445677877764
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.052 Score=63.93 Aligned_cols=228 Identities=11% Similarity=-0.010 Sum_probs=149.9
Q ss_pred EEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEeC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCG 644 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~Vts 644 (819)
+|+.+ ..+.|+..|+++.+....+. ..-.....++|+ +...++-..++.|..+++...... ...........+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLDYPEG 84 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCCCcce
Confidence 44444 45678889988654433322 223467788884 345556667889999998764422 222222245778
Q ss_pred EEECCCCCEE-EEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 645 LKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 645 LafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
+++.+.++.| ++-...+.|.+.++........+...-....+|+++|....++.+--| ..+.|...++..........
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~l~~ 163 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTTLVP 163 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEEC
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEEEEC
Confidence 9998765555 554556789999987554333333444567899999977777777522 35788888887655444445
Q ss_pred CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 724 TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 724 ~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
.......++++++++.|+.+ -...+.|...|+..... ..+........++++.. +...++-...+.|...|..+++.
T Consensus 164 ~~~~P~GlalD~~~~~LY~a-D~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWT-DLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCcceEEEccccCEEEEE-ECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 55678999999998888886 44678899999875443 33444445567888865 44455555578899888776654
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.58 E-value=0.2 Score=63.09 Aligned_cols=274 Identities=9% Similarity=0.055 Sum_probs=158.1
Q ss_pred EecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCC------CCEEEEEec-CceEEEeecCCceEEEE
Q psy10114 520 DWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNER------GNLVAVGTH-HGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 520 dwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpd------G~~LAsGs~-DGtI~IWDl~tgk~i~t 592 (819)
+-++..++.+. ++.+..++..++++....... -.+.|.|+++.+. ++++|+|.. |++|+|+++.+.+.+..
T Consensus 520 s~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~ 597 (1158)
T 3ei3_A 520 SCNSSQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHK 597 (1158)
T ss_dssp EECSSEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EeCCCEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEE
Confidence 33455555554 778888888776655443322 2468999999863 479999997 99999999988766654
Q ss_pred Eec-CCCCeEEEEe---C-CceeeeccCCCeEEEEECCC--CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 593 LVG-HTARVGALAW---N-GDMLSSGSRDRMILQRDVRT--PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 593 l~g-Hs~~V~sLaw---n-g~~LaSGS~DGtI~IWDi~t--~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
..- ......++.. . ..+|..|-.||.+.-+.++. ++....++..-...++.-..+...|..-+.+..+....+
T Consensus 598 ~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~li 677 (1158)
T 3ei3_A 598 EMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 677 (1158)
T ss_dssp EECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEE
T ss_pred EECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEE
Confidence 332 1233444444 3 34788999999987666543 322212222222345544444444443333333444444
Q ss_pred EECCCCceeEEEecCCCCE-EEEEEcCCC--CeEEEEEccCCCCeEEEEECCC--CceeEEEcCCCCeEEEEEccCCCEE
Q psy10114 666 WNLHSMSPLQTYTEHLAAV-KAIAWSPHH--HGLLASGGGTADRCIRFWNTLT--GQPMQCVDTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~V-tsLafSPdg--~~LLaSGgGs~DgtIrIWDl~t--g~~v~~l~~~s~V~sLafSpdg~~L 740 (819)
+.-+ ++....- -....+ ....|+..+ ..++++ .++.++|..+.+ .-.++++..+..+..++++|+.+.+
T Consensus 678 y~~~-~~l~~s~-l~~~~v~~~~~F~se~~~~g~v~~----~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~ 751 (1158)
T 3ei3_A 678 YSSN-HKLVFSN-VNLKEVNYMCPLNSDGYPDSLALA----NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCF 751 (1158)
T ss_dssp EESS-SSEEEEE-BSSSCCCEEEEECCSSSTTEEEEE----CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEE
T ss_pred EEcC-CceEEec-cChHHhceEeccCcccCCCcEEEE----cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEE
Confidence 4433 3322111 111122 233454322 345544 356688887654 3345666778889999999988876
Q ss_pred EEEEecC-----------------------------------------------CCeEEEEECCCCcEEEEEec-CCCCE
Q psy10114 741 VSTHGYS-----------------------------------------------QNQILVWKYPTLTQVAKLTG-HSYRV 772 (819)
Q Consensus 741 astsGss-----------------------------------------------Dg~I~IWDl~s~k~l~sl~g-H~~~V 772 (819)
+++.... .+.|++.|-.+++.+..+.- ....+
T Consensus 752 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~ 831 (1158)
T 3ei3_A 752 GVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYA 831 (1158)
T ss_dssp EEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEE
T ss_pred EEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcce
Confidence 6543210 13477778777777665542 23445
Q ss_pred EEEEE---ecC-CCEEEEEe----------CCCcEEEEECCCC
Q psy10114 773 LYLAM---SPD-GEAIVTGA----------GDETLRFWNVFSK 801 (819)
Q Consensus 773 tsLaf---SpD-G~~LaSGS----------~DGtIrIWdl~s~ 801 (819)
.+++. ..+ ..+++.|+ ..|.|.++++.++
T Consensus 832 ~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~ 874 (1158)
T 3ei3_A 832 LSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG 874 (1158)
T ss_dssp EEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT
T ss_pred EEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC
Confidence 55553 222 46888886 3478999998744
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.022 Score=62.48 Aligned_cols=192 Identities=13% Similarity=0.209 Sum_probs=127.1
Q ss_pred CCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe------CCc---eeeecc-C--CCeEEEEECCCCCccceE
Q psy10114 566 RGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW------NGD---MLSSGS-R--DRMILQRDVRTPNSQSER 633 (819)
Q Consensus 566 dG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw------ng~---~LaSGS-~--DGtI~IWDi~t~~~~~v~ 633 (819)
....++....++-+.+||+ +|+.++.+.. ++++.+.. .+. ++++.. . +++|.++++...... +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666677788999999 8999988864 55565554 333 223333 3 579999977422211 22
Q ss_pred EEec------cc-CCeEEEEE--CCC-CC-EEEEEECCCeEEEEECC-------CCceeEEEecCCCCEEEEEEcCCCCe
Q psy10114 634 RLVG------HR-QEVCGLKW--SPD-NQ-YLASGGNDNRLYVWNLH-------SMSPLQTYTEHLAAVKAIAWSPHHHG 695 (819)
Q Consensus 634 ~l~g------H~-~~VtsLaf--Spd-g~-~LaSGS~DGtI~IWDl~-------t~~~i~t~~~h~~~VtsLafSPdg~~ 695 (819)
.+.. .. ..+.++++ +++ ++ ++++...+|.+..|++. +.+.++++.. .+.+..++..+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 2211 11 56777888 774 44 67788889999999883 2345667664 467888999988887
Q ss_pred EEEEEccCCCCeEEEEECC-----CCceeEEEcCC---CCeEEEEE--ccCCC-EEEEEEecCCCeEEEEECC-CCcEEE
Q psy10114 696 LLASGGGTADRCIRFWNTL-----TGQPMQCVDTG---SQVCNLAW--SKHSS-ELVSTHGYSQNQILVWKYP-TLTQVA 763 (819)
Q Consensus 696 LLaSGgGs~DgtIrIWDl~-----tg~~v~~l~~~---s~V~sLaf--Spdg~-~LastsGssDg~I~IWDl~-s~k~l~ 763 (819)
+++.- +|.-|..+|.+ +++.+..+..+ ..+..+++ .++++ +++++ .-.++...+||.. +.+.+.
T Consensus 194 Lyv~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS-sQG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 194 LYIAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS-SQGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp EEEEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE-EGGGTEEEEEESSTTCCEEE
T ss_pred EEEec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE-cCCCCEEEEEECCCCCcEEE
Confidence 77754 66667777755 34555555433 46888888 45666 56654 4457899999996 777888
Q ss_pred EEe
Q psy10114 764 KLT 766 (819)
Q Consensus 764 sl~ 766 (819)
.+.
T Consensus 270 ~f~ 272 (355)
T 3amr_A 270 DFR 272 (355)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.13 Score=60.44 Aligned_cols=162 Identities=11% Similarity=-0.032 Sum_probs=108.7
Q ss_pred CCeEEEEECCCCCEEEEE-ECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce
Q psy10114 640 QEVCGLKWSPDNQYLASG-GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP 718 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSG-S~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~ 718 (819)
..+.+++|++.+..|..+ ...+.|+.++.........+...-.....+++...+..++.+-. ..+.|.+.++.....
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~--~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDT--GTDRIEVTRLNGTMR 426 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETTSCSC
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeC--CCCcEEEEeCCCCeE
Confidence 457889999865555544 45778999998765443344433456778999987777888764 678999999876543
Q ss_pred eEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe-CCCcEEEE
Q psy10114 719 MQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRFW 796 (819)
Q Consensus 719 v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS-~DGtIrIW 796 (819)
..... .-.....+++.|....++.+..+....|...++............-....+++++++++.|..+. ..+.|...
T Consensus 427 ~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 427 KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 22222 34568999999986677664333346787777753333322333456789999998777776654 45778888
Q ss_pred ECCCCce
Q psy10114 797 NVFSKVR 803 (819)
Q Consensus 797 dl~s~~~ 803 (819)
++....+
T Consensus 507 ~~dG~~~ 513 (619)
T 3s94_A 507 NTDGTGR 513 (619)
T ss_dssp ESSSCCC
T ss_pred ecCCCce
Confidence 8865543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.029 Score=60.87 Aligned_cols=226 Identities=14% Similarity=0.174 Sum_probs=124.3
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE--EEEEe---cCCCCeEEEEeCCc-----eeeeccC-C-----Ce
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ--VHKLV---GHTARVGALAWNGD-----MLSSGSR-D-----RM 618 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~--i~tl~---gHs~~V~sLawng~-----~LaSGS~-D-----Gt 618 (819)
-.....++|.|+|++ +++..+|.|.+++ +++. +..+. ........++++++ .|..+.. + +.
T Consensus 30 l~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345789999999984 4556679999998 4432 22221 12356788999653 5554433 2 67
Q ss_pred EEEEECCCCCc---cce-EEEe---cccCCeEEEEECCCCCEEEEEEC-------------CCeEEEEECCCC-------
Q psy10114 619 ILQRDVRTPNS---QSE-RRLV---GHRQEVCGLKWSPDNQYLASGGN-------------DNRLYVWNLHSM------- 671 (819)
Q Consensus 619 I~IWDi~t~~~---~~v-~~l~---gH~~~VtsLafSpdg~~LaSGS~-------------DGtI~IWDl~t~------- 671 (819)
|..++...... ..+ ..+. +.......++|.|||.+.++.+. .|.|.-+|....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 77888764321 111 1122 11123468999999986666432 256666665431
Q ss_pred -----ceeEEE-ecCCCCEEEEEEcCCCCeEEEEEccCCCC-------eEEEEECCC----------------CceeEEE
Q psy10114 672 -----SPLQTY-TEHLAAVKAIAWSPHHHGLLASGGGTADR-------CIRFWNTLT----------------GQPMQCV 722 (819)
Q Consensus 672 -----~~i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~Dg-------tIrIWDl~t----------------g~~v~~l 722 (819)
.....+ .++ .....++|+|+...++++-.| .+. .|.+..... ..++..+
T Consensus 187 ~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g-~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 187 LGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHG-PSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEEC-C------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcC-CCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 011111 122 235678999943345554432 222 244432211 0123333
Q ss_pred cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE------EEEEecCCCCEEEEEEecCCCEEEEEe
Q psy10114 723 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ------VAKLTGHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 723 ~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~------l~sl~gH~~~VtsLafSpDG~~LaSGS 788 (819)
........++| .+|+.+++ ....+.|...++..... ...+..-..++..+++.|||.+.++..
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~--~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVA--GLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEE--ETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-ECCEEEEE--ECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 33445677888 46655554 55667888887753321 122223346899999999998777654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0059 Score=63.63 Aligned_cols=232 Identities=12% Similarity=0.088 Sum_probs=119.1
Q ss_pred CCCEEEEEe-cC-----ceEEEeecCCceEEEE--EecCCCCeEEEEeCCceeeeccCC-----CeEEEEECCCCC---c
Q psy10114 566 RGNLVAVGT-HH-----GYVQVWDVSVAKQVHK--LVGHTARVGALAWNGDMLSSGSRD-----RMILQRDVRTPN---S 629 (819)
Q Consensus 566 dG~~LAsGs-~D-----GtI~IWDl~tgk~i~t--l~gHs~~V~sLawng~~LaSGS~D-----GtI~IWDi~t~~---~ 629 (819)
++..++.|+ .+ ..+.++|..+++-... +........++..++..++.|+.+ ..+.++|..+.+ .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 345566665 32 3688889887653321 112222233445577777877765 468899998876 4
Q ss_pred cceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECCCCce--eEEEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 630 QSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLHSMSP--LQTYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~t~~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
.....+.........+.. +++.++.|+.+ +.+.++|..+.+- +...........++.. + ..+++.||.
T Consensus 94 ~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~ 168 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--S-GVIYCLGGY 168 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--T-TEEEEECCB
T ss_pred EECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--C-CEEEEECCC
Confidence 333222222222223333 56777777654 3688999877642 2222211112222222 3 346666651
Q ss_pred C---CCCeEEEEECCCCceeEEEcCCCC--eEEEEEccCCCEEEEEEecC----CCeEEEEECCCCcEEEEEecCCCCEE
Q psy10114 703 T---ADRCIRFWNTLTGQPMQCVDTGSQ--VCNLAWSKHSSELVSTHGYS----QNQILVWKYPTLTQVAKLTGHSYRVL 773 (819)
Q Consensus 703 s---~DgtIrIWDl~tg~~v~~l~~~s~--V~sLafSpdg~~LastsGss----Dg~I~IWDl~s~k~l~sl~gH~~~Vt 773 (819)
. .-..+.+||..+++-...-..... -.+++. -++ .+++.+|.. .+.+.+||..+.+-...-.....+..
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LND-HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECC-EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 1 125688999988754333211111 112222 234 455543332 35689999887654322111111111
Q ss_pred EEEEecCCCEEEEEeCC-----CcEEEEECCCCcee
Q psy10114 774 YLAMSPDGEAIVTGAGD-----ETLRFWNVFSKVRS 804 (819)
Q Consensus 774 sLafSpDG~~LaSGS~D-----GtIrIWdl~s~~~~ 804 (819)
..+..-+++.++.|+.+ ..+.+||..+.+-.
T Consensus 247 ~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 247 VGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp CEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred eeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 11222367777777765 35788898876644
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.09 Score=57.19 Aligned_cols=229 Identities=10% Similarity=0.084 Sum_probs=127.4
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-EEEEEe---cCCCCeEEEEeCCc-----eeeeccC----C----C
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-QVHKLV---GHTARVGALAWNGD-----MLSSGSR----D----R 617 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-~i~tl~---gHs~~V~sLawng~-----~LaSGS~----D----G 617 (819)
-.....++|.|+|+ |+++..+|.|.++| .+++ .+..+. ........|+++++ .|.++.. + +
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 35678999999997 55556679999997 4454 222211 12356788999643 4544332 3 5
Q ss_pred eEEEEECCCCC--c---cce-EEEec-ccCCeEEEEECCCCCEEEEEEC-------------CCeEEEEECCCCc-----
Q psy10114 618 MILQRDVRTPN--S---QSE-RRLVG-HRQEVCGLKWSPDNQYLASGGN-------------DNRLYVWNLHSMS----- 672 (819)
Q Consensus 618 tI~IWDi~t~~--~---~~v-~~l~g-H~~~VtsLafSpdg~~LaSGS~-------------DGtI~IWDl~t~~----- 672 (819)
.|..++..... . ..+ ..+.. .......++|.|||.++++.+. .|.|.-+|....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 67777766541 1 111 11211 1113467999999987776442 2456666654320
Q ss_pred --eeEEE-ecCCCCEEEEEEcCCCCeEEEEEccCCC-CeEEEEECCC----------------CceeEEE-cCCCCeEEE
Q psy10114 673 --PLQTY-TEHLAAVKAIAWSPHHHGLLASGGGTAD-RCIRFWNTLT----------------GQPMQCV-DTGSQVCNL 731 (819)
Q Consensus 673 --~i~t~-~~h~~~VtsLafSPdg~~LLaSGgGs~D-gtIrIWDl~t----------------g~~v~~l-~~~s~V~sL 731 (819)
....+ .++. ....++|+|+...++++-.|... ..|.+..... ..++..+ ........+
T Consensus 186 f~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp STTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 01111 2332 34679999943345555432111 2343332110 0123333 234567888
Q ss_pred EEc-------cCCCEEEEEEecCCCeEEEEECCCC-cEE--EEEe-cCCCCEEEEEEecCCCEEEEEe
Q psy10114 732 AWS-------KHSSELVSTHGYSQNQILVWKYPTL-TQV--AKLT-GHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 732 afS-------pdg~~LastsGssDg~I~IWDl~s~-k~l--~sl~-gH~~~VtsLafSpDG~~LaSGS 788 (819)
+|. .+|+.+++ ....+.|...++... +.. ..+. +-..++..+++.|||.+.++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~--~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIA--CLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEE--ETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEE--EcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 883 56666655 566788988888753 222 2332 2246799999999998766654
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00039 Score=83.03 Aligned_cols=239 Identities=10% Similarity=0.003 Sum_probs=140.7
Q ss_pred ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCC----ceEEEEEecCCCCeEEEE
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSV----AKQVHKLVGHTARVGALA 604 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~t----gk~i~tl~gHs~~V~sLa 604 (819)
+..+.|+..+..+.+...+. .....+..++|++.+..|+.+. ..+.|+.+++.. ......+.........|+
T Consensus 383 ~~~~~I~~id~~~~~~~~~~---~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gla 459 (699)
T 1n7d_A 383 TNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 459 (699)
T ss_dssp CCTTC-CEECTTSCCEECCS---CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEE
T ss_pred cCccceEEEeCCCCcceeee---ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEE
Confidence 44567788888776654321 2234567899998777666654 457899988875 222211211112233455
Q ss_pred eC---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CC-CeEEEEECCCCceeEEEec
Q psy10114 605 WN---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-ND-NRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 605 wn---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~D-GtI~IWDl~t~~~i~t~~~ 679 (819)
++ ++++++-...+.|.+.+....... ..+........+++++|++..|+.+. .. +.|.+.++...........
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSSCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEeeCCcEEEEeccCCeEEEEecCCCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 53 445556566788999998764321 22222234567889998665554443 22 6788887754332222222
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEEEEC
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILVWKY 756 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~IWDl 756 (819)
.-.....|+|+|++..|+++-. ..+.|..+|+........+.. ......+++.. ..++.+ ....+.|..++.
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywt-d~~~~~V~~~d~ 612 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWT-DIINEAIFSANR 612 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEE-CSTTTCEEEEET
T ss_pred CCCCccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEE-eCCCCeEEEEEc
Confidence 2344578999999888888765 678999999875433322221 12344555543 455554 456789999998
Q ss_pred CCCcEEEEEecCCCCEEEEEEe
Q psy10114 757 PTLTQVAKLTGHSYRVLYLAMS 778 (819)
Q Consensus 757 ~s~k~l~sl~gH~~~VtsLafS 778 (819)
.+++.+..+........++++.
T Consensus 613 ~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 613 LTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp TTEEEEECCCTTCSSCCCCCBC
T ss_pred cCCCceEEeecCCCCCcEEEEe
Confidence 8888877765433344555443
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.058 Score=63.39 Aligned_cols=229 Identities=10% Similarity=-0.002 Sum_probs=135.3
Q ss_pred EEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-CceEEEeecCCceE-EEEEecCCCCeEEEEe
Q psy10114 528 SVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQ-VHKLVGHTARVGALAW 605 (819)
Q Consensus 528 a~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DGtI~IWDl~tgk~-i~tl~gHs~~V~sLaw 605 (819)
.-.....|+..++......... .....+....++|++.+..|+.+.. .+.|..++++.... ...+...-.....+++
T Consensus 13 ~~~~~~~I~~i~~~~~~~~~~~-~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv 91 (619)
T 3s94_A 13 LYANRRDLRLVDATNGKENATI-VVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 91 (619)
T ss_dssp EEECSSBEEEECCC----------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE
T ss_pred EEeccccEEEEeCCCCcceEEE-EEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE
Confidence 3455677788887654311111 2223456889999997777766654 67888888875532 2233333345667777
Q ss_pred C---CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC--CCeEEEEECCCCceeEEEecC
Q psy10114 606 N---GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN--DNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 606 n---g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~--DGtI~IWDl~t~~~i~t~~~h 680 (819)
+ ++..++-...+.|.+.+.+..... ......-....++++.|.+..|..... .+.|...++............
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~ 169 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 169 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCCEE--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC
Confidence 3 445666667899999998764422 222234456778999997665555542 467877777544333333334
Q ss_pred CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC
Q psy10114 681 LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 681 ~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~ 759 (819)
-.....+++++++..++.+-. ..+.|...|+.......... .......+++..+ .++.+ ....+.|...|..++
T Consensus 170 ~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~t-d~~~~~V~~~d~~tg 244 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWT-DWSTHSILACNKYTG 244 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCCEEC---------CCCEEESSS--EEEEE-CTTTCSEEEEESSSC
T ss_pred CCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEe-cCCCCEEEEEECCCC
Confidence 456789999998888888765 67889999987644333222 1223346666544 55553 456778888888776
Q ss_pred cEEEE
Q psy10114 760 TQVAK 764 (819)
Q Consensus 760 k~l~s 764 (819)
+....
T Consensus 245 ~~~~~ 249 (619)
T 3s94_A 245 EGLRE 249 (619)
T ss_dssp CCCEE
T ss_pred cccEE
Confidence 54433
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.05 Score=56.71 Aligned_cols=219 Identities=14% Similarity=0.118 Sum_probs=117.6
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC----ceEEEeecCCceEEEEE--ecCCCCeEEEEe
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH----GYVQVWDVSVAKQVHKL--VGHTARVGALAW 605 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D----GtI~IWDl~tgk~i~tl--~gHs~~V~sLaw 605 (819)
.+.+.++|..+++...+..+........++.. ++..++.|+.+ ..+.+||..+++-...- ......-.++..
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 36799999999887766554433333333333 56677777754 67889999887543322 222222334455
Q ss_pred CCceeeeccCC------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC---------CCeEEEEECCC
Q psy10114 606 NGDMLSSGSRD------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN---------DNRLYVWNLHS 670 (819)
Q Consensus 606 ng~~LaSGS~D------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~---------DGtI~IWDl~t 670 (819)
++..++.|+.+ ..+.++|..+.+......+.........+.. +++.++.|+. -+.+.+||..+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 77777887765 4688999887654332222211122222222 5666677654 34588999877
Q ss_pred CceeEE--EecCCCCEEEEEEcCCCCeEEEEEccCC---CCeEEEEECCCCceeEEEc--CC-CCeEEEEEccCCCEEEE
Q psy10114 671 MSPLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTA---DRCIRFWNTLTGQPMQCVD--TG-SQVCNLAWSKHSSELVS 742 (819)
Q Consensus 671 ~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~---DgtIrIWDl~tg~~v~~l~--~~-s~V~sLafSpdg~~Las 742 (819)
.+=... +......-..+.. +..+++.||... -..+.+||..+++-...-. .. .....+.+ ++ .+++
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v 252 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GS-IVYV 252 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TT-EEEE
T ss_pred CeEEECCCccchhhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CC-EEEE
Confidence 642111 1111111222222 344666665211 2468899998765332211 11 11222222 44 4555
Q ss_pred EEec----CCCeEEEEECCCCc
Q psy10114 743 THGY----SQNQILVWKYPTLT 760 (819)
Q Consensus 743 tsGs----sDg~I~IWDl~s~k 760 (819)
.+|. ..+.+.+||..+.+
T Consensus 253 ~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 253 LAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EECBCSSSBCCEEEEEETTTTE
T ss_pred EeCcCCCeeeeeEEEEcCCCCe
Confidence 4343 23578889987653
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.15 Score=54.28 Aligned_cols=227 Identities=11% Similarity=0.072 Sum_probs=126.4
Q ss_pred cceEEEEEecCCeEEEEECCCeEEEEEcCCCc-eEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceE-EEeecCCceEE
Q psy10114 513 DFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQ-VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYV-QVWDVSVAKQV 590 (819)
Q Consensus 513 Dfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~-~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI-~IWDl~tgk~i 590 (819)
+..+..+.++++.+++++..+.|+. ....|+ ...+.......+.+..+.+.+++..++++. +|.| +-.| .|+.-
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW 154 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNW 154 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSE
T ss_pred CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCC
Confidence 4456677777777777777776654 333333 232211112234578888877776666654 5544 3223 23322
Q ss_pred EEE-ecCCCCeEEEEeC--CceeeeccCCCeEEE-EECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 591 HKL-VGHTARVGALAWN--GDMLSSGSRDRMILQ-RDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 591 ~tl-~gHs~~V~sLawn--g~~LaSGS~DGtI~I-WDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
... .+....+.++++. +..++++ .+|.+.. .|-...... ..-......+..+.+.++++.+ .++.+|.+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~--~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s 230 (327)
T 2xbg_A 155 QALVQEAIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWE--PHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFS 230 (327)
T ss_dssp EEEECSCCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCE--EEECCSSSCEEEEEECTTSCEE-EEETTTEEEEE
T ss_pred EEeecCCCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCcee--ECCCCCCCccceeEECCCCCEE-EEeCCceEEEe
Confidence 222 3456678888884 4455444 4455443 332121211 2223445678899999988755 45567888776
Q ss_pred ECCCCceeEEEec----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc----CCCCeEEEEEccCCC
Q psy10114 667 NLHSMSPLQTYTE----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD----TGSQVCNLAWSKHSS 738 (819)
Q Consensus 667 Dl~t~~~i~t~~~----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~----~~s~V~sLafSpdg~ 738 (819)
+...++.-..+.. ....+.++++.+++. +++++ .++.+ ++....|+.-..+. ....+..+.|.+++.
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g---~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~ 305 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAG---GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ 305 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEE---STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCE-EEEEe---CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc
Confidence 4322322111211 223588999998766 55554 36766 45556666555443 235678888876555
Q ss_pred EEEEEEecCCCeEEEEE
Q psy10114 739 ELVSTHGYSQNQILVWK 755 (819)
Q Consensus 739 ~LastsGssDg~I~IWD 755 (819)
+++ .+.+|.|.-++
T Consensus 306 -~~~--~G~~G~i~~~~ 319 (327)
T 2xbg_A 306 -GFI--LGQKGILLRYV 319 (327)
T ss_dssp -EEE--ECSTTEEEEEC
T ss_pred -eEE--EcCCceEEEEc
Confidence 444 34678776665
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.38 Score=54.24 Aligned_cols=260 Identities=11% Similarity=0.065 Sum_probs=174.3
Q ss_pred CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCce
Q psy10114 531 LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDM 609 (819)
Q Consensus 531 ~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~ 609 (819)
.+.+|.|-|+.++.........+ -+.-.+|..+.+|.-. ..+++|+|+++.+.++...-.. .|.--.| +.+.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~ 118 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT 118 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTE
T ss_pred CCCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCe
Confidence 34578888887765433223322 2456788888888765 6789999999999998887544 5666777 6776
Q ss_pred eeeccCCCeEEEEECCCCCccceEEEecc----cCCeEEEEECCCCCEEEEEEC-------CCeEEEEECCCCceeEEEe
Q psy10114 610 LSSGSRDRMILQRDVRTPNSQSERRLVGH----RQEVCGLKWSPDNQYLASGGN-------DNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 610 LaSGS~DGtI~IWDi~t~~~~~v~~l~gH----~~~VtsLafSpdg~~LaSGS~-------DGtI~IWDl~t~~~i~t~~ 678 (819)
|+-.+ +..|+.|++.... .+.+.+..| ...|..-..+++.++++..|- .|.+.+|..+.+ ..+.++
T Consensus 119 l~lVT-~taVyHWsi~~~s-~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 195 (494)
T 1bpo_A 119 VALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 195 (494)
T ss_dssp EEEEC-SSEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC
T ss_pred EEEEc-CCeeEEecccCCC-CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe
Confidence 65544 4689999997633 455555554 356888888999998765432 357889998654 456777
Q ss_pred cCCCCEEEEEEcCCC--CeEEEEEc-cCCCCeEEEEECCCC---c-----eeEEE--c---CCCCeEEEEEccCCCEEEE
Q psy10114 679 EHLAAVKAIAWSPHH--HGLLASGG-GTADRCIRFWNTLTG---Q-----PMQCV--D---TGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 679 ~h~~~VtsLafSPdg--~~LLaSGg-Gs~DgtIrIWDl~tg---~-----~v~~l--~---~~s~V~sLafSpdg~~Las 742 (819)
+|.+....+....+. ..+++-+. +...+.+++-++... . ....+ . ...-..++..|+....++.
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 887665555443221 23444332 113478999998543 1 11111 1 1233567888888888887
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
. ..-|.+.+||+.++..+..-+-..+.|...+-+.+..=++.....|.|.--.+++..
T Consensus 276 i--TK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 276 I--TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp E--ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred E--ecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 4 478999999999999998888777777776666665566666788888777776544
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.021 Score=59.45 Aligned_cols=219 Identities=14% Similarity=0.096 Sum_probs=116.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-----ceEEEeecCCce---E--EEEEecCCCCeEE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVAK---Q--VHKLVGHTARVGA 602 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tgk---~--i~tl~gHs~~V~s 602 (819)
..+..+|..+.+...+..+........++.. ++..++.|+.+ ..+.+||..+++ - +..+......-.+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 4689999998887765544432222233332 56777777755 368899987765 2 2222222223334
Q ss_pred EEeCCceeeeccCC-----CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECCCCc
Q psy10114 603 LAWNGDMLSSGSRD-----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLHSMS 672 (819)
Q Consensus 603 Lawng~~LaSGS~D-----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~t~~ 672 (819)
+..++..++.|+.+ ..+.++|..+.+......+......-..+.+ +++.++.|+.+ +.+.+||..+.+
T Consensus 109 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 44577777777754 3688899887665433332222222222332 67777777754 458899987764
Q ss_pred eeEE--EecCCCCEEEEEEcCCCCeEEEEEccCC---CCeEEEEECCCCceeEEEcCC--CCeEEEEEccCCCEEEEEEe
Q psy10114 673 PLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTA---DRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 673 ~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~---DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg~~LastsG 745 (819)
=... +........++.+ +..+++.||... ...+.+||..+++-...-... ..-.+++. -+++ +++.+|
T Consensus 187 W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-i~v~GG 261 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRGR-LYAIAG 261 (301)
T ss_dssp EEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTE-EEEECC
T ss_pred EEeCCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECCE-EEEEcC
Confidence 2221 1111111222232 345777765211 356899999887643332211 11112222 2444 444433
Q ss_pred cCC----CeEEEEECCCCc
Q psy10114 746 YSQ----NQILVWKYPTLT 760 (819)
Q Consensus 746 ssD----g~I~IWDl~s~k 760 (819)
... +.+.+||..+.+
T Consensus 262 ~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCSSSBEEEEEEEETTTTE
T ss_pred cCCCcccccEEEEcCCCCe
Confidence 322 467888887543
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.014 Score=60.81 Aligned_cols=219 Identities=15% Similarity=0.126 Sum_probs=114.3
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC-----ceEEEeecCCceEEEE--EecCCCCeEEEEe
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH-----GYVQVWDVSVAKQVHK--LVGHTARVGALAW 605 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D-----GtI~IWDl~tgk~i~t--l~gHs~~V~sLaw 605 (819)
..+..+|..+.+...+..+......-..+.. ++..++.|+.+ ..+.+||..+.+-... +......-.+...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE
Confidence 4688999998887766544432222223333 56777777754 3588899887653322 2222223344555
Q ss_pred CCceeeeccCCC-----eEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-------CeEEEEECCCCce
Q psy10114 606 NGDMLSSGSRDR-----MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-------NRLYVWNLHSMSP 673 (819)
Q Consensus 606 ng~~LaSGS~DG-----tI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-------GtI~IWDl~t~~~ 673 (819)
++..++.|+.++ .+.++|..+.+......+.........+.+ +++.++.|+.+ +.+.+||..+.+=
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 788778777553 577888887654333222222222222222 56677776643 3588999877642
Q ss_pred eE--EEecCCCCEEEEEEcCCCCeEEEEEccCC---CCeEEEEECCCCceeEEEcCC--CCeEEEEEccCCCEEEEEEec
Q psy10114 674 LQ--TYTEHLAAVKAIAWSPHHHGLLASGGGTA---DRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 674 i~--t~~~h~~~VtsLafSPdg~~LLaSGgGs~---DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg~~LastsGs 746 (819)
.. .+.........+.+ +..+++.||... ...+.+||..+++-...-... ..-.+++. -+++ +++.+|.
T Consensus 186 ~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~-i~v~GG~ 260 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGL-LYVVGGD 260 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTE-EEEECCB
T ss_pred EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCE-EEEECCc
Confidence 21 11111111222222 345777665211 246889999887543322211 11112222 2444 4444333
Q ss_pred CC----CeEEEEECCCCc
Q psy10114 747 SQ----NQILVWKYPTLT 760 (819)
Q Consensus 747 sD----g~I~IWDl~s~k 760 (819)
.. ..+.+||..+.+
T Consensus 261 ~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccccEEEEcCCCCe
Confidence 22 358888887654
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.028 Score=61.67 Aligned_cols=182 Identities=12% Similarity=0.175 Sum_probs=116.7
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCC----CCE--EEEEE--C--CCeEEEEECC-CCceeEEE
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD----NQY--LASGG--N--DNRLYVWNLH-SMSPLQTY 677 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpd----g~~--LaSGS--~--DGtI~IWDl~-t~~~i~t~ 677 (819)
.++....++-+.++|+.. + .+..+.. +.+..+..-|+ |+. ++.++ . +++|.+|++. ....+..+
T Consensus 42 ~ii~t~k~~gL~Vydl~G-~--~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDG-K--MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp EEEEEETTTEEEEEETTS-C--EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred EEEEEcCCCCEEEEcCCC-c--EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 455556678899999943 3 2344432 45666665552 322 33333 3 5789999773 22234444
Q ss_pred ec------CC-CCEEEEEE--cCC-CCeEEEEEccCCCCeEEEEECC-------CCceeEEEcCCCCeEEEEEccCCCEE
Q psy10114 678 TE------HL-AAVKAIAW--SPH-HHGLLASGGGTADRCIRFWNTL-------TGQPMQCVDTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 678 ~~------h~-~~VtsLaf--SPd-g~~LLaSGgGs~DgtIrIWDl~-------tg~~v~~l~~~s~V~sLafSpdg~~L 740 (819)
.. .. ..+..+|+ +|. +...+...+ .++.+..|++. +++.++++..++++..++..+....|
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~--k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG--KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC--SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC--CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 22 11 45566777 775 443333333 67999998882 34667888889999999999999999
Q ss_pred EEEEecCCCeEEEEECC-----CCcEEEEEe-cC-CCCEEEEEE--ecCCC-EEEEEe-CCCcEEEEECC
Q psy10114 741 VSTHGYSQNQILVWKYP-----TLTQVAKLT-GH-SYRVLYLAM--SPDGE-AIVTGA-GDETLRFWNVF 799 (819)
Q Consensus 741 astsGssDg~I~IWDl~-----s~k~l~sl~-gH-~~~VtsLaf--SpDG~-~LaSGS-~DGtIrIWdl~ 799 (819)
++ +.++..|..++.+ +++.+..+. ++ ...+..|++ .++|+ +|++++ ++.++.+||..
T Consensus 195 yv--~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EE--EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EE--ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 99 7777777777754 344555442 22 246888988 45555 566555 67899999996
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.021 Score=59.65 Aligned_cols=230 Identities=8% Similarity=0.025 Sum_probs=120.2
Q ss_pred CCEEEEEec--CceEEEeecCCceEEEE--EecCCCCeEEEEeCCceeeeccCC----CeEEEEECCCCCccceEEEecc
Q psy10114 567 GNLVAVGTH--HGYVQVWDVSVAKQVHK--LVGHTARVGALAWNGDMLSSGSRD----RMILQRDVRTPNSQSERRLVGH 638 (819)
Q Consensus 567 G~~LAsGs~--DGtI~IWDl~tgk~i~t--l~gHs~~V~sLawng~~LaSGS~D----GtI~IWDi~t~~~~~v~~l~gH 638 (819)
+.+++.|+. ...+.+||..+++-... +......-.++..++..++.|+.+ ..+.++|..+.+......+...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 345556654 35688899887753322 222222334445577788888755 6788899888664333222222
Q ss_pred cCCeEEEEECCCCCEEEEEECC------CeEEEEECCCCceeEE--EecCCCCEEEEEEcCCCCeEEEEEccCC------
Q psy10114 639 RQEVCGLKWSPDNQYLASGGND------NRLYVWNLHSMSPLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTA------ 704 (819)
Q Consensus 639 ~~~VtsLafSpdg~~LaSGS~D------GtI~IWDl~t~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~------ 704 (819)
......+.+ +++.++.|+.+ +.+.+||..+.+=... +........++.. + ..+++.||...
T Consensus 92 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 92 RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--N-GLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEEEEECCEESCTTTCE
T ss_pred ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--C-CEEEEECCCCCCCCccc
Confidence 222222333 56777787765 4688999887642211 1111111122222 3 34666664211
Q ss_pred -CCeEEEEECCCCceeEEEcCCC--CeEEEEEccCCCEEEEEEecC----CCeEEEEECCCCcEEEE--EecCCCCEEEE
Q psy10114 705 -DRCIRFWNTLTGQPMQCVDTGS--QVCNLAWSKHSSELVSTHGYS----QNQILVWKYPTLTQVAK--LTGHSYRVLYL 775 (819)
Q Consensus 705 -DgtIrIWDl~tg~~v~~l~~~s--~V~sLafSpdg~~LastsGss----Dg~I~IWDl~s~k~l~s--l~gH~~~VtsL 775 (819)
-..+.+||..+++-...-.... .-.+++.. ++ .+++.+|.. ...+.+||..+.+-... +.........+
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 244 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA 244 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE
Confidence 3568899998875433222111 11122222 44 455443332 24688999876543221 11111112223
Q ss_pred EEecCCCEEEEEeCC-----CcEEEEECCCCceec
Q psy10114 776 AMSPDGEAIVTGAGD-----ETLRFWNVFSKVRSQ 805 (819)
Q Consensus 776 afSpDG~~LaSGS~D-----GtIrIWdl~s~~~~~ 805 (819)
.+ +++.++.|+.+ ..+.+||..+.+-..
T Consensus 245 ~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 245 AV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp EE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred EE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence 33 67777778754 468889998876543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.023 Score=59.68 Aligned_cols=219 Identities=14% Similarity=0.135 Sum_probs=114.5
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec----C-----ceEEEeecCCceEEEE--EecCCCCeE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH----H-----GYVQVWDVSVAKQVHK--LVGHTARVG 601 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~----D-----GtI~IWDl~tgk~i~t--l~gHs~~V~ 601 (819)
..+.++|..+.+...+..+.........+.. ++.+++.|+. + ..+.+||..+.+-... +......-.
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 4689999999887766444332222223332 5667777765 2 3588899887653322 222222333
Q ss_pred EEEeCCceeeeccCC-----CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECCCC
Q psy10114 602 ALAWNGDMLSSGSRD-----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLHSM 671 (819)
Q Consensus 602 sLawng~~LaSGS~D-----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~t~ 671 (819)
+...++..++.|+.+ ..+.++|..+.+......+......-..+.+ +++.++.|+.+ +.+.+||..+.
T Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 117 VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 445577777777754 3678899887654332222222222223333 56777777764 45889998765
Q ss_pred cee--EEEecCCCCEEEEEEcCCCCeEEEEEccCC---CCeEEEEECCCCceeEEEcC--CCCeEEEEEccCCCEEEEEE
Q psy10114 672 SPL--QTYTEHLAAVKAIAWSPHHHGLLASGGGTA---DRCIRFWNTLTGQPMQCVDT--GSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 672 ~~i--~t~~~h~~~VtsLafSPdg~~LLaSGgGs~---DgtIrIWDl~tg~~v~~l~~--~s~V~sLafSpdg~~Lasts 744 (819)
+=. ..+........++.+ +..+++.||... -..+.+||+.+++-...-.. ...-.+++. -++ .+++.+
T Consensus 195 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~i~v~G 269 (308)
T 1zgk_A 195 EWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQG-RIYVLG 269 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETT-EEEEEC
T ss_pred eEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECC-EEEEEc
Confidence 421 111111112222333 345777665211 25689999987654322111 111112222 234 444443
Q ss_pred ecC----CCeEEEEECCCCc
Q psy10114 745 GYS----QNQILVWKYPTLT 760 (819)
Q Consensus 745 Gss----Dg~I~IWDl~s~k 760 (819)
|.. ...+.+||..+.+
T Consensus 270 G~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTE
T ss_pred CcCCCcccceEEEEcCCCCE
Confidence 322 2457788876654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.029 Score=58.41 Aligned_cols=231 Identities=16% Similarity=0.154 Sum_probs=116.5
Q ss_pred CCEEEEEecC----ceEEEeecCCceEEEE--EecCCCCeEEEEeCCceeeeccCC-----CeEEEEECCCCCccceEEE
Q psy10114 567 GNLVAVGTHH----GYVQVWDVSVAKQVHK--LVGHTARVGALAWNGDMLSSGSRD-----RMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 567 G~~LAsGs~D----GtI~IWDl~tgk~i~t--l~gHs~~V~sLawng~~LaSGS~D-----GtI~IWDi~t~~~~~v~~l 635 (819)
+..++.|+.+ ..+..+|..+.+-... +......-..+..++..++.|+.+ ..+.++|..+.+......+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 3455555543 3578888877653322 111112223344577777888755 3588899887654333222
Q ss_pred ecccCCeEEEEECCCCCEEEEEECCC-----eEEEEECCCCceeEE--EecCCCCEEEEEEcCCCCeEEEEEccCC----
Q psy10114 636 VGHRQEVCGLKWSPDNQYLASGGNDN-----RLYVWNLHSMSPLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTA---- 704 (819)
Q Consensus 636 ~gH~~~VtsLafSpdg~~LaSGS~DG-----tI~IWDl~t~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~---- 704 (819)
...........+ +++.++.|+.++ .+.+||..+.+-... +........++.+ +..+++.||...
T Consensus 96 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 96 RDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQ 170 (302)
T ss_dssp SSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTTTE
T ss_pred CccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE---CCEEEEEeCCCCCCCc
Confidence 222222222333 567777787653 578889876542211 1111111122222 334666665211
Q ss_pred -CCeEEEEECCCCceeEEEcCC--CCeEEEEEccCCCEEEEEEecC----CCeEEEEECCCCcEEEEEecC-CCCEEEEE
Q psy10114 705 -DRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHGYS----QNQILVWKYPTLTQVAKLTGH-SYRVLYLA 776 (819)
Q Consensus 705 -DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg~~LastsGss----Dg~I~IWDl~s~k~l~sl~gH-~~~VtsLa 776 (819)
-..+.+||..+++-...-... ..-.+++. -++ .+++.+|.. .+.+.+||..+.+-.. +... ..+....+
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNN-LLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGV 247 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEE-ECC-EEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeE
Confidence 245889999877543322111 11112222 234 455443332 2468999987654332 2211 11111112
Q ss_pred EecCCCEEEEEeCCC-----cEEEEECCCCceec
Q psy10114 777 MSPDGEAIVTGAGDE-----TLRFWNVFSKVRSQ 805 (819)
Q Consensus 777 fSpDG~~LaSGS~DG-----tIrIWdl~s~~~~~ 805 (819)
..-+++.++.|+.++ .+.+||+.+.+-..
T Consensus 248 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 248 CAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred EEECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 223677777777654 48999998876543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.41 Score=54.84 Aligned_cols=233 Identities=10% Similarity=0.088 Sum_probs=130.0
Q ss_pred CeEEEEEC-CCeEEEEEcCCCceEEEEeccC-CCCCeEEEEE-------cCCCCEEEEEecCc-------eEEEeecCC-
Q psy10114 524 QNVLSVGL-GSCVYLWSACTSQVTRLCDLSA-DGNSVTSVAW-------NERGNLVAVGTHHG-------YVQVWDVSV- 586 (819)
Q Consensus 524 ~~LLa~g~-Dg~V~LWd~~tg~~~~l~~l~~-h~~~VtsLaf-------SpdG~~LAsGs~DG-------tI~IWDl~t- 586 (819)
++|..+.. .+.|++.|..++.+..+..... .......++| +++|+.|+++...+ .|.+.+...
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 44554444 4679999999988876654322 2346899999 99999777776554 266665333
Q ss_pred ceEE-----EEEecCCCCeEEEEeC---CceeeeccCCCeEEEEECC-------CCCc-----cc----eEE-E-ecccC
Q psy10114 587 AKQV-----HKLVGHTARVGALAWN---GDMLSSGSRDRMILQRDVR-------TPNS-----QS----ERR-L-VGHRQ 640 (819)
Q Consensus 587 gk~i-----~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IWDi~-------t~~~-----~~----v~~-l-~gH~~ 640 (819)
++.. ..+... .....++.+ +.++++-..++.|..+|+. ++.. .. ... . .+...
T Consensus 232 G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 232 GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 1111 122111 122345553 4456666778889999987 4432 00 111 1 12234
Q ss_pred CeEEEEECCCCCEEEEE-ECCCeEEEEECC--CCce--eEEEecC---C------------CCEE-EEEEc-------CC
Q psy10114 641 EVCGLKWSPDNQYLASG-GNDNRLYVWNLH--SMSP--LQTYTEH---L------------AAVK-AIAWS-------PH 692 (819)
Q Consensus 641 ~VtsLafSpdg~~LaSG-S~DGtI~IWDl~--t~~~--i~t~~~h---~------------~~Vt-sLafS-------Pd 692 (819)
....++|+|+|+.|..+ +..+.|+.+|.. .+.. ...+-+. . ..-. .++.. ++
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~ 390 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE 390 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCC
Confidence 46799999999964444 556788886643 3321 1222221 0 1233 34443 33
Q ss_pred CCeEEEEEccCCCCeEEEEECCCCceeEEEcCC------------------------CCeEEEEEccC-CCEEEEEEecC
Q psy10114 693 HHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG------------------------SQVCNLAWSKH-SSELVSTHGYS 747 (819)
Q Consensus 693 g~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~------------------------s~V~sLafSpd-g~~LastsGss 747 (819)
+ .++++-. ....|+.++ .+|........+ .....++++++ |...++ -..
T Consensus 391 g-~lyVaD~--~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVa--D~~ 464 (496)
T 3kya_A 391 Y-DFYFVDR--LNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVH--DQV 464 (496)
T ss_dssp E-EEEEEEG--GGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEE--ETT
T ss_pred C-eEEEEEC--CCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEE--eCC
Confidence 3 3555543 678999998 456433322210 23567888886 544444 456
Q ss_pred CCeEEEEECCCCcEEE
Q psy10114 748 QNQILVWKYPTLTQVA 763 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~ 763 (819)
+..|+.+++.....++
T Consensus 465 N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 465 GHTIRTISMEQEENVA 480 (496)
T ss_dssp TTEEEEEEECCCC---
T ss_pred CCEEEEEECCCCcccc
Confidence 6788888776554443
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0029 Score=75.42 Aligned_cols=226 Identities=14% Similarity=0.007 Sum_probs=131.6
Q ss_pred CceEEEeecCCceEEEEEecCCCCeEEEEeC--Cc-eeeeccCCCeEEEEECCCCC--ccceEEEecccCCeEEEEECCC
Q psy10114 576 HGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GD-MLSSGSRDRMILQRDVRTPN--SQSERRLVGHRQEVCGLKWSPD 650 (819)
Q Consensus 576 DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~-~LaSGS~DGtI~IWDi~t~~--~~~v~~l~gH~~~VtsLafSpd 650 (819)
.+.|+..++...+....+.. ...+..++|+ ++ ++++-...+.|+.+++.... ......+........++++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35677788776654433332 2345577784 33 44454566889999887511 0111111111233567888754
Q ss_pred C-CEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCe
Q psy10114 651 N-QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQV 728 (819)
Q Consensus 651 g-~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V 728 (819)
+ +++++-...+.|.+.|+........+.........++++|.+..++.+..+ ..+.|...++........+. .....
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 4 444554567889999987654433333333456788999987777775421 23678888775433222222 23446
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe--cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT--GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~--gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
..|++++++..|+.+ -...+.|..+++........+. +......++++..+ ..+++....+.|..++..+++...
T Consensus 543 nGlavd~~~~~LY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 543 NGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCEEECTTTCCEEEE-ETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred cEEEEeccCCEEEEE-ecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 789999988877775 3567889999986433322222 12233456666554 455555667899999987766543
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.27 Score=53.28 Aligned_cols=237 Identities=11% Similarity=0.098 Sum_probs=127.7
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-------cCCCCeEEEEeCC-----ceeeecc-C-------
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-------GHTARVGALAWNG-----DMLSSGS-R------- 615 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-------gHs~~V~sLawng-----~~LaSGS-~------- 615 (819)
.....|+|.|+|+.++++..+|.|++++.. ++....+. ........+++++ ..|..+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999999844566678999999853 33211111 1234567889863 3333332 1
Q ss_pred CCeEEEEECCCCCcc--ceEE-Eec------ccCCeEEEEECCCCCEEEEEEC-------------CCeEEEEECCCCc-
Q psy10114 616 DRMILQRDVRTPNSQ--SERR-LVG------HRQEVCGLKWSPDNQYLASGGN-------------DNRLYVWNLHSMS- 672 (819)
Q Consensus 616 DGtI~IWDi~t~~~~--~v~~-l~g------H~~~VtsLafSpdg~~LaSGS~-------------DGtI~IWDl~t~~- 672 (819)
...|..++....... .... +.. ....-..++|.|||.+.++.+. .|+|.-.|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666666543211 1111 111 1112357999999976555433 2467777765320
Q ss_pred -----------eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC-------------------------
Q psy10114 673 -----------PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG------------------------- 716 (819)
Q Consensus 673 -----------~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg------------------------- 716 (819)
....+.........++|+|....++++-.| .++.=.+.-+..+
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g-~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG-PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC-SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC-CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 111222122346789999944446555432 1211112111111
Q ss_pred ------ceeEEEcCCCCeEEEEEcc-------CCCEEEEEEecCCCeEEEEECCCCcEEEE--Ee-cCCCCEEEEEEecC
Q psy10114 717 ------QPMQCVDTGSQVCNLAWSK-------HSSELVSTHGYSQNQILVWKYPTLTQVAK--LT-GHSYRVLYLAMSPD 780 (819)
Q Consensus 717 ------~~v~~l~~~s~V~sLafSp-------dg~~LastsGssDg~I~IWDl~s~k~l~s--l~-gH~~~VtsLafSpD 780 (819)
.++..+........++|.. +|+.+++ ....+.|...++..++.+.. +- ....++..+++.||
T Consensus 256 ~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 256 IVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIG--ALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEE--ETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEE--EccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 1222333445677888864 4555555 56778888888876544432 21 23458999999999
Q ss_pred CCEEEEEe-CCCcEEEEEC
Q psy10114 781 GEAIVTGA-GDETLRFWNV 798 (819)
Q Consensus 781 G~~LaSGS-~DGtIrIWdl 798 (819)
|.+.++.. .+| +||.+
T Consensus 334 G~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 334 GYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp SCEEEEECSTTE--EEEEE
T ss_pred CcEEEEEeCCCC--EEEEE
Confidence 98666433 344 45554
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.25 Score=53.78 Aligned_cols=205 Identities=9% Similarity=0.107 Sum_probs=126.2
Q ss_pred ccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEE-Eec----CC--CCeEEEEe---CCc--eeeecc---
Q psy10114 551 LSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHK-LVG----HT--ARVGALAW---NGD--MLSSGS--- 614 (819)
Q Consensus 551 l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~t-l~g----Hs--~~V~sLaw---ng~--~LaSGS--- 614 (819)
+......-.+++|++....+..++ .+|+|..||...+..... +.+ .. ..+..+.| +++ ++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 334445556889988766777776 689999999976644333 222 11 14578899 433 444322
Q ss_pred ----------CCCeEEEEECC---CCCccceEEEeccc-----------CCeEEEEECCCCCEEEEEECC-CeEEEEECC
Q psy10114 615 ----------RDRMILQRDVR---TPNSQSERRLVGHR-----------QEVCGLKWSPDNQYLASGGND-NRLYVWNLH 669 (819)
Q Consensus 615 ----------~DGtI~IWDi~---t~~~~~v~~l~gH~-----------~~VtsLafSpdg~~LaSGS~D-GtI~IWDl~ 669 (819)
.++.+..+|+. +++......+.... ....+++..++|+..++++.. +.|...|..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 26789999998 65543333332221 247899999999999999988 888888865
Q ss_pred CCceeEEEe-c-----CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce--eEEE--c---CCCCeEEE-EEcc
Q psy10114 670 SMSPLQTYT-E-----HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP--MQCV--D---TGSQVCNL-AWSK 735 (819)
Q Consensus 670 t~~~i~t~~-~-----h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~--v~~l--~---~~s~V~sL-afSp 735 (819)
.. .+..+. . .....+.|+++|+|..|++.. .++.+..+|+.+... +..- . .......+ .--.
T Consensus 168 G~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 168 GK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---GPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp SC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---SSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred CC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEc---CCCeEEEEcCCCCcceeecccccCCcccccCccccccccc
Confidence 44 333221 1 122356899999999888764 389999999885322 2111 1 11233443 4445
Q ss_pred CCCEEEEEEecCCCeEEEEECCCCc
Q psy10114 736 HSSELVSTHGYSQNQILVWKYPTLT 760 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~s~k 760 (819)
+|+.++++ ....+.+.+.+....+
T Consensus 244 ~G~vllV~-~~~~~~~~l~S~DgW~ 267 (334)
T 2p9w_A 244 GNESVLVG-ARAPYAISFRSWDNWK 267 (334)
T ss_dssp TTEEEEEE-EETTEEEEEECSSTTS
T ss_pred CCEEEEEE-cCCCCEEEEECCCCcc
Confidence 77775654 3345556666654433
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.078 Score=55.66 Aligned_cols=181 Identities=11% Similarity=0.072 Sum_probs=97.7
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec----C-------ceEEEeecCCceEEEE--EecCCCC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH----H-------GYVQVWDVSVAKQVHK--LVGHTAR 599 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~----D-------GtI~IWDl~tgk~i~t--l~gHs~~ 599 (819)
+.+..+|..+++... ..+..........+...++..++.|+. + ..+.+||..+++-... +......
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence 689999999988764 444332233333344457888888873 1 1377889887654221 1111112
Q ss_pred eEEEEeCCceeeeccCC--------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-C-----CeEEE
Q psy10114 600 VGALAWNGDMLSSGSRD--------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-D-----NRLYV 665 (819)
Q Consensus 600 V~sLawng~~LaSGS~D--------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-D-----GtI~I 665 (819)
-.....++..++.|+.+ ..+.++|..+.+......+.........+. -+++.++.|+. + +.+.+
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~ 169 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCV 169 (315)
T ss_dssp CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEE
T ss_pred eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEE
Confidence 23344477777777742 458889988765433222222222222222 35667777776 2 46899
Q ss_pred EECCCCce--eEEEecCCCCEEEEEEcCCCCeEEEEEccCCC---CeEEEEECCCCcee
Q psy10114 666 WNLHSMSP--LQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD---RCIRFWNTLTGQPM 719 (819)
Q Consensus 666 WDl~t~~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D---gtIrIWDl~tg~~v 719 (819)
||..+.+= +..+........++.+ +..+++.||...+ ..+.+||..+++-.
T Consensus 170 yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 170 YDPKKFEWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred EeCCCCeEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 99876532 1111111111222222 3356776652222 25888999887543
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.69 E-value=1 Score=49.20 Aligned_cols=229 Identities=16% Similarity=0.197 Sum_probs=124.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE--EEE----ecCCCCeEEEEeCC-----ceeee---ccCCCeE
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV--HKL----VGHTARVGALAWNG-----DMLSS---GSRDRMI 619 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i--~tl----~gHs~~V~sLawng-----~~LaS---GS~DGtI 619 (819)
.-.....++|.|||+++++-...|.|.+++..+++.. ..+ .........|++++ ..|.. ...++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456789999999987766655899999987655432 222 12345678899954 23332 2345566
Q ss_pred EEEECCCCC--------ccce-EEEe-cccCCeEEEEECCCCCEEEEEEC-------------CCeEEEEECCCCc----
Q psy10114 620 LQRDVRTPN--------SQSE-RRLV-GHRQEVCGLKWSPDNQYLASGGN-------------DNRLYVWNLHSMS---- 672 (819)
Q Consensus 620 ~IWDi~t~~--------~~~v-~~l~-gH~~~VtsLafSpdg~~LaSGS~-------------DGtI~IWDl~t~~---- 672 (819)
.-+.....+ ...+ ..+. .....-..|.|.|||.+.++.+. .|.|.-.+....-
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 666665421 1111 1111 11123456999999987777542 3455555554220
Q ss_pred ---eeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc------------------eeEEEcCC-CCeE
Q psy10114 673 ---PLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ------------------PMQCVDTG-SQVC 729 (819)
Q Consensus 673 ---~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~------------------~v~~l~~~-s~V~ 729 (819)
....+. +|. ....++|+|+|. +.++-.| .|+.=.+--+..|. ++..+.+. ....
T Consensus 190 Pf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 190 PFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp SSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCCeEEeeCCC-CcceEEECCCCC-EEEEecC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 011122 343 346789999876 4444322 23211221112211 22333332 3566
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcE----EEEEecCCCCEEEEEEecCCCEEEEEe
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ----VAKLTGHSYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~----l~sl~gH~~~VtsLafSpDG~~LaSGS 788 (819)
.++|. +|..++. ....+.|....+..... ..-+.+..+++..++..|||.+.++.+
T Consensus 267 G~~~~-~g~~~~~--~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYA-EGSVWMA--GLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEE-TTEEEEE--ESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEE-cCceeec--cccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 77776 3444444 45566676666654322 222334457899999999998766543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.057 Score=56.61 Aligned_cols=232 Identities=14% Similarity=0.084 Sum_probs=116.9
Q ss_pred CCCCEEEEEecC----ceEEEeecCCceEEEE--EecCCCCeEEEEeCCceeeeccC----C-----CeEEEEECCCCCc
Q psy10114 565 ERGNLVAVGTHH----GYVQVWDVSVAKQVHK--LVGHTARVGALAWNGDMLSSGSR----D-----RMILQRDVRTPNS 629 (819)
Q Consensus 565 pdG~~LAsGs~D----GtI~IWDl~tgk~i~t--l~gHs~~V~sLawng~~LaSGS~----D-----GtI~IWDi~t~~~ 629 (819)
-++..++.|+.+ ..+.++|..+++-... +......-..+..++..++.|+. + ..+.++|..+.+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 345666666632 3578888877653332 11111122334457777777776 3 3578889887654
Q ss_pred cceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECCCCceeE--EEecCCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 630 QSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLHSMSPLQ--TYTEHLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~t~~~i~--t~~~h~~~VtsLafSPdg~~LLaSGgG 702 (819)
.....+.........+.+ +++.++.|+.+ +.+.+||..+.+-.. .+......-.++.+ +..+++.||.
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~ 177 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVGGF 177 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCB
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEeCC
Confidence 332222222222223333 56777777643 358889987654211 11111112222233 3456666652
Q ss_pred CC---CCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecC----CCeEEEEECCCCcEEEE--EecCCCC
Q psy10114 703 TA---DRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYS----QNQILVWKYPTLTQVAK--LTGHSYR 771 (819)
Q Consensus 703 s~---DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGss----Dg~I~IWDl~s~k~l~s--l~gH~~~ 771 (819)
.. -..+.+||..+.+-...-. ....-.+++.. ++ .+++.+|.. ...+.+||..+.+-... +......
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA 255 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CC-EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc
Confidence 11 2568899988765332211 11111122222 44 455543332 25689999876543321 1111111
Q ss_pred EEEEEEecCCCEEEEEeCC-----CcEEEEECCCCceec
Q psy10114 772 VLYLAMSPDGEAIVTGAGD-----ETLRFWNVFSKVRSQ 805 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~D-----GtIrIWdl~s~~~~~ 805 (819)
...+. -+++.++.|+.+ ..+.+||+.+.+-..
T Consensus 256 ~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 256 LGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp CEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred eEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 12222 267777777654 357889988776543
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.11 Score=56.55 Aligned_cols=158 Identities=11% Similarity=0.089 Sum_probs=105.4
Q ss_pred CeEEEEECCCCCEEEEEE-CCCeEEEEECCCCceeEEEecC-------CCCEEEEEE---cCCCCeEEEEEcc-------
Q psy10114 641 EVCGLKWSPDNQYLASGG-NDNRLYVWNLHSMSPLQTYTEH-------LAAVKAIAW---SPHHHGLLASGGG------- 702 (819)
Q Consensus 641 ~VtsLafSpdg~~LaSGS-~DGtI~IWDl~t~~~i~t~~~h-------~~~VtsLaf---SPdg~~LLaSGgG------- 702 (819)
--.+.+|++....+..++ ..++|..||...+......-.. ...+..+.| .|++..++++..+
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 345788988666666666 6899999999765443332111 113578999 6885544433210
Q ss_pred ---CCCCeEEEEECC---CCceeEEEcCC--------------CCeEEEEEccCCCEEEEEEecCC-CeEEEEECCCCcE
Q psy10114 703 ---TADRCIRFWNTL---TGQPMQCVDTG--------------SQVCNLAWSKHSSELVSTHGYSQ-NQILVWKYPTLTQ 761 (819)
Q Consensus 703 ---s~DgtIrIWDl~---tg~~v~~l~~~--------------s~V~sLafSpdg~~LastsGssD-g~I~IWDl~s~k~ 761 (819)
+.++.+..+|+. +++.+...+.. .....++..++|+..++ +... +.|...+.. ++.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt--~s~~~~~I~rV~pd-G~~ 170 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA--FALGMPAIARVSAD-GKT 170 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE--EEESSCEEEEECTT-SCC
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe--CCCCCCeEEEEeCC-CCE
Confidence 126789999999 88887666421 24789999999998887 4455 677666654 333
Q ss_pred EEEEe-c-----CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 762 VAKLT-G-----HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 762 l~sl~-g-----H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+..+. . .....+.++++|||+.|++...+|.|.-+|+...
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 33221 1 1123679999999999988877999999998843
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.14 Score=53.74 Aligned_cols=180 Identities=13% Similarity=0.109 Sum_probs=94.3
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec----Cc-------eEEEeecCCceEEEE--EecCCCC
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH----HG-------YVQVWDVSVAKQVHK--LVGHTAR 599 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~----DG-------tI~IWDl~tgk~i~t--l~gHs~~ 599 (819)
..+..||..+++... .............+...++..++.|+. ++ .+.++|..+++-... +......
T Consensus 24 ~~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 24 TAAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp SEEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred cceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 358899999988765 333322222233334557788888873 12 277888877654322 1111222
Q ss_pred eEEEEeCCceeeeccCC-------CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC------CCeEEEE
Q psy10114 600 VGALAWNGDMLSSGSRD-------RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN------DNRLYVW 666 (819)
Q Consensus 600 V~sLawng~~LaSGS~D-------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~------DGtI~IW 666 (819)
......++..++.|+.+ ..+.++|..+.+......+......-..+. .+++.++.|+. -+.+.+|
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEE
T ss_pred cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEE
Confidence 33444577777777754 357888888765432222111111112222 35667777764 2358999
Q ss_pred ECCCCceeEE--EecCCCCEEEEEEcCCCCeEEEEEccCCC---CeEEEEECCCCce
Q psy10114 667 NLHSMSPLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTAD---RCIRFWNTLTGQP 718 (819)
Q Consensus 667 Dl~t~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~D---gtIrIWDl~tg~~ 718 (819)
|..+.+=... .........++.+ +..+++.||...+ ..+.+||..+++-
T Consensus 181 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 181 NPKKGDWKDLAPMKTPRSMFGVAIH---KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred cCCCCEEEECCCCCCCcccceEEEE---CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 9887642111 1111111122222 3356666652222 3577899887653
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.42 Score=52.32 Aligned_cols=202 Identities=9% Similarity=0.097 Sum_probs=114.6
Q ss_pred cCceEEEeecCCc--eE-EEEEec-----CCCCeEEEEe----CCc-eeeec-c--CCCeEEEEECCCCCc--cceEEEe
Q psy10114 575 HHGYVQVWDVSVA--KQ-VHKLVG-----HTARVGALAW----NGD-MLSSG-S--RDRMILQRDVRTPNS--QSERRLV 636 (819)
Q Consensus 575 ~DGtI~IWDl~tg--k~-i~tl~g-----Hs~~V~sLaw----ng~-~LaSG-S--~DGtI~IWDi~t~~~--~~v~~l~ 636 (819)
.+|.|.++|.++. +. .-.+.+ ..-....+.+ ++. +|+++ . .+.+|.+|+++.... .....+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998732 21 112223 1235566666 233 33333 2 256777877765432 2222333
Q ss_pred cc-cCCeEEEEECCCCCEEEEEE-----------------CCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 637 GH-RQEVCGLKWSPDNQYLASGG-----------------NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 637 gH-~~~VtsLafSpdg~~LaSGS-----------------~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
+. -...+++.+.++|+..++.. ..|.|.-+|. ++ +......-..-+.++|+||++.+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEE
Confidence 22 23578899999998777654 1245666665 33 2333333455689999999999988
Q ss_pred EEccCCCCeEEEEECCC-Cce--eEEEcCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECC--CCcEEEEEec---CC
Q psy10114 699 SGGGTADRCIRFWNTLT-GQP--MQCVDTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYP--TLTQVAKLTG---HS 769 (819)
Q Consensus 699 SGgGs~DgtIrIWDl~t-g~~--v~~l~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~--s~k~l~sl~g---H~ 769 (819)
+.+ ..+.|..||+.. ++. ...+........++..+ +|+..+++. ...++|..|+-. .+..+..++. -.
T Consensus 238 adt--~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~-~~g~~v~~~~P~~~~~s~v~rI~~~~~~~ 314 (355)
T 3sre_A 238 AEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH-PNGMRIFFYDAENPPGSEVLRIQDILSEE 314 (355)
T ss_dssp EEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE-SCHHHHHSCCTTSCCCEEEEEEECTTSSS
T ss_pred EeC--CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec-CCceEEEEECCCCCCCCEEEEEEccCCCC
Confidence 865 678999999863 332 22344456678899999 588777542 122334434322 2555555542 22
Q ss_pred CCEEEEEEecCCCE
Q psy10114 770 YRVLYLAMSPDGEA 783 (819)
Q Consensus 770 ~~VtsLafSpDG~~ 783 (819)
..+..+ |..||+.
T Consensus 315 ~~v~~v-~~ddG~~ 327 (355)
T 3sre_A 315 PKVTVV-YAENGTV 327 (355)
T ss_dssp CEEEEE-EEECSSS
T ss_pred cEEEEE-EEcCCCE
Confidence 334433 4446653
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=96.36 E-value=2.5 Score=49.93 Aligned_cols=263 Identities=11% Similarity=0.068 Sum_probs=147.6
Q ss_pred EEEEEec-CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 516 LNLVDWS-SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 516 v~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
+.++.-+ .+.+..++. +.+..+|..+.+... ........|.++.. .+| .|.+|+.+| +..+|..+++.. .+.
T Consensus 65 i~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~G-l~~~~~~~~~~~-~~~ 137 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTD-NGILVYNYRADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALNG-LYTYQLQSRKLT-SFD 137 (758)
T ss_dssp EEEEEEETTTEEEEEET-TEEEEEETTTTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETTE-EEEEETTTCCEE-EEC
T ss_pred EEEEEEcCCCcEEEEeC-CCeEEEeCCCCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCCc-ceeEeCCCCeEE-Eec
Confidence 4444334 456666664 568899988775432 11112345777764 344 677777764 778888765543 331
Q ss_pred -----cCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEec----ccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 595 -----GHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVG----HRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 595 -----gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~g----H~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
.....|.++..+ ...+..|+.+| +..+|..+..... ..... ....|.++....++..|..|+. +-+.
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~ 214 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLF 214 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEE
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCe
Confidence 123568888775 44555566554 6677776543211 11111 1224888888777776666664 4688
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--------CCCCeEEEEEccC
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--------TGSQVCNLAWSKH 736 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--------~~s~V~sLafSpd 736 (819)
.+|..+++...........|.++....+|...+.+ ++-+.++|..+++...... ....|.++....+
T Consensus 215 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-----~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 215 QYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-----DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-----TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT
T ss_pred EEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-----CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC
Confidence 89987765322111123458888888888755543 3457788877665432211 1235888888887
Q ss_pred CCEEEEEEecCCCeEEEEECCCCcEEEEEe-----cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 737 SSELVSTHGYSQNQILVWKYPTLTQVAKLT-----GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 737 g~~LastsGssDg~I~IWDl~s~k~l~sl~-----gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
|..-+. ...| +.+......-...... .....|.++.-..+|..-+ |+.+| +..++..
T Consensus 290 g~lWiG---T~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~ 351 (758)
T 3ott_A 290 HNIWLG---TDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDP 351 (758)
T ss_dssp CCEEEE---ESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCT
T ss_pred CCEEEE---eCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeeccc
Confidence 776554 3345 5444332211111110 1134688888888887555 45554 5555544
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.89 Score=51.32 Aligned_cols=195 Identities=13% Similarity=0.175 Sum_probs=129.0
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCC-CceEEEEeccC--CCCCeEEEEEcCCCCEEEEEe-------cCceEEEeecC
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACT-SQVTRLCDLSA--DGNSVTSVAWNERGNLVAVGT-------HHGYVQVWDVS 585 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~--h~~~VtsLafSpdG~~LAsGs-------~DGtI~IWDl~ 585 (819)
+.-..|-+...++-=.+..|+-|+..+ ....++.+... .+..|..-.-++++++++..+ -.|.+++|..+
T Consensus 108 VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 187 (494)
T 1bpo_A 108 VTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (494)
T ss_dssp CCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST
T ss_pred ceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc
Confidence 445678777777777889999999964 34455544322 245677888899999887543 24789999987
Q ss_pred CceEEEEEecCCCCeEEEEeCCc-----eeeeccC---CCeEEEEECCCC-Cc--cc-eEEE------ecccCCeEEEEE
Q psy10114 586 VAKQVHKLVGHTARVGALAWNGD-----MLSSGSR---DRMILQRDVRTP-NS--QS-ERRL------VGHRQEVCGLKW 647 (819)
Q Consensus 586 tgk~i~tl~gHs~~V~sLawng~-----~LaSGS~---DGtI~IWDi~t~-~~--~~-v~~l------~gH~~~VtsLaf 647 (819)
.+ .-+.++||.+....+..+|+ .++.+.+ .+.+.+.++... .. .. .+.. ..-.+--.++..
T Consensus 188 r~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqv 266 (494)
T 1bpo_A 188 RK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI 266 (494)
T ss_dssp TC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEE
T ss_pred cc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEe
Confidence 54 45667888877777766543 3333333 378999998654 11 11 1111 112344567888
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECC
Q psy10114 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTL 714 (819)
Q Consensus 648 Spdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~ 714 (819)
|+.-..+..-+.-|.|.++|++++.++..-+-....|-.-+-+.....+++.. .+|.|.-..++
T Consensus 267 s~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vn---r~GqVl~v~v~ 330 (494)
T 1bpo_A 267 SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN---RKGQVLSVCVE 330 (494)
T ss_dssp ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE---TTCEEEEEEEC
T ss_pred cccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEc---cCceEEEEEEc
Confidence 88888899999999999999999999888776666666555555555555543 45555444443
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.23 Score=52.07 Aligned_cols=226 Identities=12% Similarity=0.100 Sum_probs=109.5
Q ss_pred EEEEEecCceEEEeecCCceEEE-EEecCCCC-eEEEEe-CCceeeeccC----CC-------eEEEEECCCCCccceEE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVH-KLVGHTAR-VGALAW-NGDMLSSGSR----DR-------MILQRDVRTPNSQSERR 634 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~-tl~gHs~~-V~sLaw-ng~~LaSGS~----DG-------tI~IWDi~t~~~~~v~~ 634 (819)
.++.|+. .+..||..+++-.. .+.....+ -.+++. ++..++.|+. ++ .+..+|..+.+......
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 37889998876544 22211122 223333 6667777773 12 27788887765433222
Q ss_pred EecccCCeEEEEECCCCCEEEEEECC-------CeEEEEECCCCceeEE--EecCCCCEEEEEEcCCCCeEEEEEccC--
Q psy10114 635 LVGHRQEVCGLKWSPDNQYLASGGND-------NRLYVWNLHSMSPLQT--YTEHLAAVKAIAWSPHHHGLLASGGGT-- 703 (819)
Q Consensus 635 l~gH~~~VtsLafSpdg~~LaSGS~D-------GtI~IWDl~t~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs-- 703 (819)
+...........+ +++.++.|+.+ +.+.+||..+.+=... +......-.++. - +..+++.||..
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~ 170 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--H-NGMIYCLGGKTDD 170 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--E-TTEEEEECCEESS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--E-CCEEEEEcCCCCC
Confidence 2221222222223 56777777754 3588889876542211 111001111222 2 34466666421
Q ss_pred --CCCeEEEEECCCCceeEEEcCC--CCeEEEEEccCCCEEEEEEecCC----CeEEEEECCCCcEEE--EEecCCCCEE
Q psy10114 704 --ADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHGYSQ----NQILVWKYPTLTQVA--KLTGHSYRVL 773 (819)
Q Consensus 704 --~DgtIrIWDl~tg~~v~~l~~~--s~V~sLafSpdg~~LastsGssD----g~I~IWDl~s~k~l~--sl~gH~~~Vt 773 (819)
.-..+.+||..+++-...-... ..-.+++. -++ .+++.+|..+ +.+.+||..+.+-.. .+........
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 248 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSIS 248 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCE
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceE
Confidence 1346899999887543322111 11112222 234 4555444332 357788987654322 1111111112
Q ss_pred EEEEecCCCEEEEEeCC--------------CcEEEEECCCCceec
Q psy10114 774 YLAMSPDGEAIVTGAGD--------------ETLRFWNVFSKVRSQ 805 (819)
Q Consensus 774 sLafSpDG~~LaSGS~D--------------GtIrIWdl~s~~~~~ 805 (819)
.+ .-+++.++.|+.+ ..+.+||+.+.+-..
T Consensus 249 ~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 249 LV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred EE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 22 2366777777654 357888988776543
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.25 Score=62.78 Aligned_cols=259 Identities=12% Similarity=0.085 Sum_probs=153.9
Q ss_pred ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCc
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGD 608 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~ 608 (819)
+.+.+|.|.|+.++........ ..-+.-.+|..+.+|.-. ..+++|+|+++...++...- ...|.--.| +.+
T Consensus 45 ~~~~~vvIidl~~~~~~~rrpi-----~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~ 117 (1630)
T 1xi4_A 45 GEQAQVVIIDMNDPSNPIRRPI-----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN 117 (1630)
T ss_pred CCCceEEEEECCCCCCcccccc-----cchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC
Confidence 3445788888877654321112 123455678888777765 67899999998888777664 345667777 666
Q ss_pred eeeeccCCCeEEEEECCCCCccceEEEecc----cCCeEEEEECCCCCEEEEEE-------CCCeEEEEECCCCceeEEE
Q psy10114 609 MLSSGSRDRMILQRDVRTPNSQSERRLVGH----RQEVCGLKWSPDNQYLASGG-------NDNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 609 ~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH----~~~VtsLafSpdg~~LaSGS-------~DGtI~IWDl~t~~~i~t~ 677 (819)
.|+-.+ +..|..|++.... .+++.+..| ...|..-..+++.++++..| -.|.+.+|..+.+. .+.+
T Consensus 118 ~l~lVT-~~aVyHW~~~~~s-~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~i 194 (1630)
T 1xi4_A 118 TVALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI 194 (1630)
T ss_pred eeEEEc-CCeEEEeccCCCC-ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhh
Confidence 665544 4579999997532 333444444 46788888899999876544 24678888876543 3456
Q ss_pred ecCCCCEEEEEEc--CCCCeEEEEEc-cCCCCeEEEEECCCC---ce-eE----EE--cC---CCCeEEEEEccCCCEEE
Q psy10114 678 TEHLAAVKAIAWS--PHHHGLLASGG-GTADRCIRFWNTLTG---QP-MQ----CV--DT---GSQVCNLAWSKHSSELV 741 (819)
Q Consensus 678 ~~h~~~VtsLafS--Pdg~~LLaSGg-Gs~DgtIrIWDl~tg---~~-v~----~l--~~---~s~V~sLafSpdg~~La 741 (819)
.+|.+....+... +....+++-+. ....+.+++-++... .+ .. .+ .. ..-..++..|+....++
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 6676555444432 22233444332 112368888887542 11 10 01 11 22245667777777777
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 742 STHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 742 stsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
.+ ..-|.|.++|+.++..+..-+-....|...+-+....-++.....|.|.--.+..
T Consensus 275 ~i--tk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 275 LI--TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred EE--ecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 63 4789999999999988765554444554444333322233334556555554443
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.65 Score=49.42 Aligned_cols=165 Identities=10% Similarity=0.009 Sum_probs=98.3
Q ss_pred CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE----CCCeEEEEECCCCceeEEEecCCCCEEEEEEcC
Q psy10114 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG----NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691 (819)
Q Consensus 616 DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS----~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSP 691 (819)
+..|+..++...+.. .+... . +..|+++++.|+-.. .+..|..-++... ....+..+.. .++++
T Consensus 87 ~~~Iy~i~~dg~~~~---~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~ 154 (302)
T 3s25_A 87 RNSLCRIKRNGHGST---VLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNT 154 (302)
T ss_dssp SEEEEEEETTSCCCE---EEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEE
T ss_pred CCeEEEEeCCCCcce---EeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeE
Confidence 356777777765532 22221 1 236777888888776 3345666676543 3445544433 45688
Q ss_pred CCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC
Q psy10114 692 HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 692 dg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~ 771 (819)
+++.++.+.. ....|..-++..+.....+. .... ..++|+++.++-+.......|..-++..... ..+. ...
T Consensus 155 ~g~~iy~t~~--g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~~~ 226 (302)
T 3s25_A 155 SDRYFYYNNP--KNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT--EAN 226 (302)
T ss_dssp ETTEEEEECT--TTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS--CSC
T ss_pred ECCEEEEEeC--CCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe--CCC
Confidence 8998888753 46789999987766544333 2222 3466999999886544345677777654432 3333 223
Q ss_pred EEEEEEecCCCEEEEEeC--CCcEEEEECCCCc
Q psy10114 772 VLYLAMSPDGEAIVTGAG--DETLRFWNVFSKV 802 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~--DGtIrIWdl~s~~ 802 (819)
+ ..|+|+|+.|.-++. .+.|..-+++...
T Consensus 227 ~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 227 I--EHYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp E--EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred c--ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 3 347778888876532 3566666665543
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.2 Score=52.50 Aligned_cols=150 Identities=13% Similarity=0.047 Sum_probs=85.4
Q ss_pred EEecCCeEEEEEC-----C------CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC--------ceE
Q psy10114 519 VDWSSQNVLSVGL-----G------SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH--------GYV 579 (819)
Q Consensus 519 ldwS~~~LLa~g~-----D------g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D--------GtI 579 (819)
+..++..++.||. + ..+..+|..+++...+..+.........+.+ ++..++.|+.+ ..+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceE
Confidence 3345556666763 1 2378899998887665444322222222333 56677777642 458
Q ss_pred EEeecCCceEEE--EEecCCCCeEEEEeCCceeeeccC-C-----CeEEEEECCCCCccceEEEecccCCeEEEEECCCC
Q psy10114 580 QVWDVSVAKQVH--KLVGHTARVGALAWNGDMLSSGSR-D-----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 580 ~IWDl~tgk~i~--tl~gHs~~V~sLawng~~LaSGS~-D-----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg 651 (819)
.+||..+++-.. .+......-.++..++..++.|+. + ..+.++|..+.+...+..+........++.+ ++
T Consensus 120 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~ 197 (315)
T 4asc_A 120 MCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DG 197 (315)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT
T ss_pred EEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CC
Confidence 899988765322 222222233344567777777776 2 4688999887654333222222222223333 66
Q ss_pred CEEEEEECCC-----eEEEEECCCCc
Q psy10114 652 QYLASGGNDN-----RLYVWNLHSMS 672 (819)
Q Consensus 652 ~~LaSGS~DG-----tI~IWDl~t~~ 672 (819)
+.++.|+.++ .+.+||..+.+
T Consensus 198 ~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 198 RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEEeccCCCCccceEEEEECCCCe
Confidence 7778887654 58889987764
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=95.80 E-value=2.5 Score=44.92 Aligned_cols=247 Identities=11% Similarity=0.048 Sum_probs=141.4
Q ss_pred ecCCeEEEEE--CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC--------------ceEEEeec
Q psy10114 521 WSSQNVLSVG--LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH--------------GYVQVWDV 584 (819)
Q Consensus 521 wS~~~LLa~g--~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D--------------GtI~IWDl 584 (819)
.+++.+.... .++.|+..+.......++.. +. +--++++|++|+-.... +.|+..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-----~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-----DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-----EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccC-----Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 3566655554 25678888877766666543 12 33457888888877543 46777777
Q ss_pred CCceEEEEEecCCCCeEEEEeCCceeeecc----CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-
Q psy10114 585 SVAKQVHKLVGHTARVGALAWNGDMLSSGS----RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN- 659 (819)
Q Consensus 585 ~tgk~i~tl~gHs~~V~sLawng~~LaSGS----~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~- 659 (819)
+.++... +. ......++.+++.|+-.. .+..|...++...+. ..+..+.. ..++++++.|+-.+.
T Consensus 96 dg~~~~~-l~--~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~---~~lt~~~~----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 96 NGHGSTV-LD--PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK---KKIKNHYL----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp TSCCCEE-EE--CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC---EEEESSCC----CCSEEETTEEEEECTT
T ss_pred CCCcceE-ee--cCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe---EEEeCCCc----eEeeEECCEEEEEeCC
Confidence 6665333 22 123335666777666543 445666666665332 33443332 346778888876655
Q ss_pred CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCE
Q psy10114 660 DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSE 739 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~ 739 (819)
..+|.+-++..+.....+.+ ... ..++|++..++.+..+ ....|..-++..+.. ..+. ...+ ..|+|+++.
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~-~~~~I~~~~ldG~~~-~~Lt-~~~~--~~~~~~g~~ 236 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVN-RDNAIVHVNINNPNP-VVLT-EANI--EHYNVYGSL 236 (302)
T ss_dssp TCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGG-GTTEEEEECSSSCCC-EECS-CSCE--EEEEEETTE
T ss_pred CceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcC-CCcEEEEEECCCCCe-EEEe-CCCc--ceEEECCCE
Confidence 56888888876654433332 222 3466999988887641 225677777766553 3332 2333 347889999
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEe-CCCcEEEEEC
Q psy10114 740 LVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRFWNV 798 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl 798 (819)
|+.+.....+.|..-++..........+ .+.+ +++.+.+|+-.. ..+.|..-++
T Consensus 237 Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~--i~i~~d~Iy~td~~~~~i~~~~~ 291 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDGTGFKELAKG---EFCN--INVTSQYVYFTDFVSNKEYCTST 291 (302)
T ss_dssp EEEEECSSSCEEEEEETTSCCCEEEEES---CEEE--EEECSSEEEEEETTTCCEEEEES
T ss_pred EEEEECCCCcEEEEEECCCCccEEeeCC---ccce--EEEeCCEEEEEECCCCeEEEEEC
Confidence 9875333456777777754333222222 2443 444666666554 3455544444
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.18 Score=53.65 Aligned_cols=236 Identities=8% Similarity=-0.025 Sum_probs=111.3
Q ss_pred CCCEEEEEec-CceEEEeecCC--ce--EEEEEe-cCCCCeEEEEeCCceeeeccC-C---------CeEEEEECCCCCc
Q psy10114 566 RGNLVAVGTH-HGYVQVWDVSV--AK--QVHKLV-GHTARVGALAWNGDMLSSGSR-D---------RMILQRDVRTPNS 629 (819)
Q Consensus 566 dG~~LAsGs~-DGtI~IWDl~t--gk--~i~tl~-gHs~~V~sLawng~~LaSGS~-D---------GtI~IWDi~t~~~ 629 (819)
++.+++.|+. ...+.++|..+ .+ .+..+. .....-.++..++.+++.|+. + ..+.++|..+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 4445555543 24577788763 22 121222 112223344457777777776 2 4688899988664
Q ss_pred cceEEEe-cccCCeEEEEECCCCCEEEEEECC---------------------------------------CeEEEEECC
Q psy10114 630 QSERRLV-GHRQEVCGLKWSPDNQYLASGGND---------------------------------------NRLYVWNLH 669 (819)
Q Consensus 630 ~~v~~l~-gH~~~VtsLafSpdg~~LaSGS~D---------------------------------------GtI~IWDl~ 669 (819)
..+..+. .......++. .+++.++.|+.+ +.+.+||..
T Consensus 99 ~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred EECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 3332222 1112222222 467778888764 578999987
Q ss_pred CCce--eEEEecCCCCEEEEEEcCCCCeEEEEEccC----CCCeEEEEEC--CCCceeEE--EcCCCC-eEEEEEccCCC
Q psy10114 670 SMSP--LQTYTEHLAAVKAIAWSPHHHGLLASGGGT----ADRCIRFWNT--LTGQPMQC--VDTGSQ-VCNLAWSKHSS 738 (819)
Q Consensus 670 t~~~--i~t~~~h~~~VtsLafSPdg~~LLaSGgGs----~DgtIrIWDl--~tg~~v~~--l~~~s~-V~sLafSpdg~ 738 (819)
+.+= +..+......-.+++.. +..+++.||.. ....+..+|+ .+.+-... ...... ....+...+++
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 254 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS 254 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTE
T ss_pred CCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCE
Confidence 7642 22221111110122222 34466666411 1345777877 43332211 111111 11112223444
Q ss_pred EEEEEEecCC---------------------CeEEEEECCCCc--EEEEEecCCCCEEEEEEecCCCEEEEEeCCC----
Q psy10114 739 ELVSTHGYSQ---------------------NQILVWKYPTLT--QVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE---- 791 (819)
Q Consensus 739 ~LastsGssD---------------------g~I~IWDl~s~k--~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG---- 791 (819)
+++.+|... ..+.+||..+.+ .+..+...... ..+..-+++.++.|+.++
T Consensus 255 -iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~ 331 (357)
T 2uvk_A 255 -LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKA 331 (357)
T ss_dssp -EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCE
T ss_pred -EEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCE
Confidence 444434211 257789987543 44333322222 222334778888888653
Q ss_pred --cEEEEECCCCceecccc
Q psy10114 792 --TLRFWNVFSKVRSQRES 808 (819)
Q Consensus 792 --tIrIWdl~s~~~~~k~~ 808 (819)
.|.+.++++++..+..+
T Consensus 332 ~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC-
T ss_pred eeeEEEEEEcCcEeEeeec
Confidence 35566888877665543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.69 E-value=2.9 Score=44.94 Aligned_cols=218 Identities=13% Similarity=0.141 Sum_probs=115.7
Q ss_pred EEEecCC-eEEEEECCCeEEEEEcCCCceEEEEecc---CCCCCeEEEEEcCC---CCEEEEEec-C-----ceEEEeec
Q psy10114 518 LVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCDLS---ADGNSVTSVAWNER---GNLVAVGTH-H-----GYVQVWDV 584 (819)
Q Consensus 518 ~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~l~---~h~~~VtsLafSpd---G~~LAsGs~-D-----GtI~IWDl 584 (819)
.+.|+++ .++.+..++.|++++ +++...+..+. ........++++|+ +..|.++.. + +.|..++.
T Consensus 35 ~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 35 ALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 4555543 477777889999998 45544433332 22457899999998 555555543 2 67888887
Q ss_pred CCce-----EE-EEEe---cCCCCeEEEEe--CCceeeeccC-------------CCeEEEEECCCCC-----------c
Q psy10114 585 SVAK-----QV-HKLV---GHTARVGALAW--NGDMLSSGSR-------------DRMILQRDVRTPN-----------S 629 (819)
Q Consensus 585 ~tgk-----~i-~tl~---gHs~~V~sLaw--ng~~LaSGS~-------------DGtI~IWDi~t~~-----------~ 629 (819)
..++ .+ ..+. +.......++| +|.+.++.+. .|.|.-+|.+..- .
T Consensus 113 ~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~ 192 (352)
T 2ism_A 113 LGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGA 192 (352)
T ss_dssp CSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTS
T ss_pred CCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCC
Confidence 6431 11 2233 11112347788 4554444321 2566666665310 0
Q ss_pred cceEEEecccCCeEEEEECC-CCCEEEEEECCCe--------EEEEECCC----------------CceeEEEecCCCCE
Q psy10114 630 QSERRLVGHRQEVCGLKWSP-DNQYLASGGNDNR--------LYVWNLHS----------------MSPLQTYTEHLAAV 684 (819)
Q Consensus 630 ~~v~~l~gH~~~VtsLafSp-dg~~LaSGS~DGt--------I~IWDl~t----------------~~~i~t~~~h~~~V 684 (819)
.......++ ....+++|+| +++.+++-...+. |.+..... ..++..+. +....
T Consensus 193 ~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap 270 (352)
T 2ism_A 193 RPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPP 270 (352)
T ss_dssp CTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCE
T ss_pred CccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CCCCC
Confidence 111222233 2356889999 6665555433332 33332111 11333332 23345
Q ss_pred EEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-------eEEEcCCCCeEEEEEccCCCEEEEE
Q psy10114 685 KAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-------MQCVDTGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 685 tsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-------v~~l~~~s~V~sLafSpdg~~Last 743 (819)
..++| .+|. ++++.- ..+.|...++..... ...+.....+..+++.|||...++.
T Consensus 271 ~G~~~-~~G~-l~v~~~--~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 271 GNLAF-FRGD-LYVAGL--RGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp EEEEE-ETTE-EEEEET--TTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred cceEE-ECCE-EEEEEC--CCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 67777 3454 444432 567787777664321 1122334678999999999766663
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.64 E-value=4 Score=47.36 Aligned_cols=271 Identities=13% Similarity=0.103 Sum_probs=155.2
Q ss_pred ceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEe-ccCC----------------------CCCe
Q psy10114 502 FKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCD-LSAD----------------------GNSV 558 (819)
Q Consensus 502 ~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~-l~~h----------------------~~~V 558 (819)
.++.-+|.-.|+||. +.+||..|.|+|+-+.+++..+..- +... .+..
T Consensus 58 ~k~~v~pG~~Deyy~---------f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~ 128 (638)
T 3sbq_A 58 QKIHVGPGELDDYYG---------FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDC 128 (638)
T ss_dssp CCCCCCTTCCCSEEE---------EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCC
T ss_pred cccccCCCCcccEEE---------EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCc
Confidence 344456766666664 4567788888888888776544311 1100 1111
Q ss_pred E--EEEEcC---CCCEEEEEec-CceEEEeecCCceEEEEEe-cCCCCeEEEEe----CCceeeeccC-------CCeE-
Q psy10114 559 T--SVAWNE---RGNLVAVGTH-HGYVQVWDVSVAKQVHKLV-GHTARVGALAW----NGDMLSSGSR-------DRMI- 619 (819)
Q Consensus 559 t--sLafSp---dG~~LAsGs~-DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw----ng~~LaSGS~-------DGtI- 619 (819)
. .+++.. ||++|++-.. +..|...+++..++-+.+. .....+..++| +-.+++.+++ ||..
T Consensus 129 HHp~~S~tdg~yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~ 208 (638)
T 3sbq_A 129 HHPHISMTDGKYDGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVF 208 (638)
T ss_dssp CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred CCCcccccCCeeeeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCccc
Confidence 1 233332 6788888774 6778888888887766665 34556777776 2335555443 2221
Q ss_pred -----------EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC---------------eEEEEE------
Q psy10114 620 -----------LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN---------------RLYVWN------ 667 (819)
Q Consensus 620 -----------~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG---------------tI~IWD------ 667 (819)
...|..+.+... +... .+........++|++.++.+... -+.++|
T Consensus 209 ~~~~~~~y~~f~~iD~~tm~v~~-Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~ 285 (638)
T 3sbq_A 209 DLQDENSYTMYNAIDAETMEMAF-QVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEA 285 (638)
T ss_dssp CTTSTTEEEEEEEEETTTCSEEE-EEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHH
T ss_pred ccCChhhceEEEEEcCCccEEEE-EEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHH
Confidence 111222111100 0000 12233345567777777765321 244444
Q ss_pred -------------------CCC----CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC------ce
Q psy10114 668 -------------------LHS----MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG------QP 718 (819)
Q Consensus 668 -------------------l~t----~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg------~~ 718 (819)
.+. +..+..+-.-....-.+..+|||++++++|. .+.++.++|++.- +.
T Consensus 286 ~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GK--LsptvtV~d~~k~~~~~~~k~ 363 (638)
T 3sbq_A 286 AVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGK--LSPTCSMIAIDKLPDLFAGKL 363 (638)
T ss_dssp HHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHHTTCC
T ss_pred HHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCC--CCCeEEEEEeehhhhhhhccc
Confidence 332 1111111111223346788999999999875 8899999998741 11
Q ss_pred -------eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC----------cEEEEEecCCCCEEEEEE----
Q psy10114 719 -------MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL----------TQVAKLTGHSYRVLYLAM---- 777 (819)
Q Consensus 719 -------v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~----------k~l~sl~gH~~~VtsLaf---- 777 (819)
+.....+......+|.++| ..++ +-.-|.+|..|++... ..+..+..|-. +-.+.-
T Consensus 364 ~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYT-tlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~ge 440 (638)
T 3sbq_A 364 ADPRDVIVGEPELGLGPLHTTFDGRG-NAYT-TLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCE 440 (638)
T ss_dssp SCGGGGEEECCBCCSCEEEEEECSSS-EEEE-EETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTT
T ss_pred cCcccceEeeccCCCcccEEEECCCC-ceEe-eeeecceEEEEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCc
Confidence 3444567788999999999 3433 3788999999998643 34556665543 344433
Q ss_pred --ecCCCEEEEEeC
Q psy10114 778 --SPDGEAIVTGAG 789 (819)
Q Consensus 778 --SpDG~~LaSGS~ 789 (819)
.+||++|++...
T Consensus 441 t~~~dGk~lv~lnK 454 (638)
T 3sbq_A 441 TNEADGKWLVALSK 454 (638)
T ss_dssp STTCCSCEEEEEES
T ss_pred cCCCCccEEEEecc
Confidence 568999988753
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=1.3 Score=48.37 Aligned_cols=171 Identities=17% Similarity=0.173 Sum_probs=101.4
Q ss_pred CCCeEEEEECCCCCcc-ceEEEec-----ccCCeEEEEECC--CCC-EEEEE-EC--CCeEEEEECCCCc----eeEEEe
Q psy10114 615 RDRMILQRDVRTPNSQ-SERRLVG-----HRQEVCGLKWSP--DNQ-YLASG-GN--DNRLYVWNLHSMS----PLQTYT 678 (819)
Q Consensus 615 ~DGtI~IWDi~t~~~~-~v~~l~g-----H~~~VtsLafSp--dg~-~LaSG-S~--DGtI~IWDl~t~~----~i~t~~ 678 (819)
.+|.|.++|..+.... ....+.+ ......++.+.+ +++ +|+++ .. +.+|.+|++.... .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998753221 1122222 234677888755 454 34443 33 4577887765432 223333
Q ss_pred cC-CCCEEEEEEcCCCCeEEEEEcc---------------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEE
Q psy10114 679 EH-LAAVKAIAWSPHHHGLLASGGG---------------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 679 ~h-~~~VtsLafSPdg~~LLaSGgG---------------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Las 742 (819)
+. -...+++++.++|... ++... ...+.|..+|. ++.....+.-...+.++|+||++.+++
T Consensus 161 g~~~~~pND~~v~~~G~fy-vt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFY-ATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEE-EEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEE-ecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEE
Confidence 32 3457899999998744 33321 11245555554 333222333356789999999999988
Q ss_pred EEecCCCeEEEEECCC-CcE--EEEEecCCCCEEEEEEec-CCCEEEEEeCC
Q psy10114 743 THGYSQNQILVWKYPT-LTQ--VAKLTGHSYRVLYLAMSP-DGEAIVTGAGD 790 (819)
Q Consensus 743 tsGssDg~I~IWDl~s-~k~--l~sl~gH~~~VtsLafSp-DG~~LaSGS~D 790 (819)
+ .+..+.|..|++.. ++. ...+ ...+..-.+++.+ +|++.+++..+
T Consensus 238 a-dt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 238 A-ELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp E-EGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred E-eCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 6 44578999999863 322 2233 2345678899999 59887766533
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.41 E-value=0.26 Score=58.57 Aligned_cols=197 Identities=14% Similarity=0.149 Sum_probs=109.3
Q ss_pred ecCCeEEEEECC----CeEEEEEcCCCceEEEE-e-----ccCCCCCeEEEEEcCCCCEEEEEecCc------eEEEeec
Q psy10114 521 WSSQNVLSVGLG----SCVYLWSACTSQVTRLC-D-----LSADGNSVTSVAWNERGNLVAVGTHHG------YVQVWDV 584 (819)
Q Consensus 521 wS~~~LLa~g~D----g~V~LWd~~tg~~~~l~-~-----l~~h~~~VtsLafSpdG~~LAsGs~DG------tI~IWDl 584 (819)
.++..++.||.+ +.+.++|..+++...+. . .......-.++.+..+++.++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 344555666643 46899999998887765 3 222222233344433677888887543 5788998
Q ss_pred CCceEEEE--EecCCCCeEEEEe-CCceeeeccCCC--eEEEEECCCCCccceEE---EecccCCeEEEEECCC-CCEEE
Q psy10114 585 SVAKQVHK--LVGHTARVGALAW-NGDMLSSGSRDR--MILQRDVRTPNSQSERR---LVGHRQEVCGLKWSPD-NQYLA 655 (819)
Q Consensus 585 ~tgk~i~t--l~gHs~~V~sLaw-ng~~LaSGS~DG--tI~IWDi~t~~~~~v~~---l~gH~~~VtsLafSpd-g~~La 655 (819)
.+.+-... +......-.+..+ ++..++.|+.++ .+.+||..+........ .........++.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 87643322 2222223334554 777888887655 68999998866433221 1111222233555554 66777
Q ss_pred EEEC--C-----CeEEEEECCCCce-----eEEEec----CCCCEEEEEEcCCCCeEEEEEccC------CCCeEEEEEC
Q psy10114 656 SGGN--D-----NRLYVWNLHSMSP-----LQTYTE----HLAAVKAIAWSPHHHGLLASGGGT------ADRCIRFWNT 713 (819)
Q Consensus 656 SGS~--D-----GtI~IWDl~t~~~-----i~t~~~----h~~~VtsLafSPdg~~LLaSGgGs------~DgtIrIWDl 713 (819)
.||. + +.+.+||+.+.+- -..+.. ......++.+ .+ ..+++.||.+ ....+.+||.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TP-RKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ET-TEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CC-CEEEEECCccCCCCCCCCCeEEEEEC
Confidence 7765 2 4688999987761 111111 1111222222 22 3466666522 2356899999
Q ss_pred CCCcee
Q psy10114 714 LTGQPM 719 (819)
Q Consensus 714 ~tg~~v 719 (819)
.+++-.
T Consensus 634 ~t~~W~ 639 (695)
T 2zwa_A 634 LSETLT 639 (695)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 887643
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.55 Score=52.79 Aligned_cols=141 Identities=11% Similarity=0.143 Sum_probs=96.5
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccC--CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce------------
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSA--DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------------ 588 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~--h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk------------ 588 (819)
+..++ ...++.|+.-++..+..-+...+.. .-+.|..+..+|+|++||..+.. .|.|-.+..+.
T Consensus 32 ~t~i~-~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 32 GTRIV-FIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTEEE-EEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCEEE-EEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccccc
Confidence 44444 3455888888887544444555542 23468889999999999998764 68888776221
Q ss_pred EEEEEec------CCCCeEEEEeC-----CceeeeccCCCeEEEEECCCCCccceEEEe---------cccCCeEEEEEC
Q psy10114 589 QVHKLVG------HTARVGALAWN-----GDMLSSGSRDRMILQRDVRTPNSQSERRLV---------GHRQEVCGLKWS 648 (819)
Q Consensus 589 ~i~tl~g------Hs~~V~sLawn-----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~---------gH~~~VtsLafS 648 (819)
..+.+.- ...+|..+.|+ +..|++-..|+.|++||+......+. .+. .....|.+++|.
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEEC
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEc
Confidence 2334432 35789999993 66899999999999999986332222 221 223679999999
Q ss_pred CCCCEEEEEE--CCCeEEEE
Q psy10114 649 PDNQYLASGG--NDNRLYVW 666 (819)
Q Consensus 649 pdg~~LaSGS--~DGtI~IW 666 (819)
.++-.|...+ .+|.|+-.
T Consensus 189 ~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSSCEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEecCCCCCEEEE
Confidence 9887777755 77888654
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.12 Score=56.49 Aligned_cols=113 Identities=7% Similarity=0.021 Sum_probs=72.8
Q ss_pred CCEEEEEecCceEEEeecCCceEEEEEecC-CCCeEEEEe-----CCceeeec-cCCCeEEEEECCCCCccceEEEec--
Q psy10114 567 GNLVAVGTHHGYVQVWDVSVAKQVHKLVGH-TARVGALAW-----NGDMLSSG-SRDRMILQRDVRTPNSQSERRLVG-- 637 (819)
Q Consensus 567 G~~LAsGs~DGtI~IWDl~tgk~i~tl~gH-s~~V~sLaw-----ng~~LaSG-S~DGtI~IWDi~t~~~~~v~~l~g-- 637 (819)
+..+++++.||.|.-.|.++|+...+++.. ..++....- ++..++.. +.||.+..+|..++..........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 347899999999999999999999998754 122222211 12334443 689999999987764221111111
Q ss_pred ccCCeEE---EEE-----CCCCCEEEEEECCCeEEEEECCCCceeEEEec
Q psy10114 638 HRQEVCG---LKW-----SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE 679 (819)
Q Consensus 638 H~~~Vts---Laf-----Spdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~ 679 (819)
...++.. ... +.++..+++|+.+|++...|+++|+.+.++..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1111211 000 01456789999999999999999999999864
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.34 Score=51.47 Aligned_cols=185 Identities=12% Similarity=0.079 Sum_probs=92.7
Q ss_pred CeEEEEEcCCCceEEEEecc-CCCCCeEEEEEcCCCCEEEEEecC-----------------------------------
Q psy10114 533 SCVYLWSACTSQVTRLCDLS-ADGNSVTSVAWNERGNLVAVGTHH----------------------------------- 576 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~-~h~~~VtsLafSpdG~~LAsGs~D----------------------------------- 576 (819)
+.+.++|..+.+..++..+. .......++. .++++++.|+.+
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 46899999998877665444 2222233333 467788888754
Q ss_pred ----ceEEEeecCCceEEEE--EecC-CCCeEEEEeCCceeeeccC------CCeEEEEEC--CCCCccceEEEecccCC
Q psy10114 577 ----GYVQVWDVSVAKQVHK--LVGH-TARVGALAWNGDMLSSGSR------DRMILQRDV--RTPNSQSERRLVGHRQE 641 (819)
Q Consensus 577 ----GtI~IWDl~tgk~i~t--l~gH-s~~V~sLawng~~LaSGS~------DGtI~IWDi--~t~~~~~v~~l~gH~~~ 641 (819)
..+.+||..+.+-... +... .....++..++.+++.|+. ...+..+|+ .+.....+..+......
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred cCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 4789999987654332 2211 1113344457777777764 345777877 44332222111111111
Q ss_pred eEEEEECCCCCEEEEEECC----------------------CeEEEEECCCCc--eeEEEecCCCCEEEEEEcCCCCeEE
Q psy10114 642 VCGLKWSPDNQYLASGGND----------------------NRLYVWNLHSMS--PLQTYTEHLAAVKAIAWSPHHHGLL 697 (819)
Q Consensus 642 VtsLafSpdg~~LaSGS~D----------------------GtI~IWDl~t~~--~i~t~~~h~~~VtsLafSPdg~~LL 697 (819)
....+...+++.++.|+.+ ..+.+||+++.+ .+..+......-.++.+ + ..++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~ 320 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW--N-NSLL 320 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE--T-TEEE
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe--C-CEEE
Confidence 1111112256777777632 257789987654 23222222222222322 3 3466
Q ss_pred EEEccCCC----CeEEEEECCCCceeEEE
Q psy10114 698 ASGGGTAD----RCIRFWNTLTGQPMQCV 722 (819)
Q Consensus 698 aSGgGs~D----gtIrIWDl~tg~~v~~l 722 (819)
+.||.+.+ ..+.++++++++.+...
T Consensus 321 v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 321 IIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 66652222 24566688877765543
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.93 E-value=0.074 Score=58.02 Aligned_cols=200 Identities=8% Similarity=-0.038 Sum_probs=108.8
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEE--c-CCCCEEEEE-ecCceEEEeecCCceEEEEEec---
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAW--N-ERGNLVAVG-THHGYVQVWDVSVAKQVHKLVG--- 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLaf--S-pdG~~LAsG-s~DGtI~IWDl~tgk~i~tl~g--- 595 (819)
++.++.++.||.|+-.|..+|+..=..... ...++....- . .++..++.. +.||.+..+|.++|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 357889999999999999999765433322 1122222110 0 123333343 5899999999998866555442
Q ss_pred -CCCCeEE---EEe-------CCceeeeccCCCeEEEEECCCCCccceEEEecccCC-----eEEEEEC-----CCCCEE
Q psy10114 596 -HTARVGA---LAW-------NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE-----VCGLKWS-----PDNQYL 654 (819)
Q Consensus 596 -Hs~~V~s---Law-------ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~-----VtsLafS-----pdg~~L 654 (819)
...++.. ... .++.+++|+.+|.+...|.++++.........-... ..|.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 2222221 011 567889999999999999999874322221111110 0011110 124567
Q ss_pred EEEECCCeEEEEECCCCceeEEEe-----cCCCC--E-EEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE-EEcCC
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYT-----EHLAA--V-KAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ-CVDTG 725 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~-----~h~~~--V-tsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~-~l~~~ 725 (819)
+.|..+..+.+.+ ++++ +..++ ..... + ..-..+.++..++ +. .||.|.-+|..+|+.+. ..+..
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~---~dg~v~A~d~~~G~~~W~~~~l~ 242 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PF---RDKSLLASDLDFRIARWVSPTFP 242 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EE---TTTEEEEECSTTCCEEEECCCCS
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-EC---CCCEEEEEECCCCcEEEEeecCC
Confidence 7777777777766 4453 22211 10000 0 0000112355433 22 79999999999998876 45555
Q ss_pred CCeE
Q psy10114 726 SQVC 729 (819)
Q Consensus 726 s~V~ 729 (819)
+++.
T Consensus 243 sPv~ 246 (339)
T 2be1_A 243 GIIV 246 (339)
T ss_dssp SCEE
T ss_pred CCeE
Confidence 5544
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=94.93 E-value=8.1 Score=45.54 Aligned_cols=266 Identities=11% Similarity=0.071 Sum_probs=151.5
Q ss_pred EEEEEec-CCeEEEEECCCeEEEEEcCCCceEEEEeccC----CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 516 LNLVDWS-SQNVLSVGLGSCVYLWSACTSQVTRLCDLSA----DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 516 v~~ldwS-~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~----h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
+.++.-+ .+.+..++. +.+..++..+++.... .... ....|.++....++..|.+|+. +-+..+|..+++..
T Consensus 148 i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~ 224 (758)
T 3ott_A 148 IYSIIRTKDNQIYVGTY-NGLCRYIPSNGKFEGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK 224 (758)
T ss_dssp EEEEEECTTCCEEEEET-TEEEEEETTTTEEEEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE
T ss_pred EEEEEEcCCCCEEEEeC-CCHhhCccCCCceEEe-cCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE
Confidence 4444444 445666654 5688889887765432 2221 1235889988887777777775 45788898776543
Q ss_pred EEEecCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEE-----ecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 591 HKLVGHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRL-----VGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 591 ~tl~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l-----~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
.........|.++..+ ...|..|+.+ -+.+++..+......... .-....|.++....+|. |-.|+..| +.
T Consensus 225 ~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~ 301 (758)
T 3ott_A 225 QTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-IS 301 (758)
T ss_dssp EEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EE
T ss_pred eccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-cc
Confidence 2211123457777774 4456666654 577788765432111100 01224588998887776 44555666 54
Q ss_pred EEECCCCceeEEEe-------cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc--eeEEEc--------CCCC
Q psy10114 665 VWNLHSMSPLQTYT-------EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ--PMQCVD--------TGSQ 727 (819)
Q Consensus 665 IWDl~t~~~i~t~~-------~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~--~v~~l~--------~~s~ 727 (819)
+..... ....+. .....|.++.-..+|...+.+ .+| +..++..+++ ....+. ....
T Consensus 302 ~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt----~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 374 (758)
T 3ott_A 302 LSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG----ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNR 374 (758)
T ss_dssp EECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE----TTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSC
T ss_pred ccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee----CCc-ceeecccccccceeEEeccCCcCCCCCCCc
Confidence 443221 122221 123468888888888754443 344 5566655432 122221 1235
Q ss_pred eEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE-ec-----CCCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 728 VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL-TG-----HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 728 V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl-~g-----H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
|.++.-..+|+.-+. . ++-+..+|..+++...-. .. ....|.++....+|. |-.|+..+-|..+|..
T Consensus 375 v~~i~~d~~g~lWig---t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 375 IRHIYEDKEQQLWIA---T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKH 447 (758)
T ss_dssp EEEEEECTTSCEEEE---E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHH
T ss_pred eEEEEECCCCCEEEE---e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccc
Confidence 888887777775553 3 457999998776543221 11 124588888877775 4456766667788754
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=94.63 E-value=13 Score=46.69 Aligned_cols=241 Identities=9% Similarity=0.049 Sum_probs=130.8
Q ss_pred CeEEEEEcCCCceEEEEeccC-CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE-ecCCCCeEEEEeC----
Q psy10114 533 SCVYLWSACTSQVTRLCDLSA-DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL-VGHTARVGALAWN---- 606 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~-h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl-~gHs~~V~sLawn---- 606 (819)
+.|++.+...+.... ++.. .+..|...+.+ +.+++.++ ++.+.+++++.++..... ..-...|.|+++.
T Consensus 492 ~~Irli~~~~~~~~~--~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~ 566 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVS--EWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGD 566 (1158)
T ss_dssp SCEEEEESSSCCEEE--EECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSS
T ss_pred CEEEEEECCCCeEEE--EEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCC
Confidence 346677765543332 3332 23467777655 34677775 678888888765422211 1235689999983
Q ss_pred ----CceeeeccC-CCeEEEEECCCCCccceEEEecccCCeEEEEEC--CCCCEEEEEECCCeEEEEEC--CCCceeEE-
Q psy10114 607 ----GDMLSSGSR-DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWS--PDNQYLASGGNDNRLYVWNL--HSMSPLQT- 676 (819)
Q Consensus 607 ----g~~LaSGS~-DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafS--pdg~~LaSGS~DGtI~IWDl--~t~~~i~t- 676 (819)
++.++.|.. |++++++++.+.+......+.. .....++.+. ....+|..|-.||.+.-+.+ .+++....
T Consensus 567 ~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r 645 (1158)
T 3ei3_A 567 SNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRK 645 (1158)
T ss_dssp STTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEE
T ss_pred CcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccce
Confidence 358899986 9999999998654332222321 1223333322 23457889999998765554 44543321
Q ss_pred --EecCCCCEEEEEEcCCCC-eEEEEEccCCCCeEEEEECCCCcee-EEEcCCCCeEEEEEccC--CCEEEEEEecCCCe
Q psy10114 677 --YTEHLAAVKAIAWSPHHH-GLLASGGGTADRCIRFWNTLTGQPM-QCVDTGSQVCNLAWSKH--SSELVSTHGYSQNQ 750 (819)
Q Consensus 677 --~~~h~~~VtsLafSPdg~-~LLaSGgGs~DgtIrIWDl~tg~~v-~~l~~~s~V~sLafSpd--g~~LastsGssDg~ 750 (819)
+-+ ..++.-..+...+. .++++| ++-..++.-+ ++.. ..+....--....|+.. .+-++.+ .++.
T Consensus 646 ~~~LG-~~pv~L~~~~~~~~~~V~a~s----~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~---~~~~ 716 (1158)
T 3ei3_A 646 KVTLG-TQPTVLRTFRSLSTTNVFACS----DRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLALA---NNST 716 (1158)
T ss_dssp EEECC-SSCCEEEEEESSSCEEEEEES----SSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEEE---CSSC
T ss_pred eEEcC-CCceEEEEEeeCCceeEEEEC----CCCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEEEE---cCCc
Confidence 222 34454444444443 344442 4444444433 3322 22222222233345432 2344442 3456
Q ss_pred EEEEECCCCcEE--EEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 751 ILVWKYPTLTQV--AKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 751 I~IWDl~s~k~l--~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
++|..+++.... .++. -...+..++++|+.+.++.+..
T Consensus 717 LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 717 LTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp EEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEE
T ss_pred eEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEE
Confidence 888887654332 2232 3467899999998887766554
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=94.53 E-value=4.4 Score=43.72 Aligned_cols=199 Identities=11% Similarity=0.090 Sum_probs=105.1
Q ss_pred CCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEE---ecccCCeEEEEECCC---CCEEEEEEC----C----C
Q psy10114 598 ARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRL---VGHRQEVCGLKWSPD---NQYLASGGN----D----N 661 (819)
Q Consensus 598 ~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l---~gH~~~VtsLafSpd---g~~LaSGS~----D----G 661 (819)
..-..++| +|+ |+++..+|.|+++|. +++ ..+..+ ........+++++|+ +..|.++.. + +
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 44567888 454 555566699988873 322 222211 112356899999997 455544432 3 5
Q ss_pred eEEEEECCCC--c-----ee-EEEec-CCCCEEEEEEcCCCCeEEEEEcc----------CCCCeEEEEECCCC------
Q psy10114 662 RLYVWNLHSM--S-----PL-QTYTE-HLAAVKAIAWSPHHHGLLASGGG----------TADRCIRFWNTLTG------ 716 (819)
Q Consensus 662 tI~IWDl~t~--~-----~i-~t~~~-h~~~VtsLafSPdg~~LLaSGgG----------s~DgtIrIWDl~tg------ 716 (819)
.|..++.... . .+ ..+.. .......++|.|+|..+++.|.. +..+.|.-+|....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 7888887654 1 11 11221 11123679999999744444321 11256666665432
Q ss_pred ---ceeEEEcCCCCeEEEEEcc-CCCEEEEEEecCCC--eEEEEECCC----------------CcEEEEEecCCCCEEE
Q psy10114 717 ---QPMQCVDTGSQVCNLAWSK-HSSELVSTHGYSQN--QILVWKYPT----------------LTQVAKLTGHSYRVLY 774 (819)
Q Consensus 717 ---~~v~~l~~~s~V~sLafSp-dg~~LastsGssDg--~I~IWDl~s----------------~k~l~sl~gH~~~Vts 774 (819)
..+.... -.....++|+| +|+..++-.+ .+. .|.+..-.. ..++..+.........
T Consensus 186 f~~~~i~a~G-~rnp~Gla~d~~~g~l~v~d~g-~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 186 FPNSPIWSYG-HRNPQGIDWHRASGVMVATEHG-PVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp STTCCEEEEC-CSCCCEEEECTTTCCEEEEECC-SSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCcEEEEc-cCCcceEEEeCCCCCEEEEecC-CCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 1122222 23456899999 5555444322 221 243332110 0122233112345788
Q ss_pred EEEe-------cCCCEEEEEeCCCcEEEEECCCC
Q psy10114 775 LAMS-------PDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 775 LafS-------pDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
++|. .+|+++++.-..+.|...++...
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 8883 57777776666778888887753
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=1.3 Score=52.38 Aligned_cols=195 Identities=14% Similarity=0.095 Sum_probs=101.8
Q ss_pred CCCEEEEEecC----ceEEEeecCCceEEEEE-e-------cCCCCeEEEEe--CCceeeeccCC------CeEEEEECC
Q psy10114 566 RGNLVAVGTHH----GYVQVWDVSVAKQVHKL-V-------GHTARVGALAW--NGDMLSSGSRD------RMILQRDVR 625 (819)
Q Consensus 566 dG~~LAsGs~D----GtI~IWDl~tgk~i~tl-~-------gHs~~V~sLaw--ng~~LaSGS~D------GtI~IWDi~ 625 (819)
++..++.|+.+ ..+.+||..+++-...- . .....-.+... ++..++.||.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45555555532 35777887766533322 1 11222345556 67777777754 357888988
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCC--eEEEEECCCCceeEE-----EecCCCCEEEEEEcCCCCeEEE
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN--RLYVWNLHSMSPLQT-----YTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG--tI~IWDl~t~~~i~t-----~~~h~~~VtsLafSPdg~~LLa 698 (819)
+........+......- +++...+++.++.||.++ .+.+||..+.+=... .........++.+..+...+++
T Consensus 477 t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 76543332222211222 223323788888888755 689999877542111 1111122233555555456777
Q ss_pred EEccCCC-----CeEEEEECCCCce-----eEEE-c---CCCCeEEEEEccCCCEEEEEEec-------CCCeEEEEECC
Q psy10114 699 SGGGTAD-----RCIRFWNTLTGQP-----MQCV-D---TGSQVCNLAWSKHSSELVSTHGY-------SQNQILVWKYP 757 (819)
Q Consensus 699 SGgGs~D-----gtIrIWDl~tg~~-----v~~l-~---~~s~V~sLafSpdg~~LastsGs-------sDg~I~IWDl~ 757 (819)
.||...+ +.+..||+.+.+- -..+ . ....-.+++...+++ +++.+|. ..+.+.+||..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECC
Confidence 7763222 5688999988761 1122 1 111112222223344 4444342 23569999988
Q ss_pred CCcEE
Q psy10114 758 TLTQV 762 (819)
Q Consensus 758 s~k~l 762 (819)
+.+-.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 76544
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=93.87 E-value=6.9 Score=43.89 Aligned_cols=160 Identities=16% Similarity=0.166 Sum_probs=91.2
Q ss_pred ccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee--EEEec------CCCCEEEEEEcCC---CCeEEEEEccC---
Q psy10114 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL--QTYTE------HLAAVKAIAWSPH---HHGLLASGGGT--- 703 (819)
Q Consensus 638 H~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i--~t~~~------h~~~VtsLafSPd---g~~LLaSGgGs--- 703 (819)
.-....+|+|.|+|+.+++-...+.|++++..+++.. ..+.. .......|+|+|+ +..++++-...
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3456789999999997776544457998887655432 22221 2456779999996 56666654310
Q ss_pred -C------CCeEEEEECCCC--c-----eeE-EEcC--CCCeEEEEEccCCCEEEEEEecC-------------------
Q psy10114 704 -A------DRCIRFWNTLTG--Q-----PMQ-CVDT--GSQVCNLAWSKHSSELVSTHGYS------------------- 747 (819)
Q Consensus 704 -~------DgtIrIWDl~tg--~-----~v~-~l~~--~s~V~sLafSpdg~~LastsGss------------------- 747 (819)
. ...|.-++...+ + .+. .+.. ......++|.|||...+++ |..
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~-Gd~~~~~~~~~~~~~~~~~~p~ 183 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI-GDQGRNQLAYLFLPNQAQHTPT 183 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE-CCTTTTSGGGTTSCCCTTCCCC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE-CCCCCCCccccccccccccccc
Confidence 0 235555554332 1 111 1221 2457899999999866664 431
Q ss_pred ------------CCeEEEEECCCCc-----------EEEEE-ecCCCCEEEEEEecCCCEEEEE-eCCCcEEEEECCC
Q psy10114 748 ------------QNQILVWKYPTLT-----------QVAKL-TGHSYRVLYLAMSPDGEAIVTG-AGDETLRFWNVFS 800 (819)
Q Consensus 748 ------------Dg~I~IWDl~s~k-----------~l~sl-~gH~~~VtsLafSpDG~~LaSG-S~DGtIrIWdl~s 800 (819)
.|.|.-++.. ++ ....+ .+|. ....++|+++|++.++- +.|+.-.|..+..
T Consensus 184 ~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~R-Np~gla~dp~G~L~~~d~g~~~~dein~i~~ 259 (454)
T 1cru_A 184 QQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHR-NPQGLAFTPNGKLLQSEQGPNSDDEINLIVK 259 (454)
T ss_dssp HHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCS-EEEEEEECTTSCEEEEEECSSSCEEEEECCT
T ss_pred cccccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCC-CcceEEECCCCCEEEEecCCCCCeEEEEecC
Confidence 1445444432 22 11112 2443 47889999998866653 3344445555544
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=93.62 E-value=1.1 Score=50.53 Aligned_cols=105 Identities=18% Similarity=0.249 Sum_probs=76.5
Q ss_pred EcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-----CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc---
Q psy10114 689 WSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG-----SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT--- 760 (819)
Q Consensus 689 fSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~-----s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k--- 760 (819)
.+.+|..+++. .++.||.-++..+...+.+... ..+..+..+|+|++++.. .+..|.|..++.+.
T Consensus 28 ~~~n~t~i~~a----~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~---g~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 28 SSQNGTRIVFI----QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF---NDNEIFVMEVPWGYSNV 100 (452)
T ss_dssp EETTTTEEEEE----ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE---CSSEEEEEECCTTCSCC
T ss_pred EEcCCCEEEEE----ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe---cCCeEEEEEecCccccC
Confidence 34455556655 5788998888755555555443 368889999999999985 36789999887321
Q ss_pred ---------EEEEEec------CCCCEEEEEEecC---CCEEEEEeCCCcEEEEECCC
Q psy10114 761 ---------QVAKLTG------HSYRVLYLAMSPD---GEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 761 ---------~l~sl~g------H~~~VtsLafSpD---G~~LaSGS~DGtIrIWdl~s 800 (819)
+...+.- ...+|..+.|+|- |..|++-..|+.||+||+..
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1223332 2567999999994 56899999999999999986
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=93.45 E-value=12 Score=41.88 Aligned_cols=104 Identities=10% Similarity=0.119 Sum_probs=59.5
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE--EEEec------CCCCeEEEEeC-----CceeeeccC-------
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV--HKLVG------HTARVGALAWN-----GDMLSSGSR------- 615 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i--~tl~g------Hs~~V~sLawn-----g~~LaSGS~------- 615 (819)
....+++|.|+|+++++-...+.|.+++..+++.. ..+.. .......|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45679999999987766544457888886555432 22221 24567789996 344443321
Q ss_pred ------CCeEEEEECCCCCc-----cceE-EEe-cccCCeEEEEECCCCCEEEEEEC
Q psy10114 616 ------DRMILQRDVRTPNS-----QSER-RLV-GHRQEVCGLKWSPDNQYLASGGN 659 (819)
Q Consensus 616 ------DGtI~IWDi~t~~~-----~~v~-~l~-gH~~~VtsLafSpdg~~LaSGS~ 659 (819)
...|.-++...... ..+. .+. ........|+|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 23565565543211 1111 111 11234689999999997776553
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=93.07 E-value=2 Score=46.31 Aligned_cols=144 Identities=12% Similarity=0.113 Sum_probs=81.7
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee---EEE----ecCCCCEEEEEEcCC---CCeEEEEEcc-CC---
Q psy10114 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL---QTY----TEHLAAVKAIAWSPH---HHGLLASGGG-TA--- 704 (819)
Q Consensus 639 ~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i---~t~----~~h~~~VtsLafSPd---g~~LLaSGgG-s~--- 704 (819)
-....+|+|.|+|+.++++..+|.|++++.. ++.. ..+ .........++++|+ +..++++... ..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4467899999999834455678999999853 3221 111 122346789999996 5556665321 01
Q ss_pred -CCeEEEEECCCC--c--eeEEE----c----CCCCeEEEEEccCCCEEEEEEecC------------CCeEEEEECCCC
Q psy10114 705 -DRCIRFWNTLTG--Q--PMQCV----D----TGSQVCNLAWSKHSSELVSTHGYS------------QNQILVWKYPTL 759 (819)
Q Consensus 705 -DgtIrIWDl~tg--~--~v~~l----~----~~s~V~sLafSpdg~~LastsGss------------Dg~I~IWDl~s~ 759 (819)
...|..++...+ . ....+ . .......++|.|||. |+++.|.. .+.|.-++....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235666666543 1 11111 1 112356799999995 44443432 246777775421
Q ss_pred --------------cEEEEEecCCCCEEEEEEec-CCCEEEE
Q psy10114 760 --------------TQVAKLTGHSYRVLYLAMSP-DGEAIVT 786 (819)
Q Consensus 760 --------------k~l~sl~gH~~~VtsLafSp-DG~~LaS 786 (819)
..+.. .++. ....++|++ +|++.++
T Consensus 175 ~p~~npf~~~~~~~~~i~a-~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWS-YGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEE-ECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCCCCcCCCCCCccEEE-EcCc-CccceEEECCCCCEEEE
Confidence 11211 2343 368899999 5655554
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=92.90 E-value=6.3 Score=42.86 Aligned_cols=151 Identities=16% Similarity=0.069 Sum_probs=88.5
Q ss_pred EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee--EEE----ecCCCCEEEEEEcCC---CCeEEEEEccCC
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL--QTY----TEHLAAVKAIAWSPH---HHGLLASGGGTA 704 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i--~t~----~~h~~~VtsLafSPd---g~~LLaSGgGs~ 704 (819)
.+...-....+|+|.|||+.+++--..|.|++++..+++.. ..+ .........|+++|+ +..++++-+...
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 33444456789999999997776655899999987655532 211 123566889999996 444555422123
Q ss_pred CCeEEEEECCCC----------cee-EEEc--CCCCeEEEEEccCCCEEEEEEec------------CCCeEEEEECCCC
Q psy10114 705 DRCIRFWNTLTG----------QPM-QCVD--TGSQVCNLAWSKHSSELVSTHGY------------SQNQILVWKYPTL 759 (819)
Q Consensus 705 DgtIrIWDl~tg----------~~v-~~l~--~~s~V~sLafSpdg~~LastsGs------------sDg~I~IWDl~s~ 759 (819)
++.|.-|....+ +.+ ..+. .......++|.|||...+++ |. ..|.|.-.+....
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~-Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT-GESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC-BCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE-CCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 456666665542 111 1222 12345679999999766553 42 1355555554321
Q ss_pred ---------cEEEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 760 ---------TQVAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 760 ---------k~l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
..+. -.+|.. ...++|+|+|++.++-
T Consensus 185 ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 185 PAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp BCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred ccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence 1121 124543 5679999998766653
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=91.95 E-value=7.3 Score=45.28 Aligned_cols=229 Identities=13% Similarity=0.099 Sum_probs=140.4
Q ss_pred EEEEEecCceEEEeecCCceEEEEEecCC-------------------------CCe--EEEEe-----CCceeeecc-C
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLVGHT-------------------------ARV--GALAW-----NGDMLSSGS-R 615 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~gHs-------------------------~~V--~sLaw-----ng~~LaSGS-~ 615 (819)
.+.+|+..|.|+|+-+.+++.++.+.-.+ +.. ..+++ +|.+|+.-. .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 46788899999999999999888764110 000 12343 344555544 4
Q ss_pred CCeEEEEECCCCCccceEEEecccCCeEEEEEC--CCCCEEEEEEC-------CCeE------------EEEECCCCcee
Q psy10114 616 DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWS--PDNQYLASGGN-------DNRL------------YVWNLHSMSPL 674 (819)
Q Consensus 616 DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafS--pdg~~LaSGS~-------DGtI------------~IWDl~t~~~i 674 (819)
+..|...+++.-+...+.. ....+.+.++.|- |+..+++.+++ ||.. ...|..+.+..
T Consensus 152 n~RvAri~l~~~~~d~Ii~-iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~ 230 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMIT-VPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMA 230 (638)
T ss_dssp TTEEEEEETTTTEEEEEEE-CTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEE
T ss_pred CcceEEEECCcEeeceeEe-CCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEE
Confidence 5567677777655433332 3355678888886 67788888775 3331 11223333322
Q ss_pred EEEecCCCCEEEEEEcCCCCeEEEEEccCC------------------------------------CC-eEEEEECCC--
Q psy10114 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTA------------------------------------DR-CIRFWNTLT-- 715 (819)
Q Consensus 675 ~t~~~h~~~VtsLafSPdg~~LLaSGgGs~------------------------------------Dg-tIrIWDl~t-- 715 (819)
.++.- .+........+++++.++++-.++ ++ .+.+.|.+.
T Consensus 231 ~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~ 309 (638)
T 3sbq_A 231 FQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD 309 (638)
T ss_dssp EEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred EEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence 22211 223334556778887777763111 11 355556554
Q ss_pred --C-ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE-------------EEEEecCCCCEEEEEEec
Q psy10114 716 --G-QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ-------------VAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 716 --g-~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~-------------l~sl~gH~~~VtsLafSp 779 (819)
+ .....+........+..+|||+++++. |-.+.++.++|+..... ..+.+ -.-.....+|.+
T Consensus 310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~-GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAA-GKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG 387 (638)
T ss_dssp TBCCSSEEEEEESSSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS
T ss_pred ccCCceEEEEeCCCCCcceeeCCCCCEEEEc-CCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC
Confidence 2 223344445566778999999999986 77789999999874211 33333 234578899999
Q ss_pred CCCEEEEEeCCCcEEEEECCCC
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+|....|---|..|.-|++...
T Consensus 388 ~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 388 RGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp SSEEEEEETTTTEEEEEEHHHH
T ss_pred CCceEeeeeecceEEEEeccHH
Confidence 9965566668999999999764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=91.10 E-value=3 Score=53.38 Aligned_cols=180 Identities=13% Similarity=0.204 Sum_probs=109.7
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCC-ceEEEEeccCC----CCCeEEEEEcCCCCEEEEEe-------cCceEEEee
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTS-QVTRLCDLSAD----GNSVTSVAWNERGNLVAVGT-------HHGYVQVWD 583 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg-~~~~l~~l~~h----~~~VtsLafSpdG~~LAsGs-------~DGtI~IWD 583 (819)
+.-..|-+...++-=.+..|+-|+..+. ...++ +..| +..|..-.-++++++++..+ -.|.+++|+
T Consensus 108 VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~--fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS 185 (1630)
T 1xi4_A 108 VTFWKWISLNTVALVTDNAVYHWSMEGESQPVKM--FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (1630)
T ss_pred ceEEEecCCCeeEEEcCCeEEEeccCCCCccHHH--HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeee
Confidence 5667888887777777899999999642 22222 2222 35677778888888877543 358899999
Q ss_pred cCCceEEEEEecCCCCeEEEEeCCc-----eeeecc---CCCeEEEEECCCC-Cc--cceEE-----E--ecccCCeEEE
Q psy10114 584 VSVAKQVHKLVGHTARVGALAWNGD-----MLSSGS---RDRMILQRDVRTP-NS--QSERR-----L--VGHRQEVCGL 645 (819)
Q Consensus 584 l~tgk~i~tl~gHs~~V~sLawng~-----~LaSGS---~DGtI~IWDi~t~-~~--~~v~~-----l--~gH~~~VtsL 645 (819)
.+.+ .-+.+.||.+....+..+|+ .++.+. ..+.+.+-++... .. ..... + ..-.+-..++
T Consensus 186 ~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~ 264 (1630)
T 1xi4_A 186 VDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (1630)
T ss_pred cccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEE
Confidence 8754 34455667665555555322 222221 1368888888653 11 10000 0 0112334567
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEE
Q psy10114 646 KWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 646 afSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLa 698 (819)
..|+.-..+...+.-|.|.++|+.++.++..-+-....|...+-+.....+++
T Consensus 265 ~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~ 317 (1630)
T 1xi4_A 265 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG 317 (1630)
T ss_pred EeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEE
Confidence 77777778888899999999999999987665544444444443333333333
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=90.11 E-value=5.9 Score=40.84 Aligned_cols=147 Identities=11% Similarity=0.053 Sum_probs=87.4
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCCce------eEEEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE
Q psy10114 640 QEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP------LQTYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 640 ~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~------i~t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD 712 (819)
..+..++|+|+|.+.++ .+|.++-.+..+... -..+-. --..-.++.|.|+|...++ .||.|.-++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-----~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-----SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-----ETTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-----CCCEEEEeC
Confidence 46779999999987776 667777777644221 111110 1111478999999984444 369998887
Q ss_pred CCCCcee------EEEcC--CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc------EEEEEe-cCCCCEEEEEE
Q psy10114 713 TLTGQPM------QCVDT--GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT------QVAKLT-GHSYRVLYLAM 777 (819)
Q Consensus 713 l~tg~~v------~~l~~--~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k------~l~sl~-gH~~~VtsLaf 777 (819)
-.+.... ..+.. -..+..+.+.|+|...++ . |+.+.-...++.. ....+- +.-..-..+.|
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav--~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f 189 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV--H--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFF 189 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE--E--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEE--e--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEE
Confidence 6432211 12211 145799999999988777 3 6665544444222 111121 33334566789
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 778 SPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 778 SpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+++|...++. +| ++|.....
T Consensus 190 ~~~G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 190 SSVGTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp CTTSCEEEEE--TT--EEEEESCC
T ss_pred CCCCcEEEEe--CC--eEEecCCc
Confidence 9999877665 66 55655443
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=89.91 E-value=23 Score=37.91 Aligned_cols=264 Identities=6% Similarity=-0.016 Sum_probs=122.7
Q ss_pred CCeEEEEECCCeEEEEEcCC--CceEEEEeccCCCCCeEEEEEcC-CCCEEEEEecCc----eEEEeecCCceEEEEEec
Q psy10114 523 SQNVLSVGLGSCVYLWSACT--SQVTRLCDLSADGNSVTSVAWNE-RGNLVAVGTHHG----YVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~t--g~~~~l~~l~~h~~~VtsLafSp-dG~~LAsGs~DG----tI~IWDl~tgk~i~tl~g 595 (819)
...+.+++..| +.+.+... ......... .....|.+|++.| +...+.+|+..| .|...+ +.++.-..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 34677777655 55555433 234332211 2246799999998 333444555444 343322 22322222211
Q ss_pred --------------CCCCeEEEEeC----CceeeeccCCCeEEEEECCCCCccceEEEe----------------cccCC
Q psy10114 596 --------------HTARVGALAWN----GDMLSSGSRDRMILQRDVRTPNSQSERRLV----------------GHRQE 641 (819)
Q Consensus 596 --------------Hs~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~----------------gH~~~ 641 (819)
....|.+++++ ++.+.+++..+.|...+-.......+.... .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 11257788884 567777766666654432222211111010 11235
Q ss_pred eEEEEECCC-CCEEEEEECCCeEEEEECCCCceeEEEecC-------------CCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 642 VCGLKWSPD-NQYLASGGNDNRLYVWNLHSMSPLQTYTEH-------------LAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 642 VtsLafSpd-g~~LaSGS~DGtI~IWDl~t~~~i~t~~~h-------------~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
+.++.++|. ...+..+..++.|...+ ..++.-..+... ...+.+++++|.....+..+. ++.
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~---~~g 254 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN---HCG 254 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE---TTE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc---CCe
Confidence 788999883 44555555555454432 222222222110 134889999987433333332 334
Q ss_pred EEEEECCCCceeEEEcC--C----CCeEEEEEccC-CCEEEEEEecC---------CCeEEEEECCC-CcEEEEEe-cCC
Q psy10114 708 IRFWNTLTGQPMQCVDT--G----SQVCNLAWSKH-SSELVSTHGYS---------QNQILVWKYPT-LTQVAKLT-GHS 769 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~--~----s~V~sLafSpd-g~~LastsGss---------Dg~I~IWDl~s-~k~l~sl~-gH~ 769 (819)
|...+ ..++.-..+.. . ..+..++++|. ...+++..... ++...+|...+ ++.-..+. +-.
T Consensus 255 l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp 333 (394)
T 3b7f_A 255 IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLP 333 (394)
T ss_dssp EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSC
T ss_pred EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCC
Confidence 44443 23333333321 1 23567788763 34455532111 23344554443 23222222 111
Q ss_pred C-----C--EEEEEEecC-CCEEEEEeCCCcEE
Q psy10114 770 Y-----R--VLYLAMSPD-GEAIVTGAGDETLR 794 (819)
Q Consensus 770 ~-----~--VtsLafSpD-G~~LaSGS~DGtIr 794 (819)
. . ...++++|. +..|+.++.++.|.
T Consensus 334 ~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 334 TDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp CSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 0 1 135788774 34566666666554
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=86.88 E-value=36 Score=40.41 Aligned_cols=230 Identities=10% Similarity=0.092 Sum_probs=120.3
Q ss_pred EcCCCCEEEEEec-----CceEEEeecCCceEEEE-EecCCC--------CeEEEEe-CCceeeecc-----------CC
Q psy10114 563 WNERGNLVAVGTH-----HGYVQVWDVSVAKQVHK-LVGHTA--------RVGALAW-NGDMLSSGS-----------RD 616 (819)
Q Consensus 563 fSpdG~~LAsGs~-----DGtI~IWDl~tgk~i~t-l~gHs~--------~V~sLaw-ng~~LaSGS-----------~D 616 (819)
++|++++++.+-+ -..++++|+++++.+.. +. ... ....++| +++.++.+. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 7788887776532 24699999999987631 11 111 1134477 444443332 23
Q ss_pred CeEEEEECCCCCccceEEEecccCCe-EEEEECCCCC-----EEEEEECC---CeEEEEECCC--CceeEEEecCCCCEE
Q psy10114 617 RMILQRDVRTPNSQSERRLVGHRQEV-CGLKWSPDNQ-----YLASGGND---NRLYVWNLHS--MSPLQTYTEHLAAVK 685 (819)
Q Consensus 617 GtI~IWDi~t~~~~~v~~l~gH~~~V-tsLafSpdg~-----~LaSGS~D---GtI~IWDl~t--~~~i~t~~~h~~~Vt 685 (819)
..|+.|.+-++...-...+.+....+ .+...+++++ .+++.+.+ +.+.+.|... ++ ...+......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-- 292 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSDA-- 292 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTTC--
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCcc--
Confidence 57888888776544444555444333 3455566766 24444422 4567777653 32 2333222221
Q ss_pred EEEEcCCCCeEEEEEc-------cCCCCeEEEEECCCCc-------eeEE-EcC--CCCeEEEEEccCCCEEEEEEecCC
Q psy10114 686 AIAWSPHHHGLLASGG-------GTADRCIRFWNTLTGQ-------PMQC-VDT--GSQVCNLAWSKHSSELVSTHGYSQ 748 (819)
Q Consensus 686 sLafSPdg~~LLaSGg-------Gs~DgtIrIWDl~tg~-------~v~~-l~~--~s~V~sLafSpdg~~LastsGssD 748 (819)
.+..+.++..++.+.. +...+.|...|+.++. ..+. +.. ...+..+.|..+ ..+++ ...+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~--~~~~ 369 (711)
T 4hvt_A 293 TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA--TYDN 369 (711)
T ss_dssp EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE--EEET
T ss_pred eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE--EEEC
Confidence 1233445543332211 0135778888887642 2222 333 345778888765 34444 3344
Q ss_pred C--eEEEEECCCCc-EEEE-EecC-CCCEEEEEEecCCC-EEEEEeC---CCcEEEEECC
Q psy10114 749 N--QILVWKYPTLT-QVAK-LTGH-SYRVLYLAMSPDGE-AIVTGAG---DETLRFWNVF 799 (819)
Q Consensus 749 g--~I~IWDl~s~k-~l~s-l~gH-~~~VtsLafSpDG~-~LaSGS~---DGtIrIWdl~ 799 (819)
+ .+.++|..+++ .... +.-. .+.+.....++++. ++++.+. -+.+..+|+.
T Consensus 370 ~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 370 VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 4 57777766654 2223 2211 34566667777765 4444443 3567777776
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=83.69 E-value=14 Score=38.06 Aligned_cols=103 Identities=11% Similarity=0.145 Sum_probs=60.8
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCce------EEEEEe--cCCCCeEEEEeCCc--eeeeccCCCeEEEEECC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------QVHKLV--GHTARVGALAWNGD--MLSSGSRDRMILQRDVR 625 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk------~i~tl~--gHs~~V~sLawng~--~LaSGS~DGtI~IWDi~ 625 (819)
..++.++|+|+|.+.++ .+|.+.-.+..+++ .-..+- +-. ...++.|+++ +.++ .||.|.-++..
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 36779999999987777 67776666654411 111111 111 1457777544 4444 66999877754
Q ss_pred CCCccce----EEE-ecccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy10114 626 TPNSQSE----RRL-VGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665 (819)
Q Consensus 626 t~~~~~v----~~l-~gH~~~VtsLafSpdg~~LaSGS~DGtI~I 665 (819)
+...... ..+ ..-=..+..|.+.|+|.+.++. |+.++-
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 3222110 111 1112468999999999988777 777543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 819 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-31 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-21 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 6e-17 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-16 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 6e-04 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 5e-29 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 9e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 4e-22 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 5e-13 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-17 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-10 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 3e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 7e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-16 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-12 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-11 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-16 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-15 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-13 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 8e-11 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 8e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-14 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-09 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-08 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-07 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 8e-04 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 4e-14 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 7e-14 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-08 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-08 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 9e-13 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 9e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-12 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-10 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 8e-10 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-12 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-11 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 5e-12 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 3e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 3e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 9e-12 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-11 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-11 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 7e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-06 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-10 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-08 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 5e-04 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-10 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-10 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.003 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 8e-10 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.002 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 1e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-07 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 1e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 9e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.001 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 1e-06 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 1e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 1e-04 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 1e-04 | |
| d1qnia2 | 441 | b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter | 3e-04 | |
| d2dg1a1 | 319 | b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus | 0.001 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 122 bits (306), Expect = 3e-31
Identities = 62/308 (20%), Positives = 109/308 (35%), Gaps = 66/308 (21%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW----- 605
LS + VT V ++ +++ + ++VWD L GHT V +++
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 606 ---------------------------------------NGDMLSSGSRDRMILQRDVRT 626
NGD + S SRD+ I +V+T
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKA 686
+ GHR+ V ++ + D +AS ND + VW + + EH V+
Sbjct: 133 G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 687 IAWSPHHHGLLASGG-----------------GTADRCIRFWNTLTGQPMQCVDT-GSQV 728
I+W+P S G+ D+ I+ W+ TG + + + V
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 788
+ + ++S + VW Y + L H + V L +VTG+
Sbjct: 251 RGVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 308
Query: 789 GDETLRFW 796
D+T++ W
Sbjct: 309 VDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.4 bits (233), Expect = 1e-21
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 29/213 (13%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
+ +++S + +W T + + V V N+ G L+A ++ V+
Sbjct: 111 PNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 581 VWDVSVAKQVHKLVGHTARVGALAW----------------------NGDMLSSGSRDRM 618
VW V+ + +L H V ++W G L SGSRD+
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT 678
I DV T LVGH V G+ + +++ S +D L VW+ + ++T
Sbjct: 229 IKMWDVST--GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286
Query: 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFW 711
H V ++ + + +G D+ ++ W
Sbjct: 287 AHEHFVTSLDFHKTAP-YVVTGS--VDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.6 bits (197), Expect = 6e-17
Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 4/174 (2%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKA 686
P + L GHR V + + P + S D + VW+ + +T H +V+
Sbjct: 5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64
Query: 687 IAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746
I++ + + V +++ + +VS
Sbjct: 65 ISFDHSGKL--LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 747 SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800
++ W+ T V TGH V + + DG I + + D+T+R W V +
Sbjct: 123 KTIKM--WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 174
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.8 bits (195), Expect = 1e-16
Identities = 52/277 (18%), Positives = 93/277 (33%), Gaps = 68/277 (24%)
Query: 588 KQVHKLVGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645
+ + L GH + V + ++ ++ S S D I D T ER L GH V +
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET--GDFERTLKGHTDSVQDI 65
Query: 646 KW------------------------------------------SPDNQYLASGGNDNRL 663
+ P+ ++ S D +
Sbjct: 66 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 125
Query: 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723
+W + + ++T+T H V+ + + L+AS D+ +R W T + +
Sbjct: 126 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSN--DQTVRVWVVATKECKAELR 182
Query: 724 TGSQVCN-LAWSKHSSELVSTH------------------GYSQNQILVWKYPTLTQVAK 764
V ++W+ SS + G I +W T +
Sbjct: 183 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242
Query: 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
L GH V + G+ I++ A D+TLR W+ +K
Sbjct: 243 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 279
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.5 bits (93), Expect = 6e-04
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 515 YLNLVDWSSQN--VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV 572
++ V + S +LS + +W + + L+A + VTS+ +++ V
Sbjct: 249 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 573 GTHHGYVQVWD 583
G+ V+VW+
Sbjct: 307 GSVDQTVKVWE 317
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 116 bits (291), Expect = 5e-29
Identities = 49/292 (16%), Positives = 90/292 (30%), Gaps = 47/292 (16%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML 610
L + ++ W L+ + G + +WD +VH + ++ V A+
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 611 SSGSRDRMILQRDVRTPNSQSERRLVGHRQ------------------------------ 640
+ + R+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 641 ---------------EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK 685
+V L +PD + SG D +W++ QT+T H + +
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745
AI + P+ + R + + ++++SK L++ G
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA--G 288
Query: 746 YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
Y VW + L GH RV L ++ DG A+ TG+ D L+ WN
Sbjct: 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 74.0 bits (180), Expect = 9e-15
Identities = 44/212 (20%), Positives = 73/212 (34%), Gaps = 5/212 (2%)
Query: 588 KQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGL 645
+ L GH A++ A+ W + +L S S+D ++ D T N + V
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN--KVHAIPLRSSWVMTC 103
Query: 646 KWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705
++P Y+A GG DN ++NL + + LA + D
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL 765
W+ TGQ + + L + G +W
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS-GACDASAKLWDVREGMCRQTF 222
Query: 766 TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
TGH + + P+G A TG+ D T R ++
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLFD 254
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 97.2 bits (240), Expect = 4e-22
Identities = 62/387 (16%), Positives = 122/387 (31%), Gaps = 52/387 (13%)
Query: 459 LPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVLDAPELQDDF---- 514
+P + + + P+ L L+ + EL
Sbjct: 4 VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTS 63
Query: 515 YLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTR----------------LCDLSADGNS 557
+ V +S+ L+ G ++ + +
Sbjct: 64 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 123
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDR 617
+ SV ++ G +A G +++WD+ K V L GH + +L + S
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183
Query: 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM------ 671
R Q L D +Y+A+G D + VW+ +
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 243
Query: 672 -SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT------ 724
S ++ T H +V ++ ++ +++ G+ DR ++ WN T
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVS---GSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 725 -------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLA- 776
V ++A +++ ++S G +L W + + L GH V+ +A
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358
Query: 777 -----MSPDGEAIVTGAGDETLRFWNV 798
+ P+ TG+GD R W
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.4 bits (168), Expect = 5e-13
Identities = 54/282 (19%), Positives = 104/282 (36%), Gaps = 40/282 (14%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL------------------VGHT 597
+ V V ++ G +A G + QV+ VS V +L
Sbjct: 63 SVVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSD 121
Query: 598 ARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASG 657
+ ++ ++ D + L R N + L GH Q++ L + P L SG
Sbjct: 122 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG 181
Query: 658 GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ 717
D + +W+L + T + + A G+ DR +R W++ TG
Sbjct: 182 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA---GSLDRAVRVWDSETGF 238
Query: 718 PMQCVDTGSQ--------VCNLAWSKHSSELVSTHG----------YSQNQILVWKYPTL 759
++ +D+ ++ V ++ +++ +VS + N+ +
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 760 TQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
T GH VL +A + + E I++G+ D + FW+ S
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 340
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 82.6 bits (202), Expect = 2e-17
Identities = 34/263 (12%), Positives = 87/263 (33%), Gaps = 22/263 (8%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLS 611
++ AWN+ +A+ ++ V +++ S K QVH+L H +V + W + + +
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671
+ DR ++ + ++ + ++W+P+ + A G + +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 672 SPLQTYTEHLAAVKAIAWSPHHHGLLA-SGGGTADRCIRFWNTLTGQPMQCVDTGSQVCN 730
+ +++ S H G+ D R ++ + +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 731 LAWSKHSSELVSTHGY-----------------SQNQILVWKYPTLTQVAKLTGHSYRVL 773
+ + + E S+ G+ + + + VA L + +L
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247
Query: 774 YLAMSPDGEAIVTGAGDETLRFW 796
+ + + G + F
Sbjct: 248 AVTFITESSLVAAGHDCFPVLFT 270
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.4 bits (147), Expect = 2e-10
Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 10/171 (5%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP--LQTYTEHLAAVKAIAWSPHHHG 695
+ + W+ D +A N++ ++++ + EH V + W+P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN- 64
Query: 696 LLASGGGTADRCIRFWNTLTGQPMQCVDTGSQV-CNLAWSKHSSELVSTHGYSQNQILVW 754
+ + G DR W + +E G I +
Sbjct: 65 RIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 122
Query: 755 KYPTLTQVAKLTGHSYR----VLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801
+ VL L P+ + G+ D R ++ + K
Sbjct: 123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.0 bits (120), Expect = 3e-07
Identities = 34/308 (11%), Positives = 79/308 (25%), Gaps = 34/308 (11%)
Query: 519 VDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH 576
VDW+ S +++ G Y+W+ + + V W AVG+
Sbjct: 57 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 116
Query: 577 GYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML----------------------SSGS 614
+ + + + + D
Sbjct: 117 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE 176
Query: 615 RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674
+ P + V G+ +S + +A +D+ + + + +
Sbjct: 177 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 236
Query: 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWS 734
T + A+ + L+A+G D + + V +
Sbjct: 237 ATLASETLPLLAVTFITESS-LVAAG---HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQ 292
Query: 735 KHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA----IVTGAGD 790
+ + + + + H V +++ G+A T D
Sbjct: 293 RGLTARERFQNLDKKASSEGSAAAGAGL--DSLHKNSVSQISVLSGGKAKCSQFCTTGMD 350
Query: 791 ETLRFWNV 798
+ W+V
Sbjct: 351 GGMSIWDV 358
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.9 bits (117), Expect = 7e-07
Identities = 19/162 (11%), Positives = 53/162 (32%), Gaps = 6/162 (3%)
Query: 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT 574
+++ V +S+ + + A + + L+++ + +V + +LVA G
Sbjct: 203 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG- 261
Query: 575 HHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR 634
H + ++ A G + G ++ + + +
Sbjct: 262 HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN-LDKKASSEGSAAAGAGL 320
Query: 635 LVGHRQEVCGLKWSPDNQY----LASGGNDNRLYVWNLHSMS 672
H+ V + + + G D + +W++ S+
Sbjct: 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.1 bits (193), Expect = 2e-16
Identities = 58/286 (20%), Positives = 108/286 (37%), Gaps = 18/286 (6%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
WSSQ ++ + + T C + G++ T + V G+ ++
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640
VWD+ + +H L+GH A V + ++G + SG+ D M+ D T L GH
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL--HTLQGHTN 178
Query: 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700
V D ++ SG D + VW++ + + + T T H + + + +L SG
Sbjct: 179 RVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSG 233
Query: 701 GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT 760
AD ++ W+ TGQ +Q + ++ + ++ + +W T
Sbjct: 234 --NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 291
Query: 761 QVAKLT-----GHSYRVLYLAMSPDGEAIVTGAGDET----LRFWN 797
+ L G V + S G+ + T L +
Sbjct: 292 FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (163), Expect = 1e-12
Identities = 43/209 (20%), Positives = 67/209 (32%), Gaps = 41/209 (19%)
Query: 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAV 684
R +S + L GH V + SG +DN L VW+ + L+T H V
Sbjct: 2 RRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 685 KAIAWSP-----------------------------------HHHGLLASGGGTADRCIR 709
+ H G+ D +R
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 710 FWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHS 769
W+ TGQ + + + G + VW T T + L GH+
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVV---SGAYDFMVKVWDPETETCLHTLQGHT 177
Query: 770 YRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
RV + DG +V+G+ D ++R W+V
Sbjct: 178 NRVYS--LQFDGIHVVSGSLDTSIRVWDV 204
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.8 bits (156), Expect = 1e-11
Identities = 47/241 (19%), Positives = 83/241 (34%), Gaps = 16/241 (6%)
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDR 617
+T + + GN + G+ ++VW K + LVGHT V + ++
Sbjct: 20 ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI----IISG 73
Query: 618 MILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY 677
+ E + + + SG D L VW++ + L
Sbjct: 74 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL 133
Query: 678 TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHS 737
H+AAV+ + + A D ++ W+ T + + G +
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAY-----DFMVKVWDPETETCLHTL-QGHTNRVYSLQFDG 187
Query: 738 SELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
+VS G I VW T + LTGH M +V+G D T++ W+
Sbjct: 188 IHVVS--GSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVSGNADSTVKIWD 243
Query: 798 V 798
+
Sbjct: 244 I 244
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (98), Expect = 2e-04
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800
W+ L L GH V+ + G IV+G+ D TL+ W+ +
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT 46
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.0 bits (190), Expect = 3e-16
Identities = 50/301 (16%), Positives = 91/301 (30%), Gaps = 60/301 (19%)
Query: 545 VTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALA 604
+ R+ S V + ++ + G +++WD + + L GHT V L
Sbjct: 5 LQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 605 WNGDMLSSGSRDRMILQRDVR--------------------------------------- 625
++ ++ +GS D + DV
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVK 685
+ R V D++Y+ S D + VWN + ++T H +
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 182
Query: 686 AIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745
+ + G++D IR W+ + C+ L G
Sbjct: 183 CLQYRDRL-----VVSGSSDNTIRLWDI---ECGACLRVLEGHEELVRCIRFDNKRIVSG 234
Query: 746 YSQNQILVWKYPTLTQ---------VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796
+I VW + L HS RV + D IV+ + D+T+ W
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIW 292
Query: 797 N 797
+
Sbjct: 293 D 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.2 bits (136), Expect = 3e-09
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580
+ + ++S + +W+ T + + +G+ R LV G+ ++
Sbjct: 146 FDDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 201
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSE-------R 633
+WD+ + L GH V + ++ + SG+ D I D+ R
Sbjct: 202 LWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 261
Query: 634 RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
LV H V L++ D + S +D+ + +W+
Sbjct: 262 TLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.0 bits (120), Expect = 2e-07
Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 37/187 (19%)
Query: 647 WSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH-------------- 692
D+Q + SG DN + +W+ +++ + T H +V + +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVW 80
Query: 693 ---------------------HHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNL 731
+ DR I W+ + +
Sbjct: 81 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 140
Query: 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
+ I VW T V L GH + + +V+G+ D
Sbjct: 141 VNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC--LQYRDRLVVSGSSDN 198
Query: 792 TLRFWNV 798
T+R W++
Sbjct: 199 TIRLWDI 205
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (186), Expect = 2e-15
Identities = 53/286 (18%), Positives = 90/286 (31%), Gaps = 13/286 (4%)
Query: 519 VDWSSQ-NVLSVGLGSCVYLWSACTS---QVTRLCDLSADGNSVTSVAWNERGNLVAVGT 574
V S+ + G CV +W D N + S G + VG
Sbjct: 57 VTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116
Query: 575 HHGYVQVWDVSVAKQVHKLVGHTARVGAL--AWNGDMLSSGSRDRMILQRDVRTPNSQSE 632
+ +WD++ K ++ A + D S N
Sbjct: 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176
Query: 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH 692
R+ GH + S D L +GG DN + W+ + + + ++ + P
Sbjct: 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD-LREGRQLQQHDFTSQIFSLGYCPT 235
Query: 693 HHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752
G + + Q S V +L ++ VS N +
Sbjct: 236 GEW---LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--TGKDNLLN 290
Query: 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
W+ P + + S VL +S D + IVTG+GD+ + V
Sbjct: 291 AWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.3 bits (165), Expect = 7e-13
Identities = 58/269 (21%), Positives = 98/269 (36%), Gaps = 16/269 (5%)
Query: 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL-----VGHTARVGALAW--NG 607
G V +V + V G G V+VWD+S + + + + +G
Sbjct: 51 GEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 608 DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
L G + D+ P + + L L SPD++ S +D + VW+
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 727
LH+ + ++ + H I S L G D +R W+ G+ +Q D SQ
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG---LDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 728 VCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTG 787
+ +L + L S + + +L H VL L + G+ V+
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVE---VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 788 AGDETLRFWNV--FSKVRSQRESKSVLNL 814
D L W + + +ES SVL+
Sbjct: 284 GKDNLLNAWRTPYGASIFQSKESSSVLSC 312
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.1 bits (149), Expect = 8e-11
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLL 697
H V LK++ ++ S G DN L W + + ++ ++V + S +
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDK-YI 321
Query: 698 ASGGGTADRCIRFWNTL 714
+G G D+ + +
Sbjct: 322 VTGSG--DKKATVYEVI 336
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.0 bits (120), Expect = 3e-07
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 6/136 (4%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE-----HL 681
P + + H + VC + S +++ +GG + VW++ ++
Sbjct: 39 PRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD 97
Query: 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741
+++ P L+ G + + + LA S S
Sbjct: 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 157
Query: 742 STHGYSQNQILVWKYP 757
S +
Sbjct: 158 SCCSDGNIAVWDLHNQ 173
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (92), Expect = 8e-04
Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 10/119 (8%)
Query: 645 LKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704
+ D Q + L + + H V A+ S + +GG
Sbjct: 15 FHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTR-HVYTGG--- 70
Query: 705 DRCIRFWNTLTGQPMQCVDT------GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757
C++ W+ V + + + L+ S I P
Sbjct: 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 74.1 bits (180), Expect = 1e-14
Identities = 27/284 (9%), Positives = 73/284 (25%), Gaps = 22/284 (7%)
Query: 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591
G + ++ T + + + + +V ++ + G V + D+ K
Sbjct: 65 GDFLGIYDYRTGKAEKFEE---NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121
Query: 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQS---------ERRLVGHRQEV 642
A + + + +
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 181
Query: 643 CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702
+ D++ L + + ++ + I SP+ L+
Sbjct: 182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMT 241
Query: 703 TADRCIRFWNTLTGQPMQCVDTGSQVCNLA--------WSKHSSELVSTHGYSQNQILVW 754
+ + VD G + E + + + + ++
Sbjct: 242 SEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLL 301
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
KY T+ K+T + L +S D + ++ D + + +
Sbjct: 302 KYDVKTR--KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 57.6 bits (137), Expect = 3e-09
Identities = 19/216 (8%), Positives = 56/216 (25%), Gaps = 13/216 (6%)
Query: 606 NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND--NRL 663
+GD+++ SR + +Q S + V + ++ D + G + L
Sbjct: 14 DGDLIAFVSRGQAFIQ-----DVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFL 68
Query: 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723
+++ + + + E+L V A+ + + + + + +
Sbjct: 69 GIYDYRT-GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 127
Query: 724 TG-----SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMS 778
+ + Q + ++ T + A
Sbjct: 128 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD 187
Query: 779 PDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLNL 814
D + + + + S +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 54.1 bits (128), Expect = 3e-08
Identities = 21/170 (12%), Positives = 46/170 (27%), Gaps = 20/170 (11%)
Query: 521 WSSQNVLSVGLGSCVYLWSACTSQ-----VTRLCDLSADGNSVTSVAWNERGNLVAVGTH 575
S+N+ + S V++ + S R G +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247
Query: 576 HG-------YVQVWDVSVAKQVHKLVGHTARVGALAWNGD--MLSSGSRDRMILQRDVRT 626
D + + L ++L+ DV+T
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676
R++ + + L+ S D + + +D ++Y + L +T
Sbjct: 308 ------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 50.6 bits (119), Expect = 5e-07
Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 20/246 (8%)
Query: 567 GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGD---MLSSGSRDRMILQRD 623
G+L+A G + DVS + V R+ + GD G+R+ L
Sbjct: 15 GDLIAF-VSRGQAFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLG-- 69
Query: 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA 683
+ + + + V + + ++ + + +L + P A
Sbjct: 70 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM 129
Query: 684 VKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736
+ S + + + I ++ + S A+
Sbjct: 130 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD 189
Query: 737 SSELVSTHGYS-----QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
S L S +L + + +++ + + P G D
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 792 TLRFWN 797
+
Sbjct: 250 NDMYKR 255
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.2 bits (92), Expect = 8e-04
Identities = 14/161 (8%), Positives = 45/161 (27%), Gaps = 13/161 (8%)
Query: 647 WSP-DNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705
+SP D +A + ++ ++ L+ ++ + + G
Sbjct: 10 FSPLDGDLIAFVSRG-QAFIQDVSGTYVLK--VPEPLRIRYVRRGG-DTKVAFIHGTREG 65
Query: 706 RCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ---- 761
+ ++ TG+ + + V + ++ V + + + + T
Sbjct: 66 DFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 125
Query: 762 ----VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
+ T P G + + +++
Sbjct: 126 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 166
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 72.7 bits (177), Expect = 4e-14
Identities = 23/315 (7%), Positives = 58/315 (18%), Gaps = 42/315 (13%)
Query: 497 ISRIPFKVLDAPELQDDF-YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDL---- 551
+ L L S V ++ T +L
Sbjct: 59 LGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118
Query: 552 -SADGNSVTSVAWNERGNLVAVGTH-HGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDM 609
+ G V + + V A +
Sbjct: 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASC-FHIHPGAAAT 177
Query: 610 LSSGSRDRMILQRDVRTPNSQ----SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYV 665
GS + D+ + + + + + + +
Sbjct: 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGD 237
Query: 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725
+ + + KA + ++A + T+
Sbjct: 238 IPAAGATMKAAIDGNESGRKADNFRSAGFQMVA---KLKNTDGIMILTVEHS-------- 286
Query: 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE--A 783
+ + ++ + + + + DG
Sbjct: 287 ----------------RSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDN 329
Query: 784 IVTGAGDETLRFWNV 798
AG E L ++
Sbjct: 330 YANSAGTEVLDIYDA 344
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 71.4 bits (173), Expect = 7e-14
Identities = 33/308 (10%), Positives = 83/308 (26%), Gaps = 38/308 (12%)
Query: 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDV 584
+L+ + + V ++ ++ G + G + + D+
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 585 SVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRT----------------PN 628
+ + ++ T + G LS + I + VR
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIA 688
+ S R+ +++ L W+ D L G D + ++ + A A
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQP 183
Query: 689 WSPHHHGLLASGG------------------GTADRCIRFWNTLTGQPMQCVDTGSQVCN 730
S G + + TG+ V
Sbjct: 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243
Query: 731 LAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD 790
+ + + ++ + + N + + + ++ + + +S DG + G
Sbjct: 244 FSTAVNPAK--TRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGAL 300
Query: 791 ETLRFWNV 798
L ++
Sbjct: 301 GDLAAYDA 308
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 55.2 bits (131), Expect = 1e-08
Identities = 23/247 (9%), Positives = 60/247 (24%), Gaps = 5/247 (2%)
Query: 446 VIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKISRIPFKVL 505
SPD + L Y + P ++ ++ ++ + +
Sbjct: 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG 146
Query: 506 DAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNS-VTSVAWN 564
+ + V + S A + + G
Sbjct: 147 SKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR 206
Query: 565 ERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWNGDMLSSGSRDRMILQRD 623
+ + + + D+ + + V + A N + ++ D
Sbjct: 207 KDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFD 266
Query: 624 VRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA 683
+ + + V + S D + GG L ++ ++ A
Sbjct: 267 LEK---NASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNA 323
Query: 684 VKAIAWS 690
++A
Sbjct: 324 SMSLASV 330
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 52.5 bits (124), Expect = 9e-08
Identities = 24/206 (11%), Positives = 47/206 (22%), Gaps = 19/206 (9%)
Query: 608 DMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVW 666
D + + +R ++ D + +P + A+ L
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 667 NLHSMSPLQTYTEHLAAVK-----AIAWSPHHHGLLASGGGTADR---------CIRFWN 712
+L + L + A SP L + ++
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 713 TLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRV 772
T + + Q+ LAW++ S+L V T V S+
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLH----VMDPEAGTLVEDKPIQSWEA 177
Query: 773 LYLAMSPDGEAIVTGAGDETLRFWNV 798
A +
Sbjct: 178 ETYAQPDVLAVWNQHESSGVMATPFY 203
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 51.3 bits (121), Expect = 2e-07
Identities = 23/172 (13%), Positives = 49/172 (28%), Gaps = 19/172 (11%)
Query: 652 QYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709
Y+ + ++L V + M+ + T + +P A+ +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLV 59
Query: 710 FWNTLTGQPMQCVDTGSQVCN---------------LAWSKHSSELVSTHGYSQNQILVW 754
+ +TG+ + +D + LA + L TH Q +
Sbjct: 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806
K ++ LA + DG + D + + V +
Sbjct: 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP 171
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 35/292 (11%), Positives = 71/292 (24%), Gaps = 24/292 (8%)
Query: 446 VIFSPDRRNLF--------QYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPRKATRKI 497
+ +P R + + + + SP T I
Sbjct: 39 PMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAI 98
Query: 498 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNS 557
P ++ + L D + + A ++L L D +
Sbjct: 99 YESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLH- 157
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVG-----ALAWNGDMLSS 612
V E G LV + ++ V + D
Sbjct: 158 ---VMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214
Query: 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672
+ +L D+ T R + +P N L ++L +
Sbjct: 215 TAYRTGLLTMDLETGEMAM-REVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNA 271
Query: 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT 724
++ + ++ S + GG A + ++ T + VD
Sbjct: 272 SIKR-VPLPHSYYSVNVSTDGS-TVWLGG--ALGDLAAYDAETLEKKGQVDL 319
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.0 bits (164), Expect = 9e-13
Identities = 30/280 (10%), Positives = 78/280 (27%), Gaps = 28/280 (10%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV---GHTARVGALAWNG 607
A + ++ + +L+ + + G + V+ + + L+ + + +
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 608 D---MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664
+ + G+ IL+ D+ S + L + D +
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALT-NNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG---GTADRCIRFWNTLTGQPMQC 721
V + + ++L + + S G + ++++ +
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 722 VDTGSQVCNLAWSKHSS------------------ELVSTHGYSQNQILVWKYPTLTQVA 763
S + E G N + +
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245
Query: 764 KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803
K T +Y V + SP + + T D + WN+ ++ +
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 2/108 (1%)
Query: 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671
D + + + V +++SP +++L + G+D + WNL +
Sbjct: 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283
Query: 672 SPLQTYTEHLAAVKAIAWSPHHHGLL-ASGGGTADRCIRFWNTLTGQP 718
++ + + + + + L A+ T T+
Sbjct: 284 KKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNA 330
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 1e-05
Identities = 23/185 (12%), Positives = 46/185 (24%), Gaps = 26/185 (14%)
Query: 605 WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVG--HRQEVCGLKWSPDNQYLASGGNDNR 662
N L G + + + + Q + + A D R
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217
Query: 663 LYVWNLHS---------------MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707
+ V T V +I +SP H L +G D
Sbjct: 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS---DGI 274
Query: 708 IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767
I WN T + ++ ++ + + + L + T +
Sbjct: 275 ISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSD--DTFKTNAAIDQT----IEL 328
Query: 768 HSYRV 772
++ +
Sbjct: 329 NASSI 333
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 9e-04
Identities = 9/88 (10%), Positives = 21/88 (23%), Gaps = 7/88 (7%)
Query: 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN----TLTGQPMQCVDTGS 726
M +Q + I P LL D + + +Q +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKS-LLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKH 57
Query: 727 QVCNLAWSKHSSELVSTHGYSQNQILVW 754
+ + ++ + + V
Sbjct: 58 PLLCCNFIDNTDLQIYVGTVQGEILKVD 85
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.0 bits (164), Expect = 1e-12
Identities = 40/362 (11%), Positives = 96/362 (26%), Gaps = 72/362 (19%)
Query: 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG-----------NSVTSVAWNERG 567
V + +S + +W D S
Sbjct: 20 VSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFEL 79
Query: 568 NLVAVGTHHGYVQVWDVSVAKQVHKLVGHT----------ARVGALAWNGD-------ML 610
LVA + G + + ++ + K++ AL W L
Sbjct: 80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 139
Query: 611 SSGSRDRMILQRDVRTPNSQ----------------SERRLVGHRQEVCGLKWSPDNQYL 654
+ + + + Q + S +
Sbjct: 140 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 198
Query: 655 ASGGNDNRLYVWN------LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCI 708
A+G N+ + + L++ + + +++++ +SP L + + CI
Sbjct: 199 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI 258
Query: 709 RFWNTLTGQPMQCVDTGSQ--------------VCNLAWSKHSSELVSTHGYSQNQILVW 754
+ T G+ + + + V +L+++ L ++ W
Sbjct: 259 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC--SAGWDGKLRFW 316
Query: 755 KYPTLTQVAKLTGHSYRVLY----LAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKS 810
T ++ L H + LA+ G+++ G ++F + +
Sbjct: 317 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP-GVFDVKFLKKGWRSGMGADLNE 375
Query: 811 VL 812
L
Sbjct: 376 SL 377
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.9 bits (143), Expect = 6e-10
Identities = 23/228 (10%), Positives = 57/228 (25%), Gaps = 31/228 (13%)
Query: 581 VWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSER----RLV 636
+ + K H A + +++ S S D + D + ++++ +
Sbjct: 4 IATANAGK------AHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF 57
Query: 637 GHRQEV-------CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAW 689
H+ + + + + +A+ L + + + +
Sbjct: 58 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM 117
Query: 690 SPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQN 749
H L G V + + S ++ +
Sbjct: 118 KKHSFWALKWGASNDRLLSHRLVATD------VKGTTYIWKFHPFADESNSLTLN----- 166
Query: 750 QILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797
V S + +S G I TG + T++
Sbjct: 167 --WSPTLELQGTVESPMTPSQFATSVDISERGL-IATGFNNGTVQISE 211
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.5 bits (142), Expect = 8e-10
Identities = 39/310 (12%), Positives = 84/310 (27%), Gaps = 73/310 (23%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------QVHKLVGHTARVGALAW---- 605
+ SV+ + + GY++VWD + + + H + + +
Sbjct: 15 ADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAI 72
Query: 606 -----NGDMLSSGSRDRMILQRDVRTPNSQSE--------RRLVGHRQEVCGLKWSPD-- 650
++++ S +L + + + + LKW
Sbjct: 73 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132
Query: 651 ---NQYLASGGNDNRLYVWNLHSMSP------------------LQTYTEHLAAVKAIAW 689
+ L + Y+W H + +++ ++
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192
Query: 690 SPHHHGLLASGGGTADRCIR---FWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-- 744
S GL+A+G + ++ + + N S S S
Sbjct: 193 SER--GLIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 745 GYSQNQILVWKY----------------PTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 788
+ N + HS V+ L+ + GE + +
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308
Query: 789 GDETLRFWNV 798
D LRFW+V
Sbjct: 309 WDGKLRFWDV 318
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.1 bits (159), Expect = 4e-12
Identities = 38/205 (18%), Positives = 66/205 (32%), Gaps = 3/205 (1%)
Query: 558 VTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRD 616
+T + + N V G ++V+D K + +L GH V AL + +G +L SGS D
Sbjct: 16 ITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTD 73
Query: 617 RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676
R + D++ + + +Y+ +G DN L+VW L S +
Sbjct: 74 RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD 133
Query: 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736
+ E + + G D V ++A K
Sbjct: 134 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC 193
Query: 737 SSELVSTHGYSQNQILVWKYPTLTQ 761
L + I +
Sbjct: 194 LYILSGHTDRIYSTIYDHERKRCIS 218
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 64.1 bits (154), Expect = 2e-11
Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 4/145 (2%)
Query: 635 LVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694
L GH V ++ Y+ +G +D + V++ + L + H V A+ ++
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--G 64
Query: 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754
G+L SG + + + C + + + G N + VW
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI-VTGSRDNTLHVW 123
Query: 755 KYPTLTQVAKLTGHSYRVLYLAMSP 779
K P + V L
Sbjct: 124 KLPKESSVPDHGEEHDYPLVFHTPE 148
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.0 bits (107), Expect = 1e-05
Identities = 37/302 (12%), Positives = 80/302 (26%), Gaps = 32/302 (10%)
Query: 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGY 578
+ + V++ + ++ + + L LS V ++ + G LV+ T
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKF--LLQLSGHDGGVWALKYAHGGILVSGSTDRTV 76
Query: 579 VQVWDVSVAKQVHKLVGHTARVGALAWNGDMLS---SGSRDRMILQRDVRTPNSQSERRL 635
++ + +GSRD + + +S +
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 636 VGHRQEVCGLKWSPDNQ-------------------YLASGGNDNRLYVWNLHSMSPLQT 676
V + SG DN L VW++ M L
Sbjct: 137 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196
Query: 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736
+ H + + + + D IR W+ G+ M + + + L
Sbjct: 197 LSGHTDRIYSTIYDHERKRC---ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD 253
Query: 737 SSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFW 796
+ + S Y H + + + I+ + +
Sbjct: 254 KFLVSAAADGSIRGWDANDYSRKFSY-----HHTNLSAITTFYVSDNILVSGSENQFNIY 308
Query: 797 NV 798
N+
Sbjct: 309 NL 310
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (101), Expect = 5e-05
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ-TYTEHLAAVKAIAWSPHHHGL 696
H + + + + G++N+ ++NL S + + + ++ + L
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTL 337
Query: 697 LASGGGTADRCIRFWN 712
+A+ + +
Sbjct: 338 VAAVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.6 bits (98), Expect = 1e-04
Identities = 42/303 (13%), Positives = 87/303 (28%), Gaps = 36/303 (11%)
Query: 519 VDWSSQNVL-SVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG 577
+ ++ +L S V +W T + + + + + G+
Sbjct: 59 LKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 578 YVQVWDVSVAKQVHKLVG-----------------------HTARVGALAWNGDMLSSGS 614
+ VW + V H A V ++ +G+++ SGS
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 615 RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL 674
D ++ DV + L GH + + + + S D + +W+L + +
Sbjct: 179 YDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236
Query: 675 QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWS 734
T H AD IR W+ + +
Sbjct: 237 YTLQGH-----TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 735 KHSSELVSTHGYSQNQILVWKYPTLTQV-AKLTGHSYRVLYLAMSPDGEAIVTGAGDETL 793
+ LVS S+NQ ++ + V A + + ++ + + D
Sbjct: 292 VSDNILVSG---SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQS 347
Query: 794 RFW 796
Sbjct: 348 FLE 350
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (95), Expect = 3e-04
Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 12/247 (4%)
Query: 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571
D L++ ++ + Y T + G+ + + GN+V
Sbjct: 116 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVV 175
Query: 572 VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQS 631
G++ + VWDV+ K ++ L GHT R+ + ++ + S R N +
Sbjct: 176 SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235
Query: 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSP 691
L GH V L+ S A + + + ++ H + AI
Sbjct: 236 MYTLQGHTALVGLLRLSDKFLVSA----AADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 692 HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG--SQVCNLAWSKHSSELVSTHGYSQN 749
+L SG + +N +G+ + Q+ ++ + LV+
Sbjct: 292 VSDNILVSGS---ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAA-VEKDG 345
Query: 750 QILVWKY 756
Q +
Sbjct: 346 QSFLEIL 352
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 66.4 bits (161), Expect = 5e-12
Identities = 29/261 (11%), Positives = 71/261 (27%), Gaps = 21/261 (8%)
Query: 577 GYVQVWDVSVAKQVHKL-VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRL 635
G + + D S + L G+ + L+ +G L RD + D+ + +
Sbjct: 42 GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 101
Query: 636 ---VGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEHLAAV------- 684
R +++Y A + + + ++ P + +
Sbjct: 102 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP 161
Query: 685 ----KAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSEL 740
AI S + + + T + + L + + +
Sbjct: 162 EPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 221
Query: 741 VSTHGYSQNQILVW----KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA-GDETLRF 795
++ +++ K + T H R G T GD+++
Sbjct: 222 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVAL 281
Query: 796 WNVFSKVRSQRESKSVLNLFS 816
+ K + + +
Sbjct: 282 IGTDPEGHPDNAWKILDSFPA 302
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 41.7 bits (97), Expect = 3e-04
Identities = 20/179 (11%), Positives = 45/179 (25%), Gaps = 19/179 (10%)
Query: 636 VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH-HH 694
R W +N + + + ++ + + + AV S +
Sbjct: 17 PEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRY 75
Query: 695 GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSE---LVSTHGYSQNQI 751
+ G + + + + GS+ ++ SK Y Q
Sbjct: 76 LFVIGRDGKVN--MIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133
Query: 752 LVW-----------KYPTLTQVAKLTGHSYRVLYLAMSPDG-EAIVTGAGDETLRFWNV 798
++ +T + RV + S E IV + +
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 192
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 41.7 bits (97), Expect = 3e-04
Identities = 32/295 (10%), Positives = 64/295 (21%), Gaps = 32/295 (10%)
Query: 537 LWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVH---- 591
LW + V + S + TS + D +
Sbjct: 90 LWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 149
Query: 592 -------KLVGHTARVGALAWNGD---MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE 641
+ RV A+ + + + IL D N+ + R
Sbjct: 150 RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF- 208
Query: 642 VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPH----HHGLL 697
+ ++Y + N V L + + G +
Sbjct: 209 LHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV 268
Query: 698 ASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYP 757
+ D + T P D ++ N ++
Sbjct: 269 WATSHMGDDSVALIGT---DPEGHPDNAWKIL--DSFPALGGGSLFIKTHPNSQYLY--- 320
Query: 758 TLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVL 812
A L + +A D +A+ D + + V+
Sbjct: 321 ---VDATLNPEAEISGSVA-VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 371
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 65.2 bits (157), Expect = 9e-12
Identities = 34/311 (10%), Positives = 75/311 (24%), Gaps = 57/311 (18%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV----------GTHHGYVQVWDV 584
++ +V DG + + + G+ +A G YV+V+D
Sbjct: 30 QFVIDGEAGRVIG----MIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 85
Query: 585 SVAKQVHKLVGHTARVGALAWNGDMLS-----------SGSRDRMILQRDVRTPN----- 628
+ A + M S S + D+
Sbjct: 86 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 145
Query: 629 SQSERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHSMSPLQTYTEHLAAVKAI 687
+ + D + + + P +
Sbjct: 146 DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE-----DEFLINHP 200
Query: 688 AWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCN---LAWSKHS 737
A+S L+ + +F + G + +A+ +
Sbjct: 201 AYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260
Query: 738 SEL--------VSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE--AIVTG 787
+ H + ++V T ++AK + + +S D +
Sbjct: 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALS 319
Query: 788 AGDETLRFWNV 798
GD+TL +
Sbjct: 320 TGDKTLYIHDA 330
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 63.3 bits (152), Expect = 3e-11
Identities = 32/297 (10%), Positives = 72/297 (24%), Gaps = 31/297 (10%)
Query: 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTR-----LCDLSADGNSVTSVAWNERGNL 569
++ + V ++ T T G + G
Sbjct: 60 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT 119
Query: 570 V--AVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTP 627
+ + V V D+ L D RD + + T
Sbjct: 120 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTE 178
Query: 628 NSQSERRL----VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP--LQTYTEHL 681
+ + +S L +++ +L S L
Sbjct: 179 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT 238
Query: 682 AAVKAIAWSPHHHGLLASGG-----------------GTADRCIRFWNTLTGQPMQCVDT 724
A +A W P +A TA R + + TG+ + +
Sbjct: 239 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM 298
Query: 725 GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDG 781
G ++ ++ S+ L+ + + + ++ + + + + G
Sbjct: 299 GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.6 bits (150), Expect = 5e-11
Identities = 32/266 (12%), Positives = 67/266 (25%), Gaps = 20/266 (7%)
Query: 556 NSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQ--VHKLVGH-TARVGALAW----NG 607
N T ++++ N +A +V+ D +K V + GH ++ V + +
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 608 DMLSSGSRDRMILQRDVRTPNSQSERRLV------GHRQEVCGLKWSPDNQYLASGGN-- 659
L SG ++ + + + + W + + L G
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 660 DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719
DN + S + L + H + A + G
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 720 QCVDTGSQVCNLA----WSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYL 775
+ + L + ++
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 776 AMSPDGEAIVTGAGDETLRFWNVFSK 801
D + T D T+R W+V +
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTS 283
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.5 bits (116), Expect = 7e-07
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHG 695
Q D+Q A+ G D + VW++ + +Q +T + + + +G
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 309
Query: 696 LLASGGGTADRCIRFWN 712
+ S D + F+
Sbjct: 310 RIISLS--LDGTLNFYE 324
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.8 bits (114), Expect = 2e-06
Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 16/148 (10%)
Query: 638 HRQEVCGLKWSPDNQYLASG-GNDNRLYVWNLHSMS--PLQTYTEHL-AAVKAIAWSPHH 693
R L + P +A G + + P+ +T H + V + +SP
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 694 HG-LLASGGGTADRCIRFWNTLTGQPMQCVDT---------GSQVCNLAWSKHSSELVST 743
L SG + W + V+ + +++W L
Sbjct: 76 GSQYLCSGD--ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133
Query: 744 HGYSQNQILVWKYPTLTQVAKLTGHSYR 771
N + + + + +++GHS R
Sbjct: 134 GEGRDNFGVFISWDSGNSLGEVSGHSQR 161
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (95), Expect = 3e-04
Identities = 11/65 (16%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Query: 605 WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPD-NQYLASGGNDNRL 663
+ ++ D I DV T + L + + N + S D L
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320
Query: 664 YVWNL 668
+ L
Sbjct: 321 NFYEL 325
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 60.7 bits (145), Expect = 2e-10
Identities = 33/255 (12%), Positives = 68/255 (26%), Gaps = 9/255 (3%)
Query: 552 SADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDM 609
+ + G+ + V V H+ + +G
Sbjct: 14 RTARGTAVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 72
Query: 610 LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669
+SG + D + + V + W +++ +A+ G +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 132
Query: 670 SMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729
+ A + G+ D + + + ++
Sbjct: 133 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 192
Query: 730 NLAWSKHSSELVSTHGYSQNQILV------WKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783
+ L ++ G +L K HS V L SPDG
Sbjct: 193 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 252
Query: 784 IVTGAGDETLRFWNV 798
I + + D+T++ WNV
Sbjct: 253 IASASADKTIKIWNV 267
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.8 bits (127), Expect = 3e-08
Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 15/284 (5%)
Query: 525 NVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYV--QVW 582
+ + G+ VY + T + + + T + G A G HG V
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEI--YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87
Query: 583 DVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEV 642
+ + + V ++W+ + + + Q
Sbjct: 88 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR 147
Query: 643 CGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGG 702
+ + + P + + K + ++
Sbjct: 148 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 207
Query: 703 TADRCIRFWNTLTGQPMQ--------CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVW 754
D I +N + G V V L WS +++ S + I +W
Sbjct: 208 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS--ASADKTIKIW 265
Query: 755 KYPTLTQVAKLTGHS-YRVLYLAMSPDGEAIVTGAGDETLRFWN 797
TL + + L + +A+V+ + + + F N
Sbjct: 266 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.7 bits (93), Expect = 5e-04
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 605 WNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664
+G ++S S D+ I +V T + VG R E L Q L S + +
Sbjct: 248 PDGTKIASASADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306
Query: 665 VWNL 668
N
Sbjct: 307 FVNP 310
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 60.1 bits (144), Expect = 3e-10
Identities = 23/313 (7%), Positives = 63/313 (20%), Gaps = 43/313 (13%)
Query: 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDV 584
++ + +++ + V + C + D + V H+G + D+
Sbjct: 11 MIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 69
Query: 585 SVAKQVHKLV--------------------GHTARVGALAWNGDMLSSGSRDRMILQRDV 624
K G + +
Sbjct: 70 DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 129
Query: 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ--------- 675
R ++V ++ + D +G + ++ V L
Sbjct: 130 ADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGY 189
Query: 676 ----------TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG 725
+ + + TG+
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 249
Query: 726 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV 785
+ + + N++ + + + +A G+ +
Sbjct: 250 LTELYFTGLRSPKDPNQIY-GVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLY 307
Query: 786 TGAGDETLRFWNV 798
G L +N
Sbjct: 308 LGGTFNDLAVFNP 320
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 59.0 bits (141), Expect = 8e-10
Identities = 25/182 (13%), Positives = 52/182 (28%), Gaps = 12/182 (6%)
Query: 644 GLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGG 702
G ++Y+ N L+V ++ S + ++ +P +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 703 TADRCIRFWNTLTGQPMQCV-------DTGSQVCNLAWSKHSSELVSTHGYSQNQILV-- 753
I + T + + G + + A S E+ +T +Q
Sbjct: 61 --YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 754 WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRESKSVLN 813
K P L + G + + P ++ A D +L + K +
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 814 LF 815
L
Sbjct: 179 LP 180
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 48.6 bits (114), Expect = 2e-06
Identities = 28/239 (11%), Positives = 62/239 (25%), Gaps = 34/239 (14%)
Query: 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG 573
Y + N V + ++S + V + + G+L G
Sbjct: 103 VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG 162
Query: 574 THHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML----------------------- 610
+ V + + + R G A +
Sbjct: 163 PDIYKMDVKTGKYTVALP--LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 220
Query: 611 ---SSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667
++ L D++T + + + + SP + G NRL ++
Sbjct: 221 QDPATADLLYGYLSVDLKTGKTHT-QEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYD 278
Query: 668 LHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726
L ++ +A+ L GG + +N T + ++ +
Sbjct: 279 LKQRKLIKAA-NLDHTYYCVAFDKKGD-KLYLGG--TFNDLAVFNPDTLEKVKNIKLPG 333
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 47.4 bits (111), Expect = 4e-06
Identities = 23/238 (9%), Positives = 61/238 (25%), Gaps = 10/238 (4%)
Query: 446 VIFSPDRRNLFQYLPAPESRMNIEATSPYSLSPVGPKSQKLLRSPR--KATRKISRIPFK 503
SPD + ++ + + + P L + R R++ +
Sbjct: 94 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 153
Query: 504 VLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG---NSVTS 560
+ + + + + +++ L + + + S T
Sbjct: 154 DDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 213
Query: 561 VAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTAR--VGALAWNGDMLSSGSRDRM 618
+ + A D+ K + L D
Sbjct: 214 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR 273
Query: 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT 676
+ + D++ + + + + L GG N L V+N ++ ++
Sbjct: 274 LAKYDLKQ---RKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 328
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 38.2 bits (87), Expect = 0.003
Identities = 9/82 (10%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 512 DDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA 571
+ Y + G+ + + + ++ + +L ++ VA++++G+ +
Sbjct: 251 TELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANL---DHTYYCVAFDKKGDKLY 307
Query: 572 VGTHHGYVQVWDVSVAKQVHKL 593
+G + V++ ++V +
Sbjct: 308 LGGTFNDLAVFNPDTLEKVKNI 329
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 58.8 bits (140), Expect = 8e-10
Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 1/126 (0%)
Query: 632 ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE-HLAAVKAIAWS 690
++ GH + + L S D + L S + + W++ + + + + H + I +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 691 PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQ 750
S + + SQ LA S V+
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124
Query: 751 ILVWKY 756
K
Sbjct: 125 YSHGKL 130
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.8 bits (127), Expect = 3e-08
Identities = 31/285 (10%), Positives = 73/285 (25%), Gaps = 42/285 (14%)
Query: 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWNGDM--LSS 612
++T+++ + G + G++ WD+S H + + +
Sbjct: 13 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV 72
Query: 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672
D + + + S+ + GL S D + + +
Sbjct: 73 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTE 132
Query: 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGG----TADRCIRFWNTLTGQPMQCVDTGSQV 728
+Y A+ G + A + + +
Sbjct: 133 VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA 192
Query: 729 CNLAWSKHSSELVSTH---------------------------------GYSQNQILVW- 754
+A + + + G N ++VW
Sbjct: 193 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN 252
Query: 755 -KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
P+ + H+ + + + IV+ D ++FWNV
Sbjct: 253 MNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.8 bits (88), Expect = 0.002
Identities = 7/34 (20%), Positives = 17/34 (50%)
Query: 765 LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
GH+ + L+ S DG+ + + + + W++
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 54.9 bits (130), Expect = 1e-08
Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 8/266 (3%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKL 593
+ + +++VT + G++ + G V V H V + D + V
Sbjct: 14 ISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSIIDTA-TNNVIAT 69
Query: 594 VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY 653
V + +A + D + V S + V + GL SPD +
Sbjct: 70 VPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKK 129
Query: 654 LASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNT 713
L N ++ + + K IA +P + + + + T
Sbjct: 130 LYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189
Query: 714 LTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVL 773
+ V+ + + + + N + + T A++
Sbjct: 190 NSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNKITARIPVGP-DPA 247
Query: 774 YLAMSPDGE-AIVTGAGDETLRFWNV 798
+A++PDG+ V + T+ +
Sbjct: 248 GIAVTPDGKKVYVALSFCNTVSVIDT 273
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.1 bits (120), Expect = 2e-07
Identities = 19/134 (14%), Positives = 39/134 (29%), Gaps = 2/134 (1%)
Query: 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593
L + ++ + + ++ + + +
Sbjct: 154 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW 213
Query: 594 VGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY 653
D++++GS D I V+ P + + L H+ V L W +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP-MKIIKALNAHKDGVNNLLWETPS-T 271
Query: 654 LASGGNDNRLYVWN 667
L S G D + WN
Sbjct: 272 LVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.8 bits (114), Expect = 1e-06
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 638 HRQEVCGLKWSPDNQYLASGGNDNRLYVWNL-HSMSPLQTYTEHLAAVKAIAWSPHHHGL 696
E + + +A+G D ++++++ M ++ H V + W
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP--ST 271
Query: 697 LASGGGTADRCIRFWNTL 714
L S G AD CI+ WN +
Sbjct: 272 LVSSG--ADACIKRWNVV 287
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.1 bits (107), Expect = 9e-06
Identities = 34/288 (11%), Positives = 65/288 (22%), Gaps = 50/288 (17%)
Query: 551 LSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDML 610
+S +T++ N + G++ G + W S Q H+ + +L +
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNSKAQE 59
Query: 611 SSGSRDRMILQRDVRTPNSQSERRL--------------------------------VGH 638
S L+ + T + + V
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119
Query: 639 RQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLA 698
+ S + + + T A I+ SP + A
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179
Query: 699 SGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-------GYSQNQI 751
+ T G I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 752 LVWKYPTLTQVAK-LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798
++ ++ K L H V L +V+ D ++ WNV
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.6 bits (90), Expect = 0.001
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 588 KQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKW 647
+ + + GH + AL N L SGS D I++ + H + L
Sbjct: 4 EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWSSSS-------MHQDHSNLIVSLDN 54
Query: 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHH 694
S +Y + +D Q A +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD 101
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 49.6 bits (117), Expect = 1e-06
Identities = 34/318 (10%), Positives = 81/318 (25%), Gaps = 40/318 (12%)
Query: 518 LVDWSSQNVLSVGLGSC--VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH 575
L D N+ SV L + L + ++ ++ D G +V + G + V
Sbjct: 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT---GYAVHISRMSASGRYLLVIGR 81
Query: 576 HGYVQVWDVS-----VAKQVHKLVGHT------------ARVGALAWNGDMLSSGSRDRM 618
+ + D+ ++ + A A+ + + +
Sbjct: 82 DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141
Query: 619 ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL--ASGGNDNRLYVWNLHSMSPLQT 676
++ V T + + V + S ++ L V + T
Sbjct: 142 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 677 YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWS 734
+ W H + + + + + V
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261
Query: 735 KHSSELVSTHGYSQNQILV-------WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIV-- 785
+ ST I + +VA+L G L++ P +
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD 321
Query: 786 -----TGAGDETLRFWNV 798
+++ +++
Sbjct: 322 TTFNPDARISQSVAVFDL 339
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.1 bits (108), Expect = 1e-05
Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 7/178 (3%)
Query: 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT-----EHL 681
+S+ +++ V + S +YL G D R+ + +L + P + E
Sbjct: 49 GDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR 108
Query: 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV 741
+ + +A + T +P Q V T + +
Sbjct: 109 SVESSKFKGYEDRYTIAG--AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 166
Query: 742 STHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799
+ ++ + +V + L + + G D + R++
Sbjct: 167 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTA 224
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 42.9 bits (99), Expect = 1e-04
Identities = 21/162 (12%), Positives = 46/162 (28%), Gaps = 5/162 (3%)
Query: 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL-ASGGNDNRLYVWNLHS 670
+ + I ++ + + ++V +V + SPD +YL + R+ + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 671 MSPLQTYTEHLAAVKA---IAWSP-HHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726
T+ A + I+ + S R + L + V+
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH 768
+ S + L L VA+
Sbjct: 129 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 25/290 (8%), Positives = 64/290 (22%), Gaps = 26/290 (8%)
Query: 535 VYLWSACTSQVTRLCDLSADGNSVTSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKL 593
+++W+ L + V + + L V + ++
Sbjct: 16 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF 75
Query: 594 VGHTARVG-----ALAWNGDMLSSGSRDR--MILQRDVRTPNSQSERRLVGHRQEVCGLK 646
+A G + G + GS + + + R + G
Sbjct: 76 AAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANI 135
Query: 647 WSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKA------IAWSPHHHGLLASG 700
+ +R+ ++ + L + + P+
Sbjct: 136 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 195
Query: 701 GGTADRCIRFWNTLTGQ-----PMQCVDTGSQVCNLAWSKHSSELVSTH---GYSQNQIL 752
+ + G + + A H + + + I
Sbjct: 196 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 255
Query: 753 VWKYPTLTQVAKLTGHSYRVLY---LAMSPDGE-AIVTGAGDETLRFWNV 798
V+ V G + G+ I G + + +
Sbjct: 256 VFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Score = 41.8 bits (98), Expect = 3e-04
Identities = 45/247 (18%), Positives = 80/247 (32%), Gaps = 27/247 (10%)
Query: 555 GNSVTSVAWNERGNLVAVGT--HHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSS 612
++ + + G V + + +V + R+ A G+ +
Sbjct: 175 DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI 234
Query: 613 GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY-LASGGNDNRLYVWNLHSM 671
G ++ D R + + V GL SPD +Y +A+G + V + +
Sbjct: 235 GDSKVPVV--DGRGESEFTRYIPVPKN--PHGLNTSPDGKYFIANGKLSPTVSVIAIDKL 290
Query: 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNL 731
+ + + I P GL R + TL SQVC
Sbjct: 291 --DDLFEDKIELRDTIVAEPEL-GLGPLHTTFDGRG-NAYTTLFID--------SQVC-- 336
Query: 732 AWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791
W+ + + +G N I K Q GH++ L + DG+ +V +
Sbjct: 337 KWN-IADAIKHYNGDRVNYIRQ-KLDVQYQ----PGHNHASLTESRDADGKWLVVLSKFS 390
Query: 792 TLRFWNV 798
RF V
Sbjct: 391 KDRFLPV 397
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Length = 319 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/252 (9%), Positives = 66/252 (26%), Gaps = 22/252 (8%)
Query: 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NG 607
++S G + + ++ +G L + G + + + V H A A+ +G
Sbjct: 34 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG 93
Query: 608 DMLSSGSRDRMILQRDV-RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666
+ D T N + + ++ L++ + +
Sbjct: 94 RLFVCYLGDFKSTGGIFAATENGDNLQDIIED---------------LSTAYCIDDMVFD 138
Query: 667 NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS 726
+ + + + + + I N + + V +
Sbjct: 139 SKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV----TPIIQNISVANGIALSTDEKVLWVT 194
Query: 727 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVT 786
+ + + E + + + S LY+AM G +V
Sbjct: 195 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVF 254
Query: 787 GAGDETLRFWNV 798
+ +
Sbjct: 255 NKRGYPIGQILI 266
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 819 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.98 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.98 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.98 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.97 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.96 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.96 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.95 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.95 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.95 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.94 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.94 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.94 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.93 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.93 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.92 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.92 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.88 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.87 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.85 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.84 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.84 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.82 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.8 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.79 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.75 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.73 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.68 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.64 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.59 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.58 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.55 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.53 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.46 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.41 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.37 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.19 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.02 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.0 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.97 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.93 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.88 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.86 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.85 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.84 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.84 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.74 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.55 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.52 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.5 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.41 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.41 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.38 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.31 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.29 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.22 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.22 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.83 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.73 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.71 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.69 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.61 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.57 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.52 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.42 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.41 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.31 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.21 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.21 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.19 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.18 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.16 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.12 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.03 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.96 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.88 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.86 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.83 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.24 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 95.75 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 93.92 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 91.77 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 91.6 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 91.08 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 90.8 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 89.86 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 89.37 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 88.56 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 88.15 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 80.73 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-35 Score=313.68 Aligned_cols=277 Identities=22% Similarity=0.282 Sum_probs=240.8
Q ss_pred CcceEEEEEecC--CeEEEEECCCeEEEEEcCCCce---EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCC
Q psy10114 512 DDFYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQV---TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSV 586 (819)
Q Consensus 512 dDfyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~---~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~t 586 (819)
+.-.+.+++|++ +.+++|+ ||.|+|||+.+++. .......+|.+.|.+++|+|+|++|++|+.||.|++||+..
T Consensus 50 H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~ 128 (337)
T d1gxra_ 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA 128 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred CCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccc
Confidence 334466677774 4676665 89999999876532 23344567889999999999999999999999999999874
Q ss_pred --ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCe
Q psy10114 587 --AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNR 662 (819)
Q Consensus 587 --gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGt 662 (819)
++....+.+|...+.+++| ++..+++++.|+.|++||+++++ ......+|...|.+++|+++++.+++|+.|+.
T Consensus 129 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~ 206 (337)
T d1gxra_ 129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc
Confidence 4567778899999999999 46699999999999999998865 45677889999999999999999999999999
Q ss_pred EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEE
Q psy10114 663 LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 663 I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Las 742 (819)
|++||+++++.+..+. +...|.+++|+|+++.+++ |+ .|+.+++||+++++......+...|.+++|+|+++.+++
T Consensus 207 v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~-~~--~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s 282 (337)
T d1gxra_ 207 VRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV-GM--ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE-EE--TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ccccccccceeecccc-cccceEEEEEcccccccce-ec--cccccccccccccccccccccccccceEEECCCCCEEEE
Confidence 9999999999887765 7899999999999986655 43 799999999999998888888999999999999999998
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 743 THGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
|+.||.|++||..+++.+..+. |.+.|.+++|+|||++|++|+.||+|++||+
T Consensus 283 --~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 283 --TGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp --EETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred --EeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 7789999999999999987765 7889999999999999999999999999996
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.8e-35 Score=295.11 Aligned_cols=276 Identities=24% Similarity=0.409 Sum_probs=252.3
Q ss_pred ceEEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE
Q psy10114 514 FYLNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH 591 (819)
Q Consensus 514 fyv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~ 591 (819)
-.+.+++|+ ++.+++++.|+.|+|||..+++... .+.+|.+.|.+++|++++..+++++.++.+.+|+....+...
T Consensus 18 ~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (317)
T d1vyhc1 18 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 95 (317)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE--EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEE--EEeCCCCcEEEEeeeccccccccccccccccccccccccccc
Confidence 357778877 4579999999999999999988754 567899999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLH 669 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~ 669 (819)
.+.+|...+.++.+ +++.+++++.|+.+++||+++++ ....+.+|...+.+++|+++++++++|+.|+.|++|+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~ 173 (317)
T d1vyhc1 96 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173 (317)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ccccccccceeeeccCCCceEEeeccCcceeEeecccce--eeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeec
Confidence 99999999999999 57799999999999999999876 457788999999999999999999999999999999999
Q ss_pred CCceeEEEecCCCCEEEEEEcCCCC-------------------eEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeE
Q psy10114 670 SMSPLQTYTEHLAAVKAIAWSPHHH-------------------GLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVC 729 (819)
Q Consensus 670 t~~~i~t~~~h~~~VtsLafSPdg~-------------------~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~ 729 (819)
+++....+.+|...+.+++|+|++. .++++++ .|+.|++||.++++++..+. +...|.
T Consensus 174 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~v~ 251 (317)
T d1vyhc1 174 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVR 251 (317)
T ss_dssp TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred cceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEecc--CCCEEEEEECCCCcEEEEEeCCCCCEE
Confidence 9999999999999999999998753 2455554 89999999999999988874 678899
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
+++|+|+++.+++ |+.||.|++||+.+++.+.++.+|.+.|++++|+|++++|++|+.||+|++||
T Consensus 252 ~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 252 GVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEECSSSSCEEE--EETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCCEEEE--EECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 9999999999998 77999999999999999999999999999999999999999999999999997
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-33 Score=298.98 Aligned_cols=279 Identities=22% Similarity=0.388 Sum_probs=226.2
Q ss_pred ceEEEEEecCC-eEEEEECCCeEEEEEcCCCceEEEE----------------eccCCCCCeEEEEEcCCCCEEEEEecC
Q psy10114 514 FYLNLVDWSSQ-NVLSVGLGSCVYLWSACTSQVTRLC----------------DLSADGNSVTSVAWNERGNLVAVGTHH 576 (819)
Q Consensus 514 fyv~~ldwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~----------------~l~~h~~~VtsLafSpdG~~LAsGs~D 576 (819)
-.|++++|+++ .++++|.|+.|+|||+.+++..... ....|...|++++|+|+|++|++|+.|
T Consensus 63 ~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~d 142 (388)
T d1erja_ 63 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAED 142 (388)
T ss_dssp SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecccc
Confidence 35677888753 3444456999999999988764432 123466779999999999999999999
Q ss_pred ceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE
Q psy10114 577 GYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L 654 (819)
|.|++||...++.+....+|...|.++++ ++..+++|+.++.+++||.++... ......+...+....+.+++++|
T Consensus 143 g~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l 220 (388)
T d1erja_ 143 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLSIEDGVTTVAVSPGDGKYI 220 (388)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEECSTTCCEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccceeeeeeecccccc--ccccccccccccccccCCCCCeE
Confidence 99999999999999999999999999999 466899999999999999987552 34444444444444444588999
Q ss_pred EEEECCCeEEEEECCCCceeEEEe-------cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE-------
Q psy10114 655 ASGGNDNRLYVWNLHSMSPLQTYT-------EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ------- 720 (819)
Q Consensus 655 aSGS~DGtI~IWDl~t~~~i~t~~-------~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~------- 720 (819)
++|+.||.|++||.+++.....+. +|.+.|.+++|+|++..+++ |+ .|+.|++||+++++...
T Consensus 221 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s-~~--~d~~i~iwd~~~~~~~~~~~~~~~ 297 (388)
T d1erja_ 221 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS-GS--LDRSVKLWNLQNANNKSDSKTPNS 297 (388)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE-EE--TTSEEEEEEC--------------
T ss_pred EEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEE-EE--CCCcEEEEeccCCccccccccccc
Confidence 999999999999999988766653 57889999999999986655 43 79999999998765322
Q ss_pred ------EEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE------ecCCCEEEEEe
Q psy10114 721 ------CVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM------SPDGEAIVTGA 788 (819)
Q Consensus 721 ------~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf------SpDG~~LaSGS 788 (819)
...+...|.+++|+|+++++++ |+.||.|++||+.+++++.++.+|.+.|+++++ +|++++|+||+
T Consensus 298 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s--g~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s 375 (388)
T d1erja_ 298 GTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375 (388)
T ss_dssp -CEEEEEECCSSCEEEEEECGGGCEEEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred cceeeecccccceEEEEEECCCCCEEEE--EeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEe
Confidence 2245678999999999999998 889999999999999999999999999999975 56899999999
Q ss_pred CCCcEEEEECC
Q psy10114 789 GDETLRFWNVF 799 (819)
Q Consensus 789 ~DGtIrIWdl~ 799 (819)
.||+|++||++
T Consensus 376 ~Dg~I~iW~~~ 386 (388)
T d1erja_ 376 GDCKARIWKYK 386 (388)
T ss_dssp TTSEEEEEEEE
T ss_pred CCCEEEEEeee
Confidence 99999999984
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.4e-33 Score=299.10 Aligned_cols=271 Identities=18% Similarity=0.310 Sum_probs=228.9
Q ss_pred EEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE--EEEEecC
Q psy10114 519 VDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ--VHKLVGH 596 (819)
Q Consensus 519 ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~--i~tl~gH 596 (819)
.+.+++.++.+ .++.|.+||+.+.+...+ +.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++. ...+.+|
T Consensus 25 ~~~~g~~l~~~-~~~~v~i~~~~~~~~~~~--~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~ 101 (311)
T d1nr0a1 25 NTPAGDKIQYC-NGTSVYTVPVGSLTDTEI--YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF 101 (311)
T ss_dssp ECTTSSEEEEE-ETTEEEEEETTCSSCCEE--ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECS
T ss_pred EcCCCCEEEEE-eCCEEEEEECCCCceeEE--EcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccc
Confidence 34456666655 577899999998877654 568999999999999999999999999999999988754 4567899
Q ss_pred CCCeEEEEeC--CceeeeccC--CCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCE-EEEEECCCeEEEEECCCC
Q psy10114 597 TARVGALAWN--GDMLSSGSR--DRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY-LASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 597 s~~V~sLawn--g~~LaSGS~--DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~-LaSGS~DGtI~IWDl~t~ 671 (819)
.+.|.+++|+ ++.+++++. ++.+++|++++++ ....+.+|.+.|.+++|+|++++ +++|+.||.|++||++++
T Consensus 102 ~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~--~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~ 179 (311)
T d1nr0a1 102 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF 179 (311)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB
T ss_pred cCcccccccccccccccccccccccccccccccccc--ccccccccccccccccccccceeeeccccccccccccccccc
Confidence 9999999994 667887775 4669999998866 34678899999999999999885 889999999999999999
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--------CCCCeEEEEEccCCCEEEEE
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--------TGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--------~~s~V~sLafSpdg~~Last 743 (819)
+....+.+|...|.+++|+|+++.+++ ++ .|+.|++||..+++.+..+. |...|.+++|+|+++++++
T Consensus 180 ~~~~~~~~~~~~i~~v~~~p~~~~l~~-~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t- 255 (311)
T d1nr0a1 180 KFKSTFGEHTKFVHSVRYNPDGSLFAS-TG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS- 255 (311)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEE-EE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE-
T ss_pred ccccccccccccccccccCcccccccc-cc--ccccccccccccccccccccccccccccccccccccccCCCCCEEEE-
Confidence 999999999999999999999986655 43 79999999999998877663 4567999999999999998
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCC-CEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHSY-RVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~~-~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
|+.||.|++||+.+++.+.++..|.. ....+.+.++++.|++++.||.|++||.+
T Consensus 256 -gs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 256 -ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp -EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred -EeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence 77899999999999999999987653 22333444466689999999999999974
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.5e-32 Score=280.55 Aligned_cols=275 Identities=23% Similarity=0.426 Sum_probs=242.5
Q ss_pred ceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCc----
Q psy10114 514 FYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVA---- 587 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tg---- 587 (819)
-.+.+++|++ +.+++|+.||.|++||..+++... .+..|...|.+++|+|+++++++|+.|+.+.+|+....
T Consensus 56 ~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~ 133 (340)
T d1tbga_ 56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH--AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE--EEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCC
T ss_pred CCEEEEEECCCCCEEEEEECCCceeeeecccceeEE--EEecccccEEeeEeeccceeeeeecccceeeccccccccccc
Confidence 3477788874 579999999999999999987654 56678999999999999999999999999999997653
Q ss_pred eEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy10114 588 KQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVW 666 (819)
Q Consensus 588 k~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IW 666 (819)
+....+.+|......... .+..+..+..|+....++..... .......+...+....+.+++..+++|+.|+.|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~ 211 (340)
T d1tbga_ 134 RVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp CEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ccceeccccccccccccccccccccccccccccccccccccc--ccccccccceeEeeeccccccceeEEeecCceEEEE
Confidence 456777888888777776 56678888899999999887654 345566778889999999999999999999999999
Q ss_pred ECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc---CCCCeEEEEEccCCCEEEEE
Q psy10114 667 NLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---TGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 667 Dl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---~~s~V~sLafSpdg~~Last 743 (819)
|+++++++..+.+|.+.|.+++|+|++..+++ |+ .|+.|++||++..+....+. +...+.+++|+|+++.+++
T Consensus 212 d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s-~s--~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~- 287 (340)
T d1tbga_ 212 DVREGMCRQTFTGHESDINAICFFPNGNAFAT-GS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA- 287 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEE-
T ss_pred ECCCCcEEEEEeCCCCCeEEEEECCCCCEEEE-Ee--CCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEE-
Confidence 99999999999999999999999999986554 44 79999999999998877763 4567999999999999998
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
|+.||.|++||+.+++.+.++.+|.+.|++++|+|||++|+||+.||+|++||
T Consensus 288 -g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 288 -GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -EECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 88999999999999999999999999999999999999999999999999997
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.5e-32 Score=294.08 Aligned_cols=281 Identities=15% Similarity=0.195 Sum_probs=227.4
Q ss_pred EEEEEec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE--E
Q psy10114 516 LNLVDWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV--H 591 (819)
Q Consensus 516 v~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i--~ 591 (819)
+.+++|+ ++.+++++.|+.|++||..+++...+..+.+|.+.|++++|+|++++|++|+.||+|+|||+.+++.. .
T Consensus 10 It~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~ 89 (371)
T d1k8kc_ 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL 89 (371)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccccc
Confidence 4456666 45788899999999999999988888888999999999999999999999999999999999877644 4
Q ss_pred EEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccc--eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 592 KLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQS--ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 592 tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~--v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
.+.+|...|.+++| +++.+++|+.|+.|++|++....... ......|...|.+++|+|++++|++|+.|++|++||
T Consensus 90 ~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~ 169 (371)
T d1k8kc_ 90 VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169 (371)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEe
Confidence 45688999999999 57799999999999999988765322 233456889999999999999999999999999999
Q ss_pred CCCC------------------ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCe
Q psy10114 668 LHSM------------------SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQV 728 (819)
Q Consensus 668 l~t~------------------~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V 728 (819)
.... +.+.....|...|.+++|+|+++.++ +++ .|+.|++||+.+++.+..+. +..+|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-s~~--~d~~i~iwd~~~~~~~~~~~~~~~~v 246 (371)
T d1k8kc_ 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA-WVS--HDSTVCLADADKKMAVATLASETLPL 246 (371)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE-EEE--TTTEEEEEEGGGTTEEEEEECSSCCE
T ss_pred eccCccccccccccccccccceeeeeeccCccCcEEEEEeeccccccc-ccc--cCCcceEEeeecccceeeeecccccc
Confidence 8543 24556678899999999999998655 444 79999999999999888775 45689
Q ss_pred EEEEEccCCCEEEEEEecCCCeEEEEECCC--CcEEEE---------------------------------------Eec
Q psy10114 729 CNLAWSKHSSELVSTHGYSQNQILVWKYPT--LTQVAK---------------------------------------LTG 767 (819)
Q Consensus 729 ~sLafSpdg~~LastsGssDg~I~IWDl~s--~k~l~s---------------------------------------l~g 767 (819)
.+++|+++++.+++ |. |+.+.+|+... +..... ...
T Consensus 247 ~s~~fs~d~~~la~--g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (371)
T d1k8kc_ 247 LAVTFITESSLVAA--GH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL 323 (371)
T ss_dssp EEEEEEETTEEEEE--ET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSS
T ss_pred eeeeecCCCCEEEE--Ec-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceeccc
Confidence 99999999987775 54 66666654322 111000 013
Q ss_pred CCCCEEEEEEecCC----CEEEEEeCCCcEEEEECCCCc
Q psy10114 768 HSYRVLYLAMSPDG----EAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 768 H~~~VtsLafSpDG----~~LaSGS~DGtIrIWdl~s~~ 802 (819)
|.+.|+++++.+++ ..++|++.||.|++||+.+.+
T Consensus 324 H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~ 362 (371)
T d1k8kc_ 324 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362 (371)
T ss_dssp SSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcCh
Confidence 88889999998754 368999999999999996544
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-31 Score=281.27 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=223.6
Q ss_pred EEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce-----EEEEEecCCCCeEEEEe--CCceeeeccCCCeE
Q psy10114 547 RLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK-----QVHKLVGHTARVGALAW--NGDMLSSGSRDRMI 619 (819)
Q Consensus 547 ~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk-----~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI 619 (819)
.+..+ .|.+.|++++|+|+|++||+|+ ||.|+|||+.+++ ......+|.+.|.+++| ++++|++|+.||.|
T Consensus 44 ~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i 121 (337)
T d1gxra_ 44 QINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred EEEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccc
Confidence 34444 6899999999999999999997 7999999997653 22334579999999999 57899999999999
Q ss_pred EEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEE
Q psy10114 620 LQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLAS 699 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaS 699 (819)
++||+..........+..|...+.+++|+|++..+++++.|+.|++||++++++......|...|.+++|++++..+++.
T Consensus 122 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~ 201 (337)
T d1gxra_ 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999877666667788999999999999999999999999999999999999999999999999999999999866654
Q ss_pred EccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEec
Q psy10114 700 GGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSP 779 (819)
Q Consensus 700 GgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSp 779 (819)
+ .|+.+++||+++++.+....+...|.+++|+|+++.+++ |+.|+.+++||+.+++.. ....|...|++++|+|
T Consensus 202 ~---~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~ 275 (337)
T d1gxra_ 202 G---LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV--GMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAY 275 (337)
T ss_dssp E---TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEETTSSCEE-EECCCSSCEEEEEECT
T ss_pred c---ccccccccccccceeecccccccceEEEEEcccccccce--eccccccccccccccccc-cccccccccceEEECC
Confidence 3 799999999999999999999999999999999999998 788999999999988765 5568999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 780 DGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 780 DG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+|++|++|+.||.|++||+.+++....
T Consensus 276 ~g~~l~s~s~Dg~i~iwd~~~~~~~~~ 302 (337)
T d1gxra_ 276 CGKWFVSTGKDNLLNAWRTPYGASIFQ 302 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 999999999999999999998876544
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.1e-31 Score=284.32 Aligned_cols=247 Identities=15% Similarity=0.186 Sum_probs=222.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccc
Q psy10114 554 DGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQS 631 (819)
Q Consensus 554 h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~ 631 (819)
+.+.+..++++|+|+.||.++ ++.|.+||+++++..+.+.+|...|++++| +|++|++|+.||+|++||+...+...
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~ 94 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 94 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccc
Confidence 345667899999999999986 567999999999999999999999999999 67899999999999999999887655
Q ss_pred eEEEecccCCeEEEEECCCCCEEEEEECC--CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEE
Q psy10114 632 ERRLVGHRQEVCGLKWSPDNQYLASGGND--NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIR 709 (819)
Q Consensus 632 v~~l~gH~~~VtsLafSpdg~~LaSGS~D--GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIr 709 (819)
...+.+|.+.|.+++|+|+++++++++.+ ..+++||.++++....+.+|...|.+++|+|+++.++++|+ .|+.|+
T Consensus 95 ~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs--~d~~i~ 172 (311)
T d1nr0a1 95 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGS--DDNTVA 172 (311)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEE--TTSCEE
T ss_pred ccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccc--cccccc
Confidence 66788999999999999999999999864 56999999999999999999999999999999998888876 899999
Q ss_pred EEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-------cCCCCEEEEEEecCC
Q psy10114 710 FWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-------GHSYRVLYLAMSPDG 781 (819)
Q Consensus 710 IWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-------gH~~~VtsLafSpDG 781 (819)
+||+++++...... +...|.+++|+|+++.+++ ++.|+.|++||..+++.+..+. +|.+.|++++|+|+|
T Consensus 173 i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~--~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~ 250 (311)
T d1nr0a1 173 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS--TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 250 (311)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred cccccccccccccccccccccccccCcccccccc--ccccccccccccccccccccccccccccccccccccccccCCCC
Confidence 99999998888774 5778999999999999998 7789999999999998887764 588899999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCceec
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
++|++|+.||+|++||+.+++..+
T Consensus 251 ~~l~tgs~Dg~v~iwd~~t~~~~~ 274 (311)
T d1nr0a1 251 TKIASASADKTIKIWNVATLKVEK 274 (311)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEE
Confidence 999999999999999999887654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-30 Score=263.85 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=226.6
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRT 626 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t 626 (819)
..+.+|.+.|++++|+|++++||+|+.||+|+|||+++++.+.++.+|...|.+++| ++..+++++.++.+..|+...
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 90 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccc
Confidence 357899999999999999999999999999999999999999999999999999999 467999999999999999887
Q ss_pred CCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 627 PNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 627 ~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
.. ....+.+|...+.++.|+++++.+++++.|+.+++||+++++.+..+.+|...+.+++|++++..++ +++ .|+
T Consensus 91 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~--~d~ 165 (317)
T d1vyhc1 91 FE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--NDQ 165 (317)
T ss_dssp SC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEE--TTS
T ss_pred cc--cccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEE-EEe--CCC
Confidence 65 3466778999999999999999999999999999999999999999999999999999999998655 444 799
Q ss_pred eEEEEECCCCceeEEEc-CCCCeEEEEEccCC--------------------CEEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 707 CIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHS--------------------SELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg--------------------~~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
.|++||..+++....+. +...+.+++|++++ ..+++ |+.|+.|++||..+++.+.++
T Consensus 166 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~i~~~~~~~~~~~~~~ 243 (317)
T d1vyhc1 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS--GSRDKTIKMWDVSTGMCLMTL 243 (317)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE--EETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEe--ccCCCEEEEEECCCCcEEEEE
Confidence 99999999999888774 56678888888764 34555 778999999999999999999
Q ss_pred ecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 766 TGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 766 ~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.+|...|.+++|+|+|++|++|+.||.|++||+.+++....
T Consensus 244 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 284 (317)
T d1vyhc1 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 284 (317)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 99999999999999999999999999999999998775543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=2.9e-30 Score=265.78 Aligned_cols=271 Identities=17% Similarity=0.251 Sum_probs=214.2
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
+.+++++++.+++|+.|+.|++||..+++.. ..+.+|.+.|++++|+++ ..|++|+.||.|++|+....+.......
T Consensus 16 itc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~--~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 92 (355)
T d1nexb2 16 ITCLQFEDNYVITGADDKMIRVYDSINKKFL--LQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEG 92 (355)
T ss_dssp EEEEEEETTEEEEEETTTEEEEEETTTTEEE--EEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEEEECCCEEEEEeCCCeEEEEECCCCcEE--EEEECCCCCEEEEEEcCC-CEEEEEeccccccccccccccccccccc
Confidence 5678999999999999999999999998764 467889999999999985 5899999999999999998877766654
Q ss_pred CCCCeE--EEEe--CCceeeeccCCCeEEEEECCCCCc------------------------------------------
Q psy10114 596 HTARVG--ALAW--NGDMLSSGSRDRMILQRDVRTPNS------------------------------------------ 629 (819)
Q Consensus 596 Hs~~V~--sLaw--ng~~LaSGS~DGtI~IWDi~t~~~------------------------------------------ 629 (819)
+..... ...+ ++..+++++.|+.|++||+++...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (355)
T d1nexb2 93 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN 172 (355)
T ss_dssp CSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETT
T ss_pred ccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccc
Confidence 433332 2222 345677777777777777654210
Q ss_pred -------------------cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEc
Q psy10114 630 -------------------QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWS 690 (819)
Q Consensus 630 -------------------~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafS 690 (819)
.......++...+.++.++++++.+++++.|+.|++||.+++..+..+.+|...|.+++++
T Consensus 173 ~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~ 252 (355)
T d1nexb2 173 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS 252 (355)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC
T ss_pred eeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc
Confidence 1122344566778889999999999999999999999999999999999999999999997
Q ss_pred CCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE-EEecCC
Q psy10114 691 PHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA-KLTGHS 769 (819)
Q Consensus 691 Pdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~-sl~gH~ 769 (819)
++ .+++|+ .||.|++||++++.......+........++++++.+++ | .|+.|++||+++++.+. .+.+|.
T Consensus 253 ~~---~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g-~d~~i~vwd~~tg~~~~~~~~~~~ 324 (355)
T d1nexb2 253 DK---FLVSAA--ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVS--G-SENQFNIYNLRSGKLVHANILKDA 324 (355)
T ss_dssp SS---EEEEEC--TTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEE--E-ETTEEEEEETTTCCBCCSCTTTTC
T ss_pred cc---eeeeee--cccccccccccccceecccccCCceEEEEEcCCCCEEEE--E-eCCEEEEEECCCCCEEEEEecCCC
Confidence 53 556665 899999999999887666655544444566777776665 4 58999999999999875 467899
Q ss_pred CCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 770 YRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 770 ~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
+.|.+++|+++ ..+++++.||++++|.+
T Consensus 325 ~~V~~v~~~~~-~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 325 DQIWSVNFKGK-TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp SEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred CCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence 99999999987 47888999999776643
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=5.2e-29 Score=254.99 Aligned_cols=280 Identities=23% Similarity=0.386 Sum_probs=222.0
Q ss_pred CceeecCCCcCCcceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEE
Q psy10114 501 PFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQ 580 (819)
Q Consensus 501 P~kvLdap~l~dDfyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~ 580 (819)
+.++|..+. +.-+.+++++++.+++|+.|+.|+|||+.+++... .+.+|.+.|.+++|+++ +|++|+.||.++
T Consensus 8 ~~~~l~GH~---~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~--~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~ 80 (342)
T d2ovrb2 8 SPKVLKGHD---DHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLR--TLVGHTGGVWSSQMRDN--IIISGSTDRTLK 80 (342)
T ss_dssp CCEEEECST---TSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE--ECCCCSSCEEEEEEETT--EEEEEETTSCEE
T ss_pred cCEEECCcC---CceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEE--EEeCCCCCEEEEEeCCC--ccccceeccccc
Confidence 445666543 22346789999999999999999999999998754 67899999999999864 999999999999
Q ss_pred EeecCCceEEEEEecCCCCeEEEEe----------------------------------------CCceeeeccCCCeEE
Q psy10114 581 VWDVSVAKQVHKLVGHTARVGALAW----------------------------------------NGDMLSSGSRDRMIL 620 (819)
Q Consensus 581 IWDl~tgk~i~tl~gHs~~V~sLaw----------------------------------------ng~~LaSGS~DGtI~ 620 (819)
+|+............+...+..... ....+++++.|+.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 160 (342)
T d2ovrb2 81 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 160 (342)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred ccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEE
Confidence 9998776655444333333322222 344667777788888
Q ss_pred EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEE
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSG 700 (819)
+||.+... ....+.+|...+....+ ++..+++|+.||.|++||++.++++..+.+|...+.+++++++ ++++|
T Consensus 161 ~~d~~~~~--~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~l~s~ 233 (342)
T d2ovrb2 161 VWDPETET--CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSG 233 (342)
T ss_dssp EEEGGGTE--EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETT---EEEEE
T ss_pred Eeecccce--eeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCC---EEEEE
Confidence 88876644 34667777777666555 6889999999999999999999999999999999999988764 55665
Q ss_pred ccCCCCeEEEEECCCCceeEEEcC----CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-----cCCCC
Q psy10114 701 GGTADRCIRFWNTLTGQPMQCVDT----GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT-----GHSYR 771 (819)
Q Consensus 701 gGs~DgtIrIWDl~tg~~v~~l~~----~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~-----gH~~~ 771 (819)
+ .|+.|++||..+.+....+.. ...+.++.+ +++.+++ |+.||.|++||+++++.+.++. +|.+.
T Consensus 234 s--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s--~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~ 307 (342)
T d2ovrb2 234 N--ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVIT--SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307 (342)
T ss_dssp E--TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEE--EETTSEEEEEETTTCCEEEEEEECTTGGGTCE
T ss_pred c--CCCEEEEEecccccccccccccceeeeceeeccc--CCCeeEE--EcCCCEEEEEECCCCCEEEEEecccCCCCCCC
Confidence 5 899999999999888777742 344555555 5667877 7789999999999999998875 57788
Q ss_pred EEEEEEecCCCEEEEEeCCCc----EEEEECCC
Q psy10114 772 VLYLAMSPDGEAIVTGAGDET----LRFWNVFS 800 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~DGt----IrIWdl~s 800 (819)
|++++|+|++.++++|+.||+ |++||++.
T Consensus 308 v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 308 VWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 999999999999999999986 99999864
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1e-29 Score=269.75 Aligned_cols=272 Identities=24% Similarity=0.399 Sum_probs=221.6
Q ss_pred EEEECCCeEEEEEcCCCceEE--EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe----------
Q psy10114 527 LSVGLGSCVYLWSACTSQVTR--LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV---------- 594 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~~~~--l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~---------- 594 (819)
+....++...+|+....+... +....+|.+.|+|++|+|||++||+|+ ||.|+|||+.+++.+..+.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~ 110 (388)
T d1erja_ 32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPE 110 (388)
T ss_dssp SEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC---------
T ss_pred cccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccccccc
Confidence 345666778889876544322 223336999999999999999999987 8999999999998877664
Q ss_pred --------cCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEE
Q psy10114 595 --------GHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLY 664 (819)
Q Consensus 595 --------gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~ 664 (819)
+|...|.+++| ++++|++|+.||.|++||...++ ......+|...|.++++++++..+++|+.++.++
T Consensus 111 ~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~ 188 (388)
T d1erja_ 111 NLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVR 188 (388)
T ss_dssp --------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccccccccCCCCCEEEEEECCCCCcceecccccccccccccccc--cccccccccccccccccccccccccccccceeee
Confidence 35667999999 57799999999999999998765 4577788999999999999999999999999999
Q ss_pred EEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--------CCCCeEEEEEccC
Q psy10114 665 VWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--------TGSQVCNLAWSKH 736 (819)
Q Consensus 665 IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--------~~s~V~sLafSpd 736 (819)
+||.++.........+.. ..++.+++....++++|+ .|+.|++||..++.....+. +...|.+++|+|+
T Consensus 189 ~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 265 (388)
T d1erja_ 189 IWDLRTGQCSLTLSIEDG-VTTVAVSPGDGKYIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 265 (388)
T ss_dssp EEETTTTEEEEEEECSSC-EEEEEECSTTCCEEEEEE--TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred eeeccccccccccccccc-cccccccCCCCCeEEEEc--CCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCC
Confidence 999999888777765544 455666664444666665 89999999999998877653 4567999999999
Q ss_pred CCEEEEEEecCCCeEEEEECCCCcE------------EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee
Q psy10114 737 SSELVSTHGYSQNQILVWKYPTLTQ------------VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 737 g~~LastsGssDg~I~IWDl~s~k~------------l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~ 804 (819)
++.+++ |+.|+.|++||+.++.. ......|...|.+++|+|+|++|++|+.||.|++||+.+++..
T Consensus 266 ~~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~ 343 (388)
T d1erja_ 266 GQSVVS--GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 343 (388)
T ss_dssp SSEEEE--EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEE--EECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 999998 78999999999875433 3455678999999999999999999999999999999988765
Q ss_pred cc
Q psy10114 805 QR 806 (819)
Q Consensus 805 ~k 806 (819)
..
T Consensus 344 ~~ 345 (388)
T d1erja_ 344 LM 345 (388)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=2.4e-30 Score=278.45 Aligned_cols=240 Identities=16% Similarity=0.266 Sum_probs=205.1
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCcc
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
.++|+|++|+|+|++||+|+.||.|+|||.++++ .+..+++|.+.|.+++| ++++|++|+.|++|++||+++....
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~ 86 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 86 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc
Confidence 4789999999999999999999999999998775 67788999999999999 5789999999999999999887655
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCcee----EEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPL----QTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i----~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
....+.+|...|.+++|+|+++.+++|+.|++|++|+....... .....|...|.+++|+|+++.+ ++|+ .|+
T Consensus 87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s--~D~ 163 (371)
T d1k8kc_ 87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL-AAGS--CDF 163 (371)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE-EEEE--TTS
T ss_pred cccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccce-eccc--cCc
Confidence 56667789999999999999999999999999999998766543 3344688999999999999865 4554 899
Q ss_pred eEEEEECCCCc------------------eeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec
Q psy10114 707 CIRFWNTLTGQ------------------PMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767 (819)
Q Consensus 707 tIrIWDl~tg~------------------~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g 767 (819)
+|++||...+. ..... .+...|.+++|+|+++.+++ ++.|+.|++||+.+++.+..+.+
T Consensus 164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s--~~~d~~i~iwd~~~~~~~~~~~~ 241 (371)
T d1k8kc_ 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW--VSHDSTVCLADADKKMAVATLAS 241 (371)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE--EETTTEEEEEEGGGTTEEEEEEC
T ss_pred EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccc--cccCCcceEEeeecccceeeeec
Confidence 99999986532 22222 35567999999999999988 77899999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 768 HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 768 H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
|..+|.+++|++||++|++| .|+.+++|+...
T Consensus 242 ~~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 242 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 273 (371)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred ccccceeeeecCCCCEEEEE-cCCceEEEEeeC
Confidence 99999999999999877765 578777766544
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.9e-29 Score=247.24 Aligned_cols=266 Identities=26% Similarity=0.456 Sum_probs=225.1
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~ 594 (819)
.+.+++|+++.+++|+.||.|+|||..+++... .+.+|.+.|++++| ++++|++|+.||.|++|++..+.......
T Consensus 17 ~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~--~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~ 92 (293)
T d1p22a2 17 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR--ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI 92 (293)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSSCCEEE--EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC
T ss_pred CEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEE--EEecCCCCEeeeec--ccceeeccccccccccccccccccccccc
Confidence 466789999999999999999999999988765 57789999999987 57899999999999999999999888888
Q ss_pred cCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCcc-ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce
Q psy10114 595 GHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQ-SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP 673 (819)
Q Consensus 595 gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~-~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~ 673 (819)
.+.....+.......++++..++.+.+||....... ....+..|...+..+.+. ...+++++.|+.|++||.++++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~ 170 (293)
T d1p22a2 93 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEF 170 (293)
T ss_dssp CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCE
T ss_pred ccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcE
Confidence 777777777778889999999999999999876532 334557788888888776 45788999999999999999999
Q ss_pred eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC-CeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS-QVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 674 i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s-~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
+..+.++...+..+.+++ . .+++++ .|+.|++||+++++.+....... .+. .+++++..+++ |+.||.|+
T Consensus 171 ~~~~~~~~~~v~~~~~~~--~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~l~s--g~~dg~i~ 241 (293)
T d1p22a2 171 VRTLNGHKRGIACLQYRD--R-LVVSGS--SDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKRIVS--GAYDGKIK 241 (293)
T ss_dssp EEEEECCSSCEEEEEEET--T-EEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEE--EEECCSSEEEE--EETTSCEE
T ss_pred EEEEcccccccccccCCC--C-eEEEec--CCCEEEEEecccceeeeeecccceeee--eccccceEEEE--EcCCCEEE
Confidence 999999999999888865 3 345554 79999999999999888775433 344 45678888888 78999999
Q ss_pred EEECCC---------CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEE
Q psy10114 753 VWKYPT---------LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 797 (819)
Q Consensus 753 IWDl~s---------~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWd 797 (819)
+||+.+ ...+..+.+|.+.|++++| ++++|+||+.||+|++||
T Consensus 242 iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EEECCCCccccccCCceeeEEecCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 999642 4567889999999999998 567899999999999997
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=8.6e-29 Score=254.67 Aligned_cols=272 Identities=17% Similarity=0.228 Sum_probs=209.3
Q ss_pred ceEEEEEecC--CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE--
Q psy10114 514 FYLNLVDWSS--QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ-- 589 (819)
Q Consensus 514 fyv~~ldwS~--~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~-- 589 (819)
-.+.+++|++ +.+++++.|+.|++||+.+++..+.. ...|.+.|++++|+|+|+++ +++.|+.+++|+......
T Consensus 13 ~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~-~~~h~~~v~~v~~~~~g~~~-~~~~d~~v~~~~~~~~~~~~ 90 (299)
T d1nr0a2 13 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF-PDVHATMITGIKTTSKGDLF-TVSWDDHLKVVPAGGSGVDS 90 (299)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS-SCSCSSCEEEEEECTTSCEE-EEETTTEEEEECSSSSSSCT
T ss_pred CCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-cCCCCCcEEEEEeeccceee-cccceeeEEEeccCCccccc
Confidence 3577778774 58999999999999999998866532 24688999999999999754 566789999999865421
Q ss_pred -EEEEecCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy10114 590 -VHKLVGHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWN 667 (819)
Q Consensus 590 -i~tl~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWD 667 (819)
......+...+.+++|+ ...+++++.++.+.+|+.... .. ......+.+++|+|+++++++|+.||.|++||
T Consensus 91 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~----~~--~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d 164 (299)
T d1nr0a2 91 SKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL----TE--VPISYNSSCVALSNDKQFVAVGGQDSKVHVYK 164 (299)
T ss_dssp TSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE----EE--EECSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccc----cc--cccccccccccccccccccccccccccccccc
Confidence 22334577888999994 223445556678999985431 11 22345688999999999999999999999999
Q ss_pred CCCCceeE-EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE----cCCCCeEEEEEccCCCEEEE
Q psy10114 668 LHSMSPLQ-TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV----DTGSQVCNLAWSKHSSELVS 742 (819)
Q Consensus 668 l~t~~~i~-t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l----~~~s~V~sLafSpdg~~Las 742 (819)
+++++... ....|...|.+++|+|+++.+++.+ .|+.|++||+.++...... .+...|.+++|+|+++.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s 241 (299)
T d1nr0a2 165 LSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD---QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241 (299)
T ss_dssp EETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE---TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEE
T ss_pred cccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccceEE
Confidence 98877543 3456899999999999998665543 7999999999887665433 24678999999999999998
Q ss_pred EEecCCCeEEEEECCCCcEEEE--EecC-CCCEEEEEEecCCCEEEEEeCCCcEEEEECC
Q psy10114 743 THGYSQNQILVWKYPTLTQVAK--LTGH-SYRVLYLAMSPDGEAIVTGAGDETLRFWNVF 799 (819)
Q Consensus 743 tsGssDg~I~IWDl~s~k~l~s--l~gH-~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~ 799 (819)
|+.|+.|++||+.+++.... ...| ...+.+++ ++++++|++|+.||+|++||+.
T Consensus 242 --gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 242 --GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI-WLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp --EETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEE-EEETTEEEEEETTSCEEEEECC
T ss_pred --EcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEE-ECCCCEEEEEeCCCEEEEEecc
Confidence 78999999999987654332 2334 34566665 4667899999999999999984
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.1e-28 Score=257.88 Aligned_cols=274 Identities=17% Similarity=0.247 Sum_probs=210.6
Q ss_pred EEec--CCeEEEEECCC-eEEEEEcCCCceEEEEeccCC-CCCeEEEEEcC--CCCEEEEEecCceEEEeecCCce----
Q psy10114 519 VDWS--SQNVLSVGLGS-CVYLWSACTSQVTRLCDLSAD-GNSVTSVAWNE--RGNLVAVGTHHGYVQVWDVSVAK---- 588 (819)
Q Consensus 519 ldwS--~~~LLa~g~Dg-~V~LWd~~tg~~~~l~~l~~h-~~~VtsLafSp--dG~~LAsGs~DGtI~IWDl~tgk---- 588 (819)
++|+ ++.++.++.++ .|+.|+....+......+.+| ...|++++|+| +|.+||+|+.||+|+|||+..++
T Consensus 23 l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~ 102 (325)
T d1pgua1 23 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS 102 (325)
T ss_dssp CEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred EEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceee
Confidence 4444 45666655443 256676655554445566676 46899999997 56899999999999999986543
Q ss_pred ----EEEEEecCCCCeEEEEe--CCceeeecc--CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCE-EEEEEC
Q psy10114 589 ----QVHKLVGHTARVGALAW--NGDMLSSGS--RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQY-LASGGN 659 (819)
Q Consensus 589 ----~i~tl~gHs~~V~sLaw--ng~~LaSGS--~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~-LaSGS~ 659 (819)
....+..|.++|.+++| ++..+++++ .++.+.+|+.++++ ....+.+|...|.+++|+|+++. +++++.
T Consensus 103 ~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 180 (325)
T d1pgua1 103 VEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--SLGEVSGHSQRINACHLKQSRPMRSMTVGD 180 (325)
T ss_dssp EEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC--EEEECCSCSSCEEEEEECSSSSCEEEEEET
T ss_pred eecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc--cceeeeecccccccccccccccceEEEeec
Confidence 22345678999999999 456666554 57789999998765 45778899999999999998875 778999
Q ss_pred CCeEEEEECCCCceeEEEe---cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEc-
Q psy10114 660 DNRLYVWNLHSMSPLQTYT---EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWS- 734 (819)
Q Consensus 660 DGtI~IWDl~t~~~i~t~~---~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafS- 734 (819)
|+.+++||....+...... .|...|.+++|+|++..++++++ .|+.|++||+++++.+..+. +...+.++.|+
T Consensus 181 d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~--~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~ 258 (325)
T d1pgua1 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG--SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 258 (325)
T ss_dssp TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE--TTCCEEEEETTTCCEEEECCBTTBCCCSCEEEE
T ss_pred ccccccccccccccceecccccCCCCccEEeeeccccceeccccc--cccceeeeeeccccccccccccccccccceeee
Confidence 9999999998877666554 56778999999998766777766 89999999999999988875 34444444444
Q ss_pred --cCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC--EEEEEEecC-CCEEEEEeCCCcEEEEEC
Q psy10114 735 --KHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR--VLYLAMSPD-GEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 735 --pdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~--VtsLafSpD-G~~LaSGS~DGtIrIWdl 798 (819)
++|+.+++ ++.|+.|++||+++++.+..+..|... +..+++.+. +.+|++|+.||+|++||+
T Consensus 259 ~~~dg~~l~s--~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 259 SWLDSQKFAT--VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp EESSSSEEEE--EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred eccCCCEEEE--EeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 68899988 779999999999999999988876544 334444332 347899999999999996
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=8.7e-28 Score=247.07 Aligned_cols=244 Identities=15% Similarity=0.185 Sum_probs=201.8
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEeCC-ceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAWNG-DMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLawng-~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|+|++|++|+.||+|++||+++++.++.+. +|...|.+++|++ ..+++++.|+.+++|+....
T Consensus 7 ~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~ 86 (299)
T d1nr0a2 7 VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGS 86 (299)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSS
T ss_pred EcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCc
Confidence 578999999999999999999999999999999999999988875 7999999999953 35777888999999998764
Q ss_pred Ccc-ceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 628 NSQ-SERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 628 ~~~-~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
... .......+...+.+++|+++++.+++++ ++.+.+|+... ..... ....+.+++|+|+++.++ +|+ .|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~--~~~~~--~~~~~~~~~~s~~~~~l~-~g~--~dg 158 (299)
T d1nr0a2 87 GVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK--LTEVP--ISYNSSCVALSNDKQFVA-VGG--QDS 158 (299)
T ss_dssp SSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE--EEEEE--CSSCEEEEEECTTSCEEE-EEE--TTS
T ss_pred cccccccccccccccccccccccccccccccc-ccccccccccc--ccccc--cccccccccccccccccc-ccc--ccc
Confidence 422 2234456788899999999999777665 56899999542 22222 345678999999998555 444 899
Q ss_pred eEEEEECCCCcee--EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE---EEecCCCCEEEEEEecCC
Q psy10114 707 CIRFWNTLTGQPM--QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA---KLTGHSYRVLYLAMSPDG 781 (819)
Q Consensus 707 tIrIWDl~tg~~v--~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~---sl~gH~~~VtsLafSpDG 781 (819)
.|++||+++++.. ....+...|.+++|+|+++.+++ ++.|+.|++||..++.... .+.+|...|++++|+|+|
T Consensus 159 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 236 (299)
T d1nr0a2 159 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVA--TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN 236 (299)
T ss_dssp EEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS
T ss_pred cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccc
Confidence 9999999887654 34567889999999999999998 7789999999998776653 456789999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCce
Q psy10114 782 EAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 782 ~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
++|++|+.||.|++||+.++..
T Consensus 237 ~~l~sgs~dg~i~iwd~~~~~~ 258 (299)
T d1nr0a2 237 VRLATGSLDNSVIVWNMNKPSD 258 (299)
T ss_dssp SEEEEEETTSCEEEEETTCTTS
T ss_pred cceEEEcCCCEEEEEECCCCCc
Confidence 9999999999999999987654
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.3e-26 Score=238.48 Aligned_cols=251 Identities=16% Similarity=0.353 Sum_probs=218.4
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCC
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~ 627 (819)
.+.+|.+.|++++|+|++++||+|+.||+|+|||+.+++.+..+.+|...|.+++| +++++++|+.|+.+.+|+....
T Consensus 50 tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~ 129 (340)
T d1tbga_ 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccccc
Confidence 57899999999999999999999999999999999999999999999999999999 5779999999999999998765
Q ss_pred Cc--cceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC
Q psy10114 628 NS--QSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD 705 (819)
Q Consensus 628 ~~--~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D 705 (819)
.. .....+.+|.......... .+..++.+..|.....++............+...+....+.+.+..+++ |+ .|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~d 205 (340)
T d1tbga_ 130 EGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS-GA--CD 205 (340)
T ss_dssp CSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEE-EE--TT
T ss_pred ccccccceecccccccccccccc-cccccccccccccccccccccccccccccccceeEeeeccccccceeEE-ee--cC
Confidence 43 2334566777666655544 4567888899999999999888888888888999999999998885554 43 79
Q ss_pred CeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe--cCCCCEEEEEEecCCC
Q psy10114 706 RCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT--GHSYRVLYLAMSPDGE 782 (819)
Q Consensus 706 gtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~--gH~~~VtsLafSpDG~ 782 (819)
+.|++||+++++.+..+. +...|.+++|+|+++.+++ |+.|+.|++||+........+. .+...|.+++|+|+|+
T Consensus 206 ~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s--~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 283 (340)
T d1tbga_ 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT--GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp TEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSC
T ss_pred ceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEE--EeCCCeEEEEeecccccccccccccccCceEEEEECCCCC
Confidence 999999999999988875 5788999999999999998 7789999999999988887664 5667799999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceecc
Q psy10114 783 AIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 783 ~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+|++|+.||.|++||+.+++....
T Consensus 284 ~l~~g~~dg~i~iwd~~~~~~~~~ 307 (340)
T d1tbga_ 284 LLLAGYDDFNCNVWDALKADRAGV 307 (340)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEECCCEEEEEECCCCcEEEE
Confidence 999999999999999998876544
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.5e-26 Score=237.85 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=199.5
Q ss_pred EEeccCCCCCe-EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECC
Q psy10114 548 LCDLSADGNSV-TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVR 625 (819)
Q Consensus 548 l~~l~~h~~~V-tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~ 625 (819)
..++.+|.+.| +|+++ +|++||+|+.||+|+|||+.+++.+.++.+|.+.|.+++| +++.|++|+.||.|++|+..
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~ 82 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIK 82 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETT
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCCEEEEEeccccccccccc
Confidence 34678998875 66665 5889999999999999999999999999999999999999 56799999999999999998
Q ss_pred CCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEE-----------------------EecCCC
Q psy10114 626 TPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQT-----------------------YTEHLA 682 (819)
Q Consensus 626 t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t-----------------------~~~h~~ 682 (819)
............+........++++++.+++++.|+.|++||+++...... ...|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (355)
T d1nexb2 83 KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 162 (355)
T ss_dssp TTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSS
T ss_pred ccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccc
Confidence 866443333334444556677889999999999999999999977553322 122334
Q ss_pred CEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE
Q psy10114 683 AVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ 761 (819)
Q Consensus 683 ~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~ 761 (819)
.+.. +.+++..+ +++. .|+.|++||+++++.+.... ....+.++.++++++.+++ ++.|+.|++||..++..
T Consensus 163 ~v~~--~~~~~~~~-~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~i~i~d~~~~~~ 235 (355)
T d1nexb2 163 SVRT--VSGHGNIV-VSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS--ASMDTTIRIWDLENGEL 235 (355)
T ss_dssp CEEE--EEEETTEE-EEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEE--EETTSCEEEEETTTCCE
T ss_pred cccc--ccccccee-eeec--ccceeeeeecccccceeeeeccccccccccccccceeeec--ccccceEEeeecccccc
Confidence 4443 34455544 4443 79999999999999887775 5677899999999999998 77899999999999999
Q ss_pred EEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 762 VAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 762 l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
+..+.+|...|.+++++ +++|++|+.||.|++||+.+..+..
T Consensus 236 ~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~ 277 (355)
T d1nexb2 236 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF 277 (355)
T ss_dssp EEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccccccccccccc--cceeeeeecccccccccccccceec
Confidence 99999999999999986 5699999999999999998876543
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.7e-26 Score=244.35 Aligned_cols=247 Identities=17% Similarity=0.185 Sum_probs=205.5
Q ss_pred CCeEEEEEcCCCCEEEEEecCc-eEEEeecCCc--eEEEEEecCC-CCeEEEEeC----CceeeeccCCCeEEEEECCCC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHG-YVQVWDVSVA--KQVHKLVGHT-ARVGALAWN----GDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DG-tI~IWDl~tg--k~i~tl~gHs-~~V~sLawn----g~~LaSGS~DGtI~IWDi~t~ 627 (819)
..+++++|+|+|+.|+.++.++ .|+.||.... ..+..+.+|. ..|++++|+ +.+|++|+.||+|++||+..+
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~ 97 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 97 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCC
Confidence 4678999999999999987664 3566775443 4577788874 679999993 568999999999999999765
Q ss_pred Cccce------EEEecccCCeEEEEECCCCCEEEEEEC--CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEE
Q psy10114 628 NSQSE------RRLVGHRQEVCGLKWSPDNQYLASGGN--DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLAS 699 (819)
Q Consensus 628 ~~~~v------~~l~gH~~~VtsLafSpdg~~LaSGS~--DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaS 699 (819)
..... .....|.+.|.+++|+++++.+++++. ++.+.+|+.++++.+..+.+|...|.+++|+|++..++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 177 (325)
T d1pgua1 98 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMT 177 (325)
T ss_dssp GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEE
T ss_pred cceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEE
Confidence 43221 234568889999999999999988765 6689999999999999999999999999999999988877
Q ss_pred EccCCCCeEEEEECCCCceeEEEc----CCCCeEEEEEccCC-CEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEE
Q psy10114 700 GGGTADRCIRFWNTLTGQPMQCVD----TGSQVCNLAWSKHS-SELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLY 774 (819)
Q Consensus 700 GgGs~DgtIrIWDl~tg~~v~~l~----~~s~V~sLafSpdg-~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~Vts 774 (819)
++ .|+.+++||..+++...... +...|.+++|+|++ ..+++ ++.|+.|++||.++++.+.++.+|...+.+
T Consensus 178 ~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s--~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~ 253 (325)
T d1pgua1 178 VG--DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT--VGSDRKISCFDGKSGEFLKYIEDDQEPVQG 253 (325)
T ss_dssp EE--TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE--EETTCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred ee--cccccccccccccccceecccccCCCCccEEeeeccccceeccc--cccccceeeeeecccccccccccccccccc
Confidence 76 89999999999887766653 35669999999975 56666 778999999999999999999999888776
Q ss_pred EEEe---cCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 775 LAMS---PDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 775 LafS---pDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+.|+ +||++|++++.|+.|++||+.+++....
T Consensus 254 ~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~ 288 (325)
T d1pgua1 254 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQK 288 (325)
T ss_dssp CEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 6666 7899999999999999999998876543
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.6e-26 Score=250.24 Aligned_cols=266 Identities=16% Similarity=0.229 Sum_probs=195.1
Q ss_pred eEEEEEecCCeEEEEECCCeEEEEEcCCCceE----EEEeccCCCCCeEEEEE------cC-CCCEEEEEecCceEEEee
Q psy10114 515 YLNLVDWSSQNVLSVGLGSCVYLWSACTSQVT----RLCDLSADGNSVTSVAW------NE-RGNLVAVGTHHGYVQVWD 583 (819)
Q Consensus 515 yv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~----~l~~l~~h~~~VtsLaf------Sp-dG~~LAsGs~DGtI~IWD 583 (819)
.+.+++++++.+++++.|+.|++||..+.+.. .......|...+..+.. +. ++..+++++.||.|++|+
T Consensus 16 ~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~ 95 (393)
T d1sq9a_ 16 DIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYR 95 (393)
T ss_dssp CEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEE
T ss_pred ccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEE
Confidence 46667788999999999999999998665321 11122233433333222 11 235788999999999999
Q ss_pred cCCceE---E--EEEe-----cCCCCeEEEEeC-------CceeeeccCCCeEEEEECCCCCcc---------c------
Q psy10114 584 VSVAKQ---V--HKLV-----GHTARVGALAWN-------GDMLSSGSRDRMILQRDVRTPNSQ---------S------ 631 (819)
Q Consensus 584 l~tgk~---i--~tl~-----gHs~~V~sLawn-------g~~LaSGS~DGtI~IWDi~t~~~~---------~------ 631 (819)
+..... . .... .+...+..++|. ++++++++.||.+.+||+...... .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~ 175 (393)
T d1sq9a_ 96 ITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175 (393)
T ss_dssp EEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE
T ss_pred ccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceeccc
Confidence 754321 1 1111 245567777772 458899999999999998543210 0
Q ss_pred -eEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEE------ecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 632 -ERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTY------TEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 632 -v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~------~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
......+...+.+++|+|++ +||+|+.||+|++||+++++++..+ .+|..+|.+++|+|+|+.+++.+ .
T Consensus 176 ~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs---~ 251 (393)
T d1sq9a_ 176 TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH---D 251 (393)
T ss_dssp EECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE---E
T ss_pred ceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeec---C
Confidence 01112344568899999987 8999999999999999999877655 46889999999999999665543 4
Q ss_pred CC---eEEEEECCCCceeEEEc--------------CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec
Q psy10114 705 DR---CIRFWNTLTGQPMQCVD--------------TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767 (819)
Q Consensus 705 Dg---tIrIWDl~tg~~v~~l~--------------~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g 767 (819)
|+ .|++||+++++.+..+. |...|++++|+|+++.|++ |+.|+.|++||+.+++.+.++++
T Consensus 252 D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S--~s~D~~v~vWd~~~g~~~~~l~g 329 (393)
T d1sq9a_ 252 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS--AGWDGKLRFWDVKTKERITTLNM 329 (393)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE--EETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEE--ECCCCEEEEEECCCCCEEEEECC
Confidence 54 69999999999887763 5678999999999999998 88999999999999999999999
Q ss_pred CCCCEE----EEEEecCCCEEEE
Q psy10114 768 HSYRVL----YLAMSPDGEAIVT 786 (819)
Q Consensus 768 H~~~Vt----sLafSpDG~~LaS 786 (819)
|.+.|. .++|+++|..+++
T Consensus 330 H~~~v~~~~~~~~~~~~~~~~~~ 352 (393)
T d1sq9a_ 330 HCDDIEIEEDILAVDEHGDSLAE 352 (393)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSS
T ss_pred cCCcccCCccEEEECCCCCEEEE
Confidence 976654 3566666665543
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=7.5e-26 Score=231.25 Aligned_cols=244 Identities=23% Similarity=0.372 Sum_probs=192.3
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCC
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPN 628 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~ 628 (819)
..+++|.+.|.+ +++++|++||+|+.||+|+|||+.++++++++.+|.+.|.+++|+++.|++|+.|+.+++|+.....
T Consensus 10 ~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~~~~~~~~~~ 88 (342)
T d2ovrb2 10 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE 88 (342)
T ss_dssp EEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred EEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCCccccceeccccccccccccc
Confidence 356799999865 3566799999999999999999999999999999999999999999999999999999999987643
Q ss_pred ccceEEEecccCC--------------------------------------eEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy10114 629 SQSERRLVGHRQE--------------------------------------VCGLKWSPDNQYLASGGNDNRLYVWNLHS 670 (819)
Q Consensus 629 ~~~v~~l~gH~~~--------------------------------------VtsLafSpdg~~LaSGS~DGtI~IWDl~t 670 (819)
.. .....+... ............+++++.|+.|++||.+.
T Consensus 89 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 166 (342)
T d2ovrb2 89 CI--HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPET 166 (342)
T ss_dssp EE--EEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGG
T ss_pred ce--ecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeeccc
Confidence 21 100000000 01112233456788999999999999999
Q ss_pred CceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-CCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 671 MSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-TGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 671 ~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-~~s~V~sLafSpdg~~LastsGssDg 749 (819)
.+.+..+.+|...+....+ ++.. +++|+ .|+.|++||+++++.+.... +...+.+++++ ++.+++ |+.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~--~~~~-l~s~~--~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s--~s~d~ 237 (342)
T d2ovrb2 167 ETCLHTLQGHTNRVYSLQF--DGIH-VVSGS--LDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVS--GNADS 237 (342)
T ss_dssp TEEEEEECCCSSCEEEEEE--CSSE-EEEEE--TTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEE--EETTS
T ss_pred ceeeEEEcCcccccccccC--CCCE-EEEEe--CCCeEEEeecccceeeeEecccccceeEEecC--CCEEEE--EcCCC
Confidence 9999999999888777666 4554 44554 89999999999999888775 45567776664 568887 78999
Q ss_pred eEEEEECCCCcEEEEEec---CCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 750 QILVWKYPTLTQVAKLTG---HSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 750 ~I~IWDl~s~k~l~sl~g---H~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
.|++||....+....+.+ |...+.++++ +++++++|+.||+|++||+.+++..++
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~ 295 (342)
T d2ovrb2 238 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRN 295 (342)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEecccccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEE
Confidence 999999999998888875 4456666666 567999999999999999999876544
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=6.7e-26 Score=230.46 Aligned_cols=283 Identities=13% Similarity=0.101 Sum_probs=212.8
Q ss_pred eEEEEEec--CCeEEEEECCCeEEEEEcCCCce-EEEEeccCCCCCeEEEEEcCCC-CEEEEEecCceEEEeecCCceEE
Q psy10114 515 YLNLVDWS--SQNVLSVGLGSCVYLWSACTSQV-TRLCDLSADGNSVTSVAWNERG-NLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS--~~~LLa~g~Dg~V~LWd~~tg~~-~~l~~l~~h~~~VtsLafSpdG-~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
.+++++|+ ++.|++++.|++|+|||+.++.. ..+....+|.+.|.+++|++++ .+|++|+.||.|++|+...+...
T Consensus 13 ~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~ 92 (342)
T d1yfqa_ 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccc
Confidence 47777776 56899999999999999976543 2333344689999999999864 68999999999999999988877
Q ss_pred EEEecCCCCeEEEEe---CCceeeeccCCCeEEEEECCCCCccceEE--Eecc--cCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 591 HKLVGHTARVGALAW---NGDMLSSGSRDRMILQRDVRTPNSQSERR--LVGH--RQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~--l~gH--~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
.....+...+....+ ++..+++++.|+.+++||++......... ...+ ........+.+++..+++++.|+.|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 172 (342)
T d1yfqa_ 93 QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQV 172 (342)
T ss_dssp EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEE
T ss_pred ccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcE
Confidence 776655444332222 67899999999999999987654322221 1122 2234556677888999999999999
Q ss_pred EEEECCCCceeE---EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee------EEE----------cC
Q psy10114 664 YVWNLHSMSPLQ---TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM------QCV----------DT 724 (819)
Q Consensus 664 ~IWDl~t~~~i~---t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v------~~l----------~~ 724 (819)
++||++..+... ....+...+.+.++.+.....+++++ .||.+.+|+....... ... .+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T d1yfqa_ 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL 250 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSS
T ss_pred EEEecccCcccceeeeecccccceeeeEeecCCCCEEEeec--CCCeEEEEEecCCcceeeccccceeeeeeeccCCCcc
Confidence 999998765432 23345566777777776666666665 8999999998654321 111 23
Q ss_pred CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 725 GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 725 ~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
...+.+++|+|++++|++ |+.||.|++||+.+++.+.++..+ ..+..++|+++|+.+++|+.|+++++|......
T Consensus 251 ~~~v~~l~~sp~~~~las--g~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~~~~ 325 (342)
T d1yfqa_ 251 AYPVNSIEFSPRHKFLYT--AGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325 (342)
T ss_dssp CCCEEEEEECTTTCCEEE--EETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSSSCTT
T ss_pred cccceeEEecCCccEEEE--ECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeeeeCCC
Confidence 456899999999999998 889999999999999999887643 345568889999999999999999999775544
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=3.5e-25 Score=239.69 Aligned_cols=249 Identities=18% Similarity=0.291 Sum_probs=191.6
Q ss_pred eccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce------EEEEEecCCCCeEEEEe------C---Cceeeecc
Q psy10114 550 DLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK------QVHKLVGHTARVGALAW------N---GDMLSSGS 614 (819)
Q Consensus 550 ~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk------~i~tl~gHs~~V~sLaw------n---g~~LaSGS 614 (819)
..++|.+.|.+++++ ++++++|+.||+|+|||..+.+ .......|...+..+.. + +..+++++
T Consensus 9 ~~~~H~~~I~~v~~~--~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 86 (393)
T d1sq9a_ 9 AGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 86 (393)
T ss_dssp ESSCSSSCEEEEEEC--SSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred cCCcccCccEEEEEe--CCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence 457899999999987 4699999999999999976542 23334455555444333 2 23678999
Q ss_pred CCCeEEEEECCCCCccceEE--------EecccCCeEEEEECCC-----CCEEEEEECCCeEEEEECCCCc---------
Q psy10114 615 RDRMILQRDVRTPNSQSERR--------LVGHRQEVCGLKWSPD-----NQYLASGGNDNRLYVWNLHSMS--------- 672 (819)
Q Consensus 615 ~DGtI~IWDi~t~~~~~v~~--------l~gH~~~VtsLafSpd-----g~~LaSGS~DGtI~IWDl~t~~--------- 672 (819)
.||.|++|++.......... ...+...+..++|.++ +.++++++.||.+++||+....
T Consensus 87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~ 166 (393)
T d1sq9a_ 87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 166 (393)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence 99999999987654321111 1224556778888775 4678999999999999974321
Q ss_pred --ee-------EEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc-------CCCCeEEEEEccC
Q psy10114 673 --PL-------QTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD-------TGSQVCNLAWSKH 736 (819)
Q Consensus 673 --~i-------~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~-------~~s~V~sLafSpd 736 (819)
.. .....+...+.+++|+|++ ++++|+ .|++|++||+.+++++..+. |...|.+++|+|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~lasgs--~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spd 242 (393)
T d1sq9a_ 167 WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242 (393)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eccceecccceecccCCCCcEEEEEECCCC--EEEEEe--CCCcEEEEeecccccccccccccccccccceEEEcccccc
Confidence 00 1112345668899999997 567765 89999999999998877653 5678999999999
Q ss_pred CCEEEEEEecCCC---eEEEEECCCCcEEEEEe-------------cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 737 SSELVSTHGYSQN---QILVWKYPTLTQVAKLT-------------GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 737 g~~LastsGssDg---~I~IWDl~s~k~l~sl~-------------gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
|+.|++ |+.|+ .|++||+.+++.+..+. +|.+.|++++|+|||++|+||+.|++|++||+.+
T Consensus 243 g~~l~s--gs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 243 GSLLAI--AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp TTEEEE--EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cceeee--ecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCC
Confidence 999999 55565 59999999999888774 7999999999999999999999999999999999
Q ss_pred Cceecc
Q psy10114 801 KVRSQR 806 (819)
Q Consensus 801 ~~~~~k 806 (819)
++....
T Consensus 321 g~~~~~ 326 (393)
T d1sq9a_ 321 KERITT 326 (393)
T ss_dssp TEEEEE
T ss_pred CCEEEE
Confidence 887644
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=3.7e-25 Score=226.38 Aligned_cols=257 Identities=14% Similarity=0.163 Sum_probs=199.4
Q ss_pred ceEEEEEecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 514 FYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 514 fyv~~ldwS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
-.+.+++|++ +++++.||.|++||..++ ..+|...|.++++++++ .+++++.|+++++|++.+.+
T Consensus 14 ~~I~~l~~s~--l~sgs~Dg~v~~Wd~~~~-------~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~----- 78 (287)
T d1pgua2 14 KGITALTVNP--LISGSYDGRIMEWSSSSM-------HQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHE----- 78 (287)
T ss_dssp SCEEEEETTT--TEEEETTSCEEETTTTEE-------ECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEE-----
T ss_pred CceEEEEECc--EEEEeCCCeEEEEECCCC-------CCCCCCCEEEEEecCCC-eEEEEeeccccccccccccc-----
Confidence 4578889976 999999999999998753 24688999999998754 67899999999999975432
Q ss_pred ecCCCCeEEEEeC-CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCC-eEEEEECCCC
Q psy10114 594 VGHTARVGALAWN-GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDN-RLYVWNLHSM 671 (819)
Q Consensus 594 ~gHs~~V~sLawn-g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DG-tI~IWDl~t~ 671 (819)
....+.++++. +..++..+.++.+.+|+..+++. ...+.. ...+ .+++++++.+++++.|+ .+++|++...
T Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~ 151 (287)
T d1pgua2 79 --FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDI--IKSVRL-NSPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDL 151 (287)
T ss_dssp --CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCE--EEEEEC-SSCE--EEEEECSSEEEEEETTTSCEEEEETTEE
T ss_pred --cccceeeeeeccCCceEEEeecccceeeeccceee--eeeccc-ccee--eeeeccCcceeeeccccceeeeeecccc
Confidence 23456677773 34455555667788898877653 233332 2333 45667788888888775 6999999876
Q ss_pred ceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--cCCCCeEEEEEccCC----------C
Q psy10114 672 SPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--DTGSQVCNLAWSKHS----------S 738 (819)
Q Consensus 672 ~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~~s~V~sLafSpdg----------~ 738 (819)
+....+. .+.+.+.+++|+|++..+++ |+ .||.|++||+.+++..... .+...|.+++|+|++ .
T Consensus 152 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~-g~--~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~ 228 (287)
T d1pgua2 152 EVSFDLKTPLRAKPSYISISPSETYIAA-GD--VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 228 (287)
T ss_dssp EEEEECSSCCSSCEEEEEECTTSSEEEE-EE--TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred ceeeeeeeccCCceeEEEeccCcccccc-cc--ccccccceeecccccccccccccccccceeeecccccccccccCCCC
Confidence 6655554 47788999999999986655 43 7999999999998876543 456789999998754 4
Q ss_pred EEEEEEecCCCeEEEEECCC-CcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 739 ELVSTHGYSQNQILVWKYPT-LTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 739 ~LastsGssDg~I~IWDl~s-~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
++++ |+.|+.|++||+++ .+.+..+.+|.+.|++++|++++ .|++++.||+|++|++
T Consensus 229 ~l~s--gs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 229 LVAT--GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EEEE--EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred eeEe--ecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 5666 88999999999976 55677778999999999999986 6889999999999996
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.9e-24 Score=215.82 Aligned_cols=237 Identities=24% Similarity=0.393 Sum_probs=193.2
Q ss_pred EEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCC
Q psy10114 548 LCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTP 627 (819)
Q Consensus 548 l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~ 627 (819)
+.....|...|+|++| ||++||+|+.||+|+|||++++++++++.+|.+.|.+++|++++|++|+.||.|++|++..+
T Consensus 8 i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~ 85 (293)
T d1p22a2 8 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTG 85 (293)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSC
T ss_pred EeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecccceeecccccccccccccccc
Confidence 3445677889998765 79999999999999999999999999999999999999999999999999999999999986
Q ss_pred CccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCce---eEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 628 NSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSP---LQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 628 ~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~---i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
... .....+... ...+......++++..++.+.+||..+... ...+..|...+..+.+.+. .+ .+++ .
T Consensus 86 ~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~-~~~s--~ 156 (293)
T d1p22a2 86 EML--NTLIHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YI-VSAS--G 156 (293)
T ss_dssp CEE--EEECCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT--EE-EEEE--T
T ss_pred ccc--ccccccccc--cccccccccceeecccccceeEeeccccccccccccccccccccccceeccc--cc-cccc--C
Confidence 632 233333222 334556677899999999999999987653 4455678889988888764 23 3443 7
Q ss_pred CCeEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE
Q psy10114 705 DRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA 783 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~ 783 (819)
|+.|++||.++++.+..+.. ...+..+.+ ++..+++ +..|+.|++||+.+.+.+....+|...+.. +++++.+
T Consensus 157 d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~ 230 (293)
T d1p22a2 157 DRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKR 230 (293)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEE--EETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSSE
T ss_pred CCceeeecCCCCcEEEEEcccccccccccC--CCCeEEE--ecCCCEEEEEecccceeeeeecccceeeee--ccccceE
Confidence 99999999999998888753 455666665 4567777 789999999999999999999999888865 5568889
Q ss_pred EEEEeCCCcEEEEECCCC
Q psy10114 784 IVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 784 LaSGS~DGtIrIWdl~s~ 801 (819)
|++|+.||.|++||+.+.
T Consensus 231 l~sg~~dg~i~iwd~~~~ 248 (293)
T d1p22a2 231 IVSGAYDGKIKVWDLVAA 248 (293)
T ss_dssp EEEEETTSCEEEEEHHHH
T ss_pred EEEEcCCCEEEEEECCCC
Confidence 999999999999998654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=3.1e-25 Score=225.47 Aligned_cols=253 Identities=10% Similarity=0.065 Sum_probs=185.7
Q ss_pred EeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceE---EEEEecCCCCeEEEEeC---CceeeeccCCCeEEEE
Q psy10114 549 CDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQ---VHKLVGHTARVGALAWN---GDMLSSGSRDRMILQR 622 (819)
Q Consensus 549 ~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~---i~tl~gHs~~V~sLawn---g~~LaSGS~DGtI~IW 622 (819)
.-.++|++.|++|+|+|+|++||+|+.||+|+|||+++++. +....+|.+.|.+++|+ +..+++|+.||.|++|
T Consensus 5 ~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w 84 (342)
T d1yfqa_ 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred EcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeee
Confidence 34578999999999999999999999999999999976543 33344799999999993 4589999999999999
Q ss_pred ECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe----cC--CCCEEEEEEcCCCCeE
Q psy10114 623 DVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT----EH--LAAVKAIAWSPHHHGL 696 (819)
Q Consensus 623 Di~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~----~h--~~~VtsLafSPdg~~L 696 (819)
+....... ......+........+.+++..+++++.|+++++||++.+....... .+ ........+.+.+..+
T Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (342)
T d1yfqa_ 85 DLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL 163 (342)
T ss_dssp CSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred eccccccc-ccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCce
Confidence 99886643 22223333444556667788899999999999999987554332221 11 2234455667777755
Q ss_pred EEEEccCCCCeEEEEECCCCceeEE----EcCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCCcE------EEE-
Q psy10114 697 LASGGGTADRCIRFWNTLTGQPMQC----VDTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTLTQ------VAK- 764 (819)
Q Consensus 697 LaSGgGs~DgtIrIWDl~tg~~v~~----l~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~k~------l~s- 764 (819)
+..+ .|+.|++||+.+++.... ......+.+..+.+ ++..+++ ++.||.+.+|+...... ...
T Consensus 164 ~~~~---~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~dg~~~v~~~~~~~~~~~~~~~~~~ 238 (342)
T d1yfqa_ 164 IVGM---NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC--SSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp EEEE---STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE--EETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred eeec---CCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEe--ecCCCeEEEEEecCCcceeecccccee
Confidence 5533 799999999987654322 23344555555554 5566666 77899999999754321 111
Q ss_pred --------EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 765 --------LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 765 --------l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
..+|...|++++|+|++++|+||+.||.|++||+.++++..+.
T Consensus 239 ~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~ 289 (342)
T d1yfqa_ 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred eeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEe
Confidence 1356778999999999999999999999999999998776543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=1.5e-24 Score=225.76 Aligned_cols=273 Identities=11% Similarity=0.058 Sum_probs=205.7
Q ss_pred EEEEe-cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc--eEEEeecCCceEEEEE
Q psy10114 517 NLVDW-SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG--YVQVWDVSVAKQVHKL 593 (819)
Q Consensus 517 ~~ldw-S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG--tI~IWDl~tgk~i~tl 593 (819)
..+++ +++.++++ .+|.|++||..+++..++ .|...|.+++|+|||+.|++++.+. .|++||.++++. ..+
T Consensus 8 ~~fSP~dG~~~a~~-~~g~v~v~d~~~~~~~~~----~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~ 81 (360)
T d1k32a3 8 EDFSPLDGDLIAFV-SRGQAFIQDVSGTYVLKV----PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKF 81 (360)
T ss_dssp EEEEECGGGCEEEE-ETTEEEEECTTSSBEEEC----SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EEC
T ss_pred ccccCCCCCEEEEE-ECCeEEEEECCCCcEEEc----cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEe
Confidence 34566 45566655 567999999998877653 5789999999999999998776553 799999987764 467
Q ss_pred ecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE----------CCC
Q psy10114 594 VGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG----------NDN 661 (819)
Q Consensus 594 ~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS----------~DG 661 (819)
..|...|.+++| ++++|++++.++.+++|+..+.+ ....+..|...+.+++|+|||++|+.++ .++
T Consensus 82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~ 159 (360)
T d1k32a3 82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159 (360)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred eCCCceEEeeeecccccccceeccccccccccccccc--eeeeeecccccccchhhccceeeeeeeccccccceeecccc
Confidence 789999999999 57799999999999999998866 3466778889999999999999998654 345
Q ss_pred eEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce-------eEEEc-----------
Q psy10114 662 RLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP-------MQCVD----------- 723 (819)
Q Consensus 662 tI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~-------v~~l~----------- 723 (819)
.+++||..+++.. ....+...+..++|+|+|+.++..+ .|+.+++||...... ...+.
T Consensus 160 ~~~v~d~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~s---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T d1k32a3 160 AIHVYDMEGRKIF-AATTENSHDYAPAFDADSKNLYYLS---YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235 (360)
T ss_dssp EEEEEETTTTEEE-ECSCSSSBEEEEEECTTSCEEEEEE---SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGC
T ss_pred ceeeeccccCcee-eecccccccccccccCCCCEEEEEe---CCCceEcccccccceeeccccceEEEecccCccccceE
Confidence 6999999887654 4455778889999999999877654 688999998654321 11110
Q ss_pred --------------------------CCCCeEEEEEccCCCEEEEE-----------EecCCCeEEEEECCCCcEEEEEe
Q psy10114 724 --------------------------TGSQVCNLAWSKHSSELVST-----------HGYSQNQILVWKYPTLTQVAKLT 766 (819)
Q Consensus 724 --------------------------~~s~V~sLafSpdg~~Last-----------sGssDg~I~IWDl~s~k~l~sl~ 766 (819)
.......+...+++...+.. .+..++.+++||+.+++..
T Consensus 236 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---- 311 (360)
T d1k32a3 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT---- 311 (360)
T ss_dssp CCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----
T ss_pred CCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----
Confidence 01122333333333222221 1446789999999887643
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 767 GHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 767 gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
.|.+.|.+++|||||++|++++.||.|++||+.+++...
T Consensus 312 ~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~ 350 (360)
T d1k32a3 312 EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350 (360)
T ss_dssp EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCE
T ss_pred EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 344569999999999999999999999999999887544
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.92 E-value=5.8e-22 Score=201.18 Aligned_cols=270 Identities=15% Similarity=0.153 Sum_probs=219.8
Q ss_pred EEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEE-EEecCceEEEeecCCceEEEEEecCCCCeEEEEe
Q psy10114 527 LSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA-VGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW 605 (819)
Q Consensus 527 La~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LA-sGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw 605 (819)
++.+.++.|.+||..+++..+...+ ...+..++|+|||++|+ +++.++.|++||+.+++.+.++..+.. +..++|
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~---g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~ 81 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAV 81 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEE
T ss_pred EEECCCCEEEEEECCCCeEEEEEEC---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccc
Confidence 5567889999999999988775544 35678999999999875 566789999999999999999987764 577888
Q ss_pred --CCc-eeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEE-EECCCeEEEEECCCCceeEEEecCC
Q psy10114 606 --NGD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLAS-GGNDNRLYVWNLHSMSPLQTYTEHL 681 (819)
Q Consensus 606 --ng~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaS-GS~DGtI~IWDl~t~~~i~t~~~h~ 681 (819)
++. .++++..++.+.+|+..+++. ...+. +.....++.++|+++.++. +..++.+.+|+..+++.+..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (301)
T d1l0qa2 82 SPDGKQVYVTNMASSTLSVIDTTSNTV--AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG- 157 (301)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-
T ss_pred ccccccccccccccceeeeccccccee--eeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC-
Confidence 344 566777889999999987652 23333 4566788999999998754 556788999999999888887644
Q ss_pred CCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE-ecCCCeEEEEECCCCc
Q psy10114 682 AAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH-GYSQNQILVWKYPTLT 760 (819)
Q Consensus 682 ~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts-GssDg~I~IWDl~s~k 760 (819)
..+..++++|++..+++++. .++.+.+|+....+..........+..++++++++.++++. +..++.|.+||..+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~ 235 (301)
T d1l0qa2 158 RSPKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (301)
T ss_dssp SSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred CCceEEEeeccccceeeecc--cccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCe
Confidence 56789999999998888765 67889999999888888888888899999999999987753 3446789999999999
Q ss_pred EEEEEecCCCCEEEEEEecCCCEE-EEEeCCCcEEEEECCCCceeccc
Q psy10114 761 QVAKLTGHSYRVLYLAMSPDGEAI-VTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 761 ~l~sl~gH~~~VtsLafSpDG~~L-aSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
.+..+..+ ..+.+++|+|||++| ++++.|++|++||+.+++.....
T Consensus 236 ~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~ 282 (301)
T d1l0qa2 236 ITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282 (301)
T ss_dssp EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 98888754 568999999999987 57778999999999998765443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=6.1e-24 Score=217.17 Aligned_cols=232 Identities=13% Similarity=0.132 Sum_probs=188.1
Q ss_pred EEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEEC
Q psy10114 546 TRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDV 624 (819)
Q Consensus 546 ~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi 624 (819)
..+..+.+|.++|++++|+| |++|+.||+|++||+.++. .+|...|.++++ ++..+++++.|+++++|++
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~ 74 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGI 74 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCSTTCCEEEETTTEEEETTE
T ss_pred ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCCCeEEEEeeccccccccc
Confidence 44567899999999999987 9999999999999987643 589999999999 4668899999999999987
Q ss_pred CCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCC
Q psy10114 625 RTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 625 ~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~ 704 (819)
...+ ....+.++++++++..+++ +.++.+.+|+..+++.+..+..+ ..+ .++++++..+++++. .
T Consensus 75 ~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~--~ 139 (287)
T d1pgua2 75 TKHE---------FGSQPKVASANNDGFTAVL-TNDDDLLILQSFTGDIIKSVRLN-SPG--SAVSLSQNYVAVGLE--E 139 (287)
T ss_dssp EEEE---------CSSCEEEEEECSSSEEEEE-ETTSEEEEEETTTCCEEEEEECS-SCE--EEEEECSSEEEEEET--T
T ss_pred cccc---------cccceeeeeeccCCceEEE-eecccceeeeccceeeeeecccc-cee--eeeeccCcceeeecc--c
Confidence 5421 2345778888888776665 45667899999999988887644 333 456677776666553 5
Q ss_pred CCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE-EEecCCCCEEEEEEecC-
Q psy10114 705 DRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA-KLTGHSYRVLYLAMSPD- 780 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~-sl~gH~~~VtsLafSpD- 780 (819)
++.+++|++.+.+...... +...+.+++|+|+++++++ |+.||.|++||+.+++... .+.+|..+|.+++|+|+
T Consensus 140 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~ 217 (287)
T d1pgua2 140 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA--GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE 217 (287)
T ss_dssp TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC
T ss_pred cceeeeeeccccceeeeeeeccCCceeEEEeccCcccccc--ccccccccceeecccccccccccccccccceeeecccc
Confidence 6789999998776655553 4567999999999999998 8899999999999888765 35789999999999874
Q ss_pred ---------CCEEEEEeCCCcEEEEECCCCce
Q psy10114 781 ---------GEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 781 ---------G~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
+.++++|+.|++|++||+.++..
T Consensus 218 ~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~ 249 (287)
T d1pgua2 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMK 249 (287)
T ss_dssp ------CCSCCEEEEEETTSCEEEEESSCTTC
T ss_pred cccccccCCCCeeEeecCCCeEEEEECCCCCe
Confidence 46899999999999999976443
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=4.9e-21 Score=196.56 Aligned_cols=272 Identities=11% Similarity=0.074 Sum_probs=205.2
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEE-EEecCceEEEeecCCceEEEEEecCCCC---
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVA-VGTHHGYVQVWDVSVAKQVHKLVGHTAR--- 599 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LA-sGs~DGtI~IWDl~tgk~i~tl~gHs~~--- 599 (819)
+++++++.|+.|++||..+++.........+...+.+++|+|||++++ +++.+|.|.+||+.+++.+..+..+...
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence 468999999999999999999887666666667789999999999874 5678999999999999999988766443
Q ss_pred --eEEEEe--CCceeeecc------------CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 600 --VGALAW--NGDMLSSGS------------RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 600 --V~sLaw--ng~~LaSGS------------~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
+..++| +++.+++++ .++.+.+||..+.+. ...+. +...+.+++|++||+++++++.+ +
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~--~ 156 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAFE-APRQITMLAWARDGSKLYGLGRD--L 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--EEEEE-CCSSCCCEEECTTSSCEEEESSS--E
T ss_pred cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeE--EEecc-ccCCceEEEEcCCCCEEEEEcCC--c
Confidence 335666 466666554 467888999988653 23333 45668899999999999998654 7
Q ss_pred EEEECCCCceeEEEecCCCCEEEEEEcCCCCeEE-------------EEEc--------cCCCCeEEEEECCCCceeEE-
Q psy10114 664 YVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLL-------------ASGG--------GTADRCIRFWNTLTGQPMQC- 721 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LL-------------aSGg--------Gs~DgtIrIWDl~tg~~v~~- 721 (819)
.+||..+++....+..+... ....+++++..+. .... +..++.+.+||..++.....
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T d1pbyb_ 157 HVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred ceeeeecCcEEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEE
Confidence 78999998887776543211 1111222221110 0110 12456799999998876543
Q ss_pred -EcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 722 -VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 722 -l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
..+...+..+++++++..++.. ++.|++||..+++.+..+. +...+.+++|+|||++|++++.|++|++||..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t 310 (337)
T d1pbyb_ 236 VRIMDVFYFSTAVNPAKTRAFGA----YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE----ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred ecCCCcceEEEEecccceEEEEc----cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 2456778899999999998873 5899999999999998886 566789999999999999999999999999998
Q ss_pred Cceecc
Q psy10114 801 KVRSQR 806 (819)
Q Consensus 801 ~~~~~k 806 (819)
.+...+
T Consensus 311 ~~~v~~ 316 (337)
T d1pbyb_ 311 LEKKGQ 316 (337)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 876554
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=1.9e-20 Score=205.15 Aligned_cols=277 Identities=10% Similarity=0.077 Sum_probs=199.2
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEE--EEe---cCCCCe
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVH--KLV---GHTARV 600 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~--tl~---gHs~~V 600 (819)
++++..||.|++||..+++.... +..+ ..+.+++|||||+++++++.||+|++||+.+++... .+. +|.+.+
T Consensus 35 ~V~~~~dg~v~vwD~~t~~~~~~--l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~ 111 (426)
T d1hzua2 35 SVTLRDAGQIALVDGDSKKIVKV--IDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE 111 (426)
T ss_dssp EEEETTTTEEEEEETTTCSEEEE--EECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCcEEEE--EeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence 45667789999999999988764 4444 469999999999999999999999999999886443 332 455555
Q ss_pred EEEEe--CCcee-eeccCCCeEEEEECCCCCccc----------------------------------------------
Q psy10114 601 GALAW--NGDML-SSGSRDRMILQRDVRTPNSQS---------------------------------------------- 631 (819)
Q Consensus 601 ~sLaw--ng~~L-aSGS~DGtI~IWDi~t~~~~~---------------------------------------------- 631 (819)
.+++| +|+++ +++..++.+.+||..+.....
T Consensus 112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~ 191 (426)
T d1hzua2 112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN 191 (426)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred EeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence 56666 56765 555588999999987643110
Q ss_pred -------eEEEecccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCCCceeEEEecC--CCCEEEEEEcCCCCeEEEEEc
Q psy10114 632 -------ERRLVGHRQEVCGLKWSPDNQYLASGG-NDNRLYVWNLHSMSPLQTYTEH--LAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 632 -------v~~l~gH~~~VtsLafSpdg~~LaSGS-~DGtI~IWDl~t~~~i~t~~~h--~~~VtsLafSPdg~~LLaSGg 701 (819)
.....++...+.++.|+|++++++++. .++.+.++|..+++.+...... ........+...+...+.+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (426)
T d1hzua2 192 YKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS 271 (426)
T ss_dssp CSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEE
T ss_pred eccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEec
Confidence 001123445567899999999877766 4567999999999887766532 222333444444443333333
Q ss_pred cCCCCeEEEEECCCC-------ceeEEEc-CCCCeEEEEEccCCCEEEEE-----EecCCCeEEEEECCCCcEEEEEe--
Q psy10114 702 GTADRCIRFWNTLTG-------QPMQCVD-TGSQVCNLAWSKHSSELVST-----HGYSQNQILVWKYPTLTQVAKLT-- 766 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg-------~~v~~l~-~~s~V~sLafSpdg~~Last-----sGssDg~I~IWDl~s~k~l~sl~-- 766 (819)
...|+.+.+|+.... +....+. ++..+..++|+|+++.+++. .+..+++|++||+.+++...++.
T Consensus 272 ~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~ 351 (426)
T d1hzua2 272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI 351 (426)
T ss_dssp CTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred cCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEecc
Confidence 346888999887653 5555554 46779999999999999963 14457899999999988776553
Q ss_pred -------cCCCCEEEEEEecCCCEEEEE-----eCCCcEEEEECCCCceec
Q psy10114 767 -------GHSYRVLYLAMSPDGEAIVTG-----AGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 767 -------gH~~~VtsLafSpDG~~LaSG-----S~DGtIrIWdl~s~~~~~ 805 (819)
.|..+|.+++|||||++++.+ +.||.|++||..+.+...
T Consensus 352 ~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~ 402 (426)
T d1hzua2 352 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKA 402 (426)
T ss_dssp HHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEE
T ss_pred chhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEE
Confidence 456779999999999977432 357889999999987654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.85 E-value=2.9e-19 Score=185.36 Aligned_cols=246 Identities=9% Similarity=0.034 Sum_probs=186.5
Q ss_pred eEEEEEecCC--eEEEEECCC--eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEE
Q psy10114 515 YLNLVDWSSQ--NVLSVGLGS--CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQV 590 (819)
Q Consensus 515 yv~~ldwS~~--~LLa~g~Dg--~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i 590 (819)
.+.++.|+++ .+++++.++ .|++||..+++..+ +..|...|.+++|+|+|++|++++.++.+.+|+.++++..
T Consensus 44 ~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~---~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 120 (360)
T d1k32a3 44 RIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK---FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT 120 (360)
T ss_dssp CEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE---CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE---eeCCCceEEeeeecccccccceecccccccccccccccee
Confidence 4667788754 576666553 69999999987654 5678899999999999999999999999999999999999
Q ss_pred EEEecCCCCeEEEEe--CCceee----------eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE
Q psy10114 591 HKLVGHTARVGALAW--NGDMLS----------SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG 658 (819)
Q Consensus 591 ~tl~gHs~~V~sLaw--ng~~La----------SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS 658 (819)
..+..|...+.+++| +|++|+ .+..++.+++||+.+++. .....+...+.+++|+|||+.|++++
T Consensus 121 ~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~~s 197 (360)
T d1k32a3 121 VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI---FAATTENSHDYAPAFDADSKNLYYLS 197 (360)
T ss_dssp EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE---EECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred eeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCce---eeecccccccccccccCCCCEEEEEe
Confidence 999999999999999 466776 355677899999987542 44556778889999999999999999
Q ss_pred CCCeEEEEECCCCce-------eEEEec------------------------------------CCCCEEEEEEcCCCCe
Q psy10114 659 NDNRLYVWNLHSMSP-------LQTYTE------------------------------------HLAAVKAIAWSPHHHG 695 (819)
Q Consensus 659 ~DGtI~IWDl~t~~~-------i~t~~~------------------------------------h~~~VtsLafSPdg~~ 695 (819)
.|+.+.+||...... ...... ..+....+...+++..
T Consensus 198 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
T d1k32a3 198 YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277 (360)
T ss_dssp SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEE
T ss_pred CCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCce
Confidence 999999998644321 111111 1122334444443332
Q ss_pred EEEEE----------ccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE
Q psy10114 696 LLASG----------GGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL 765 (819)
Q Consensus 696 LLaSG----------gGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl 765 (819)
.+... ++..++.+++||+.+++.... ...+.+++|+|||+.+++ +..||.|++||+++++...++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~~v~~~~~SpDG~~l~~--~~~Dg~i~v~d~~~~~~~~~~ 352 (360)
T d1k32a3 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV---KNNLTDLRLSADRKTVMV--RKDDGKIYTFPLEKPEDERTV 352 (360)
T ss_dssp EEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEE---EEEEEEEEECTTSCEEEE--EETTSCEEEEESSCTTSCEEC
T ss_pred EEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEEe---cCCcCEEEECCCCCEEEE--EECCCeEEEEECCCCCcceEE
Confidence 22211 134688999999998875433 345899999999999999 778999999999999887777
Q ss_pred ecCCCC
Q psy10114 766 TGHSYR 771 (819)
Q Consensus 766 ~gH~~~ 771 (819)
..+..+
T Consensus 353 ~~d~~~ 358 (360)
T d1k32a3 353 ETDKRP 358 (360)
T ss_dssp CCCSSC
T ss_pred Eecccc
Confidence 655544
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.84 E-value=1.1e-19 Score=201.23 Aligned_cols=271 Identities=12% Similarity=0.078 Sum_probs=192.1
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCce--EEEEEe---cCCCCe
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAK--QVHKLV---GHTARV 600 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk--~i~tl~---gHs~~V 600 (819)
+++.+.+|.|.|||..++++..... .+ ..+..++|||||+++++++.||.|++||+.+++ .+..+. +|.+.+
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~--~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~ 111 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLD--TG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE 111 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEE--CS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEe--CC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeE
Confidence 4778889999999999999877543 33 469999999999999999999999999998765 333333 455555
Q ss_pred EEEEe--CCcee-eeccCCCeEEEEECCCCCccceEEEec-----------ccCCeEEEEECCCCCEE-EEEECCCeEEE
Q psy10114 601 GALAW--NGDML-SSGSRDRMILQRDVRTPNSQSERRLVG-----------HRQEVCGLKWSPDNQYL-ASGGNDNRLYV 665 (819)
Q Consensus 601 ~sLaw--ng~~L-aSGS~DGtI~IWDi~t~~~~~v~~l~g-----------H~~~VtsLafSpdg~~L-aSGS~DGtI~I 665 (819)
.+.+| +|++| ++++.++.|++||..+++.. ..+.. +......+.++++|..+ ++...++.|.+
T Consensus 112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~ 189 (432)
T d1qksa2 112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK--KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 189 (432)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE--EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EecccCCCCCEEEEEcCCCCeEEEEeCccccce--eeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence 55555 57765 78888999999999987643 33222 34556788999999876 45566899999
Q ss_pred EECCCCceeEEEe-cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-------------------
Q psy10114 666 WNLHSMSPLQTYT-EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG------------------- 725 (819)
Q Consensus 666 WDl~t~~~i~t~~-~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~------------------- 725 (819)
||..+.+...... .+...+..++|+|+|+++++++. .++.+.++|..+++.+..+.++
T Consensus 190 ~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~--~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 267 (432)
T d1qksa2 190 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGP 267 (432)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred EEccCCCcceEEEEcccCccccceECCCCCEEEEecc--ccceEEEeecccceEEEEeccCccccccCcccceecCCCCc
Confidence 9998877554333 34567889999999998888875 6788999998876554332111
Q ss_pred --------------------------CCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC--------------------
Q psy10114 726 --------------------------SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL-------------------- 759 (819)
Q Consensus 726 --------------------------s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~-------------------- 759 (819)
..+....+++++..+++ +..++..++|+..+.
T Consensus 268 ~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~--~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~ 345 (432)
T d1qksa2 268 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFI--KTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTG 345 (432)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE--ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred eecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEE--EecCCccceeecccCCCCCCeeeEEEEEechhhcc
Confidence 12444556666555555 334444444432211
Q ss_pred ----cEEE--------EEecCCCCEEEEEEecCCCEEEEEe-----CCCcEEEEECCCCceec
Q psy10114 760 ----TQVA--------KLTGHSYRVLYLAMSPDGEAIVTGA-----GDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 760 ----k~l~--------sl~gH~~~VtsLafSpDG~~LaSGS-----~DGtIrIWdl~s~~~~~ 805 (819)
+.+. .+..|..+|.+++|||||++++.+. .||.|.+||..+.+...
T Consensus 346 ~s~d~~~k~w~~~~~~~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~ 408 (432)
T d1qksa2 346 DGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 408 (432)
T ss_dssp SSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred cccCCceEecccccccccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEe
Confidence 0111 1224667899999999999886553 46889999999987643
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.84 E-value=2e-19 Score=185.09 Aligned_cols=277 Identities=9% Similarity=0.034 Sum_probs=203.4
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecCceEEEeecCCceEEEEEecCCC--
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVGHTA-- 598 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~gHs~-- 598 (819)
+++++++++.++.|.+||+.+++......+. +...+.+++|+|||+++++ ++.++.|.+||+.+++.+..+.....
T Consensus 7 ~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~-~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~ 85 (346)
T d1jmxb_ 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 85 (346)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECS-SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCcEEEEEcCCCEEEEEECCCCCEEEEEEcC-CCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccccccc
Confidence 4668999999999999999999887765554 3456789999999998754 55789999999999999988764322
Q ss_pred ----CeEEEEe--CCceeeecc------------CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC
Q psy10114 599 ----RVGALAW--NGDMLSSGS------------RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND 660 (819)
Q Consensus 599 ----~V~sLaw--ng~~LaSGS------------~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D 660 (819)
.+..++| +|+.+++++ .++.+.+||..+++.............+..+.++++++.++++
T Consensus 86 ~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 162 (346)
T d1jmxb_ 86 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--- 162 (346)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES---
T ss_pred ccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC---
Confidence 2345667 566666554 4678899998876543222233334556677788888766543
Q ss_pred CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc-----------------------cCCCCeEEEEECCCCc
Q psy10114 661 NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG-----------------------GTADRCIRFWNTLTGQ 717 (819)
Q Consensus 661 GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg-----------------------Gs~DgtIrIWDl~tg~ 717 (819)
+.+.+||..+++.+..+..+. ....+.++|++..+++.+. +..++.+.+||..++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (346)
T d1jmxb_ 163 PDIYKMDVKTGKYTVALPLRN-WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 241 (346)
T ss_dssp SSEEEECTTTCCEEEEECSTT-CCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred CcceEEEccCCCEEEEEecCC-CccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCc
Confidence 568999999998888776432 2334445555443322211 1134568888988887
Q ss_pred eeEEE--cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 718 PMQCV--DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 718 ~v~~l--~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
..... .+...+..+.+++++..++.. .++.|.+||..+++.+..+. +...+.+++|||||++|++++.|+.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v 317 (346)
T d1jmxb_ 242 THTQEFADLTELYFTGLRSPKDPNQIYG---VLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAV 317 (346)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEE---EESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEE
T ss_pred eEEEEeecccceeEEEEEeCCCCEEEEe---cCCeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 65543 456778899999999888773 24689999999999988776 4457899999999999999999999999
Q ss_pred EECCCCceeccc
Q psy10114 796 WNVFSKVRSQRE 807 (819)
Q Consensus 796 Wdl~s~~~~~k~ 807 (819)
||+.+.+...+.
T Consensus 318 ~D~~t~~~i~~i 329 (346)
T d1jmxb_ 318 FNPDTLEKVKNI 329 (346)
T ss_dssp EETTTTEEEEEE
T ss_pred EECccCCEEEEE
Confidence 999998876543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=5.6e-18 Score=174.34 Aligned_cols=271 Identities=10% Similarity=0.129 Sum_probs=192.8
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEE---ecCCCCeE
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKL---VGHTARVG 601 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl---~gHs~~V~ 601 (819)
+++++.+++|++|++.+.....+.+...+.+.+.+++|+|||++|++++ .|+.|++|++.......++ ..+...+.
T Consensus 7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~ 86 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT 86 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCce
Confidence 4666788999999987554323333334678899999999999996655 4899999999765432222 23445566
Q ss_pred EEEe--CCceeeecc-CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-CCeEEEEECCCCceeEEE
Q psy10114 602 ALAW--NGDMLSSGS-RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-DNRLYVWNLHSMSPLQTY 677 (819)
Q Consensus 602 sLaw--ng~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-DGtI~IWDl~t~~~i~t~ 677 (819)
.++| +|++|++++ .++.|.+|+..............+...+.++.++|+++++++++. +..+.+|+..........
T Consensus 87 ~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (333)
T d1ri6a_ 87 HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 166 (333)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred EEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceee
Confidence 7888 567777776 577899999887665445555667778899999999998888775 457999998765433221
Q ss_pred ------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc----eeEEE-------cCCCCeEEEEEccCCCEE
Q psy10114 678 ------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ----PMQCV-------DTGSQVCNLAWSKHSSEL 740 (819)
Q Consensus 678 ------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~----~v~~l-------~~~s~V~sLafSpdg~~L 740 (819)
.........++|++++..++.+.. ..+...+++..... ..... ........++++++++.+
T Consensus 167 ~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~ 244 (333)
T d1ri6a_ 167 DPAEVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 244 (333)
T ss_dssp EEEEEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eceeeeeecCCCccEEEEeccceeEEeecc--ccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCce
Confidence 123456788999999998887765 67778888765432 11222 123457788999999988
Q ss_pred EEEEecCCCeEEEEECCCCcEEEEE---ecCCCCEEEEEEecCCCEEEEEe-CCCcEEEEECC
Q psy10114 741 VSTHGYSQNQILVWKYPTLTQVAKL---TGHSYRVLYLAMSPDGEAIVTGA-GDETLRFWNVF 799 (819)
Q Consensus 741 astsGssDg~I~IWDl~s~k~l~sl---~gH~~~VtsLafSpDG~~LaSGS-~DGtIrIWdl~ 799 (819)
++. +..++.+.+|++......... ......+.+++|+|||++|++++ .++.|++|+++
T Consensus 245 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 245 YAC-DRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp EEE-ETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred eee-cccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEE
Confidence 875 567889999998755433332 23445678899999999887765 46899999664
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.80 E-value=2.4e-16 Score=159.25 Aligned_cols=240 Identities=16% Similarity=0.103 Sum_probs=187.9
Q ss_pred EEecCCeEE-EEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEE-EecCceEEEeecCCceEEEEEecC
Q psy10114 519 VDWSSQNVL-SVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAV-GTHHGYVQVWDVSVAKQVHKLVGH 596 (819)
Q Consensus 519 ldwS~~~LL-a~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAs-Gs~DGtI~IWDl~tgk~i~tl~gH 596 (819)
++.+++.++ +++.++.|.+||..+++.... +..+ ..+..++|++++..+++ +..++.+.+|+..+++....+..+
T Consensus 39 ~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (301)
T d1l0qa2 39 ISPDGTKVYVANAHSNDVSIIDTATNNVIAT--VPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG 115 (301)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTTEEEEE--EECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCCceeee--eecc-ccccccccccccccccccccccceeeecccccceeeeecccc
Confidence 334456664 555789999999999877553 4333 45789999999986655 556789999999999988888765
Q ss_pred CCCeEEEEe--CCce-eeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-CeEEEEECCCCc
Q psy10114 597 TARVGALAW--NGDM-LSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-NRLYVWNLHSMS 672 (819)
Q Consensus 597 s~~V~sLaw--ng~~-LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-GtI~IWDl~t~~ 672 (819)
. ...++.+ ++.. ++++..++.+.+|+..+... ...+ .+...+..++++++++.+++++.+ +.+.+|+....+
T Consensus 116 ~-~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (301)
T d1l0qa2 116 K-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTV-SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (301)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred c-cceEEEeecCCCeeeeeeccccceeeeeccccce--eeec-ccCCCceEEEeeccccceeeeccccccccccccccee
Confidence 4 5567777 4554 46777889999999988653 2333 344568899999999988888765 567788877776
Q ss_pred eeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 673 PLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 673 ~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
...... ....+..+++++++..+++++.+..++.|++||..+++.+..+..+..+..++|+|||++++++ +..++.|.
T Consensus 192 ~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~l~va-~~~~~~i~ 269 (301)
T d1l0qa2 192 VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA-LSFCNTVS 269 (301)
T ss_dssp EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE-ETTTTEEE
T ss_pred eeeccc-ccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCEEEEE-ECCCCeEE
Confidence 666655 4456788999999999887766557789999999999999999888899999999999988654 66789999
Q ss_pred EEECCCCcEEEEEec
Q psy10114 753 VWKYPTLTQVAKLTG 767 (819)
Q Consensus 753 IWDl~s~k~l~sl~g 767 (819)
+||..+++.+.++..
T Consensus 270 v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 270 VIDTATNTITATMAV 284 (301)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCeEEEEEeC
Confidence 999999999988863
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.79 E-value=5e-18 Score=185.64 Aligned_cols=233 Identities=12% Similarity=0.118 Sum_probs=176.9
Q ss_pred EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEE---ecccCCeE
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRL---VGHRQEVC 643 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l---~gH~~~Vt 643 (819)
++++++.||+|+|||+.+++.+.++..|. .+..++| +|+++++++.||.|++||+.+++......+ .+|.+.+.
T Consensus 34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~ 112 (426)
T d1hzua2 34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES 112 (426)
T ss_dssp EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence 55778889999999999999999999875 5899999 688999999999999999998875443333 35666677
Q ss_pred EEEECCCCCEEEE-EECCCeEEEEECCCCceeEEEecCC-----------CCEEEEEEcCCCCeEEEEEccCCCCeEEEE
Q psy10114 644 GLKWSPDNQYLAS-GGNDNRLYVWNLHSMSPLQTYTEHL-----------AAVKAIAWSPHHHGLLASGGGTADRCIRFW 711 (819)
Q Consensus 644 sLafSpdg~~LaS-GS~DGtI~IWDl~t~~~i~t~~~h~-----------~~VtsLafSPdg~~LLaSGgGs~DgtIrIW 711 (819)
+++|+|||+++++ +..++.+.+||..+++++.....+. .....++.++++..++.+.. ..+.+.++
T Consensus 113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~--~~~~i~~~ 190 (426)
T d1hzua2 113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK--ETGKVLLV 190 (426)
T ss_dssp CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET--TTTEEEEE
T ss_pred eeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecC--CCCeEEEE
Confidence 7888999998755 4578999999999999887776543 34456677777776666654 45677777
Q ss_pred ECCCCce--eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEE-------------------------------------
Q psy10114 712 NTLTGQP--MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL------------------------------------- 752 (819)
Q Consensus 712 Dl~tg~~--v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~------------------------------------- 752 (819)
+..++.. +..+..+..+..+.++|++++++++. ..++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (426)
T d1hzua2 191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAA-NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS 269 (426)
T ss_dssp ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEE-TTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEE
T ss_pred EeccccceeeEEeccCCccEeeeECCCCcEEEeee-ecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEE
Confidence 7766543 34556778889999999999887752 2333333
Q ss_pred ----------EEECCC-------CcEEEEEecCCCCEEEEEEecCCCEEEE-------EeCCCcEEEEECCCCceec
Q psy10114 753 ----------VWKYPT-------LTQVAKLTGHSYRVLYLAMSPDGEAIVT-------GAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 753 ----------IWDl~s-------~k~l~sl~gH~~~VtsLafSpDG~~LaS-------GS~DGtIrIWdl~s~~~~~ 805 (819)
+|+... ++...++.+|...+..++|+|||++|++ ++.|++|++||+.+++...
T Consensus 270 ~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~ 346 (426)
T d1hzua2 270 TSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY 346 (426)
T ss_dssp EECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCC
T ss_pred eccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCe
Confidence 443321 2455667788888999999999999994 5568899999999877543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.75 E-value=2.2e-15 Score=158.54 Aligned_cols=272 Identities=9% Similarity=-0.057 Sum_probs=188.4
Q ss_pred ecCCeEEEE-----ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecC
Q psy10114 521 WSSQNVLSV-----GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVS 585 (819)
Q Consensus 521 wS~~~LLa~-----g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~ 585 (819)
.+++.++.. +..+.|++||..+++.... +..+. ...++|+|||++|++++ .++.|.+||..
T Consensus 30 pdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~--~~~~~--~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~ 105 (373)
T d2madh_ 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH--VNGGF--LPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCEEEEEcccccCCCceEEEEECCCCCEEEE--EeCCC--CccEEEcCCCCEEEEEeecCCcccccccceEEEEEECC
Confidence 345555443 2346799999999987653 44333 33799999999999875 45789999999
Q ss_pred CceEEEEEecCCCCeEEE-------Ee--CCceee--eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEE
Q psy10114 586 VAKQVHKLVGHTARVGAL-------AW--NGDMLS--SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYL 654 (819)
Q Consensus 586 tgk~i~tl~gHs~~V~sL-------aw--ng~~La--SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~L 654 (819)
+++.+..+..+......+ .| ++..++ ....++.+.+|+....+ ...+.....++.++++++.+
T Consensus 106 t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~s~~g~~~ 179 (373)
T d2madh_ 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS------DDQLLSSPTCYHIHPGAPST 179 (373)
T ss_pred CCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe------EEEEeccceeEEEecCCCcE
Confidence 999998888776655443 33 344332 22344566666665532 23344556788999998754
Q ss_pred -EEEECCCeEEEEECCCCceeEEEecC------CCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc----
Q psy10114 655 -ASGGNDNRLYVWNLHSMSPLQTYTEH------LAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD---- 723 (819)
Q Consensus 655 -aSGS~DGtI~IWDl~t~~~i~t~~~h------~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~---- 723 (819)
++.+.|+++.+||...++.......+ ........+++++..+ ..+ .++.+.+|+..++.......
T Consensus 180 ~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~v~~~~~~~~~~~~~~~~~~~ 255 (373)
T d2madh_ 180 FYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV-WPV---YSGKILQADISAAGATNKAPIDAL 255 (373)
T ss_pred EEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEE-Eec---CCceEEEEEcCCCeEEEEEeeccc
Confidence 67889999999999988776655432 2223445566665433 322 68899999988775432221
Q ss_pred ---------CCCCeEEEEEccCCCEEEEEE--------ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE--E
Q psy10114 724 ---------TGSQVCNLAWSKHSSELVSTH--------GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA--I 784 (819)
Q Consensus 724 ---------~~s~V~sLafSpdg~~Lasts--------GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~--L 784 (819)
.......+++++++..++... ...++.+.+||..+++.+..+. +...+.+++|+|||+. +
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~ 334 (373)
T d2madh_ 256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLY 334 (373)
T ss_pred cCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEE
Confidence 112345567777777665431 3456789999999999998775 5667899999999984 4
Q ss_pred EEEeCCCcEEEEECCCCceeccc
Q psy10114 785 VTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 785 aSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
++++.|++|++||+.+++.....
T Consensus 335 vt~~~d~~v~v~D~~tg~~~~~~ 357 (373)
T d2madh_ 335 ALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEeCCCCeEEEEECCCCCEEEEE
Confidence 68899999999999999876544
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.73 E-value=7.6e-16 Score=170.15 Aligned_cols=195 Identities=12% Similarity=0.014 Sum_probs=159.6
Q ss_pred CEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEE---ecccCCe
Q psy10114 568 NLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRL---VGHRQEV 642 (819)
Q Consensus 568 ~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l---~gH~~~V 642 (819)
-++++.+.||+|.|||.++++.+..+..+. .+..++| +|+++++++.||.|.+||+.+++......+ .+|.+.+
T Consensus 33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~ 111 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE 111 (432)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEE
T ss_pred EEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeE
Confidence 345888899999999999999999998774 6899999 688999999999999999988765433333 3455666
Q ss_pred EEEEECCCCCEE-EEEECCCeEEEEECCCCceeEEEecC-----------CCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 643 CGLKWSPDNQYL-ASGGNDNRLYVWNLHSMSPLQTYTEH-----------LAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 643 tsLafSpdg~~L-aSGS~DGtI~IWDl~t~~~i~t~~~h-----------~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
.+..|+|||+++ ++++.++.|++||..+++++..+..+ .....++.++|++..++++.. .++.|.+
T Consensus 112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~--~~~~i~~ 189 (432)
T d1qksa2 112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK--ETGKILL 189 (432)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET--TTTEEEE
T ss_pred EecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEc--cCCeEEE
Confidence 677788899986 67888999999999999988877643 445678899999998888875 7899999
Q ss_pred EECCCCce--eEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe
Q psy10114 711 WNTLTGQP--MQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT 766 (819)
Q Consensus 711 WDl~tg~~--v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~ 766 (819)
||..+++. +..+.++..+..++|+|+|++++++ +..++.+.++|..+++.+..+.
T Consensus 190 ~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va-~~~~~~v~v~d~~~~~~~~~~~ 246 (432)
T d1qksa2 190 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA-ANARNKLVVIDTKEGKLVAIED 246 (432)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE-EGGGTEEEEEETTTTEEEEEEE
T ss_pred EEccCCCcceEEEEcccCccccceECCCCCEEEEe-ccccceEEEeecccceEEEEec
Confidence 99988764 4456778889999999999998886 4567789999998877766543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.68 E-value=4.2e-15 Score=151.74 Aligned_cols=237 Identities=14% Similarity=0.077 Sum_probs=171.5
Q ss_pred EEecCCeEE-EEECCCeEEEEEcCCCceEEEEeccCC---CCCeEEEEEcCCCCEEEEEe------------cCceEEEe
Q psy10114 519 VDWSSQNVL-SVGLGSCVYLWSACTSQVTRLCDLSAD---GNSVTSVAWNERGNLVAVGT------------HHGYVQVW 582 (819)
Q Consensus 519 ldwS~~~LL-a~g~Dg~V~LWd~~tg~~~~l~~l~~h---~~~VtsLafSpdG~~LAsGs------------~DGtI~IW 582 (819)
++.+++.++ +++.++.|.+||..+++.......... ...+..++|+|+|+.++++. .++.+.+|
T Consensus 41 ~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 120 (337)
T d1pbyb_ 41 VAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred ECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeec
Confidence 444556664 555789999999999987665443221 23445799999999998876 35788999
Q ss_pred ecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCC-------------------
Q psy10114 583 DVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE------------------- 641 (819)
Q Consensus 583 Dl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~------------------- 641 (819)
|..+++....+..+ ..+.+++| ++.++++++.+ +.+||..+.+.. .....+...
T Consensus 121 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (337)
T d1pbyb_ 121 DAETLSRRKAFEAP-RQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLV--EDKPIQSWEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp ETTTTEEEEEEECC-SSCCCEEECTTSSCEEEESSS--EEEEETTTTEEE--EEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred cccCCeEEEecccc-CCceEEEEcCCCCEEEEEcCC--cceeeeecCcEE--EEeecCCccccceecCCcceeecccccc
Confidence 99999988888754 45677888 57788887655 667898775422 222221110
Q ss_pred ----eEEEEECCCCCEEEEEECCCeEEEEECCCCceeE-EEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCC
Q psy10114 642 ----VCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ-TYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTG 716 (819)
Q Consensus 642 ----VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~-t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg 716 (819)
........+......++.++.+.+||..+++... .+..+...+..+++++++..++. .++.|++||+.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~v~d~~~~ 270 (337)
T d1pbyb_ 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG-----AYNVLESFDLEKN 270 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEE-----EESEEEEEETTTT
T ss_pred ceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEE-----ccccEEEEECCCC
Confidence 0001111111222223334568999998887554 35567788899999999986654 3689999999999
Q ss_pred ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec
Q psy10114 717 QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG 767 (819)
Q Consensus 717 ~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g 767 (819)
+.+..+..+..+.+++|+|||+.+++ ++.++.|.+||..+++.+.+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~s~dG~~l~v--~~~~~~i~v~D~~t~~~v~~i~~ 319 (337)
T d1pbyb_ 271 ASIKRVPLPHSYYSVNVSTDGSTVWL--GGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEEEECSSCCCEEEECTTSCEEEE--ESBSSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEcCCCCEEEEEECCCCCEEEE--EeCCCcEEEEECCCCcEEEEEEC
Confidence 99999999999999999999999998 77899999999999999998874
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.64 E-value=3e-14 Score=147.95 Aligned_cols=270 Identities=13% Similarity=0.070 Sum_probs=178.3
Q ss_pred cCCeEEEEE-----CCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEE----------ecCceEEEeecCC
Q psy10114 522 SSQNVLSVG-----LGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVG----------THHGYVQVWDVSV 586 (819)
Q Consensus 522 S~~~LLa~g-----~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsG----------s~DGtI~IWDl~t 586 (819)
++..++... .++.|++||..+++...... . +....++|||||+.|++. ..||.|++||..+
T Consensus 12 dg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~--~--g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t 87 (355)
T d2bbkh_ 12 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMID--G--GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 87 (355)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEE--E--CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCEEEEEecccCCCcCeEEEEECCCCcEEEEEE--C--CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCC
Confidence 455555443 35679999999998765433 2 233479999999988764 3478999999999
Q ss_pred ceEEEEEecCCCC-------eEEEEe--CCceeeec--cCCCeEEEEECCCCCccceEEEeccc-------CCeEEEEEC
Q psy10114 587 AKQVHKLVGHTAR-------VGALAW--NGDMLSSG--SRDRMILQRDVRTPNSQSERRLVGHR-------QEVCGLKWS 648 (819)
Q Consensus 587 gk~i~tl~gHs~~-------V~sLaw--ng~~LaSG--S~DGtI~IWDi~t~~~~~v~~l~gH~-------~~VtsLafS 648 (819)
++.+..+..+... ...++| +++.++.+ +.+..+.+||..+++.. ..+..+. .....+.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 165 (355)
T d2bbkh_ 88 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK--RMLDVPDCYHIFPTAPDTFFMHC 165 (355)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE--EEEECCSEEEEEEEETTEEEEEE
T ss_pred CCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEe--eEEecCCcceEeecCCcceEEEc
Confidence 9998887644322 234566 46655544 56778999999886532 3333221 122334555
Q ss_pred CCCCEEEEEE-CCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEE--cC-
Q psy10114 649 PDNQYLASGG-NDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV--DT- 724 (819)
Q Consensus 649 pdg~~LaSGS-~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l--~~- 724 (819)
+|++.++... .++.+.+.+...... .+...+....+.+++..++.+. .++.+.+|+...++..... ..
T Consensus 166 ~dg~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~ 237 (355)
T d2bbkh_ 166 RDGSLAKVAFGTEGTPEITHTEVFHP-----EDEFLINHPAYSQKAGRLVWPT---YTGKIHQIDLSSGDAKFLPAVEAL 237 (355)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSC-----TTSCBCSCCEEETTTTEEEEEB---TTSEEEEEECTTSSCEECCCEESS
T ss_pred CCCCEEEEEecCCCeEEEEecccccc-----eecceeeeccccCCCCeEEEec---CCCeEEEEecCCCcEEEEeccCCc
Confidence 6655554432 233444444433322 2333445567777777666653 7999999999887643211 00
Q ss_pred ----------CCCeEEEEEccCCCEEEEEEecC--------CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCC--EE
Q psy10114 725 ----------GSQVCNLAWSKHSSELVSTHGYS--------QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGE--AI 784 (819)
Q Consensus 725 ----------~s~V~sLafSpdg~~LastsGss--------Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~--~L 784 (819)
......+++++++..++...... .+.|.+||..+++.+..+.. ...+.+++|+|||+ ++
T Consensus 238 ~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~ 316 (355)
T d2bbkh_ 238 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLY 316 (355)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEE
T ss_pred ccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecC-CCCEEEEEEcCCCCeEEE
Confidence 12234588999999988754221 25799999999999888764 35588999999998 45
Q ss_pred EEEeCCCcEEEEECCCCceecc
Q psy10114 785 VTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 785 aSGS~DGtIrIWdl~s~~~~~k 806 (819)
++++.|++|++||+.+++....
T Consensus 317 v~~~~d~~i~v~D~~tg~~~~~ 338 (355)
T d2bbkh_ 317 ALSTGDKTLYIHDAESGEELRS 338 (355)
T ss_dssp EEETTTTEEEEEETTTCCEEEE
T ss_pred EEECCCCEEEEEECCCCCEEEE
Confidence 6778899999999999986544
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.59 E-value=1.6e-14 Score=147.91 Aligned_cols=237 Identities=11% Similarity=-0.020 Sum_probs=174.5
Q ss_pred EEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCeEEEEe--CCcee-eeccCCCeEEEEECCCCCccceEEEe
Q psy10114 561 VAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARVGALAW--NGDML-SSGSRDRMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 561 LafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V~sLaw--ng~~L-aSGS~DGtI~IWDi~t~~~~~v~~l~ 636 (819)
++|+++++++++++.|++|.+||+++++.+++++ .|...+.+++| +|+++ ++++.++.|.+||+.+++.. ..+.
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~--~~~~ 79 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT--FHAN 79 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeee--eeec
Confidence 4789999999999999999999999999999987 45667889999 56655 67778999999999986532 2222
Q ss_pred c------ccCCeEEEEECCCCCEEEEEE------------CCCeEEEEECCCCceeEEEec--CCCCEEEEEEcCCCCeE
Q psy10114 637 G------HRQEVCGLKWSPDNQYLASGG------------NDNRLYVWNLHSMSPLQTYTE--HLAAVKAIAWSPHHHGL 696 (819)
Q Consensus 637 g------H~~~VtsLafSpdg~~LaSGS------------~DGtI~IWDl~t~~~i~t~~~--h~~~VtsLafSPdg~~L 696 (819)
. +...+..++|+|||+++++++ .++.+.+||..+++....+.. ....+..+.+++++. +
T Consensus 80 ~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 158 (346)
T d1jmxb_ 80 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-L 158 (346)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred ccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCE-E
Confidence 2 122456799999999988765 467899999888765444332 234556677777776 4
Q ss_pred EEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEE------------------------ecCCCeEE
Q psy10114 697 LASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTH------------------------GYSQNQIL 752 (819)
Q Consensus 697 LaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Lasts------------------------GssDg~I~ 752 (819)
+++ ++.+.+||..+++.+..+..+.....+.++|++..++... +..++.+.
T Consensus 159 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
T d1jmxb_ 159 YVA-----GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233 (346)
T ss_dssp EEE-----SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred EEe-----CCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEE
Confidence 443 3568999999999988887666666666666665443210 22345678
Q ss_pred EEECCCCcEEEE-EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 753 VWKYPTLTQVAK-LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 753 IWDl~s~k~l~s-l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+||..++..... ...|...+..+.+++++.+++.++. +.|++||..+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~ 287 (346)
T d1jmxb_ 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKA 287 (346)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEE
T ss_pred EEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEE
Confidence 888887776544 4568888999999999888887664 5799999998876543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.58 E-value=1.6e-13 Score=142.45 Aligned_cols=250 Identities=11% Similarity=0.025 Sum_probs=170.4
Q ss_pred ECCCeEEEEEcCCCceEEEEeccC-C----CCCeEEEEEcCCCCEEEEEe--cCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSA-D----GNSVTSVAWNERGNLVAVGT--HHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~-h----~~~VtsLafSpdG~~LAsGs--~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
+.++.|.+||..+++......... + ......++|+++|+.+++++ .+..+.+||..+++.+..+..+.... .
T Consensus 75 ~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 153 (355)
T d2bbkh_ 75 ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH-I 153 (355)
T ss_dssp EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE-E
T ss_pred CCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcce-E
Confidence 347889999999998776544321 1 12345689999999888775 45789999999999988887544322 1
Q ss_pred EEeCCceeeeccCCCeEEEEECCCCCccceEEE----ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE--E
Q psy10114 603 LAWNGDMLSSGSRDRMILQRDVRTPNSQSERRL----VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ--T 676 (819)
Q Consensus 603 Lawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l----~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~--t 676 (819)
....+...++.+.||....+............. ..+...+....+++++..++.++.++.+++|+...++... .
T Consensus 154 ~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 233 (355)
T d2bbkh_ 154 FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233 (355)
T ss_dssp EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCC
T ss_pred eecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEec
Confidence 122233344444555555554433321111111 1233345556788888899999999999999998775421 1
Q ss_pred EecC----------CCCEEEEEEcCCCCeEEEEEcc-------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCE
Q psy10114 677 YTEH----------LAAVKAIAWSPHHHGLLASGGG-------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSE 739 (819)
Q Consensus 677 ~~~h----------~~~VtsLafSPdg~~LLaSGgG-------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~ 739 (819)
...+ ......+++++++..+++.... ..++.|.+||..+++.+..+..+..+.+++|+|||+.
T Consensus 234 ~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~ 313 (355)
T d2bbkh_ 234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKP 313 (355)
T ss_dssp EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSC
T ss_pred cCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCCEEEEEEcCCCCe
Confidence 1111 1223458899999988776531 1235799999999999998888888999999999986
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 740 LVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 740 LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
++.+++..++.|.+||..+++.+.++.++......+.+..+
T Consensus 314 ~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~ 354 (355)
T d2bbkh_ 314 LLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354 (355)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred EEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence 54444778999999999999999999877555555555443
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.55 E-value=5.6e-12 Score=131.99 Aligned_cols=246 Identities=7% Similarity=-0.057 Sum_probs=170.8
Q ss_pred ECCCeEEEEEcCCCceEEEEeccCCC-----CCeEEEEEcCCCCEEEEEe--cCceEEEeecCCceEEEEEecCCCCeEE
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSADG-----NSVTSVAWNERGNLVAVGT--HHGYVQVWDVSVAKQVHKLVGHTARVGA 602 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~h~-----~~VtsLafSpdG~~LAsGs--~DGtI~IWDl~tgk~i~tl~gHs~~V~s 602 (819)
..++.|.+||..+++........... .....+.|+++++.+++.. .++.+.+|+....+...... ...+
T Consensus 94 ~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 169 (373)
T d2madh_ 94 KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS----SPTC 169 (373)
T ss_pred ccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec----ccee
Confidence 34678999999999876543322111 1224578999998776654 45678999988877665543 2345
Q ss_pred EEe--CCc-eeeeccCCCeEEEEECCCCCccceEEEe----cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeE
Q psy10114 603 LAW--NGD-MLSSGSRDRMILQRDVRTPNSQSERRLV----GHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 603 Law--ng~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~----gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~ 675 (819)
+.+ +++ .+++++.|+.+.+||............. +.........+++++. ++..+.++.+.+|+..+.....
T Consensus 170 ~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~ 248 (373)
T d2madh_ 170 YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATN 248 (373)
T ss_pred EEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEEE
Confidence 555 444 5678899999999999876543222111 1122234455666554 4556678899999988765322
Q ss_pred E--EecC----------CCCEEEEEEcCCCCeEEEEEc-------cCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccC
Q psy10114 676 T--YTEH----------LAAVKAIAWSPHHHGLLASGG-------GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736 (819)
Q Consensus 676 t--~~~h----------~~~VtsLafSPdg~~LLaSGg-------Gs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpd 736 (819)
. ...+ ......+++++++..++.... ...++.+.+||..+++.+..+..+..+..++|+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spD 328 (373)
T d2madh_ 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQD 328 (373)
T ss_pred EEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCC
Confidence 2 1111 223445677777766554321 12567899999999999999999999999999999
Q ss_pred CCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecC
Q psy10114 737 SSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPD 780 (819)
Q Consensus 737 g~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpD 780 (819)
|+.++.+++..|+.|++||..+++.+.++.++......+++.++
T Consensus 329 G~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~ 372 (373)
T d2madh_ 329 GGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE 372 (373)
T ss_pred CCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence 99765445889999999999999999999988777888887654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=1.3e-12 Score=133.46 Aligned_cols=232 Identities=11% Similarity=0.163 Sum_probs=166.4
Q ss_pred EEEEEecCceEEEeecCCceEEE--EEecCCCCeEEEEe--CCcee-eeccCCCeEEEEECCCCCccce-EEEecccCCe
Q psy10114 569 LVAVGTHHGYVQVWDVSVAKQVH--KLVGHTARVGALAW--NGDML-SSGSRDRMILQRDVRTPNSQSE-RRLVGHRQEV 642 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk~i~--tl~gHs~~V~sLaw--ng~~L-aSGS~DGtI~IWDi~t~~~~~v-~~l~gH~~~V 642 (819)
.+++++.|++|++||+++...+. ....|.+.+.+++| +|++| +++..|+.|.+|++........ .....+...+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p 85 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 85 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence 45677789999999997654333 23367889999999 56677 4555689999999987653322 2223345668
Q ss_pred EEEEECCCCCEEEEEEC-CCeEEEEECCCCceeEE--EecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee
Q psy10114 643 CGLKWSPDNQYLASGGN-DNRLYVWNLHSMSPLQT--YTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719 (819)
Q Consensus 643 tsLafSpdg~~LaSGS~-DGtI~IWDl~t~~~i~t--~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v 719 (819)
++++|+|||+++++++. ++.|.+|+......... ...+...+.++.++|+++.+++.+. .+..|.+|+..+....
T Consensus 86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~--~~~~i~~~~~~~~~~~ 163 (333)
T d1ri6a_ 86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL--KQDRICLFTVSDDGHL 163 (333)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG--GGTEEEEEEECTTSCE
T ss_pred eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeecccc--ccceeeEEEeccCCcc
Confidence 88999999999998875 66899999877654433 3456677889999999998888765 6788999998775433
Q ss_pred EE-------EcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCc----EEEEEe------cCCCCEEEEEEecCCC
Q psy10114 720 QC-------VDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLT----QVAKLT------GHSYRVLYLAMSPDGE 782 (819)
Q Consensus 720 ~~-------l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k----~l~sl~------gH~~~VtsLafSpDG~ 782 (819)
.. ...+.....++|++++..++.. ....+...+++..... ...... ........+++++|++
T Consensus 164 ~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~ 242 (333)
T d1ri6a_ 164 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV-NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 242 (333)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeeceeeeeecCCCccEEEEeccceeEEee-ccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccC
Confidence 21 2345667899999999998875 5567788888865322 222222 1234567889999999
Q ss_pred EEEE-EeCCCcEEEEECCCCce
Q psy10114 783 AIVT-GAGDETLRFWNVFSKVR 803 (819)
Q Consensus 783 ~LaS-GS~DGtIrIWdl~s~~~ 803 (819)
+++. +..++.+.+|++.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~ 264 (333)
T d1ri6a_ 243 HLYACDRTASLITVFSVSEDGS 264 (333)
T ss_dssp EEEEEETTTTEEEEEEECTTSC
T ss_pred ceeeecccCCeEEEEEEcCCCC
Confidence 7765 45678999999876543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.46 E-value=3.8e-12 Score=139.51 Aligned_cols=138 Identities=14% Similarity=0.214 Sum_probs=100.4
Q ss_pred EecCC-eEEEEECCCeEEEEEcCCCceEEEEe---ccCCCCCeEEEEEcCCCCEEEEEec---------CceEEEeecCC
Q psy10114 520 DWSSQ-NVLSVGLGSCVYLWSACTSQVTRLCD---LSADGNSVTSVAWNERGNLVAVGTH---------HGYVQVWDVSV 586 (819)
Q Consensus 520 dwS~~-~LLa~g~Dg~V~LWd~~tg~~~~l~~---l~~h~~~VtsLafSpdG~~LAsGs~---------DGtI~IWDl~t 586 (819)
.|.++ .++ ...++.+.+||+.+++...+.. +..+...|.+++|||||++|+.++. +|.+.|||+++
T Consensus 23 ~W~~d~~~~-~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~ 101 (470)
T d2bgra1 23 RWISDHEYL-YKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK 101 (470)
T ss_dssp EECSSSEEE-EESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred EeCCCCEEE-EEcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCC
Confidence 45533 233 3567889999999998766542 3445678999999999999998853 57889999998
Q ss_pred ceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEE-------Eec---------ccCCeEEEEEC
Q psy10114 587 AKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERR-------LVG---------HRQEVCGLKWS 648 (819)
Q Consensus 587 gk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~-------l~g---------H~~~VtsLafS 648 (819)
++ +..+..+...+..+.| +|+.++.. .++.+.+|+..+++...... +.+ ..+...++.||
T Consensus 102 ~~-~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wS 179 (470)
T d2bgra1 102 RQ-LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWS 179 (470)
T ss_dssp TE-ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEEC
T ss_pred Cc-ccccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEEC
Confidence 77 5567888999999999 57777774 56789999988765321111 111 12334668899
Q ss_pred CCCCEEEEEECC
Q psy10114 649 PDNQYLASGGND 660 (819)
Q Consensus 649 pdg~~LaSGS~D 660 (819)
|||+.||....|
T Consensus 180 PDGk~ia~~~~d 191 (470)
T d2bgra1 180 PNGTFLAYAQFN 191 (470)
T ss_dssp TTSSEEEEEEEE
T ss_pred CCCCccceeEec
Confidence 999999987654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.41 E-value=4.2e-12 Score=134.60 Aligned_cols=260 Identities=10% Similarity=-0.033 Sum_probs=172.1
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe----------cCceEEEeecCCceEEEEEecCCCC---
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT----------HHGYVQVWDVSVAKQVHKLVGHTAR--- 599 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs----------~DGtI~IWDl~tgk~i~tl~gHs~~--- 599 (819)
..|+++|..+++...... .+.. ..++|+|||+.|++++ .|+.|++||..+++.+..+..+...
T Consensus 46 ~~~~~~d~~~~~~~~~~~--~~~~--~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~ 121 (368)
T d1mdah_ 46 TENWVSCAGCGVTLGHSL--GAFL--SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEEETTTTEEEEEEE--ECTT--CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC
T ss_pred ceEEEEeCCCCcEEEEEe--CCCC--CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceec
Confidence 457888999998766443 2333 3589999999998865 3678999999999999888654322
Q ss_pred ----eEEEEe--CCceeeecc-CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCc
Q psy10114 600 ----VGALAW--NGDMLSSGS-RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMS 672 (819)
Q Consensus 600 ----V~sLaw--ng~~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~ 672 (819)
...++| +|+++++++ .++.+.+||+.+.+. ......+..... .......++..+.||++.+++.....
T Consensus 122 ~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~ 196 (368)
T d1mdah_ 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSC
T ss_pred ccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcE--eEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCc
Confidence 224666 677777665 679999999988653 233333322211 11123456666777888777776544
Q ss_pred eeEEE------ecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-------------CCCeEEEEE
Q psy10114 673 PLQTY------TEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-------------GSQVCNLAW 733 (819)
Q Consensus 673 ~i~t~------~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-------------~s~V~sLaf 733 (819)
..... ..+...+....+.+++..+.. .++.+.+++...+........ ......+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~ 271 (368)
T d1mdah_ 197 AAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA-----VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCEEETTTTEEEEC-----BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred eeeeeeecccccccccceeecccccCcEEEEe-----cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEE
Confidence 32221 223344556777777754332 456677777766554432211 112345788
Q ss_pred ccCCCEEEEEEecC-------CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCE--EEEEeCCCcEEEEECCCCcee
Q psy10114 734 SKHSSELVSTHGYS-------QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEA--IVTGAGDETLRFWNVFSKVRS 804 (819)
Q Consensus 734 Spdg~~LastsGss-------Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~--LaSGS~DGtIrIWdl~s~~~~ 804 (819)
++++..+++..... ...|.+||..+++.+..+.. ...+.+++|+|||+. +++++.|+.|++||..+++..
T Consensus 272 ~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~ 350 (368)
T d1mdah_ 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred cCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEE
Confidence 99999887753221 24699999999998887763 356889999999973 467778999999999998876
Q ss_pred ccc
Q psy10114 805 QRE 807 (819)
Q Consensus 805 ~k~ 807 (819)
...
T Consensus 351 ~~i 353 (368)
T d1mdah_ 351 SSV 353 (368)
T ss_dssp EEC
T ss_pred EEE
Confidence 543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.37 E-value=8e-12 Score=132.44 Aligned_cols=242 Identities=7% Similarity=-0.052 Sum_probs=165.9
Q ss_pred CCeEEEEEcCCCceEEEEeccCC-----CCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecCCCCeEEEEe
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSAD-----GNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGHTARVGALAW 605 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h-----~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw 605 (819)
++.|.+||..+++.........+ ......++|+|||++++++. .++.+.+||+.+++.+..+..+..... ...
T Consensus 95 d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~ 173 (368)
T d1mdah_ 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI-HPG 173 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC-EEE
T ss_pred CCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE-ccC
Confidence 57799999999987665443321 12234689999999998876 579999999999999998876554321 112
Q ss_pred CCceeeeccCCCeEEEEECCCCCccceE----EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe--c
Q psy10114 606 NGDMLSSGSRDRMILQRDVRTPNSQSER----RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT--E 679 (819)
Q Consensus 606 ng~~LaSGS~DGtI~IWDi~t~~~~~v~----~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~--~ 679 (819)
....+++.+.||.+..++.......... ....+...+....+.+++..+.+. ++.+.+++...+....... .
T Consensus 174 ~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~ 251 (368)
T d1mdah_ 174 AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCS
T ss_pred CCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeeccc
Confidence 4557778889999999998765432211 122344455667788887655543 4566677766554332211 1
Q ss_pred ----------CCCCEEEEEEcCCCCeEEEEEcc------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEE
Q psy10114 680 ----------HLAAVKAIAWSPHHHGLLASGGG------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVST 743 (819)
Q Consensus 680 ----------h~~~VtsLafSPdg~~LLaSGgG------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~Last 743 (819)
.......+++++++..+++...+ .....|.+||..+++.+..+..+..+..++|+|||+.++.+
T Consensus 252 ~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~ 331 (368)
T d1mdah_ 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYA 331 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEE
T ss_pred ccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEE
Confidence 01122457889998877765421 11246999999999999888877889999999999864433
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Q psy10114 744 HGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAM 777 (819)
Q Consensus 744 sGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLaf 777 (819)
++..++.|.+||..+++.+.++..... ...+++
T Consensus 332 s~~~~~~v~v~D~~tgk~~~~i~~g~~-P~~l~~ 364 (368)
T d1mdah_ 332 NSAGTEVLDIYDAASDQDQSSVELDKG-PESLSV 364 (368)
T ss_dssp EETTTTEEEEEESSSCEEEEECCCCSC-CCEEEC
T ss_pred EeCCCCeEEEEECCCCCEEEEEECCCC-CCEEEE
Confidence 477889999999999999998875433 344443
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.19 E-value=2.9e-10 Score=126.00 Aligned_cols=256 Identities=11% Similarity=0.044 Sum_probs=170.9
Q ss_pred EEEEECCCeEEEEEcCCCceEEEEec-cC---------------------------CCCCeEEEEEcCCCCEEEEEe-cC
Q psy10114 526 VLSVGLGSCVYLWSACTSQVTRLCDL-SA---------------------------DGNSVTSVAWNERGNLVAVGT-HH 576 (819)
Q Consensus 526 LLa~g~Dg~V~LWd~~tg~~~~l~~l-~~---------------------------h~~~VtsLafSpdG~~LAsGs-~D 576 (819)
+++++.+|+|.+|++.+++..+.... .. |.........+|||++|++.. .+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence 45778899999999998876553221 10 112234445578999987765 67
Q ss_pred ceEEEeecCCceEEEEEe-cCCCCeEEEEe--CCc--eeeeccCCC-----------------eEEEEECCCCCccceEE
Q psy10114 577 GYVQVWDVSVAKQVHKLV-GHTARVGALAW--NGD--MLSSGSRDR-----------------MILQRDVRTPNSQSERR 634 (819)
Q Consensus 577 GtI~IWDl~tgk~i~tl~-gHs~~V~sLaw--ng~--~LaSGS~DG-----------------tI~IWDi~t~~~~~v~~ 634 (819)
+.|.++|+++++..+.+. .+......++| +|+ +++.++.+. .+..+|..+.+.. ..
T Consensus 94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~--~q 171 (441)
T d1qnia2 94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVA--WQ 171 (441)
T ss_dssp TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEE--EE
T ss_pred CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceee--EE
Confidence 899999999999888776 45678888898 466 343333322 2344666654422 22
Q ss_pred EecccCCeEEEEECCCCCEEEEEECC-----------------------------------------CeEEEEECCCCce
Q psy10114 635 LVGHRQEVCGLKWSPDNQYLASGGND-----------------------------------------NRLYVWNLHSMSP 673 (819)
Q Consensus 635 l~gH~~~VtsLafSpdg~~LaSGS~D-----------------------------------------GtI~IWDl~t~~~ 673 (819)
... .+....+.++|||+++++.+.+ +.+.+++....+.
T Consensus 172 I~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v 250 (441)
T d1qnia2 172 VIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEF 250 (441)
T ss_dssp EEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSS
T ss_pred Eec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCce
Confidence 222 2457789999999998877643 2334444444455
Q ss_pred eEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce------------eEEEcCCCCeEEEEEccCCCEEE
Q psy10114 674 LQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP------------MQCVDTGSQVCNLAWSKHSSELV 741 (819)
Q Consensus 674 i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~------------v~~l~~~s~V~sLafSpdg~~La 741 (819)
+..+..... ...++++|||+++++++. .+++|.+||+.+.+. ....+.+-.....+|+++|....
T Consensus 251 ~~~IPvgks-PhGv~vSPDGkyl~~~~~--~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yt 327 (441)
T d1qnia2 251 TRYIPVPKN-PHGLNTSPDGKYFIANGK--LSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYT 327 (441)
T ss_dssp EEEECCBSS-CCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEE
T ss_pred EEEEeCCCC-ccCceECCCCCEEEEeCC--cCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEE
Confidence 566655444 467899999999999876 899999999865221 11112233455678999886554
Q ss_pred EEEecCCCeEEEEECCC---------C-cEEEEE-----ecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 742 STHGYSQNQILVWKYPT---------L-TQVAKL-----TGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 742 stsGssDg~I~IWDl~s---------~-k~l~sl-----~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
+ .+.|++|..|++.. . ..+..+ .||...+.+.+++|||++|++++.
T Consensus 328 s--~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k 388 (441)
T d1qnia2 328 T--LFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK 388 (441)
T ss_dssp E--ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred c--ccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence 4 78999999999731 1 233444 366666667789999999999943
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.02 E-value=1.5e-07 Score=100.44 Aligned_cols=274 Identities=9% Similarity=0.033 Sum_probs=160.1
Q ss_pred EEEEEC--CCeEEEE--EcCCCceEEEEecc-CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe--cCCC
Q psy10114 526 VLSVGL--GSCVYLW--SACTSQVTRLCDLS-ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV--GHTA 598 (819)
Q Consensus 526 LLa~g~--Dg~V~LW--d~~tg~~~~l~~l~-~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~--gHs~ 598 (819)
++.|+. ++.|+.. |.+++++..+.... .....+..|+++++++.|+++.. +.+..|.+.....+.... ....
T Consensus 5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~ 83 (365)
T d1jofa_ 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCC
Confidence 555543 4566555 55566554332221 23455677999999999988765 567788765432222221 1112
Q ss_pred CeEEEEe--CCc--eeeecc-CCCeEEEEECCC------------CCcc--ce-EEEecccCCeEEEEECCCCCEEEEEE
Q psy10114 599 RVGALAW--NGD--MLSSGS-RDRMILQRDVRT------------PNSQ--SE-RRLVGHRQEVCGLKWSPDNQYLASGG 658 (819)
Q Consensus 599 ~V~sLaw--ng~--~LaSGS-~DGtI~IWDi~t------------~~~~--~v-~~l~gH~~~VtsLafSpdg~~LaSGS 658 (819)
....+++ +++ +++++. ..+.|..+.+.. .... .. .........+.++.|+|||+++++++
T Consensus 84 ~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d 163 (365)
T d1jofa_ 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEee
Confidence 2223333 333 233222 234444433321 1100 00 00111223478999999999888876
Q ss_pred C-CCeEEEEECCCCcee---EEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee--EE---EcC---
Q psy10114 659 N-DNRLYVWNLHSMSPL---QTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM--QC---VDT--- 724 (819)
Q Consensus 659 ~-DGtI~IWDl~t~~~i---~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v--~~---l~~--- 724 (819)
. .+.|.+|+......+ .... ........++|+|+++.++++.. .+++|.+||...++.. .. ...
T Consensus 164 ~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e--~~~~V~v~~~~~~~~~~~~~~~~~~~~~~ 241 (365)
T d1jofa_ 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEecc--CCCEEEEEEecCCCceEEEEeeeeccccc
Confidence 4 457888876543222 1221 23467899999999998888875 7899999998765432 11 110
Q ss_pred ------------CCCeEEEEEccCCCEEEEEEecC----CCeEEEEECCCCcEEEEE---e---cCCCCEEEEEEec-CC
Q psy10114 725 ------------GSQVCNLAWSKHSSELVSTHGYS----QNQILVWKYPTLTQVAKL---T---GHSYRVLYLAMSP-DG 781 (819)
Q Consensus 725 ------------~s~V~sLafSpdg~~LastsGss----Dg~I~IWDl~s~k~l~sl---~---gH~~~VtsLafSp-DG 781 (819)
......+.++|+|++++++.... ...|..|++.....+... . .......+++++| +|
T Consensus 242 ~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G 321 (365)
T d1jofa_ 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred cccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCC
Confidence 11256789999999999864322 234777887643322211 1 2234567799998 89
Q ss_pred CEEEEE-eCCCcEEEEECCCCc
Q psy10114 782 EAIVTG-AGDETLRFWNVFSKV 802 (819)
Q Consensus 782 ~~LaSG-S~DGtIrIWdl~s~~ 802 (819)
++|+++ ..++.|.+|++..+.
T Consensus 322 ~~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 322 EWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETTE
T ss_pred CEEEEEeCCCCeEEEEEEeCCc
Confidence 988766 567899999986654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.00 E-value=1.8e-08 Score=111.28 Aligned_cols=227 Identities=11% Similarity=0.110 Sum_probs=161.4
Q ss_pred EEEEecCceEEEeecCCceEEEEEec------------------------------CCCCeEEE--EeCCcee-eeccCC
Q psy10114 570 VAVGTHHGYVQVWDVSVAKQVHKLVG------------------------------HTARVGAL--AWNGDML-SSGSRD 616 (819)
Q Consensus 570 LAsGs~DGtI~IWDl~tgk~i~tl~g------------------------------Hs~~V~sL--awng~~L-aSGS~D 616 (819)
+++|+.+|+|.+||+.+++.++++.- |....... ..+|++| ++...+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence 56778899999999999998887632 11222222 2367766 455678
Q ss_pred CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC--EEEEEECCC-----------------eEEEEECCCCceeEEE
Q psy10114 617 RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ--YLASGGNDN-----------------RLYVWNLHSMSPLQTY 677 (819)
Q Consensus 617 GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~--~LaSGS~DG-----------------tI~IWDl~t~~~i~t~ 677 (819)
+.|.++|+++.+...+. -..+...+.+++|+|+|+ +++.++++. .+..+|..+.+...++
T Consensus 94 ~rVavIDl~t~k~~~ii-~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI 172 (441)
T d1qnia2 94 TRVARIRLDIMKTDKIT-HIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV 172 (441)
T ss_dssp TEEEEEETTTTEEEEEE-ECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred CEEEEEECCCCcEeeEE-ecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence 89999999987643222 234567899999999998 455444432 2356888888877776
Q ss_pred ecCCCCEEEEEEcCCCCeEEEEEccCC--------------------------------------CCeEEEEECCCCcee
Q psy10114 678 TEHLAAVKAIAWSPHHHGLLASGGGTA--------------------------------------DRCIRFWNTLTGQPM 719 (819)
Q Consensus 678 ~~h~~~VtsLafSPdg~~LLaSGgGs~--------------------------------------DgtIrIWDl~tg~~v 719 (819)
... +....++++|+|+++++++.++. ++.+.+++..+.+.+
T Consensus 173 ~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~ 251 (441)
T d1qnia2 173 IVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFT 251 (441)
T ss_dssp EES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSE
T ss_pred ecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceE
Confidence 643 45688999999999888764211 345556666666677
Q ss_pred EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEE--------EEEecC---CCCEEEEEEecCCCEEEEEe
Q psy10114 720 QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQV--------AKLTGH---SYRVLYLAMSPDGEAIVTGA 788 (819)
Q Consensus 720 ~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l--------~sl~gH---~~~VtsLafSpDG~~LaSGS 788 (819)
..+..+.....+.++|||++++++ |..+++|.+||+.+.+.. ..+.++ .-.....+|+++|....+..
T Consensus 252 ~~IPvgksPhGv~vSPDGkyl~~~-~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~ 330 (441)
T d1qnia2 252 RYIPVPKNPHGLNTSPDGKYFIAN-GKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLF 330 (441)
T ss_dssp EEECCBSSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEET
T ss_pred EEEeCCCCccCceECCCCCEEEEe-CCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEccc
Confidence 778777788899999999998876 788999999998653321 111111 12356679999999888999
Q ss_pred CCCcEEEEECC
Q psy10114 789 GDETLRFWNVF 799 (819)
Q Consensus 789 ~DGtIrIWdl~ 799 (819)
.|..|..|++.
T Consensus 331 ~ds~v~kw~~~ 341 (441)
T d1qnia2 331 IDSQVCKWNIA 341 (441)
T ss_dssp TTTEEEEEEHH
T ss_pred ccceEEEeccc
Confidence 99999999985
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=6.6e-07 Score=88.84 Aligned_cols=238 Identities=14% Similarity=0.112 Sum_probs=151.4
Q ss_pred eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCc---eEEEeecCCceEEEEEecCCCCeEEEEe--CCc
Q psy10114 534 CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHG---YVQVWDVSVAKQVHKLVGHTARVGALAW--NGD 608 (819)
Q Consensus 534 ~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DG---tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~ 608 (819)
.|+|-|...++...+.. +...+.+.+|||||+.||....+. .+.+.+...+.. ..+..+.+......| +|.
T Consensus 20 ~l~i~d~dG~~~~~l~~---~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~ 95 (269)
T d2hqsa1 20 ELRVSDYDGYNQFVVHR---SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGS 95 (269)
T ss_dssp EEEEEETTSCSCEEEEE---ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSS
T ss_pred EEEEEcCCCCCcEEEec---CCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCC
Confidence 57787887766665543 346788999999999999775433 466666655543 455567778888888 455
Q ss_pred eeeecc-CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE-CCC--eEEEEECCCCceeEEEecCCCCE
Q psy10114 609 MLSSGS-RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG-NDN--RLYVWNLHSMSPLQTYTEHLAAV 684 (819)
Q Consensus 609 ~LaSGS-~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS-~DG--tI~IWDl~t~~~i~t~~~h~~~V 684 (819)
.++... .++...++....... ................++++++.++..+ .+| .|...+...+. ...........
T Consensus 96 ~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~-~~~~~~~~~~~ 173 (269)
T d2hqsa1 96 KLAFALSKTGSLNLYVMDLASG-QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-PQRITWEGSQN 173 (269)
T ss_dssp EEEEEECTTSSCEEEEEETTTC-CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-CEECCCSSSEE
T ss_pred eeeEeeecCCccceeecccccc-cceeeeeccccccccccccccccceecccccCCceEeeeeccccc-ceeeecccccc
Confidence 554433 333333333222221 1233333444555667788777655544 444 46666665554 33444566777
Q ss_pred EEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec-CCCeEEEEECCCCcEEE
Q psy10114 685 KAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY-SQNQILVWKYPTLTQVA 763 (819)
Q Consensus 685 tsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs-sDg~I~IWDl~s~k~l~ 763 (819)
....|+|+++.++..........+.+.|...+.. .............|||||+.|+.++.. ....+.++++..+.. .
T Consensus 174 ~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~-~ 251 (269)
T d2hqsa1 174 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-A 251 (269)
T ss_dssp EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE-E
T ss_pred cccccccccceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE-E
Confidence 8889999999998887533334555666665543 444455567788999999999875422 234688899876554 5
Q ss_pred EEecCCCCEEEEEEec
Q psy10114 764 KLTGHSYRVLYLAMSP 779 (819)
Q Consensus 764 sl~gH~~~VtsLafSp 779 (819)
.+....+.+...+|||
T Consensus 252 ~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 252 RLPATDGQVKFPAWSP 267 (269)
T ss_dssp ECCCSSSEEEEEEECC
T ss_pred EEeCCCCcEEeEEeCC
Confidence 5666777888899998
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.93 E-value=6e-09 Score=113.57 Aligned_cols=136 Identities=15% Similarity=0.135 Sum_probs=105.2
Q ss_pred EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec-----CCCCeEEEEe--CCceeeecc---------CCCeEEEE
Q psy10114 559 TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG-----HTARVGALAW--NGDMLSSGS---------RDRMILQR 622 (819)
Q Consensus 559 tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g-----Hs~~V~sLaw--ng~~LaSGS---------~DGtI~IW 622 (819)
.++.|.++++++.. .||.+.+||+.+++....+.. |...|.++.| +|+.|+.++ .++.+.+|
T Consensus 20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~ 97 (470)
T d2bgra1 20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (470)
T ss_dssp CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence 35789999987764 578899999999988776654 4577899999 577777764 35788999
Q ss_pred ECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec------------------CCCCE
Q psy10114 623 DVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE------------------HLAAV 684 (819)
Q Consensus 623 Di~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~------------------h~~~V 684 (819)
|+.+++. ..+..+...+....|||||+.+|... ++.+++|+..+++..+.... ..+..
T Consensus 98 d~~~~~~---~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~ 173 (470)
T d2bgra1 98 DLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (470)
T ss_dssp ETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred ECCCCcc---cccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCc
Confidence 9998653 45677888999999999999999964 57899999988876554322 12334
Q ss_pred EEEEEcCCCCeEEEEE
Q psy10114 685 KAIAWSPHHHGLLASG 700 (819)
Q Consensus 685 tsLafSPdg~~LLaSG 700 (819)
..+.|||||+.++...
T Consensus 174 ~~~~wSPDGk~ia~~~ 189 (470)
T d2bgra1 174 SALWWSPNGTFLAYAQ 189 (470)
T ss_dssp BCEEECTTSSEEEEEE
T ss_pred cccEECCCCCccceeE
Confidence 5688999999887764
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.88 E-value=2.2e-06 Score=87.31 Aligned_cols=234 Identities=13% Similarity=0.219 Sum_probs=163.6
Q ss_pred CeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecC------CCCeEEEEe--C-Cceee-eccCCCeEEEEECCC
Q psy10114 557 SVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGH------TARVGALAW--N-GDMLS-SGSRDRMILQRDVRT 626 (819)
Q Consensus 557 ~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gH------s~~V~sLaw--n-g~~La-SGS~DGtI~IWDi~t 626 (819)
....++++++|+.+++-..+..|++||.+ |+.+..+... ...-..+++ + +..++ ..+.++.|..++...
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 102 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG 102 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccc
Confidence 46899999999988777778899999964 7777766421 112344554 2 33333 344556777777543
Q ss_pred CCccceEEE-ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccC
Q psy10114 627 PNSQSERRL-VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGT 703 (819)
Q Consensus 627 ~~~~~v~~l-~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs 703 (819)
. ....+ ........+++..++|+.+++....+.+.++|. +++.+.++. .+......+++.+++. ++++..
T Consensus 103 ~---~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~-i~v~d~-- 175 (279)
T d1q7fa_ 103 Q---FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDN-- 175 (279)
T ss_dssp C---EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEG--
T ss_pred c---ceeecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeecccee-EEeeec--
Confidence 2 22222 233456789999999998888887888998885 456666653 3456788899999886 555544
Q ss_pred CCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC--CCCEEEEEEe
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH--SYRVLYLAMS 778 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH--~~~VtsLafS 778 (819)
..+.|++||. +|+.+..+.. ......+++.++|+.+++- ...++.|.+++ ++++.+.++... ......+++.
T Consensus 176 ~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad-~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~ 252 (279)
T d1q7fa_ 176 RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIAD-NHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALM 252 (279)
T ss_dssp GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEE-CSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEE
T ss_pred cccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEE-CCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEe
Confidence 6789999996 4666777743 3357899999999866652 33456799998 568877776533 3468899999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 779 PDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 779 pDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
+||.+++ ++.+..|++|+.....
T Consensus 253 ~dG~l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 253 DDGSVVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp TTTEEEE-EETTTEEEEEECSCCC
T ss_pred CCCcEEE-EeCCCeEEEEEeeeec
Confidence 9997554 5688999999987653
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=1e-06 Score=87.34 Aligned_cols=221 Identities=16% Similarity=0.181 Sum_probs=141.8
Q ss_pred eEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCC---CeEEEEECCCCCccceEEEecccCCeEEEEECCCCC
Q psy10114 578 YVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRD---RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ 652 (819)
Q Consensus 578 tI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~D---GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~ 652 (819)
.|.|.|.+ |...+.+..+...+.+.+| ||+.||....+ ..+.+.+..... ...+..+........|+|+|+
T Consensus 20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~spdg~ 95 (269)
T d2hqsa1 20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---VRQVASFPRHNGAPAFSPDGS 95 (269)
T ss_dssp EEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEEEECCSSCEEEEEECTTSS
T ss_pred EEEEEcCC-CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc---eeEEeeeecccccceecCCCC
Confidence 46666755 4444445555677888999 57777754332 346666666544 345566778889999999999
Q ss_pred EEEEEECC-Ce--EEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCCCeE
Q psy10114 653 YLASGGND-NR--LYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVC 729 (819)
Q Consensus 653 ~LaSGS~D-Gt--I~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s~V~ 729 (819)
.++..... +. +..+...... ...............+++++..++.+........|...+...+.............
T Consensus 96 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~ 174 (269)
T d2hqsa1 96 KLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ 174 (269)
T ss_dssp EEEEEECTTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEE
T ss_pred eeeEeeecCCccceeeccccccc-ceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeeccccccc
Confidence 98876643 22 3333333332 23333445555677788888887777642223356777777766555555566678
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC---CCcEEEEECCCCcee
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG---DETLRFWNVFSKVRS 804 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~---DGtIrIWdl~s~~~~ 804 (819)
...|+|+++.++... ...+...+|.............+........|||||+.|+..+. ...|.++++..+...
T Consensus 175 ~~~~spdg~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~ 251 (269)
T d2hqsa1 175 DADVSSDGKFMVMVS-SNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 251 (269)
T ss_dssp EEEECTTSSEEEEEE-ECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE
T ss_pred ccccccccceeEEEe-ecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 889999999998864 33444444443322222344456667788999999999875543 347899999877643
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.85 E-value=2.6e-06 Score=88.90 Aligned_cols=227 Identities=12% Similarity=0.145 Sum_probs=151.7
Q ss_pred CCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccC----CCeEEEEECCCCC
Q psy10114 555 GNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSR----DRMILQRDVRTPN 628 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~----DGtI~IWDi~t~~ 628 (819)
...+..++|.++|++.++-..+|.|..||.+.++..............+++ +|+.+++... .+.+...+.....
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~ 118 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 118 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence 344578999999997777778899999998887766666666677889999 4555554332 2344444544433
Q ss_pred ccceEEEe--cccCCeEEEEECCCCCEEEEEEC------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEE
Q psy10114 629 SQSERRLV--GHRQEVCGLKWSPDNQYLASGGN------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 629 ~~~v~~l~--gH~~~VtsLafSpdg~~LaSGS~------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSG 700 (819)
.. .... .-......+++.++|++.++... .+.+..++...+ .+..+...-...+.++|+|+++.++++.
T Consensus 119 ~~--~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~~~~~~pnGia~s~dg~~lyvad 195 (319)
T d2dg1a1 119 LQ--DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPIIQNISVANGIALSTDEKVLWVTE 195 (319)
T ss_dssp CE--EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred ee--eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEeeccceeeeeeeccccceEEEec
Confidence 21 1111 11234788999999997666432 133555555433 3333333344567899999999888876
Q ss_pred ccCCCCeEEEEECCCC-ceeEE----E----cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEe-----
Q psy10114 701 GGTADRCIRFWNTLTG-QPMQC----V----DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLT----- 766 (819)
Q Consensus 701 gGs~DgtIrIWDl~tg-~~v~~----l----~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~----- 766 (819)
. ..+.|..||+... ..... . ........+++.++|+..++ ....+.|.++| ++++.+.++.
T Consensus 196 ~--~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va--~~~~g~V~~~~-p~G~~l~~i~~P~~~ 270 (319)
T d2dg1a1 196 T--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQGRVLVFN-KRGYPIGQILIPGRD 270 (319)
T ss_dssp G--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTTEEEEEC-TTSCEEEEEECTTGG
T ss_pred c--cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEE--EcCCCEEEEEC-CCCcEEEEEeCCCcC
Confidence 5 6889999997642 21111 1 11233678999999997776 55789999999 5799888876
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeC
Q psy10114 767 -GHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 767 -gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
++...+++++|.+++..+++.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 271 EGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp GTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CCcCceeeeEEEeCCCCEEEEEcC
Confidence 33446889999998877766543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.84 E-value=3.2e-07 Score=94.80 Aligned_cols=226 Identities=12% Similarity=0.063 Sum_probs=155.4
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceE
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSER 633 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~ 633 (819)
..+..++++|||+++++...+++|..+|.... ...+......+.+++| +|+.+++...++.+..++..........
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~ 105 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 105 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceee
Confidence 35788999999999999999999988886533 3344556678899999 5778888888888888877654432211
Q ss_pred -EEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec----------CCCCEEEEEEcCCCCeEEEEEcc
Q psy10114 634 -RLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE----------HLAAVKAIAWSPHHHGLLASGGG 702 (819)
Q Consensus 634 -~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~----------h~~~VtsLafSPdg~~LLaSGgG 702 (819)
..........++++.++++.+++.+.++.+..+|...+........ .......+.++ +..++.+..
T Consensus 106 ~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~~~- 182 (302)
T d2p4oa1 106 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSNT- 182 (302)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEET-
T ss_pred ccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc--CCceeeecC-
Confidence 1123445688999999999999888899999999877653322211 12234556654 456666654
Q ss_pred CCCCeEEEEECCCCcee---EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEE--ecCCCCEEEEEE
Q psy10114 703 TADRCIRFWNTLTGQPM---QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKL--TGHSYRVLYLAM 777 (819)
Q Consensus 703 s~DgtIrIWDl~tg~~v---~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl--~gH~~~VtsLaf 777 (819)
..+.|..++....... ...........++++++|+..++ ...+++|..++.. ++..... .......++++|
T Consensus 183 -~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va--~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vaf 258 (302)
T d2p4oa1 183 -EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA--THIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAF 258 (302)
T ss_dssp -TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE--CBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEE
T ss_pred -CCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEE--EcCCCcEEEECCC-CCEEEEEecCCCCCCceEEEE
Confidence 7889998887664322 22223455678999999997666 5667889888754 4433222 234456899999
Q ss_pred ---ecCCCEEEEEeCC
Q psy10114 778 ---SPDGEAIVTGAGD 790 (819)
Q Consensus 778 ---SpDG~~LaSGS~D 790 (819)
++|++.|..++..
T Consensus 259 g~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 259 GQTEGDCTAIYVVTNG 274 (302)
T ss_dssp CCSTTTTTEEEEEECT
T ss_pred cCCCCCCCEEEEECCC
Confidence 6788888766543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.84 E-value=4e-07 Score=92.08 Aligned_cols=235 Identities=12% Similarity=0.040 Sum_probs=146.7
Q ss_pred CCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccce
Q psy10114 556 NSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSE 632 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v 632 (819)
..-.+++++++|+..++.. ..+.+..++..+........+-......+++ +++.+++....+.+++++-.... ..
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~--~~ 91 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ--TV 91 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC--EE
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccce--ee
Confidence 3458999999999766654 4577777765544332222221223456667 46666666666666655443322 11
Q ss_pred EEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEE
Q psy10114 633 RRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWN 712 (819)
Q Consensus 633 ~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWD 712 (819)
.. ........++++.++++.+++-..++.+..++..................++++++++. ++++.. .++.|..+|
T Consensus 92 ~~-~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-~~v~~~--~~~~i~~~d 167 (260)
T d1rwia_ 92 LP-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDT--DNNRVVKLE 167 (260)
T ss_dssp CC-CCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCC-EEEEEG--GGTEEEEEC
T ss_pred ee-eeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCC-Eeeecc--ccccccccc
Confidence 11 22235678999999999888777777788887655443222112234457899999987 444443 578899999
Q ss_pred CCCCceeEEE-cCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCC
Q psy10114 713 TLTGQPMQCV-DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDE 791 (819)
Q Consensus 713 l~tg~~v~~l-~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DG 791 (819)
.......... ........++++++|+..++ ....+.|..++.............-....+++++++|..+++-..++
T Consensus 168 ~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vs--d~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~ 245 (260)
T d1rwia_ 168 AESNNQVVLPFTDITAPWGIAVDEAGTVYVT--EHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 245 (260)
T ss_dssp TTTCCEEECCCSSCCSEEEEEECTTCCEEEE--ETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGT
T ss_pred cccceeeeeeccccCCCccceeeeeeeeeee--ecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCC
Confidence 8765443322 33456789999999987666 66778888887654332222123335678999999999888767777
Q ss_pred cEEEEEC
Q psy10114 792 TLRFWNV 798 (819)
Q Consensus 792 tIrIWdl 798 (819)
+|+..+.
T Consensus 246 rI~~i~~ 252 (260)
T d1rwia_ 246 RVVKLTS 252 (260)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 6665543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.74 E-value=3.9e-06 Score=87.62 Aligned_cols=237 Identities=9% Similarity=0.087 Sum_probs=154.2
Q ss_pred CCeEEEEEcCCCCEEEEEec-------CceEEEeecCCceEEEEEecC----CCCeEEEEeC--CceeeeccCCCeEEEE
Q psy10114 556 NSVTSVAWNERGNLVAVGTH-------HGYVQVWDVSVAKQVHKLVGH----TARVGALAWN--GDMLSSGSRDRMILQR 622 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~-------DGtI~IWDl~tgk~i~tl~gH----s~~V~sLawn--g~~LaSGS~DGtI~IW 622 (819)
.....++|.++|++.++... +|.|..||.++++........ .+.-..++++ ++.++++...+.|...
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~ 97 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence 44567899999997776432 467889998887654433321 2234578884 6677777777778888
Q ss_pred ECCCCCccceEEEeccc---CCeEEEEECCCCCEEEEEEC---------------CCeEEEEECCCCceeEEEecCCCCE
Q psy10114 623 DVRTPNSQSERRLVGHR---QEVCGLKWSPDNQYLASGGN---------------DNRLYVWNLHSMSPLQTYTEHLAAV 684 (819)
Q Consensus 623 Di~t~~~~~v~~l~gH~---~~VtsLafSpdg~~LaSGS~---------------DGtI~IWDl~t~~~i~t~~~h~~~V 684 (819)
|........ ....... .....+++.++|+..++-.. +|.|..++. .++.... ...-..-
T Consensus 98 ~~~g~~~~~-~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~-dg~~~~~-~~~~~~p 174 (314)
T d1pjxa_ 98 QTDGTFEEI-AKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT-DGQMIQV-DTAFQFP 174 (314)
T ss_dssp ETTSCEEEC-CSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT-TSCEEEE-EEEESSE
T ss_pred eCCCcEEEE-EeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEee-cCceeEe-eCCccee
Confidence 876543211 1111111 13577999999998776432 234555554 2333222 2233344
Q ss_pred EEEEEcCCCC----eEEEEEccCCCCeEEEEECCCCceeE------EEcC--CCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 685 KAIAWSPHHH----GLLASGGGTADRCIRFWNTLTGQPMQ------CVDT--GSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 685 tsLafSPdg~----~LLaSGgGs~DgtIrIWDl~tg~~v~------~l~~--~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
+.++|+|++. .++++.. ..+.|..||+.....+. .+.. ......+++..+|+..++ ....+.|.
T Consensus 175 NGi~~~~d~d~~~~~lyv~d~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa--~~~~g~I~ 250 (314)
T d1pjxa_ 175 NGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSSHIE 250 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTTEEE
T ss_pred eeeEECCCCCcceeEEEEEee--cccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEE--EcCCCEEE
Confidence 7889998765 4666543 78899999876433222 1111 123568999999997776 45678999
Q ss_pred EEECCCCcEEEEEecCCCCEEEEEEecCCCEE-EEEeCCCcEEEEECC
Q psy10114 753 VWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAI-VTGAGDETLRFWNVF 799 (819)
Q Consensus 753 IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~L-aSGS~DGtIrIWdl~ 799 (819)
+||...++....+......+++++|.+|++.| ++.+.+|.|...++.
T Consensus 251 ~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 99988887777777777789999999999755 566677877777764
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.55 E-value=1.3e-05 Score=80.67 Aligned_cols=229 Identities=10% Similarity=0.032 Sum_probs=140.5
Q ss_pred EEEEec--CCeEEEE-ECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 517 NLVDWS--SQNVLSV-GLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 517 ~~ldwS--~~~LLa~-g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
..++.+ ++..++. +..+.+..++..+.... ..... .......++++++|+.+++...++.+++++-.++..+...
T Consensus 17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-~~~~~-~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~ 94 (260)
T d1rwia_ 17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFN-GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 94 (260)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEEC----CEE-ECCCC-SCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEE-EeccC-CccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeee
Confidence 344444 3333433 33456666655443322 22222 2345678999999998888777777877776665554433
Q ss_pred ecCCCCeEEEEeC--CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 594 VGHTARVGALAWN--GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 594 ~gHs~~V~sLawn--g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
.+ .....+++++ ++++++-..+..+..++....... ...........+++++++++.+++...++.|..+|....
T Consensus 95 ~~-~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~ 171 (260)
T d1rwia_ 95 DG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 171 (260)
T ss_dssp CS-CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE--ECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred ee-eeecccccccccceeEeeccccccccccccccceee--eeeecccCCcceeeecCCCCEeeeccccccccccccccc
Confidence 32 3456788883 556666556666777766553321 111122345678999999998888888889999998765
Q ss_pred ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc--CCCCeEEEEEccCCCEEEEEEecCCC
Q psy10114 672 SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD--TGSQVCNLAWSKHSSELVSTHGYSQN 749 (819)
Q Consensus 672 ~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~--~~s~V~sLafSpdg~~LastsGssDg 749 (819)
...............++++++|. ++++.. ..+.|..++..... ..... .-.....++++++|+..++ ...++
T Consensus 172 ~~~~~~~~~~~~p~gi~~d~~g~-l~vsd~--~~~~i~~~~~~~~~-~~~~~~~~~~~P~~i~~d~~g~l~va--d~~~~ 245 (260)
T d1rwia_ 172 NQVVLPFTDITAPWGIAVDEAGT-VYVTEH--NTNQVVKLLAGSTT-STVLPFTGLNTPLAVAVDSDRTVYVA--DRGND 245 (260)
T ss_dssp CEEECCCSSCCSEEEEEECTTCC-EEEEET--TTTEEEEECTTCSC-CEECCCCSCCCEEEEEECTTCCEEEE--EGGGT
T ss_pred eeeeeeccccCCCccceeeeeee-eeeeec--CCCEEEEEeCCCCe-EEEEccCCCCCeEEEEEeCCCCEEEE--ECCCC
Confidence 43332224445678999999987 555543 57788888765443 22222 2256789999999986665 45567
Q ss_pred eEEEEEC
Q psy10114 750 QILVWKY 756 (819)
Q Consensus 750 ~I~IWDl 756 (819)
+|+.++.
T Consensus 246 rI~~i~~ 252 (260)
T d1rwia_ 246 RVVKLTS 252 (260)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 7776553
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.52 E-value=1.9e-05 Score=82.19 Aligned_cols=218 Identities=11% Similarity=0.126 Sum_probs=138.3
Q ss_pred CCeEEEEEcCCCceEEEEecc--CCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCC----CeEEEEe
Q psy10114 532 GSCVYLWSACTSQVTRLCDLS--ADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTA----RVGALAW 605 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~--~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~----~V~sLaw 605 (819)
++.|..||..+++........ ...+.-..++|.++|+.++++...+.|...|.+.+..........+ ..+.+++
T Consensus 45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~ 124 (314)
T d1pjxa_ 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAF 124 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEE
T ss_pred CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEE
Confidence 467899999888765433211 1123467899999999888888777788888765543221111111 2456777
Q ss_pred C--Cceeeecc---------------CCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCC-----EEEEEECCCeE
Q psy10114 606 N--GDMLSSGS---------------RDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQ-----YLASGGNDNRL 663 (819)
Q Consensus 606 n--g~~LaSGS---------------~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~-----~LaSGS~DGtI 663 (819)
+ |++.++-. .+|.|..++... + ...+...-..-.+++|+++++ ++++-+..+.|
T Consensus 125 d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~---~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i 200 (314)
T d1pjxa_ 125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-Q---MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKL 200 (314)
T ss_dssp CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-C---EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEE
T ss_pred CCCCCEEEecCccCcccccccceeccCCceEEEEeecC-c---eeEeeCCcceeeeeEECCCCCcceeEEEEEeecccce
Confidence 3 44444421 123454444432 1 122223334457899998764 44555677889
Q ss_pred EEEECCCCceeE------EEec-CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-CCCeEEEEEcc
Q psy10114 664 YVWNLHSMSPLQ------TYTE-HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-GSQVCNLAWSK 735 (819)
Q Consensus 664 ~IWDl~t~~~i~------t~~~-h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-~s~V~sLafSp 735 (819)
..+|+.....+. .+.. .......+++..+|+..++.. ..+.|.+||.++++....+.. ....++++|.+
T Consensus 201 ~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~---~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~ 277 (314)
T d1pjxa_ 201 WSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW---GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP 277 (314)
T ss_dssp EEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE---TTTEEEEECTTCBSCSEEEECSSSCEEEEEECT
T ss_pred EEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEc---CCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeC
Confidence 999876433222 1111 223457899999998555543 478999999988887777765 46789999999
Q ss_pred CCCEEEEEEecCCCeEEEEECC
Q psy10114 736 HSSELVSTHGYSQNQILVWKYP 757 (819)
Q Consensus 736 dg~~LastsGssDg~I~IWDl~ 757 (819)
+++.|+++ ...++.|..++++
T Consensus 278 d~~~lyVt-~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 278 QTKTIFVT-EHENNAVWKFEWQ 298 (314)
T ss_dssp TSSEEEEE-ETTTTEEEEEECS
T ss_pred CCCEEEEE-ECCCCcEEEEECC
Confidence 99887775 4567888888875
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.50 E-value=5e-05 Score=76.92 Aligned_cols=227 Identities=9% Similarity=0.110 Sum_probs=146.6
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEecc----CCCCCeEEEEEcCCC-CEEEEE-ecCceEEEeecCCceEEEEEe-c
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLS----ADGNSVTSVAWNERG-NLVAVG-THHGYVQVWDVSVAKQVHKLV-G 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~----~h~~~VtsLafSpdG-~~LAsG-s~DGtI~IWDl~tgk~i~tl~-g 595 (819)
++.+++-..++.|++||.+ ++........ +.......+++..+. ..+++. +.++.|..++. .++....+. .
T Consensus 34 g~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~ 111 (279)
T d1q7fa_ 34 NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGAT 111 (279)
T ss_dssp CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTT
T ss_pred CCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-cccceeecCCC
Confidence 3434443456778888865 4443322111 111234566666554 344433 34557777775 566666664 3
Q ss_pred CCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEE--ecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy10114 596 HTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRL--VGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSM 671 (819)
Q Consensus 596 Hs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l--~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~ 671 (819)
.......++. +++.+++....+.+.+++.... .+..+ ..+......+++.++++.+++....+.|++||. ++
T Consensus 112 ~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~---~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G 187 (279)
T d1q7fa_ 112 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EG 187 (279)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TC
T ss_pred cccccceeccccCCcEEEEeeccceeeEeccCCc---eeecccccccccccceeeeccceeEEeeeccccceeeeec-CC
Confidence 3455667777 4667777677778888876542 22332 345567889999999998888888899999996 55
Q ss_pred ceeEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC---CCCeEEEEEccCCCEEEEEEec
Q psy10114 672 SPLQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT---GSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 672 ~~i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~---~s~V~sLafSpdg~~LastsGs 746 (819)
+.+.++. +.......|++.++|+.+ ++.. ..++.|.+++ .+|+.+..+.. ......+++.++|..+++ .
T Consensus 188 ~~~~~~g~~g~~~~P~giavD~~G~i~-Vad~-~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~---~ 261 (279)
T d1q7fa_ 188 QYLRQIGGEGITNYPIGVGINSNGEIL-IADN-HNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLA---S 261 (279)
T ss_dssp CEEEEESCTTTSCSEEEEEECTTCCEE-EEEC-SSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEE---E
T ss_pred ceeeeecccccccCCcccccccCCeEE-EEEC-CCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEE---e
Confidence 6666663 234557899999999844 4432 1456799998 46877777643 345889999999975443 3
Q ss_pred CCCeEEEEECCCCcE
Q psy10114 747 SQNQILVWKYPTLTQ 761 (819)
Q Consensus 747 sDg~I~IWDl~s~k~ 761 (819)
.++.|++|.+....+
T Consensus 262 ~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 262 KDYRLYIYRYVQLAP 276 (279)
T ss_dssp TTTEEEEEECSCCCC
T ss_pred CCCeEEEEEeeeecC
Confidence 578999999876543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.41 E-value=0.00019 Score=73.63 Aligned_cols=219 Identities=8% Similarity=0.020 Sum_probs=144.9
Q ss_pred EEEEEcCCCC-EEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceeeeccCCCeEEEEECCCCCccceEEEe
Q psy10114 559 TSVAWNERGN-LVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLSSGSRDRMILQRDVRTPNSQSERRLV 636 (819)
Q Consensus 559 tsLafSpdG~-~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~ 636 (819)
.+..|++.+. +..+--..+.|.-||.++++.. .+. ....+.++++ ....++.++.+ .+..+|..+++........
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~~~-gl~~~d~~tg~~~~l~~~~ 97 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELE 97 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSS
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEEEeC-ccEEeecccceeeEEeeee
Confidence 3566876544 4444446788999998887643 232 3456788888 23344444555 5888998887643222111
Q ss_pred cc--cCCeEEEEECCCCCEEEEEECC----CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEE
Q psy10114 637 GH--RQEVCGLKWSPDNQYLASGGND----NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRF 710 (819)
Q Consensus 637 gH--~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrI 710 (819)
.. ...+..+.+.++|+..++...+ +.-.+|....++...... ....-..++|+++++.++.+.+ ..+.|..
T Consensus 98 ~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt--~~~~I~~ 174 (295)
T d2ghsa1 98 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDT--KVNRLMR 174 (295)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEET--TTCEEEE
T ss_pred cCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeec--ccceeeE
Confidence 11 2357889999999977665432 344566666665544443 3345578999999998888765 7888998
Q ss_pred EECCCC------ceeEEEc---CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe-cC
Q psy10114 711 WNTLTG------QPMQCVD---TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMS-PD 780 (819)
Q Consensus 711 WDl~tg------~~v~~l~---~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafS-pD 780 (819)
+++... +...... .......+++..+|+..++ ....+.|..|| ++++.+..+.-....+++++|- +|
T Consensus 175 ~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva--~~~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG~d 251 (295)
T d2ghsa1 175 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA--RWGEGAVDRYD-TDGNHIARYEVPGKQTTCPAFIGPD 251 (295)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE--EETTTEEEEEC-TTCCEEEEEECSCSBEEEEEEESTT
T ss_pred eeecccccccccceEEEeccCcccccccceEEcCCCCEEee--eeCCCceEEec-CCCcEeeEecCCCCceEEEEEeCCC
Confidence 886431 1111121 2345788999999987777 55678999999 6799999988766789999996 57
Q ss_pred CCEEEE
Q psy10114 781 GEAIVT 786 (819)
Q Consensus 781 G~~LaS 786 (819)
.+.|+.
T Consensus 252 ~~~Lyv 257 (295)
T d2ghsa1 252 ASRLLV 257 (295)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 666544
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.41 E-value=3.3e-05 Score=81.81 Aligned_cols=236 Identities=8% Similarity=0.045 Sum_probs=136.6
Q ss_pred ecCCeEEEEECCCeEEEEEcCC-CceEEEEeccCCCCCeEEEEEcCCCCEEEEEe---cCceEEEeecCC----------
Q psy10114 521 WSSQNVLSVGLGSCVYLWSACT-SQVTRLCDLSADGNSVTSVAWNERGNLVAVGT---HHGYVQVWDVSV---------- 586 (819)
Q Consensus 521 wS~~~LLa~g~Dg~V~LWd~~t-g~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs---~DGtI~IWDl~t---------- 586 (819)
.+++.+.++. ++.+..|.... +......... .......++++++++.+.+.. ..+.|..+.+..
T Consensus 49 ~d~~~ly~~~-~~~~~~~~i~~~~~~~~~~~~~-~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~ 126 (365)
T d1jofa_ 49 HERKNIYGAA-MKKWSSFAVKSPTEIVHEASHP-IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSV 126 (365)
T ss_dssp TTSSEEEEEE-BTEEEEEEEEETTEEEEEEEEE-CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEE
T ss_pred CCCCEEEEEe-CCcEEEEEEeCCCCeEEEeeec-CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEee
Confidence 3445555544 45666666543 2232221111 234456778888887543322 234555443321
Q ss_pred ---ceE---EEE-EecCCCCeEEEEe--CCceeeecc-CCCeEEEEECCCCCcc-ceEEE--ecccCCeEEEEECCCCCE
Q psy10114 587 ---AKQ---VHK-LVGHTARVGALAW--NGDMLSSGS-RDRMILQRDVRTPNSQ-SERRL--VGHRQEVCGLKWSPDNQY 653 (819)
Q Consensus 587 ---gk~---i~t-l~gHs~~V~sLaw--ng~~LaSGS-~DGtI~IWDi~t~~~~-~v~~l--~gH~~~VtsLafSpdg~~ 653 (819)
++. ... -......+.++.| +|+++++++ ....|.+++....... ..... .........++|+|++++
T Consensus 127 ~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~ 206 (365)
T d1jofa_ 127 SETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY 206 (365)
T ss_dssp CTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE
T ss_pred eecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCce
Confidence 111 111 1123345778999 566666654 4567888876543321 11111 123456889999999998
Q ss_pred EEEEE-CCCeEEEEECCCCceeEEE--e-----------------cCCCCEEEEEEcCCCCeEEEEEccC---CCCeEEE
Q psy10114 654 LASGG-NDNRLYVWNLHSMSPLQTY--T-----------------EHLAAVKAIAWSPHHHGLLASGGGT---ADRCIRF 710 (819)
Q Consensus 654 LaSGS-~DGtI~IWDl~t~~~i~t~--~-----------------~h~~~VtsLafSPdg~~LLaSGgGs---~DgtIrI 710 (819)
+.+.. .+++|.+||...++..... . .+......+.++|+|++++++..+. ....|..
T Consensus 207 ~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~ 286 (365)
T d1jofa_ 207 LYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred EEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEE
Confidence 86555 5789999998765432211 1 1122356789999999988875421 2234777
Q ss_pred EECCCCceeEEE-------cCCCCeEEEEEcc-CCCEEEEEEecCCCeEEEEECCCC
Q psy10114 711 WNTLTGQPMQCV-------DTGSQVCNLAWSK-HSSELVSTHGYSQNQILVWKYPTL 759 (819)
Q Consensus 711 WDl~tg~~v~~l-------~~~s~V~sLafSp-dg~~LastsGssDg~I~IWDl~s~ 759 (819)
|++.....+... ..+.....++++| +|++++++ +..++.|.+|+....
T Consensus 287 ~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va-~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 287 FKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT-DDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE-CSSSCEEEEEEEETT
T ss_pred EEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEE-eCCCCeEEEEEEeCC
Confidence 776553222211 2355678899998 78988885 567899999987543
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.38 E-value=1.9e-05 Score=87.00 Aligned_cols=274 Identities=9% Similarity=0.042 Sum_probs=157.1
Q ss_pred CCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe-cCCCCe----------
Q psy10114 532 GSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV-GHTARV---------- 600 (819)
Q Consensus 532 Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~-gHs~~V---------- 600 (819)
.+...++|+.+++...+.........+....|||||+.+|... ++.|.+.+...++.++... +..+.|
T Consensus 90 ~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vye 168 (465)
T d1xfda1 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (465)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred cccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhh
Confidence 4678999999998877654444456677789999999998876 5678888887776655443 222212
Q ss_pred -------EEEEe--CCceeeeccCC-C---------------------------------eEEEEECCCCCccceEE---
Q psy10114 601 -------GALAW--NGDMLSSGSRD-R---------------------------------MILQRDVRTPNSQSERR--- 634 (819)
Q Consensus 601 -------~sLaw--ng~~LaSGS~D-G---------------------------------tI~IWDi~t~~~~~v~~--- 634 (819)
.++.| +|+.|+....| . .+.++|+.++.......
T Consensus 169 ee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~ 248 (465)
T d1xfda1 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD 248 (465)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred hhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccC
Confidence 35556 45566553211 1 34455554433211000
Q ss_pred -EecccCCeEEEEECCCCCEEEEEECC----CeEEEEECCCCceeEEEecCC-CC----EEEEEEcCCCCeEEEEEccCC
Q psy10114 635 -LVGHRQEVCGLKWSPDNQYLASGGND----NRLYVWNLHSMSPLQTYTEHL-AA----VKAIAWSPHHHGLLASGGGTA 704 (819)
Q Consensus 635 -l~gH~~~VtsLafSpdg~~LaSGS~D----GtI~IWDl~t~~~i~t~~~h~-~~----VtsLafSPdg~~LLaSGgGs~ 704 (819)
......-+..+.|+++++.++...+. ..+.++|..+++....+.+.. +. -....|+++|+.++.......
T Consensus 249 ~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~ 328 (465)
T d1xfda1 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ 328 (465)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC
T ss_pred cCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeee
Confidence 01112236788999999866664432 258889999998766554322 21 234679999987643211012
Q ss_pred C--CeEEEEECC------CCceeEEEcC-CCCeEEE-EEccCCCEEEEEEecC-CCeEEEEE--CCCCcEEEEEe---cC
Q psy10114 705 D--RCIRFWNTL------TGQPMQCVDT-GSQVCNL-AWSKHSSELVSTHGYS-QNQILVWK--YPTLTQVAKLT---GH 768 (819)
Q Consensus 705 D--gtIrIWDl~------tg~~v~~l~~-~s~V~sL-afSpdg~~LastsGss-Dg~I~IWD--l~s~k~l~sl~---gH 768 (819)
+ +.+...++. .+..+..+.. .-.|..+ .|+.+++.++.++... -+.-.+|. +........+. ..
T Consensus 329 ~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~ 408 (465)
T d1xfda1 329 GGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE 408 (465)
T ss_dssp SSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSS
T ss_pred cccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCC
Confidence 2 234433321 2333333333 2345665 6899988887653221 12333444 33322222121 23
Q ss_pred CCCEEEEEEecCCCEEEEEeC---CCcEEEEECCCCceecc
Q psy10114 769 SYRVLYLAMSPDGEAIVTGAG---DETLRFWNVFSKVRSQR 806 (819)
Q Consensus 769 ~~~VtsLafSpDG~~LaSGS~---DGtIrIWdl~s~~~~~k 806 (819)
.....++.|||+|++++..+. --.+.+++..+++....
T Consensus 409 ~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~ 449 (465)
T d1xfda1 409 NCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFD 449 (465)
T ss_dssp SCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEE
Confidence 445678999999999885433 24688888887775443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.31 E-value=0.00011 Score=72.05 Aligned_cols=237 Identities=11% Similarity=0.065 Sum_probs=125.9
Q ss_pred Eec--CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEec-Cc-----eEEEeecCCceEEE
Q psy10114 520 DWS--SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTH-HG-----YVQVWDVSVAKQVH 591 (819)
Q Consensus 520 dwS--~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~-DG-----tI~IWDl~tgk~i~ 591 (819)
+++ |+.++-++ ++.|++.|+.+++..++. .+.+.+...+|||||+.||.... ++ .|.+.+..+++..+
T Consensus 7 sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt---~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~ 82 (281)
T d1k32a2 7 NPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIV---SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR 82 (281)
T ss_dssp EEEEETTEEEEEE-TTEEEEEETTTCCEEEEE---CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred CCCCCCCEEEEEe-CCcEEEEECCCCCEEEEe---cCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence 445 78776654 567999999999877653 34567889999999999986543 21 24444544444322
Q ss_pred EEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC------CeEEE
Q psy10114 592 KLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND------NRLYV 665 (819)
Q Consensus 592 tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D------GtI~I 665 (819)
. ..+. ..............|+|||+.++..... ..+..
T Consensus 83 l-t~~~-----------------------------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 126 (281)
T d1k32a2 83 I-TYFS-----------------------------------GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYR 126 (281)
T ss_dssp C-CCCC-----------------------------------EEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEE
T ss_pred e-eecC-----------------------------------CCccCccccccccccCCCCCEEEEEEccCCCccceeeee
Confidence 1 0000 0011112234567788888887765432 23445
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCC---------CCeEEEEECCCCceeEEEcCCCCeEEEEEccC
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTA---------DRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKH 736 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~---------DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpd 736 (819)
.+...+..... +...... .+.+++...+....... +..........+................++++
T Consensus 127 ~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (281)
T d1k32a2 127 VENDGINFVPL---NLGPATH-ILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH 202 (281)
T ss_dssp EEGGGTEEEEC---CSCSCSE-EEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT
T ss_pred ecCCCceeEEe---cCCccce-eeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeecc
Confidence 55544433221 1122222 33444444444322000 01122222223333333344455556666655
Q ss_pred CCEEEEEE-ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceec
Q psy10114 737 SSELVSTH-GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQ 805 (819)
Q Consensus 737 g~~Lasts-GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~ 805 (819)
. ++... ......|.++|+.+++.. .+..+.. .....|||||+.|+.. .++.|+++|+.+++...
T Consensus 203 ~--~~~~~~~~~~~~l~~~d~~g~~~~-~lt~~~~-~~~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~~ 267 (281)
T d1k32a2 203 R--IYFITDIDGFGQIYSTDLDGKDLR-KHTSFTD-YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEK 267 (281)
T ss_dssp E--EEEEECTTSSCEEEEEETTSCSCE-ECCCCCS-SCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEE
T ss_pred c--cceecccccccceEEEeCCCCceE-EeecCCC-cccccCcCCCCEEEEE-eCCEEEEEECCCCCEEE
Confidence 3 33321 223456888888766543 3332222 2234689999998864 46889999998887543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.29 E-value=5.2e-05 Score=77.60 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=137.9
Q ss_pred CceEEEEEecCCCCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeE
Q psy10114 586 VAKQVHKLVGHTARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRL 663 (819)
Q Consensus 586 tgk~i~tl~gHs~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI 663 (819)
..+.+..+.. ...+..+++ +|+++++...+++|..+|.... ...+......+.+++|++||+.+++...++.+
T Consensus 17 ~~~v~~~~p~-~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~----~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~ 91 (302)
T d2p4oa1 17 PAKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN----QQIHATVEGKVSGLAFTSNGDLVATGWNADSI 91 (302)
T ss_dssp CEEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC----EEEEEECSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred cccEEEECCC-CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC----EEEEEcCCCCcceEEEcCCCCeEEEecCCceE
Confidence 3444555542 224667888 6788889889999988886542 23445566789999999999999999888888
Q ss_pred EEEECCCCce-eEEEe--cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcC-----------CCCeE
Q psy10114 664 YVWNLHSMSP-LQTYT--EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDT-----------GSQVC 729 (819)
Q Consensus 664 ~IWDl~t~~~-i~t~~--~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~-----------~s~V~ 729 (819)
..++...... ...+. ........+++.+++.. +++.. .++.+..+|..++........ .....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~-~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 168 (302)
T d2p4oa1 92 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQY-LTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 168 (302)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEE-EEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred EEEEecccccceeeccccCCccccceeEEccCCCE-Eeecc--ccccceeeeccCCcceeEecCCccceeeccCcccccc
Confidence 8888654332 12221 23456789999999874 44433 678888899887754332211 12345
Q ss_pred EEEEccCCCEEEEEEecCCCeEEEEECCCCcEEE--EEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q psy10114 730 NLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVA--KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKV 802 (819)
Q Consensus 730 sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~--sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~ 802 (819)
.+.+ ++..++.+ ....+.|..++........ ...........+++++||++.++...++.|..++...+.
T Consensus 169 gi~~--~~~~l~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~ 240 (302)
T d2p4oa1 169 GLKR--FGNFLYVS-NTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRST 240 (302)
T ss_dssp EEEE--ETTEEEEE-ETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCE
T ss_pred cccc--cCCceeee-cCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCE
Confidence 5555 45556554 5678899988876543221 111123345679999999988888889999998876554
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=6.9e-05 Score=82.32 Aligned_cols=267 Identities=13% Similarity=0.111 Sum_probs=153.5
Q ss_pred ECCCeEEEEEcCCCceEEEEeccC-CCCCeEEEEEcCCCCEEEEEe---------cCceEEEeecCCceEEEEEe--cCC
Q psy10114 530 GLGSCVYLWSACTSQVTRLCDLSA-DGNSVTSVAWNERGNLVAVGT---------HHGYVQVWDVSVAKQVHKLV--GHT 597 (819)
Q Consensus 530 g~Dg~V~LWd~~tg~~~~l~~l~~-h~~~VtsLafSpdG~~LAsGs---------~DGtI~IWDl~tgk~i~tl~--gHs 597 (819)
..+|.|.+||+.+++...+..... ....+....|||||++++.+. ..|.+.++|+.+++...... ...
T Consensus 34 ~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~ 113 (465)
T d1xfda1 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113 (465)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCc
Confidence 456778999999887655544332 224677889999999988764 35788999999876543222 233
Q ss_pred CCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCC-----------------eEEEEECCCCCEEEEEE
Q psy10114 598 ARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQE-----------------VCGLKWSPDNQYLASGG 658 (819)
Q Consensus 598 ~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~-----------------VtsLafSpdg~~LaSGS 658 (819)
..+....| +|+.+|-.. ++.|.+.+..++.... .+..+..+. -.++.|||||++||...
T Consensus 114 ~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~-lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~ 191 (465)
T d1xfda1 114 AKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIR-VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (465)
T ss_dssp CCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEE-EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred cccceeeeccCCceEEEEe-cceEEEEecCCCceEE-EecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEE
Confidence 44445666 566766544 5677777776544221 111221111 25788999999999865
Q ss_pred CC-Ce---------------------------------EEEEECCCCceeEEEe------cCCCCEEEEEEcCCCCeEEE
Q psy10114 659 ND-NR---------------------------------LYVWNLHSMSPLQTYT------EHLAAVKAIAWSPHHHGLLA 698 (819)
Q Consensus 659 ~D-Gt---------------------------------I~IWDl~t~~~i~t~~------~h~~~VtsLafSPdg~~LLa 698 (819)
.| .. +.++|+.++....... ....-+..+.|+++++.++.
T Consensus 192 ~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~ 271 (465)
T d1xfda1 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (465)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEE
Confidence 32 22 3444444332211111 11223678899999875555
Q ss_pred EEcc-CCCCeEEEEECCCCceeEEEc--CCCC----eEEEEEccCCCEEEEEEe-cCC--CeEEEEECC------CCcEE
Q psy10114 699 SGGG-TADRCIRFWNTLTGQPMQCVD--TGSQ----VCNLAWSKHSSELVSTHG-YSQ--NQILVWKYP------TLTQV 762 (819)
Q Consensus 699 SGgG-s~DgtIrIWDl~tg~~v~~l~--~~s~----V~sLafSpdg~~LastsG-ssD--g~I~IWDl~------s~k~l 762 (819)
.... .....+.++|..+|+...... .+.. -....|+++|+.++.... ..+ +.+...++. .++.+
T Consensus 272 ~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~ 351 (465)
T d1xfda1 272 WLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNI 351 (465)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCC
T ss_pred EEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCcee
Confidence 4431 122368889999998765442 2222 245689999987654321 122 234433321 33334
Q ss_pred EEEecCCCCEEEE-EEecCCCEEE-EEeCCC--cEEEEEC
Q psy10114 763 AKLTGHSYRVLYL-AMSPDGEAIV-TGAGDE--TLRFWNV 798 (819)
Q Consensus 763 ~sl~gH~~~VtsL-afSpDG~~La-SGS~DG--tIrIWdl 798 (819)
..++...-.|..+ +|+.+++.|. ++..++ .-.+|.+
T Consensus 352 ~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v 391 (465)
T d1xfda1 352 QSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (465)
T ss_dssp CBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEE
Confidence 4444445556665 6888887765 444432 3345554
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.22 E-value=0.0006 Score=70.39 Aligned_cols=202 Identities=10% Similarity=0.054 Sum_probs=128.6
Q ss_pred CCeEEEEe--CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC----CCeEEEEECCCC
Q psy10114 598 ARVGALAW--NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN----DNRLYVWNLHSM 671 (819)
Q Consensus 598 ~~V~sLaw--ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~----DGtI~IWDl~t~ 671 (819)
..+..++| +|++.++-..++.|..+|..+... ............++++++||+.+++... .+.+...|....
T Consensus 40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~--~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~ 117 (319)
T d2dg1a1 40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI--KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 117 (319)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred cCcEeCEECCCCCEEEEECCCCEEEEEECCCCeE--EEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence 34457888 466666667788888888776542 2334445567889999999998877643 234566665555
Q ss_pred ceeEEEec--CCCCEEEEEEcCCCCeEEEEEccC---CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEec
Q psy10114 672 SPLQTYTE--HLAAVKAIAWSPHHHGLLASGGGT---ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGY 746 (819)
Q Consensus 672 ~~i~t~~~--h~~~VtsLafSPdg~~LLaSGgGs---~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGs 746 (819)
........ .......+++.++|...+....+. ..+.+..++...+........-...+.++|+++++.++++ ..
T Consensus 118 ~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyva-d~ 196 (319)
T d2dg1a1 118 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT-ET 196 (319)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE-EG
T ss_pred eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEe-cc
Confidence 54333322 234578899999998444321110 1234666665444333333333456789999999988775 45
Q ss_pred CCCeEEEEECCC-CcEEEE-------EecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCce
Q psy10114 747 SQNQILVWKYPT-LTQVAK-------LTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVR 803 (819)
Q Consensus 747 sDg~I~IWDl~s-~k~l~s-------l~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~ 803 (819)
..+.|..|++.. +..... ..........+++..+|++.++....+.|.++|-. ++.
T Consensus 197 ~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~-G~~ 260 (319)
T d2dg1a1 197 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYP 260 (319)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCE
T ss_pred cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCC-CcE
Confidence 678999999763 222111 11122346789999999998888899999999964 443
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.83 E-value=0.0087 Score=60.12 Aligned_cols=218 Identities=7% Similarity=0.035 Sum_probs=142.3
Q ss_pred CCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCceEEEEEecCCCCeEEEEeC--Cc-eeeeccCCCeEEEEECCCCCcc
Q psy10114 555 GNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GD-MLSSGSRDRMILQRDVRTPNSQ 630 (819)
Q Consensus 555 ~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~-~LaSGS~DGtI~IWDi~t~~~~ 630 (819)
...+.+++|...++.+.-.. .++.|+..++..+.....+......+.+++++ ++ ..++-...+.|.+.+++.....
T Consensus 35 ~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~ 114 (263)
T d1npea_ 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (263)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEE
Confidence 34577899998877777664 56788888887665555554444567777774 44 4456567789999998865432
Q ss_pred ceEEEecccCCeEEEEECCCCCEEEEEECC---CeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCe
Q psy10114 631 SERRLVGHRQEVCGLKWSPDNQYLASGGND---NRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRC 707 (819)
Q Consensus 631 ~v~~l~gH~~~VtsLafSpdg~~LaSGS~D---GtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~Dgt 707 (819)
...........+++.+|...++...... ..|.--++............-....++++++.++.++.+.. ..+.
T Consensus 115 --~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~--~~~~ 190 (263)
T d1npea_ 115 --VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA--GTHR 190 (263)
T ss_dssp --EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEET--TTTE
T ss_pred --EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeC--CCCE
Confidence 2223334678999999977766654322 23555566544433333334456789999998888888754 5789
Q ss_pred EEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEec
Q psy10114 708 IRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTG-HSYRVLYLAMSP 779 (819)
Q Consensus 708 IrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~g-H~~~VtsLafSp 779 (819)
|...|+..+.....+.......++++. +..++.+ -...+.|...|..+++....+.. ......++++.+
T Consensus 191 I~~~~~~g~~~~~v~~~~~~P~~lav~--~~~lYwt-d~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~ 260 (263)
T d1npea_ 191 AECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYT-DWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL 260 (263)
T ss_dssp EEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEE-ETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred EEEEECCCCCeEEEECCCCCcEEEEEE--CCEEEEE-ECCCCEEEEEECCCCccceEECCCCCCCcceEEEeC
Confidence 999999765544444433445677774 5566664 44678899999988888766642 233444555544
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.73 E-value=0.021 Score=57.21 Aligned_cols=231 Identities=9% Similarity=-0.005 Sum_probs=145.7
Q ss_pred EEEEEecCceEEEeecCCce-----EEEEEecCCCCeEEEEeC--Cc-eeeeccCCCeEEEEECCCCCccceEEEecccC
Q psy10114 569 LVAVGTHHGYVQVWDVSVAK-----QVHKLVGHTARVGALAWN--GD-MLSSGSRDRMILQRDVRTPNSQSERRLVGHRQ 640 (819)
Q Consensus 569 ~LAsGs~DGtI~IWDl~tgk-----~i~tl~gHs~~V~sLawn--g~-~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~ 640 (819)
+|+.+.. +.|+-.+++... ....+..+...+.+++|+ .+ ...+-..++.|...+++..... ........
T Consensus 3 fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~--~v~~~~~~ 79 (263)
T d1npea_ 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDLG 79 (263)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTCC
T ss_pred EEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE--EEEEeccc
Confidence 4444333 456666654332 122233344456778884 44 4445566788988888765432 22333345
Q ss_pred CeEEEEECCCCCEEE-EEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCcee
Q psy10114 641 EVCGLKWSPDNQYLA-SGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 719 (819)
Q Consensus 641 ~VtsLafSpdg~~La-SGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v 719 (819)
.+.++++..-++.|. +-...+.|.+.++........+.........++++|....++.+..|.....|.--++......
T Consensus 80 ~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~ 159 (263)
T d1npea_ 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (263)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred cccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce
Confidence 788999987666555 4456779999998766544344444567899999999888887765434445666677654433
Q ss_pred EEEc-CCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEEC
Q psy10114 720 QCVD-TGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNV 798 (819)
Q Consensus 720 ~~l~-~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl 798 (819)
.... .-.....+++++.++.++.+ ....+.|...++........+.+-. ...++++. ++....+-..++.|...|.
T Consensus 160 ~i~~~~~~~P~glaiD~~~~~lYw~-d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~lav~-~~~lYwtd~~~~~I~~~~~ 236 (263)
T d1npea_ 160 ILAQDNLGLPNGLTFDAFSSQLCWV-DAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSY-GKNLYYTDWKTNSVIAMDL 236 (263)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTEEEEEEEEECCC-SEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred eeeeecccccceEEEeecCcEEEEE-eCCCCEEEEEECCCCCeEEEECCCC-CcEEEEEE-CCEEEEEECCCCEEEEEEC
Confidence 3332 33567899999998888775 3467899999987555444444433 35678875 3434445456788988898
Q ss_pred CCCceec
Q psy10114 799 FSKVRSQ 805 (819)
Q Consensus 799 ~s~~~~~ 805 (819)
.+++...
T Consensus 237 ~~g~~~~ 243 (263)
T d1npea_ 237 AISKEMD 243 (263)
T ss_dssp TTTEEEE
T ss_pred CCCccce
Confidence 8777544
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.71 E-value=0.038 Score=56.77 Aligned_cols=251 Identities=12% Similarity=0.110 Sum_probs=166.6
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEe-CCceee
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAW-NGDMLS 611 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw-ng~~La 611 (819)
.+|.|-|..+..........+ -+.-.+|..+.||.-+ ..+++|+|+++.+.++...-.. .|.--.| +.+.|+
T Consensus 45 ~~VvIidl~n~~~~~Rrpi~A-----dsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~ 117 (327)
T d1utca2 45 AQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVA 117 (327)
T ss_dssp EEEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEESSSSEEE
T ss_pred ceEEEEECCCCCcceecccch-----hhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCC-CcEEEEecCCCEEE
Confidence 468888887654322222222 2456789888888876 4589999999999998887544 5666677 777666
Q ss_pred eccCCCeEEEEECCCCCccceEEEeccc----CCeEEEEECCCCCEEEEEE---C----CCeEEEEECCCCceeEEEecC
Q psy10114 612 SGSRDRMILQRDVRTPNSQSERRLVGHR----QEVCGLKWSPDNQYLASGG---N----DNRLYVWNLHSMSPLQTYTEH 680 (819)
Q Consensus 612 SGS~DGtI~IWDi~t~~~~~v~~l~gH~----~~VtsLafSpdg~~LaSGS---~----DGtI~IWDl~t~~~i~t~~~h 680 (819)
-.+ +..|+.|+++... .+.+.+..|. ..|..-..++++++++..| . .|.+.+|..+.+ .-+.+++|
T Consensus 118 lVT-~taVYHW~~~g~s-~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGh 194 (327)
T d1utca2 118 LVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 194 (327)
T ss_dssp EEC-SSEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCS
T ss_pred EEc-CCceEEEcccCCC-CchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccce
Confidence 554 3579999996644 4556666554 4688888899999876543 2 356788987654 45677788
Q ss_pred CCCEEEEEEcCCC--CeEEEEEc-cCCCCeEEEEECCCCc----e--eEEEc-------CCCCeEEEEEccCCCEEEEEE
Q psy10114 681 LAAVKAIAWSPHH--HGLLASGG-GTADRCIRFWNTLTGQ----P--MQCVD-------TGSQVCNLAWSKHSSELVSTH 744 (819)
Q Consensus 681 ~~~VtsLafSPdg--~~LLaSGg-Gs~DgtIrIWDl~tg~----~--v~~l~-------~~s~V~sLafSpdg~~Lasts 744 (819)
.+.-..+....+. ..+++-+. +...+++++.++.... . .+..+ .++-..++..|+....++..
T Consensus 195 aa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyvi- 273 (327)
T d1utca2 195 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI- 273 (327)
T ss_dssp EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEE-
T ss_pred eeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEE-
Confidence 6655555443221 22333321 2345789999886521 1 11111 13346678888888888874
Q ss_pred ecCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEE
Q psy10114 745 GYSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRF 795 (819)
Q Consensus 745 GssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrI 795 (819)
..-|.+.++|+.++..+..-+-..+.|...+-+.+..=++....+|.|.-
T Consensus 274 -TK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~ 323 (327)
T d1utca2 274 -TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 323 (327)
T ss_dssp -ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred -ecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEEE
Confidence 47899999999999999888777777776665655555666667787653
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.69 E-value=0.0062 Score=61.97 Aligned_cols=183 Identities=9% Similarity=-0.005 Sum_probs=121.2
Q ss_pred eccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEec----CCCCEEEE
Q psy10114 612 SGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTE----HLAAVKAI 687 (819)
Q Consensus 612 SGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~----h~~~VtsL 687 (819)
+--..+.|..||..+++. ........+.++++.++|+++++ +.+ .+..+|..+++....... ....+..+
T Consensus 35 vDi~~~~I~r~d~~~g~~----~~~~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~ 108 (295)
T d2ghsa1 35 FNILERELHELHLASGRK----TVHALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDG 108 (295)
T ss_dssp EEGGGTEEEEEETTTTEE----EEEECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEE
T ss_pred EECCCCEEEEEECCCCeE----EEEECCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeeecCCCcccceee
Confidence 333457788888877542 12223456888999888876664 444 688999998875433321 12357889
Q ss_pred EEcCCCCeEEEEEcc-CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCC------Cc
Q psy10114 688 AWSPHHHGLLASGGG-TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPT------LT 760 (819)
Q Consensus 688 afSPdg~~LLaSGgG-s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s------~k 760 (819)
.+.|+|...+.+... ...+.-.+|.+..++.......-.....++|+++++.++.+ .+..+.|..+++.. ++
T Consensus 109 ~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~-dt~~~~I~~~~~d~~~~~~~~~ 187 (295)
T d2ghsa1 109 RMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFV-DTKVNRLMRVPLDARTGLPTGK 187 (295)
T ss_dssp EECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEE-ETTTCEEEEEEBCTTTCCBSSC
T ss_pred EECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEe-ecccceeeEeeecccccccccc
Confidence 999999866655321 11234456666667655554444556889999999988775 45678899988742 11
Q ss_pred EE--EEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 761 QV--AKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 761 ~l--~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
.. ....+..+....+++..+|++.++.-..+.|..||-..+
T Consensus 188 ~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G~ 230 (295)
T d2ghsa1 188 AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 230 (295)
T ss_dssp CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred eEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCCCc
Confidence 11 222344556889999999998887777888999996543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.61 E-value=0.014 Score=62.86 Aligned_cols=220 Identities=11% Similarity=0.056 Sum_probs=135.4
Q ss_pred EEEEcC---CCCEEEEEe-cCceEEEeecCCceEEEEEec-CCCCeEEEEe--C--CceeeeccCC--------------
Q psy10114 560 SVAWNE---RGNLVAVGT-HHGYVQVWDVSVAKQVHKLVG-HTARVGALAW--N--GDMLSSGSRD-------------- 616 (819)
Q Consensus 560 sLafSp---dG~~LAsGs-~DGtI~IWDl~tgk~i~tl~g-Hs~~V~sLaw--n--g~~LaSGS~D-------------- 616 (819)
.+++.. ||+++++.. .++.|.+.|+++.++.+.... ....+..++. . -.+++.++.+
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~ 168 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 168 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence 445543 788888876 578999999999988765543 3344555554 2 3355554442
Q ss_pred ----CeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC--------------------------------
Q psy10114 617 ----RMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-------------------------------- 660 (819)
Q Consensus 617 ----GtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-------------------------------- 660 (819)
+.+.+.|..+.+....... .+....+.+++||+++++.+.+
T Consensus 169 ~~y~~~~t~ID~~tm~V~~QV~V---~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~ 245 (459)
T d1fwxa2 169 ANYVNVFTAVDADKWEVAWQVLV---SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 245 (459)
T ss_dssp G-EEEEEEEEETTTTEEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred hhcceEEEEEecCCceEEEEeee---CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhc
Confidence 2356778776553222222 2356678999999998887643
Q ss_pred ------CeEEEEECCC--C-ceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCc------------ee
Q psy10114 661 ------NRLYVWNLHS--M-SPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQ------------PM 719 (819)
Q Consensus 661 ------GtI~IWDl~t--~-~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~------------~v 719 (819)
+.+.+-|.+. + ..+..+.. ......+..+|||++++++|. .+.++.++|+++-. .+
T Consensus 246 Gk~~eingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGK--Ls~tVSViD~~Ki~~~~~~~~~~~~~~~ 322 (459)
T d1fwxa2 246 GDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFDAVFYENADPRSAVV 322 (459)
T ss_dssp TCSEEETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECT--TSSBEEEEEGGGHHHHHHSCC-GGGGEE
T ss_pred CCcEEeCCceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCC--cCCcEEEEEehhhhhhhcccCCccccEE
Confidence 1123333332 1 11112221 122346789999999999876 89999999986311 12
Q ss_pred EEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCC----------cEEEEEecCCCCEEEEE------EecCCCE
Q psy10114 720 QCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTL----------TQVAKLTGHSYRVLYLA------MSPDGEA 783 (819)
Q Consensus 720 ~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~----------k~l~sl~gH~~~VtsLa------fSpDG~~ 783 (819)
...+.+-.....+|+..|. .+ ++-.-|.+|.-|++... ..+..+.-|-. +-.+. ..|||++
T Consensus 323 ~e~elglgPLht~fd~~g~-ay-tslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~-~gh~~~~~g~t~~~dgk~ 399 (459)
T d1fwxa2 323 AEPELGLGPLHTAFDGRGN-AY-TSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ-PGHLKTVMGETLDATNDW 399 (459)
T ss_dssp ECCBCCSCEEEEEECTTSE-EE-EEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC-EEEEEETTTTSTTCCSSE
T ss_pred eecccCcCccccccCCCce-EE-EEeeccceEEEEecchhhhhhccccCCcceeccccccC-CCCCccCcCCcCCCCCCE
Confidence 2234455667778887774 33 33788999999998422 34455554432 33332 3678999
Q ss_pred EEEEe
Q psy10114 784 IVTGA 788 (819)
Q Consensus 784 LaSGS 788 (819)
|++..
T Consensus 400 l~~~n 404 (459)
T d1fwxa2 400 LVCLS 404 (459)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99876
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=0.05 Score=54.26 Aligned_cols=237 Identities=11% Similarity=0.007 Sum_probs=148.2
Q ss_pred EECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEe-cCceEEEeecCCce----EEEEEecCCCCeEEE
Q psy10114 529 VGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGT-HHGYVQVWDVSVAK----QVHKLVGHTARVGAL 603 (819)
Q Consensus 529 ~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs-~DGtI~IWDl~tgk----~i~tl~gHs~~V~sL 603 (819)
.+....|+-.++.+.+...+. .....+.+++|+..++.|.-.. .++.|.--++.... ...........+.++
T Consensus 6 ~s~~~~I~~~~l~~~~~~~~~---~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~gl 82 (266)
T d1ijqa1 6 FTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (266)
T ss_dssp EECBSSEEEEETTSCCCEEEE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EECCCeEEEEECCCCcceeee---CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceE
Confidence 344566888888877765542 2345788999998888777664 45667666654321 122222333445556
Q ss_pred Ee---CCceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEE--CCCeEEEEECCCCceeEEEe
Q psy10114 604 AW---NGDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGG--NDNRLYVWNLHSMSPLQTYT 678 (819)
Q Consensus 604 aw---ng~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS--~DGtI~IWDl~t~~~i~t~~ 678 (819)
++ +++...+-...+.|.+.++..... ............+++.+|...++.... ..+.|.-.++..........
T Consensus 83 AvD~~~~~lY~~d~~~~~I~v~~~~g~~~--~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~ 160 (266)
T d1ijqa1 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 160 (266)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred EEeeccceEEEEecCCCEEEeEecCCceE--EEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccc
Confidence 65 355556666778999999887542 233444556789999998666665443 34567777775554444344
Q ss_pred cCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC---CCeEEEEEccCCCEEEEEEecCCCeEEEEE
Q psy10114 679 EHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG---SQVCNLAWSKHSSELVSTHGYSQNQILVWK 755 (819)
Q Consensus 679 ~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~---s~V~sLafSpdg~~LastsGssDg~I~IWD 755 (819)
..-....++++++.++.++.+.. ..+.|...|+............ ....++++. +..++.+ ...++.|...+
T Consensus 161 ~~~~~p~gl~iD~~~~~lYw~d~--~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~t-d~~~~~I~~~~ 235 (266)
T d1ijqa1 161 ENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWT-DIINEAIFSAN 235 (266)
T ss_dssp SSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEE-ETTTTEEEEEE
T ss_pred cccceeeEEEeeccccEEEEecC--CcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEE-ECCCCeEEEEE
Confidence 44466789999999988888865 6789999998765443333222 335566665 4566654 34667888888
Q ss_pred CCCCcEEEEEecCCCCEEEE
Q psy10114 756 YPTLTQVAKLTGHSYRVLYL 775 (819)
Q Consensus 756 l~s~k~l~sl~gH~~~VtsL 775 (819)
..+++....+......+.++
T Consensus 236 ~~~g~~~~~~~~~~~~p~~i 255 (266)
T d1ijqa1 236 RLTGSDVNLLAENLLSPEDM 255 (266)
T ss_dssp TTTCCCCEEEECSCSCCCCE
T ss_pred CCCCcceEEEEcCCCCceEE
Confidence 77777666665544433333
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.52 E-value=0.0085 Score=66.96 Aligned_cols=266 Identities=13% Similarity=0.074 Sum_probs=151.2
Q ss_pred ecCCeEEEEECCCeEEEEEcCCCceEEEEeccCC--CCCeEEEEEcCCCCEEEEEec------CceEEEeecCCceEEEE
Q psy10114 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSAD--GNSVTSVAWNERGNLVAVGTH------HGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 521 wS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h--~~~VtsLafSpdG~~LAsGs~------DGtI~IWDl~tgk~i~t 592 (819)
..++.++.++.++.+.--|.++|+..-...+... ...+++--.-. +..++++.. +|.|.-+|+.+|+.+.+
T Consensus 113 ~~~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~ 191 (571)
T d2ad6a1 113 YGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred eeCCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEe-CCeEEEeeccccccccCcEEEEECCCCcEEEE
Confidence 3467888889999999999999987554333211 11122111111 245555553 68899999999999987
Q ss_pred EecCC-------------------------------------CCeE---EEEeCCceeeeccC----------------C
Q psy10114 593 LVGHT-------------------------------------ARVG---ALAWNGDMLSSGSR----------------D 616 (819)
Q Consensus 593 l~gHs-------------------------------------~~V~---sLawng~~LaSGS~----------------D 616 (819)
+.... +.+. ++....+.+..+.. .
T Consensus 192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s 271 (571)
T d2ad6a1 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccc
Confidence 65321 1111 12112222221111 3
Q ss_pred CeEEEEECCCCCccceEEEeccc-------CCeEEEEECCCCC---EEEEEECCCeEEEEECCCCceeEEEecCC-----
Q psy10114 617 RMILQRDVRTPNSQSERRLVGHR-------QEVCGLKWSPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYTEHL----- 681 (819)
Q Consensus 617 GtI~IWDi~t~~~~~v~~l~gH~-------~~VtsLafSpdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~~h~----- 681 (819)
..+...|.++++.........|. ..........+++ .++.++.+|.+++.|.++++++...+...
T Consensus 272 ~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~ 351 (571)
T d2ad6a1 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred cceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccc
Confidence 46777888887743322222221 1111122222443 46778899999999999998775432110
Q ss_pred --------CCE--------------------------EEEEEcCCCCeEEEEEc--------------------------
Q psy10114 682 --------AAV--------------------------KAIAWSPHHHGLLASGG-------------------------- 701 (819)
Q Consensus 682 --------~~V--------------------------tsLafSPdg~~LLaSGg-------------------------- 701 (819)
.++ ...+++|+...+++...
T Consensus 352 ~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (571)
T d2ad6a1 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceee
Confidence 000 12456666554443221
Q ss_pred --------cCCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCC-CE
Q psy10114 702 --------GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSY-RV 772 (819)
Q Consensus 702 --------Gs~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~-~V 772 (819)
....|.+.-+|+.+|+.+..........+-..+-.+..+++ |..|+.++.+|.++|+.+.++.-... .-
T Consensus 432 ~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~--G~~dg~l~A~Da~tGe~lW~~~l~~~~~a 509 (571)
T d2ad6a1 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWY--ATLDGYLKALDNKDGKELWNFKMPSGGIG 509 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred ccccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEE--ECCCCeEEEEECCCCcEEEEEECCCCcee
Confidence 00125788899999998877765443322223335666666 88999999999999999988863221 11
Q ss_pred EEEEEecCCC-EEEEEeC
Q psy10114 773 LYLAMSPDGE-AIVTGAG 789 (819)
Q Consensus 773 tsLafSpDG~-~LaSGS~ 789 (819)
.-+.|..||+ ||++.+.
T Consensus 510 ~P~ty~~dGkqYi~v~~g 527 (571)
T d2ad6a1 510 SPMTYSFKGKQYIGSMYG 527 (571)
T ss_dssp CCEEEEETTEEEEEEEEC
T ss_pred cceEEEECCEEEEEEEec
Confidence 2244555775 5655443
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.42 E-value=0.01 Score=60.95 Aligned_cols=269 Identities=11% Similarity=0.040 Sum_probs=139.1
Q ss_pred EEecCCeEEEEECC-----C------eEEEEEcCCCceEEEEecc-CCCCCeEEEEEcCCCCEEEEEecC-ceEEEeecC
Q psy10114 519 VDWSSQNVLSVGLG-----S------CVYLWSACTSQVTRLCDLS-ADGNSVTSVAWNERGNLVAVGTHH-GYVQVWDVS 585 (819)
Q Consensus 519 ldwS~~~LLa~g~D-----g------~V~LWd~~tg~~~~l~~l~-~h~~~VtsLafSpdG~~LAsGs~D-GtI~IWDl~ 585 (819)
+..+++.++.+|.+ + .+.+||..+++........ .+.....+.++.++|++++.|+.+ ..+.+||..
T Consensus 27 ~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~ 106 (387)
T d1k3ia3 27 EPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSS 106 (387)
T ss_dssp ETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGG
T ss_pred EeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCc
Confidence 33455566666642 1 3789999988765433222 233334566888999999998765 589999998
Q ss_pred CceEEEEEec--CCCCeEEEEe-CCceeeeccCC------CeEEEEECCCCCccceEEE-------eccc-----CCeEE
Q psy10114 586 VAKQVHKLVG--HTARVGALAW-NGDMLSSGSRD------RMILQRDVRTPNSQSERRL-------VGHR-----QEVCG 644 (819)
Q Consensus 586 tgk~i~tl~g--Hs~~V~sLaw-ng~~LaSGS~D------GtI~IWDi~t~~~~~v~~l-------~gH~-----~~Vts 644 (819)
+.+-...-.. ....-.+... ++..++.|+.+ ..+.+||..+.+....... ..+. ..-..
T Consensus 107 ~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (387)
T d1k3ia3 107 SDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAW 186 (387)
T ss_dssp GTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCC
T ss_pred cCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeE
Confidence 8765432221 1122233333 78888887753 3688999887643211100 0000 00111
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCCceeEEEe--c----C--CCCEEEEEEcCCCCeEEEEEccCC------CCeEEE
Q psy10114 645 LKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYT--E----H--LAAVKAIAWSPHHHGLLASGGGTA------DRCIRF 710 (819)
Q Consensus 645 LafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~--~----h--~~~VtsLafSPdg~~LLaSGgGs~------DgtIrI 710 (819)
+...++|+.+..++.++.+.++|..+......-. . + ...-.++.+......+++.||+.. .....+
T Consensus 187 ~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~ 266 (387)
T d1k3ia3 187 LFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 266 (387)
T ss_dssp EEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred EEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeec
Confidence 2234567777777777778888877654322211 0 0 011123333333344556654211 123333
Q ss_pred EECCCC---ceeEEE----cCCCCeEEEEEccCCCEEEEEEecCC-----------CeEEEEECCCCcEEEEEecCCCCE
Q psy10114 711 WNTLTG---QPMQCV----DTGSQVCNLAWSKHSSELVSTHGYSQ-----------NQILVWKYPTLTQVAKLTGHSYRV 772 (819)
Q Consensus 711 WDl~tg---~~v~~l----~~~s~V~sLafSpdg~~LastsGssD-----------g~I~IWDl~s~k~l~sl~gH~~~V 772 (819)
.+.... ...... .....-.+.+..+||+.+++ |+.+ ..+.+||..+.+-...-.....+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~--GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~~~R~ 344 (387)
T d1k3ia3 267 ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRV 344 (387)
T ss_dssp EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCC
T ss_pred ccccccccCCCceeeccccccccccceeeeccCCeEEEE--CCcccCccCCCCcEeceEEEEECCCCeEEECCCCCCccc
Confidence 433321 111111 11222335566688887666 4421 247889976654321111111111
Q ss_pred --EEEEEecCCCEEEEEeC
Q psy10114 773 --LYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 773 --tsLafSpDG~~LaSGS~ 789 (819)
....+.+||+.++.|+.
T Consensus 345 ~Hs~a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 345 YHSISLLLPDGRVFNGGGG 363 (387)
T ss_dssp TTEEEEECTTSCEEEEECC
T ss_pred ceEEEEECCCCEEEEEeCC
Confidence 22345789999999884
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.41 E-value=0.015 Score=64.77 Aligned_cols=238 Identities=10% Similarity=-0.009 Sum_probs=141.5
Q ss_pred CCEEEEEecCceEEEeecCCceEEEEEecCC----CCeE--EEEeCCceeeecc-----CCCeEEEEECCCCCccceEEE
Q psy10114 567 GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT----ARVG--ALAWNGDMLSSGS-----RDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 567 G~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs----~~V~--sLawng~~LaSGS-----~DGtI~IWDi~t~~~~~v~~l 635 (819)
+..++.++.||.+.-.|.++|+.+....... ..++ -+.+++..++.++ .+|.|.-+|.++++.......
T Consensus 115 ~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t 194 (571)
T d2ad6a1 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEec
Confidence 4578889999999999999999887764211 1111 1222333333222 368899999999874332211
Q ss_pred ec-----------------------------------ccCCe-EEEEECCCCCEEEEEEC----------------CCeE
Q psy10114 636 VG-----------------------------------HRQEV-CGLKWSPDNQYLASGGN----------------DNRL 663 (819)
Q Consensus 636 ~g-----------------------------------H~~~V-tsLafSpdg~~LaSGS~----------------DGtI 663 (819)
.. ....+ ...++.++...+..+.. .+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~sv 274 (571)
T d2ad6a1 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred cCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccce
Confidence 10 00111 23455666666665544 3467
Q ss_pred EEEECCCCceeEEEecCCC---------CEEEEEEcCCCCe--EEEEEccCCCCeEEEEECCCCceeEEEcCC-------
Q psy10114 664 YVWNLHSMSPLQTYTEHLA---------AVKAIAWSPHHHG--LLASGGGTADRCIRFWNTLTGQPMQCVDTG------- 725 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~---------~VtsLafSPdg~~--LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~------- 725 (819)
...|.++++.+..++.... .........+++. .++.. +.+|.+.+.|..+|+.+...+..
T Consensus 275 vAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~--~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~ 352 (571)
T d2ad6a1 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHI--DRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEE--CTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred eeeeccchhheecccccCccccccccccccceeeeeccCccccceeec--cccceEEEEecCCCcEeeeeccCCcccccc
Confidence 8889999999888774322 1111222233432 34444 38999999999999877432110
Q ss_pred ---------------------------------CCeEEEEEccCCCEEEEEEec--------------------------
Q psy10114 726 ---------------------------------SQVCNLAWSKHSSELVSTHGY-------------------------- 746 (819)
Q Consensus 726 ---------------------------------s~V~sLafSpdg~~LastsGs-------------------------- 746 (819)
..-...+++|+...+++....
T Consensus 353 ~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (571)
T d2ad6a1 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeec
Confidence 000125667776666542210
Q ss_pred ---------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 747 ---------SQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 747 ---------sDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
..|.|.-+|..+++.+.+...-. +..+-.++-.|..+++|+.||.++-+|.++++..-+.
T Consensus 433 ~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~-~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~ 501 (571)
T d2ad6a1 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccCCcccCCcccEEEeccCCCceeeEcCCCC-CCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 12468888888998887665221 1111122334668888999999999999999876543
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=97.31 E-value=0.057 Score=59.93 Aligned_cols=276 Identities=11% Similarity=0.093 Sum_probs=155.5
Q ss_pred cCCeEEEEECCCeEEEEEcCCCceEEEEeccCCC-CCeEEEEEcC--CCCEEEEEec------CceEEEeecCCceEEEE
Q psy10114 522 SSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG-NSVTSVAWNE--RGNLVAVGTH------HGYVQVWDVSVAKQVHK 592 (819)
Q Consensus 522 S~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~-~~VtsLafSp--dG~~LAsGs~------DGtI~IWDl~tgk~i~t 592 (819)
..+.++.++.++.++-.|..+|+..-......+. ..+. +.-.| -+..+++|+. .|.|.-+|.++|+.+.+
T Consensus 127 ~~~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~ 205 (573)
T d1kb0a2 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (573)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCcEEEEecccceeeeccccccceecccCccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceee
Confidence 3567778888999999999999876433332221 1111 11011 1345556543 47899999999999987
Q ss_pred EecCC-------------------------------CCeE-EEEeCC--ceeeecc-------------------CCCeE
Q psy10114 593 LVGHT-------------------------------ARVG-ALAWNG--DMLSSGS-------------------RDRMI 619 (819)
Q Consensus 593 l~gHs-------------------------------~~V~-sLawng--~~LaSGS-------------------~DGtI 619 (819)
+.... +.+. ..+.+. ..+..+. ....|
T Consensus 206 ~~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~sv 285 (573)
T d1kb0a2 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (573)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eeeccccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceE
Confidence 74211 1111 122221 1111110 12345
Q ss_pred EEEECCCCCccceEEEeccc-------CCeEEEEECCCC---CEEEEEECCCeEEEEECCCCceeEEEecCCCC------
Q psy10114 620 LQRDVRTPNSQSERRLVGHR-------QEVCGLKWSPDN---QYLASGGNDNRLYVWNLHSMSPLQTYTEHLAA------ 683 (819)
Q Consensus 620 ~IWDi~t~~~~~v~~l~gH~-------~~VtsLafSpdg---~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~------ 683 (819)
...|.++++.........|. ..........++ ..++.++.+|.+.++|..+++.+.........
T Consensus 286 vAld~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~ 365 (573)
T d1kb0a2 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (573)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccc
Confidence 56666666533222221221 111111222233 35777888999999999999987654321100
Q ss_pred -----------------------------EEEEEEcCCCCeEEEEEcc--------------------------------
Q psy10114 684 -----------------------------VKAIAWSPHHHGLLASGGG-------------------------------- 702 (819)
Q Consensus 684 -----------------------------VtsLafSPdg~~LLaSGgG-------------------------------- 702 (819)
-...+++|+...+++....
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 445 (573)
T d1kb0a2 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (573)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred cccceeeeeeccccccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccc
Confidence 0123566666555443210
Q ss_pred --------CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC----CC
Q psy10114 703 --------TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH----SY 770 (819)
Q Consensus 703 --------s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH----~~ 770 (819)
..-|.+.-||+.+|+.+.......+...=..+-.+..+++ |..|+.++.+|..+|+.+.++.-. ..
T Consensus 446 ~~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~--G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~ 523 (573)
T d1kb0a2 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ--GTADGRLVAYHAATGEKLWEAPTGTGVVAA 523 (573)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred cccCCCCCCCcccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEE--ECCCCeEEEEECCCCcEeEEEECCCCcccc
Confidence 0014688899999998888765544333233446777777 889999999999999999988732 23
Q ss_pred CEEEEEEecCCC-EEEEEeC----------------CCcEEEEECCCCce
Q psy10114 771 RVLYLAMSPDGE-AIVTGAG----------------DETLRFWNVFSKVR 803 (819)
Q Consensus 771 ~VtsLafSpDG~-~LaSGS~----------------DGtIrIWdl~s~~~ 803 (819)
+ +.|..||+ ||+..+. .+.|.+|.+..+.+
T Consensus 524 P---~ty~~~GkQYv~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~g~~~ 570 (573)
T d1kb0a2 524 P---STYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKAR 570 (573)
T ss_dssp C---EEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBCC
T ss_pred C---EEEEECCEEEEEEEeCCCcccccccccccCCCCCEEEEEEeCCcCC
Confidence 3 44455776 4544333 23577777765543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=97.21 E-value=0.014 Score=64.87 Aligned_cols=278 Identities=12% Similarity=0.080 Sum_probs=164.5
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCC--------CCe-EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG--------NSV-TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~--------~~V-tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
++.+..++.++.|+-.|..+|+..=.++..... ..+ ..++. .+..++.++.||.+.-.|..+|+.+...
T Consensus 66 ~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~g~l~Alda~tG~~~w~~ 143 (560)
T d1kv9a2 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (560)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcce--eCCeEEEEeCCCEEEEEECCCCcEEecc
Confidence 456777788888888899998765322211000 000 11111 1457889999999999999999998877
Q ss_pred ecCCC--C--e--EEEEeCCceeeecc------CCCeEEEEECCCCCccceEEEec------------------------
Q psy10114 594 VGHTA--R--V--GALAWNGDMLSSGS------RDRMILQRDVRTPNSQSERRLVG------------------------ 637 (819)
Q Consensus 594 ~gHs~--~--V--~sLawng~~LaSGS------~DGtI~IWDi~t~~~~~v~~l~g------------------------ 637 (819)
..... . + .-+.+++ .++.++ ..|.|.-+|.++++.........
T Consensus 144 ~~~~~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (560)
T d1kv9a2 144 QTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (560)
T ss_dssp ECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred CccCcccceeeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeeeeccccccCCcccccccccccccccccc
Confidence 63221 1 1 1122233 333332 34779999999887432221110
Q ss_pred ----ccCC-eEEEEECCCCCEEEEEEC-------------------CCeEEEEECCCCceeEEEecCCCC----------
Q psy10114 638 ----HRQE-VCGLKWSPDNQYLASGGN-------------------DNRLYVWNLHSMSPLQTYTEHLAA---------- 683 (819)
Q Consensus 638 ----H~~~-VtsLafSpdg~~LaSGS~-------------------DGtI~IWDl~t~~~i~t~~~h~~~---------- 683 (819)
.... -..+++.++...+..+.. .+.|.-.|.++++....++.....
T Consensus 223 ~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~ 302 (560)
T d1kv9a2 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI 302 (560)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred ccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEecccccccccccccee
Confidence 0011 122455666666654331 235777899999988777643221
Q ss_pred -EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCCC------------------------------------
Q psy10114 684 -VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGS------------------------------------ 726 (819)
Q Consensus 684 -VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s------------------------------------ 726 (819)
...+........+++.+ +.+|.+.++|..+|+.+.......
T Consensus 303 ~l~~~~~~g~~~~~v~~~--~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg 380 (560)
T d1kv9a2 303 TLAELNIDGKPRKVLMQA--PKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (560)
T ss_dssp EEEEEEETTEEEEEEEEC--CTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred eeeeeecCCceeeeeeec--CccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeeccccc
Confidence 12222222222344443 489999999999999876542211
Q ss_pred -CeEEEEEccCCCEEEEEEec----------------------------------CCCeEEEEECCCCcEEEEEecCCCC
Q psy10114 727 -QVCNLAWSKHSSELVSTHGY----------------------------------SQNQILVWKYPTLTQVAKLTGHSYR 771 (819)
Q Consensus 727 -~V~sLafSpdg~~LastsGs----------------------------------sDg~I~IWDl~s~k~l~sl~gH~~~ 771 (819)
.-...+++|+...+++.... ..|.+.-+|..+++.+.+.... ..
T Consensus 381 ~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~-~~ 459 (560)
T d1kv9a2 381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-TH 459 (560)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SS
T ss_pred cccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCC-CC
Confidence 01245667777766653210 1257888999999998876532 22
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 772 VLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 772 VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
..+-.++-.|.++++|+.||.++-+|..+++..-+
T Consensus 460 ~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~ 494 (560)
T d1kv9a2 460 WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ 494 (560)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCceeEECCCEEEEECCCCcEEEEECCCCcEeEE
Confidence 22223344567888999999999999999997654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=97.21 E-value=0.066 Score=59.25 Aligned_cols=264 Identities=13% Similarity=0.108 Sum_probs=151.7
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEcC--CCCEEEEEec------CceEEEeecCCceEEEEEe
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWNE--RGNLVAVGTH------HGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSp--dG~~LAsGs~------DGtI~IWDl~tgk~i~tl~ 594 (819)
++.++.+..++.|.-.|..+|+..-........... .+.-.| .+..++++.. .|.|.-+|.++|+.+.++.
T Consensus 117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~-~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 195 (560)
T d1kv9a2 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPY-SITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (560)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSC-BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccce-eeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeee
Confidence 567888889999999999999876544432221111 111111 1234555432 3779999999999998875
Q ss_pred cC------------------------------CCCeE-EEEeC--Cceeeecc-------------------CCCeEEEE
Q psy10114 595 GH------------------------------TARVG-ALAWN--GDMLSSGS-------------------RDRMILQR 622 (819)
Q Consensus 595 gH------------------------------s~~V~-sLawn--g~~LaSGS-------------------~DGtI~IW 622 (819)
.- ...+. .++.+ .+.+..+. ....|...
T Consensus 196 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAl 275 (560)
T d1kv9a2 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (560)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred eccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEe
Confidence 21 01111 01121 12221110 02456777
Q ss_pred ECCCCCccceEEEecccC-------CeEEEEECCCC---CEEEEEECCCeEEEEECCCCceeEEEecCCC----------
Q psy10114 623 DVRTPNSQSERRLVGHRQ-------EVCGLKWSPDN---QYLASGGNDNRLYVWNLHSMSPLQTYTEHLA---------- 682 (819)
Q Consensus 623 Di~t~~~~~v~~l~gH~~-------~VtsLafSpdg---~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~---------- 682 (819)
|+++++.........|.. ...-.....++ ..++.++.+|.+.++|..+++++........
T Consensus 276 d~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~ 355 (560)
T d1kv9a2 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (560)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhh
Confidence 888876443333222221 11111122233 3567788899999999999998755431100
Q ss_pred --------------C------------EEEEEEcCCCCeEEEEEc---------------------------------cC
Q psy10114 683 --------------A------------VKAIAWSPHHHGLLASGG---------------------------------GT 703 (819)
Q Consensus 683 --------------~------------VtsLafSPdg~~LLaSGg---------------------------------Gs 703 (819)
. -...+++|+...+++... +.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 435 (560)
T d1kv9a2 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (560)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred ccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcc
Confidence 0 013456676665554331 01
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC-EEEEEEecCCC
Q psy10114 704 ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR-VLYLAMSPDGE 782 (819)
Q Consensus 704 ~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~-VtsLafSpDG~ 782 (819)
..|.+.-+|+.+|+.+.....+....+-.++-.+..+++ |..||.++.+|..+|+.+.++.-.... -.-+.+..||+
T Consensus 436 ~~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~--G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGk 513 (560)
T d1kv9a2 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQ--GTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513 (560)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEE--ECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 136788999999999888766554443334456667776 889999999999999999988743211 11244556785
Q ss_pred -EEEEEeC
Q psy10114 783 -AIVTGAG 789 (819)
Q Consensus 783 -~LaSGS~ 789 (819)
+|++.+.
T Consensus 514 qyv~v~aG 521 (560)
T d1kv9a2 514 QYVAIMAG 521 (560)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 5655443
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.19 E-value=0.066 Score=59.85 Aligned_cols=238 Identities=12% Similarity=0.043 Sum_probs=142.6
Q ss_pred CCEEEEEecCceEEEeecCCceEEEEEecCC----CCeE-EEEeCCceeeecc------CCCeEEEEECCCCCccceEEE
Q psy10114 567 GNLVAVGTHHGYVQVWDVSVAKQVHKLVGHT----ARVG-ALAWNGDMLSSGS------RDRMILQRDVRTPNSQSERRL 635 (819)
Q Consensus 567 G~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs----~~V~-sLawng~~LaSGS------~DGtI~IWDi~t~~~~~v~~l 635 (819)
+..++.++.||.|.-.|.++|+.+..+.... ..++ .-...++.++.|+ ..|.|+-+|.++++..-....
T Consensus 121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t 200 (596)
T d1w6sa_ 121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (596)
T ss_dssp CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeec
Confidence 3578899999999999999999998875321 1111 1112344455554 358999999999874322111
Q ss_pred ec------------------------------------ccCCeEEEEECCCCCEEEEEEC----------------CCeE
Q psy10114 636 VG------------------------------------HRQEVCGLKWSPDNQYLASGGN----------------DNRL 663 (819)
Q Consensus 636 ~g------------------------------------H~~~VtsLafSpdg~~LaSGS~----------------DGtI 663 (819)
.. ....-..+++.+....+..+.. .+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~si 280 (596)
T d1w6sa_ 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (596)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred cCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccc
Confidence 00 0001123455666666655543 2457
Q ss_pred EEEECCCCceeEEEecCCC---------CEEEEE-EcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCCC-----
Q psy10114 664 YVWNLHSMSPLQTYTEHLA---------AVKAIA-WSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTGS----- 726 (819)
Q Consensus 664 ~IWDl~t~~~i~t~~~h~~---------~VtsLa-fSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~s----- 726 (819)
.-.|+++++.+..++.... ...-+. -..+|+ .+++.. +.+|.+.++|..+|+.+...+...
T Consensus 281 vAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~--~k~G~~~vlDr~tG~~i~~~~~~~~~~~~ 358 (596)
T d1w6sa_ 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHP--DRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (596)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEE--CTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred cccccccccccccccceeccccCCccccceeeeeccccccccccceecc--ccccceeeecCCCCceeeecccccccccc
Confidence 8889999998887764211 111122 123443 234444 388999999999998775432110
Q ss_pred ---------C--------------------------eEEEEEccCCCEEEEEEe--------------------------
Q psy10114 727 ---------Q--------------------------VCNLAWSKHSSELVSTHG-------------------------- 745 (819)
Q Consensus 727 ---------~--------------------------V~sLafSpdg~~LastsG-------------------------- 745 (819)
+ -...+++|+...+++...
T Consensus 359 ~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (596)
T d1w6sa_ 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (596)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEeccccccccccccccccccccccccccccc
Confidence 0 012355666555544210
Q ss_pred -----------cCCCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 746 -----------YSQNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 746 -----------ssDg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
...|.+.-||..+++.+.+... ..+..+-.++..|..++.|+.||.++.+|..+++..-+.
T Consensus 439 ~~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~ 510 (596)
T d1w6sa_ 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (596)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccCcccCcccCCCcceEEEEeCCCCceecccCC-CCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEE
Confidence 0025688889889988776542 222222233446778888999999999999999987543
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.18 E-value=0.16 Score=53.66 Aligned_cols=244 Identities=12% Similarity=0.063 Sum_probs=135.8
Q ss_pred eEEEEEcCCCCEEEEEec-----CceEEEeecCCceEEEEEecCCCCeEEEEe--CCceeeec----------------c
Q psy10114 558 VTSVAWNERGNLVAVGTH-----HGYVQVWDVSVAKQVHKLVGHTARVGALAW--NGDMLSSG----------------S 614 (819)
Q Consensus 558 VtsLafSpdG~~LAsGs~-----DGtI~IWDl~tgk~i~tl~gHs~~V~sLaw--ng~~LaSG----------------S 614 (819)
+...++||+|+++|.+-. ...+++.|+++++.+...-. ......++| +++.|+-. .
T Consensus 127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~ 205 (430)
T d1qfma1 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (430)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred ecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEEeccccCcccccccccC
Confidence 345678999999886532 34799999999987653221 112246778 34444322 1
Q ss_pred CCCeEEEEECCCCCccceEEEeccc--CCeEEEEECCCCCEEEEEEC---CCe--EEEEECCCCc--------eeEEEec
Q psy10114 615 RDRMILQRDVRTPNSQSERRLVGHR--QEVCGLKWSPDNQYLASGGN---DNR--LYVWNLHSMS--------PLQTYTE 679 (819)
Q Consensus 615 ~DGtI~IWDi~t~~~~~v~~l~gH~--~~VtsLafSpdg~~LaSGS~---DGt--I~IWDl~t~~--------~i~t~~~ 679 (819)
....|..+.+.++.......+.... ..+..+..+.++++++.... ++. +.+.|+.... .......
T Consensus 206 ~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 285 (430)
T d1qfma1 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (430)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecc
Confidence 2236888888776554444444332 34677888999998765432 223 4555554321 1222333
Q ss_pred CCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCce---eEEEc-CCCCeEEEEEccCCCEEEEEE-ecCCCeEEEE
Q psy10114 680 HLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQP---MQCVD-TGSQVCNLAWSKHSSELVSTH-GYSQNQILVW 754 (819)
Q Consensus 680 h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~---v~~l~-~~s~V~sLafSpdg~~Lasts-GssDg~I~IW 754 (819)
......-+. +.++..++.+.-+..++.|...++..... ...+. +...+..-.++..+++++... -...+.|.++
T Consensus 286 ~~~~~~~~~-~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~ 364 (430)
T d1qfma1 286 FEGEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH 364 (430)
T ss_dssp SSSCEEEEE-EETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred cccceEEEe-cCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEE
Confidence 333333332 23333344443333457777777775432 22233 334455445555566666531 2223468999
Q ss_pred ECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC----CCcEEEEECCCCce
Q psy10114 755 KYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG----DETLRFWNVFSKVR 803 (819)
Q Consensus 755 Dl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~----DGtIrIWdl~s~~~ 803 (819)
+..+++.........+.|..+...++...+...-. -.++.-+|+.+++.
T Consensus 365 ~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~ 417 (430)
T d1qfma1 365 DLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 417 (430)
T ss_dssp ETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred ECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence 99888776555444556666655555554433222 36889999988764
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=97.16 E-value=0.031 Score=62.15 Aligned_cols=278 Identities=11% Similarity=0.057 Sum_probs=161.1
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCC--------CCCe-EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEE
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSAD--------GNSV-TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKL 593 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h--------~~~V-tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl 593 (819)
++.+..++.++.|+-.|..+|+..=.++.... ...+ ..+... +..++.++.||.+.-.|.++|+.+...
T Consensus 77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~ 154 (573)
T d1kb0a2 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQ 154 (573)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceecc
Confidence 45666677788888899998876432221110 0111 122222 346778889999999999999998776
Q ss_pred ecCC---CCeE----EEEeCCceeeecc------CCCeEEEEECCCCCccceEEEec-----------------------
Q psy10114 594 VGHT---ARVG----ALAWNGDMLSSGS------RDRMILQRDVRTPNSQSERRLVG----------------------- 637 (819)
Q Consensus 594 ~gHs---~~V~----sLawng~~LaSGS------~DGtI~IWDi~t~~~~~v~~l~g----------------------- 637 (819)
.... ..+. .+.+ ++.+++|+ ..|.|..+|.++++.........
T Consensus 155 ~~~~~~~~~~~~~~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~ 233 (573)
T d1kb0a2 155 NTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (573)
T ss_dssp ETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCccCCcceEEeecceEEE-eccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCC
Confidence 5321 1111 1222 33344332 35789999999887432211100
Q ss_pred ------ccCCe-EEEEECCCCCEEEEEEC-------------------CCeEEEEECCCCceeEEEecCCC---------
Q psy10114 638 ------HRQEV-CGLKWSPDNQYLASGGN-------------------DNRLYVWNLHSMSPLQTYTEHLA--------- 682 (819)
Q Consensus 638 ------H~~~V-tsLafSpdg~~LaSGS~-------------------DGtI~IWDl~t~~~i~t~~~h~~--------- 682 (819)
....+ ...++.++...+..+.. ...|.-.|.++++....++....
T Consensus 234 ~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~ 313 (573)
T d1kb0a2 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (573)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccc
Confidence 00111 12455566555554331 12577788888888776654221
Q ss_pred CEEEEEEcCCCC--eEEEEEccCCCCeEEEEECCCCceeEEEcCC-----------------------------------
Q psy10114 683 AVKAIAWSPHHH--GLLASGGGTADRCIRFWNTLTGQPMQCVDTG----------------------------------- 725 (819)
Q Consensus 683 ~VtsLafSPdg~--~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~----------------------------------- 725 (819)
+........++. .+++.+ +.+|.+.++|..+|+.+......
T Consensus 314 ~~~l~~~~~~g~~~~~v~~~--~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~G 391 (573)
T d1kb0a2 314 PMILADIKIAGKPRKVILHA--PKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (573)
T ss_dssp CCEEEEEEETTEEEEEEEEC--CTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred eeeecceecCCCceeeeeec--cccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccC
Confidence 112222222332 233333 48999999999999987544210
Q ss_pred -CCeEEEEEccCCCEEEEEEec-----------------------------------------CCCeEEEEECCCCcEEE
Q psy10114 726 -SQVCNLAWSKHSSELVSTHGY-----------------------------------------SQNQILVWKYPTLTQVA 763 (819)
Q Consensus 726 -s~V~sLafSpdg~~LastsGs-----------------------------------------sDg~I~IWDl~s~k~l~ 763 (819)
..-..++++|+...+++.... .-|.+.-+|..+++.+.
T Consensus 392 g~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~W 471 (573)
T d1kb0a2 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (573)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred CccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceEe
Confidence 001124677776666653210 01468889999999988
Q ss_pred EEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceecc
Q psy10114 764 KLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQR 806 (819)
Q Consensus 764 sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k 806 (819)
+..... +..+=..+-.|..+++|+.||.++.+|..+++..-+
T Consensus 472 ~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~ 513 (573)
T d1kb0a2 472 SVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (573)
T ss_dssp EEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEE
Confidence 776432 222222344677888999999999999999998654
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.16 Score=50.43 Aligned_cols=231 Identities=13% Similarity=-0.003 Sum_probs=144.3
Q ss_pred EEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeC--Ccee-eeccCCCeEEEEECCCCCc--cceEEEecccCCeEE
Q psy10114 570 VAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWN--GDML-SSGSRDRMILQRDVRTPNS--QSERRLVGHRQEVCG 644 (819)
Q Consensus 570 LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawn--g~~L-aSGS~DGtI~IWDi~t~~~--~~v~~l~gH~~~Vts 644 (819)
|+.+.. ..|+-.++++.+..... .....+.+++|+ .+.+ .+-..++.|.-.++..... ............+.+
T Consensus 4 Ll~s~~-~~I~~~~l~~~~~~~~~-~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~g 81 (266)
T d1ijqa1 4 LFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (266)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEECC-CeEEEEECCCCcceeee-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcce
Confidence 334333 34777888765544333 345567788884 4444 4444567777666654221 111223333455778
Q ss_pred EEECCCCCEEEEE-ECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEc
Q psy10114 645 LKWSPDNQYLASG-GNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 723 (819)
Q Consensus 645 LafSpdg~~LaSG-S~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~ 723 (819)
+++...++.|..+ ...++|.+.++..................++.+|....++.+..| ..+.|.-.++..........
T Consensus 82 lAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~-~~~~I~r~~~dGs~~~~l~~ 160 (266)
T d1ijqa1 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVT 160 (266)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEEEEEC
T ss_pred EEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccC-CCcceeEeccCCCceecccc
Confidence 8988766655554 456789999998776555566566778999999988778777542 45678888876554444443
Q ss_pred C-CCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC--CCCEEEEEEecCCCEEEEEeCCCcEEEEECCC
Q psy10114 724 T-GSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH--SYRVLYLAMSPDGEAIVTGAGDETLRFWNVFS 800 (819)
Q Consensus 724 ~-~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH--~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s 800 (819)
. -.....+++++.++.++.+ ....+.|...++............ .....++++. ++....+-..++.|.-.+..+
T Consensus 161 ~~~~~p~gl~iD~~~~~lYw~-d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~ 238 (266)
T d1ijqa1 161 ENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (266)
T ss_dssp SSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred cccceeeEEEeeccccEEEEe-cCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCC
Confidence 3 3567899999999888885 456789999998754443333332 3446778876 334444445678888888777
Q ss_pred Cceec
Q psy10114 801 KVRSQ 805 (819)
Q Consensus 801 ~~~~~ 805 (819)
++..+
T Consensus 239 g~~~~ 243 (266)
T d1ijqa1 239 GSDVN 243 (266)
T ss_dssp CCCCE
T ss_pred CcceE
Confidence 65443
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.03 E-value=0.13 Score=57.35 Aligned_cols=257 Identities=15% Similarity=0.126 Sum_probs=148.7
Q ss_pred CeEEEEECCCeEEEEEcCCCceEEEEeccCC--CCCeEE-EEEcCCCCEEEEEec------CceEEEeecCCceEEEEEe
Q psy10114 524 QNVLSVGLGSCVYLWSACTSQVTRLCDLSAD--GNSVTS-VAWNERGNLVAVGTH------HGYVQVWDVSVAKQVHKLV 594 (819)
Q Consensus 524 ~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h--~~~Vts-LafSpdG~~LAsGs~------DGtI~IWDl~tgk~i~tl~ 594 (819)
..++.++.|+.|.-.|..+|+.......... ...+++ -.+ .+..+++|.. .|.|+-+|+++|+.+.++.
T Consensus 122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v--~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~ 199 (596)
T d1w6sa_ 122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (596)
T ss_dssp CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcE--ECCeEEEeeccccccccCceEEEECCCCcEEEEee
Confidence 3578888899999999999987654432211 111111 011 1446666653 4899999999999998875
Q ss_pred cCC-------------------------------------CCeE-EEEeC--Cceeee--ccC--------------CCe
Q psy10114 595 GHT-------------------------------------ARVG-ALAWN--GDMLSS--GSR--------------DRM 618 (819)
Q Consensus 595 gHs-------------------------------------~~V~-sLawn--g~~LaS--GS~--------------DGt 618 (819)
... ..+. .++.+ .+.+.. +.. ...
T Consensus 200 t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~s 279 (596)
T d1w6sa_ 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (596)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred ccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccc
Confidence 221 0010 11221 222222 111 345
Q ss_pred EEEEECCCCCccceEEEeccc-------CCeEEEEE-CCCCC---EEEEEECCCeEEEEECCCCceeEEEecCC--C---
Q psy10114 619 ILQRDVRTPNSQSERRLVGHR-------QEVCGLKW-SPDNQ---YLASGGNDNRLYVWNLHSMSPLQTYTEHL--A--- 682 (819)
Q Consensus 619 I~IWDi~t~~~~~v~~l~gH~-------~~VtsLaf-Spdg~---~LaSGS~DGtI~IWDl~t~~~i~t~~~h~--~--- 682 (819)
|...|+++++.........|. ....-+.. ..+|+ .++.++.+|.+.++|..+++++...+... .
T Consensus 280 ivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~ 359 (596)
T d1w6sa_ 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (596)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred ccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccc
Confidence 777888887754333333332 11222222 23443 57778889999999999998775432100 0
Q ss_pred --------CE--------------------------EEEEEcCCCCeEEEEEc---------------------------
Q psy10114 683 --------AV--------------------------KAIAWSPHHHGLLASGG--------------------------- 701 (819)
Q Consensus 683 --------~V--------------------------tsLafSPdg~~LLaSGg--------------------------- 701 (819)
++ ...+++|+...+++...
T Consensus 360 ~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (596)
T d1w6sa_ 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (596)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccccccccccccc
Confidence 00 12345555544333210
Q ss_pred ----c-----CCCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecC----
Q psy10114 702 ----G-----TADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGH---- 768 (819)
Q Consensus 702 ----G-----s~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH---- 768 (819)
+ ..-|.+.-||..+|+.+..........+=..+..|..++. |..||.++.+|..+|+.+.++.-.
T Consensus 440 ~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~--G~~Dg~l~A~Da~TGe~LW~~~~~~~~~ 517 (596)
T d1w6sa_ 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFY--GTLDGYLKARDSDTGDLLWKFKIPSGAI 517 (596)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred cCcccCcccCCCcceEEEEeCCCCceecccCCCCCCccceeEecCCEEEE--ECCCCeEEEEECCCCcEeeEEECCCCcc
Confidence 0 0125788899999998877655544433334456777776 889999999999999999988732
Q ss_pred CCCEEEEEEecCCC-EEEEE
Q psy10114 769 SYRVLYLAMSPDGE-AIVTG 787 (819)
Q Consensus 769 ~~~VtsLafSpDG~-~LaSG 787 (819)
..++ .+.-||+ ||+..
T Consensus 518 a~P~---tY~~dGkQYvav~ 534 (596)
T d1w6sa_ 518 GYPM---TYTHKGTQYVAIY 534 (596)
T ss_dssp SCCE---EEEETTEEEEEEE
T ss_pred cCCe---EEEECCEEEEEEE
Confidence 3343 3445775 45543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.96 E-value=0.0097 Score=57.53 Aligned_cols=189 Identities=10% Similarity=0.059 Sum_probs=101.0
Q ss_pred CceeeeccCCCeEEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEEC-C-----CeEEEEECCCCceeEEEe--
Q psy10114 607 GDMLSSGSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGN-D-----NRLYVWNLHSMSPLQTYT-- 678 (819)
Q Consensus 607 g~~LaSGS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~-D-----GtI~IWDl~t~~~i~t~~-- 678 (819)
|+.++..+ +|.|.+.|+.+++. ..+..+.+.+...+|||||+.||.... + +.|.+.+..+++..+...
T Consensus 12 G~~v~f~~-~~dl~~~d~~~g~~---~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~ 87 (281)
T d1k32a2 12 GDRIIFVC-CDDLWEHDLKSGST---RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFS 87 (281)
T ss_dssp TTEEEEEE-TTEEEEEETTTCCE---EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCC
T ss_pred CCEEEEEe-CCcEEEEECCCCCE---EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecC
Confidence 66665443 45688889987663 456667778899999999999986543 2 247888887776543211
Q ss_pred ----cCCCCEEEEEEcCCCCeEEEEEccC---CCCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCC---
Q psy10114 679 ----EHLAAVKAIAWSPHHHGLLASGGGT---ADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQ--- 748 (819)
Q Consensus 679 ----~h~~~VtsLafSPdg~~LLaSGgGs---~DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssD--- 748 (819)
.........+|+|+|+.++.+.... ....+...+...+..... ........ +.+++...+......+
T Consensus 88 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 164 (281)
T d1k32a2 88 GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL--NLGPATHI-LFADGRRVIGRNTFELPHW 164 (281)
T ss_dssp EEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC--CSCSCSEE-EEETTEEEEEESCSCCTTS
T ss_pred CCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe--cCCcccee-eecCCCeEEEeecccccee
Confidence 1123456789999999888764311 123355556555443222 22222233 3444444443221111
Q ss_pred -------CeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCC--CcEEEEECCCCcee
Q psy10114 749 -------NQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD--ETLRFWNVFSKVRS 804 (819)
Q Consensus 749 -------g~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~D--GtIrIWdl~s~~~~ 804 (819)
............ ...............++++. .+.....+ ..|.++|+.+++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~ 227 (281)
T d1k32a2 165 KGYRGGTRGKIWIEVNSGA-FKKIVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLR 227 (281)
T ss_dssp TTCCSTTCCEEEEEEETTE-EEEEECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCE
T ss_pred eeeccCCcceeeeeccccc-eeeccCCccccceeeeeccc-cceecccccccceEEEeCCCCceE
Confidence 111222222222 22233334445556666553 22323333 35777787766543
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.88 E-value=0.062 Score=59.69 Aligned_cols=281 Identities=13% Similarity=0.058 Sum_probs=158.6
Q ss_pred CCeEEEEECCCeEEEEEcCCCceEEEEeccCCC------CCe-EEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEec
Q psy10114 523 SQNVLSVGLGSCVYLWSACTSQVTRLCDLSADG------NSV-TSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVG 595 (819)
Q Consensus 523 ~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~------~~V-tsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~g 595 (819)
++.+..++.++.|+-.|+.+|+..=..+..... ..+ ..++.. +..++.++.|+.+.-.|.++|+.+.....
T Consensus 68 ~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~t~~~~l~alda~tG~~~W~~~~ 145 (582)
T d1flga_ 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe--CCceEEecCCCeEEEecccccceeeeecc
Confidence 567777888888999999998875333222110 011 122222 45788899999999999999988765431
Q ss_pred --CC-C----CeEEEEeC---Cce-eeec------cCCCeEEEEECCCCCccceEEEec---------------------
Q psy10114 596 --HT-A----RVGALAWN---GDM-LSSG------SRDRMILQRDVRTPNSQSERRLVG--------------------- 637 (819)
Q Consensus 596 --Hs-~----~V~sLawn---g~~-LaSG------S~DGtI~IWDi~t~~~~~v~~l~g--------------------- 637 (819)
+. . ....+.-+ +.. ++.+ +..+.|.-+|.++++.........
T Consensus 146 ~~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~d~~~~g~~~~~~ 225 (582)
T d1flga_ 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred cCCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccCCcccccccccccccccccccc
Confidence 11 0 00011111 122 2221 235677888888775322111100
Q ss_pred -----------------ccCCe-EEEEECCCCCEEEEEEC------------------------CCeEEEEECCCCceeE
Q psy10114 638 -----------------HRQEV-CGLKWSPDNQYLASGGN------------------------DNRLYVWNLHSMSPLQ 675 (819)
Q Consensus 638 -----------------H~~~V-tsLafSpdg~~LaSGS~------------------------DGtI~IWDl~t~~~i~ 675 (819)
-...+ ..+++.+...++..+.. ...+.-.|.++++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~W 305 (582)
T d1flga_ 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccCCccceecCCCcccccceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhhh
Confidence 00111 23566677676665541 2357778999999887
Q ss_pred EEecCCC----------C-EEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeEEEcCC-------------------
Q psy10114 676 TYTEHLA----------A-VKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTG------------------- 725 (819)
Q Consensus 676 t~~~h~~----------~-VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~~l~~~------------------- 725 (819)
.++.... + +..+... +++..-+....+.++.+.+.|-.+|+.+......
T Consensus 306 ~~q~~~~D~wd~d~~~~p~l~d~~~~-~g~~~~~v~~~~k~g~~~vldr~tG~~i~~~~~~~~~~~~~~~d~~~~~~~~~ 384 (582)
T d1flga_ 306 FYQHTPNDAWDFSGNNELVLFDYKAK-DGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER 384 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEEEEEECS-SSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred cccccccccccccccccccccccccc-cccccceeEeecccccEEeecccCCcccccccccCccccccccccccccceec
Confidence 7763221 1 1122222 3332222222348899999999998866432110
Q ss_pred ---------------------------CCeEEEEEccCCCEEEEEEe-------------------------------cC
Q psy10114 726 ---------------------------SQVCNLAWSKHSSELVSTHG-------------------------------YS 747 (819)
Q Consensus 726 ---------------------------s~V~sLafSpdg~~LastsG-------------------------------ss 747 (819)
..-...+++|+...+++... ..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~P~~~gg~~w~~~a~dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 464 (582)
T d1flga_ 385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH 464 (582)
T ss_dssp TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred cccccccccccccccceEEECCCccCCcccccceecCCCCceeeeccccccccccccccccccccccccCccccccccCC
Confidence 01112345555554444211 11
Q ss_pred CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeccc
Q psy10114 748 QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKVRSQRE 807 (819)
Q Consensus 748 Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~DGtIrIWdl~s~~~~~k~ 807 (819)
.|.+.-+|+.+++.+.+...+. ++.+-..+..|..+++|+.||.++-+|..+++..-+.
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~ 523 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEE
Confidence 3578889999999988776442 2222233456778888999999999999999986543
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.86 E-value=0.44 Score=52.51 Aligned_cols=82 Identities=10% Similarity=0.037 Sum_probs=57.8
Q ss_pred CCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcEEEEEecCCCC-EEEEEEecCCC-
Q psy10114 705 DRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQVAKLTGHSYR-VLYLAMSPDGE- 782 (819)
Q Consensus 705 DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~l~sl~gH~~~-VtsLafSpDG~- 782 (819)
.|.+.-+|+.+|+.+.......++.+-..+..+..+++ |..||.++.+|.++|+.+.+++-.... -.-+.+..||+
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~--Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~q 542 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFT--GTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEE--eCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence 36788899999999888866555443334456777776 889999999999999999988732211 11245567885
Q ss_pred EEEEEe
Q psy10114 783 AIVTGA 788 (819)
Q Consensus 783 ~LaSGS 788 (819)
+|+..+
T Consensus 543 Yv~i~a 548 (582)
T d1flga_ 543 YLGVTV 548 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.83 E-value=0.13 Score=55.10 Aligned_cols=191 Identities=10% Similarity=0.077 Sum_probs=126.3
Q ss_pred Cceeee-ccCCCeEEEEECCCCCccceEEEecccCCeEEEEECC--CCCEEEEEECCC------------------eEEE
Q psy10114 607 GDMLSS-GSRDRMILQRDVRTPNSQSERRLVGHRQEVCGLKWSP--DNQYLASGGNDN------------------RLYV 665 (819)
Q Consensus 607 g~~LaS-GS~DGtI~IWDi~t~~~~~v~~l~gH~~~VtsLafSp--dg~~LaSGS~DG------------------tI~I 665 (819)
|+++++ -..+..|.+-|+++.+...+..+ ...+.+.++...+ +..+++.++++. .+.+
T Consensus 99 GrylFVNDkan~RVAvIdl~~fkt~kIi~i-Pn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ 177 (459)
T d1fwxa2 99 GRFLFMNDKANTRVARVRCDVMKCDAILEI-PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 177 (459)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEEC-SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred eeEEEEEcCCCceEEEEECcceeeeEEEec-CCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence 555544 45688999999988664333333 3445677777755 455777777632 3667
Q ss_pred EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCC-----------------------------------CeEEE
Q psy10114 666 WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTAD-----------------------------------RCIRF 710 (819)
Q Consensus 666 WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~D-----------------------------------gtIrI 710 (819)
.|..+.+...+... .+....++++++|+++++++-.+.. +.+.+
T Consensus 178 ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~V 256 (459)
T d1fwxa2 178 VDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 256 (459)
T ss_dssp EETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCcee
Confidence 89988887766653 3355688999999999988742221 22344
Q ss_pred EECCCC---ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEEEEECCCCcE------------EEEEecCCCCEEEE
Q psy10114 711 WNTLTG---QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPTLTQ------------VAKLTGHSYRVLYL 775 (819)
Q Consensus 711 WDl~tg---~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~IWDl~s~k~------------l~sl~gH~~~VtsL 775 (819)
.|.++. ..+..+..+.....+..+|||++++++ |..+..+.++|++.... ..+.+ ..-....-
T Consensus 257 VD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~Va-GKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e-lglgPLht 334 (459)
T d1fwxa2 257 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVA-GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 334 (459)
T ss_dssp EECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEE-CTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB-CCSCEEEE
T ss_pred ecccccCCcceeEEEecCCCCCceEECCCCCEEEEe-CCcCCcEEEEEehhhhhhhcccCCccccEEeecc-cCcCcccc
Confidence 444421 223344555566788999999999986 77899999999863221 11111 23346778
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCC
Q psy10114 776 AMSPDGEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 776 afSpDG~~LaSGS~DGtIrIWdl~s~ 801 (819)
+|+.+|.-..|---|..|--|++...
T Consensus 335 ~fd~~g~aytslfids~v~kw~~~~~ 360 (459)
T d1fwxa2 335 AFDGRGNAYTSLFLDSQVVKWNIEDA 360 (459)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred ccCCCceEEEEeeccceEEEEecchh
Confidence 99888865566668999999998543
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.24 E-value=0.77 Score=46.78 Aligned_cols=184 Identities=14% Similarity=0.208 Sum_probs=122.5
Q ss_pred EEEEEecCCeEEEEECCCeEEEEEcCCC-ceEEEEeccC--CCCCeEEEEEcCCCCEEEEEe-------cCceEEEeecC
Q psy10114 516 LNLVDWSSQNVLSVGLGSCVYLWSACTS-QVTRLCDLSA--DGNSVTSVAWNERGNLVAVGT-------HHGYVQVWDVS 585 (819)
Q Consensus 516 v~~ldwS~~~LLa~g~Dg~V~LWd~~tg-~~~~l~~l~~--h~~~VtsLafSpdG~~LAsGs-------~DGtI~IWDl~ 585 (819)
+.-..|-....++-=.+..|+-|+.+.. +..++.+..+ .+..|..-..++++++++..+ -.|.+++|..+
T Consensus 105 VvfWkWis~~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~e 184 (327)
T d1utca2 105 VTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 184 (327)
T ss_dssp CCEEEESSSSEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred cEEEEecCCCEEEEEcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEec
Confidence 3456788888777778899999999543 3444444322 135677888889999887643 24789999987
Q ss_pred CceEEEEEecCCCCeEEEEeCCc-----eeeec---cCCCeEEEEECCCCCc--cc--eEEE------ecccCCeEEEEE
Q psy10114 586 VAKQVHKLVGHTARVGALAWNGD-----MLSSG---SRDRMILQRDVRTPNS--QS--ERRL------VGHRQEVCGLKW 647 (819)
Q Consensus 586 tgk~i~tl~gHs~~V~sLawng~-----~LaSG---S~DGtI~IWDi~t~~~--~~--v~~l------~gH~~~VtsLaf 647 (819)
.+ .-+.++||.+....+..+|+ .++.+ ...+.+.+.++..+.. .. .+.. ..-.+--.++..
T Consensus 185 r~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqv 263 (327)
T d1utca2 185 RK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI 263 (327)
T ss_dssp TT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEE
T ss_pred cC-cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEe
Confidence 54 45667888776666666433 22222 2347889999876321 11 1111 112344567888
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEE
Q psy10114 648 SPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASG 700 (819)
Q Consensus 648 Spdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSG 700 (819)
|+.-..+..-+.-|.|.++|++++.++..-+-....|..-+-+.+...+++..
T Consensus 264 s~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VN 316 (327)
T d1utca2 264 SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN 316 (327)
T ss_dssp ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred eccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEEC
Confidence 88888899999999999999999999888776666666555555555555554
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=95.75 E-value=0.33 Score=48.97 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=68.9
Q ss_pred eEEEEEcCCCCEEEEEecC-----c------eEEEeecCCceEE--EEEe-cCCCCeEEEEe--CCceeeeccCC-CeEE
Q psy10114 558 VTSVAWNERGNLVAVGTHH-----G------YVQVWDVSVAKQV--HKLV-GHTARVGALAW--NGDMLSSGSRD-RMIL 620 (819)
Q Consensus 558 VtsLafSpdG~~LAsGs~D-----G------tI~IWDl~tgk~i--~tl~-gHs~~V~sLaw--ng~~LaSGS~D-GtI~ 620 (819)
+.......+|+.++.|+.+ + .+.+||..+++-. .... .+.....+.++ ++.+++.|+.+ ..+.
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~ 101 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 101 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCccee
Confidence 3444445567777777642 1 3678999877532 2222 23322233344 67788887655 6899
Q ss_pred EEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC------CeEEEEECCCCc
Q psy10114 621 QRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND------NRLYVWNLHSMS 672 (819)
Q Consensus 621 IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D------GtI~IWDl~t~~ 672 (819)
+||..+........+.... .-.+.+..+||+.++.|+.+ +.+.+||..+.+
T Consensus 102 ~yd~~~~~w~~~~~~~~~r-~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~ 158 (387)
T d1k3ia3 102 LYDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 158 (387)
T ss_dssp EEEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EecCccCcccccccccccc-cccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence 9999876543222222222 22456677899999988753 358999987764
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.92 E-value=1 Score=47.14 Aligned_cols=140 Identities=11% Similarity=0.007 Sum_probs=85.3
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEecCCCCeEEEEeCCceeeeccCCCeEEEEECCCCCccceEE-
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLVGHTARVGALAWNGDMLSSGSRDRMILQRDVRTPNSQSERR- 634 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~gHs~~V~sLawng~~LaSGS~DGtI~IWDi~t~~~~~v~~- 634 (819)
..|..++|+.+ .|++.. ++.+..++..+-........-...+.++.+++..++....+|.+.++++..........
T Consensus 87 p~v~~vafs~d--~l~v~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 163 (381)
T d1xipa_ 87 PDVIFVCFHGD--QVLVST-RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQN 163 (381)
T ss_dssp TTEEEEEEETT--EEEEEE-SSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEES
T ss_pred CCeEEEEeeCC--EEEEEe-CCCEEEEEeeccccccccccccccccceecCCceeEEEecCCCEEEEEeccCccccccCC
Confidence 36899999744 566654 45678888776555555555567788999988888888889999999998865322210
Q ss_pred --EecccCCeEEEEECCCCCEEEEEECCCeEEE-EECCCCceeEEEecCCCCEEEEEEcCCCCeEEEE
Q psy10114 635 --LVGHRQEVCGLKWSPDNQYLASGGNDNRLYV-WNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLAS 699 (819)
Q Consensus 635 --l~gH~~~VtsLafSpdg~~LaSGS~DGtI~I-WDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaS 699 (819)
-..-.+.+.+++|++.|.+++++..++ ..+ -++.....+.........|.+|.|-.+...+++-
T Consensus 164 v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 164 VTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence 011235677788887777777764332 111 1111111110001234568899998766544443
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.77 E-value=1.7 Score=41.50 Aligned_cols=219 Identities=14% Similarity=0.070 Sum_probs=98.8
Q ss_pred eEEEeecCCceEEEE--EecCCCCeEEEEeCCceeeeccCC---------CeEEEEECCCCCccceEEEecccCCeEEEE
Q psy10114 578 YVQVWDVSVAKQVHK--LVGHTARVGALAWNGDMLSSGSRD---------RMILQRDVRTPNSQSERRLVGHRQEVCGLK 646 (819)
Q Consensus 578 tI~IWDl~tgk~i~t--l~gHs~~V~sLawng~~LaSGS~D---------GtI~IWDi~t~~~~~v~~l~gH~~~VtsLa 646 (819)
.+.+||.++++-... +......-..+..++..++.|+.. ..+.++|..+........+......-.+..
T Consensus 20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~~~ 99 (288)
T d1zgka1 20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV 99 (288)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE
T ss_pred eEEEEECCCCeEEECCCCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceeccc
Confidence 577899888753332 222222233444466677776631 356778877654332221111111112222
Q ss_pred ECCCCCEEEEEECCCe-----EEEEECCCCceeEEEecCC---CCEEEEEEcCCCCeEEEEEccC---CCCeEEEEECCC
Q psy10114 647 WSPDNQYLASGGNDNR-----LYVWNLHSMSPLQTYTEHL---AAVKAIAWSPHHHGLLASGGGT---ADRCIRFWNTLT 715 (819)
Q Consensus 647 fSpdg~~LaSGS~DGt-----I~IWDl~t~~~i~t~~~h~---~~VtsLafSPdg~~LLaSGgGs---~DgtIrIWDl~t 715 (819)
+ +++.++.|+.++. ...+|..+..-.. ..... .....+.. ...+++.|+.. ....+..||..+
T Consensus 100 ~--~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~---~~~~~~~GG~~~~~~~~~~~~~d~~~ 173 (288)
T d1zgka1 100 I--DGHIYAVGGSHGCIHHNSVERYEPERDEWHL-VAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPER 173 (288)
T ss_dssp E--TTEEEEECCEETTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred c--ceeeEEecceecccccceeeeeccccCcccc-ccccccccccceeeee---eecceEecCcccccccceEEEeeccc
Confidence 2 5566665554433 4456665543211 11111 11112221 23355555411 234578888877
Q ss_pred CceeEEEcCCCC--eEEEEEccCCCEEEEEEecC----CCeEEEEECCCCcEEEEEecCCCCEEEEEEecCCCEEEEEeC
Q psy10114 716 GQPMQCVDTGSQ--VCNLAWSKHSSELVSTHGYS----QNQILVWKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG 789 (819)
Q Consensus 716 g~~v~~l~~~s~--V~sLafSpdg~~LastsGss----Dg~I~IWDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSGS~ 789 (819)
++....-..... ..+.+. .++ .+....|.. ......+|..+.+....-.....+..+-+..-+++.++.|+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~-~~~-~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 251 (288)
T d1zgka1 174 NEWRMITAMNTIRSGAGVCV-LHN-CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGY 251 (288)
T ss_dssp TEEEECCCCSSCCBSCEEEE-ETT-EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred cccccccccccccccccccc-eee-eEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEecC
Confidence 654322211111 112222 233 333332222 235677777665443221111222211222236777777765
Q ss_pred CC-----cEEEEECCCCcee
Q psy10114 790 DE-----TLRFWNVFSKVRS 804 (819)
Q Consensus 790 DG-----tIrIWdl~s~~~~ 804 (819)
++ .+.+||+.+.+-.
T Consensus 252 ~~~~~~~~v~~yd~~~~~W~ 271 (288)
T d1zgka1 252 DGHTFLDSVECYDPDTDTWS 271 (288)
T ss_dssp CSSCBCCEEEEEETTTTEEE
T ss_pred CCCeecceEEEEECCCCEEE
Confidence 54 3788999887643
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=91.60 E-value=7.5 Score=39.28 Aligned_cols=164 Identities=10% Similarity=0.088 Sum_probs=92.7
Q ss_pred CceEEEeecCCceE-EEE--EecCC-----CCeEEEEe----CCc-eeeec---cCCCeEEEEECCCCCccc--eEEEec
Q psy10114 576 HGYVQVWDVSVAKQ-VHK--LVGHT-----ARVGALAW----NGD-MLSSG---SRDRMILQRDVRTPNSQS--ERRLVG 637 (819)
Q Consensus 576 DGtI~IWDl~tgk~-i~t--l~gHs-----~~V~sLaw----ng~-~LaSG---S~DGtI~IWDi~t~~~~~--v~~l~g 637 (819)
.|.|.++|+.+.+. ... +.+.. -.-..++. ++. +|++. ....+|-++++....... +.....
T Consensus 67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~ 146 (340)
T d1v04a_ 67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 146 (340)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence 47888888865432 111 12111 12234443 233 34443 345678888876544221 111111
Q ss_pred -ccCCeEEEEECCCCCEEEEEEC---------------CCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEc
Q psy10114 638 -HRQEVCGLKWSPDNQYLASGGN---------------DNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGG 701 (819)
Q Consensus 638 -H~~~VtsLafSpdg~~LaSGS~---------------DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGg 701 (819)
......+++...++..++|-.. -+...+|....++. ......-..-+.|+++|+++.++++..
T Consensus 147 ~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~-~~~~~~l~~pNGI~~s~d~~~lyVa~t 225 (340)
T d1v04a_ 147 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDV-RVVAEGFDFANGINISPDGKYVYIAEL 225 (340)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCE-EEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCce-EEEcCCCCccceeEECCCCCEEEEEeC
Confidence 1234688888888888877321 02233444333333 222233456789999999999988875
Q ss_pred cCCCCeEEEEECCCCcee---EEEcCCCCeEEEEEcc-CCCEEEE
Q psy10114 702 GTADRCIRFWNTLTGQPM---QCVDTGSQVCNLAWSK-HSSELVS 742 (819)
Q Consensus 702 Gs~DgtIrIWDl~tg~~v---~~l~~~s~V~sLafSp-dg~~Las 742 (819)
..+.|+.|++...... ..+......-++.+.+ +|...++
T Consensus 226 --~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva 268 (340)
T d1v04a_ 226 --LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG 268 (340)
T ss_dssp --GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred --CCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEE
Confidence 7889999998754322 3335566788899876 4555544
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=91.08 E-value=6.5 Score=40.33 Aligned_cols=194 Identities=8% Similarity=0.121 Sum_probs=115.6
Q ss_pred ecCCeEEEEECCCeEEEEEcCCCceEEEEeccCCCCCeEEEEEc------CCCCEEEEEec--C--ceEEEeecC-CceE
Q psy10114 521 WSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSADGNSVTSVAWN------ERGNLVAVGTH--H--GYVQVWDVS-VAKQ 589 (819)
Q Consensus 521 wS~~~LLa~g~Dg~V~LWd~~tg~~~~l~~l~~h~~~VtsLafS------pdG~~LAsGs~--D--GtI~IWDl~-tgk~ 589 (819)
.+...+++....+.|+++|++ |+..+. +. .+.++.|..- ..+.-+++++. + -+|.+|.+. ....
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~--~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~ 112 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLE-GKMLHS--YH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETT-CCEEEE--CC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred cCccEEEEEcCcCCEEEEcCC-CcEEEe--cc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence 344577777888889999986 444332 22 3566665543 22334555553 2 257788775 2333
Q ss_pred EEEEecC-------CCCeEEEEe--C---Cc-eeeeccCCCeEEEEECCCCCc-----cceEEEecccCCeEEEEECCCC
Q psy10114 590 VHKLVGH-------TARVGALAW--N---GD-MLSSGSRDRMILQRDVRTPNS-----QSERRLVGHRQEVCGLKWSPDN 651 (819)
Q Consensus 590 i~tl~gH-------s~~V~sLaw--n---g~-~LaSGS~DGtI~IWDi~t~~~-----~~v~~l~gH~~~VtsLafSpdg 651 (819)
+..+... ...+..++. + +. ++++...+|.+..|.+..... ..++.+ .-..++.++.+..+.
T Consensus 113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f-~~~~q~EGCVvDde~ 191 (353)
T d1h6la_ 113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAF-KMNSQTEGMAADDEY 191 (353)
T ss_dssp EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEE-ECSSCEEEEEEETTT
T ss_pred cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeecc-CCCCccceEEEeCCC
Confidence 4444321 123556666 2 33 567778899999887743221 122233 235678999999999
Q ss_pred CEEEEEECCCeEEEEECCC--Cc---eeEEEec--CCCCEEEEEEc--CCCC-eEEEEEccCCCCeEEEEECCCC-ceeE
Q psy10114 652 QYLASGGNDNRLYVWNLHS--MS---PLQTYTE--HLAAVKAIAWS--PHHH-GLLASGGGTADRCIRFWNTLTG-QPMQ 720 (819)
Q Consensus 652 ~~LaSGS~DGtI~IWDl~t--~~---~i~t~~~--h~~~VtsLafS--Pdg~-~LLaSGgGs~DgtIrIWDl~tg-~~v~ 720 (819)
+.|..+-++.-|..++... .. .+....+ ..+.+..|+.- .++. ++++|.. .+++..+||..+. +.+.
T Consensus 192 ~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQ--G~n~f~vydr~~~~~~~g 269 (353)
T d1h6la_ 192 GSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQ--GNSSYAIYERQGQNKYVA 269 (353)
T ss_dssp TEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESSTTCCEEE
T ss_pred CcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcC--CCCeEEEEecCCCccccc
Confidence 9999998887777776542 11 2222222 35667777754 3444 6666665 5789999998763 4444
Q ss_pred EE
Q psy10114 721 CV 722 (819)
Q Consensus 721 ~l 722 (819)
.+
T Consensus 270 ~F 271 (353)
T d1h6la_ 270 DF 271 (353)
T ss_dssp EE
T ss_pred eE
Confidence 43
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=90.80 E-value=3.9 Score=42.12 Aligned_cols=115 Identities=13% Similarity=0.143 Sum_probs=75.0
Q ss_pred CEEEEEE--cCC-CCeEEEEEccCCCCeEEEEECC---CC----ceeEEEcCCCCeEEEEEccCCCEEEEEEecCCCeEE
Q psy10114 683 AVKAIAW--SPH-HHGLLASGGGTADRCIRFWNTL---TG----QPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQIL 752 (819)
Q Consensus 683 ~VtsLaf--SPd-g~~LLaSGgGs~DgtIrIWDl~---tg----~~v~~l~~~s~V~sLafSpdg~~LastsGssDg~I~ 752 (819)
.+..+|+ ++. |...+.... .+|.+..|.+. .+ +.++.+..+.++..|++....+.|++ +.++..|.
T Consensus 129 ~vYGlc~y~~~~~g~~~afv~~--k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~Lyi--sEE~~Giw 204 (353)
T d1h6la_ 129 EVYGFSLYHSQKTGKYYAMVTG--KEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYI--AEEDEAIW 204 (353)
T ss_dssp SCCCEEEEECTTTCCEEEEEEC--SSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEE--EETTTEEE
T ss_pred cceEEEEEecCCCCeEEEEEEc--CCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEEE--ecCccceE
Confidence 3566666 665 443444443 78888888653 33 35667788899999999999999999 66777776
Q ss_pred EEECC-----CCcEEEEEec--CCCCEEEEEEec--C--CCEEEEEeCCCcEEEEECCCC
Q psy10114 753 VWKYP-----TLTQVAKLTG--HSYRVLYLAMSP--D--GEAIVTGAGDETLRFWNVFSK 801 (819)
Q Consensus 753 IWDl~-----s~k~l~sl~g--H~~~VtsLafSp--D--G~~LaSGS~DGtIrIWdl~s~ 801 (819)
.++.. ....+....+ ..+.+-.++.-. + |-.|+|.-+|++..+||..+.
T Consensus 205 ~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~ 264 (353)
T d1h6la_ 205 KFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ 264 (353)
T ss_dssp EEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 66654 1222322222 356788887643 3 334455556889999998764
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=89.86 E-value=11 Score=37.90 Aligned_cols=170 Identities=14% Similarity=0.099 Sum_probs=93.5
Q ss_pred CCeEEEEECCCCCccce-EEEecc-----cCCeEEEEE--CCCCC-EEEEEE---CCCeEEEEECCCCcee----EEEec
Q psy10114 616 DRMILQRDVRTPNSQSE-RRLVGH-----RQEVCGLKW--SPDNQ-YLASGG---NDNRLYVWNLHSMSPL----QTYTE 679 (819)
Q Consensus 616 DGtI~IWDi~t~~~~~v-~~l~gH-----~~~VtsLaf--Spdg~-~LaSGS---~DGtI~IWDl~t~~~i----~t~~~ 679 (819)
.|.|.++|+.+.+.... ..+.+. .-...++.. ..+|+ +|++.. ...+|.+|++...... .++..
T Consensus 67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~ 146 (340)
T d1v04a_ 67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 146 (340)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence 58899999887653221 111111 112355554 44565 455443 3457888887543321 22221
Q ss_pred -CCCCEEEEEEcCCCCeEEEEEc-cCC------------CCeEEEEECCCCceeEEEcCCCCeEEEEEccCCCEEEEEEe
Q psy10114 680 -HLAAVKAIAWSPHHHGLLASGG-GTA------------DRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHG 745 (819)
Q Consensus 680 -h~~~VtsLafSPdg~~LLaSGg-Gs~------------DgtIrIWDl~tg~~v~~l~~~s~V~sLafSpdg~~LastsG 745 (819)
.....+++++..++. ++++-. ... -+...+|....++.......-...+.++++||++.++++ .
T Consensus 147 ~~~~~pNDv~~~~~g~-fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa-~ 224 (340)
T d1v04a_ 147 KLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIA-E 224 (340)
T ss_dssp TTCSSEEEEEEEETTE-EEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEE-E
T ss_pred ccccCccceEEecCCC-EEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEE-e
Confidence 234578888888886 444421 000 122334433344433333444678999999999999886 4
Q ss_pred cCCCeEEEEECCCCcEEEEE--ecCCCCEEEEEEec-CCCEEEEE
Q psy10114 746 YSQNQILVWKYPTLTQVAKL--TGHSYRVLYLAMSP-DGEAIVTG 787 (819)
Q Consensus 746 ssDg~I~IWDl~s~k~l~sl--~gH~~~VtsLafSp-DG~~LaSG 787 (819)
...++|++|++.....+... ..-.+..-.+.+.+ +|.+.+.+
T Consensus 225 t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 225 LLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred CCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence 56788999998744332221 12344567788876 44444433
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.37 E-value=3.9 Score=38.75 Aligned_cols=218 Identities=14% Similarity=0.109 Sum_probs=100.7
Q ss_pred CeEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC---------ceEEEeecCCceEEEEE--ecCCCCeE
Q psy10114 533 SCVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---------GYVQVWDVSVAKQVHKL--VGHTARVG 601 (819)
Q Consensus 533 g~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---------GtI~IWDl~tgk~i~tl--~gHs~~V~ 601 (819)
..+.+||..+++..++..+......-..+.. ++..++.|+.. ..+.+||..+.+....- ......-.
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~ 96 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 96 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence 4588999999988776655543333333333 45666666531 35677887766543321 11122223
Q ss_pred EEEeCCceeeeccCCCe-----EEEEECCCCCccceEEEecccCCeEEEEECCCCCEEEEEECC-----CeEEEEECCCC
Q psy10114 602 ALAWNGDMLSSGSRDRM-----ILQRDVRTPNSQSERRLVGHRQEVCGLKWSPDNQYLASGGND-----NRLYVWNLHSM 671 (819)
Q Consensus 602 sLawng~~LaSGS~DGt-----I~IWDi~t~~~~~v~~l~gH~~~VtsLafSpdg~~LaSGS~D-----GtI~IWDl~t~ 671 (819)
+...++..++.|+.++. ...+|..+..................... ++..++.|+.+ ..+..||..+.
T Consensus 97 ~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~~~GG~~~~~~~~~~~~~d~~~~ 174 (288)
T d1zgka1 97 VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN 174 (288)
T ss_dssp EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred ccccceeeEEecceecccccceeeeeccccCccccccccccccccceeeee--eecceEecCcccccccceEEEeecccc
Confidence 44456666666655443 33455555332111111111111122222 34455555543 35778887665
Q ss_pred ceeEEEecCCCC--EEEEEEcCCCCeEEEEEccCC---CCeEEEEECCCCceeEEEcCCC-C-eEEEEEccCCCEEEEEE
Q psy10114 672 SPLQTYTEHLAA--VKAIAWSPHHHGLLASGGGTA---DRCIRFWNTLTGQPMQCVDTGS-Q-VCNLAWSKHSSELVSTH 744 (819)
Q Consensus 672 ~~i~t~~~h~~~--VtsLafSPdg~~LLaSGgGs~---DgtIrIWDl~tg~~v~~l~~~s-~-V~sLafSpdg~~Lasts 744 (819)
+-.. ....... ..+.+.. +..+++.|+... -.....+|..+.+....-.... . -.+++. -+++.++.
T Consensus 175 ~~~~-~~~~~~~~~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~-- 248 (288)
T d1zgka1 175 EWRM-ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVL-- 248 (288)
T ss_dssp EEEE-CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEE--
T ss_pred cccc-ccccccccccccccce--eeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEEEE--
Confidence 4221 1111111 1122222 234555554221 2356778877765433222111 1 122332 25554444
Q ss_pred ecCC-----CeEEEEECCCCc
Q psy10114 745 GYSQ-----NQILVWKYPTLT 760 (819)
Q Consensus 745 GssD-----g~I~IWDl~s~k 760 (819)
|+.+ ..+.+||..+.+
T Consensus 249 GG~~~~~~~~~v~~yd~~~~~ 269 (288)
T d1zgka1 249 GGYDGHTFLDSVECYDPDTDT 269 (288)
T ss_dssp CCBCSSCBCCEEEEEETTTTE
T ss_pred ecCCCCeecceEEEEECCCCE
Confidence 4332 347888887643
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.56 E-value=4.3 Score=42.17 Aligned_cols=136 Identities=13% Similarity=0.119 Sum_probs=80.3
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCCceeEEEecCCCCEEEEEEcCCCCeEEEEEccCCCCeEEEEECCCCceeE
Q psy10114 641 EVCGLKWSPDNQYLASGGNDNRLYVWNLHSMSPLQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQ 720 (819)
Q Consensus 641 ~VtsLafSpdg~~LaSGS~DGtI~IWDl~t~~~i~t~~~h~~~VtsLafSPdg~~LLaSGgGs~DgtIrIWDl~tg~~v~ 720 (819)
.|..++|+.| .++.. .++.+..++..+-........-..++.++.++|.. +++.. .++.+.++++.+++...
T Consensus 88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~--~~l~~---~~~~~~~~~l~~~~~~~ 159 (381)
T d1xipa_ 88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILN---SVNDLSALDLRTKSTKQ 159 (381)
T ss_dssp TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEE---TTSEEEEEETTTCCEEE
T ss_pred CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCce--eEEEe---cCCCEEEEEeccCcccc
Confidence 5788899744 45554 45678888887655554544456778899998864 33332 68999999998886432
Q ss_pred E------EcCCCCeEEEEEccCCCEEEEEEecCCCeEEE-EECCCCcEEEEEecCCCCEEEEEEecCCCEEEEE
Q psy10114 721 C------VDTGSQVCNLAWSKHSSELVSTHGYSQNQILV-WKYPTLTQVAKLTGHSYRVLYLAMSPDGEAIVTG 787 (819)
Q Consensus 721 ~------l~~~s~V~sLafSpdg~~LastsGssDg~I~I-WDl~s~k~l~sl~gH~~~VtsLafSpDG~~LaSG 787 (819)
. +.-.+.+.+++|++.|..+++ |..+ ...+ -++.....+..-......|.++.|-.+..++++-
T Consensus 160 ~~~~v~~~~~~~~~~~v~ws~kgkq~v~--~~g~-~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 160 LAQNVTSFDVTNSQLAVLLKDRSFQSFA--WRNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp EEESEEEEEECSSEEEEEETTSCEEEEE--EETT-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ccCCcceEEecCCceEEEEeCCcEEEEE--eCCC-ceeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence 2 223466788888888887776 3221 1111 1111111000001133467788887776666654
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.15 E-value=16 Score=37.41 Aligned_cols=242 Identities=10% Similarity=0.052 Sum_probs=121.5
Q ss_pred ceEEEEEec--CCeEE-EEECCC----eEEEEEcCCCceEEEEeccCCCCCeEEEEEcCCCCEEEEEecC----------
Q psy10114 514 FYLNLVDWS--SQNVL-SVGLGS----CVYLWSACTSQVTRLCDLSADGNSVTSVAWNERGNLVAVGTHH---------- 576 (819)
Q Consensus 514 fyv~~ldwS--~~~LL-a~g~Dg----~V~LWd~~tg~~~~l~~l~~h~~~VtsLafSpdG~~LAsGs~D---------- 576 (819)
+.+..++.+ ++.++ +.+.+| .+++.|+.+++..... +.. .....++|++|++.|+-...+
T Consensus 125 ~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~-i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~ 201 (430)
T d1qfma1 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (430)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred ceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc-ccc--ccccceEEcCCCCEEEEEEeccccCcccccc
Confidence 344444444 44443 334444 4899999999875422 211 122568999999988755432
Q ss_pred ------ceEEEeecCCce--EEEEEecCC--CCeEEEEe--CCceeeec---cCCCe--EEEEECCCCCcc------ceE
Q psy10114 577 ------GYVQVWDVSVAK--QVHKLVGHT--ARVGALAW--NGDMLSSG---SRDRM--ILQRDVRTPNSQ------SER 633 (819)
Q Consensus 577 ------GtI~IWDl~tgk--~i~tl~gHs--~~V~sLaw--ng~~LaSG---S~DGt--I~IWDi~t~~~~------~v~ 633 (819)
..|..+.+.+.. ....+.... ..+..+.. ++.+++.. +.++. +.+.|....... ...
T Consensus 202 ~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 281 (430)
T d1qfma1 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (430)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeE
Confidence 257777766542 233333332 23444444 45554422 22333 444454432211 111
Q ss_pred EEecccCCeEEEEECCCCCEEEEEEC----CCeEEEEECCCCce--eEE-EecCCCCEEEEEEcCCCCeEEEEEccCCCC
Q psy10114 634 RLVGHRQEVCGLKWSPDNQYLASGGN----DNRLYVWNLHSMSP--LQT-YTEHLAAVKAIAWSPHHHGLLASGGGTADR 706 (819)
Q Consensus 634 ~l~gH~~~VtsLafSpdg~~LaSGS~----DGtI~IWDl~t~~~--i~t-~~~h~~~VtsLafSPdg~~LLaSGgGs~Dg 706 (819)
..........-+. + +|..+..-++ ++.|...++.+... ... +..+...+..-.+...+..+++..-...-.
T Consensus 282 ~~~~~~~~~~~~~-~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~ 359 (430)
T d1qfma1 282 LIDNFEGEYDYVT-N-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (430)
T ss_dssp EECSSSSCEEEEE-E-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred eecccccceEEEe-c-CCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEe
Confidence 1222222222222 2 2333333222 35677777765432 123 333455555545555556666654311235
Q ss_pred eEEEEECCCCceeEEEcC-CCCeEEEEEccCCCEEEEEEec--CCCeEEEEECCCCc
Q psy10114 707 CIRFWNTLTGQPMQCVDT-GSQVCNLAWSKHSSELVSTHGY--SQNQILVWKYPTLT 760 (819)
Q Consensus 707 tIrIWDl~tg~~v~~l~~-~s~V~sLafSpdg~~LastsGs--sDg~I~IWDl~s~k 760 (819)
.|++++..+++....... .+.+..+...++...+.....+ .-.++.-+|+.+++
T Consensus 360 ~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~ 416 (430)
T d1qfma1 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (430)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence 688999988876554433 2345555555666655542111 23577888887764
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=80.73 E-value=35 Score=35.25 Aligned_cols=52 Identities=8% Similarity=0.099 Sum_probs=36.9
Q ss_pred CCeEEEEEcCCCCEEEEEecCceEEEeecCCceEEEEEe--------cCCCCeEEEEeCC
Q psy10114 556 NSVTSVAWNERGNLVAVGTHHGYVQVWDVSVAKQVHKLV--------GHTARVGALAWNG 607 (819)
Q Consensus 556 ~~VtsLafSpdG~~LAsGs~DGtI~IWDl~tgk~i~tl~--------gHs~~V~sLawng 607 (819)
+..++|+|.|||+++++--.+|.|++++.++++...... .-.+....|++++
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~P 86 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP 86 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCC
Confidence 567899999999988776567999999987765433221 1134567888853
|