Psyllid ID: psy10135

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
Protein Sequence
MDRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKDDEETGESSEGDSDSGSEEERGSKFVNSARPRDETAESKK
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccEEEEEcccccccHHHHccccHHEEEEcccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEEcccEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccccHHHHHHHHcccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEccHHcccHHHHHccHHHHHHHHHHHHcccEHHEccEEEcccEEEEEEEEcccccccccccccHHHEEEEEEEEEEEEcccHHcccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEHHcEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccEEEccHHHHHEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHcHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mdriktkdkhdrataeqvmdpRTRMILFKLISRGmvsevngcistgkeanvyhaspganykienLELEKEFAIKIFKTSILVfkdrdkyvngefrfrhgyckknprkMVRTWAEKEMRNLTRMYseglnvpkpilLKSHVLLMTFIgedgwpaaklkdtpltesgacklYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAqsvehdhpHALQFLRKDCDNVTVFVILnpvsdddekifkkwdsdyvtssdedeenvvdferdinliksgqgssntLIYQNIVglnadlsgpklipellaqdkddeetgessegdsdsgseeergskfvnsarprdetaeskk
Flexible Loop (DISEMBL)
mdriktkdkhdrataeqvmdprtrMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFktsilvfkdrdkyvngefrfrhgyckknprkmvrTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLkdtpltesgaCKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILnpvsdddekifkkwdsdyvtssdedeenvvdFERDINLiksgqgssnTLIYQNIVGLNADLSGPKLIPELLaqdkddeetgessegdsdsgseeergskfvnsarprdetaeskk
Low Complexity Region (SEG)
MDRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKddeetgessegdsdsgseeergsKFVNSARPRDETAESKK
Disordered region (IsUnstruct)
**********************TRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVT********VVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLI************************************************
Disordered Region (DISOPRED)
********KHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDI*******************************************************************************
Disordered Region (DISEMBL)
****************QVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSD*********ENVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQ******************************************
Disordered Region (DISPRO)
*DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGSSNTLIYQNIVGLNADL******************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKDDEETGESSEGDSDSGSEEERGSKFVNSARPRDETAESKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	351	2.2.26 [Sep-21-2011]
Q9BRS2	568	Serine/threonine-protein	yes	N/A	0.925	0.572	0.460	6e-92
Q54VD8	574	Serine/threonine-protein	yes	N/A	0.814	0.498	0.483	2e-86
Q922Q2	567	Serine/threonine-protein	yes	N/A	0.888	0.550	0.478	3e-85
O42650	497	Serine/threonine-protein	yes	N/A	0.900	0.635	0.452	4e-81
Q9DBU3	519	Serine/threonine-protein	no	N/A	0.643	0.435	0.491	5e-63
Q12196	484	Serine/threonine-protein	yes	N/A	0.658	0.477	0.506	4e-62
Q1RMT7	519	Serine/threonine-protein	no	N/A	0.643	0.435	0.486	4e-62
O14730	519	Serine/threonine-protein	no	N/A	0.643	0.435	0.482	2e-61
Q8SVI7	409	Probable serine/threonine	yes	N/A	0.900	0.772	0.359	1e-47
P34649	510	Putative RIO-type serine/	no	N/A	0.615	0.423	0.378	5e-44

>sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1 SV=2

 Score =  337 bits (865), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 186/404 (46%), Positives = 245/404 (60%), Gaps = 79/404 (19%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           D  + KDK DRAT EQV+DPRTRMILFK+++RG+++E+NGCISTGKEANVYHAS      
Sbjct: 145 DMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTANG-- 202

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                  +  AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMV+TWAEKEMRNL 
Sbjct: 203 -------ESRAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLI 255

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           R+ +  +  P+PI+L+SHVL+M+FIG+D  PA  LK+  L+ES A +LY + +  M R+Y
Sbjct: 256 RLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMY 315

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPV-- 239
               LVHADLSE+NML H   ++IIDV+QSVEHDHPHAL+FLRKDC NV  F + + V  
Sbjct: 316 QDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFMRHSVAV 375

Query: 240 ----------------------------------------SDD--DEKIFKKWDSDYVTS 257
                                                   S D  DE++FK+    Y+  
Sbjct: 376 MTVRELFEFVTDPSITHENMDAYLSKAMEIASQRTKEERSSQDHVDEEVFKRA---YIPR 432

Query: 258 SDEDEENVVDFERDINLI-------KSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQD 310
           +  + +N   +ERD+++I        +     + ++YQ + GL  DLSG + +P LL   
Sbjct: 433 TLNEVKN---YERDMDIIMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLENQ 489

Query: 311 ------KDDEETGESSEGDSDSGSEEERGSKFVNSARPRDETAE 348
                  D E+ G S   D+DS   EE+G    + ARP+  T +
Sbjct: 490 VEERTCSDSEDIGSSECSDTDS---EEQG----DHARPKKHTTD 526

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q54VD8|RIO1_DICDI Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum GN=rio1 PE=3 SV=1

 Score =  319 bits (817), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 162/335 (48%), Positives = 221/335 (65%), Gaps = 49/335 (14%)

Query: 4   IKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHA-SPGANYKI 62
           ++  DK DRAT EQV+DPRTR++LFK+I++G  SE+NGCISTGKEANVYHA +P      
Sbjct: 150 VRIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCISTGKEANVYHAFTPN----- 204

Query: 63  ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
                E+E A+K++KTSILVFKDRD+YV GEFRFR GY K NPRKMV+ WAEKE RNLTR
Sbjct: 205 -----EEERAVKVYKTSILVFKDRDRYVTGEFRFRRGYSKHNPRKMVKVWAEKEFRNLTR 259

Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN 182
           + + G+  P P++L++H+L+MTFIG+DG+ A +LKD  +++     +Y +C+ MM  L++
Sbjct: 260 LKNAGIPCPTPLILRNHILVMTFIGKDGYAAPRLKDATVSQEKFGVIYLDCIKMMRTLFH 319

Query: 183 KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVT----------- 231
           KC LVHADLSEYNML +K  L+IIDV+QSVEHDHPH+L FLR DC NVT           
Sbjct: 320 KCRLVHADLSEYNMLYYKNQLYIIDVSQSVEHDHPHSLDFLRMDCSNVTDFFRKKEVNTM 379

Query: 232 ------VFVILNPVSDDD-----EKIFKKWDSDYVTSSDE--DEE------------NVV 266
                  F+    +++D+     EK+ +K  S   T+ ++   EE             ++
Sbjct: 380 FIQELFEFITDLTITEDNIDQYLEKMLEKIQSRGETTDEQKIQEEVFRNAYIPRTLDQII 439

Query: 267 DFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPK 301
           D +RD+  I+ G+G    + YQN+ GL+ DL   K
Sbjct: 440 DLDRDMEKIERGEGRD--IFYQNLTGLSKDLQNIK 472

Required for the final endonucleolytic cleavage at site D converting 20S pre-rRNA into the mature 18S rRNA.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q922Q2|RIOK1_MOUSE Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2 SV=2

 Score =  315 bits (807), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 178/372 (47%), Positives = 228/372 (61%), Gaps = 60/372 (16%)

Query: 5   KTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHAS-PGANYKIE 63
           + KDK DRAT EQV+DPRTRMILFKL+ +  +SE++GCISTGKEANVY+AS P    +  
Sbjct: 147 RIKDKADRATVEQVLDPRTRMILFKLLHKDHISEIHGCISTGKEANVYYASTPSGESR-- 204

Query: 64  NLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRM 123
                   AIKI+KTSIL+FKDRDKYV GEFRFR GYCK NPRKMVRTWAEKEMRNL R+
Sbjct: 205 --------AIKIYKTSILMFKDRDKYVTGEFRFRRGYCKGNPRKMVRTWAEKEMRNLCRL 256

Query: 124 YSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNK 183
            +  +  P+PI L+SHVLLM FIG+D  PA  LK+  L+ES A +LY + +  M ++Y  
Sbjct: 257 KTANIPCPEPIRLRSHVLLMGFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRKMYQD 316

Query: 184 CHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF---------- 233
             LVHADLSE+NML H   ++IIDV+QSVEHDHPHAL+FLRKDC NV  F          
Sbjct: 317 ARLVHADLSEFNMLYHGGDVYIIDVSQSVEHDHPHALEFLRKDCTNVNDFFSKHAVAVMT 376

Query: 234 ------VILNPVSDDDE---------KIFKKWDSDYVTSSDE-DEE------------NV 265
                  + +P    D          +I  +   +  TS D  DEE             V
Sbjct: 377 VRELFDFVTDPSITADNMDAYLEKAMEIASQRTKEEKTSQDHVDEEVFKQAYIPRTLNEV 436

Query: 266 VDFERDINL---IKSGQGSSNT----LIYQNIVGLNADLSGPKLIPELLAQDKDDEETGE 318
            ++ERD+++   +K    + NT    ++YQ ++GL  DLSG + +P LL    + E   E
Sbjct: 437 KNYERDVDIMMRLKEEDMALNTQQDNILYQTVMGLKKDLSGVQKVPALL----ESEVKEE 492

Query: 319 SSEGDSDSGSEE 330
           +  G  D+G  E
Sbjct: 493 TCFGSDDAGGSE 504

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O42650|RIO1_SCHPO Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rio1 PE=3 SV=2

 Score =  301 bits (771), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 175/387 (45%), Positives = 228/387 (58%), Gaps = 71/387 (18%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           D+   KDK DRAT+EQV+DPRTRMIL KLI+ G +SE+NGCISTGKEANVYHA+      
Sbjct: 85  DKSSIKDKSDRATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHATN----- 139

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
               E  K FAIKI+KTSILVFKDRD+YV+GEFRFRHGY K+NPRKMVR WAEKE+RNL 
Sbjct: 140 ----EDGKHFAIKIYKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRLWAEKEIRNLK 195

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGED-GWPAAKLKDTPLTESGACKLYRECVVMMWRL 180
           R+ + G+  P+PILLK HVLLM+F+G+  GW   KLKD  +T   A KLY+     M  L
Sbjct: 196 RVAAAGIPCPEPILLKQHVLLMSFLGDKKGWAYPKLKDIDMTPGEATKLYQLVARNMRIL 255

Query: 181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNV-TVFVILNPV 239
           ++ CHLVHADLSEYN+L HK  ++ IDV+QSVEHDHP ++ FLR D  N+ T F  LN  
Sbjct: 256 FHVCHLVHADLSEYNLLYHKGKVYFIDVSQSVEHDHPQSIDFLRMDILNISTFFRRLNAG 315

Query: 240 SDDDEKIFKKWDSDYVTSSDEDE----------------------------------ENV 265
                ++FK     ++T     E                                  + V
Sbjct: 316 CLSLPQLFK-----FITEEGSCEKEAMKTRLNAIYEEEPTTEEYEEEFLKTYVPRTLDEV 370

Query: 266 VDFERDINLIKSGQGSSNTLIYQNIVGLNADLS-----------GPKLIPELLAQDKDDE 314
            D +RD  ++ +G    N+L+Y+++  LN D               +++P   ++  DD 
Sbjct: 371 YDIDRDTEIVNAG--GVNSLVYKHL--LNTDFQKLDLNDTTKNQNDQILPNETSESDDDA 426

Query: 315 ETGESSEGDSDSGSEEERGSKFVNSAR 341
            +  S E      +EEER S   +SA+
Sbjct: 427 NSISSME------NEEERTSDSKSSAK 447

Required for the final endonucleolytic cleavage at site D converting 20S pre-rRNA into the mature 18S rRNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9DBU3|RIOK3_MOUSE Serine/threonine-protein kinase RIO3 OS=Mus musculus GN=Riok3 PE=2 SV=3

 Score =  241 bits (615), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 112/228 (49%), Positives = 162/228 (71%), Gaps = 2/228 (0%)

Query: 8   DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGA--NYKIENL 65
           +K + +TAE+ +DP+TR++++K+++ GM+  + GCISTGKE+ V+HA  G+  + K +  
Sbjct: 222 EKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSLEDEKEDGK 281

Query: 66  ELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS 125
            +  E AIK+FKT++  FK+RDKY+  +FRF+  + K NPRK++R WAEKEM NLTRM  
Sbjct: 282 AIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQK 341

Query: 126 EGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH 185
            G+  P  +LLK H+L+M+FIG D  PA KLK+  L+       Y + + +M +LYN+C 
Sbjct: 342 AGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLSNEEMKDAYYQTLHLMQQLYNECT 401

Query: 186 LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           LVHADLSEYNML H   +++IDV+QSVE  HPH L+FL +DC NV+ F
Sbjct: 402 LVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQF 449

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q12196|RIO1_YEAST Serine/threonine-protein kinase RIO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIO1 PE=1 SV=1

 Score =  238 bits (608), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 165/247 (66%), Gaps = 16/247 (6%)

Query: 3   RIKT-KDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANY- 60
           R KT KDK +RAT E V+DPRT   L  +++RG+++++NGC+STGKEANVYHA  G    
Sbjct: 41  RAKTSKDKANRATVENVLDPRTMRFLKSMVTRGVIADLNGCLSTGKEANVYHAFAGTGKA 100

Query: 61  --------KIENLELE---KEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMV 109
                   + E LE +    E+AIKI+KTSILVFKDR++YV+GEFRFR+   + NPRKM+
Sbjct: 101 PVIDEETGQYEVLETDGSRAEYAIKIYKTSILVFKDRERYVDGEFRFRNSRSQHNPRKMI 160

Query: 110 RTWAEKEMRNLTRMYSEG-LNVPKPILLKSHVLLMTFIGE-DGWPAAKLKDTPLTESGAC 167
           + WAEKE RNL R+Y  G +  PKPI +K++VL+M F+   +G+ + KLKD P       
Sbjct: 161 KIWAEKEFRNLKRIYQSGVIPAPKPIEVKNNVLVMEFLSRGNGFASPKLKDYPYKNRDEI 220

Query: 168 -KLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKD 226
              Y   V  M  LY  C LVHADLSEYN +VH   L++IDV+QSVE +HP +L FLR D
Sbjct: 221 FHYYHTMVAYMRLLYQVCRLVHADLSEYNTIVHDDKLYMIDVSQSVEPEHPMSLDFLRMD 280

Query: 227 CDNVTVF 233
             NV ++
Sbjct: 281 IKNVNLY 287

Required for the final endonucleolytic cleavage at site D converting 20S pre-rRNA into the mature 18S rRNA. Has a role in the cell cycle where it is required for entrance into S-phase and in the control of the onset of anaphase. Appears to also be involved in the maintenance of chromosome stability and correct mitotic segregation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1RMT7|RIOK3_BOVIN Serine/threonine-protein kinase RIO3 OS=Bos taurus GN=RIOK3 PE=2 SV=1

 Score =  238 bits (608), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/228 (48%), Positives = 163/228 (71%), Gaps = 2/228 (0%)

Query: 8   DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGA--NYKIENL 65
           +K + +TAE+ +DP+TR++++K+++ GM+  + GCISTGKE+ V+HA  G+  + K ++ 
Sbjct: 222 EKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDGKEDSK 281

Query: 66  ELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS 125
            +  E AIK+FKT++  FK+RDKY+  +FRF+  + K NPRK++R WAEKEM NLTRM  
Sbjct: 282 VIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQR 341

Query: 126 EGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH 185
            G+  P  +LLK H+L+M+FIG D  PA KLK+  L+       Y + + +M +LY++C 
Sbjct: 342 AGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLSSEEMKDAYYQTLHLMQQLYDECT 401

Query: 186 LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           LVHADLSEYNML H   +++IDV+QSVE  HPH L+FL +DC NV+ F
Sbjct: 402 LVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQF 449

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O14730|RIOK3_HUMAN Serine/threonine-protein kinase RIO3 OS=Homo sapiens GN=RIOK3 PE=1 SV=2

 Score =  236 bits (603), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 110/228 (48%), Positives = 162/228 (71%), Gaps = 2/228 (0%)

Query: 8   DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGA--NYKIENL 65
           +K + +TAE+ +DP+TR++++K+++ GM+  + GCISTGKE+ V+HA  G+  + K ++ 
Sbjct: 222 EKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSK 281

Query: 66  ELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS 125
            +  E AIK+FKT++  FK+RDKY+  +FRF+  + K NPRK++R WAEKEM NL RM  
Sbjct: 282 VIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQR 341

Query: 126 EGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH 185
            G+  P  +LLK H+L+M+FIG D  PA KLK+  L      + Y + + +M +LY++C 
Sbjct: 342 AGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECT 401

Query: 186 LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           LVHADLSEYNML H   +++IDV+QSVE  HPH L+FL +DC NV+ F
Sbjct: 402 LVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQF 449

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8SVI7|RIO1_ENCCU Probable serine/threonine-protein kinase RIO1 homolog OS=Encephalitozoon cuniculi (strain GB-M1) GN=RIO1 PE=3 SV=1

 Score =  191 bits (484), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 191/345 (55%), Gaps = 29/345 (8%)

Query: 5   KTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVY--HASPGANYK- 61
           + KDK DRAT ++V+D RT  +L +L +RG +  + G + TGKE+NVY   AS     K 
Sbjct: 31  RKKDKSDRATVDKVLDKRTLKVLERLQARGKLVNLQGSLCTGKESNVYLGEASTSLCSKF 90

Query: 62  IENLELEKE----------FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT 111
           I+N     E            +KIFKTSI+ F+DR++Y+  E RF+  +C  N RK+++ 
Sbjct: 91  IKNRYSVTEEPGREGQIVPVVVKIFKTSIMSFRDRERYIRSEKRFQR-FCTSNSRKLIKV 149

Query: 112 WAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYR 171
           WAEKE+RNL R+ + G+  P+PI LK+++L+MT IG     A +L+D  + +   C  Y+
Sbjct: 150 WAEKEVRNLKRLNNAGIPSPEPIYLKNNILVMTQIGRCSEVAPRLRDASIKDLEGC--YQ 207

Query: 172 ECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVT 231
           +CV ++  +Y K  LVHADLSE+N+L  +  +++IDV QSVE DH +A +FL  D +N+ 
Sbjct: 208 QCVKIIRDMYKKAGLVHADLSEFNLLYFEGVVYVIDVGQSVEIDHDNAQRFLIMDINNIN 267

Query: 232 VFVILNPVS-DDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGSSNTLIYQNI 290
            F     VS      +F++   + +    +D    +D  RD  +        N    +++
Sbjct: 268 SFFSRKGVSVAKGNDLFEEISGNVIPLYLKD----IDIGRDAFIPSRVSEVGNE---EDL 320

Query: 291 VGLNADLSGPKLIPELLAQDKDDEETGESSEGDSDS--GSEEERG 333
           +   AD    +        D D   TGE+S  DSD+  G+ E RG
Sbjct: 321 LAFAADSRSREFGS---TTDSDLSSTGEASVEDSDASLGATESRG 362

Required for the final endonucleolytic cleavage at site D converting 20S pre-rRNA into the mature 18S rRNA. Has a role in the cell cycle where it is required for entrance into S-phase and in the control of the onset of anaphase. Appears to also be involved in the maintenance of chromosome stability and correct mitotic segregation.

Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P34649|YOT3_CAEEL Putative RIO-type serine/threonine-protein kinase 3 OS=Caenorhabditis elegans GN=riok-3 PE=3 SV=1

 Score =  178 bits (452), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 148/235 (62%), Gaps = 19/235 (8%)

Query: 3   RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
           +++ KDK ++AT +  +D  TR++L K I++G+   V+G I+TGKE+ V HA+  +    
Sbjct: 213 QMRNKDKEEKATMDTSVDSDTRLLLLKWINQGVFDSVDGIIATGKESAVLHAAQDS---- 268

Query: 63  ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
                   +AIK++KT++  FK+R +YV  +FRF      KNPR +++ WAE+E  NL+R
Sbjct: 269 -----ATSYAIKVYKTTLSEFKNRSEYVKDDFRF------KNPRGVLKIWAEREFMNLSR 317

Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTP---LTESGACKLYRECVVMMWR 179
           M   GL  P+P+ ++ +VL+M+F+G+ G  A +LK+      T+     +Y +   +M R
Sbjct: 318 MAKHGLPCPQPVKVRRNVLVMSFLGDQGLAAPRLKNVEWEFFTDDERRNVYDQVQSIMCR 377

Query: 180 LYNKCHLVHADLSEYNMLVHKAT-LFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           +Y +C LVHADLSE+N+L+     + +IDV+Q+++  HP +LQFL +D  N+  F
Sbjct: 378 MYKECLLVHADLSEFNLLLTPDNKVHVIDVSQAMDLSHPRSLQFLTRDIQNIITF 432

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
383862792	557	PREDICTED: serine/threonine-protein kina	0.951	0.599	0.541	1e-112
193654821	544	PREDICTED: serine/threonine-protein kina	0.960	0.619	0.553	1e-112
345486052	564	PREDICTED: serine/threonine-protein kina	0.962	0.599	0.525	1e-111
195128793	578	GI11584 [Drosophila mojavensis] gi|19392	0.968	0.588	0.538	1e-110
350408350	538	PREDICTED: serine/threonine-protein kina	0.962	0.628	0.541	1e-110
340720152	574	PREDICTED: serine/threonine-protein kina	0.962	0.588	0.543	1e-109
194869241	580	GG13901 [Drosophila erecta] gi|190654199	0.968	0.586	0.531	1e-109
195493527	584	GE20191 [Drosophila yakuba] gi|194180558	0.968	0.582	0.534	1e-108
195379672	586	GJ11263 [Drosophila virilis] gi|19415576	0.962	0.576	0.533	1e-108
380027293	554	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.957	0.606	0.531	1e-108

>gi|383862792|ref|XP_003706867.1| PREDICTED: serine/threonine-protein kinase RIO1-like [Megachile rotundata]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/401 (54%), Positives = 261/401 (65%), Gaps = 67/401 (16%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           +R++TKDKHDRAT EQV+DPRTRMILFKL+++G+++E+NGCISTGKEANVYHA+      
Sbjct: 140 ERLRTKDKHDRATVEQVLDPRTRMILFKLLNQGIIAEINGCISTGKEANVYHATSKTGV- 198

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                   EFAIKI+KTSIL FKDRDKYV GEFRFRHGYC+ NPRKMVRTWAEKE RNL 
Sbjct: 199 --------EFAIKIYKTSILQFKDRDKYVTGEFRFRHGYCRHNPRKMVRTWAEKEFRNLI 250

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           R+   G++ PKPILL+SHVLLM FIG DGWP+ KLKD  LT S   KLYRECV +MW+L+
Sbjct: 251 RLQQGGVSAPKPILLRSHVLLMDFIGTDGWPSPKLKDVVLTSSKPRKLYRECVEIMWKLF 310

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD 241
           NKC LVHADLSEYN+L H  ++ IIDV+Q+VEHDHP AL+FLRKDC N+T F   N V  
Sbjct: 311 NKCKLVHADLSEYNILYHDGSIIIIDVSQAVEHDHPMALEFLRKDCTNITEFFKKNEVG- 369

Query: 242 DDEKIFKKWDSDYVTSSDEDEEN------------------------------------- 264
               +  K   D++T     EEN                                     
Sbjct: 370 ---VMTVKALFDFITDPTVTEENMDKYLDAISEQMAQQNDQEVDPNQQIEEQVFKQAYIP 426

Query: 265 -----VVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQ-DKD------ 312
                V+D ERDI L KSG+     LIY+ +VGL ADLS P   PE+L + DKD      
Sbjct: 427 QNLTQVIDIERDIKLAKSGKED---LIYKTLVGLKADLSKPICTPEILTKVDKDTSDVEA 483

Query: 313 DEETGESSEGDSDSGSEE--ERGSKFVNSARPRDETAESKK 351
           +  + ES   D D  SEE  E  +KF+NSARPR+E+ ESKK
Sbjct: 484 NNSSDESDHSDEDEDSEEGNENETKFINSARPRNESPESKK 524

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193654821|ref|XP_001950641.1| PREDICTED: serine/threonine-protein kinase RIO1-like [Acyrthosiphon pisum]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/385 (55%), Positives = 268/385 (69%), Gaps = 48/385 (12%)

Query: 3   RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
           R + KDK DRATAEQVMDPRTRMILFKL++RGM+ +++GCISTGKEANVYH++       
Sbjct: 137 RFRNKDKCDRATAEQVMDPRTRMILFKLLNRGMIGQIDGCISTGKEANVYHST------- 189

Query: 63  ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
            + + EK +AIK+FKTSILVFKDRD+YV GEFRFRHGYC+ NPRKMVR WAEKEMRNL R
Sbjct: 190 -STDSEKHYAIKVFKTSILVFKDRDRYVTGEFRFRHGYCRHNPRKMVRLWAEKEMRNLAR 248

Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN 182
           MY+ GL VP+PILL+SHVL+M+FIG+DGWPA KLKD  LT S AC+LYR+C+++MW+LYN
Sbjct: 249 MYAAGLPVPQPILLRSHVLMMSFIGKDGWPAPKLKDARLTTSKACQLYRDCLIIMWKLYN 308

Query: 183 KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS-- 240
            C LVHADLSE+N+L +   + +IDV+Q+VEH+HP+AL+FLRKDC N+T F   + V   
Sbjct: 309 ICKLVHADLSEFNLLYNDGEIVMIDVSQAVEHEHPYALEFLRKDCTNITEFFRHHDVGTL 368

Query: 241 ----------------DDDEKIFKKWDSDYVTSSDEDEE------------------NVV 266
                           D+ E    +   + V S     E                   VV
Sbjct: 369 TIKCLFDFLTDPTITLDNMETCLDRLQVNMVNSDPLTNEEMVDQEVFKNAYIPKNLNEVV 428

Query: 267 DFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKDDEETGESSEGDSDS 326
           DFERDI+L+KSGQ   + LIYQ IVGL  DLSGP+  P +L  D  D+    +SE +S  
Sbjct: 429 DFERDISLVKSGQTGED-LIYQKIVGLKDDLSGPQNTPAILEDDDSDDSNSSTSEKES-I 486

Query: 327 GSEEERGSKFVNSARPRDETAESKK 351
           GS+E+  SKF NSARP++E AESK+
Sbjct: 487 GSDEK--SKFFNSARPKNEDAESKR 509

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486052|ref|XP_001606139.2| PREDICTED: serine/threonine-protein kinase RIO1-like [Nasonia vitripennis]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/411 (52%), Positives = 266/411 (64%), Gaps = 73/411 (17%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           DR++ KDK DRATAEQVMDPRTR+ILFK++++G++ E+NGCISTGKEANVYHA       
Sbjct: 133 DRMRVKDKSDRATAEQVMDPRTRIILFKMLNKGIIDEINGCISTGKEANVYHARSKTGI- 191

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                   EFAIKI+KTSILVFKDRDKYV GEFRFRHGYC+ NPRKMVRTWAEKEMRNL 
Sbjct: 192 --------EFAIKIYKTSILVFKDRDKYVTGEFRFRHGYCRSNPRKMVRTWAEKEMRNLN 243

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           R+   G+  PK I+LKSHVLLM FIG  GWP+ KLKD  L  S   KLYRECVV+MW+LY
Sbjct: 244 RLQQGGIKAPKAIMLKSHVLLMDFIGVKGWPSPKLKDALLVSSQPRKLYRECVVIMWKLY 303

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS- 240
           NKC LVHADLSEYN+L H+ +L IIDV+QSVE DHP A +FLRKDC N+T F   N V+ 
Sbjct: 304 NKCKLVHADLSEYNILYHEESLVIIDVSQSVEQDHPMAFEFLRKDCTNITDFFKKNKVAV 363

Query: 241 ---------DDDEKIFKKWDSDYV---------TSSDEDEEN------------------ 264
                      D  + +K   +Y+          S+D D E                   
Sbjct: 364 MSVKDLFDFITDPTVNEKNIDEYLDKMSKMMENKSTDIDPEQQIEEEVFKNAYIPQRLTE 423

Query: 265 VVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQ--------------- 309
           V+D ERDI + K+G+G    L+Y+ +VGL +DLS P L+PE+L++               
Sbjct: 424 VIDIERDIRIAKAGKGD---LVYKTLVGLKSDLSKPALVPEILSKKDKGTKTLGKKEKSS 480

Query: 310 DKDDEETGESSEGDSDSGSEE---------ERGSKFVNSARPRDETAESKK 351
           D  DEE+ E S+G S  G++E         E+ SKF+NSARP+ ETAE +K
Sbjct: 481 DSHDEESDEESDGSSYEGTDEEDSEDESGSEKESKFINSARPKHETAEERK 531

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195128793|ref|XP_002008846.1| GI11584 [Drosophila mojavensis] gi|193920455|gb|EDW19322.1| GI11584 [Drosophila mojavensis]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/388 (53%), Positives = 260/388 (67%), Gaps = 48/388 (12%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           +R++ +DKHDRATAEQVMDPRTRMILFKL++RG++ E+NGCISTGKEANVYHA       
Sbjct: 167 ERVRVRDKHDRATAEQVMDPRTRMILFKLLNRGLIQEINGCISTGKEANVYHAVSKNG-- 224

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                 E E+AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMVRTWAEKEMRN  
Sbjct: 225 ------EDEYAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKHNPRKMVRTWAEKEMRNYL 278

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           RM + G+ VP+PILL+SHVL+M F G DGWPA KLKD  L+ S A +LYR+CVV+MWR+Y
Sbjct: 279 RMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWRIY 338

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV------- 234
           N+C LVHADLSE+N+L     L IIDV+Q+VEHDHPHA  FLRKDC N++ F        
Sbjct: 339 NQCRLVHADLSEFNILFQDGQLVIIDVSQAVEHDHPHAFDFLRKDCTNISEFFRKKAVAT 398

Query: 235 -----ILNPVSDDD----------EKI---FKKWDSDYVTSSDEDEE------------- 263
                + + ++D            E+I    K  D D +T+ ++ +E             
Sbjct: 399 MTVKELFDFITDQTINEQNMEECLERISERIKDRDFDAITAQEKIDEAVWQNTYIPKRLD 458

Query: 264 NVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKDDEETGESSEGD 323
            V  FERD+   K+ QG    L+Y  I GLN+ L   K    L A++K  E   +SSE +
Sbjct: 459 EVPHFERDV--AKAKQGVQQDLVYAKITGLNSTLDVQKKPDILDAENKTAENEQQSSENE 516

Query: 324 SDSGSEEERGSKFVNSARPRDETAESKK 351
           SD   +E+  SKF NSARPRDE+ +SKK
Sbjct: 517 SDDSQDEDETSKFKNSARPRDESPDSKK 544

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408350|ref|XP_003488374.1| PREDICTED: serine/threonine-protein kinase RIO1-like [Bombus impatiens]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/399 (54%), Positives = 265/399 (66%), Gaps = 61/399 (15%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           DR +TKDKHDRAT EQV+DPRTRMILFKL++RG+++E+NGCISTGKEANVYHA+      
Sbjct: 119 DRFRTKDKHDRATVEQVLDPRTRMILFKLLNRGIIAEINGCISTGKEANVYHATSKTGV- 177

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                   E AIKI+KTSIL FKDRDKYV GEFRFRHGYC+ NPRKMVRTWAEKE+RNLT
Sbjct: 178 --------EVAIKIYKTSILQFKDRDKYVTGEFRFRHGYCRHNPRKMVRTWAEKEIRNLT 229

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           R+    +N PKPILL SHVLLM FIG +GWP+ KLKD  LT S   KLYRECV  MWRLY
Sbjct: 230 RLRQGEVNAPKPILLCSHVLLMGFIGTNGWPSPKLKDVVLTASKPRKLYRECVETMWRLY 289

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPV-- 239
           NKC LVHADLSEYNML H  ++ IIDV+Q+VEHDHP AL+FLRKDC N+T F   N V  
Sbjct: 290 NKCKLVHADLSEYNMLYHDGSIVIIDVSQAVEHDHPMALEFLRKDCTNITEFFKKNDVGV 349

Query: 240 -------------SDDDEKIFKKWD--SDYVTSSDEDEEN-------------------- 264
                        +  +E + K  D  S+ +T  +E +++                    
Sbjct: 350 MPVKTLFDFITDPTITEENMDKYLDAISEQMTQQEEQDDDPKQQIEEQVFKQAYIPQNLS 409

Query: 265 -VVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQD--------KDDEE 315
            V+D ERDINL KSG+     LIY+ +VGL +DLS P   PE+L++D        + D+ 
Sbjct: 410 QVIDIERDINLAKSGKED---LIYKTLVGLKSDLSKPINTPEILSKDLKKTNNMEEKDDL 466

Query: 316 TGESSEGDSDSGSEE---ERGSKFVNSARPRDETAESKK 351
           +G+  + +++   EE   E   KFVNSARPR E+ +SKK
Sbjct: 467 SGDIDDSENEISEEEDVMENEIKFVNSARPRHESPDSKK 505

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720152|ref|XP_003398507.1| PREDICTED: serine/threonine-protein kinase RIO1-like [Bombus terrestris]

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/399 (54%), Positives = 264/399 (66%), Gaps = 61/399 (15%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           DR +TKDKHDRAT EQV+DPRTRMILFKL+++G+++E+NGCISTGKEANVYHA+      
Sbjct: 155 DRFRTKDKHDRATVEQVLDPRTRMILFKLLNQGIIAEINGCISTGKEANVYHATSKTGV- 213

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                   EFAIKI+KTSIL FKDRDKYV GEFRFRHGYC++NPRKMVRTWAEKE RNL 
Sbjct: 214 --------EFAIKIYKTSILQFKDRDKYVTGEFRFRHGYCRRNPRKMVRTWAEKEFRNLI 265

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           R++   +N PKPILL+SHVLLM FIG +GWP+ KLKD  LT S   KLYRECV  MWRLY
Sbjct: 266 RLHQGEVNAPKPILLRSHVLLMDFIGTNGWPSPKLKDVVLTASKPRKLYRECVETMWRLY 325

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPV-- 239
           NKC LVHADLSEYNML H  T+ IIDV+Q+VEHDHP AL+FLRKDC N+T F   N V  
Sbjct: 326 NKCKLVHADLSEYNMLYHDGTIIIIDVSQAVEHDHPMALEFLRKDCTNITEFFKKNDVGV 385

Query: 240 -------------SDDDEKIFKKWD--SDYVTSSDEDEEN-------------------- 264
                        +  +E + K  D  S+ +T  +E +++                    
Sbjct: 386 MSVKTLFDFITDPTITEENMDKYLDIISEQMTQQEEQDDDPKQQIEEQVFKQAYIPQNLS 445

Query: 265 -VVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQD---------KDD- 313
            V+D ERDI+L KSG+     LIY+ +VGL +DLS P   PE+L++D         KDD 
Sbjct: 446 QVIDIERDISLAKSGKED---LIYKTLVGLKSDLSKPINTPEILSKDLKKTNNMEEKDDL 502

Query: 314 -EETGESSEGDSDSGSEEERGSKFVNSARPRDETAESKK 351
            E+  +S    S+     E   KFVNSARPR E+ +SKK
Sbjct: 503 SEDIDDSENESSEEEDVTENEPKFVNSARPRHESPDSKK 541

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194869241|ref|XP_001972416.1| GG13901 [Drosophila erecta] gi|190654199|gb|EDV51442.1| GG13901 [Drosophila erecta]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/393 (53%), Positives = 260/393 (66%), Gaps = 53/393 (13%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           DR + +DKHDRATAEQVMDPRTRMILFKL++RGM+ E+NGCISTGKEANVYHA       
Sbjct: 164 DRTQVRDKHDRATAEQVMDPRTRMILFKLLNRGMIQEINGCISTGKEANVYHAVSKNG-- 221

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                 E+EFAIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMVRTWAEKEMRN  
Sbjct: 222 ------EEEFAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKHNPRKMVRTWAEKEMRNYL 275

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           RM + G+ VP+PILL+SHVL+M F G DGWPA KLKD  L+ S A +LYR+CVV+MWR+Y
Sbjct: 276 RMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWRIY 335

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV------- 234
           N+C LVHADLSE+N+L+    L IIDV+QSVEHDHPH+  FLRKDC N++ F        
Sbjct: 336 NQCRLVHADLSEFNILLQDGQLVIIDVSQSVEHDHPHSFDFLRKDCTNISEFFRKRAVAT 395

Query: 235 -----ILNPVSDDD----------EKI---FKKWDSDYVTSSDEDEE------------- 263
                + + ++D            E+I    K  D D +++ ++ +E             
Sbjct: 396 MTVKELFDFITDQTITTENMEECLERISERIKDRDFDAISAQEKIDEAVWQNTYIPKRLD 455

Query: 264 NVVDFERDINLIKSGQGSSNTLIYQNIVGLNADL---SGPKLIPELLAQDKDDEE--TGE 318
            V  FERD+   K+ QG    LIY  I GL +DL     P ++    A+++D  E  T  
Sbjct: 456 EVRHFERDV--AKAKQGVQQNLIYGKITGLTSDLDVQQKPDVLQSSTAKEEDGSEAQTSG 513

Query: 319 SSEGDSDSGSEEERGSKFVNSARPRDETAESKK 351
           S +GDS     +E   +F NSARPR+E+ ESKK
Sbjct: 514 SEDGDSQENDNDEEARRFRNSARPREESPESKK 546

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195493527|ref|XP_002094457.1| GE20191 [Drosophila yakuba] gi|194180558|gb|EDW94169.1| GE20191 [Drosophila yakuba]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/393 (53%), Positives = 258/393 (65%), Gaps = 53/393 (13%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           DR + +DKHDRATAEQVMDPRTRMILFKL++RGM+ E+NGCISTGKEANVYHA       
Sbjct: 168 DRTQVRDKHDRATAEQVMDPRTRMILFKLLNRGMIQEINGCISTGKEANVYHAVSKNG-- 225

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                 E+EFAIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMVRTWAEKEMRN  
Sbjct: 226 ------EEEFAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKHNPRKMVRTWAEKEMRNYL 279

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           RM + G+ VP+PILL+SHVL+M F G DGWPA KLKD  LT S A +LYR+CVV+MWR+Y
Sbjct: 280 RMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKDVELTTSKARELYRDCVVLMWRIY 339

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV------- 234
           N+C LVHADLSE+N+LV    L IIDV+QSVEHDHPH+  FLRKDC N++ F        
Sbjct: 340 NQCRLVHADLSEFNILVQDGQLVIIDVSQSVEHDHPHSFDFLRKDCTNISEFFRKRAVAT 399

Query: 235 -----ILNPVSDDD----------EKI---FKKWDSDYVTSSDEDEE------------- 263
                + + ++D            E+I    K  D D +++ ++ +E             
Sbjct: 400 MTVKELFDFITDQTITTENMEECLERISERIKDRDFDAISAQEKIDEAVWQNTYIPKRLD 459

Query: 264 NVVDFERDINLIKSGQGSSNTLIYQNIVGLNADL---SGPKLIPELLAQDKDDEE--TGE 318
            V  FE+D+   K+ QG    LIY  I GL +DL     P ++    A ++D  E  T  
Sbjct: 460 EVRHFEKDV--AKAKQGVQQNLIYGKITGLTSDLDVQQKPDVLQSAAANEEDGSEAQTSG 517

Query: 319 SSEGDSDSGSEEERGSKFVNSARPRDETAESKK 351
           S + DS     +E   KF NSARPR+E+ ESKK
Sbjct: 518 SEDEDSQENDNDEDARKFKNSARPREESPESKK 550

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195379672|ref|XP_002048602.1| GJ11263 [Drosophila virilis] gi|194155760|gb|EDW70944.1| GJ11263 [Drosophila virilis]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/390 (53%), Positives = 260/390 (66%), Gaps = 52/390 (13%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHA--SPGAN 59
           +R++ +DKHDRATAEQVMDPRTRMILFKL++RG++ E+NGCISTGKEANVYHA    GA+
Sbjct: 175 ERVRVRDKHDRATAEQVMDPRTRMILFKLLNRGLIQEINGCISTGKEANVYHAVSKNGAD 234

Query: 60  YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
                     E+AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMVRTWAEKEMRN
Sbjct: 235 ----------EYAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKHNPRKMVRTWAEKEMRN 284

Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
             RM + G+ VP+PILL+SHVL+M F G DGWPA KLKD  L+ S A +LYR+CVV+MWR
Sbjct: 285 YLRMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWR 344

Query: 180 LYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV----- 234
           +YN+C LVHADLSE+N+L     L IIDV+Q+VEHDHPHA  FLRKDC N++ F      
Sbjct: 345 IYNQCRLVHADLSEFNILFQDGQLVIIDVSQAVEHDHPHAFDFLRKDCTNISEFFRKKSV 404

Query: 235 -------ILNPVSDDD----------EKI---FKKWDSDYVTSSDEDEE----------- 263
                  + + ++D            E+I    K  D D +T+ ++ +E           
Sbjct: 405 ATMTVKELFDFITDQTINEQNMEECLERISERIKDRDFDAITAQEKIDEAVWQNTYIPKR 464

Query: 264 --NVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKDDEETGESSE 321
              V  FERD+   K+ QG    L+Y  I GL   L   K    L A+ K  E   ++SE
Sbjct: 465 LDEVPHFERDV--TKAKQGVQQNLVYAKITGLTPQLDVQKQPDILDAEHKSAESEQQTSE 522

Query: 322 GDSDSGSEEERGSKFVNSARPRDETAESKK 351
            +SD+  E++  SKF NSARPRDE+ +SKK
Sbjct: 523 NESDASQEDDDMSKFKNSARPRDESPDSKK 552

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027293|ref|XP_003697362.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO1-like [Apis florea]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/397 (53%), Positives = 261/397 (65%), Gaps = 61/397 (15%)

Query: 2   DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
           DR +TKDKHDRAT EQV+DPRTRMILFKL+++G+++E+NGCISTGKEANVYHA       
Sbjct: 139 DRFRTKDKHDRATVEQVLDPRTRMILFKLLNQGIIAEINGCISTGKEANVYHAISKTGI- 197

Query: 62  IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                   EFAIKI+KTSIL FKDRDKYV GEFRFRHGYC+ NPRKMVRTWAE E RNL 
Sbjct: 198 --------EFAIKIYKTSILHFKDRDKYVTGEFRFRHGYCRHNPRKMVRTWAEXEFRNLI 249

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           R+    +N PKPILL+SHVLLM FIG +GWP++KLKD  LT S   KLYREC+ +MW+LY
Sbjct: 250 RLQQGDVNAPKPILLRSHVLLMDFIGTNGWPSSKLKDVVLTASKLRKLYRECIEIMWKLY 309

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF-------- 233
           NKC LVHADLSEYNML H  ++ IIDV+Q+VEHDHP AL+FLRKDC N+T F        
Sbjct: 310 NKCKLVHADLSEYNMLYHDGSIIIIDVSQAVEHDHPMALEFLRKDCTNITEFFKKNEVAV 369

Query: 234 ----VILNPVSD---DDEKIFKKWD--SDYVTSSD---------------------EDEE 263
                + N ++D    +E + K  D  S+ +T                        ++  
Sbjct: 370 MTVKTLFNFITDPTITEENMDKCLDIISEQITQQSDQCIDPEQQIEEQVFKQIYIPQNLS 429

Query: 264 NVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELL---------AQDKDDE 314
            V+D ERDI L K+G+G    LIY+ +VGL +DLS P   PE+L          ++KD+ 
Sbjct: 430 QVIDIERDIKLAKTGKGD---LIYKTLVGLKSDLSEPIDTPEILNERSKKLNNIEEKDNL 486

Query: 315 ETGESSEGDSDSGSEEERGSKFVNSARPRDETAESKK 351
               S+  DS+   + E  SKFVNSARPR E+ +SKK
Sbjct: 487 SEKSSNSEDSEKNIQNE--SKFVNSARPRYESPDSKK 521

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
FB|FBgn0036187	585	CG11660 [Drosophila melanogast	0.794	0.476	0.604	5.9e-89
ZFIN|ZDB-GENE-040426-1927	552	riok1 "RIO kinase 1 (yeast)" [	0.635	0.403	0.646	6.5e-83
UNIPROTKB|E1B887	568	RIOK1 "Serine/threonine-protei	0.715	0.441	0.593	1.1e-82
UNIPROTKB|E1BWH5	569	RIOK1 "Serine/threonine-protei	0.720	0.444	0.574	3.2e-81
UNIPROTKB|G3V7T0	566	Riok1 "Serine/threonine-protei	0.646	0.401	0.610	4.1e-79
WB|WBGene00019698	506	riok-1 [Caenorhabditis elegans	0.629	0.436	0.623	2.2e-78
POMBASE|SPAC10F6.10	497	SPAC10F6.10 "protein kinase, R	0.635	0.448	0.626	4.6e-78
UNIPROTKB|E2RP92	569	RIOK1 "Serine/threonine-protei	0.655	0.404	0.635	4.3e-77
UNIPROTKB|Q9BRS2	568	RIOK1 "Serine/threonine-protei	0.655	0.404	0.631	1.5e-76
DICTYBASE|DDB_G0280431	574	rio1 "RIO1 subfamily protein k	0.831	0.508	0.496	1.7e-75

FB|FBgn0036187 CG11660 [Drosophila melanogaster (taxid:7227)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 177/293 (60%), Positives = 217/293 (74%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             DR + +DKHDRATAEQVMDPRTRMILFKL++RGM+ E+NGCISTGKEANVYHA       
Sbjct:   168 DRTQVRDKHDRATAEQVMDPRTRMILFKLLNRGMIQEINGCISTGKEANVYHAVSKNG-- 225

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                   E+EFAIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMVRTWAEKEMRN  
Sbjct:   226 ------EEEFAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKHNPRKMVRTWAEKEMRNYL 279

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
             RM + G+ VP+PILL+SHVL+M F G DGWPA KLKD  L+ S A +LYR+CVV+MWR+Y
Sbjct:   280 RMRNAGVPVPEPILLRSHVLVMRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWRIY 339

Query:   182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD 241
             N+C LVHADLSE+N+L+    L IIDV+QSVEHDHPH+  FLRKDC N++ F     V+ 
Sbjct:   340 NQCRLVHADLSEFNILLQDGQLVIIDVSQSVEHDHPHSFDFLRKDCTNISEFFRKRAVAT 399

Query:   242 DDEK-IFKKWDSDYVTSSDEDE--ENVVDF--ERDINLIKSGQGSSNTLIYQN 289
                K +F       +T+ + +E  E + +   +RD + I S Q   +  ++QN
Sbjct:   400 MTVKELFDFITDQTITTENMEECLERISERIKDRDFDAI-SAQEKIDEAVWQN 451

GO:0004672 "protein kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-040426-1927 riok1 "RIO kinase 1 (yeast)" [Danio rerio (taxid:7955)]

 Score = 764 (274.0 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
 Identities = 150/232 (64%), Positives = 181/232 (78%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             D  + KDK DRAT EQV+DPRTRMILFK++SRG+ S++NGCISTGKEANVYHA+     K
Sbjct:   141 DTFRVKDKSDRATVEQVLDPRTRMILFKMLSRGVFSQINGCISTGKEANVYHATTA---K 197

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
              E+       AIKI+KTSIL+FKDRDKYV+GEFRFRHGYCK NPRKMVRTWAEKEMRNL 
Sbjct:   198 GESR------AIKIYKTSILLFKDRDKYVSGEFRFRHGYCKGNPRKMVRTWAEKEMRNLI 251

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
             R+ +  +  P+PI+L+SHVL+M+FIG D  PA  LK+  L+ES A +LY + +  M  +Y
Sbjct:   252 RLQTAQIPSPEPIMLRSHVLVMSFIGRDDTPAPLLKNAVLSESKARELYLQIIQNMRIMY 311

Query:   182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
             ++  LVHADLSEYNML H    +IIDV+QSVEHDHPHAL+FLRKDC NV  F
Sbjct:   312 SEARLVHADLSEYNMLYHNGEAYIIDVSQSVEHDHPHALEFLRKDCSNVNDF 363

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|E1B887 RIOK1 "Serine/threonine-protein kinase RIO1" [Bos taurus (taxid:9913)]

 Score = 771 (276.5 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
 Identities = 155/261 (59%), Positives = 195/261 (74%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             D  + KDK DRAT EQV+DPRTRMILFK+++RG+++E+NGCISTGKEANVYHA      +
Sbjct:   145 DMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIIAEINGCISTGKEANVYHA------R 198

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
               N E     AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMV+TWAEKEMRNL 
Sbjct:   199 TANGESR---AIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLI 255

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
             R+ +  +  P+PILL+SHVL+M+FIG+D  PA  LK+  L+ES A +LY + +  M R+Y
Sbjct:   256 RLNTAEIPCPEPILLRSHVLVMSFIGKDDMPAPLLKNVQLSESKARELYMQVIEYMRRMY 315

Query:   182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD 241
                 LVHADLSE+NML H   ++IIDV+QSVEHDHPHAL+FLRKDC NV  F + + V+ 
Sbjct:   316 QDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFLKHGVAV 375

Query:   242 DD-EKIFKKWDSDYVTSSDED 261
                 ++F+      +TS + D
Sbjct:   376 MTVRELFEFVTDPSITSENMD 396

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E1BWH5 RIOK1 "Serine/threonine-protein kinase RIO1" [Gallus gallus (taxid:9031)]

 Score = 757 (271.5 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
 Identities = 154/268 (57%), Positives = 194/268 (72%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             D  + KDK DRAT EQV+DPRTRMILFK++SRG++SE+NGCISTGKEANVYHAS  AN  
Sbjct:   148 DMCRVKDKSDRATVEQVLDPRTRMILFKMLSRGVISEINGCISTGKEANVYHAST-ANGD 206

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                       AIKI+KTSIL+FKDRDKYV+GEFRFRHGYCK NPRKMV+TWAEKEMRNL 
Sbjct:   207 SR--------AIKIYKTSILMFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLI 258

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
             R+ +  +  P+PI+L+SHVLLM FIG+   PA  LK+  L++S   +LY + +  M R+Y
Sbjct:   259 RLNTAQIPCPEPIMLRSHVLLMGFIGKGDRPAPLLKNAQLSDSKVRELYLQIIQYMRRMY 318

Query:   182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD 241
                 LVHADLSE+NML H   ++IIDV+Q+VEHDHPHAL+FLRKDC NV  F   + V+ 
Sbjct:   319 QDARLVHADLSEFNMLYHSGDVYIIDVSQAVEHDHPHALEFLRKDCANVNGFFQKHNVAV 378

Query:   242 DD-EKIFKKWDSDYVTSSDEDEENVVDF 268
                 ++F     +++T      EN+ D+
Sbjct:   379 MTVRELF-----EFITDPSITSENIDDY 401

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|G3V7T0 Riok1 "Serine/threonine-protein kinase RIO1" [Rattus norvegicus (taxid:10116)]

 Score = 731 (262.4 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
 Identities = 144/236 (61%), Positives = 179/236 (75%)

Query:     5 KTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIEN 64
             + KDK DRAT EQV+DPRTRMILFKL+ +  +SE++GCISTGKEANVY+AS  +      
Sbjct:   146 RIKDKADRATVEQVLDPRTRMILFKLLHKEHISEIHGCISTGKEANVYYASTPSG----- 200

Query:    65 LELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMY 124
                 +  AIKI+KTSIL+FKDRDKYV GEFRFR GYCK NPRKMV+TWAEKEMRNL+R+ 
Sbjct:   201 ----ESRAIKIYKTSILMFKDRDKYVTGEFRFRRGYCKGNPRKMVKTWAEKEMRNLSRLR 256

Query:   125 SEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC 184
             +  +  P+PI L+SHVLLM+FIG+D  PA  LK+  L+ES A +LY + +  M ++Y   
Sbjct:   257 TANIPCPEPIRLRSHVLLMSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRKMYQDA 316

Query:   185 HLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
              LVHADLSE+NML H   ++IIDV+QSVEHDHPHAL+FLRKDC NV  F   + V+
Sbjct:   317 RLVHADLSEFNMLYHGGDVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFFKHAVA 372

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

WB|WBGene00019698 riok-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 745 (267.3 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
 Identities = 144/231 (62%), Positives = 175/231 (75%)

Query:     3 RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
             R + KD+ DRAT EQV+DPRTR++LF+L+ RG +  ++GCISTGKEANVYHA+ G     
Sbjct:   108 RKRVKDRADRATVEQVLDPRTRLVLFRLLQRGTLLNIDGCISTGKEANVYHAT-GT---- 162

Query:    63 ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
                  + + AIKI+KTSIL FKDR++YV GEFR+RHGYCK NPRKMV  WAEKEMRNL R
Sbjct:   163 -----DNDLAIKIYKTSILTFKDRERYVTGEFRYRHGYCKSNPRKMVAVWAEKEMRNLAR 217

Query:   123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN 182
             M+  GL VPKP LLK HVL+M F+G+DGWPA  LK+  L++  A  +Y   V  M RLY 
Sbjct:   218 MHEVGLPVPKPHLLKGHVLVMDFLGKDGWPAPLLKNANLSQEDAEPMYVGLVRDMRRLYR 277

Query:   183 KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
             +C LVHADLSE+NMLVH   L+IIDV+QSVE DHPHAL+FLR DC+NV  F
Sbjct:   278 ECKLVHADLSEFNMLVHDGKLWIIDVSQSVEQDHPHALEFLRMDCNNVNKF 328

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0019915 "lipid storage" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

POMBASE|SPAC10F6.10 SPAC10F6.10 "protein kinase, RIO family (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 737 (264.5 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
 Identities = 146/233 (62%), Positives = 177/233 (75%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             D+   KDK DRAT+EQV+DPRTRMIL KLI+ G +SE+NGCISTGKEANVYHA+   N  
Sbjct:    85 DKSSIKDKSDRATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHAT---N-- 139

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                 E  K FAIKI+KTSILVFKDRD+YV+GEFRFRHGY K+NPRKMVR WAEKE+RNL 
Sbjct:   140 ----EDGKHFAIKIYKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRLWAEKEIRNLK 195

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGED-GWPAAKLKDTPLTESGACKLYRECVVMMWRL 180
             R+ + G+  P+PILLK HVLLM+F+G+  GW   KLKD  +T   A KLY+     M  L
Sbjct:   196 RVAAAGIPCPEPILLKQHVLLMSFLGDKKGWAYPKLKDIDMTPGEATKLYQLVARNMRIL 255

Query:   181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
             ++ CHLVHADLSEYN+L HK  ++ IDV+QSVEHDHP ++ FLR D  N++ F
Sbjct:   256 FHVCHLVHADLSEYNLLYHKGKVYFIDVSQSVEHDHPQSIDFLRMDILNISTF 308

GO:0000070 "mitotic sister chromatid segregation" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0007346 "regulation of mitotic cell cycle" evidence=ISO

UNIPROTKB|E2RP92 RIOK1 "Serine/threonine-protein kinase RIO1" [Canis lupus familiaris (taxid:9615)]

 Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
 Identities = 152/239 (63%), Positives = 186/239 (77%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             D  + KDK DRAT EQV+DPRTRMILFK+++RG++SE+NGCISTGKEANVYHAS  AN +
Sbjct:   146 DMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIISEINGCISTGKEANVYHAST-ANGE 204

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                       AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMV+TWAEKEMRNL 
Sbjct:   205 SR--------AIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLI 256

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
             R+ +  +  P+PILL+SHVL+M FIG+D  PA  LK+  L+ES A +LY + +  M R+Y
Sbjct:   257 RLNTAQIPCPEPILLRSHVLVMGFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMY 316

Query:   182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
                 LVHADLSE+NML H   ++IIDV+QSVEHDHPHAL+FLRKDC N+  F + + V+
Sbjct:   317 QDARLVHADLSEFNMLYHSGDVYIIDVSQSVEHDHPHALEFLRKDCANINDFFLKHSVA 375

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q9BRS2 RIOK1 "Serine/threonine-protein kinase RIO1" [Homo sapiens (taxid:9606)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 151/239 (63%), Positives = 187/239 (78%)

Query:     2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
             D  + KDK DRAT EQV+DPRTRMILFK+++RG+++E+NGCISTGKEANVYHAS  AN +
Sbjct:   145 DMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHAST-ANGE 203

Query:    62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                       AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMV+TWAEKEMRNL 
Sbjct:   204 SR--------AIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLI 255

Query:   122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
             R+ +  +  P+PI+L+SHVL+M+FIG+D  PA  LK+  L+ES A +LY + +  M R+Y
Sbjct:   256 RLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMY 315

Query:   182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
                 LVHADLSE+NML H   ++IIDV+QSVEHDHPHAL+FLRKDC NV  F + + V+
Sbjct:   316 QDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFMRHSVA 374

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

DICTYBASE|DDB_G0280431 rio1 "RIO1 subfamily protein kinase" [Dictyostelium discoideum (taxid:44689)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 154/310 (49%), Positives = 216/310 (69%)

Query:     4 IKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHA-SPGANYKI 62
             ++  DK DRAT EQV+DPRTR++LFK+I++G  SE+NGCISTGKEANVYHA +P      
Sbjct:   150 VRIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCISTGKEANVYHAFTPN----- 204

Query:    63 ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
                  E+E A+K++KTSILVFKDRD+YV GEFRFR GY K NPRKMV+ WAEKE RNLTR
Sbjct:   205 -----EEERAVKVYKTSILVFKDRDRYVTGEFRFRRGYSKHNPRKMVKVWAEKEFRNLTR 259

Query:   123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN 182
             + + G+  P P++L++H+L+MTFIG+DG+ A +LKD  +++     +Y +C+ MM  L++
Sbjct:   260 LKNAGIPCPTPLILRNHILVMTFIGKDGYAAPRLKDATVSQEKFGVIYLDCIKMMRTLFH 319

Query:   183 KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDD 242
             KC LVHADLSEYNML +K  L+IIDV+QSVEHDHPH+L FLR DC NVT F     V+  
Sbjct:   320 KCRLVHADLSEYNMLYYKNQLYIIDVSQSVEHDHPHSLDFLRMDCSNVTDFFRKKEVNT- 378

Query:   243 DEKIFKKWDSDYVTSSDEDEENVVDF-ERDINLIKSGQGSSNTLIYQNIVGLNADLSGPK 301
                +F +   +++T     E+N+  + E+ +  I+S   +++    Q  V  NA +  P+
Sbjct:   379 ---MFIQELFEFITDLTITEDNIDQYLEKMLEKIQSRGETTDEQKIQEEVFRNAYI--PR 433

Query:   302 LIPELLAQDK 311
              + +++  D+
Sbjct:   434 TLDQIIDLDR 443

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0004672 "protein kinase activity" evidence=ISS

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q12196	RIO1_YEAST	2, ., 7, ., 1, 1, ., 1	0.5060	0.6581	0.4772	yes	N/A
O42650	RIO1_SCHPO	2, ., 7, ., 1, 1, ., 1	0.4521	0.9002	0.6358	yes	N/A
Q8SVI7	RIO1_ENCCU	2, ., 7, ., 1, 1, ., 1	0.3594	0.9002	0.7726	yes	N/A
O28471	RIO1_ARCFU	2, ., 7, ., 1, 1, ., 1	0.3694	0.6780	0.9224	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	351
cd05147	190	cd05147, RIO1_euk, RIO kinase family; eukaryotic R	1e-124
cd05145	190	cd05145, RIO1_like, RIO kinase family; RIO1, RIO3	1e-110
smart00090	237	smart00090, RIO, RIO-like kinase	3e-99
COG1718	268	COG1718, RIO1, Serine/threonine protein kinase inv	4e-91
cd05119	187	cd05119, RIO, RIO kinase family, catalytic domain	1e-90
pfam01163	186	pfam01163, RIO1, RIO1 family	3e-82
cd05146	197	cd05146, RIO3_euk, RIO kinase family; eukaryotic R	2e-79
cd05144	198	cd05144, RIO2_C, RIO kinase family; RIO2, C-termin	1e-24
COG0478	304	COG0478, COG0478, RIO-like serine/threonine protei	4e-23
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	2e-05
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	4e-05

>gnl|CDD|240170 cd05147, RIO1_euk, RIO kinase family; eukaryotic RIO1, catalytic domain

 Score =  355 bits (912), Expect = e-124
 Identities = 131/195 (67%), Positives = 153/195 (78%), Gaps = 9/195 (4%)

Query: 39  VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRH 98
           +NGCISTGKEANVYHA+             +E AIKI+KTSILVFKDRD+YV+GEFRFRH
Sbjct: 1   INGCISTGKEANVYHATTAN---------GEERAIKIYKTSILVFKDRDRYVSGEFRFRH 51

Query: 99  GYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD 158
           GYCK NPRKMVRTWAEKEMRNL R+ + G+  P+PILLKSHVL+M FIG+DGW A +LKD
Sbjct: 52  GYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKD 111

Query: 159 TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPH 218
            PL+ES A +LY + + +M  LY  C LVHADLSEYN+L H   L+IIDV+QSVEHDHPH
Sbjct: 112 APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHDGKLYIIDVSQSVEHDHPH 171

Query: 219 ALQFLRKDCDNVTVF 233
           AL+FLR DC NV  F
Sbjct: 172 ALEFLRMDCVNVNDF 186

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and chromosome maintenance. The biological substrates for RIO1 are unknown. Length = 190

>gnl|CDD|240168 cd05145, RIO1_like, RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

 Score =  319 bits (820), Expect = e-110
 Identities = 113/195 (57%), Positives = 138/195 (70%), Gaps = 9/195 (4%)

Query: 39  VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRH 98
           +NGCISTGKEANVYHA  G           +E A+KI+KTS L FKDRDKY+ G+ RFR 
Sbjct: 1   INGCISTGKEANVYHARTG---------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRS 51

Query: 99  GYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD 158
            Y K NPRK+V  WAEKE RNL R+Y  G+ VP+PILLK +VL+M FIG+DG PA +LKD
Sbjct: 52  RYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKD 111

Query: 159 TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPH 218
            PL E  A +LY + V  M RLY +  LVH DLSEYN+L H    +IIDV+Q+VE DHP+
Sbjct: 112 VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYHDGKPYIIDVSQAVELDHPN 171

Query: 219 ALQFLRKDCDNVTVF 233
           AL+FLR+D  N+  F
Sbjct: 172 ALEFLRRDIRNINRF 186

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and chromosome maintenance. The biological substrates for RIO1 are unknown. The function of RIO3 is also unknown. Length = 190

>gnl|CDD|214511 smart00090, RIO, RIO-like kinase

 Score =  293 bits (751), Expect = 3e-99
 Identities = 121/226 (53%), Positives = 156/226 (69%), Gaps = 9/226 (3%)

Query: 8   DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLEL 67
           DK DRAT E+V+D RTR+ L+ L++RG++S + GCISTGKEANVYHA        +    
Sbjct: 1   DKEDRATYEEVLDGRTRLALYSLLNRGILSAIGGCISTGKEANVYHAL-------DFDGS 53

Query: 68  EKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEG 127
            KE A+KI++T  L FK RD+YV+G+FRF+  Y K NPRK+VR WAEKE RNL R+Y  G
Sbjct: 54  GKERAVKIYRTGTLEFKRRDRYVDGDFRFK--YRKINPRKLVRLWAEKEFRNLQRLYEAG 111

Query: 128 LNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV 187
           + VPKPI  + +VL+M FIG DG PA +LKD    E    +LY + +  M +LY +  LV
Sbjct: 112 VPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELV 171

Query: 188 HADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           H DLSEYN+LVH   + IIDV+QSVE DHP AL+FL +D  N+  F
Sbjct: 172 HGDLSEYNILVHDGKVVIIDVSQSVELDHPMALEFLERDIRNIIRF 217

Length = 237

>gnl|CDD|224632 COG1718, RIO1, Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

 Score =  273 bits (700), Expect = 4e-91
 Identities = 116/268 (43%), Positives = 159/268 (59%), Gaps = 14/268 (5%)

Query: 1   MDRIKT-KDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGAN 59
             R K  KDK DR   ++V D RT   L +L+SRG+++E+ GCISTGKEANVY A  G  
Sbjct: 13  DKREKREKDKEDRKVVDEVFDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGD- 71

Query: 60  YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
                    +  A+KI++TS   FK   +Y+ G+ RFR+   + N RK+V  WA KE RN
Sbjct: 72  --------GRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNS--RSNRRKLVFAWARKEFRN 121

Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
           L R Y  G+ VP+PI  +++VL+M FIG+DG PA +LKD PL    A  LY + V  M R
Sbjct: 122 LKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRR 181

Query: 180 LYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPV 239
           LY +  LVH DLSEYN+LVH    +IIDV+Q+V  DHP+A +FL +D  N+  F     V
Sbjct: 182 LYKEAGLVHGDLSEYNILVHDGEPYIIDVSQAVTIDHPNAFEFLERDVRNIARFFRRKGV 241

Query: 240 SDDDEKIFKKWDSDYVTSSDEDEENVVD 267
             D E++ ++         + +EE +  
Sbjct: 242 EADPEELLEEIKGR--ILGEAEEERLRL 267

Length = 268

>gnl|CDD|240158 cd05119, RIO, RIO kinase family, catalytic domain

 Score =  268 bits (689), Expect = 1e-90
 Identities = 91/195 (46%), Positives = 118/195 (60%), Gaps = 12/195 (6%)

Query: 39  VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRH 98
           V G I TGKEA+VY A              +  A+KI++T    FK R +Y      +R 
Sbjct: 1   VGGPIGTGKEADVYLAL---------DGDGEPVAVKIYRTGRTSFKKRKRYR--TGDYRF 49

Query: 99  GYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD 158
           G  K N R + R WAEKE RNL R+Y  G+ VPKPI L  HVL+M FIG DG PA +LKD
Sbjct: 50  GRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKD 109

Query: 159 TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPH 218
             L E    +LY + + +M +LY +  LVH DLSEYN+LV    ++IIDV Q+VE DHP+
Sbjct: 110 VRLLED-PEELYDQILELMRKLYREAGLVHGDLSEYNILVDDGKVYIIDVPQAVEIDHPN 168

Query: 219 ALQFLRKDCDNVTVF 233
           A +FLR+D +N+  F
Sbjct: 169 AEEFLRRDVENINRF 183

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They function as non-ribosomal factors necessary for late 18S rRNA processing. RIO1 is also required for proper cell cycle progression and chromosome maintenance. The biological substrates for RIO kinases are still unknown. Length = 187

>gnl|CDD|201633 pfam01163, RIO1, RIO1 family

 Score =  247 bits (634), Expect = 3e-82
 Identities = 91/184 (49%), Positives = 117/184 (63%), Gaps = 12/184 (6%)

Query: 50  NVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMV 109
           NVYHA           E  K+ A+KI++T    FK R +Y +G+FRFR    K + R +V
Sbjct: 1   NVYHA---------YSEDGKKVAVKIYRTGTTSFKKRKRYRDGDFRFRD--SKTSWRYLV 49

Query: 110 RTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKL 169
           R WAEKE RNL R+Y  G+ VPKPI +  HVL+M FIG+DG PA +LKD  L E  A ++
Sbjct: 50  RLWAEKEFRNLKRLYEAGVPVPKPIAVNRHVLVMEFIGDDGVPAPRLKDVELEEE-AEEI 108

Query: 170 YRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDN 229
           Y E +  M RLY +  LVH DLSEYN+LV      IIDV Q+VE DHP+AL+FL +D +N
Sbjct: 109 YDEIIREMRRLYQEAGLVHGDLSEYNVLVDDDKPVIIDVPQAVETDHPNALEFLERDVEN 168

Query: 230 VTVF 233
           +  F
Sbjct: 169 IINF 172

This is a family of atypical serine kinases which are found in archaea, bacteria and eukaryotes. Activity of Rio1 is vital in Saccharomyces cerevisiae for the processing of ribosomal RNA, as well as for proper cell cycle progression and chromosome maintenance. The structure of RIO1 has been determined. Length = 186

>gnl|CDD|240169 cd05146, RIO3_euk, RIO kinase family; eukaryotic RIO3, catalytic domain

 Score =  241 bits (616), Expect = 2e-79
 Identities = 101/195 (51%), Positives = 135/195 (69%), Gaps = 2/195 (1%)

Query: 39  VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRH 98
           +NGCISTGKE+ V HA+ G+N       +  E AIK+FKT++  FK+RDKY+  ++RF+ 
Sbjct: 1   INGCISTGKESVVLHANGGSNE--TEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKD 58

Query: 99  GYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD 158
            + K NPRK++R WAEKEM NL RM   G+  P+ ++LK HVL+M+FIG+D  PA KLKD
Sbjct: 59  RFSKLNPRKIIRMWAEKEMHNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKD 118

Query: 159 TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPH 218
             L +      Y + + MM +LY +C+LVHADLSEYNML H   ++ IDV+QSVE  HPH
Sbjct: 119 AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHDGKVWFIDVSQSVEPTHPH 178

Query: 219 ALQFLRKDCDNVTVF 233
            L+FL +DC NV  F
Sbjct: 179 GLEFLFRDCRNVIQF 193

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. Length = 197

>gnl|CDD|240167 cd05144, RIO2_C, RIO kinase family; RIO2, C-terminal catalytic domain

 Score = 98.8 bits (247), Expect = 1e-24
 Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 41/215 (19%)

Query: 30  LISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFK---TSILVFKDR 86
           L+ RG+V  +   I  GKE++VY A       +         A+K  +   TS   F+ +
Sbjct: 10  LVKRGVVESLGNQIGVGKESDVYLALDPDGNPV---------ALKFHRLGRTS---FR-K 56

Query: 87  DKYVNGEFRFRHGYCKKNPRKMVRTW-------AEKEMRNLTRMYSEGLNVPKPILLKSH 139
            K        R             +W       A+KE   L  +Y EG  VPKPI    H
Sbjct: 57  VKRKRDYLGDRKHA----------SWLYLSRLAAQKEFAALKALYEEGFPVPKPIDWNRH 106

Query: 140 VLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV- 198
            ++M +I  DG    +++          ++  E +  + + Y K  ++H DLSE+N+LV 
Sbjct: 107 AVVMEYI--DGVELYRVRVL----EDPEEVLDEILEEIVKAY-KHGIIHGDLSEFNILVD 159

Query: 199 HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
               ++IID  Q V  DHP+A + L +D +N+  F
Sbjct: 160 DDEKIYIIDWPQMVSTDHPNAEELLDRDVENILRF 194

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH domains may be involved in RNA recognition. RIO2 is essential for survival and is necessary for rRNA cleavage during 40S ribosomal subunit maturation. The biological substrates of RIO2 are still unknown. Length = 198

>gnl|CDD|223554 COG0478, COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

 Score = 97.0 bits (242), Expect = 4e-23
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 33/233 (14%)

Query: 30  LISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKY 89
           L+ RG+V  +   I  GKE++VY A      K+         A+K  +     F+     
Sbjct: 86  LVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKV---------AVKFHRLGRTSFR----- 131

Query: 90  VNGEFRFRHGYCKKNPRK----MVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTF 145
              + +    Y           + R  AE+E   L R+Y EG+ VPKPI    H ++M +
Sbjct: 132 ---KVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAWNRHAVVMEY 188

Query: 146 IGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHK-ATLF 204
           I  +G    +L+              E V   +R      +VH DLSE+N+LV +   + 
Sbjct: 189 I--EGVELYRLRLDVENPDEILDKILEEVRKAYR----RGIVHGDLSEFNILVTEDGDIV 242

Query: 205 IIDVAQSVEHDHPHALQFLRKDCDNVTVF-----VILNPVSDDDEKIFKKWDS 252
           +ID  Q+V   HP A + L +D +N+  +            ++ +++ +  + 
Sbjct: 243 VIDWPQAVPISHPDAEELLERDVENIIKYFRRKYGYKVEKEEELDRVREASEF 295

Length = 304

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 17/104 (16%)

Query: 110 RTWAEKEMRNLTRMYSEGLNVPKPIL--LKSHVLLMTFI-GEDGWPAAKLKDTPLTESGA 166
           RT   +E R ++R    G+NVP       ++ +++M +I GE       LKD  L  S  
Sbjct: 45  RT--RREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGE------PLKD--LINSNG 94

Query: 167 CKLYRECVVMMWRLYNKCH---LVHADLSEYNMLVHKATLFIID 207
            +        + RL  K H   ++H DL+  NM++    +++ID
Sbjct: 95  MEELELSR-EIGRLVGKLHSAGIIHGDLTTSNMILSGGKIYLID 137

Length = 211

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 16/98 (16%)

Query: 115 KEMRNLTRMYSEGLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRE 172
            E R L+R    G+N P        +  ++M +I         LKD  + E G  +L RE
Sbjct: 46  NEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI-----EGKPLKD--VIEEGNDELLRE 98

Query: 173 CVVMMWRLYNKCH---LVHADLSEYNMLVHKATLFIID 207
               + RL  K H   +VH DL+  N++V    L++ID
Sbjct: 99  ----IGRLVGKLHKAGIVHGDLTTSNIIVRDDKLYLID 132

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	351
KOG2270|consensus	520		100.0
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	100.0
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	100.0
KOG2269|consensus	531		100.0
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	100.0
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	100.0
COG0478	304	RIO-like serine/threonine protein kinase fused to	100.0
smart00090	237	RIO RIO-like kinase.	100.0
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	100.0
KOG2268|consensus	465		99.97
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.95
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.94
KOG0593|consensus	396		99.87
KOG0595|consensus	429		99.87
KOG0615|consensus	475		99.85
KOG0659|consensus	318		99.85
PRK09188	365	serine/threonine protein kinase; Provisional	99.85
KOG0667|consensus	586		99.83
KOG0663|consensus	419		99.83
KOG0661|consensus	538		99.83
KOG0592|consensus	604		99.83
KOG0605|consensus	550		99.83
KOG0616|consensus	355		99.83
KOG0600|consensus	560		99.82
KOG0583|consensus	370		99.82
PRK12274	218	serine/threonine protein kinase; Provisional	99.82
KOG0598|consensus	357		99.82
KOG4250|consensus	732		99.82
KOG0581|consensus	364		99.81
KOG0594|consensus	323		99.8
PRK14879	211	serine/threonine protein kinase; Provisional	99.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.8
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.79
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.79
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.79
KOG0585|consensus	576		99.79
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.78
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.78
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.78
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.78
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.78
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.78
KOG0575|consensus	592		99.78
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.78
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.78
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.77
KOG0658|consensus	364		99.77
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.77
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.77
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.77
KOG0611|consensus	668		99.77
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.77
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.77
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.77
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.77
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.77
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.77
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.76
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.76
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.76
KOG0032|consensus	382		99.76
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.76
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.76
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.76
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.76
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.75
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.75
PTZ00284	467	protein kinase; Provisional	99.75
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.75
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.75
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.75
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.74
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.74
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.74
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.74
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.74
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.74
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.74
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.74
PHA03212	391	serine/threonine kinase US3; Provisional	99.74
KOG0580|consensus	281		99.74
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.73
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.73
KOG0192|consensus	362		99.73
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.73
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.73
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.73
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.73
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.73
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.73
PTZ00283	496	serine/threonine protein kinase; Provisional	99.72
PTZ00036	440	glycogen synthase kinase; Provisional	99.72
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.72
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.72
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.72
KOG4236|consensus	888		99.72
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.72
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.72
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.72
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.72
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.72
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.72
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.72
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.72
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.72
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.72
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.71
KOG0198|consensus	313		99.71
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.71
KOG1989|consensus	738		99.71
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.71
PHA03209	357	serine/threonine kinase US3; Provisional	99.71
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.71
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.71
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.71
KOG0588|consensus	786		99.7
KOG0591|consensus	375		99.7
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.7
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.7
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.7
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.7
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.7
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.7
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.7
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.7
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.7
KOG0694|consensus	694		99.7
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.7
KOG1163|consensus	341		99.69
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.69
KOG0597|consensus	808		99.69
KOG0660|consensus	359		99.69
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.69
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.69
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.69
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.69
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.69
KOG0670|consensus	752		99.69
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.69
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.69
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.69
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.69
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.69
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.69
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.69
PTZ00267	478	NIMA-related protein kinase; Provisional	99.69
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.69
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.69
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.69
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.68
PHA03211	461	serine/threonine kinase US3; Provisional	99.68
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.68
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.68
KOG0610|consensus	459		99.68
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.68
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.68
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.68
KOG0612|consensus	1317		99.68
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.68
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.68
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.68
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.68
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.68
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.68
PHA03207	392	serine/threonine kinase US3; Provisional	99.68
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.67
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.67
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.67
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.67
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.67
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.67
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.67
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.67
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.67
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.67
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.67
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.66
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.66
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.66
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.66
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.66
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.66
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.66
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.66
KOG3087|consensus	229		99.66
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.66
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.66
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.66
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.66
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.66
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.66
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.66
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.66
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.66
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.66
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.66
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.66
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.66
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.66
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.66
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.66
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.66
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.66
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.66
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.66
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.66
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.65
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.65
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.65
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.65
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.65
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.65
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.65
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.65
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.65
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.65
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.65
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.65
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.65
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.65
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.65
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.65
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.65
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.64
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.64
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.64
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.64
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.64
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.64
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.64
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.64
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.64
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.64
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.64
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.64
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.64
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.64
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.64
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.64
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.64
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.64
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.64
KOG0586|consensus	596		99.64
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.63
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.63
KOG0193|consensus	678		99.63
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.63
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.63
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.63
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.63
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.63
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.63
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.63
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.63
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.63
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.63
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.63
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.63
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.63
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.63
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.63
KOG0596|consensus	677		99.63
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.63
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.63
KOG0668|consensus	338		99.63
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.63
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.63
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.63
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.63
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.63
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.63
KOG0589|consensus	426		99.63
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.63
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.62
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.62
KOG1165|consensus	449		99.62
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.62
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.62
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.62
PHA02882	294	putative serine/threonine kinase; Provisional	99.62
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.62
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.62
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.62
PLN00009	294	cyclin-dependent kinase A; Provisional	99.62
KOG1187|consensus	361		99.62
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.62
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.62
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.62
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.62
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.62
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.62
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.62
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.62
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.62
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.62
KOG0666|consensus	438		99.62
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.62
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.62
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.61
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.61
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.61
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.61
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.61
KOG0033|consensus	355		99.61
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.61
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.61
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.61
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.61
KOG0662|consensus	292		99.61
KOG0582|consensus	516		99.61
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.61
PHA03210	501	serine/threonine kinase US3; Provisional	99.61
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.61
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.61
KOG0577|consensus	948		99.61
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.61
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.61
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.61
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.61
KOG0608|consensus	1034		99.61
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.61
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.61
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.6
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.6
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.6
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.6
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.6
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.6
KOG1164|consensus	322		99.6
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.6
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.6
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.6
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.6
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.6
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.6
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.6
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.6
KOG0671|consensus	415		99.6
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.59
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.59
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.59
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.59
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.59
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.59
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.59
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.59
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.59
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.59
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.59
PHA02988	283	hypothetical protein; Provisional	99.58
KOG0578|consensus	550		99.58
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.58
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.58
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.58
KOG0574|consensus	502		99.58
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.58
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.58
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.58
KOG0197|consensus	468		99.58
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.57
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.57
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.57
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.57
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.57
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.56
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.56
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.56
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.56
KOG0690|consensus	516		99.56
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.56
KOG0604|consensus	400		99.56
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.56
KOG0599|consensus	411		99.55
KOG4717|consensus	864		99.55
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.55
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.55
KOG0201|consensus	467		99.54
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.54
KOG0986|consensus	591		99.54
KOG1152|consensus	772		99.54
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.53
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.53
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.53
KOG1290|consensus	590		99.53
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.52
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.52
KOG1166|consensus	974		99.52
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.51
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.51
KOG2345|consensus	302		99.51
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.5
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.5
PRK10345	210	hypothetical protein; Provisional	99.5
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.49
KOG4721|consensus	904		99.49
KOG1345|consensus	378		99.48
KOG0579|consensus	1187		99.47
KOG1167|consensus	418		99.47
KOG1151|consensus	775		99.47
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.46
KOG0194|consensus	474		99.45
KOG4645|consensus	1509		99.45
KOG0603|consensus	612		99.45
KOG3653|consensus	534		99.45
KOG1035|consensus	1351		99.44
KOG0587|consensus	953		99.44
COG0661	517	AarF Predicted unusual protein kinase [General fun	99.43
KOG2052|consensus	513		99.43
KOG0669|consensus	376		99.42
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.41
KOG0607|consensus	463		99.4
KOG0696|consensus	683		99.39
KOG0984|consensus	282		99.38
KOG1094|consensus	807		99.35
KOG0664|consensus	449		99.33
KOG0983|consensus	391		99.31
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	99.3
KOG1006|consensus	361		99.29
KOG1095|consensus	1025		99.29
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.25
KOG4279|consensus	1226		99.24
KOG0199|consensus	1039		99.24
KOG0695|consensus	593		99.24
KOG0614|consensus	732		99.23
KOG0576|consensus	829		99.22
KOG4257|consensus	974		99.2
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	99.19
KOG0196|consensus	996		99.19
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.17
KOG1235|consensus	538		99.17
PRK05231	319	homoserine kinase; Provisional	99.17
KOG0665|consensus	369		99.17
KOG1027|consensus	903		99.17
KOG1025|consensus	1177		99.16
PF01636	239	APH: Phosphotransferase enzyme family This family	99.16
KOG1026|consensus	774		99.16
KOG0584|consensus	632		99.13
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	99.12
PRK09902	216	hypothetical protein; Provisional	99.11
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	99.06
COG2334	331	Putative homoserine kinase type II (protein kinase	99.05
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	99.05
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	99.02
KOG0200|consensus	609		99.0
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.96
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.96
KOG4278|consensus	1157		98.9
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	98.9
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.85
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.85
PRK11768	325	serine/threonine protein kinase; Provisional	98.84
PLN00181	793	protein SPA1-RELATED; Provisional	98.83
PLN02876	822	acyl-CoA dehydrogenase	98.78
PRK10593	297	hypothetical protein; Provisional	98.78
KOG0590|consensus	601		98.73
PRK06148	1013	hypothetical protein; Provisional	98.73
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	98.61
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.56
PRK06149	972	hypothetical protein; Provisional	98.49
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	98.45
PLN02236	344	choline kinase	98.36
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	98.28
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	98.27
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	98.17
PRK12396	409	5-methylribose kinase; Reviewed	98.13
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	98.11
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	98.1
KOG1240|consensus	1431		98.1
KOG4158|consensus	598		98.1
KOG0603|consensus	612		98.08
PLN02756	418	S-methyl-5-thioribose kinase	98.07
KOG0606|consensus	1205		97.94
KOG1236|consensus	565		97.92
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.9
PTZ00384	383	choline kinase; Provisional	97.81
PTZ00296	442	choline kinase; Provisional	97.79
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.78
KOG1024|consensus	563		97.57
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.36
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	97.18
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.17
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	96.98
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	96.91
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	96.86
KOG0601|consensus	524		96.84
KOG0590|consensus	601		96.64
KOG0601|consensus	524		96.44
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.44
TIGR02905	313	spore_yutH spore coat protein YutH. Members of thi	96.36
KOG3021|consensus	313		96.26
KOG1234|consensus	363		96.04
PRK10271	188	thiK thiamine kinase; Provisional	95.96
KOG3741|consensus	655		95.65
KOG4720|consensus	391		95.52
KOG1033|consensus	516		95.31
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	95.23
COG4248	637	Uncharacterized protein with protein kinase and he	95.09

>KOG2270|consensus

Probab=100.00  E-value=2e-90  Score=669.66  Aligned_cols=308  Identities=57%  Similarity=0.973  Sum_probs=288.3

Q ss_pred             ccccccccchhhhhhhhCChhHHHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCch
Q psy10135          2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSIL   81 (351)
Q Consensus         2 ~~~~~~d~~~~~t~~~v~d~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~   81 (351)
                      +|.|.|||+|||||||||||||||+|++|++||+|-.|+|||++|++|+||||+. .+        |..+|||||++|++
T Consensus       111 ~~~r~kDKaDRATvEqVLDPRTrmvLfrll~RG~i~~inGCiSTGKEANVYHat~-~d--------G~~~AIKIYKTSIL  181 (520)
T KOG2270|consen  111 DRKRVKDKADRATVEQVLDPRTRMVLFRLLNRGVIVEINGCISTGKEANVYHATE-ED--------GSEFAIKIYKTSIL  181 (520)
T ss_pred             hhhhcccchhhhhHHHhcChHHHHHHHHHHhcCeeeecccccccCccceeEeeec-CC--------CceEEEEEEeeeEE
Confidence            5789999999999999999999999999999999999999999999999999988 66        99999999999999


Q ss_pred             hhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCC
Q psy10135         82 VFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPL  161 (351)
Q Consensus        82 ~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l  161 (351)
                      +|+++++|+.||+|||||||++|||+|+++||++|+|||+||+.+|||||+||.+..|||||+|||.+||++|.|+++.+
T Consensus       182 vFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~l  261 (520)
T KOG2270|consen  182 VFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASL  261 (520)
T ss_pred             EEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCceeeecceEeeeeccCCCCcCcccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhcc-------
Q psy10135        162 TESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV-------  234 (351)
Q Consensus       162 ~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff-------  234 (351)
                      +..++..+|.+++..|+.||+.|+|||+||+++||||++|++||||+||||+++||+|++|||+||.||++||       
T Consensus       262 s~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG~lyiIDVSQSVE~DHP~aldFLRmDc~NVn~FF~r~gv~v  341 (520)
T KOG2270|consen  262 STSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDGKLYIIDVSQSVEHDHPHALDFLRMDCNNVNDFFRRLGVAV  341 (520)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEECCEEEEEEccccccCCChhHHHHHHHHHHHHHHHHHHcCCee
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999       


Q ss_pred             ---------ccCCCCCc--HHHHHHhhhhcCC-----CCccccc-------------ccccchhHHHHHHhcCCCCCCcc
Q psy10135        235 ---------ILNPVSDD--DEKIFKKWDSDYV-----TSSDEDE-------------ENVVDFERDINLIKSGQGSSNTL  285 (351)
Q Consensus       235 ---------~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~-------------~~~~~~e~d~~~~~~~~~~~~~~  285 (351)
                               +++|.|+.  |+.+|++++..+.     +.|++++             ++|.++|||+.++++|...+.++
T Consensus       342 ~t~r~LFefI~d~~i~~~nmd~~l~~l~~~~~~r~~~s~qd~~~d~vf~~ayIPr~L~eV~~~erDv~k~~~~~~~~~~~  421 (520)
T KOG2270|consen  342 MTVRELFEFITDPTITLENMDAYLEELKAIIISRDEISEQDEIEDEVFMKAYIPRRLDEVGNFERDVGKFAAGSLVARNL  421 (520)
T ss_pred             ecHHHHHHHhhccccchhhHHHHHHHHHHHHhcCcccchhhhhHHHHHHHhcccchhhhhcChhhhhhhhhccchhhccc
Confidence                     88888886  8999999876554     3444444             88899999999999986445789


Q ss_pred             hhhhhhhhccccCCCCCchhhhhcCCCCcccCC
Q psy10135        286 IYQNIVGLNADLSGPKLIPELLAQDKDDEETGE  318 (351)
Q Consensus       286 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (351)
                      +|++++||..||.+.+..+.+.+++.++++.++
T Consensus       422 ~~~~~t~l~~d~~~~e~~~~~~~~~~ee~dgs~  454 (520)
T KOG2270|consen  422 LYTTITGLDFDLAKHEKDDSLGEDSVEEEDGSE  454 (520)
T ss_pred             hhhhhhcccccccccccCccccccccccccccc
Confidence            999999999999999998887777766665444

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=100.00  E-value=1.3e-57  Score=423.75  Aligned_cols=240  Identities=46%  Similarity=0.781  Sum_probs=225.7

Q ss_pred             ccccccchhhhhhhhCChhHHHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhh
Q psy10135          4 IKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVF   83 (351)
Q Consensus         4 ~~~~d~~~~~t~~~v~d~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~f   83 (351)
                      .|.||+++|+|+++|+|++|.+.|.+|.++|.+..+.+||++|++|+||+|.. .+        +..+|+|||+++...|
T Consensus        17 kr~Kd~~~~k~~~~v~D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~-~~--------~~~~avKiyr~~t~~f   87 (268)
T COG1718          17 KREKDKEDRKVVDEVFDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAET-GD--------GRYVAVKIYRTSTSEF   87 (268)
T ss_pred             HhhhcchHhhhhhhhhhhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeecc-CC--------CceEEEEEEehhhhhh
Confidence            45699999999999999999999999999999999999999999999999987 56        8999999999999999


Q ss_pred             hhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCH
Q psy10135         84 KDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTE  163 (351)
Q Consensus        84 k~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~  163 (351)
                      +...+|+.|++||++.  +.|++.++..|+++|++||+|++.+||+||+|+....++|||||||.+|.++|+|++.++++
T Consensus        88 k~~~~Yi~gd~Rf~~~--~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~  165 (268)
T COG1718          88 KRIRRYIQGDPRFRNS--RSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLEL  165 (268)
T ss_pred             hhHHHHHhcChhhhcC--CCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCc
Confidence            9999999999999984  45999999999999999999999999999999999999999999998899999999999888


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCC-c
Q psy10135        164 SGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD-D  242 (351)
Q Consensus       164 ~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~-~  242 (351)
                      .++..+|.+++..|+.|++.+||||||||++|||++++.++||||||||.++||+|.+||+|||.||+.||... ++. +
T Consensus       166 ~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~~p~iID~~QaV~~~hp~a~e~L~RDv~Ni~~fF~r~-gv~~d  244 (268)
T COG1718         166 EEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDGEPYIIDVSQAVTIDHPNAFEFLERDVRNIARFFRRK-GVEAD  244 (268)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECCeEEEEECccccccCCCchHHHHHHHHHHHHHHHHHc-CCCCC
Confidence            89999999999999999977999999999999999999999999999999999999999999999999999443 443 4


Q ss_pred             HHHHHHhhhhcCC
Q psy10135        243 DEKIFKKWDSDYV  255 (351)
Q Consensus       243 ~~~~~~~~~~~~~  255 (351)
                      .+++++.++..+.
T Consensus       245 ~e~~l~~i~~~~~  257 (268)
T COG1718         245 PEELLEEIKGRIL  257 (268)
T ss_pred             HHHHHHHHhhccC
Confidence            8899998877665

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=100.00  E-value=3.4e-48  Score=352.99  Aligned_cols=195  Identities=52%  Similarity=0.891  Sum_probs=176.3

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      |.++||+||+|+||+|.....  ......+..+|||||+++...|+++..|+.|++||+..+++.||++++++|+++|++
T Consensus         1 ~~g~i~~GKEa~V~~~~~~~~--~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r   78 (197)
T cd05146           1 INGCISTGKESVVLHANGGSN--ETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMH   78 (197)
T ss_pred             CCCccccCcceEEEEEecCcc--cccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999986220  000112579999999999999999999999999998777889999999999999999


Q ss_pred             HHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        119 NLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      +|.+|+.+|++||+|+....++|||||+|++|.+.+.|++..++..++..++.+++.+|..|||++|||||||+|+|||+
T Consensus        79 ~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~  158 (197)
T cd05146          79 NLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW  158 (197)
T ss_pred             HHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            99999999999999999999999999998677788888887777777889999999999999547999999999999999


Q ss_pred             eCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccc
Q psy10135        199 HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI  235 (351)
Q Consensus       199 ~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~  235 (351)
                      ++++++|||||||+..+||+|.+||+|||.||..||.
T Consensus       159 ~~~~v~iIDF~qav~~~hp~a~~~l~RD~~ni~~fF~  195 (197)
T cd05146         159 HDGKVWFIDVSQSVEPTHPHGLEFLFRDCRNVIQFFQ  195 (197)
T ss_pred             ECCcEEEEECCCceeCCCCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999994

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG2269|consensus

Probab=100.00  E-value=3.7e-48  Score=370.78  Aligned_cols=275  Identities=40%  Similarity=0.692  Sum_probs=238.6

Q ss_pred             cccccchhhhhhhhCChhHHHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCccc--ccccCCcEEEEEEeeCCchh
Q psy10135          5 KTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI--ENLELEKEFAIKIFKTSILV   82 (351)
Q Consensus         5 ~~~d~~~~~t~~~v~d~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~--~~~~~g~~vAIKi~k~s~~~   82 (351)
                      |.++|...||.|-.+|+.||+.|++|+|.|++-.|.|||++|+++.|++|.....--+  .+--....||||||++....
T Consensus       222 r~heK~e~aTae~~vD~~TRLLlyK~iN~gvle~i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnE  301 (531)
T KOG2269|consen  222 RNHEKEEKATAETSVDSDTRLLLYKWINQGVLESIDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNE  301 (531)
T ss_pred             hhhhhhhhhhhhhccCCCceehHHHHHhhhhHHhhhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHH
Confidence            4578889999999999999999999999999999999999999999999965221000  00011356999999999999


Q ss_pred             hhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCC
Q psy10135         83 FKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLT  162 (351)
Q Consensus        83 fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~  162 (351)
                      |+++++|+..++||+..++|.|||.+.+.||++|+.||.|+...|++||.++.++.|+|||.|||.+|.++|+|+++.|+
T Consensus       302 FKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkEmhNL~RMq~~GlpcP~vV~lkkhvLVMsFiGd~~~aAPkLK~v~l~  381 (531)
T KOG2269|consen  302 FKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKEMHNLSRMQKHGLPCPQVVKLKKHVLVMSFIGDQGLAAPKLKNVELT  381 (531)
T ss_pred             HhhhhhhhccchhhhhhhcccCcHHHHHHHHHHHHHHHHHHHhcCCCCCceeeeecceEEEEeecCCCCCCccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhcc--ccCCCC
Q psy10135        163 ESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV--ILNPVS  240 (351)
Q Consensus       163 ~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff--~~~~~~  240 (351)
                      .++.+..|.|++.+|.+||+.|-|||+||++||||++.|++|+||++||++..||++++||.|||.||..||  +.-|++
T Consensus       382 d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~gKvw~IDVsQsvep~HP~~LeFL~RDc~Ni~~FF~r~G~pn~  461 (531)
T KOG2269|consen  382 DDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTPGKVWVIDVSQSVEPSHPRSLEFLTRDCQNIITFFTRIGTPNL  461 (531)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecCCceEEEechhccCCCCcchhHHHHHHHHHHHHHHHhcCCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999  334555


Q ss_pred             CcHHHHHHhhhhcCC--CCcccccccccchhHHHHHHhcCC
Q psy10135        241 DDDEKIFKKWDSDYV--TSSDEDEENVVDFERDINLIKSGQ  279 (351)
Q Consensus       241 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~e~d~~~~~~~~  279 (351)
                      +...++++-+...-.  ..+..+..+...+||-++..-++.
T Consensus       462 ~t~~qLFn~itgLn~tadn~~~~~~E~~~lE~~~el~~~Ks  502 (531)
T KOG2269|consen  462 PTYVQLFNLITGLNMTADNDLLVQVEQFSLERSVELRHDKS  502 (531)
T ss_pred             ccHHHHHHHHhccccCCCchhhhhhhhhhhhhhhHHhhhhh
Confidence            554555544433222  344556678888888777655443

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=100.00  E-value=2.8e-38  Score=285.78  Aligned_cols=188  Identities=71%  Similarity=1.182  Sum_probs=165.8

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.++||+|++|.||+|.+ .+        |++||||+++++...+.....|+.+..||++.+.+.+++.++..|++.|++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~-~~--------g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05147           1 INGCISTGKEANVYHATT-AN--------GEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMR   71 (190)
T ss_pred             CCCccccccceEEEEEEC-CC--------CCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHH
Confidence            468999999999999998 47        999999999988777766667888888998877888999999999999999


Q ss_pred             HHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        119 NLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      +|.+|...|+++|.++....++|||||+++.......+...+++..++..++.|++.+|.++|+.+|||||||||+|||+
T Consensus        72 ~l~~l~~~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147          72 NLKRLVTAGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             HHHHHHHCCCCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            99999999998998887788899999996322222234556788888999999999999999546999999999999999


Q ss_pred             eCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccc
Q psy10135        199 HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI  235 (351)
Q Consensus       199 ~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~  235 (351)
                      +++.++|||||+|...+||++.+||+|||.|+.+||.
T Consensus       152 ~~~~v~LiDFG~a~~~~~~~~~~~~~~d~~~~~~~f~  188 (190)
T cd05147         152 HDGKLYIIDVSQSVEHDHPHALEFLRMDCVNVNDFFR  188 (190)
T ss_pred             ECCcEEEEEccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence            9899999999999999999999999999999999994

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=100.00  E-value=7.8e-39  Score=289.77  Aligned_cols=179  Identities=40%  Similarity=0.705  Sum_probs=150.2

Q ss_pred             EEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCC
Q psy10135         50 NVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLN  129 (351)
Q Consensus        50 ~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~  129 (351)
                      +||.|.. .+        |..+|||+|+.+...|+...+|+.+.+||.+.+++.+++.+++.|+++|+++|.+|+..|++
T Consensus         1 ~Vy~~~~-~~--------~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~   71 (188)
T PF01163_consen    1 DVYHAID-PD--------GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVP   71 (188)
T ss_dssp             EEEEEEE-CT--------TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-S
T ss_pred             CEEEEEC-CC--------CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            6999998 66        89999999999999999999999999999887778889999999999999999999999999


Q ss_pred             ccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEcc
Q psy10135        130 VPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVA  209 (351)
Q Consensus       130 vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG  209 (351)
                      ||+|+....++||||||+.+|.+++.|.+..++..++..++.+++..+..+++++|||||||+++|||+.+++++|||||
T Consensus        72 vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~~~iIDf~  151 (188)
T PF01163_consen   72 VPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGKVYIIDFG  151 (188)
T ss_dssp             S--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTCEEE--GT
T ss_pred             CCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecceEEEEecC
Confidence            99999999999999999656999999998776667788999999998887765799999999999999999999999999


Q ss_pred             ccccCCCCChHHHHHhhhhhhhhccccC
Q psy10135        210 QSVEHDHPHALQFLRKDCDNVTVFVILN  237 (351)
Q Consensus       210 ~Av~~~~p~a~~fl~~D~~~v~~ff~~~  237 (351)
                      ||+...||+|.+||+||+.||..||...
T Consensus       152 qav~~~~p~a~~~l~RDi~ni~~fF~~~  179 (188)
T PF01163_consen  152 QAVDSSHPNAEELLRRDIENIIRFFKKK  179 (188)
T ss_dssp             TEEETTSTTHHHHHHHHHHHHHHHHHCC
T ss_pred             cceecCCccHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-36  Score=281.99  Aligned_cols=209  Identities=27%  Similarity=0.460  Sum_probs=180.4

Q ss_pred             HHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhcc---ccccccccccccc
Q psy10135         24 RMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRD---KYVNGEFRFRHGY  100 (351)
Q Consensus        24 ~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~---~yv~ge~Rfr~~~  100 (351)
                      .++|..|.++|+++.|+..||.|++|.||.|.+ +.        |.++|||++|.+..+|+...   .|+.+       .
T Consensus        80 ~LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~-~~--------g~~~~vKfHR~GrtsFrkvk~~R~y~~~-------~  143 (304)
T COG0478          80 ALALHALVKRGIVEAIGTKIGVGKESDVYVAID-PK--------GRKVAVKFHRLGRTSFRKVKRNRDYLAD-------K  143 (304)
T ss_pred             HHHHHHHHHcChHHhhccccccCccceEEEEEC-CC--------CCEEEEEEeecCchhhhhhcchhhhhcc-------c
Confidence            578999999999999999999999999999999 66        99999999998888887543   33321       1


Q ss_pred             cCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHH
Q psy10135        101 CKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       101 ~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      .+.+|....++.|++||..|.+|+..|++||+|++.++|++||||+  +|.++..++   +..+.+..++..|+..++.+
T Consensus       144 ~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~nRHaVvMe~i--eG~eL~~~r---~~~en~~~il~~il~~~~~~  218 (304)
T COG0478         144 EHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAWNRHAVVMEYI--EGVELYRLR---LDVENPDEILDKILEEVRKA  218 (304)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCccccccceeeeehc--ccceeeccc---CcccCHHHHHHHHHHHHHHH
Confidence            3357889999999999999999999999999999999999999999  787665544   35567788999999999999


Q ss_pred             HhhCCccccCCCCCceEEe-CCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCC-CcHHHHHHhhhhcC
Q psy10135        181 YNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS-DDDEKIFKKWDSDY  254 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~-~~~~~~~~~~~~~~  254 (351)
                      + ++|+|||||+|+|||+. +|.+++|||.||+..+||+|.++|.||+.||..||...+.. .+..+.++.+.+..
T Consensus       219 ~-~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~l~RDv~nii~yFrrky~~~~~~~e~l~~~~~a~  293 (304)
T COG0478         219 Y-RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEELLERDVENIIKYFRRKYGYKVEKEEELDRVREAS  293 (304)
T ss_pred             H-HcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHHHHhHHHHHHHHHHHhccccccHHHHHHHHHHHh
Confidence            9 69999999999999996 57999999999999999999999999999999999777666 34566666655443

>smart00090 RIO RIO-like kinase

Probab=100.00  E-value=6.3e-35  Score=272.80  Aligned_cols=230  Identities=53%  Similarity=0.879  Sum_probs=193.1

Q ss_pred             ccchhhhhhhhCChhHHHHHHHHHhcCceeeecceeeecCceEEEEEE-eCCCcccccccCCcEEEEEEeeCCchhhhhc
Q psy10135          8 DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHAS-PGANYKIENLELEKEFAIKIFKTSILVFKDR   86 (351)
Q Consensus         8 d~~~~~t~~~v~d~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~-~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~   86 (351)
                      ||.||+|++.|++-+++..++.|+++|.+|.|..+||+|++|.||+|. +..+        |++||||+++.+...+...
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~--------g~~vaiK~~~~~~~~~~~~   72 (237)
T smart00090        1 DKEDRATYEEVLDGRTRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGS--------GKERAVKIYRTGTLEFKRR   72 (237)
T ss_pred             CcccceehhhccChHHHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCC--------CcEEEEEEEEcCcceecch
Confidence            789999999999999999999999999999999999999999999998 4356        9999999999877666555


Q ss_pred             cccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCccccccc--ccccCCCCHH
Q psy10135         87 DKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAA--KLKDTPLTES  164 (351)
Q Consensus        87 ~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~--~L~~~~l~~~  164 (351)
                      ..+..+.++|.  +.+.+++.+++.+.+.|+.+|.+|...++.+|+++....++|||||++  |..+.  .+....+...
T Consensus        73 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~~~~~~~lV~E~~~--g~~L~~~~~~~~~~~~~  148 (237)
T smart00090       73 DRYVDGDFRFK--YRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPIAWRRNVLVMEFIG--GDGLPAPRLKDVEPEEE  148 (237)
T ss_pred             hhhcccchhhc--cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeEecCceEEEEEec--CCcccccccccCCcchH
Confidence            55555544443  234688889999999999999999988899999998888999999995  43332  2334455556


Q ss_pred             HHHHHHHHHHHHHHHHHhhCC-ccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCC-c
Q psy10135        165 GACKLYRECVVMMWRLYNKCH-LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD-D  242 (351)
Q Consensus       165 ~~~~l~~qll~~L~~LH~~~g-lVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~-~  242 (351)
                      ++..++.|++.++.+|| ..| ++||||||.|||+.+++++|||||.|...++|.+..++.+|+.++..+|..-...+ +
T Consensus       149 ~~~~i~~qi~~~l~~LH-~~g~iiH~Dikp~NIli~~~~i~LiDFg~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  227 (237)
T smart00090      149 EEFELYDDILEEMRKLY-KEGELVHGDLSEYNILVHDGKVVIIDVSQSVELDHPMALEFLERDIRNIIRFFRRKGVDELD  227 (237)
T ss_pred             HHHHHHHHHHHHHHHHH-hcCCEEeCCCChhhEEEECCCEEEEEChhhhccCCcchHHHHHHHHHHHHHHHHHcCCCcCC
Confidence            67889999999999999 589 99999999999999889999999999999999999999999999999995542222 2


Q ss_pred             HHHHHHhh
Q psy10135        243 DEKIFKKW  250 (351)
Q Consensus       243 ~~~~~~~~  250 (351)
                      .+++++++
T Consensus       228 ~~~~~~~~  235 (237)
T smart00090      228 EEELFERI  235 (237)
T ss_pred             HHHHHHHh
Confidence            66666654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=100.00  E-value=1.8e-34  Score=259.67  Aligned_cols=189  Identities=59%  Similarity=0.985  Sum_probs=163.6

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      |.+.||+|++|.||+|.+ .+        |+.||||+++++...+....+++.++.+|+....+.++..++..|...|++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~-~~--------g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05145           1 INGCISTGKEANVYHART-GD--------GEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFR   71 (190)
T ss_pred             CCceeecCCCcEEEEEEc-CC--------CCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHH
Confidence            468999999999999998 47        999999999998766666667777777877644346788899999999999


Q ss_pred             HHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        119 NLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      ++.+|.+.|+.+|.++.....+|||||+++.......+...+++..++..++.+++.++.+||+..||+||||||.|||+
T Consensus        72 ~l~~l~~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll  151 (190)
T cd05145          72 NLKRLYEAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY  151 (190)
T ss_pred             HHHHHHhCCCCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE
Confidence            99999999999999988777899999996222333345556778888999999999999999954899999999999999


Q ss_pred             eCCeEEEEEccccccCCCCChHHHHHhhhhhhhhcccc
Q psy10135        199 HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVIL  236 (351)
Q Consensus       199 ~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~  236 (351)
                      .+++++|||||+|+..++|+++.|++||+.||..||..
T Consensus       152 ~~~~~~liDFG~a~~~~~~~~~~~~~~~~~~~~~~~~~  189 (190)
T cd05145         152 HDGKPYIIDVSQAVELDHPNALEFLRRDIRNINRFFRK  189 (190)
T ss_pred             ECCCEEEEEcccceecCCCCHHHHHHHHHHHHHHHhhc
Confidence            98999999999999999999999999999999999953

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG2268|consensus

Probab=99.97  E-value=2.1e-32  Score=262.77  Aligned_cols=191  Identities=27%  Similarity=0.505  Sum_probs=170.6

Q ss_pred             HHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhh---ccccccccccccccc
Q psy10135         24 RMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD---RDKYVNGEFRFRHGY  100 (351)
Q Consensus        24 ~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~---~~~yv~ge~Rfr~~~  100 (351)
                      -++|..|.+||++|.++..||.|+++.||.+.+ ..        |.+.++|+++.+..+|+.   .+.|.    |-++  
T Consensus        81 yLAlktL~~R~~v~svGnqIGVGKESDIY~v~d-~~--------G~~~~lK~HRLGRtSFR~Vk~kRDY~----r~r~--  145 (465)
T KOG2268|consen   81 YLALKTLSNRGSVESVGNQIGVGKESDIYVVAD-EE--------GNPLILKLHRLGRTSFRNVKNKRDYL----RKRK--  145 (465)
T ss_pred             HHHHHHHHhcchhhhhccccccccccceEEEec-CC--------CCchhHHHHhhhhhhHHHhhhhhhhH----hcCC--
Confidence            578999999999999999999999999999998 66        999999999987777754   44454    2222  


Q ss_pred             cCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHH
Q psy10135        101 CKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       101 ~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~L  180 (351)
                       ..+|.++.++.|.+||..|+.|+..|++||+||+.++||+|||++  +|+|+.+++...    .+..+|..++..+-.|
T Consensus       146 -~~sWlyLSRlaa~kEfafmkaL~e~gfpVPkpiD~~RH~Vvmelv--~g~Pl~~v~~v~----d~~~ly~~lm~~Iv~l  218 (465)
T KOG2268|consen  146 -SGSWLYLSRLAATKEFAFMKALYERGFPVPKPIDHNRHCVVMELV--DGYPLRQVRHVE----DPPTLYDDLMGLIVRL  218 (465)
T ss_pred             -ccchhhhHHHHHHHHHHHHHHHHHcCCCCCCcccccceeeHHHhh--cccceeeeeecC----ChHHHHHHHHHHHHHH
Confidence             356999999999999999999999999999999999999999999  899998887653    4568999999999999


Q ss_pred             HhhCCccccCCCCCceEEe-CCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccC
Q psy10135        181 YNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILN  237 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~  237 (351)
                      . ++|+||||+.+.|||+. ++++++|||.|++..+||+|..||.||+.+|..||...
T Consensus       219 a-~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~~YFdRDv~Ci~~fFrKk  275 (465)
T KOG2268|consen  219 A-NHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAEYYFDRDVECIRAFFRKK  275 (465)
T ss_pred             H-HcCceecccchheeEEecCCCEEEeechHhhccCCCccceeecccHHHHHHHHHHh
Confidence            8 69999999999999996 68899999999999999999999999999999999443

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.95  E-value=6e-27  Score=207.70  Aligned_cols=185  Identities=49%  Similarity=0.810  Sum_probs=148.8

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.++||+|+||.||+|.+ .+        |++||||+++.....+.....++.+  +......+.++..+...+...|+.
T Consensus         1 ~~~~lg~G~~g~Vy~a~~-~~--------~~~vavKv~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~   69 (187)
T cd05119           1 VGGPIGTGKEADVYLALD-GD--------GEPVAVKIYRTGRTSFKKRKRYRTG--DYRFGRKKSNWRYLSRLWAEKEFR   69 (187)
T ss_pred             CCcccccccceeEEEEEC-CC--------CCEEEEEEEecCccchhhhhhhhHH--HHHhccCCcchhhhhhHHHHHHHH
Confidence            357899999999999998 56        8999999999765544444333210  111222446677888889999999


Q ss_pred             HHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        119 NLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      ++.++...++.+|+|+.....+|||||++++..+...+...... .++..++.+++.++..+|..+||+|+||||+|||+
T Consensus        70 ~l~~l~~~~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili  148 (187)
T cd05119          70 NLKRLYEAGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV  148 (187)
T ss_pred             HHHHHHHcCCCCCceEecCCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE
Confidence            99999999999999998888999999996322222333332222 56789999999999999943999999999999999


Q ss_pred             eCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccc
Q psy10135        199 HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI  235 (351)
Q Consensus       199 ~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~  235 (351)
                      .++.++|||||.|....+|....++++|+.++++||.
T Consensus       149 ~~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~~~~  185 (187)
T cd05119         149 DDGKVYIIDVPQAVEIDHPNAEEFLRRDVENINRFFR  185 (187)
T ss_pred             ECCcEEEEECcccccccCcchHHHHHHHHHHHHHHhh
Confidence            9889999999999999999999999999999999995

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.94  E-value=2.3e-25  Score=200.97  Aligned_cols=188  Identities=30%  Similarity=0.524  Sum_probs=150.4

Q ss_pred             HHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhh---cccccccccccccccc
Q psy10135         25 MILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD---RDKYVNGEFRFRHGYC  101 (351)
Q Consensus        25 ~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~---~~~yv~ge~Rfr~~~~  101 (351)
                      ..+..+...|..|.+...||+|++|.||+|.. .+        |+.||||+++.+...+..   ..+|+...       .
T Consensus         5 ~~~~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~-~~--------g~~vavK~~~~~~~~~~~~~~~~~~~~~~-------~   68 (198)
T cd05144           5 LALHTLVKRGVVESLGNQIGVGKESDVYLALD-PD--------GNPVALKFHRLGRTSFRKVKRKRDYLGDR-------K   68 (198)
T ss_pred             HHHHHHHHcCchhhcCCccccCcceEEEEEEc-CC--------CCEEEEEEEecccchhhhhcchHHHHhcc-------c
Confidence            35668889999999999999999999999987 56        999999999875433221   11222100       0


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        102 KKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       102 k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      ..+.....+..+..|+.++..+...++.+|.++....+++||||+  .|.++..+...    .....++.+++.++.++|
T Consensus        69 ~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~~~~~lv~e~~--~g~~L~~~~~~----~~~~~~~~~i~~~l~~lh  142 (198)
T cd05144          69 HASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDWNRHAVVMEYI--DGVELYRVRVL----EDPEEVLDEILEEIVKAY  142 (198)
T ss_pred             cchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeecCCceEEEEEe--CCcchhhcccc----ccHHHHHHHHHHHHHHHH
Confidence            012334455567889999999998888999999888899999999  46554443321    345678999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccCCCCChHHHHHhhhhhhhhccc
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI  235 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~  235 (351)
                      + .|++|+||||.|||+. ++.++|||||+|...++++..++|.||..|+..||.
T Consensus       143 ~-~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (198)
T cd05144         143 K-HGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDHPNAEELLDRDVENILRFFR  196 (198)
T ss_pred             H-CCCCcCCCCcccEEEcCCCcEEEEECCccccCCCccHHHHHHHHHHHHHHHHh
Confidence            5 9999999999999995 689999999999999999999999999999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0593|consensus

Probab=99.87  E-value=1.6e-22  Score=192.12  Aligned_cols=147  Identities=18%  Similarity=0.185  Sum_probs=120.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+..+.+|+|+||.||+|+++.+        |+.||||.+.-+.                        --.+++..|.+|
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~T--------gqIVAIKkF~Ese------------------------dd~~VkKIAlRE   51 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDT--------GQIVAIKKFVESE------------------------DDPVVKKIALRE   51 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCc--------ccEEEEEeeccCC------------------------ccHHHHHHHHHH
Confidence            78889999999999999999777        9999999886532                        123677788999


Q ss_pred             HHHHHHhhhCC-CCccccccc-cceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ++.|+.|.+.+ |..-+++.. ++..||+|||  +-..+..|...  +++...++.+..|++.++.++| ++++||||||
T Consensus        52 IrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~--dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH-k~n~IHRDIK  128 (396)
T KOG0593|consen   52 IRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC--DHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCH-KNNCIHRDIK  128 (396)
T ss_pred             HHHHHhcccchHHHHHHHHHhcceeEEEeeec--chHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh-hcCeecccCC
Confidence            99999998776 344444433 4567999999  55555555443  5788889999999999999999 6999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccCCCCC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEHDHPH  218 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~~~p~  218 (351)
                      |+|||+ .+|.++|+|||+|+.+..|.
T Consensus       129 PENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen  129 PENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             hhheEEecCCcEEeccchhhHhhcCCc
Confidence            999999 57999999999998876554

>KOG0595|consensus

Probab=99.87  E-value=8.4e-22  Score=192.99  Aligned_cols=146  Identities=20%  Similarity=0.180  Sum_probs=113.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+...||.|+||.||+|++..+        +..||||.+....+..                        -.+....+
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~~~--------~~~VAIK~i~~~~l~~------------------------k~~e~L~~   58 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHKKS--------GTEVAIKCIAKKKLNK------------------------KLVELLLS   58 (429)
T ss_pred             cceehhhccCcceEEEEEeEeccC--------CceEEeeeehhhccCH------------------------HHHHHHHH
Confidence            388888999999999999999777        8999999887643211                        12334578


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|+.|.+.+| ..-..+.. +..+||||||. +|.+...+.. ..+++..++.+..||+.+|+.|| +.+|||||||
T Consensus        59 Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~-gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~-~~~IiHRDLK  136 (429)
T KOG0595|consen   59 EIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCN-GGDLSDYIRRRGRLPEATARHFMQQLASALQFLH-ENNIIHRDLK  136 (429)
T ss_pred             HHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCC
Confidence            9999999986652 33333333 44579999995 4555555554 37999999999999999999999 6999999999


Q ss_pred             CCceEEeC-------CeEEEEEccccccCC
Q psy10135        193 EYNMLVHK-------ATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~~-------g~l~IIDFG~Av~~~  215 (351)
                      |.|||+..       -.++|.|||+|+.+.
T Consensus       137 PQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen  137 PQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             cceEEeccCCCCCCCceEEecccchhhhCC
Confidence            99999943       258999999998663

>KOG0615|consensus

Probab=99.85  E-value=1.9e-21  Score=190.69  Aligned_cols=151  Identities=17%  Similarity=0.170  Sum_probs=115.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+.+.||+|+||.|-+|....+        |+.|||||+.+....-..         |      ..+  .  ....++
T Consensus       173 ~yii~~~LGsGafg~Vkla~e~~t--------gk~vAiKIi~krk~~~~s---------~------~~~--~--~~~v~~  225 (475)
T KOG0615|consen  173 YYIISKTLGSGAFGLVKLAYEKKT--------GKQVAIKIINKRKSTGCS---------R------AIA--K--TRDVQN  225 (475)
T ss_pred             eeEeeeeecCCceeEEEEEEEccc--------CcEEEeeeeehhhccccc---------c------ccc--c--hhhhHH
Confidence            488999999999999999999777        999999999873221100         0      000  0  112468


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |..+|++|.+++| .+-..+.. ...||||||++ +|....++.. ..+.+..-+.++.||+.++.+|| +.||+|||||
T Consensus       226 EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~-GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH-~~GI~HRDiK  303 (475)
T KOG0615|consen  226 EIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVE-GGELFDKVVANKYLREDLGKLLFKQLLTAVKYLH-SQGIIHRDIK  303 (475)
T ss_pred             HHHHHHhcCCCCEEEEeeeeecCCceEEEEEEec-CccHHHHHHhccccccchhHHHHHHHHHHHHHHH-HcCcccccCC
Confidence            9999999998873 44444433 44589999997 7777666544 34666677899999999999999 6999999999


Q ss_pred             CCceEEeC----CeEEEEEccccccCC
Q psy10135        193 EYNMLVHK----ATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~~----g~l~IIDFG~Av~~~  215 (351)
                      |+|||+..    -.++|.|||+|.-.+
T Consensus       304 PeNILl~~~~e~~llKItDFGlAK~~g  330 (475)
T KOG0615|consen  304 PENILLSNDAEDCLLKITDFGLAKVSG  330 (475)
T ss_pred             cceEEeccCCcceEEEecccchhhccc
Confidence            99999953    379999999997653

>KOG0659|consensus

Probab=99.85  E-value=4e-21  Score=179.89  Aligned_cols=148  Identities=19%  Similarity=0.157  Sum_probs=115.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |...+.||+|.||.||+|.+..+        |+.||||-++.+.  ++             .         -+...+.+|
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t--------~~~VAIKKIkl~~--~k-------------d---------Gi~~talRE   51 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTET--------GKRVAIKKIKLGN--AK-------------D---------GINRTALRE   51 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCC--------CcEEEEEEeeccc--cc-------------c---------CccHHHHHH
Confidence            66778999999999999999777        9999999998741  11             1         123456789


Q ss_pred             HHHHHHhhhCC-CCccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|+.+++.. |..-..+.. .+..||+||+.  ......+++  ..+++.+++.++.+++.++.+|| .+.|+|||||
T Consensus        52 IK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~--tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H-~~~IlHRDlK  128 (318)
T KOG0659|consen   52 IKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP--TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH-SKWILHRDLK  128 (318)
T ss_pred             HHHHHHccCcchhhhhhhccCCCceEEEEEecc--ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHH-hhhhhcccCC
Confidence            99999887654 233333333 34469999995  333334444  45899999999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccCCCCCh
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEHDHPHA  219 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~~~p~a  219 (351)
                      |.|+|+ .+|.++|.|||+|+....|+.
T Consensus       129 PnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen  129 PNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             ccceEEcCCCcEEeecccchhccCCCCc
Confidence            999999 579999999999998876553

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.85  E-value=1.7e-20  Score=185.91  Aligned_cols=161  Identities=16%  Similarity=0.178  Sum_probs=122.0

Q ss_pred             eeeecceeeecCceEEEEEEeCC-CcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGA-NYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~-~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -|.+.++||+|+||.||+|.+.. +        |+.+|||+.........                     .........
T Consensus        19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~--------~~~vAiK~~~~~~~~~~---------------------~~~~~~~~~   69 (365)
T PRK09188         19 RFVETAVLKRDVFSTVERGYFAGDP--------GTARAVRRRVSEVPWWS---------------------KPLARHLAA   69 (365)
T ss_pred             CceEccEEeecCcEEEEEEEEcCCC--------CeEEEEEEecccccccc---------------------cHHHHHHHH
Confidence            49999999999999999998754 4        77789998653110000                     001223356


Q ss_pred             HHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC-CC
Q psy10135        115 KEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL-SE  193 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL-kp  193 (351)
                      +|++.|.+|.+.++ +|..+.....+|||||+.  |..+..+.  ...   ...++.+++.+|.+|| ..||||||| ||
T Consensus        70 ~E~~iL~~L~h~~i-v~~l~~~~~~~LVmE~~~--G~~L~~~~--~~~---~~~~~~~i~~aL~~lH-~~gIiHrDL~KP  140 (365)
T PRK09188         70 REIRALKTVRGIGV-VPQLLATGKDGLVRGWTE--GVPLHLAR--PHG---DPAWFRSAHRALRDLH-RAGITHNDLAKP  140 (365)
T ss_pred             HHHHHHHhccCCCC-CcEEEEcCCcEEEEEccC--CCCHHHhC--ccc---hHHHHHHHHHHHHHHH-HCCCeeCCCCCc
Confidence            89999999988775 455666677899999994  54333221  111   2468899999999999 599999999 99


Q ss_pred             CceEEe-CCeEEEEEccccccCCCCChHHHHH--hhhhhhhhcc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHDHPHALQFLR--KDCDNVTVFV  234 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~--~D~~~v~~ff  234 (351)
                      .|||++ ++.++|||||+|.......+...++  .|+.++..+|
T Consensus       141 ~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~  184 (365)
T PRK09188        141 QNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHK  184 (365)
T ss_pred             ceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccC
Confidence            999994 5789999999999887777777765  8989999888

>KOG0667|consensus

Probab=99.83  E-value=1.8e-20  Score=192.08  Aligned_cols=141  Identities=21%  Similarity=0.250  Sum_probs=109.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|.||.|-+|++..+        ++.|||||+|...              +|-             ..+.-|
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T--------~e~VAIKIiKN~k--------------~f~-------------~Q~~~E  232 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKT--------GEIVAIKIIKNKK--------------RFL-------------RQAQIE  232 (586)
T ss_pred             EEEEEEecccccceeEEEEecCC--------CcEEEEEeeccCh--------------HHH-------------HHHHHH
Confidence            79999999999999999999888        9999999998732              111             113468


Q ss_pred             HHHHHHhhh---CC-CCcccccc---c-cceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        117 MRNLTRMYS---EG-LNVPKPIL---L-KSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       117 ~~nL~rL~~---~g-i~vP~pi~---~-~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      +++|..|..   .+ ..+...++   . +.+|||+|.++  -.++..|+..   +++...++.+..||+.+|..|| ..|
T Consensus       233 i~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~--~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~-~l~  309 (586)
T KOG0667|consen  233 IRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS--TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH-ELG  309 (586)
T ss_pred             HHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh--hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence            999999983   21 22222222   2 44589999994  3344445543   5788899999999999999999 599


Q ss_pred             ccccCCCCCceEEeC---CeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLVHK---ATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi~~---g~l~IIDFG~Av~~~  215 (351)
                      ||||||||+|||+.+   ..+||||||.|...+
T Consensus       310 IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  310 IIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             eeeccCChhheeeccCCcCceeEEecccccccC
Confidence            999999999999943   579999999997553

>KOG0663|consensus

Probab=99.83  E-value=4.7e-21  Score=184.13  Aligned_cols=148  Identities=20%  Similarity=0.276  Sum_probs=114.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+....|++|+||+||+|.+..+        ++.||+|-++...    ..    .       |+         -+.+.+|
T Consensus        78 fe~lnrI~EGtyGiVYRakdk~t--------~eIVALKr~kmek----ek----~-------GF---------PItsLRE  125 (419)
T KOG0663|consen   78 FEKLNRIEEGTYGVVYRAKDKKT--------DEIVALKRLKMEK----EK----E-------GF---------PITSLRE  125 (419)
T ss_pred             HHHHhhcccCcceeEEEeccCCc--------ceeEEeeeccccc----cc----C-------CC---------cchhHHH
Confidence            78889999999999999999777        9999999988742    10    0       11         2335679


Q ss_pred             HHHHHHhhhCCC-Ccccccc---ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL---LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~---~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.++++.+| .+-+++.   ....+||||||..|-..+-.-...++...+++.+..|++.++.+|| .+.|+|||||
T Consensus       126 IniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH-~~wilHRDLK  204 (419)
T KOG0663|consen  126 INILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH-DNWILHRDLK  204 (419)
T ss_pred             HHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh-hceeEecccc
Confidence            999998877664 4444432   2456899999963322111111236888899999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccCCCC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~~~p  217 (351)
                      |.|+|+ +.|.++|+|||+|+..+.|
T Consensus       205 ~SNLLm~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  205 TSNLLLSHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             hhheeeccCCcEEecccchhhhhcCC
Confidence            999999 6799999999999999877

>KOG0661|consensus

Probab=99.83  E-value=5e-21  Score=190.41  Aligned_cols=145  Identities=17%  Similarity=0.202  Sum_probs=112.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|.||.||+|....+        |..||||-++.....                         .-.....+|
T Consensus        12 Y~~i~klGDGTfGsV~la~~~~~--------~~~VAIK~MK~Kf~s-------------------------~ee~~nLRE   58 (538)
T KOG0661|consen   12 YTVIRKLGDGTFGSVYLAKSKET--------GELVAIKKMKKKFYS-------------------------WEECMNLRE   58 (538)
T ss_pred             HHHHHHhcCCcceeEEEeeecCC--------CceeeHHHHHhhhcc-------------------------HHHHHHHHH
Confidence            78889999999999999998776        899999988763211                         112233578


Q ss_pred             HHHHHHhh-hCC-CCccccccc-c-ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMY-SEG-LNVPKPILL-K-SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~-~~g-i~vP~pi~~-~-~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|++|. +.+ |..-++|.. . ..++||||+..+-+.+..-+...+++++++.+..||+.+|.+|| ++|+.|||||
T Consensus        59 vksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiH-k~GfFHRDlK  137 (538)
T KOG0661|consen   59 VKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH-KHGFFHRDLK  137 (538)
T ss_pred             HHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH-hcCcccccCC
Confidence            89999997 444 344444433 2 45799999953333222223346999999999999999999999 6999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+|||+. ..-++|.|||+|++..
T Consensus       138 PENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen  138 PENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             hhheEecccceeEecccccccccc
Confidence            9999997 7889999999999874

>KOG0592|consensus

Probab=99.83  E-value=1.1e-20  Score=190.42  Aligned_cols=145  Identities=21%  Similarity=0.238  Sum_probs=113.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+++.||.|+|+.||+|+...+        ++.|||||+......-.....||.                       .|
T Consensus        75 F~Fg~~lGeGSYStV~~A~~~~t--------~keYAiKVl~K~~Iike~KvkYV~-----------------------~E  123 (604)
T KOG0592|consen   75 FKFGKILGEGSYSTVVLAREKAT--------GKEYAIKVLDKRYIIKEKKVKYVT-----------------------RE  123 (604)
T ss_pred             cchhheeccccceeEEEeeecCC--------CceeeHhhhhHHHHHhhcccchhh-----------------------HH
Confidence            88999999999999999999777        999999999765444333444442                       34


Q ss_pred             HHHHHHh-hhCCCC-ccccc-cccceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRM-YSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL-~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      =..|.+| .++||- .---+ +..+.|+||||+. +|..+..++.. .|++.-++-++.+|+.+|.+|| .+||||||||
T Consensus       124 k~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~-nGdll~~i~K~Gsfde~caR~YAAeIldAleylH-~~GIIHRDlK  201 (604)
T KOG0592|consen  124 KEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP-NGDLLDLIKKYGSFDETCARFYAAEILDALEYLH-SNGIIHRDLK  201 (604)
T ss_pred             HHHHHHhhCCCCeEEEEEEeecccceEEEEEecC-CCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH-hcCceeccCC
Confidence            5567777 445531 10011 1256789999998 88888877764 5888888899999999999999 6999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|||++ +++++|.|||.|..+
T Consensus       202 PENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  202 PENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             hhheeEcCCCcEEEeeccccccC
Confidence            9999995 799999999999755

>KOG0605|consensus

Probab=99.83  E-value=5.2e-21  Score=192.46  Aligned_cols=145  Identities=25%  Similarity=0.225  Sum_probs=106.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+++..||.|+||.||+|.-+.+        |..||||+++.+...-++.-.                   .|+    .|
T Consensus       143 Fe~Lk~IgkGAfGeVrLarKk~T--------g~iyAmK~LkKS~M~~~~Qv~-------------------hV~----aE  191 (550)
T KOG0605|consen  143 FELLKVIGKGAFGEVRLARKKDT--------GEIYAMKILKKSEMLKKNQVE-------------------HVR----AE  191 (550)
T ss_pred             chhheeeccccceeEEEEEEccC--------CcEEeeecccHHHHHhhhhHH-------------------HHH----HH
Confidence            88999999999999999998667        999999999987543332211                   111    12


Q ss_pred             HHHHHHhhhCCCCccccc---c-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPI---L-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi---~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      =.+|.......  +.+.+   . ....||||||++ +|.....|.. ..|++..++.++.+++.|+..|| +.|+|||||
T Consensus       192 RdiL~~~ds~~--vVKLyYsFQD~~~LYLiMEylP-GGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH-~~gyIHRDI  267 (550)
T KOG0605|consen  192 RDILAEVDSPW--VVKLYYSFQDKEYLYLIMEYLP-GGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH-QLGYIHRDI  267 (550)
T ss_pred             HHHhhhcCCCc--EEEEEEEecCCCeeEEEEEecC-CccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH-HcCcccccC
Confidence            23333322211  11111   1 145689999997 5655555543 46888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      ||+|+||+ .|+++|.|||+|.-+.-
T Consensus       268 KPdNlLiD~~GHiKLSDFGLs~gl~~  293 (550)
T KOG0605|consen  268 KPDNLLIDAKGHIKLSDFGLSTGLDK  293 (550)
T ss_pred             ChhheeecCCCCEeeccccccchhhh
Confidence            99999995 69999999999965543

>KOG0616|consensus

Probab=99.83  E-value=3.9e-20  Score=175.38  Aligned_cols=171  Identities=18%  Similarity=0.182  Sum_probs=128.4

Q ss_pred             ccccchhhhhhhhCChhHHHHHHHHHhc-Cc-----eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCC
Q psy10135          6 TKDKHDRATAEQVMDPRTRMILFKLISR-GM-----VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTS   79 (351)
Q Consensus         6 ~~d~~~~~t~~~v~d~rt~~~L~~l~~~-g~-----~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s   79 (351)
                      .+|...+..+.+.+|........+.... +.     -|++...||+|+||.|.+++...+        |..||+|++...
T Consensus         9 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~dfe~~~tlGtGSFGrV~LVr~k~~--------g~yYAmKvL~k~   80 (355)
T KOG0616|consen    9 AKDSNSKESVKEFLDKAREDFPKKWANTPQNPYSLQDFERLKTLGTGSFGRVHLVREKHS--------GNYYAMKVLDKQ   80 (355)
T ss_pred             hccccchhHHHHHHHHHHHhhhhhhcCCCCCCcchhhhhheeeeccCccceEEEEEEccC--------CceeehhhcCHH
Confidence            3466777888888888777776655443 21     278889999999999999999777        999999998763


Q ss_pred             chhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCcccccc-------ccceEEEEcccCccccc
Q psy10135         80 ILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPIL-------LKSHVLLMTFIGEDGWP  152 (351)
Q Consensus        80 ~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~-------~~~~vLVMEfig~~G~~  152 (351)
                      ..+-            .+          .+. ....|-++|+++..     |-++.       ....+|||||++ +|..
T Consensus        81 ~vVk------------lK----------Qve-H~~nEk~vL~~v~~-----PFlv~l~~t~~d~~~lymvmeyv~-GGEl  131 (355)
T KOG0616|consen   81 KVVK------------LK----------QVE-HTHNEKRVLKAVSH-----PFLVKLYGTFKDNSNLYMVMEYVP-GGEL  131 (355)
T ss_pred             HHHH------------HH----------HHH-HHhhHHHHHhhccC-----ceeEEEEEeeccCCeEEEEEeccC-CccH
Confidence            2211            10          010 12345566666553     22222       245689999997 6777


Q ss_pred             cccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        153 AAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       153 ~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ...|+. .++++..++-++.||+.|+++|| .++||+|||||+|||++ +|.++|+|||.|...
T Consensus       132 FS~Lrk~~rF~e~~arFYAAeivlAleylH-~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v  194 (355)
T KOG0616|consen  132 FSYLRKSGRFSEPHARFYAAEIVLALEYLH-SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV  194 (355)
T ss_pred             HHHHHhcCCCCchhHHHHHHHHHHHHHHHH-hcCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence            777765 46999999999999999999999 59999999999999995 799999999999765

>KOG0600|consensus

Probab=99.82  E-value=2.3e-20  Score=186.80  Aligned_cols=145  Identities=17%  Similarity=0.114  Sum_probs=111.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+..+.||+|.||.||+|++..+        |+.||+|-++-...    ..                    ..-..+.+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~t--------gkivALKKvr~d~~----~~--------------------~~~~t~~RE  166 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLET--------GKIVALKKVRFDNE----KE--------------------GFPITAIRE  166 (560)
T ss_pred             HHHHHHhcCcchhheeEeeeccc--------CcEEEEEEeecccC----CC--------------------cchHHHHHH
Confidence            78889999999999999999777        99999998865210    00                    011234579


Q ss_pred             HHHHHHhhhCCCC-cccccc---ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL---LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~---~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|++|.+.+|- .-..+.   .+..|||+||+..|..-+.......++..+++.++.||+.+|.+|| .+||+|||||
T Consensus       167 I~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH-~~gvlHRDIK  245 (560)
T KOG0600|consen  167 IKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH-SRGVLHRDIK  245 (560)
T ss_pred             HHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh-hcCeeecccc
Confidence            9999999887642 222222   2467899999964322222222356899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..|||++ +|.++|.|||+|...
T Consensus       246 ~SNiLidn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  246 GSNILIDNNGVLKIADFGLARFY  268 (560)
T ss_pred             ccceEEcCCCCEEeccccceeec
Confidence            9999995 589999999999844

>KOG0583|consensus

Probab=99.82  E-value=4.7e-20  Score=183.13  Aligned_cols=148  Identities=19%  Similarity=0.214  Sum_probs=114.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+++.||+|+||.||+|.+..+        |..||||++......-.. .                    .......+
T Consensus        18 ~y~~~~~lG~GsfgkV~~a~~~~t--------~~~vAiKii~~~~~~~~~-~--------------------~~~~~i~r   68 (370)
T KOG0583|consen   18 KYELGRTLGSGSFGKVKLAKHRLT--------GEKVAIKIIDRKKVSSKS-Q--------------------KLDELIKR   68 (370)
T ss_pred             ceeeeeeecCCCCeeEEEeeeccC--------CCeEEEEEechhcccccc-c--------------------ccchhhHH
Confidence            499999999999999999988677        899999988764110000 0                    00111237


Q ss_pred             HHHHHHHhh-hCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+.+|+++. +.+| ..-+++.. ...++||||+. +|.++..+.. .++.+.+++.+|.||+.|+.+|| ++|||||||
T Consensus        69 Ei~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~-gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H-~~gi~HRDL  146 (370)
T KOG0583|consen   69 EISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCS-GGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCH-SRGIVHRDL  146 (370)
T ss_pred             HHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecC-CccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHH-hCCEeeCCC
Confidence            899999998 6553 44444443 34679999996 4677776665 67899999999999999999999 599999999


Q ss_pred             CCCceEEe-C-CeEEEEEccccccC
Q psy10135        192 SEYNMLVH-K-ATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~-g~l~IIDFG~Av~~  214 (351)
                      ||+|||++ + +.++|+|||.|...
T Consensus       147 K~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen  147 KPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             CHHHEEecCCCCCEEEecccccccc
Confidence            99999995 4 79999999999755

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=1.5e-19  Score=166.47  Aligned_cols=157  Identities=19%  Similarity=0.294  Sum_probs=117.4

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+...|++|+||.||.+..  .        +.+++.+-+..+....                      +......+.+|+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~--------~~k~~~~~l~~~~~~~----------------------~~~~~~l~~rE~   52 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--G--------ERKFVRRDLSAAPWWL----------------------RGVAWWLARREA   52 (218)
T ss_pred             ccceeecCCCcceEEEeec--C--------Cceeeecccccchhhh----------------------hhHHHHHHHHHH
Confidence            3567899999999998865  3        7788887665432111                      112222467899


Q ss_pred             HHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC-CCCce
Q psy10135        118 RNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL-SEYNM  196 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL-kp~NI  196 (351)
                      ++|.+|.+. ..+|.++....++++|+|+  .|..+....    +. ....++.|++.+|.+|| .+||||||| ||+||
T Consensus        53 ~iL~~L~~~-~~vP~ll~~~~~~lvmeyI--~G~~L~~~~----~~-~~~~~~~qi~~~L~~lH-~~GIvHrDL~kp~NI  123 (218)
T PRK12274         53 LALRQLDGL-PRTPRLLHWDGRHLDRSYL--AGAAMYQRP----PR-GDLAYFRAARRLLQQLH-RCGVAHNDLAKEANW  123 (218)
T ss_pred             HHHHhcCCC-CCCCEEEEEcCEEEEEeee--cCccHHhhh----hh-hhHHHHHHHHHHHHHHH-HCcCccCCCCCcceE
Confidence            999999764 4588898888899999999  565443211    11 12468899999999999 599999999 79999


Q ss_pred             EEe-CCeEEEEEccccccCCCCCh--HHHH-Hhhhhhhhhcccc
Q psy10135        197 LVH-KATLFIIDVAQSVEHDHPHA--LQFL-RKDCDNVTVFVIL  236 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~~~~p~a--~~fl-~~D~~~v~~ff~~  236 (351)
                      |+. +|.++|||||+|.... +.+  ..+| ++|+.|+..||..
T Consensus       124 Lv~~~g~i~LIDFG~A~~~~-~~~~~~r~L~~rDl~~llk~~~~  166 (218)
T PRK12274        124 LVQEDGSPAVIDFQLAVRGN-PRARWMRLLAREDLRHLLKHKRM  166 (218)
T ss_pred             EEcCCCCEEEEECCCceecC-CcchHHHHHHHHHHHHHHHHHHh
Confidence            994 6889999999998544 444  4567 5999999999954

>KOG0598|consensus

Probab=99.82  E-value=2.8e-20  Score=180.36  Aligned_cols=164  Identities=18%  Similarity=0.187  Sum_probs=125.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +++.++||.|+||.||.++...+        ++.||+|+++.....-+..                       ......|
T Consensus        27 F~~lkviGkG~fGkV~~Vrk~dt--------~kiYAmKvl~K~~iv~~~e-----------------------~~~~~~E   75 (357)
T KOG0598|consen   27 FEILKVIGKGSFGKVFQVRKKDT--------GKIYAMKVLKKKKIVEKKE-----------------------VRHTKAE   75 (357)
T ss_pred             eeeeeeeeccCCceEEEEEEccc--------CceeehhhhhhhHhhhhhh-----------------------HHHHHHH
Confidence            88999999999999999998666        9999999998743221111                       1123457


Q ss_pred             HHHHHHhhhCCCCccccccc---cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL---KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~---~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ..+|.++.++- -|.-.+..   ...+||+||+. +|.+...|. +..+++..++-++.+|+.||.+|| +.||||||||
T Consensus        76 r~IL~~v~hPF-iv~l~ysFQt~~kLylVld~~~-GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH-~~gIiyRDlK  152 (357)
T KOG0598|consen   76 RNILSKIKHPF-IVKLIYSFQTEEKLYLVLDYLN-GGELFYHLQREGRFSEDRARFYLAEIVLALGYLH-SKGIIYRDLK  152 (357)
T ss_pred             HHHHHhCCCCc-EeeeEEecccCCeEEEEEeccC-CccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHH-hCCeeeccCC
Confidence            78888876652 22222221   45689999997 677777776 456888889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC-------------CCCChHHHHHhhh-hhhhhcc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH-------------DHPHALQFLRKDC-DNVTVFV  234 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~-------------~~p~a~~fl~~D~-~~v~~ff  234 (351)
                      |+|||++ +|+++|+|||+|...             .+.+|.|.|.+.- ....|||
T Consensus       153 PENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWW  209 (357)
T KOG0598|consen  153 PENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWW  209 (357)
T ss_pred             HHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchH
Confidence            9999995 699999999999743             1456778876654 5677888

>KOG4250|consensus

Probab=99.82  E-value=2.7e-20  Score=192.23  Aligned_cols=145  Identities=21%  Similarity=0.321  Sum_probs=113.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .+...+.||+|+||+||+|++..+        |+.||||.+++.. ..                       +-+..|. +
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnket--------G~~vAvK~~~~~~-~~-----------------------r~~e~~~-~   60 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKET--------GRLVAVKTFNKES-SL-----------------------RPRERWC-R   60 (732)
T ss_pred             ceeehhhhcCCccceeeeeccccc--------ccchhHHhhhhhc-cc-----------------------chHHHHH-H
Confidence            466779999999999999998778        9999999988622 11                       1233443 6


Q ss_pred             HHHHHHHhhhCC----CCcccccc----ccceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMYSEG----LNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~~~g----i~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+.+|++|.+++    +.+|++-.    ....+||||||. +|.....|.+    .+|++.++..+...+..+|++|| .
T Consensus        61 EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~-gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr-E  138 (732)
T KOG4250|consen   61 EIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCS-GGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR-E  138 (732)
T ss_pred             HHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecC-CCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH-H
Confidence            999999998765    34455444    355689999996 5655555554    25999999999999999999999 5


Q ss_pred             CCccccCCCCCceEEeC---Ce--EEEEEccccccCC
Q psy10135        184 CHLVHADLSEYNMLVHK---AT--LFIIDVAQSVEHD  215 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~---g~--l~IIDFG~Av~~~  215 (351)
                      +|||||||||.|||+-.   |+  .+|||||.|++++
T Consensus       139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen  139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             cCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            99999999999999943   32  7899999999875

>KOG0581|consensus

Probab=99.81  E-value=5.5e-20  Score=178.42  Aligned_cols=145  Identities=20%  Similarity=0.223  Sum_probs=109.9

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      +..+.||.|.-|+||+|.+..+        ++.+|+|++....                         ....+....+|+
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t--------~~i~AlK~I~~~~-------------------------~~~~~~Qi~rEl  128 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPT--------GKIYALKVILLNI-------------------------DPALQKQILREL  128 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCC--------CeEEEEEeecccC-------------------------CHHHHHHHHHHH
Confidence            3458999999999999999878        9999999985421                         112233446788


Q ss_pred             HHHHHhhhCC-CCccccccccc--eEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        118 RNLTRMYSEG-LNVPKPILLKS--HVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       118 ~nL~rL~~~g-i~vP~pi~~~~--~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      .+|++..+.. |.+-..+....  ..|+|||++ .|.+..-++. .++++..+..++.+++.+|.+||...+||||||||
T Consensus       129 ~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD-gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKP  207 (364)
T KOG0581|consen  129 EILRSCQSPYIVGFYGAFYSNGEEISICMEYMD-GGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKP  207 (364)
T ss_pred             HHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCH
Confidence            9888775443 23333332222  579999996 4555444544 45888889999999999999999668999999999


Q ss_pred             CceEE-eCCeEEEEEccccccCCC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEHDH  216 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~~~  216 (351)
                      .|||+ ..|.+||+|||.|..+..
T Consensus       208 sNlLvNskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  208 SNLLVNSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             HHeeeccCCCEEeccccccHHhhh
Confidence            99999 569999999999976643

>KOG0594|consensus

Probab=99.80  E-value=1.1e-19  Score=175.28  Aligned_cols=147  Identities=19%  Similarity=0.200  Sum_probs=109.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.....||+|.||.||+|+...+        |+.||+|.++....   +     +|                +-..+.+|
T Consensus        13 ~~~~eklGeGtyg~Vykar~~~~--------g~~VALKkirl~~~---~-----EG----------------~P~taiRE   60 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSKRT--------GKFVALKKIRLEFE---E-----EG----------------VPSTAIRE   60 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEecC--------CCEEEEEEEecccc---c-----cC----------------CCchhhHH
Confidence            55567799999999999999777        99999999987321   1     11                11235679


Q ss_pred             HHHHHHhhhCC-C-Ccccccccc-------ceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        117 MRNLTRMYSEG-L-NVPKPILLK-------SHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       117 ~~nL~rL~~~g-i-~vP~pi~~~-------~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      +..|++|.++. | ..-..+...       ..+|||||+.  -...+.+..     ..++...++.+..||+.+|.+|| 
T Consensus        61 isllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d--~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H-  137 (323)
T KOG0594|consen   61 ISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD--RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH-  137 (323)
T ss_pred             HHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec--ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH-
Confidence            99999997765 2 222233222       4569999994  322222222     24666778999999999999999 


Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccCCCCC
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPH  218 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~  218 (351)
                      ++||+||||||.|||++ .|.++|+|||+|+....|.
T Consensus       138 ~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~  174 (323)
T KOG0594|consen  138 SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM  174 (323)
T ss_pred             hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc
Confidence            59999999999999995 6999999999998766554

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=1.1e-18  Score=157.57  Aligned_cols=142  Identities=22%  Similarity=0.311  Sum_probs=107.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||+|++|.||+|..  .        |..++||+.+.........                  .....+.+..+|+.++
T Consensus         2 ~~l~~G~~~~vy~~~~--~--------~~~~~vK~~~~~~~~~~~~------------------~~~~~~~~~~~E~~~l   53 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--L--------GIKAVIKWRIPKRYRHPEL------------------DERIRRERTRREARIM   53 (211)
T ss_pred             cccccCceEEEEEEee--C--------CCceEEEEeCCcCCcChHH------------------HHHHHHHHHHHHHHHH
Confidence            5789999999999986  3        7789999876532100000                  0112344567899999


Q ss_pred             HHhhhCCCCccccc--cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        121 TRMYSEGLNVPKPI--LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       121 ~rL~~~gi~vP~pi--~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      ..+.+.++++|.++  .....+|||||+  +|.++..+... ... ....++.+++.+|.+|| ..|++|+||+|.|||+
T Consensus        54 ~~l~~~~i~~p~~~~~~~~~~~lv~e~~--~G~~L~~~~~~-~~~-~~~~i~~~i~~~l~~lH-~~~i~H~Dl~p~Nil~  128 (211)
T PRK14879         54 SRARKAGVNVPAVYFVDPENFIIVMEYI--EGEPLKDLINS-NGM-EELELSREIGRLVGKLH-SAGIIHGDLTTSNMIL  128 (211)
T ss_pred             HHHHHCCCCCCeEEEEeCCCCEEEEEEe--CCcCHHHHHHh-ccH-HHHHHHHHHHHHHHHHH-hCCcccCCCCcccEEE
Confidence            99999899999888  456778999999  45444333221 112 66789999999999999 4999999999999999


Q ss_pred             eCCeEEEEEccccccCC
Q psy10135        199 HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       199 ~~g~l~IIDFG~Av~~~  215 (351)
                      .++.++|||||.|....
T Consensus       129 ~~~~~~liDf~~a~~~~  145 (211)
T PRK14879        129 SGGKIYLIDFGLAEFSK  145 (211)
T ss_pred             ECCCEEEEECCcccCCC
Confidence            98899999999987543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.80  E-value=8.5e-19  Score=163.60  Aligned_cols=160  Identities=18%  Similarity=0.251  Sum_probs=115.8

Q ss_pred             HHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCC
Q psy10135         25 MILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKN  104 (351)
Q Consensus        25 ~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n  104 (351)
                      +++.+.++.  -|++.++||.|+||.||++..  +        +..+|||++++...   ..+..+.   +|+       
T Consensus        23 ~~~~~~l~~--~y~~~~~l~~~~f~~v~l~~~--~--------~~~~iiKvf~~~~~---~~~~~~~---~f~-------   77 (232)
T PRK10359         23 EIFDDFLSY--NIKTIKVFRNIDDTKVSLIDT--D--------YGKYILKVFAPKVK---RTERFLK---SFV-------   77 (232)
T ss_pred             HHHHHHhhC--ceEEEEEecCCCceEEEEEec--C--------CCcEEEEEechhcC---chHHHHH---hhh-------
Confidence            444444433  389999999999999999755  3        66899999987432   1111110   111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhhhCCCCccccccc----------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHH
Q psy10135        105 PRKMVRTWAEKEMRNLTRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECV  174 (351)
Q Consensus       105 ~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll  174 (351)
                          ..-..++|++++.+|.+.|+++|..+..          ...+|||||+  +|..+..+.  .++.    ....+++
T Consensus        78 ----~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi--~G~tL~~~~--~~~~----~~~~~i~  145 (232)
T PRK10359         78 ----KGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYI--EGVELNDMP--EISE----DVKAKIK  145 (232)
T ss_pred             ----hhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEE--CCccHHHhh--hccH----HHHHHHH
Confidence                0122578999999999999999987622          3478999999  575554432  1222    3566999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHH
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQF  222 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~f  222 (351)
                      .++..|| +.|++|||+||+|||+.++.++|||||++....++.|.+.
T Consensus       146 ~~l~~lH-~~gi~H~Dikp~Nili~~~gi~liDfg~~~~~~e~~a~d~  192 (232)
T PRK10359        146 ASIESLH-QHGMVSGDPHKGNFIVSKNGLRIIDLSGKRCTAQRKAKDR  192 (232)
T ss_pred             HHHHHHH-HcCCccCCCChHHEEEeCCCEEEEECCCcccccchhhHHH
Confidence            9999999 5999999999999999754499999999988877777544

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.79  E-value=6.1e-19  Score=174.01  Aligned_cols=146  Identities=16%  Similarity=0.140  Sum_probs=108.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        ++.||+|++........                       ........
T Consensus        44 ~y~~~~~lG~G~fg~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~   92 (370)
T cd05621          44 DYDVVKVIGRGAFGEVQLVRHKSS--------QKVYAMKLLSKFEMIKR-----------------------SDSAFFWE   92 (370)
T ss_pred             HCeEEEEEEecCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhh-----------------------hhHHHHHH
Confidence            499999999999999999998666        89999999864211000                       00112345


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |...+..+.+.+| .+...+.. ...++||||+. +|.....+....++...+..++.||+.+|.+|| ..|||||||||
T Consensus        93 e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~-gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH-~~~IvHrDLKp  170 (370)
T cd05621          93 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMP-GGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH-SMGLIHRDVKP  170 (370)
T ss_pred             HHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCC-CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCH
Confidence            7777877766553 22222222 34589999996 455545555556888888999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||.|...
T Consensus       171 ~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         171 DNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             HHEEECCCCCEEEEecccceec
Confidence            999995 689999999998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.79  E-value=1e-18  Score=160.14  Aligned_cols=143  Identities=21%  Similarity=0.246  Sum_probs=108.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||+|+||.||+|.+..+        ++.||+|++.......                        .......+|
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~--------~~~~~~K~~~~~~~~~------------------------~~~~~~~~e   48 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKN--------GQKVAVKIIDKSEIEE------------------------EEREENIRE   48 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTT--------TEEEEEEEEESTTHHH------------------------HHHHHHHHH
T ss_pred             CEEeEEEEeCCCEEEEEEEECCC--------CeEEEEEEeccccccc------------------------cccchhhhh
Confidence            88999999999999999999666        8899999998742111                        111112348


Q ss_pred             HHHHHHhhhCCCCccccc-c-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPI-L-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi-~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..+.++.+.+|.....+ . ....++||||++ .|.....+. ...++...+..++.||+.+|.+||+ .|++|+||||
T Consensus        49 ~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp  126 (260)
T PF00069_consen   49 IKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP-GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHS-KGIVHRDIKP  126 (260)
T ss_dssp             HHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET-TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSG
T ss_pred             hhccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence            899999977664222111 1 244579999995 233333343 4568888999999999999999995 9999999999


Q ss_pred             CceEEe-CCeEEEEEcccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .|||+. ++.++|+|||++..
T Consensus       127 ~NIl~~~~~~~~l~Dfg~~~~  147 (260)
T PF00069_consen  127 ENILLDENGEVKLIDFGSSVK  147 (260)
T ss_dssp             GGEEESTTSEEEESSGTTTEE
T ss_pred             ccccccccccccccccccccc
Confidence            999996 78999999999964

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.79  E-value=5.1e-19  Score=173.18  Aligned_cols=146  Identities=18%  Similarity=0.129  Sum_probs=107.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.....-.                       ........|
T Consensus         3 y~~~~~LG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~E   51 (363)
T cd05628           3 FESLKVIGRGAFGEVRLVQKKDT--------GHVYAMKILRKADMLEK-----------------------EQVGHIRAE   51 (363)
T ss_pred             ceEeEEEEeCCCEEEEEEEECCC--------CCEEEEEEEEHHHHHHh-----------------------hHHHHHHHH
Confidence            78899999999999999998666        89999999975211000                       001123457


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|.++.+..|. ....+.. ...+|||||+. +|.....+. ...++..+++.++.|++.+|.+|| ..|||||||||
T Consensus        52 ~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH-~~givHrDlKp  129 (363)
T cd05628          52 RDILVEADSLWVVKMFYSFQDKLNLYLIMEFLP-GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIH-QLGFIHRDIKP  129 (363)
T ss_pred             HHHHHhCCCCCcceEEEEEecCCeEEEEEcCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecCCCH
Confidence            7788887655421 1111111 34589999995 454444443 346888999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .|||++ ++.++|+|||.|....
T Consensus       130 ~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628         130 DNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             HHeEECCCCCEEEeeccCccccc
Confidence            999994 6899999999987543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0585|consensus

Probab=99.79  E-value=4.8e-19  Score=176.42  Aligned_cols=155  Identities=23%  Similarity=0.226  Sum_probs=114.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||.|.||.|-+|++..+        ++.|||||+....+.    ..|.    .++..    ..+.|---...+|
T Consensus        99 y~l~~eiG~G~yGkVkLar~~~~--------~~l~AiKil~K~~~~----~~~~----~~~~~----a~~~~~~ekv~~E  158 (576)
T KOG0585|consen   99 YELIKEIGSGQYGKVKLARDEVD--------GKLYAIKILPKKELR----RQYG----FPRQP----AMKLMPIEKVRRE  158 (576)
T ss_pred             eehhhhhcCCccceEEEEeecCC--------CcEEEEEeechhhhh----hhcc----ccccc----ccccCcHHHHHHH
Confidence            89999999999999999999666        999999999764321    1111    11111    1111112235689


Q ss_pred             HHHHHHhhhCC-CCcccccc---ccceEEEEcccCcccccccccc-cCC-CCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEG-LNVPKPIL---LKSHVLLMTFIGEDGWPAAKLK-DTP-LTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~g-i~vP~pi~---~~~~vLVMEfig~~G~~~~~L~-~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +.+|++|++.+ |..-++++   ....|||+|||.  .++..... +.+ ++..+++.+++.++.+|.+|| -+||||||
T Consensus       159 IailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s--~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH-~QgiiHRD  235 (576)
T KOG0585|consen  159 IAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCS--KGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLH-YQGIIHRD  235 (576)
T ss_pred             HHHHHhcCCcCeeEEEEeecCcccCceEEEEEecc--CCccccCCCCcccccHHHHHHHHHHHHHHHHHHH-hcCeeccc
Confidence            99999998865 23334443   256789999995  33333322 233 888999999999999999999 59999999


Q ss_pred             CCCCceEE-eCCeEEEEEccccccC
Q psy10135        191 LSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||.|+|+ .+|+++|.|||.|...
T Consensus       236 IKPsNLLl~~~g~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  236 IKPSNLLLSSDGTVKISDFGVSNEF  260 (576)
T ss_pred             cchhheEEcCCCcEEeeccceeeec
Confidence            99999999 4699999999999754

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.78  E-value=2.8e-18  Score=160.64  Aligned_cols=179  Identities=20%  Similarity=0.359  Sum_probs=126.6

Q ss_pred             ceee-ecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhh-ccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         41 GCIS-TGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD-RDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        41 ~~Ig-~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~-~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      ..|| .|+.|.||.+.. .         +..+|||+|+......+- +..|.     |         ....+..+.+|+.
T Consensus        37 ~~lg~~~g~gtv~~v~~-~---------~~~~vlk~~~r~~~i~kv~~~~~~-----~---------~~~~~~r~~rE~~   92 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT-P---------GVNWVLRHYRRGGLIGKLSKDRYL-----F---------TGLERTRAFAEFR   92 (239)
T ss_pred             ceeecCCCCccEEEEEe-C---------CceEEEEEeeEcchHHhhhhhccc-----c---------cchhhhHHHHHHH
Confidence            4677 899999999976 3         678999999754332221 11111     1         0122345678999


Q ss_pred             HHHHhhhCCCCcccccccc--------ceEEEEcccCccccccc-ccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        119 NLTRMYSEGLNVPKPILLK--------SHVLLMTFIGEDGWPAA-KLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~~~--------~~vLVMEfig~~G~~~~-~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ++.+|.+.|+++|.|+...        ..+|||||+. ++..+. .+....++.    ..+.+++.+|.+|| .+||+|+
T Consensus        93 ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~-G~~~L~~~l~~~~l~~----~~~~~i~~~l~~lH-~~GI~Hr  166 (239)
T PRK01723         93 LLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIE-GARDLVALLQEAPLSE----EQWQAIGQLIARFH-DAGVYHA  166 (239)
T ss_pred             HHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecC-CCCCHHHHHhcCCCCH----HHHHHHHHHHHHHH-HCCCCCC
Confidence            9999999999999998651        2359999995 223332 333334443    34678999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCC------C--cHHHHHHhhhh
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS------D--DDEKIFKKWDS  252 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~------~--~~~~~~~~~~~  252 (351)
                      ||||.|||++ ++.++|||||.|.... |  .+|..+|+..+.++|...+.-      .  +..+++++|..
T Consensus       167 Dlkp~NILv~~~~~v~LIDfg~~~~~~-~--~~~~~~nl~rl~rs~~~~~~~~~~~~~~~~~~~~~~~~y~~  235 (239)
T PRK01723        167 DLNAHNILLDPDGKFWLIDFDRGELRT-P--TRWKQANLARLLRSFNKEQGKRPILAFSEQDWQALLAGYQA  235 (239)
T ss_pred             CCCchhEEEcCCCCEEEEECCCcccCC-C--HHHHHHHHHHHHHHHHHHhccCCcccccHHHHHHHHHHHhh
Confidence            9999999996 5789999999997755 4  779999999999999432211      1  15666666654

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=7.9e-19  Score=169.50  Aligned_cols=148  Identities=17%  Similarity=0.162  Sum_probs=109.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.+..+        |+.||||+++.......                       ........|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~e   51 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDKDT--------GQVYAMKVLRKSDMIKR-----------------------NQIAHVRAE   51 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEECCC--------CCEEEEEEEEHHHHhhc-----------------------cHHHHHHHH
Confidence            78999999999999999998666        99999999875321000                       011123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|..+.+.+|. +...+. ....++||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        52 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH-~~giiH~Dlkp  129 (350)
T cd05573          52 RDILADADSPWIVKLYYSFQDEEHLYLVMEYMP-GGDLMNLLIRKDVFPEETARFYIAELVLALDSVH-KLGFIHRDIKP  129 (350)
T ss_pred             HHHHHhcCCCCccchhhheecCCeEEEEEcCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCH
Confidence            7788887765532 111121 245689999995 3443333333 46888889999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCCCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~~p  217 (351)
                      .|||+. ++.++|+|||.|......
T Consensus       130 ~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573         130 DNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             HHeEECCCCCEEeecCCCCccCccc
Confidence            999994 689999999999766443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=6.6e-19  Score=171.60  Aligned_cols=145  Identities=17%  Similarity=0.116  Sum_probs=108.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++......                       .........|
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~-----------------------~~~~~~~~~E   51 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKKDT--------GHIYAMKKLRKSEMLE-----------------------KEQVAHVRAE   51 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEECCC--------CCEEEEEEEEHHHhhh-----------------------hhHHHHHHHH
Confidence            78899999999999999998666        8999999997521100                       0011223568


Q ss_pred             HHHHHHhhhCCCCcc-ccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVP-KPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|..+.+.+|... ..+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+|| ..|||||||||
T Consensus        52 ~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH-~~~ivH~Dlkp  129 (364)
T cd05599          52 RDILAEADNPWVVKLYYSFQDENYLYLIMEYLP-GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIH-KLGYIHRDIKP  129 (364)
T ss_pred             HHHHHhCCCCCCcceEEEEEcCCeEEEEECCCC-CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCH
Confidence            888888876653211 11112 34689999995 444433333 345888899999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.|...
T Consensus       130 ~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599         130 DNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             HHeEECCCCCEEEeecccceec
Confidence            999995 689999999998643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.78  E-value=7.9e-19  Score=172.78  Aligned_cols=143  Identities=15%  Similarity=0.109  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        ++.||||+++.......                       ........|
T Consensus         3 f~~~~~LG~G~~g~Vy~a~~~~~--------~~~~aiK~i~~~~~~~~-----------------------~~~~~~~~E   51 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLARKVDT--------KALYAMKTLRKKDVLLR-----------------------NQVAHVKAE   51 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEEECCC--------CCEEEEEEEeHHHhhhH-----------------------HHHHHHHHH
Confidence            78899999999999999998666        89999999875211100                       011123467


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ..+|.++.+.+| .....+.. ...+|||||+. +|.....+.. ..++...++.++.||+.+|.+|| .+|||||||||
T Consensus        52 ~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH-~~~ivHrDlKp  129 (382)
T cd05625          52 RDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP-GGDMMSLLIRMGIFPEDLARFYIAELTCAVESVH-KMGFIHRDIKP  129 (382)
T ss_pred             HHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCH
Confidence            888888876543 22112222 34589999996 4544444433 35778888899999999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEccccc
Q psy10135        194 YNMLV-HKATLFIIDVAQSV  212 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av  212 (351)
                      .|||+ .+|.++|+|||+|.
T Consensus       130 ~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625         130 DNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             HHEEECCCCCEEEeECCCCc
Confidence            99999 46899999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.78  E-value=8.2e-19  Score=172.10  Aligned_cols=144  Identities=15%  Similarity=0.105  Sum_probs=106.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||.|+||.||+|.+..+        |+.||||+++.......                       ........
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~--------~~~~avK~~~~~~~~~~-----------------------~~~~~~~~   50 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDT--------NALYAMKTLRKADVLMR-----------------------NQAAHVKA   50 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCC--------CCEEEEEEEcHHHHHhh-----------------------hhHHHHHH
Confidence            488999999999999999998666        89999999864211000                       00112346


Q ss_pred             HHHHHHHhhhCCCCc-ccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLNV-PKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~v-P~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |...|.++.+.+|.. ...+. ....+|||||+. +|.....+.. ..++...++.++.||+.+|.+|| ..||||||||
T Consensus        51 E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~-~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivHrDlk  128 (376)
T cd05598          51 ERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP-GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVH-KMGFIHRDIK  128 (376)
T ss_pred             HHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCC
Confidence            888898887665321 11111 144589999995 4444444433 34777888889999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av  212 (351)
                      |.|||+. ++.++|+|||.|.
T Consensus       129 p~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598         129 PDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             HHHEEECCCCCEEEEeCCCCc
Confidence            9999995 6899999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=9.1e-19  Score=172.03  Aligned_cols=142  Identities=20%  Similarity=0.213  Sum_probs=106.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.+..+        |+.||||++..... +..                    ..+  .....|
T Consensus         3 y~~~~~lG~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~-~~~--------------------~~~--~~~~~E   51 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQKKDT--------GKIYAMKTLLKSEM-FKK--------------------DQL--AHVKAE   51 (377)
T ss_pred             ceEeEEEeecCCEEEEEEEECCC--------CCEEEEEEEEHHHH-HHh--------------------HHH--HHHHHH
Confidence            78899999999999999998666        99999999864211 000                    001  123467


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ..+|.++.+.+|  ++.+.    ....+|||||+. +|.....+.. ..++...++.++.|++.+|.+|| .+|||||||
T Consensus        52 ~~il~~l~hp~i--v~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH-~~givHrDl  127 (377)
T cd05629          52 RDVLAESDSPWV--VSLYYSFQDAQYLYLIMEFLP-GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVH-KLGFIHRDI  127 (377)
T ss_pred             HHHHHhCCCCCc--ceEEEEEEcCCeeEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCC
Confidence            888888876653  22222    134689999995 4544444433 45788888899999999999999 599999999


Q ss_pred             CCCceEE-eCCeEEEEEcccccc
Q psy10135        192 SEYNMLV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi-~~g~l~IIDFG~Av~  213 (351)
                      ||.|||+ .++.++|+|||+|..
T Consensus       128 kp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629         128 KPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             CHHHEEECCCCCEEEeecccccc
Confidence            9999999 468999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0575|consensus

Probab=99.78  E-value=6e-19  Score=179.80  Aligned_cols=148  Identities=18%  Similarity=0.149  Sum_probs=114.6

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      .-|..+++||.|+||.||.+++..+        |..||+|++..+.+.- .                      -.+....
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~t--------ge~~A~KvVpk~~l~k-~----------------------~~reKv~   66 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDT--------GEVVAVKVVPKKLLKK-P----------------------KQREKVL   66 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCC--------CcEEEEEEeehHHhcC-c----------------------chHHHHH
Confidence            4699999999999999999999666        9999999997643211 0                      1122235


Q ss_pred             HHHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +|+.+.+.|.+.+| ..-..+.. ...|||.|+|. .|.....++. .++++.+++.+..||+.+|.+|| +.|||||||
T Consensus        67 ~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~-~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH-~~~IiHRDL  144 (592)
T KOG0575|consen   67 NEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCH-RGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLH-SLGIIHRDL  144 (592)
T ss_pred             HHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecC-CccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH-hcCceeccc
Confidence            78999999987652 22222333 44579999996 5655444443 46999999999999999999999 599999999


Q ss_pred             CCCceEEeC-CeEEEEEccccccCC
Q psy10135        192 SEYNMLVHK-ATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~~-g~l~IIDFG~Av~~~  215 (351)
                      |..||++++ -+++|.|||+|....
T Consensus       145 KLGNlfL~~~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen  145 KLGNLFLNENMNVKIGDFGLATQLE  169 (592)
T ss_pred             chhheeecCcCcEEecccceeeeec
Confidence            999999976 599999999998764

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.78  E-value=1.2e-18  Score=165.40  Aligned_cols=143  Identities=15%  Similarity=0.140  Sum_probs=107.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|.+..+        |+.||||+++....  ..                       ......+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~--~~-----------------------~~~~~~~   52 (303)
T cd07869           6 SYEKLEKLGEGSYATVYKGKSKVN--------GKLVALKVIRLQEE--EG-----------------------TPFTAIR   52 (303)
T ss_pred             cceEeeeEEecCCEEEEEEEECCC--------CCEEEEEEeccccc--cc-----------------------cchhHHH
Confidence            388999999999999999998656        89999999864210  00                       0012346


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|+++.+.++. ....+.. ...++||||++  |.....+..  ..++...+..++.||+.+|.+|| ..|||||||
T Consensus        53 E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dl  129 (303)
T cd07869          53 EASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH--TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH-QRYILHRDL  129 (303)
T ss_pred             HHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC--cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCC
Confidence            88899998776642 2222222 34589999995  444433332  34788889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.|...
T Consensus       130 kp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869         130 KPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             CHHHEEECCCCCEEECCCCcceec
Confidence            99999995 688999999998643

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.78  E-value=1e-18  Score=172.31  Aligned_cols=145  Identities=14%  Similarity=0.110  Sum_probs=106.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||.|+||.||+|.+..+        ++.||||+++.....-.                      .. ......
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~--------~~~~aiK~i~~~~~~~~----------------------~~-~~~~~~   50 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDT--------HALYAMKTLRKKDVLNR----------------------NQ-VAHVKA   50 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhh----------------------HH-HHHHHH
Confidence            478899999999999999998666        89999999875211000                      00 112346


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |...|.++.+.+|. ....+. ....+|||||+. +|.....+.. ..++...++.++.||+.+|.+|| ..||||||||
T Consensus        51 E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH-~~givHrDlK  128 (381)
T cd05626          51 ERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP-GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVH-KMGFIHRDIK  128 (381)
T ss_pred             HHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecCCc
Confidence            78888888765532 111121 244689999996 4444333433 35777888899999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ ++.++|+|||+|..
T Consensus       129 p~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626         129 PDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             HHHEEECCCCCEEEeeCcCCcc
Confidence            9999995 68999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.77  E-value=1.2e-18  Score=167.69  Aligned_cols=140  Identities=21%  Similarity=0.219  Sum_probs=103.1

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        |+.||||+++.......                     ...  ....+|...|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~---------------------~~~--~~~~~e~~~l   49 (323)
T cd05571           1 KLLGKGTFGKVILVREKAT--------GKYYAMKILKKEVIIAK---------------------DEV--AHTLTESRVL   49 (323)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhh---------------------HHH--HHHHHHHHHH
Confidence            4699999999999998666        99999999975321100                     001  1124688889


Q ss_pred             HHhhhCCCCcc-ccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLNVP-KPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~vP-~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      .++.+.+|... ..+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.|||
T Consensus        50 ~~l~hp~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~ivHrDlkp~NIl  127 (323)
T cd05571          50 QNTRHPFLTALKYSFQTHDRLCFVMEYAN-GGELFFHLSRERVFSEDRARFYGAEIVSALGYLH-SCDVVYRDLKLENLM  127 (323)
T ss_pred             HhCCCCCCCCEEEEEEcCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeCCCCHHHEE
Confidence            98877654221 12222 44689999996 444433343 345788889999999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEcccccc
Q psy10135        198 VH-KATLFIIDVAQSVE  213 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~  213 (351)
                      ++ ++.++|+|||.|..
T Consensus       128 l~~~~~~kl~DfG~a~~  144 (323)
T cd05571         128 LDKDGHIKITDFGLCKE  144 (323)
T ss_pred             ECCCCCEEEeeCCCCcc
Confidence            94 68899999998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0658|consensus

Probab=99.77  E-value=3.2e-19  Score=172.92  Aligned_cols=143  Identities=17%  Similarity=0.170  Sum_probs=105.8

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      +-|.-.+++|+|+||+||.|...++        ++.+|||-.-..              .|+++                
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~--------~~~vAIKKv~~d--------------~r~kn----------------   65 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRET--------EEEVAIKKVLQD--------------KRYKN----------------   65 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCC--------CceeEEEEecCC--------------CCcCc----------------
Confidence            3578889999999999999998666        899999965431              24433                


Q ss_pred             HHHHHHHHhhhCCCCccccc-cc---c-c--eEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        115 KEMRNLTRMYSEGLNVPKPI-LL---K-S--HVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi-~~---~-~--~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      +|+.+|.++.+.+|-.-..+ ..   . .  ..|||||++  -..+..++     ...++.-.++-+..||..+|++||.
T Consensus        66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP--~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~  143 (364)
T KOG0658|consen   66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP--ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS  143 (364)
T ss_pred             HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch--HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence            58888888876653211111 10   1 1  238999996  33333344     2357777888999999999999995


Q ss_pred             hCCccccCCCCCceEEe--CCeEEEEEccccccC--CCCC
Q psy10135        183 KCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH--DHPH  218 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~--~~p~  218 (351)
                       .||+||||||.|||++  .|.++|+|||.|..+  +.|+
T Consensus       144 -~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn  182 (364)
T KOG0658|consen  144 -HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN  182 (364)
T ss_pred             -cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence             9999999999999995  489999999999765  3444

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.5e-18  Score=167.39  Aligned_cols=145  Identities=21%  Similarity=0.140  Sum_probs=106.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......+                       .......|
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~-----------------------~~~~~~~e   51 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKKDT--------GEIVALKRMKKSLLFKLN-----------------------EVRHVLTE   51 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEECCC--------CCEEEEEEEEHHHHhhhh-----------------------HHHHHHHH
Confidence            78999999999999999998666        899999998753210000                       01123457


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|.++.+.+| .+...+.. ...+|||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        52 ~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp  129 (333)
T cd05600          52 RDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVP-GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALH-ELGYIHRDLKP  129 (333)
T ss_pred             HHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCH
Confidence            888888866553 22112222 34579999995 3433333332 35788889999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.|...
T Consensus       130 ~Nil~~~~~~~kL~Dfg~a~~~  151 (333)
T cd05600         130 ENFLIDASGHIKLTDFGLSKGI  151 (333)
T ss_pred             HHEEECCCCCEEEEeCcCCccc
Confidence            999994 689999999998653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.77  E-value=1.7e-18  Score=170.73  Aligned_cols=146  Identities=16%  Similarity=0.135  Sum_probs=107.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        ++.||+|+++.......                       ........
T Consensus        44 ~y~i~~~lG~G~fg~Vy~~~~~~~--------~~~~aiK~i~~~~~~~~-----------------------~~~~~~~~   92 (371)
T cd05622          44 DYEVVKVIGRGAFGEVQLVRHKST--------RKVYAMKLLSKFEMIKR-----------------------SDSAFFWE   92 (371)
T ss_pred             hcEEEEEEeecCCeEEEEEEECCC--------CcEEEEEEEEHHHhhhh-----------------------HHHHHHHH
Confidence            499999999999999999998666        89999999864211000                       00111235


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |...+..+.+.+| .+...+.. ...++||||++ +|.....+....++...+..++.||+.+|.+|| .+|||||||||
T Consensus        93 e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~-gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDLkp  170 (371)
T cd05622          93 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP-GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH-SMGFIHRDVKP  170 (371)
T ss_pred             HHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC-CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HCCEEeCCCCH
Confidence            6777777766543 22112212 34579999996 454444455556888888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.|...
T Consensus       171 ~NIll~~~~~ikL~DfG~a~~~  192 (371)
T cd05622         171 DNMLLDKSGHLKLADFGTCMKM  192 (371)
T ss_pred             HHEEECCCCCEEEEeCCceeEc
Confidence            999994 689999999998654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.77  E-value=1.7e-18  Score=170.58  Aligned_cols=145  Identities=17%  Similarity=0.172  Sum_probs=108.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |..||||+++.....  .                    . ........|
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~--~--------------------~-~~~~~~~~e   93 (370)
T cd05596          45 FDVIKVIGRGAFGEVQLVRHKSS--------KQVYAMKLLSKFEMI--K--------------------R-SDSAFFWEE   93 (370)
T ss_pred             cEEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhh--h--------------------h-hhHHHHHHH
Confidence            89999999999999999998666        899999998642110  0                    0 001112457


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      ...|..+.+.+|. ....+.. ...+|||||+. +|.....+....++...+..++.||+.+|.+|| ..|||||||||.
T Consensus        94 ~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~-gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDLkp~  171 (370)
T cd05596          94 RDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMP-GGDLVNLMSNYDIPEKWARFYTAEVVLALDAIH-SMGFIHRDVKPD  171 (370)
T ss_pred             HHHHHhCCCCCcceEEEEEecCCEEEEEEcCCC-CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHH
Confidence            7888888766532 2222222 34579999996 455544555566888888889999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||++ ++.++|+|||.|...
T Consensus       172 NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         172 NMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             HEEEcCCCCEEEEeccceeec
Confidence            99995 689999999998654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0611|consensus

Probab=99.77  E-value=3e-19  Score=175.20  Aligned_cols=144  Identities=22%  Similarity=0.290  Sum_probs=116.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|+|.+.||.|.||.|-+|..+..        |+.||||.++....  ++.                   ..|+.  ..+
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~s--------gR~VAiKsIrKdkI--kde-------------------qDlvh--IRR  102 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKS--------GREVAIKSIRKDKI--KDE-------------------QDLVH--IRR  102 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccC--------CcEeehhhhhhhhc--ccH-------------------HHHHH--HHH
Confidence            389999999999999999998777        99999999886422  111                   11222  457


Q ss_pred             HHHHHHHhhhCC-CCcccccccc-ceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEG-LNVPKPILLK-SHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~g-i~vP~pi~~~-~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+++|..|.+.. |.+-++|... ..+|||||.. .|.++..+.. ..|++.+++.+|+||+.++.++| ++++||||||
T Consensus       103 EIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS-~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCH-knrVvHRDLK  180 (668)
T KOG0611|consen  103 EIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYAS-GGELYDYISERGSLSEREARHFFRQIVSAVHYCH-KNRVVHRDLK  180 (668)
T ss_pred             HHHHHhhcCCCceeehhhhhcCCceEEEEEEecC-CccHHHHHHHhccccHHHHHHHHHHHHHHHHHHh-hccceecccc
Confidence            999999997765 5666666554 4579999996 5666555543 46999999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av  212 (351)
                      .+|||++ ++.++|.|||+|-
T Consensus       181 LENILLD~N~NiKIADFGLSN  201 (668)
T KOG0611|consen  181 LENILLDQNNNIKIADFGLSN  201 (668)
T ss_pred             hhheeecCCCCeeeeccchhh
Confidence            9999995 6899999999984

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.77  E-value=1.7e-18  Score=166.01  Aligned_cols=142  Identities=16%  Similarity=0.159  Sum_probs=106.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |..||||+++....   ..                   ..  .....+|
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~---~~-------------------~~--~~~~~~E   49 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHT--------GEKVAIKKINDVFE---HV-------------------SD--ATRILRE   49 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCC--------CCEEEEEEechhhc---cc-------------------hh--HHHHHHH
Confidence            78999999999999999998666        89999998864210   00                   00  1123578


Q ss_pred             HHHHHHhhhCCCC-cccccc------ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL------LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~------~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|.+|.+.+|. +...+.      ....++||||++  +.....+.. ..++...+..++.||+.+|.+|| .+||||
T Consensus        50 ~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH  126 (338)
T cd07859          50 IKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME--SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIH-TANVFH  126 (338)
T ss_pred             HHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC--CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH-HCCeec
Confidence            9999999776532 221111      123589999995  433333332 35888889999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |||||.|||+. ++.++|+|||.|..
T Consensus       127 ~dlkp~NIll~~~~~~kL~Dfg~~~~  152 (338)
T cd07859         127 RDLKPKNILANADCKLKICDFGLARV  152 (338)
T ss_pred             CCCCHHHeEECCCCcEEEccCccccc
Confidence            99999999995 68999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.77  E-value=2e-18  Score=166.74  Aligned_cols=145  Identities=17%  Similarity=0.128  Sum_probs=108.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....  . .                    ........|
T Consensus        20 y~~~~~lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~--~-~--------------------~~~~~~~~E   68 (329)
T PTZ00263         20 FEMGETLGTGSFGRVRIAKHKGT--------GEYYAIKCLKKREIL--K-M--------------------KQVQHVAQE   68 (329)
T ss_pred             eEEEEEEEecCCeEEEEEEECCC--------CCEEEEEEEEHHHHh--h-h--------------------hhHHHHHHH
Confidence            89999999999999999998666        899999998752110  0 0                    001123568


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|.++.+.+|. +...+. ....++||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        69 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~dlkp  146 (329)
T PTZ00263         69 KSILMELSHPFIVNMMCSFQDENRVYFLLEFVV-GGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLH-SKDIIYRDLKP  146 (329)
T ss_pred             HHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCC-CChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCH
Confidence            8889998776532 211222 245689999995 3444444433 35788888889999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||.|...
T Consensus       147 ~NIll~~~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263        147 ENLLLDNKGHVKVTDFGFAKKV  168 (329)
T ss_pred             HHEEECCCCCEEEeeccCceEc
Confidence            999994 689999999998754

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.77  E-value=1.3e-18  Score=167.38  Aligned_cols=144  Identities=18%  Similarity=0.136  Sum_probs=102.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.||||+++........                     ....  ...|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~~---------------------~~~~--l~~e   49 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKT--------GELYAIKALKKGDIIARD---------------------EVES--LMCE   49 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhhh---------------------HHHH--HHHH
Confidence            67899999999999999998666        899999999753211000                     0001  1223


Q ss_pred             HHHH---HHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNL---TRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL---~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      .+.+   .++.+.+| .+...+.. ...+|||||+. +|.....+....++...+..++.||+.+|.+|| ..|+|||||
T Consensus        50 ~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH-~~~ivHrdl  127 (324)
T cd05589          50 KRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAA-GGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLH-ENKIVYRDL  127 (324)
T ss_pred             HHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCC-CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecCC
Confidence            3333   34444432 12222222 44689999995 444444444556888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||.|||+. ++.++|+|||.|..
T Consensus       128 kp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05589         128 KLDNLLLDTEGFVKIADFGLCKE  150 (324)
T ss_pred             CHHHeEECCCCcEEeCcccCCcc
Confidence            99999994 68999999998764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.77  E-value=1.7e-18  Score=163.45  Aligned_cols=142  Identities=15%  Similarity=0.133  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.+..+        +..||||+++.....  .                       ......+|
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~--~-----------------------~~~~~~~E   53 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLT--------ENLVALKEIRLEHEE--G-----------------------APCTAIRE   53 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCC--------CCEEEEEEecccccC--C-----------------------cchhHHHH
Confidence            88999999999999999998666        899999998753100  0                       00123468


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.+|. +...+.. ...++||||++  |.....+..  ..++...+..++.||+.+|.+|| .+||||||||
T Consensus        54 ~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~dlk  130 (288)
T cd07871          54 VSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD--SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH-KRKILHRDLK  130 (288)
T ss_pred             HHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC--cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCC
Confidence            8999999776532 1112212 33579999994  544333332  23677888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       131 p~Nil~~~~~~~kl~DfG~~~~~  153 (288)
T cd07871         131 PQNLLINEKGELKLADFGLARAK  153 (288)
T ss_pred             HHHEEECCCCCEEECcCcceeec
Confidence            9999995 689999999998643

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.77  E-value=1.7e-18  Score=169.14  Aligned_cols=145  Identities=17%  Similarity=0.150  Sum_probs=106.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......                       ........|
T Consensus         3 f~~~~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~e   51 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQKKDT--------GHIYAMKILRKADMLEK-----------------------EQVAHIRAE   51 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHHhhh-----------------------hhHHHHHHH
Confidence            78889999999999999998666        89999999975211000                       001123457


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|..+.+.++ .....+.. ...+|||||+. +|.....+. ...++...+..++.|++.+|.+|| ..|||||||||
T Consensus        52 ~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH-~~givHrDLkp  129 (360)
T cd05627          52 RDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP-GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIH-QLGFIHRDIKP  129 (360)
T ss_pred             HHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC-CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEccCCCH
Confidence            778888765543 11111222 34589999995 444444443 345888889999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.|...
T Consensus       130 ~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627         130 DNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             HHEEECCCCCEEEeeccCCccc
Confidence            999994 689999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.7e-18  Score=163.93  Aligned_cols=145  Identities=17%  Similarity=0.128  Sum_probs=106.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....  ..                     .......+|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~--~~---------------------~~~~~~~~E   51 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDRIS--------EHYYALKVMAIPEVI--RL---------------------KQEQHVHNE   51 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEcCC--------CCEEEEEEEEHHHHh--hh---------------------HHHHHHHHH
Confidence            78899999999999999998666        899999998752110  00                     001123468


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.++.+.+|. +-..+. ....++||||+. +|.....+.. ..++...+..++.|++.+|.+|| ..|++||||||
T Consensus        52 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp  129 (291)
T cd05612          52 KRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVP-GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLH-SKEIVYRDLKP  129 (291)
T ss_pred             HHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCH
Confidence            8888888766532 111111 234579999995 4443333332 35788888999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.+...
T Consensus       130 ~NIli~~~~~~kl~Dfg~~~~~  151 (291)
T cd05612         130 ENILLDKEGHIKLTDFGFAKKL  151 (291)
T ss_pred             HHeEECCCCCEEEEecCcchhc
Confidence            999995 689999999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.76  E-value=2.3e-18  Score=165.67  Aligned_cols=144  Identities=17%  Similarity=0.184  Sum_probs=103.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        ++.||||+++........                      . ......|
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~avK~~~~~~~~~~~----------------------~-~~~~~~e   50 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGT--------DELYAIKILKKDVIIQDD----------------------D-VECTMVE   50 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCC--------CCEEEEEEEEHHHhhhhh----------------------H-HHHHHHH
Confidence            78899999999999999998666        889999999753210000                      0 0112346


Q ss_pred             HHHHHHhhhCC-CC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEG-LN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~g-i~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      .+.|..+.+.. +. ....+. ....++||||+. +|.....+.. ..++...+..++.||+.+|.+|| ..||||||||
T Consensus        51 ~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~-~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dlk  128 (324)
T cd05587          51 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN-GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLH-SKGIIYRDLK  128 (324)
T ss_pred             HHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCC
Confidence            67777665432 21 111222 234679999995 3444333332 35788888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.|..
T Consensus       129 p~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05587         129 LDNVMLDAEGHIKIADFGMCKE  150 (324)
T ss_pred             HHHeEEcCCCCEEEeecCccee
Confidence            9999995 68899999998864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.76  E-value=3e-18  Score=164.81  Aligned_cols=145  Identities=19%  Similarity=0.208  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.......                       ........|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~e   51 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREKAT--------GDIYAMKVMKKSVLLAQ-----------------------ETVSFFEEE   51 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEECCC--------CCEEEEEEEEHHHhhhh-----------------------hHHHHHHHH
Confidence            78899999999999999998666        99999999975311000                       011123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.+..+. +...+. ....+|||||+. +|.....+..  ..++...+..++.||+.+|.+|| ..||+|||||
T Consensus        52 ~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH-~~~i~H~Dlk  129 (330)
T cd05601          52 RDILSISNSPWIPQLQYAFQDKDNLYLVMEYQP-GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH-QMGYVHRDIK  129 (330)
T ss_pred             HHHHHhCCCCCCcceeeEEecCCeEEEEECCCC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEcccCc
Confidence            7777777655432 111221 234689999995 3444333433  35888888899999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       130 p~NIll~~~~~~kL~Dfg~a~~~  152 (330)
T cd05601         130 PENVLIDRTGHIKLADFGSAARL  152 (330)
T ss_pred             hHheEECCCCCEEeccCCCCeEC
Confidence            9999995 689999999998654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.76  E-value=3.1e-18  Score=164.80  Aligned_cols=141  Identities=20%  Similarity=0.175  Sum_probs=102.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        |+.||||+++.......                     ..  ......|.+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~--------~~~~a~K~~~~~~~~~~---------------------~~--~~~~~~e~~~l   49 (325)
T cd05594           1 KLLGKGTFGKVILVKEKAT--------GRYYAMKILKKEVIVAK---------------------DE--VAHTLTENRVL   49 (325)
T ss_pred             CeeeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhh---------------------hH--HHHHHHHHHHH
Confidence            4699999999999998666        99999999975211000                     00  11224577888


Q ss_pred             HHhhhCCCCcc-ccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLNVP-KPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~vP-~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      ..+.+.+|... ..+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+||...|||||||||.|||
T Consensus        50 ~~~~hp~i~~~~~~~~~~~~~~lv~E~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIl  128 (325)
T cd05594          50 QNSRHPFLTALKYSFQTHDRLCFVMEYAN-GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM  128 (325)
T ss_pred             HhCCCCCCCceEEEEEcCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEE
Confidence            88876654221 12222 34689999996 444433333 2357888899999999999999994379999999999999


Q ss_pred             Ee-CCeEEEEEcccccc
Q psy10135        198 VH-KATLFIIDVAQSVE  213 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~  213 (351)
                      ++ ++.++|+|||.|..
T Consensus       129 l~~~~~~kL~Dfg~~~~  145 (325)
T cd05594         129 LDKDGHIKITDFGLCKE  145 (325)
T ss_pred             ECCCCCEEEecCCCCee
Confidence            94 68899999998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0032|consensus

Probab=99.76  E-value=1.5e-18  Score=172.93  Aligned_cols=148  Identities=19%  Similarity=0.169  Sum_probs=115.9

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -.|++...||.|.||.||+|....+        |+.+|+|+++.......                       .......
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~t--------g~~~A~K~i~k~~~~~~-----------------------~~~~~v~   83 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKST--------GKEVACKVIPKRKLRGK-----------------------EDREDVR   83 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCC--------CceeEEEEeehhhcccc-----------------------ccHHHHH
Confidence            3699999999999999999999777        99999999976332111                       0223456


Q ss_pred             HHHHHHHHhh--hCCCCccccccccc-eEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        115 KEMRNLTRMY--SEGLNVPKPILLKS-HVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       115 kE~~nL~rL~--~~gi~vP~pi~~~~-~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +|+.+|++|.  ...|..+..+.... .+||||++. +|....++....+++.++..+..|++.++++|| .+|+|||||
T Consensus        84 ~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~-GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH-~~gvvHrDl  161 (382)
T KOG0032|consen   84 REVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE-GGELFDRIVKKHYSERDAAGIIRQILEAVKYLH-SLGVVHRDL  161 (382)
T ss_pred             HHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC-CchHHHHHHHccCCHHHHHHHHHHHHHHHHHHH-hCCceeccC
Confidence            8999999995  33456666665544 469999996 555555443324899999999999999999999 599999999


Q ss_pred             CCCceEEe---C--CeEEEEEccccccCC
Q psy10135        192 SEYNMLVH---K--ATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~---~--g~l~IIDFG~Av~~~  215 (351)
                      ||+|+|+.   +  +.++++|||+|+...
T Consensus       162 KpEN~L~~~~~~~~~~ik~~DFGla~~~~  190 (382)
T KOG0032|consen  162 KPENLLLASKDEGSGRIKLIDFGLAKFIK  190 (382)
T ss_pred             CHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence            99999993   2  479999999998654

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.76  E-value=3.9e-18  Score=160.80  Aligned_cols=145  Identities=18%  Similarity=0.145  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......                       ........|
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~-----------------------~~~~~~~~E   50 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRAT--------GKMYACKKLEKKRIKKR-----------------------KGEAMALNE   50 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecC--------CceEEEEEeeHhhhhhh-----------------------hhHHHHHHH
Confidence            67889999999999999998666        99999999875321100                       011223468


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+..+ .....+.. ...++||||+. .|.....+.   ...++...+..++.|++.+|.+|| ..|||||||
T Consensus        51 ~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~iiH~di  128 (285)
T cd05631          51 KRILEKVNSRFVVSLAYAYETKDALCLVLTIMN-GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ-RERIVYRDL  128 (285)
T ss_pred             HHHHHhcCCCcEEEEEEEEccCCeEEEEEEecC-CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCC
Confidence            889998876543 22222222 34679999995 343322222   235778888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.|...
T Consensus       129 kp~Nill~~~~~~kl~Dfg~~~~~  152 (285)
T cd05631         129 KPENILLDDRGHIRISDLGLAVQI  152 (285)
T ss_pred             CHHHEEECCCCCEEEeeCCCcEEc
Confidence            99999995 588999999998653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.76  E-value=3.4e-18  Score=165.31  Aligned_cols=140  Identities=19%  Similarity=0.184  Sum_probs=102.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        |+.||||+++.......                     ..  .....+|+..|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~--------~~~~avK~~~~~~~~~~---------------------~~--~~~~~~E~~~l   49 (328)
T cd05593           1 KLLGKGTFGKVILVREKAS--------GKYYAMKILKKEVIIAK---------------------DE--VAHTLTESRVL   49 (328)
T ss_pred             CeeeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhh---------------------hH--HHHHHHHHHHH
Confidence            3689999999999998666        99999999975321000                     00  11234678888


Q ss_pred             HHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      +.+.+.+|. +...+. ....+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| ..|||||||||.|||
T Consensus        50 ~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~-~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDikp~NIl  127 (328)
T cd05593          50 KNTRHPFLTSLKYSFQTKDRLCFVMEYVN-GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLH-SGKIVYRDLKLENLM  127 (328)
T ss_pred             HhCCCCCCcceEEEEEcCCEEEEEEeCCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecccCHHHeE
Confidence            888776542 212222 244689999996 4444333432 35788889999999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEcccccc
Q psy10135        198 VH-KATLFIIDVAQSVE  213 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~  213 (351)
                      +. ++.++|+|||.|..
T Consensus       128 l~~~~~~kL~DfG~~~~  144 (328)
T cd05593         128 LDKDGHIKITDFGLCKE  144 (328)
T ss_pred             ECCCCcEEEecCcCCcc
Confidence            95 68999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.76  E-value=5.8e-18  Score=162.97  Aligned_cols=148  Identities=18%  Similarity=0.198  Sum_probs=104.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.....     ...|+.||||+++.....  ..                    .........|
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~aiK~~~~~~~~--~~--------------------~~~~~~~~~e   54 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTG-----HDTGKLYAMKVLQKAALV--QK--------------------AKTVEHTRTE   54 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEccc-----CCCCCEEEEEEEEHHHHh--hh--------------------hhHHHHHHHH
Confidence            78999999999999999976221     012889999998752110  00                    0011123467


Q ss_pred             HHHHHHhh-hCCCCcc-cccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMY-SEGLNVP-KPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~-~~gi~vP-~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++. +.+|... ..+. ....+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+||||||||
T Consensus        55 ~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivHrDlk  132 (332)
T cd05614          55 RNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVS-GGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLH-KLGIVYRDIK  132 (332)
T ss_pred             HHHHHhccCCCCcccEEEEEecCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCC
Confidence            78888874 3333211 1111 134579999995 4444444433 45888889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.|..
T Consensus       133 p~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614         133 LENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             HHHeEECCCCCEEEeeCcCCcc
Confidence            9999994 68999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.76  E-value=6.9e-18  Score=158.09  Aligned_cols=143  Identities=17%  Similarity=0.185  Sum_probs=106.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        ++.||||+++......                        .......+|
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~avK~~~~~~~~~------------------------~~~~~~~~E   50 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHKET--------KEIVAIKKFKDSEENE------------------------EVKETTLRE   50 (287)
T ss_pred             ceEEEEecccCCEEEEEEEECCC--------CcEEEEEEEecccccc------------------------cchhhHHHH
Confidence            78999999999999999999666        8999999987532100                        001123458


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.+| .....+.. ...+|||||++  |..+..+..  ..++...+..++.|++.+|.+|| ..|++|+|||
T Consensus        51 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dlk  127 (287)
T cd07848          51 LKMLRTLKQENIVELKEAFRRRGKLYLVFEYVE--KNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCH-KNDIVHRDIK  127 (287)
T ss_pred             HHHHHhCCCccccchhhhEecCCEEEEEEecCC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCC
Confidence            888888876653 22222222 34589999995  333333322  35788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       128 p~Nill~~~~~~kl~Dfg~~~~~  150 (287)
T cd07848         128 PENLLISHNDVLKLCDFGFARNL  150 (287)
T ss_pred             HHHEEEcCCCcEEEeeccCcccc
Confidence            9999994 688999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=5.3e-18  Score=164.00  Aligned_cols=145  Identities=17%  Similarity=0.127  Sum_probs=104.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|....+        ++.||||+++.... .+.                      ........|
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~-~~~----------------------~~~~~~~~e   51 (331)
T cd05597           3 FEILKVIGRGAFGEVAVVKMKNT--------GQVYAMKILNKWEM-LKR----------------------AETACFREE   51 (331)
T ss_pred             ceEEEEEEecCCeEEEEEEECCC--------CCEEEEEEEEHHHH-hhh----------------------hhHHHHHHH
Confidence            78999999999999999998666        89999999864210 000                      001112356


Q ss_pred             HHHHHHhhhCCCCc-cccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLNV-PKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.+.+|.. -..+.. ...+|||||+. +|.....+..  ..++...+..++.||+.+|.+|| ..||||||||
T Consensus        52 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlk  129 (331)
T cd05597          52 RDVLVNGDRRWITNLHYAFQDENNLYLVMDYYV-GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH-QLGYVHRDIK  129 (331)
T ss_pred             HHHHHhCCCCCCCceEEEEecCCeEEEEEecCC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEECCCC
Confidence            77777776654321 111112 34589999995 3444333432  35788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       130 p~Nill~~~~~~kl~Dfg~~~~~  152 (331)
T cd05597         130 PDNVLLDKNGHIRLADFGSCLRL  152 (331)
T ss_pred             HHHEEECCCCCEEEEECCceeec
Confidence            9999994 689999999998643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.75  E-value=4.6e-18  Score=165.80  Aligned_cols=143  Identities=16%  Similarity=0.132  Sum_probs=105.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |..||||+++......                        .......+
T Consensus        22 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~------------------------~~~~~~~~   69 (359)
T cd07876          22 RYQQLKPIGSGAQGIVCAAFDTVL--------GINVAVKKLSRPFQNQ------------------------THAKRAYR   69 (359)
T ss_pred             ceEEEEEeecCCCEEEEEEEEcCC--------CceeEEEEecccccch------------------------hHHHHHHH
Confidence            389999999999999999998666        8999999986431100                        00112346


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|..+.+.+| .+...+..       ...++||||++  |.....+ ...++...+..++.||+.+|.+|| .+|||
T Consensus        70 E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~-~~~~~~~~~~~~~~qi~~~L~~LH-~~~iv  145 (359)
T cd07876          70 ELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD--ANLCQVI-HMELDHERMSYLLYQMLCGIKHLH-SAGII  145 (359)
T ss_pred             HHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC--cCHHHHH-hccCCHHHHHHHHHHHHHHHHHHH-hCCcc
Confidence            8888888876653 22222211       23589999995  4332222 235777888899999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.|...
T Consensus       146 HrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         146 HRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             cCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            999999999994 689999999998643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00284 protein kinase; Provisional

Probab=99.75  E-value=1.1e-17  Score=169.68  Aligned_cols=141  Identities=16%  Similarity=0.164  Sum_probs=101.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|.+..+        ++.||||+++....       +                    ......
T Consensus       130 ~y~i~~~lG~G~fg~V~~a~~~~~--------~~~vAvK~i~~~~~-------~--------------------~~~~~~  174 (467)
T PTZ00284        130 RFKILSLLGEGTFGKVVEAWDRKR--------KEYCAVKIVRNVPK-------Y--------------------TRDAKI  174 (467)
T ss_pred             cEEEEEEEEeccCEEEEEEEEcCC--------CeEEEEEEEecchh-------h--------------------HHHHHH
Confidence            489999999999999999998666        88999999864210       0                    001234


Q ss_pred             HHHHHHHhhhCCC----Ccccccc-----ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        116 EMRNLTRMYSEGL----NVPKPIL-----LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       116 E~~nL~rL~~~gi----~vP~pi~-----~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |+..+..+....+    .++..+.     ....||||+++|  |..+..+. ...++...+..++.||+.+|.+||.++|
T Consensus       175 e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g--~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g  252 (467)
T PTZ00284        175 EIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYG--PCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH  252 (467)
T ss_pred             HHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccC--CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            6666666654432    1222221     134689999995  43433333 3468888899999999999999995479


Q ss_pred             ccccCCCCCceEEeC-C----------------eEEEEEcccccc
Q psy10135        186 LVHADLSEYNMLVHK-A----------------TLFIIDVAQSVE  213 (351)
Q Consensus       186 lVH~DLkp~NILi~~-g----------------~l~IIDFG~Av~  213 (351)
                      ||||||||.|||+.. +                .++|+|||.+..
T Consensus       253 IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        253 LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence            999999999999953 3                499999998754

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.75  E-value=5.8e-18  Score=163.71  Aligned_cols=145  Identities=18%  Similarity=0.164  Sum_probs=102.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        ++.||||+++.......                      .. ......|
T Consensus         3 y~i~~~lG~G~fg~V~~~~~~~~--------~~~~aiK~~~~~~~~~~----------------------~~-~~~~~~e   51 (331)
T cd05624           3 FEIIKVIGRGAFGEVAVVKMKHT--------ERIYAMKILNKWEMLKR----------------------AE-TACFREE   51 (331)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEeHHHHHhh----------------------HH-HHHHHHH
Confidence            78999999999999999998666        89999999864210000                      00 0112345


Q ss_pred             HHHHHHhhhCCCCcc-cccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLNVP-KPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.+.+|... ..+. ....+|||||+. +|.....+..  ..++...+..++.|++.+|.+|| ..||+|||||
T Consensus        52 ~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~-gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH-~~~iiHrDlk  129 (331)
T cd05624          52 RNVLVNGDCQWITTLHYAFQDENYLYLVMDYYV-GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH-QLHYVHRDIK  129 (331)
T ss_pred             HHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCc
Confidence            555665554442211 1111 244579999995 4444444433  45788888899999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       130 p~Nill~~~~~~kl~DfG~a~~~  152 (331)
T cd05624         130 PDNVLLDMNGHIRLADFGSCLKM  152 (331)
T ss_pred             hHHEEEcCCCCEEEEeccceeec
Confidence            9999994 688999999988643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.75  E-value=3.9e-18  Score=164.37  Aligned_cols=140  Identities=19%  Similarity=0.176  Sum_probs=102.6

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        |..||||+++......+                     . . ......|+..|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~---------------------~-~-~~~~~~E~~~l   49 (323)
T cd05595           1 KLLGKGTFGKVILVREKAT--------GRYYAMKILRKEVIIAK---------------------D-E-VAHTVTESRVL   49 (323)
T ss_pred             CeeeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhh---------------------H-H-HHHHHHHHHHH
Confidence            4699999999999998666        99999999975321100                     0 0 11123588888


Q ss_pred             HHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      .++.+.+|. +...+.. ...+|||||++ +|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.|||
T Consensus        50 ~~l~hp~i~~~~~~~~~~~~~~lv~E~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dlkp~NIl  127 (323)
T cd05595          50 QNTRHPFLTALKYAFQTHDRLCFVMEYAN-GGELFFHLSRERVFTEERARFYGAEIVSALEYLH-SRDVVYRDIKLENLM  127 (323)
T ss_pred             HhCCCCCCcceeeEEecCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHEE
Confidence            888776532 2222222 44689999996 444433333 235788889999999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEcccccc
Q psy10135        198 VH-KATLFIIDVAQSVE  213 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~  213 (351)
                      +. ++.++|+|||.|..
T Consensus       128 l~~~~~~kL~Dfg~~~~  144 (323)
T cd05595         128 LDKDGHIKITDFGLCKE  144 (323)
T ss_pred             EcCCCCEEecccHHhcc
Confidence            95 58899999998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.75  E-value=8.3e-18  Score=162.09  Aligned_cols=144  Identities=18%  Similarity=0.185  Sum_probs=102.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++........                      . ......|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~----------------------~-~~~~~~e   50 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGT--------DELYAIKILKKDVVIQDD----------------------D-VECTMVE   50 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhhh----------------------H-HHHHHHH
Confidence            56789999999999999998666        899999998752110000                      0 0112345


Q ss_pred             HHHHHHhhhCC-CC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEG-LN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~g-i~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.+.. +. ....+.. ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+|+||||||
T Consensus        51 ~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~-~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH-~~~ivHrDik  128 (323)
T cd05615          51 KRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN-GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLH-RRGIIYRDLK  128 (323)
T ss_pred             HHHHHhccCCCchhheeeEEecCCEEEEEEcCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCC
Confidence            66666654332 21 1111222 34679999995 4444434433 45888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.|..
T Consensus       129 p~Nill~~~~~ikL~Dfg~~~~  150 (323)
T cd05615         129 LDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             HHHeEECCCCCEEEeccccccc
Confidence            9999995 68899999998864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.74  E-value=8.2e-18  Score=161.75  Aligned_cols=144  Identities=17%  Similarity=0.176  Sum_probs=101.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||+|+||.||+|.+..+        ++.||||+++........                     .  ......|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~~---------------------~--~~~~~~e   50 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGT--------DELYAIKILKKDVVIQDD---------------------D--VECTMVE   50 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhhh---------------------H--HHHHHHH
Confidence            67889999999999999998666        889999998753210000                     0  0112234


Q ss_pred             HHHHHHhhh-CCCC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYS-EGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~-~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.. ..+. ....+.. ...+|||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+||||||||
T Consensus        51 ~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~-~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlk  128 (323)
T cd05616          51 KRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN-GGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH-SKGIIYRDLK  128 (323)
T ss_pred             HHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCEEecCCC
Confidence            555555432 2221 1111111 34579999996 4544433332 45788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ ++.++|+|||.|..
T Consensus       129 p~Nill~~~~~~kL~DfG~~~~  150 (323)
T cd05616         129 LDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             HHHeEECCCCcEEEccCCCcee
Confidence            9999995 68999999998864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.74  E-value=1.1e-17  Score=159.36  Aligned_cols=143  Identities=14%  Similarity=0.129  Sum_probs=105.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        +..||||.++.....  .                       ......+
T Consensus         7 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~--~-----------------------~~~~~~~   53 (309)
T cd07872           7 TYIKLEKLGEGTYATVFKGRSKLT--------ENLVALKEIRLEHEE--G-----------------------APCTAIR   53 (309)
T ss_pred             ceEEEEEecccCCEEEEEEEecCC--------CCeEEEEEeeccccC--C-----------------------cchhHHH
Confidence            389999999999999999998556        889999998753110  0                       0011235


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..+.++.+.++ .+...+. ....++||||++  +.....+..  ..++...+..++.||+.+|.+|| .+|||||||
T Consensus        54 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH-~~~ivH~dl  130 (309)
T cd07872          54 EVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD--KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH-RRKVLHRDL  130 (309)
T ss_pred             HHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCC
Confidence            8888988876653 2222221 245689999995  444333332  23677888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.|...
T Consensus       131 kp~Nill~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872         131 KPQNLLINERGELKLADFGLARAK  154 (309)
T ss_pred             CHHHEEECCCCCEEECccccceec
Confidence            99999995 688999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.74  E-value=1.7e-17  Score=161.43  Aligned_cols=143  Identities=16%  Similarity=0.166  Sum_probs=104.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        ++.||||+++......                        .......+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~~~   65 (355)
T cd07874          18 RYQNLKPIGSGAQGIVCAAYDAVL--------DRNVAIKKLSRPFQNQ------------------------THAKRAYR   65 (355)
T ss_pred             ceeEEEEeeecCCEEEEEEEecCC--------CceEEEEEeCCcccCh------------------------HHHHHHHH
Confidence            388999999999999999998656        8999999886421100                        00111235


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|+.+.+.+| .+...+.       ....++||||++  |.....+ ...++...+..++.|++.+|.+|| +.|||
T Consensus        66 E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~-~~~l~~~~~~~~~~qi~~aL~~LH-~~giv  141 (355)
T cd07874          66 ELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD--ANLCQVI-QMELDHERMSYLLYQMLCGIKHLH-SAGII  141 (355)
T ss_pred             HHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc--ccHHHHH-hhcCCHHHHHHHHHHHHHHHHHHH-hCCcc
Confidence            7777887766553 2222221       123589999994  4332222 235778888899999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.|...
T Consensus       142 HrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874         142 HRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             cCCCChHHEEECCCCCEEEeeCcccccC
Confidence            999999999995 689999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=3.2e-17  Score=147.52  Aligned_cols=175  Identities=19%  Similarity=0.280  Sum_probs=122.1

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|++|++|.||.+.. .         |.++++|.-.+.               +.|+   +.--.++.+....+|+++|
T Consensus         2 ~~i~~GAEa~i~~~~~-~---------g~~av~K~Ri~K---------------~YR~---p~LD~klrr~Rt~~Earil   53 (204)
T COG3642           2 DLIKQGAEAIIYLTDF-L---------GLPAVVKERIPK---------------RYRH---PELDEKLRRERTRREARIL   53 (204)
T ss_pred             chhhCCcceeEEeeec-c---------CcceEEEeecCc---------------ccCC---hHHHHHHHHHHHHHHHHHH
Confidence            4689999999999966 2         677888863321               1111   0111345666778999999


Q ss_pred             HHhhhCCCCccccccc--cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        121 TRMYSEGLNVPKPILL--KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      .+++.+||++|..+..  ....|+||||  +|.++...-...     ...++..+...+..|| ++||||+||.+.||++
T Consensus        54 ~~a~~~GV~~P~v~dvD~~~~~I~me~I--~G~~lkd~l~~~-----~~~~~r~vG~~vg~lH-~~givHGDLTtsNiIl  125 (204)
T COG3642          54 AKAREAGVPVPIVYDVDPDNGLIVMEYI--EGELLKDALEEA-----RPDLLREVGRLVGKLH-KAGIVHGDLTTSNIIL  125 (204)
T ss_pred             HHHHHcCCCCCeEEEEcCCCCEEEEEEe--CChhHHHHHHhc-----chHHHHHHHHHHHHHH-hcCeecCCCccceEEE
Confidence            9999999999999876  4557999999  575543211111     2468899999999999 6999999999999999


Q ss_pred             eCCeEEEEEccccccCCCCChHHHHHhhhhhhhhcc-ccCCCCCc-HHHHHHhhhhcC
Q psy10135        199 HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV-ILNPVSDD-DEKIFKKWDSDY  254 (351)
Q Consensus       199 ~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff-~~~~~~~~-~~~~~~~~~~~~  254 (351)
                      .++++++||||++...+   ..+=+-.|+..+.+=+ .+.+.... ...++++|.+..
T Consensus       126 ~~~~i~~IDfGLg~~s~---~~Ed~aVDl~Vleral~sth~~~e~l~~~f~~gY~~~~  180 (204)
T COG3642         126 SGGRIYFIDFGLGEFSD---EVEDKAVDLHVLERALESTHEKAEELFAAFLEGYREEF  180 (204)
T ss_pred             eCCcEEEEECCcccccc---cHHhhhchHHHHHHHHHhccccHHHHHHHHHHHHHHHh
Confidence            99999999999996443   3333444544333222 23333222 677788876654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.74  E-value=1.8e-17  Score=148.42  Aligned_cols=138  Identities=25%  Similarity=0.370  Sum_probs=101.6

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .||+|++|.||+|..  +        |..+++|+.....  ++...                ...........+|+.++.
T Consensus         1 ~ig~G~~~~vy~~~~--~--------~~~~viK~~~~~~--~~~~~----------------~~~~~~~~~~~~E~~~l~   52 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--L--------GLKAVIKERVPKS--YRHPE----------------LDERIRRERTRNEARLLS   52 (199)
T ss_pred             CCCCCceEEEEEeec--C--------CccEEEEEecCCc--CcCch----------------HHHHHHHHHHHHHHHHHH
Confidence            489999999999985  4        7899999865421  00000                001112234568999999


Q ss_pred             HhhhCCCCcccccccc--ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe
Q psy10135        122 RMYSEGLNVPKPILLK--SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH  199 (351)
Q Consensus       122 rL~~~gi~vP~pi~~~--~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~  199 (351)
                      +|...|+++|.++...  ..+|||||+  +|.++..+....    .. .++.+++.+|.+|| ..|++|+|++|.|||++
T Consensus        53 ~l~~~~i~~p~~~~~~~~~~~lv~e~~--~g~~l~~~~~~~----~~-~~~~~i~~~l~~lH-~~gi~H~Dl~~~Nil~~  124 (199)
T TIGR03724        53 RARKAGVNTPVVYDVDPDNKTIVMEYI--EGKPLKDVIEEG----ND-ELLREIGRLVGKLH-KAGIVHGDLTTSNIIVR  124 (199)
T ss_pred             HHHHCCCCCCEEEEEECCCCEEEEEEE--CCccHHHHHhhc----HH-HHHHHHHHHHHHHH-HCCeecCCCCcceEEEE
Confidence            9999999999987653  448999999  454433221110    11 78999999999999 59999999999999999


Q ss_pred             CCeEEEEEccccccCC
Q psy10135        200 KATLFIIDVAQSVEHD  215 (351)
Q Consensus       200 ~g~l~IIDFG~Av~~~  215 (351)
                      ++++++||||.|....
T Consensus       125 ~~~~~liDfg~a~~~~  140 (199)
T TIGR03724       125 DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CCcEEEEECCCCcCCC
Confidence            8999999999986543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.74  E-value=1.9e-17  Score=162.36  Aligned_cols=142  Identities=14%  Similarity=0.136  Sum_probs=104.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||.+....   .+                   .  .......+|
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~---~~-------------------~--~~~~~~~~E   49 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRD--------GKRVALKKMPNVF---QN-------------------L--VSCKRVFRE   49 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCC--------CCEEEEEeccccc---cc-------------------h--HHHHHHHHH
Confidence            57889999999999999998556        8999999875421   00                   0  011234568


Q ss_pred             HHHHHHhhhCCC-Cccccccc------cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL------KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~------~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|..+.+.+| .+...+..      ...++||||++  +.....+. ...++...+..++.||+.+|.+|| ..|+||
T Consensus        50 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivH  126 (372)
T cd07853          50 LKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ--SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLH-SAGILH  126 (372)
T ss_pred             HHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc--cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeC
Confidence            888888877653 22111111      14589999995  33333332 345888899999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |||||.|||+. ++.++|+|||.|..
T Consensus       127 ~dlkp~Nili~~~~~~kL~Dfg~a~~  152 (372)
T cd07853         127 RDIKPGNLLVNSNCVLKICDFGLARV  152 (372)
T ss_pred             CCCChHHEEECCCCCEEeccccceee
Confidence            99999999995 58999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=9.8e-18  Score=160.45  Aligned_cols=138  Identities=17%  Similarity=0.179  Sum_probs=101.5

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||+|+||.||+|.+..+        ++.||||+++.......                       ........|...|.+
T Consensus         1 lg~G~~g~Vy~~~~~~~--------~~~~aiK~i~~~~~~~~-----------------------~~~~~~~~E~~~l~~   49 (312)
T cd05585           1 IGKGSFGKVMQVRKRDT--------QRIYALKTIRKAHIVSR-----------------------SEVTHTLAERTVLAQ   49 (312)
T ss_pred             CCcCCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhh-----------------------hHHHHHHHHHHHHHh
Confidence            79999999999998666        89999999875211000                       001123468888888


Q ss_pred             hhhCCCC-cccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe
Q psy10135        123 MYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH  199 (351)
Q Consensus       123 L~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~  199 (351)
                      +.+.+|. ....+. ....+|||||+. .|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.|||+.
T Consensus        50 l~h~~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~HrDlkp~Nili~  127 (312)
T cd05585          50 VNCPFIVPLKFSFQSPEKLYLVLAFIN-GGELFHHLQREGRFDLSRARFYTAELLCALENLH-KFNVIYRDLKPENILLD  127 (312)
T ss_pred             CCCCcEeceeeEEecCCeEEEEEcCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeCCCCHHHeEEC
Confidence            8766532 112222 245689999995 444444443 345888888999999999999999 59999999999999994


Q ss_pred             -CCeEEEEEcccccc
Q psy10135        200 -KATLFIIDVAQSVE  213 (351)
Q Consensus       200 -~g~l~IIDFG~Av~  213 (351)
                       ++.++|+|||.|..
T Consensus       128 ~~~~~kl~Dfg~~~~  142 (312)
T cd05585         128 YQGHIALCDFGLCKL  142 (312)
T ss_pred             CCCcEEEEECccccc
Confidence             68999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.74  E-value=1.7e-17  Score=161.71  Aligned_cols=140  Identities=19%  Similarity=0.193  Sum_probs=103.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||++.....                         ........+|
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~-------------------------~~~~~~~~~E  122 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPT--------GRLYALKVIYGNHE-------------------------DTVRRQICRE  122 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCC--------CCEEEEEEEecCCc-------------------------HHHHHHHHHH
Confidence            56778999999999999998666        89999999864210                         0111223578


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +.+|.++.+.+| .+...+.. ...++||||+.  |..+..  ...+....+..++.||+.+|.+|| .+|||||||||.
T Consensus       123 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~~L~~--~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~  197 (353)
T PLN00034        123 IEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD--GGSLEG--THIADEQFLADVARQILSGIAYLH-RRHIVHRDIKPS  197 (353)
T ss_pred             HHHHHhCCCCCcceeeeEeccCCeEEEEEecCC--CCcccc--cccCCHHHHHHHHHHHHHHHHHHH-HCCEeecCCCHH
Confidence            899999877653 22222222 34579999994  322221  113455667889999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||+. ++.++|+|||.+...
T Consensus       198 NIll~~~~~~kL~DfG~~~~~  218 (353)
T PLN00034        198 NLLINSAKNVKIADFGVSRIL  218 (353)
T ss_pred             HEEEcCCCCEEEcccccceec
Confidence            99995 588999999998654

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=1.4e-17  Score=165.94  Aligned_cols=135  Identities=11%  Similarity=0.099  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|.+..+        ++.||||.....                                ...+
T Consensus        93 ~y~~~~~lg~G~~g~V~~~~d~~~--------~~~vaiK~~~~~--------------------------------~~~~  132 (391)
T PHA03212         93 GFSILETFTPGAEGFAFACIDNKT--------CEHVVIKAGQRG--------------------------------GTAT  132 (391)
T ss_pred             CcEEEEEEcCCCCeEEEEEEECCC--------CCEEEEechhhh--------------------------------hhHH
Confidence            499999999999999999999666        899999963210                                1246


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.+|.+.+| .+...+.. ...++|||+++  |.....+.. ..++..++..++.||+.+|.+|| .+||||||||
T Consensus       133 E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH-~~~IvHrDiK  209 (391)
T PHA03212        133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK--TDLYCYLAAKRNIAICDILAIERSVLRAIQYLH-ENRIIHRDIK  209 (391)
T ss_pred             HHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCC
Confidence            8899999987764 22222222 34579999995  444444432 35788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.|..
T Consensus       210 P~NIll~~~~~vkL~DFG~a~~  231 (391)
T PHA03212        210 AENIFINHPGDVCLGDFGAACF  231 (391)
T ss_pred             hHhEEEcCCCCEEEEeCCcccc
Confidence            9999995 68899999999853

>KOG0580|consensus

Probab=99.74  E-value=1e-18  Score=161.66  Aligned_cols=148  Identities=20%  Similarity=0.220  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      ++|++.||.|+||+||.|+...+        +-.||+||+-.+.........      .+         ++.+.+.+.--
T Consensus        24 feigr~LgkgkFG~vYlarekks--------~~IvalKVlfKsqi~~~~v~~------ql---------rREiEIqs~L~   80 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREKKS--------LFIVALKVLFKSQILKTQVEH------QL---------RREIEIQSHLR   80 (281)
T ss_pred             ccccccccCCccccEeEeeeccC--------CcEEEEeeeeHHHHHHhcchh------hh---------hheeEeecccC
Confidence            78999999999999999998777        889999998654321111110      01         11111111111


Q ss_pred             HHHHHHhhhCCCCccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ++|+-||+..      .++..+.||++||.+ +|..+..|.+   .++++..+..+..|++.|+.+|| .+++|||||||
T Consensus        81 hpnilrlY~~------fhd~~riyLilEya~-~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h-~k~VIhRdiKp  152 (281)
T KOG0580|consen   81 HPNILRLYGY------FHDSKRIYLILEYAP-RGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH-LKRVIHRDIKP  152 (281)
T ss_pred             CccHHhhhhh------eeccceeEEEEEecC-CchHHHHHHhcccccccccchhHHHHHHHHHHHHhc-cCCcccCCCCH
Confidence            2334444432      123356789999998 8888777764   34778888999999999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEccccccCC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      +|+|+ ..|.++|.|||-||...
T Consensus       153 enlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  153 ENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             HHhccCCCCCeeccCCCceeecC
Confidence            99999 57999999999998654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.73  E-value=2.1e-17  Score=158.53  Aligned_cols=140  Identities=16%  Similarity=0.161  Sum_probs=97.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH-HH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM-RN  119 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~-~n  119 (351)
                      +.||.|+||.||+|.+..+        |+.||||++.........                      .... ...|. ..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~~----------------------~~~~-~~~e~~~~   49 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSD--------GSFYAVKVLQKKTILKKK----------------------EQNH-IMAERNVL   49 (321)
T ss_pred             CeeeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHHHHhh----------------------HHHH-HHHHHHHH
Confidence            4699999999999998666        899999998753211000                      0011 11232 34


Q ss_pred             HHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        120 LTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       120 L~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ++.+.+.+|. +...+. ....+|||||++ +|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.||
T Consensus        50 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~ivH~Dlkp~NI  127 (321)
T cd05603          50 LKNLKHPFLVGLHYSFQTAEKLYFVLDYVN-GGELFFHLQRERCFLEPRARFYAAEVASAIGYLH-SLNIIYRDLKPENI  127 (321)
T ss_pred             HHhCCCCCccceeeEEEcCCEEEEEEcCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHHHe
Confidence            5556555432 111111 245689999996 344433333 245778888899999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 ll~~~~~~kl~Dfg~~~~  145 (321)
T cd05603         128 LLDSQGHVVLTDFGLCKE  145 (321)
T ss_pred             EECCCCCEEEccCCCCcc
Confidence            995 68999999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2.1e-17  Score=155.80  Aligned_cols=145  Identities=18%  Similarity=0.144  Sum_probs=107.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        ++.||||+++.....  .                     ........+|
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~--~---------------------~~~~~~~~~E   50 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRAT--------GKMYACKKLEKKRIK--K---------------------RKGEAMALNE   50 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCC--------CceEEEEEEehhhhh--h---------------------hhhHHHHHHH
Confidence            78889999999999999998666        899999998753211  0                     0112234568


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+| +....+.. ...++||||+. .|.....+.   ...++...+..++.|++.+|.+|| ..|+||+||
T Consensus        51 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dl  128 (285)
T cd05605          51 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMN-GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH-RERIVYRDL  128 (285)
T ss_pred             HHHHHhcCCCCEeeeeeeecCCCeEEEEEeccC-CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH-HCCcEecCC
Confidence            889999876553 22222222 34689999995 343332332   235788888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       129 kp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05605         129 KPENILLDDYGHIRISDLGLAVEI  152 (285)
T ss_pred             CHHHEEECCCCCEEEeeCCCceec
Confidence            99999995 588999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0192|consensus

Probab=99.73  E-value=1.3e-17  Score=165.17  Aligned_cols=141  Identities=20%  Similarity=0.190  Sum_probs=105.4

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcE-EEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKE-FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~-vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      +...||+|+||.||+|.. .         |.. ||||++......-.                      .  .....+|+
T Consensus        45 ~~~~iG~G~~g~V~~~~~-~---------g~~~vavK~~~~~~~~~~----------------------~--~~~f~~E~   90 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKW-R---------GTDVVAVKIISDPDFDDE----------------------S--RKAFRREA   90 (362)
T ss_pred             hhhhcccCCceeEEEEEe-C---------CceeEEEEEecchhcChH----------------------H--HHHHHHHH
Confidence            445699999999999998 3         566 99999986321100                      0  22345799


Q ss_pred             HHHHHhhhCCC-Ccccccccc--ceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCC-ccccC
Q psy10135        118 RNLTRMYSEGL-NVPKPILLK--SHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCH-LVHAD  190 (351)
Q Consensus       118 ~nL~rL~~~gi-~vP~pi~~~--~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~g-lVH~D  190 (351)
                      ..|.+|.+.+| ...-.....  ..+|||||+. .|.....|.   ...++...+..++.+|+.+|.+|| .++ |||||
T Consensus        91 ~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~-~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH-~~~~iIHrD  168 (362)
T KOG0192|consen   91 SLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP-GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH-SEGPIIHRD  168 (362)
T ss_pred             HHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC-CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh-cCCCeeecc
Confidence            99999987763 222222222  4689999997 565544443   356888899999999999999999 589 99999


Q ss_pred             CCCCceEEeC-C-eEEEEEccccccCC
Q psy10135        191 LSEYNMLVHK-A-TLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~~-g-~l~IIDFG~Av~~~  215 (351)
                      |||.|||++. . +++|+|||.|....
T Consensus       169 LK~~NiLv~~~~~~~KI~DFGlsr~~~  195 (362)
T KOG0192|consen  169 LKSDNILVDLKGKTLKIADFGLSREKV  195 (362)
T ss_pred             cChhhEEEcCCCCEEEECCCccceeec
Confidence            9999999964 4 89999999996543

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.73  E-value=1.3e-17  Score=162.58  Aligned_cols=146  Identities=18%  Similarity=0.112  Sum_probs=105.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+...       .+..||||+++.......                      ... .....|
T Consensus        32 y~~~~~ig~G~~g~Vy~a~~~~~-------~~~~vavK~~~~~~~~~~----------------------~~~-~~~~~E   81 (340)
T PTZ00426         32 FNFIRTLGTGSFGRVILATYKNE-------DFPPVAIKRFEKSKIIKQ----------------------KQV-DHVFSE   81 (340)
T ss_pred             cEEEEEEeecCCeEEEEEEEECC-------CCeEEEEEEEEHHHhhhh----------------------hhH-HHHHHH
Confidence            88999999999999999986333       146899999864211000                      001 113468


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|..+.+.+|. ....+.. ...+|||||+. .|.....+. ...++...+..++.||+.+|.+|| ..|+|||||||
T Consensus        82 ~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~-~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDLkp  159 (340)
T PTZ00426         82 RKILNYINHPFCVNLYGSFKDESYLYLVLEFVI-GGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQ-SLNIVYRDLKP  159 (340)
T ss_pred             HHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEccCCCH
Confidence            8889888766532 2212222 34579999995 444444443 345788888999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.|...
T Consensus       160 ~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        160 ENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             HHEEECCCCCEEEecCCCCeec
Confidence            999994 688999999998654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.73  E-value=1.6e-17  Score=160.07  Aligned_cols=146  Identities=16%  Similarity=0.120  Sum_probs=100.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.....   .....+..||||+++.... .                        .......+|
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~-~------------------------~~~~~~~~E   60 (338)
T cd05102           9 LRLGKVLGHGAFGKVVEASAFGI---DKKSSCNTVAVKMLKEGAT-A------------------------SEHKALMSE   60 (338)
T ss_pred             ceeeeEeccCCcceEEEEEEecc---CCcccchhhheeccccccc-h------------------------HHHHHHHHH
Confidence            78999999999999999974111   0001157899999875210 0                        001123568


Q ss_pred             HHHHHHh-hhCCCCcccccc---c--cceEEEEcccCcccccccccc---------------------------------
Q psy10135        117 MRNLTRM-YSEGLNVPKPIL---L--KSHVLLMTFIGEDGWPAAKLK---------------------------------  157 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~---~--~~~vLVMEfig~~G~~~~~L~---------------------------------  157 (351)
                      +..|.++ .+.+|  ...+.   .  ...++||||+. .|.....+.                                 
T Consensus        61 ~~~l~~l~~h~ni--v~~~~~~~~~~~~~~lv~ey~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (338)
T cd05102          61 LKILIHIGNHLNV--VNLLGACTKPNGPLMVIVEFCK-YGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRI  137 (338)
T ss_pred             HHHHHHhccCcce--eeEEeEecCCCCceEEEEecCC-CCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcccccc
Confidence            8888888 44442  22222   1  23579999996 343322111                                 


Q ss_pred             ------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEE
Q psy10135        158 ------------------------------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFII  206 (351)
Q Consensus       158 ------------------------------~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~II  206 (351)
                                                    ..+++..++..++.||+.+|.+|| ..|||||||||.|||++ ++.++|+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDiKp~Nil~~~~~~~kl~  216 (338)
T cd05102         138 EAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLA-SRKCIHRDLAARNILLSENNVVKIC  216 (338)
T ss_pred             ccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHH-HCCEECCCCccceEEEcCCCcEEEe
Confidence                                          013566677889999999999999 59999999999999995 6889999


Q ss_pred             EccccccC
Q psy10135        207 DVAQSVEH  214 (351)
Q Consensus       207 DFG~Av~~  214 (351)
                      |||.|...
T Consensus       217 DfG~a~~~  224 (338)
T cd05102         217 DFGLARDI  224 (338)
T ss_pred             eccccccc
Confidence            99998653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.73  E-value=1.6e-17  Score=159.62  Aligned_cols=140  Identities=16%  Similarity=0.176  Sum_probs=98.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|.+..+        |+.||||+++........                       .......|.+.|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~~-----------------------~~~~~~~e~~il   49 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGT--------DEVYAIKVLKKDVILQDD-----------------------DVDCTMTEKRIL   49 (321)
T ss_pred             CccccCCCeEEEEEEECCC--------CCEEEEEEEeHHHhhhhh-----------------------HHHHHHHHHHHH
Confidence            3689999999999998666        899999998753110000                       001123466666


Q ss_pred             HHhh-hCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ..+. +.+| .+...+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.||
T Consensus        50 ~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDikp~Ni  127 (321)
T cd05591          50 ALAAKHPFLTALHCCFQTKDRLFFVMEYVN-GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLH-RHGVIYRDLKLDNI  127 (321)
T ss_pred             HhccCCCCccceeeEEEcCCeEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHe
Confidence            6552 3332 11112222 34689999995 444433333 235788888999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |++ ++.++|+|||.|..
T Consensus       128 ll~~~~~~kL~Dfg~~~~  145 (321)
T cd05591         128 LLDAEGHCKLADFGMCKE  145 (321)
T ss_pred             EECCCCCEEEeeccccee
Confidence            995 68999999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=1.2e-17  Score=161.39  Aligned_cols=144  Identities=16%  Similarity=0.164  Sum_probs=107.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.+..+        ++.||||+++......                        .......+
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~------------------------~~~~~~~~   63 (343)
T cd07878          16 RYQNLTPVGSGAYGSVCSAYDTRL--------RQKVAVKKLSRPFQSL------------------------IHARRTYR   63 (343)
T ss_pred             hhhhheecccCCCeEEEEEEECCC--------CCEEEEEEeCchhhhh------------------------HHHHHHHH
Confidence            488999999999999999998666        8999999986531110                        00112346


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|+++.+.+| .+...+.       ....+++|+++|  +.....+....++...+..++.||+.+|.+|| ..|||
T Consensus        64 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~iv  140 (343)
T cd07878          64 ELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMG--ADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIH-SAGII  140 (343)
T ss_pred             HHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCC--CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCee
Confidence            8888888876553 2222221       133579999984  43333344456889999999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.|...
T Consensus       141 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878         141 HRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             cccCChhhEEECCCCCEEEcCCccceec
Confidence            999999999995 689999999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.73  E-value=2.6e-17  Score=160.76  Aligned_cols=142  Identities=16%  Similarity=0.162  Sum_probs=103.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        ++.||||+++.......                        ......+|
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~------------------------~~~~~~~E   73 (364)
T cd07875          26 YQNLKPIGSGAQGIVCAAYDAIL--------ERNVAIKKLSRPFQNQT------------------------HAKRAYRE   73 (364)
T ss_pred             eeEEEEeecCCCeEEEEEEECCC--------CcEEEEEEeCccccCch------------------------hHHHHHHH
Confidence            89999999999999999998666        89999998864210000                        01112357


Q ss_pred             HHHHHHhhhCCCC-cccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..++.+.+.+|. ....+.       ....++||||++  |.....+ ...++...+..++.|++.+|.+|| ..||||
T Consensus        74 ~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH  149 (364)
T cd07875          74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD--ANLCQVI-QMELDHERMSYLLYQMLCGIKHLH-SAGIIH  149 (364)
T ss_pred             HHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC--CCHHHHH-HhcCCHHHHHHHHHHHHHHHHHHh-hCCeec
Confidence            7888888765532 211111       123589999995  4332222 234777888899999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.++|+|||.|...
T Consensus       150 ~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875         150 RDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             CCCCHHHEEECCCCcEEEEeCCCcccc
Confidence            99999999995 689999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.73  E-value=3e-17  Score=158.00  Aligned_cols=140  Identities=18%  Similarity=0.209  Sum_probs=97.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH-H
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR-N  119 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~-n  119 (351)
                      +.||.|+||.||+|.+..+        |+.||||+++.......                     .....  ...|.. .
T Consensus         1 ~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~---------------------~~~~~--~~~e~~~~   49 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLD--------GKCYAVKVLQKKIVLNR---------------------KEQKH--IMAERNVL   49 (325)
T ss_pred             CceeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhh---------------------hHHHH--HHHHHHHH
Confidence            4699999999999998666        99999999875321000                     00001  112222 3


Q ss_pred             HHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        120 LTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       120 L~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ++.+.+.+| .+...+. ....+|||||+. +|.....+. ...++...+..++.||+.+|.+|| ..|+|||||||.||
T Consensus        50 l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH-~~givH~Dlkp~NI  127 (325)
T cd05604          50 LKNVKHPFLVGLHYSFQTTEKLYFVLDFVN-GGELFFHLQRERSFPEPRARFYAAEIASALGYLH-SINIVYRDLKPENI  127 (325)
T ss_pred             HHhCCCCCCccEEEEEecCCEEEEEEcCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHe
Confidence            444555443 2212222 245689999996 444433333 346888889999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 ll~~~~~~kL~DfG~~~~  145 (325)
T cd05604         128 LLDSQGHVVLTDFGLCKE  145 (325)
T ss_pred             EECCCCCEEEeecCCccc
Confidence            994 68999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.73  E-value=3.3e-17  Score=157.63  Aligned_cols=141  Identities=18%  Similarity=0.165  Sum_probs=96.1

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        ++.||||+++........                      ........+...+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~----------------------~~~~~~~e~~~~l   50 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAE--------EKFYAVKVLQKKAILKKK----------------------EEKHIMSERNVLL   50 (325)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHHHhhh----------------------HHHHHHHHHHHHH
Confidence            4699999999999998666        889999998752110000                      0001111122234


Q ss_pred             HHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      ..+.+.+|. +-..+. ....++||||+. +|.....+.. ..++...+..++.||+.+|.+|| ..|+|||||||.|||
T Consensus        51 ~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~giiHrDlkp~Nil  128 (325)
T cd05602          51 KNVKHPFLVGLHFSFQTADKLYFVLDYIN-GGELFYHLQRERCFLEPRARFYAAEIASALGYLH-SLNIVYRDLKPENIL  128 (325)
T ss_pred             HhCCCCCCCceeEEEEcCCeEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHeE
Confidence            555554432 111111 244689999995 3444333332 35777888889999999999999 599999999999999


Q ss_pred             E-eCCeEEEEEcccccc
Q psy10135        198 V-HKATLFIIDVAQSVE  213 (351)
Q Consensus       198 i-~~g~l~IIDFG~Av~  213 (351)
                      + .++.++|+|||.|..
T Consensus       129 i~~~~~~kl~DfG~a~~  145 (325)
T cd05602         129 LDSQGHIVLTDFGLCKE  145 (325)
T ss_pred             ECCCCCEEEccCCCCcc
Confidence            9 468999999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.72  E-value=3.8e-17  Score=167.78  Aligned_cols=144  Identities=15%  Similarity=0.180  Sum_probs=104.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.+..+        |+.||||+++.....-.                        ......+
T Consensus        33 rY~i~~~LG~G~fG~Vy~a~~~~~--------g~~vAvK~i~~~~~~~~------------------------~~~~~~~   80 (496)
T PTZ00283         33 KYWISRVLGSGATGTVLCAKRVSD--------GEPFAVKVVDMEGMSEA------------------------DKNRAQA   80 (496)
T ss_pred             CEEEEEEEecCCCEEEEEEEEcCC--------CCEEEEEEEecccCCHH------------------------HHHHHHH
Confidence            599999999999999999998666        99999999875321100                        1112346


Q ss_pred             HHHHHHHhhhCCC-Cccccccc---------cceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL---------KSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~---------~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      |+..|..+.+.++ .+...+..         ...++||||+. .|.....+..     ..++...+..++.|++.+|.+|
T Consensus        81 Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~-~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l  159 (496)
T PTZ00283         81 EVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYAN-AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV  159 (496)
T ss_pred             HHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCC-CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            7777776654432 11111111         12469999996 4544433332     2478888899999999999999


Q ss_pred             HhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        181 YNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      | ..|||||||||.|||+. ++.++|+|||+|..
T Consensus       160 H-~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~  192 (496)
T PTZ00283        160 H-SKHMIHRDIKSANILLCSNGLVKLGDFGFSKM  192 (496)
T ss_pred             H-hCCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence            9 59999999999999995 68999999999854

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.72  E-value=3.3e-17  Score=165.58  Aligned_cols=138  Identities=15%  Similarity=0.104  Sum_probs=102.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        ++.||||.+.....                              ...+
T Consensus        67 ~y~~~~~LG~G~fg~Vy~~~~~~~--------~~~vAiK~i~~~~~------------------------------~~~~  108 (440)
T PTZ00036         67 SYKLGNIIGNGSFGVVYEAICIDT--------SEKVAIKKVLQDPQ------------------------------YKNR  108 (440)
T ss_pred             eEEEeEEEEeCCCEEEEEEEECCC--------CCEEEEEEEecCcc------------------------------hHHH
Confidence            499999999999999999998556        89999998753110                              0135


Q ss_pred             HHHHHHHhhhCCCC-cccccc-----c----cceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-----L----KSHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-----~----~~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      |+..|+.|.+.+|. ....+.     .    ...++||||++  |.....+     ....++...+..++.||+.+|.+|
T Consensus       109 Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~--~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL  186 (440)
T PTZ00036        109 ELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP--QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI  186 (440)
T ss_pred             HHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC--ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            88888888776532 211111     0    12358999996  3322222     123578888899999999999999


Q ss_pred             HhhCCccccCCCCCceEEe-C-CeEEEEEccccccC
Q psy10135        181 YNKCHLVHADLSEYNMLVH-K-ATLFIIDVAQSVEH  214 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~-~-g~l~IIDFG~Av~~  214 (351)
                      | ..|||||||||.|||++ + +.++|+|||.|...
T Consensus       187 H-~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~  221 (440)
T PTZ00036        187 H-SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL  221 (440)
T ss_pred             H-HCCEecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence            9 59999999999999996 3 46999999999643

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.72  E-value=2.6e-17  Score=154.43  Aligned_cols=142  Identities=15%  Similarity=0.071  Sum_probs=99.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+       .|..||||+++.......                        ......+|
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~vavK~~~~~~~~~~------------------------~~~~~~~e   51 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKN-------GGRFVALKRVRVQTGEEG------------------------MPLSTIRE   51 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCC-------CCeEEEEEEEecccCCCC------------------------chHHHHHH
Confidence            78899999999999999987332       168899999875321000                        00111245


Q ss_pred             HHHHHHhh---hCCCCcccccc---------ccceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMY---SEGLNVPKPIL---------LKSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL~---~~gi~vP~pi~---------~~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      ...+.+|.   +.+|  +..+.         ....++||||++  |.....+.   ...++...+..++.||+.+|.+||
T Consensus        52 ~~~l~~l~~~~hpni--v~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH  127 (290)
T cd07862          52 VAVLRHLETFEHPNV--VRLFDVCTVSRTDRETKLTLVFEHVD--QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH  127 (290)
T ss_pred             HHHHHhhcccCCCCc--ceEEEEEecccCCCCCcEEEEEccCC--CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            55666553   3332  22221         123579999995  43333332   234788889999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|++||||||.|||+. ++.++|+|||.|...
T Consensus       128 -~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862         128 -SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             -HCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence             59999999999999995 689999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.72  E-value=3.8e-17  Score=157.14  Aligned_cols=141  Identities=16%  Similarity=0.181  Sum_probs=96.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        |+.||||++.........                      ..+.....+...+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~----------------------~~~~~~~e~~~~~   50 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKAD--------GKFYAVKVLQKKAILKKK----------------------EQKHIMAERNVLL   50 (323)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHHhhhh----------------------HHHHHHHHHHHHH
Confidence            4699999999999999666        999999998753211000                      0011111122234


Q ss_pred             HHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      ..+.+.+| .+...+. ....+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.|||
T Consensus        51 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~givH~dikp~NIl  128 (323)
T cd05575          51 KNVKHPFLVGLHYSFQTADKLYFVLDYVN-GGELFFHLQRERSFPEPRARFYAAEIASALGYLH-SLNIIYRDLKPENIL  128 (323)
T ss_pred             hhCCCCCCCCeeEEEEeCCEEEEEEcCCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCCHHHeE
Confidence            55655443 2212221 244689999995 344333333 245788888899999999999999 599999999999999


Q ss_pred             E-eCCeEEEEEcccccc
Q psy10135        198 V-HKATLFIIDVAQSVE  213 (351)
Q Consensus       198 i-~~g~l~IIDFG~Av~  213 (351)
                      + .++.++|+|||.+..
T Consensus       129 l~~~~~~kl~Dfg~~~~  145 (323)
T cd05575         129 LDSQGHVVLTDFGLCKE  145 (323)
T ss_pred             ECCCCcEEEeccCCCcc
Confidence            9 468999999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.72  E-value=2.8e-17  Score=157.93  Aligned_cols=140  Identities=19%  Similarity=0.166  Sum_probs=96.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|....+        ++.||||+++........                     ....  ...|...+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~---------------------~~~~--~~~e~~~l   49 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGT--------NEFFAIKALKKDVVLEDD---------------------DVEC--TMVERRVL   49 (316)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhhh---------------------hHHH--HHHHHHHH
Confidence            3699999999999998666        889999999853211000                     0000  12233444


Q ss_pred             HHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ..+ .+.+| .+...+.. ...++||||+. +|.....+.. ..++...+..++.||+.+|.+|| ..|||||||||.||
T Consensus        50 ~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~-gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH-~~~ivH~dlkp~Ni  127 (316)
T cd05592          50 ALAWEHPFLTHLFCTFQTKEHLFFVMEYLN-GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLH-KKGIIYRDLKLDNV  127 (316)
T ss_pred             HhccCCCCccceeeEEEcCCEEEEEEcCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCEEeCCCCHHHe
Confidence            433 33332 11111111 34579999995 3444333332 45888888999999999999999 59999999999999


Q ss_pred             EE-eCCeEEEEEcccccc
Q psy10135        197 LV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li-~~g~l~IIDFG~Av~  213 (351)
                      |+ .++.++|+|||.|..
T Consensus       128 ll~~~~~~kL~Dfg~a~~  145 (316)
T cd05592         128 LLDKDGHIKIADFGMCKE  145 (316)
T ss_pred             EECCCCCEEEccCcCCeE
Confidence            99 468999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG4236|consensus

Probab=99.72  E-value=1.1e-17  Score=168.52  Aligned_cols=145  Identities=17%  Similarity=0.195  Sum_probs=110.8

Q ss_pred             eeeec--ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         36 VSEVN--GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        36 ~y~I~--~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      +|+|.  ++||+|.||.||-|.++.+        |+.||||++..-               ||-.       ...  -..
T Consensus       563 vYQif~devLGSGQFG~VYgg~hRkt--------GrdVAvKvIdKl---------------rFp~-------kqe--sql  610 (888)
T KOG4236|consen  563 VYQIFADEVLGSGQFGTVYGGKHRKT--------GRDVAVKVIDKL---------------RFPT-------KQE--SQL  610 (888)
T ss_pred             HHHhhhHhhccCCcceeeecceeccc--------Cceeeeeeeecc---------------cCCC-------chH--HHH
Confidence            35553  7899999999999999888        999999998652               2311       011  123


Q ss_pred             HHHHHHHHHhhhCCCCccccc-cc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPI-LL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi-~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ..|..+|..+++.||-+-+.. .. .+.+.|||-+  .|..+..+.   ..+|++.-.+-+..||+.+|++||. .+|||
T Consensus       611 R~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl--~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~-knIvH  687 (888)
T KOG4236|consen  611 RNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL--HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHF-KNIVH  687 (888)
T ss_pred             HHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh--cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh-cceee
Confidence            568999999999996443322 22 4567999999  565544332   2468877778899999999999996 89999


Q ss_pred             cCCCCCceEEeC----CeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVHK----ATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~~----g~l~IIDFG~Av~~~  215 (351)
                      +||||+|||+..    -+++|+|||.|+.++
T Consensus       688 CDLKPENVLLas~~~FPQvKlCDFGfARiIg  718 (888)
T KOG4236|consen  688 CDLKPENVLLASASPFPQVKLCDFGFARIIG  718 (888)
T ss_pred             ccCCchheeeccCCCCCceeeccccceeecc
Confidence            999999999953    489999999998764

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.72  E-value=5.9e-17  Score=156.49  Aligned_cols=145  Identities=17%  Similarity=0.128  Sum_probs=108.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|++|.||+|.+..+        |..+|+|+++....                         ........+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~~a~k~~~~~~~-------------------------~~~~~~~~~   52 (331)
T cd06649           6 DFERISELGAGNGGVVTKVQHKPS--------GLIMARKLIHLEIK-------------------------PAIRNQIIR   52 (331)
T ss_pred             cceEEEeecCCCCEEEEEEEECCC--------CcEEEEEEeecccC-------------------------HHHHHHHHH
Confidence            488999999999999999998666        89999999875210                         011223456


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.++.+.+|. +...+. ....++||||+. .|.....+.. ..++...+..+..|++.+|.+||+++++||||||
T Consensus        53 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlk  131 (331)
T cd06649          53 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD-GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK  131 (331)
T ss_pred             HHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCC
Confidence            88999998776532 222221 244689999995 3333333332 3477888889999999999999965679999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.+...
T Consensus       132 p~Nil~~~~~~~kl~Dfg~~~~~  154 (331)
T cd06649         132 PSNILVNSRGEIKLCDFGVSGQL  154 (331)
T ss_pred             hhhEEEcCCCcEEEccCcccccc
Confidence            9999995 689999999998644

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.72  E-value=3.1e-17  Score=154.28  Aligned_cols=139  Identities=20%  Similarity=0.189  Sum_probs=100.0

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||.|+||.||+|.+..+        |+.||||++........  .                    . ......|..+|.+
T Consensus         1 lg~G~~g~Vy~~~~~~~--------~~~~avK~~~~~~~~~~--~--------------------~-~~~~~~E~~il~~   49 (280)
T cd05608           1 LGKGGFGEVSACQMRAT--------GKLYACKKLNKKRLKKR--K--------------------G-YEGAMVEKRILAK   49 (280)
T ss_pred             CCCCCceeEEEEEEccC--------CcEEEEEeeeHHHHhhh--H--------------------H-HHHHHHHHHHHHh
Confidence            79999999999998666        89999999864211100  0                    0 0112468888999


Q ss_pred             hhhCCCC-ccccccc-cceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        123 MYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       123 L~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      +++.++. ....+.. ...+|||||+. .|.....+     ....++...+..++.||+.+|.+|| .+|++||||||.|
T Consensus        50 l~~~~i~~~~~~~~~~~~~~lv~e~~~-~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~N  127 (280)
T cd05608          50 VHSRFIVSLAYAFQTKTDLCLVMTIMN-GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH-QRRIIYRDLKPEN  127 (280)
T ss_pred             CCCCcEeeeeEEEcCCCeEEEEEeCCC-CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHH
Confidence            8766532 2112222 34679999995 34332222     1235788888999999999999999 5999999999999


Q ss_pred             eEEe-CCeEEEEEccccccC
Q psy10135        196 MLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||++ ++.++|+|||.|...
T Consensus       128 ili~~~~~~~l~dfg~~~~~  147 (280)
T cd05608         128 VLLDNDGNVRISDLGLAVEL  147 (280)
T ss_pred             EEECCCCCEEEeeCccceec
Confidence            9995 588999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.72  E-value=3e-17  Score=158.57  Aligned_cols=140  Identities=18%  Similarity=0.214  Sum_probs=100.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        ++.||||+++.....  . .                  .  .......|...+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~--------~~~~aiK~i~~~~~~--~-~------------------~--~~~~~~~e~~il   49 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKT--------RRIYAMKVIKKELVN--D-D------------------E--DIDWVQTEKHVF   49 (329)
T ss_pred             CeEeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhh--h-h------------------h--HHHHHHHHHHHH
Confidence            4689999999999998666        899999999753110  0 0                  0  011224567777


Q ss_pred             HHhh-hCCC-Cccccccc-cceEEEEcccCccccccccc-ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKL-KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L-~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .++. +.+| .+...+.. ...+|||||+. +|.....+ +...++...+..++.||+.+|.+|| .+|+|||||||.||
T Consensus        50 ~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Ni  127 (329)
T cd05588          50 ETASNHPFLVGLHSCFQTESRLFFVIEFVS-GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLH-ERGIIYRDLKLDNV  127 (329)
T ss_pred             HhccCCCCCCceEEEEEcCCEEEEEEeCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHe
Confidence            7773 3332 22222222 44589999995 34333333 2346888899999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 li~~~~~~kL~Dfg~~~~  145 (329)
T cd05588         128 LLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             EECCCCCEEECcCccccc
Confidence            995 68899999998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.72  E-value=2.3e-17  Score=159.40  Aligned_cols=144  Identities=19%  Similarity=0.180  Sum_probs=102.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|....+        ++.||||++........                      .. ......|
T Consensus         3 y~~~~~lG~G~fg~V~~~~~~~~--------~~~~aiK~~~~~~~~~~----------------------~~-~~~~~~e   51 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVKLKNA--------DKVFAMKILNKWEMLKR----------------------AE-TACFREE   51 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCC--------CCEEEEEEEeHHHHHHh----------------------hH-HHHHHHH
Confidence            78899999999999999998666        88999999864110000                      00 1112346


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.+..+. +...+. ....+|||||+. +|.....+..  ..++...++.++.||+.+|.+|| ..|+||||||
T Consensus        52 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~-~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH-~~~iiHrDlk  129 (332)
T cd05623          52 RDVLVNGDNQWITTLHYAFQDENNLYLVMDYYV-GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH-QLHYVHRDIK  129 (332)
T ss_pred             HHHHhhCCCCCEeeEEEEEecCCEEEEEEeccC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCC
Confidence            6666666554321 111111 134589999995 4544444443  35788888899999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.|..
T Consensus       130 p~Nili~~~~~~kL~DfG~a~~  151 (332)
T cd05623         130 PDNILMDMNGHIRLADFGSCLK  151 (332)
T ss_pred             HHHEEECCCCCEEEeecchhee
Confidence            9999995 68999999998854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.72  E-value=4.6e-17  Score=156.04  Aligned_cols=143  Identities=17%  Similarity=0.212  Sum_probs=102.8

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||++.....     ...|+.||||+++........                        ......|+..|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~-----~~~~~~~aiK~~~~~~~~~~~------------------------~~~~~~E~~~l   52 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITG-----PDAGQLYAMKVLKKATLKVRD------------------------RVRTKMERDIL   52 (318)
T ss_pred             ceeeeCCCEEEEEEEEecc-----CCCCCEEEEEEEEHHHhhhhh------------------------HHHHHHHHHHH
Confidence            5799999999999876210     012889999999753211100                        11235688889


Q ss_pred             HHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      .+|.+.+|. +...+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+||+||||||.|||
T Consensus        53 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil  130 (318)
T cd05582          53 AEVNHPFIVKLHYAFQTEGKLYLILDFLR-GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH-SLGIIYRDLKPENIL  130 (318)
T ss_pred             HhCCCCCcccEEEEEEcCCEEEEEEcCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHeE
Confidence            998776542 2122212 34579999996 454444443 345888899999999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEccccccC
Q psy10135        198 VH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~~  214 (351)
                      +. ++.++|+|||.+...
T Consensus       131 ~~~~~~~kL~Dfg~~~~~  148 (318)
T cd05582         131 LDEEGHIKLTDFGLSKES  148 (318)
T ss_pred             ECCCCcEEEeeccCCccc
Confidence            95 689999999998654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.72  E-value=3.6e-17  Score=158.22  Aligned_cols=140  Identities=16%  Similarity=0.176  Sum_probs=100.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        ++.||||+++......                     .  ....+...|...+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~---------------------~--~~~~~~~~E~~~l   49 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKT--------ERIYAMKVVKKELVND---------------------D--EDIDWVQTEKHVF   49 (329)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEhhHhcc---------------------h--hHHHHHHHHHHHH
Confidence            4699999999999998666        8999999998632100                     0  0112334566666


Q ss_pred             HHh-hhCCC-Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .++ .+.+| .+...+. ....+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+|+|||||||.||
T Consensus        50 ~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~-~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dikp~Ni  127 (329)
T cd05618          50 EQASNHPFLVGLHSCFQTESRLFFVIEYVN-GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH-ERGIIYRDLKLDNV  127 (329)
T ss_pred             HhcCCCCcCCceeeEEEeCCEEEEEEeCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHHHE
Confidence            665 33332 2212221 245689999995 444333332 346888889999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 li~~~~~~kL~DfG~~~~  145 (329)
T cd05618         128 LLDSEGHIKLTDYGMCKE  145 (329)
T ss_pred             EECCCCCEEEeeCCcccc
Confidence            994 68999999998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.72  E-value=5.4e-17  Score=153.96  Aligned_cols=150  Identities=18%  Similarity=0.122  Sum_probs=102.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCccc--------ccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKI--------ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRK  107 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~--------~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~  107 (351)
                      -|.+.+.||+|+||.||+|........        ...+.+..||||+++....  .                       
T Consensus         6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~-----------------------   60 (304)
T cd05096           6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--K-----------------------   60 (304)
T ss_pred             hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--H-----------------------
Confidence            378899999999999999975211000        0011245799999876321  0                       


Q ss_pred             HHHHHHHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--------------------CCCCH
Q psy10135        108 MVRTWAEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--------------------TPLTE  163 (351)
Q Consensus       108 ~vk~~aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--------------------~~l~~  163 (351)
                      ..+....+|+..|.+|.+.+|  .+.+.    ....+|||||+. .|.....+..                    ..++.
T Consensus        61 ~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (304)
T cd05096          61 NARNDFLKEVKILSRLKDPNI--IRLLGVCVDEDPLCMITEYME-NGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISY  137 (304)
T ss_pred             HHHHHHHHHHHHHhhcCCCCe--eEEEEEEecCCceEEEEecCC-CCcHHHHHHhccccccccccccccccccccccccH
Confidence            011123468888988876553  22222    245689999995 3332222211                    12455


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        164 SGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       164 ~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..+..++.||+.+|.+|| .+|+|||||||.|||+. ++.++|+|||.|...
T Consensus       138 ~~~~~i~~~i~~al~~lH-~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~  188 (304)
T cd05096         138 SSLLHVALQIASGMKYLS-SLNFVHRDLATRNCLVGENLTIKIADFGMSRNL  188 (304)
T ss_pred             HHHHHHHHHHHHHHHHHH-HCCccccCcchhheEEcCCccEEECCCccceec
Confidence            677889999999999999 59999999999999995 578999999998654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.72  E-value=2.6e-17  Score=158.45  Aligned_cols=140  Identities=18%  Similarity=0.173  Sum_probs=98.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        ++.||||+++..... .. .                     .......|...+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~-~~-~---------------------~~~~~~~e~~~l   49 (320)
T cd05590           1 RVLGKGSFGKVMLARLKES--------GRLYAVKVLKKDVIL-QD-D---------------------DVECTMTEKRIL   49 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCC--------CCEEEEEEEEHHHHh-hc-c---------------------HHHHHHHHHHHH
Confidence            3699999999999998666        899999998753110 00 0                     001123455666


Q ss_pred             HHhh-hCCC-Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMY-SEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~-~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ..+. +.+| .+...+. ....+|||||+. .|.....+. ...++...+..++.|++.+|.+|| ..|+|||||||.||
T Consensus        50 ~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~-~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH-~~~ivH~dlkp~NI  127 (320)
T cd05590          50 SLARNHPFLTQLYCCFQTPDRLFFVMEFVN-GGDLMFHIQKSRRFDEARARFYAAEITSALMFLH-DKGIIYRDLKLDNV  127 (320)
T ss_pred             HhccCCCchhceeeEEEcCCEEEEEEcCCC-CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCCHHHe
Confidence            6553 3332 2222222 244689999995 344433333 346888889999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.+..
T Consensus       128 li~~~~~~kL~DfG~~~~  145 (320)
T cd05590         128 LLDHEGHCKLADFGMCKE  145 (320)
T ss_pred             EECCCCcEEEeeCCCCee
Confidence            994 68999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.72  E-value=2.5e-17  Score=158.23  Aligned_cols=140  Identities=19%  Similarity=0.166  Sum_probs=98.1

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        |..||||+++........                     .  ......|.+.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~~---------------------~--~~~~~~e~~~l   49 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGK--------GEYFAVKALKKDVVLIDD---------------------D--VECTMVEKRVL   49 (316)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhhhcc---------------------h--HHHHHHHHHHH
Confidence            4699999999999998666        899999999863211000                     0  01123456666


Q ss_pred             HHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ..+ .+..+ .+...+.. ...+|||||+. .|.....+.. ..++..++..++.||+.+|.+|| ..|||||||||.||
T Consensus        50 ~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~-~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivHrDlkp~Ni  127 (316)
T cd05620          50 ALAWENPFLTHLYCTFQTKEHLFFVMEFLN-GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLH-SKGIIYRDLKLDNV  127 (316)
T ss_pred             HhccCCCCccCeeEEEEeCCEEEEEECCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCHHHe
Confidence            654 33322 11111222 34579999995 3444333333 45788888999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 l~~~~~~~kl~Dfg~~~~  145 (316)
T cd05620         128 MLDRDGHIKIADFGMCKE  145 (316)
T ss_pred             EECCCCCEEeCccCCCee
Confidence            995 68999999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.72  E-value=4.1e-17  Score=152.72  Aligned_cols=142  Identities=18%  Similarity=0.124  Sum_probs=101.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |+.||||+++......        +           .     .....+|
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~--------~~~~aiK~~~~~~~~~--------~-----------~-----~~~~~~e   49 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHS--------GHFVALKSVRVQTNED--------G-----------L-----PLSTVRE   49 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCC--------CcEEEEEEeccCcCCC--------C-----------C-----chHHHHH
Confidence            78899999999999999998666        8999999987531100        0           0     0112346


Q ss_pred             HHHHHHhh---hCCCCccccccc---------cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMY---SEGLNVPKPILL---------KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL~---~~gi~vP~pi~~---------~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      ...+++|.   +.+|  ...+..         ...++||||++  |.....+..   ..++...+..++.|++.+|.+||
T Consensus        50 ~~~l~~l~~~~h~ni--~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  125 (288)
T cd07863          50 VALLKRLEAFDHPNI--VRLMDVCATSRTDRETKVTLVFEHVD--QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH  125 (288)
T ss_pred             HHHHHHhhhcCCCCe--eeeeeeeccccCCCCceEEEEEcccc--cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            66666664   3332  122211         22479999995  433222322   34788899999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                       ..|+||+||||.|||+. ++.++|+|||.+....
T Consensus       126 -~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863         126 -ANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             -hCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence             59999999999999995 6889999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.71  E-value=6.1e-17  Score=155.90  Aligned_cols=144  Identities=17%  Similarity=0.221  Sum_probs=101.7

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.....     ...|+.||||+++..... ..                   .  ........|+.+|
T Consensus         2 ~~lg~G~~g~V~~~~~~~~-----~~~~~~~avK~~~~~~~~-~~-------------------~--~~~~~~~~E~~il   54 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTG-----ADTGKIFAMKVLKKATIV-RN-------------------Q--KDTAHTKAERNIL   54 (323)
T ss_pred             ceeeecCCeEEEEEEEccc-----CCCCCEEEEEEEEHHHHH-hh-------------------h--hhHHHHHHHHHHH
Confidence            6799999999999986211     112889999998753110 00                   0  0012235688899


Q ss_pred             HHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      .++.+.+|. +...+.. ...++||||+. .|.....+.. ..++...+..++.||+.+|.+|| ..|||||||||.|||
T Consensus        55 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nil  132 (323)
T cd05584          55 EAVKHPFIVDLIYAFQTGGKLYLILEYLS-GGELFMHLEREGIFMEDTACFYLSEISLALEHLH-QQGIIYRDLKPENIL  132 (323)
T ss_pred             HhCCCCchhceeeEEecCCeEEEEEeCCC-CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeE
Confidence            998776642 2222222 34589999995 4444444433 34677788889999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEcccccc
Q psy10135        198 VH-KATLFIIDVAQSVE  213 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~  213 (351)
                      +. ++.++|+|||.+..
T Consensus       133 ~~~~~~~kl~Dfg~~~~  149 (323)
T cd05584         133 LDAQGHVKLTDFGLCKE  149 (323)
T ss_pred             ECCCCCEEEeeCcCCee
Confidence            94 68999999998864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0198|consensus

Probab=99.71  E-value=5.1e-17  Score=157.74  Aligned_cols=144  Identities=17%  Similarity=0.180  Sum_probs=108.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -+..+++||.|+||.||++....+        |..+|||.......                       +.   ....++
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~--------g~~~AvK~v~~~~~-----------------------~~---~~~l~~   63 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKT--------GELMAVKSVELEDS-----------------------PT---SESLER   63 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCC--------Ccceeeeeeecccc-----------------------hh---HHHHHH
Confidence            367789999999999999999666        89999998754210                       00   112468


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-c--ceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-K--SHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~--~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+++|.+|.+..| ++--.... .  ...|.|||+. .|.....++..  .|++..++.+..|++.+|.+|| .+|+|||
T Consensus        64 Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~-~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH-s~g~vH~  141 (313)
T KOG0198|consen   64 EIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAP-GGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH-SKGIVHC  141 (313)
T ss_pred             HHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccC-CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCEecc
Confidence            9999999984432 21111111 1  3679999996 55554444443  5899999999999999999999 6999999


Q ss_pred             CCCCCceEEeC--CeEEEEEccccccCC
Q psy10135        190 DLSEYNMLVHK--ATLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~~--g~l~IIDFG~Av~~~  215 (351)
                      ||||.|||+..  +.++|.|||.|....
T Consensus       142 DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen  142 DIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             CcccceEEEeCCCCeEEeccCccccccc
Confidence            99999999965  799999999887544

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.71  E-value=4.8e-17  Score=157.03  Aligned_cols=140  Identities=19%  Similarity=0.224  Sum_probs=99.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|....+        ++.||||+++.....  . .                    ....+...|...+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~--~-~--------------------~~~~~~~~e~~~~   49 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKN--------DQIYAMKVVKKELVH--D-D--------------------EDIDWVQTEKHVF   49 (327)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHhh--h-h--------------------hHHHHHHHHHHHH
Confidence            4799999999999998666        899999999763210  0 0                    0111234577777


Q ss_pred             HHhh-hCCC-Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMY-SEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~-~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .++. +..| .+...+. ....+|||||+. +|.....+. ...++...+..++.||+.+|.+|| ..|||||||||.||
T Consensus        50 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH-~~~ivHrDlkp~Ni  127 (327)
T cd05617          50 EQASSNPFLVGLHSCFQTTSRLFLVIEYVN-GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLH-ERGIIYRDLKLDNV  127 (327)
T ss_pred             HhhcCCCCEeeEEEEEEeCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHE
Confidence            7764 3322 1111121 244579999995 343333332 346888899999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 li~~~~~~kl~Dfg~~~~  145 (327)
T cd05617         128 LLDADGHIKLTDYGMCKE  145 (327)
T ss_pred             EEeCCCCEEEecccccee
Confidence            994 68999999998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG1989|consensus

Probab=99.71  E-value=4.3e-17  Score=171.69  Aligned_cols=158  Identities=18%  Similarity=0.227  Sum_probs=113.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      ++|.+.|.+||||.||.|.+...        |..||+|.+-..                          -+..-..+.+|
T Consensus        39 v~V~~vLAEGGFa~VYla~~~~~--------~~~~AlKrm~~~--------------------------de~~L~~v~~E   84 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDVKG--------GKKYALKRMYVN--------------------------DEEALNAVKRE   84 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEecCC--------CceeeeeeeecC--------------------------CHHHHHHHHHH
Confidence            67889999999999999998543        599999975431                          01222235689


Q ss_pred             HHHHHHhhhCCCCccccccc-----------cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        117 MRNLTRMYSEGLNVPKPILL-----------KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~-----------~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      +..|+.|..+- .+...|+.           ....|+||||. +|..+..+.   +.+|++.++.+|+.++++|+.+|| 
T Consensus        85 I~~MK~L~gh~-nIV~yidss~~~~~~~~~~~EvllLmEyC~-gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH-  161 (738)
T KOG1989|consen   85 IDIMKLLSGHK-NIVSYIDSSAINRSSNNGVWEVLLLMEYCK-GGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH-  161 (738)
T ss_pred             HHHHHHhcCCC-ceeeEeccccccccCCCceeEEEeehhhcc-CCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh-
Confidence            99999997321 12222220           12358999996 344444332   346999999999999999999999 


Q ss_pred             hCC--ccccCCCCCceEE-eCCeEEEEEccccccCCCCC----hHHHHHhhhhhhh
Q psy10135        183 KCH--LVHADLSEYNMLV-HKATLFIIDVAQSVEHDHPH----ALQFLRKDCDNVT  231 (351)
Q Consensus       183 ~~g--lVH~DLkp~NILi-~~g~l~IIDFG~Av~~~~p~----a~~fl~~D~~~v~  231 (351)
                      .+.  |||||||-+|||+ .+|+.+|||||.|...-++-    ...++..+|..-+
T Consensus       162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~T  217 (738)
T KOG1989|consen  162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYT  217 (738)
T ss_pred             cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhC
Confidence            488  9999999999999 46889999999997654332    3455666665433

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.71  E-value=1.2e-16  Score=155.34  Aligned_cols=145  Identities=20%  Similarity=0.201  Sum_probs=108.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |..||||+++.....                        .........
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~------------------------~~~~~~~~~   63 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDRRT--------GAKVAIKKLYRPFQS------------------------ELFAKRAYR   63 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEECCC--------CcEEEEEEecccccc------------------------hHHHHHHHH
Confidence            489999999999999999998666        999999987542100                        011223456


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|+++.+.+| .+...+..       ...++||+|+|  +.....+....++...+..++.||+.+|.+|| +.|++
T Consensus        64 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH-~~gi~  140 (343)
T cd07880          64 ELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMG--TDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIH-AAGII  140 (343)
T ss_pred             HHHHHHhcCCCCccceeeeecCCccccccceEEEEEecCC--CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCee
Confidence            8888998877663 22222211       23589999995  33333334456888889999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+||||.|||+. ++.++|+|||.|....
T Consensus       141 H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880         141 HRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             cCCCCHHHEEEcCCCCEEEeecccccccc
Confidence            999999999995 6889999999997543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=4.9e-17  Score=159.16  Aligned_cols=135  Identities=14%  Similarity=0.141  Sum_probs=103.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|....+        +..||+|+.....                                ...
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~valK~~~~~~--------------------------------~~~  106 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKPGQ--------PDPVVLKIGQKGT--------------------------------TLI  106 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEECCC--------CceEEEEeCCccc--------------------------------cHH
Confidence            499999999999999999998555        8899999743310                                023


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |...|.++.+.+|. +...+. ....++|||++.  |.....+.  ...++...+..++.||+.+|.+|| .+|||||||
T Consensus       107 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDl  183 (357)
T PHA03209        107 EAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS--SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH-AQRIIHRDV  183 (357)
T ss_pred             HHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC--CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCC
Confidence            67788888766532 222221 234689999994  54444443  235788889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||.|||+. ++.++|+|||.|..
T Consensus       184 kp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        184 KTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             CHHHEEECCCCCEEEecCccccc
Confidence            99999995 58899999999863

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.71  E-value=8.8e-17  Score=155.74  Aligned_cols=145  Identities=18%  Similarity=0.144  Sum_probs=107.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|.+..+        |..+|+|+++....                         ........+
T Consensus         6 ~y~~~~~lg~g~~g~V~~~~~~~~--------~~~~a~k~~~~~~~-------------------------~~~~~~~~~   52 (333)
T cd06650           6 DFEKISELGAGNGGVVFKVSHKPS--------GLIMARKLIHLEIK-------------------------PAIRNQIIR   52 (333)
T ss_pred             hhheeccccCCCCEEEEEEEECCC--------CcEEEEEEeecccC-------------------------HHHHHHHHH
Confidence            488999999999999999998666        88999998875210                         011223457


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |++.|.++.+.+|. +...+. ....+|||||+. .|.....+.. ..++...+..++.+++.+|.+||+.+++||+|||
T Consensus        53 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlk  131 (333)
T cd06650          53 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD-GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK  131 (333)
T ss_pred             HHHHHHHCCCCcccceeEEEEECCEEEEEEecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence            89999999776632 222222 245689999995 3333333332 3477778889999999999999965689999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       132 p~Nili~~~~~~kL~Dfg~~~~~  154 (333)
T cd06650         132 PSNILVNSRGEIKLCDFGVSGQL  154 (333)
T ss_pred             hhhEEEcCCCCEEEeeCCcchhh
Confidence            9999995 588999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.71  E-value=4.5e-17  Score=172.98  Aligned_cols=146  Identities=21%  Similarity=0.181  Sum_probs=105.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.+..+        ++.||||+++.......                       ........
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~~~--------~~~vAiKvi~~~~~~~~-----------------------~~~~~~~~   53 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKKNN--------SKLYAVKVVKKADMINK-----------------------NMVHQVQA   53 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCC--------CcEEEEEEEehhhccCH-----------------------HHHHHHHH
Confidence            388999999999999999999656        89999999875321000                       01122356


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |...+..+.+.+|. +...+. ....+|||||+. +|.....+.. ..++...++.++.||+.+|.+|| .+||||||||
T Consensus        54 E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~-g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH-~~gIiHrDLK  131 (669)
T cd05610          54 ERDALALSKSPFIVHLYYSLQSANNVYLVMEYLI-GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLH-RHGIIHRDLK  131 (669)
T ss_pred             HHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCcc
Confidence            77778777665532 111111 144689999994 2333222322 34677888999999999999999 5899999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||+|...
T Consensus       132 P~NILl~~~g~vkL~DFGls~~~  154 (669)
T cd05610         132 PDNMLISNEGHIKLTDFGLSKVT  154 (669)
T ss_pred             HHHEEEcCCCCEEEEeCCCCccc
Confidence            9999995 689999999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.71  E-value=8.1e-17  Score=152.55  Aligned_cols=144  Identities=15%  Similarity=0.144  Sum_probs=106.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|++|.||+|.+..+        +..||||.++.....            .             .......
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~--------~~~vaiK~~~~~~~~------------~-------------~~~~~~~   53 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLT--------DNLVALKEIRLEHEE------------G-------------APCTAIR   53 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCC--------CcEEEEEEEeccccc------------C-------------chhHHHH
Confidence            389999999999999999998666        899999998742100            0             0011235


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.+|.+.+| ++...+.. ...++||||++  |.....+..  ..++...+..++.||+.+|.+|| ..|++|+||
T Consensus        54 E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH-~~~i~H~dl  130 (301)
T cd07873          54 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD--KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH-RRKVLHRDL  130 (301)
T ss_pred             HHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc--cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCC
Confidence            8888999977663 22222221 34579999995  444333332  34777888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||++ ++.++|+|||.+....
T Consensus       131 kp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873         131 KPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             CHHHEEECCCCcEEECcCcchhccC
Confidence            99999995 5789999999986543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0588|consensus

Probab=99.70  E-value=1.6e-17  Score=170.90  Aligned_cols=143  Identities=17%  Similarity=0.186  Sum_probs=111.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++++.||.|+.|.|-+|.+..+        |+.+||||+.... ...+                 .     ...-.++|
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~T--------GqlaaiKii~k~~-~~s~-----------------s-----~~~~IerE   62 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAET--------GQLAAIKIIPKRS-ELSS-----------------S-----QPAGIERE   62 (786)
T ss_pred             eeccccccCCCCceehhhhcccc--------cceeEEEeecccc-cccc-----------------c-----cccchhhh
Confidence            89999999999999999999888        9999999987531 0000                 1     11224778


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccc-cccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAK-LKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~-L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +-+|+-|.+.+| ..-.++.. ...|||.||+. +|.++.. ++.+++++.+++.+|+||+.++.+|| ..+|+||||||
T Consensus        63 IviMkLi~HpnVl~LydVwe~~~~lylvlEyv~-gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH-~~~icHRDLKp  140 (786)
T KOG0588|consen   63 IVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVP-GGELFDYLVRKGPLPEREAAHFFRQILDGVSYCH-AFNICHRDLKP  140 (786)
T ss_pred             hHHHHHhcCCCeeeeeeeeccCceEEEEEEecC-CchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh-hhcceeccCCc
Confidence            888888877653 33333333 34589999997 5555444 45678999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av  212 (351)
                      +|+|++ .+.++|.|||+|.
T Consensus       141 ENlLLd~~~nIKIADFGMAs  160 (786)
T KOG0588|consen  141 ENLLLDVKNNIKIADFGMAS  160 (786)
T ss_pred             hhhhhhcccCEeeeccceee
Confidence            999994 5679999999995

>KOG0591|consensus

Probab=99.70  E-value=3.1e-18  Score=161.78  Aligned_cols=141  Identities=14%  Similarity=0.152  Sum_probs=106.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|.++||.|+||.||++.+..+        |..+|.|-+.-....                        .-.+-..-+|
T Consensus        21 y~Il~~IG~GsFg~vykv~~~~~--------g~l~a~K~i~f~~md------------------------~k~rq~~v~E   68 (375)
T KOG0591|consen   21 YQILKKIGRGSFGEVYKVQCLLD--------GKLVALKKIQFGMMD------------------------AKARQDCVKE   68 (375)
T ss_pred             HHHHHHHcCCcchheEEeeeccC--------cchhhhhhcchhhcc------------------------HHHHHHHHHH
Confidence            88999999999999999999777        999999976532111                        1223345679


Q ss_pred             HHHHHHhhhCCCCcccccc-----ccc-eEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHh--h
Q psy10135        117 MRNLTRMYSEGLNVPKPIL-----LKS-HVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYN--K  183 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~-----~~~-~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~--~  183 (351)
                      +..|+.|.+.+|  .+.+.     .+. ..||||+++ .|..+..++.     ..+++..+..++.|++.||.+||.  .
T Consensus        69 i~lLkQL~HpNI--VqYy~~~f~~~~evlnivmE~c~-~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~  145 (375)
T KOG0591|consen   69 ISLLKQLNHPNI--VQYYAHSFIEDNEVLNIVMELCD-AGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP  145 (375)
T ss_pred             HHHHHhcCCchH--HHHHHHhhhccchhhHHHHHhhc-ccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc
Confidence            999999987653  12221     112 458999997 5655443332     237888899999999999999995  2


Q ss_pred             CC-ccccCCCCCceEEe-CCeEEEEEccccc
Q psy10135        184 CH-LVHADLSEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       184 ~g-lVH~DLkp~NILi~-~g~l~IIDFG~Av  212 (351)
                      .| ++||||||.||.++ +|.++|-|||+++
T Consensus       146 r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r  176 (375)
T KOG0591|consen  146 RGTVMHRDIKPANIFLTANGVVKLGDFGLGR  176 (375)
T ss_pred             ccceeeccCcchheEEcCCCceeeccchhHh
Confidence            22 88999999999995 6899999999985

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.70  E-value=1.1e-16  Score=148.77  Aligned_cols=141  Identities=16%  Similarity=0.131  Sum_probs=104.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||.|++|.||+|.+ .+        ...||||+++.....                           ......|
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~-~~--------~~~valK~~~~~~~~---------------------------~~~~~~E   51 (262)
T cd05071           8 LRLEVKLGQGCFGEVWMGTW-NG--------TTRVAIKTLKPGTMS---------------------------PEAFLQE   51 (262)
T ss_pred             eeEeeecCCCCCCcEEEEEe-cC--------CceEEEEecccCccC---------------------------HHHHHHH
Confidence            89999999999999999987 44        457999998752110                           0012458


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.++ .+...+.....++||||++ .|.....+..   ..++...+..++.+++.+|.++| ..|++|+|||
T Consensus        52 ~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH-~~~i~H~dl~  129 (262)
T cd05071          52 AQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS-KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLR  129 (262)
T ss_pred             HHHHHhCCCCCcceEEEEECCCCcEEEEEcCC-CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH-HCCccccccC
Confidence            888888876553 2222222345689999996 4443333332   23677788999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+. ++.++|+|||.|....
T Consensus       130 p~Nill~~~~~~~L~dfg~~~~~~  153 (262)
T cd05071         130 AANILVGENLVCKVADFGLARLIE  153 (262)
T ss_pred             cccEEEcCCCcEEeccCCceeecc
Confidence            9999995 5789999999987543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.70  E-value=1.6e-16  Score=149.56  Aligned_cols=147  Identities=18%  Similarity=0.148  Sum_probs=108.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.+..+        |+.||||.++...... .                    +.........|
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~--------~~~v~iK~~~~~~~~~-~--------------------~~~~~~~~~~e   52 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKET--------GRIVAIKKIKLGERKE-A--------------------KDGINFTALRE   52 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCC--------CcEEEEEEEecccccc-c--------------------cchhhHHHHHH
Confidence            67888999999999999998566        8999999997632110 0                    00112233468


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.++ ++...+.. ...++||||+  .|.....+...  .++...+..++.||+.+|.+|| .+|++|+||+
T Consensus        53 ~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~--~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dl~  129 (298)
T cd07841          53 IKLLQELKHPNIIGLLDVFGHKSNINLVFEFM--ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH-SNWILHRDLK  129 (298)
T ss_pred             HHHHhhcCCCCChhhhheeecCCEEEEEEccc--CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecCCC
Confidence            888888876653 22222222 3457999999  45444444433  4788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+. ++.++|+|||.+....
T Consensus       130 p~nill~~~~~~~l~dfg~~~~~~  153 (298)
T cd07841         130 PNNLLIASDGVLKLADFGLARSFG  153 (298)
T ss_pred             hhhEEEcCCCCEEEccceeeeecc
Confidence            9999995 6889999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.70  E-value=1.1e-16  Score=148.06  Aligned_cols=140  Identities=16%  Similarity=0.155  Sum_probs=104.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.. ..        +..+|||+++.....                           .....+|
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~-~~--------~~~~~lK~~~~~~~~---------------------------~~~~~~E   51 (260)
T cd05069           8 LRLDVKLGQGCFGEVWMGTW-NG--------TTKVAIKTLKPGTMM---------------------------PEAFLQE   51 (260)
T ss_pred             eeeeeeecCcCCCeEEEEEE-cC--------CceEEEEEcccCCcc---------------------------HHHHHHH
Confidence            78899999999999999987 44        567999987652110                           0112458


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..++++.+.++ +....+.....++||||++ .|.....+..   ..++...+..++.+++.+|.+|| ..|++|+|||
T Consensus        52 ~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~dl~  129 (260)
T cd05069          52 AQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMG-KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE-RMNYIHRDLR  129 (260)
T ss_pred             HHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCC-CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeecccC
Confidence            888998876653 3333333345689999995 3444333332   23677778899999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.+...
T Consensus       130 ~~Nill~~~~~~~l~dfg~~~~~  152 (260)
T cd05069         130 AANILVGDNLVCKIADFGLARLI  152 (260)
T ss_pred             cceEEEcCCCeEEECCCccceEc
Confidence            9999995 578999999998654

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.70  E-value=7.9e-17  Score=151.90  Aligned_cols=145  Identities=17%  Similarity=0.119  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||.|.+..+        |+.||+|++........                       ........|
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~E   50 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRAT--------GKMYACKRLEKKRIKKR-----------------------KGESMALNE   50 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCC--------CcEEEEEEeehhhhhhh-----------------------hHHHHHHHH
Confidence            56778999999999999998666        89999999875321100                       011223468


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +.+|.+|.+..+. ....+.. ...++||||+. .|.....+.   ...++...+..++.|++.+|.+|| ..||||+||
T Consensus        51 ~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~iiH~di  128 (285)
T cd05632          51 KQILEKVNSQFVVNLAYAYETKDALCLVLTIMN-GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH-RENTVYRDL  128 (285)
T ss_pred             HHHHHHcCCcCceeEEEEEecCCEEEEEEEecc-CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecCC
Confidence            8999999766532 2222222 34679999995 333322222   235888889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       129 kp~Nili~~~~~~kl~Dfg~~~~~  152 (285)
T cd05632         129 KPENILLDDYGHIRISDLGLAVKI  152 (285)
T ss_pred             CHHHEEECCCCCEEEecCCcceec
Confidence            99999995 578999999988543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.70  E-value=9.8e-17  Score=152.85  Aligned_cols=139  Identities=18%  Similarity=0.194  Sum_probs=99.1

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      +..||.|+||.||+|.....      ..++.||||+++....                            .....+|+..
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~------~~~~~~aiK~~~~~~~----------------------------~~~~~~E~~~   51 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDG------KDDRDYALKQIEGTGI----------------------------SMSACREIAL   51 (317)
T ss_pred             ccccccCCCeEEEEEEEccC------CCCceEEEEEECCCCC----------------------------cHHHHHHHHH
Confidence            46899999999999986321      0168899998864210                            0113468899


Q ss_pred             HHHhhhCCC-Cccccccc---cceEEEEcccCccccccccc----------ccCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        120 LTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKL----------KDTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       120 L~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L----------~~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |.++.+.+| .....+..   ...++||||++  +.....+          ....++...++.++.||+.+|.+|| ..|
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH-~~~  128 (317)
T cd07868          52 LRELKHPNVISLQKVFLSHADRKVWLLFDYAE--HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH-ANW  128 (317)
T ss_pred             HHhcCCCCCcceeeeEecCCCcEEEEEEeccC--CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence            999977664 23222211   23479999995  3221111          1124778889999999999999999 599


Q ss_pred             ccccCCCCCceEEe-----CCeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLVH-----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi~-----~g~l~IIDFG~Av~~~  215 (351)
                      ||||||||.|||+.     .+.++|+|||.|....
T Consensus       129 ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868         129 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence            99999999999993     3689999999997543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.70  E-value=1.2e-16  Score=150.31  Aligned_cols=143  Identities=15%  Similarity=0.116  Sum_probs=105.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |..||||+++....  ..                       ......+
T Consensus         6 ~y~~~~~ig~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~--~~-----------------------~~~~~~~   52 (291)
T cd07870           6 SYLNLEKLGEGSYATVYKGISRIN--------GQLVALKVISMKTE--EG-----------------------VPFTAIR   52 (291)
T ss_pred             eeEEEEEEEecCCEEEEEEEEcCC--------CcEEEEEEecccCc--CC-----------------------CcHHHHH
Confidence            588999999999999999998666        88999999865210  00                       0011235


Q ss_pred             HHHHHHHhhhCCCCc-ccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLNV-PKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~v-P~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.++.+.++.. ...+. ....++||||++  +..+..+..  ..++...+..++.|++.+|.+|| .+|++|+||
T Consensus        53 e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dl  129 (291)
T cd07870          53 EASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH--TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH-GQHILHRDL  129 (291)
T ss_pred             HHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc--CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCC
Confidence            788888887665321 11111 134689999994  444333322  34677788889999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       130 kp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870         130 KPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             ChHHEEEcCCCcEEEecccccccc
Confidence            99999994 689999999988654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.70  E-value=6.2e-17  Score=155.52  Aligned_cols=140  Identities=18%  Similarity=0.177  Sum_probs=99.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        +..||||+++........                      . ......|..++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~----------------------~-~~~~~~e~~il   49 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGT--------DELYAVKVLKKDVILQDD----------------------D-VECTMTEKRVL   49 (318)
T ss_pred             CeeeeCCCeEEEEEEECCC--------CCEEEEEEEEHHHHhhhh----------------------H-HHHHHHHHHHH
Confidence            4699999999999998666        889999999753211000                      0 01123466667


Q ss_pred             HHhh-hCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ..+. +.+| .+...+.. ...++||||+. +|.....+.. ..++..++..++.||+.+|.+|| ..|+|||||||.||
T Consensus        50 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~Ni  127 (318)
T cd05570          50 ALAGKHPFLTQLHSCFQTKDRLFFVMEYVN-GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLH-ERGIIYRDLKLDNV  127 (318)
T ss_pred             HhccCCCCccceeeEEEcCCEEEEEEcCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEccCCCHHHe
Confidence            6663 3332 22222222 34689999995 3443333333 36888899999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.+..
T Consensus       128 ll~~~~~~kl~Dfg~~~~  145 (318)
T cd05570         128 LLDSEGHIKIADFGMCKE  145 (318)
T ss_pred             EECCCCcEEecccCCCee
Confidence            994 68999999998854

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1e-16  Score=154.35  Aligned_cols=136  Identities=21%  Similarity=0.234  Sum_probs=94.7

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||+|+||.||+|.+..+        |+.||||++........                     ...  .....|...+.+
T Consensus         1 lG~G~~g~Vy~~~~~~~--------~~~~avK~~~~~~~~~~---------------------~~~--~~~~~e~~~l~~   49 (330)
T cd05586           1 IGKGTFGQVYQVRKKDT--------RRIYAMKVLSKKEIVAK---------------------KEV--AHTIGERNILVR   49 (330)
T ss_pred             CCCCCceEEEEEEECCC--------CCEEEEEEEeHHHHhhh---------------------hHH--HHHHHHHHHHHH
Confidence            79999999999998666        89999999864211000                     000  111234445544


Q ss_pred             hh---hCCCCcccccc----ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        123 MY---SEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       123 L~---~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +.   +.+  ++..+.    ....+|||||+. .|.....+. ...++...+..++.||+.+|.+|| .+|||||||||.
T Consensus        50 ~~~~~~p~--i~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH-~~~ivHrDlkp~  125 (330)
T cd05586          50 TLLDESPF--IVGLKFSFQTDSDLYLVTDYMS-GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLH-KYDIVYRDLKPE  125 (330)
T ss_pred             hccCCCCc--CcceEEEEecCCeEEEEEcCCC-CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHH
Confidence            42   222  111111    134689999995 444433343 345888899999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEcccccc
Q psy10135        195 NMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~  213 (351)
                      |||+. ++.++|+|||.|..
T Consensus       126 Nili~~~~~~kl~Dfg~a~~  145 (330)
T cd05586         126 NILLDATGHIALCDFGLSKA  145 (330)
T ss_pred             HeEECCCCCEEEecCCcCcC
Confidence            99994 68999999998864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.70  E-value=8.6e-17  Score=154.73  Aligned_cols=140  Identities=19%  Similarity=0.185  Sum_probs=98.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.+..+        ++.||||+++........                     ...  ....|...+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~---------------------~~~--~~~~e~~~l   49 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGT--------NQFFAIKALKKDVVLMDD---------------------DVE--CTMVEKRVL   49 (316)
T ss_pred             CeeeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhcc---------------------hHH--HHHHHHHHH
Confidence            4799999999999998666        889999999863211110                     000  112355556


Q ss_pred             HHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ..+ .+.+| .....+.. ...+|||||+. +|.....+.. ..++..++..++.|++.+|.+|| ..|+|||||||.||
T Consensus        50 ~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~-~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH-~~~ivHrdikp~Ni  127 (316)
T cd05619          50 SLAWEHPFLTHLYCTFQTKENLFFVMEYLN-GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLH-SKGIVYRDLKLDNI  127 (316)
T ss_pred             HhccCCCcCcceEEEEEeCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeCCCCHHHE
Confidence            544 33332 11111111 34579999995 4444444443 35788888999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.|..
T Consensus       128 l~~~~~~~kl~Dfg~~~~  145 (316)
T cd05619         128 LLDTDGHIKIADFGMCKE  145 (316)
T ss_pred             EECCCCCEEEccCCcceE
Confidence            994 68899999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0694|consensus

Probab=99.70  E-value=2.5e-17  Score=169.94  Aligned_cols=144  Identities=17%  Similarity=0.137  Sum_probs=102.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+.++||.|+||.|++|....+        ++.||||+++.....-++.-                     -.+  ..|
T Consensus       370 F~~l~vLGkGsFGkV~lae~k~~--------~e~yAIK~LKK~~Il~~d~V---------------------e~~--~~E  418 (694)
T KOG0694|consen  370 FRLLAVLGRGSFGKVLLAELKGT--------NEYYAIKVLKKGDILQRDEV---------------------ESL--MCE  418 (694)
T ss_pred             eEEEEEeccCcCceEEEEEEcCC--------CcEEEEEEeeccceeccccH---------------------HHH--HHH
Confidence            78899999999999999999777        89999999997532211111                     111  123


Q ss_pred             HHHHHHhhhC-C-CCccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSE-G-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~-g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      -+++.-+... - +..--.+.. .+.+.||||+. +|. +.... ...+++..++-++..|+.+|.+|| .+|||+||||
T Consensus       419 krI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~-Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH-~~~IIYRDlK  495 (694)
T KOG0694|consen  419 KRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA-GGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLH-ENGIIYRDLK  495 (694)
T ss_pred             HHHHHHhccCCeEeecccccccCCeEEEEEEecC-CCc-EEEEEecccccHHHHHHHHHHHHHHHHHHH-hcCceeeecc
Confidence            3333332211 0 000001222 34479999996 454 33333 356999999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..|||++ +|+++|+|||+|.+-
T Consensus       496 LdNiLLD~eGh~kiADFGlcKe~  518 (694)
T KOG0694|consen  496 LDNLLLDTEGHVKIADFGLCKEG  518 (694)
T ss_pred             hhheEEcccCcEEeccccccccc
Confidence            9999995 799999999999764

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.70  E-value=1e-16  Score=150.44  Aligned_cols=143  Identities=15%  Similarity=0.103  Sum_probs=106.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|++|.||+|.+..+        |+.||||.++......                     ..    ....+
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~~~--------~~~~~iK~~~~~~~~~---------------------~~----~~~~~   52 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSKLT--------GQLVALKEIRLEHEEG---------------------AP----FTAIR   52 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEcCC--------CcEEEEEEEecccccC---------------------Cc----hhHHH
Confidence            388999999999999999998556        8999999987521100                     00    01236


Q ss_pred             HHHHHHHhhhCCCCccc-cccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLNVPK-PILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~-pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+.+++++.+.+|.... .+.. ...++||||++  |.....+..  ..++...+..++.|++.+|.+|| ..|+||+||
T Consensus        53 E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH-~~~i~H~dl  129 (291)
T cd07844          53 EASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD--TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH-QRRVLHRDL  129 (291)
T ss_pred             HHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC--CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecccC
Confidence            88999999877643221 2221 34579999995  433332322  24778889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       130 ~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844         130 KPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             CHHHEEEcCCCCEEECcccccccc
Confidence            99999995 688999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1163|consensus

Probab=99.69  E-value=1.1e-16  Score=148.64  Aligned_cols=149  Identities=20%  Similarity=0.256  Sum_probs=103.6

Q ss_pred             HHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChh
Q psy10135         27 LFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPR  106 (351)
Q Consensus        27 L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r  106 (351)
                      +..++.-| -|.+.+.||+|+||.+|.|....+        |..||||+-+...                +|      | 
T Consensus         8 ~~~~iv~g-ky~lvrkiGsGSFGdIy~~~~i~~--------ge~VAiK~Es~~a----------------~h------p-   55 (341)
T KOG1163|consen    8 LEELIVGG-KYKLVRKIGSGSFGDIYLGISITS--------GEEVAIKLESSKA----------------KH------P-   55 (341)
T ss_pred             hhhheecc-ceEEEEeecCCchhheeeeeeccC--------CceEEEEeecccC----------------CC------c-
Confidence            33444444 599999999999999999998676        9999999865421                11      0 


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        107 KMVRTWAEKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       107 ~~vk~~aekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                         ++  ..|.+.-..|. .|+-.|.....    ..++|||+++|..-..+-.+-...++-..+..++.|++.-+.++| 
T Consensus        56 ---qL--~yEskvY~iL~-~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH-  128 (341)
T KOG1163|consen   56 ---QL--LYESKVYRILQ-GGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH-  128 (341)
T ss_pred             ---ch--hHHHHHHHHhc-cCCCCchhhhhccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH-
Confidence               00  12333333332 23444444332    346899999962211122222335777788899999999999999 


Q ss_pred             hCCccccCCCCCceEE----eCCeEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLV----HKATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi----~~g~l~IIDFG~Av~~  214 (351)
                      ..++|||||||.|+|.    +.+++++||||+|...
T Consensus       129 ~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen  129 LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence            5899999999999999    3579999999999654

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.69  E-value=1.6e-16  Score=149.72  Aligned_cols=146  Identities=20%  Similarity=0.163  Sum_probs=107.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        ++.||||+++.......                     .  .......|
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~~~--------~~~~aiK~~~~~~~~~~---------------------~--~~~~~~~e   51 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHKGS--------GKYYALKILSKAKIVKL---------------------K--QVEHVLNE   51 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEcCC--------CCEEEEEEEEHHHhhhh---------------------h--HHHHHHHH
Confidence            78899999999999999998666        89999999875311000                     0  01123468


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|+++.+.+| .+...+.. ...++||||+. +|.....+. ...++...+..+..||+.+|.+|| .+|++|+||+|
T Consensus        52 ~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH-~~~i~H~dl~p  129 (290)
T cd05580          52 KRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVP-GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLH-SLDIVYRDLKP  129 (290)
T ss_pred             HHHHHhCCCCCccceeeEEEcCCeEEEEEecCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCH
Confidence            888999976653 22222222 34579999995 343333332 245788888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .|||+. ++.++|+|||.+....
T Consensus       130 ~nili~~~~~~kl~dfg~~~~~~  152 (290)
T cd05580         130 ENLLLDSDGYIKITDFGFAKRVK  152 (290)
T ss_pred             HHEEECCCCCEEEeeCCCccccC
Confidence            999995 6899999999987653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0597|consensus

Probab=99.69  E-value=2.3e-17  Score=167.22  Aligned_cols=143  Identities=19%  Similarity=0.197  Sum_probs=109.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|...||.|+||.||+|+.+.+        .+.||||.+......-|+                      + + ...+|
T Consensus         4 yhv~e~iG~Gsfg~VYKgrrK~t--------~~~vAik~i~K~gr~~k~----------------------l-~-~l~~e   51 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGRRKYT--------IQVVAIKFIDKSGRNEKE----------------------L-K-NLRQE   51 (808)
T ss_pred             hhHHHHhcCCccceeeecccccc--------eeEEEEEEehhcCCchHH----------------------H-H-HHHHH
Confidence            66778999999999999998666        899999998764322111                      0 0 12468


Q ss_pred             HHHHHHhhhCCC-Ccccccccc-ceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLK-SHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~-~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ++++.+|.+.+| ..-+-|... ..++|.||+  -|.....|. +..++++.++.+..+++.+|.+|| +.+|+|||+||
T Consensus        52 v~i~r~lkHpniv~m~esfEt~~~~~vVte~a--~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLh-s~rilhrd~kP  128 (808)
T KOG0597|consen   52 VRILRSLKHPNIVEMLESFETSAHLWVVTEYA--VGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLH-SNRILHRDMKP  128 (808)
T ss_pred             HHHHHhcCCcchhhHHHhhcccceEEEEehhh--hhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-hcCcccccCCc
Confidence            888888877653 233333333 447999999  565444444 356999999999999999999999 69999999999


Q ss_pred             CceEE-eCCeEEEEEccccccC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      .|||+ .+|.++++|||+|+-.
T Consensus       129 qniLl~~~~~~KlcdFg~Ar~m  150 (808)
T KOG0597|consen  129 QNILLEKGGTLKLCDFGLARAM  150 (808)
T ss_pred             ceeeecCCCceeechhhhhhhc
Confidence            99999 5689999999999643

>KOG0660|consensus

Probab=99.69  E-value=4.8e-17  Score=157.58  Aligned_cols=144  Identities=18%  Similarity=0.188  Sum_probs=110.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |...+.||.|++|.|+.|.+..+        |+.||||-+..   .|..                     ...-..+-+|
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t--------~~~VAIKKi~~---~F~~---------------------~~~akRtlRE   71 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRT--------GEKVAIKKILN---PFEN---------------------QIDAKRTLRE   71 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCC--------CCEeehhhhhh---hhhc---------------------hHHHHHHHHH
Confidence            44568999999999999999777        99999996643   2221                     1112235679


Q ss_pred             HHHHHHhhhCCCC------ccccc-cccceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLN------VPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~------vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ++.|+.+.+.+|-      .|... ..+..++|+|+++  .....-++... |+...+.-+..||+.+|.++| .++++|
T Consensus        72 lklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe--tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiH-SAnViH  148 (359)
T KOG0660|consen   72 LKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME--TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIH-SANVIH  148 (359)
T ss_pred             HHHHHHhcCCCcceEEeecccccccccceeEEehhHHh--hHHHHHHHcCccccHHHHHHHHHHHHHhcchhh-cccccc
Confidence            9999999876632      22111 2366789999994  33444455555 899999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||.|+|++ +..++|+|||+|+..+
T Consensus       149 RDLKPsNll~n~~c~lKI~DFGLAR~~~  176 (359)
T KOG0660|consen  149 RDLKPSNLLLNADCDLKICDFGLARYLD  176 (359)
T ss_pred             cccchhheeeccCCCEEeccccceeecc
Confidence            99999999995 6789999999998774

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.69  E-value=1.5e-16  Score=149.03  Aligned_cols=143  Identities=17%  Similarity=0.150  Sum_probs=104.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |..||+|.++.....                       ..  .....+|
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~--------~~~~a~k~~~~~~~~-----------------------~~--~~~~~~e   49 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVLHRPT--------GVTMAMKEIRLELDE-----------------------SK--FNQIIME   49 (286)
T ss_pred             hhhhhhhcccCCeEEEEEEEcCC--------CcEEEEEEeecccCH-----------------------HH--HHHHHHH
Confidence            67889999999999999998556        899999988642100                       00  0112457


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccc-ccC----CCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKL-KDT----PLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L-~~~----~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ...|.++.+.++ ++...+. ....++||||+.  |..+..+ ...    .++...+..++.+++.+|.+||..+|++|+
T Consensus        50 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~  127 (286)
T cd06622          50 LDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMD--AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHR  127 (286)
T ss_pred             HHHHHhcCCCcHHhhhhheecCCeEEEEEeecC--CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeC
Confidence            777887765542 1111111 245679999994  4333332 222    578888999999999999999955799999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.+...
T Consensus       128 dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622         128 DVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             CCCHHHEEECCCCCEEEeecCCcccc
Confidence            9999999995 578999999988644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.69  E-value=1.2e-16  Score=162.12  Aligned_cols=178  Identities=21%  Similarity=0.232  Sum_probs=115.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccc------cccccccccCCChhHHH-----
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNG------EFRFRHGYCKKNPRKMV-----  109 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~g------e~Rfr~~~~k~n~r~~v-----  109 (351)
                      .+||+|++|.||+|+. .+        |+.||||+.+++....-..+-.+-.      +.++.. ...-++..++     
T Consensus       123 ~plasaSigQVh~A~l-~~--------G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~-~~~~~~~~~~~e~~~  192 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VD--------GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPD-SRRLRPTEVVKEFEK  192 (437)
T ss_pred             cceeeeehhheEEEEe-cC--------CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCcc-ccccCHHHHHHHHHH
Confidence            6899999999999998 67        9999999999875332111110000      000000 0001222222     


Q ss_pred             ----HHHHHHHHHHHHHhhh-----CCCCcccccc--ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHH
Q psy10135        110 ----RTWAEKEMRNLTRMYS-----EGLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVV  175 (351)
Q Consensus       110 ----k~~aekE~~nL~rL~~-----~gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~  175 (351)
                          .+....|.+|+.++..     .++.+|+++.  ....+|||||+  +|..+..+..   ...   +...++..++.
T Consensus       193 ~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i--~G~~L~~~~~~~~~~~---~~~~ia~~~~~  267 (437)
T TIGR01982       193 TLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWI--DGIPLSDIAALDEAGL---DRKALAENLAR  267 (437)
T ss_pred             HHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeE--CCcccccHHHHHhcCC---CHHHHHHHHHH
Confidence                2334579999999864     4688999885  35679999999  5655443321   112   23456666665


Q ss_pred             -HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCCCCChH-------HHHHhhhhhhhhcc
Q psy10135        176 -MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHAL-------QFLRKDCDNVTVFV  234 (351)
Q Consensus       176 -~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~-------~fl~~D~~~v~~ff  234 (351)
                       .+..+| ..|++|||+||.|||+. +|+++++|||++...+.....       .++.+|...+.+.+
T Consensus       268 ~~l~ql~-~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l  334 (437)
T TIGR01982       268 SFLNQVL-RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVH  334 (437)
T ss_pred             HHHHHHH-hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence             467788 59999999999999994 689999999999887643221       33466666665544

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.69  E-value=1.2e-16  Score=147.66  Aligned_cols=140  Identities=15%  Similarity=0.162  Sum_probs=105.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.. ..        +..+|+|++++....                           .....+|
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~-~~--------~~~~~~k~~~~~~~~---------------------------~~~~~~E   51 (260)
T cd05070           8 LQLIKKLGNGQFGEVWMGTW-NG--------NTKVAVKTLKPGTMS---------------------------PESFLEE   51 (260)
T ss_pred             hhhhheeccccCceEEEEEe-cC--------CceeEEEEecCCCCC---------------------------HHHHHHH
Confidence            68889999999999999987 55        778999998763210                           0012468


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|+++.+.++ +....+.....++||||+. .|.....+..   ..++...+..++.+++.+|.+|| ..|++|+|||
T Consensus        52 ~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~di~  129 (260)
T cd05070          52 AQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMS-KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE-RMNYIHRDLR  129 (260)
T ss_pred             HHHHHhcCCCceEEEEeEECCCCcEEEEEecC-CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCc
Confidence            888999877653 3333333345689999995 3333333322   24777888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.+...
T Consensus       130 p~Nili~~~~~~~l~dfg~~~~~  152 (260)
T cd05070         130 SANILVGDGLVCKIADFGLARLI  152 (260)
T ss_pred             cceEEEeCCceEEeCCceeeeec
Confidence            9999995 578999999998654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.69  E-value=2.2e-16  Score=147.53  Aligned_cols=142  Identities=16%  Similarity=0.119  Sum_probs=103.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCc----EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEK----EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~----~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++...||+|+||.||+|....+        |.    .||||+++....                       .  ....
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~--------~~~~~~~va~K~~~~~~~-----------------------~--~~~~   54 (279)
T cd05109           8 ELKKVKVLGSGAFGTVYKGIWIPD--------GENVKIPVAIKVLRENTS-----------------------P--KANK   54 (279)
T ss_pred             heeeeeecCCCCCceEEEEEEecC--------CCccceEEEEEEecCCCC-----------------------H--HHHH
Confidence            378889999999999999986444        44    589998864210                       0  0011


Q ss_pred             HHHHHHHHHHHhhhCCCCcccccc---ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPIL---LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~---~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      ...+|...+.++.+.++.  ..+.   ....+++|+|+. .|.....+..  ..++...+..++.|++.+|.+|| ..|+
T Consensus        55 ~~~~e~~~l~~~~~~~i~--~~~~~~~~~~~~l~~~~~~-~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i  130 (279)
T cd05109          55 EILDEAYVMAGVGSPYVC--RLLGICLTSTVQLVTQLMP-YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE-EVRL  130 (279)
T ss_pred             HHHHHHHHHHhcCCCCCc--eEEEEEcCCCcEEEEEcCC-CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HCCe
Confidence            234577777777665532  2222   234579999996 5555544543  24788889999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|+||||.|||+. ++.++|+|||.|...
T Consensus       131 iH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109         131 VHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             eccccccceEEEcCCCcEEECCCCceeec
Confidence            9999999999994 588999999998654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.69  E-value=1.8e-16  Score=151.58  Aligned_cols=146  Identities=15%  Similarity=0.072  Sum_probs=103.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+    ....+..||||+++..... .                        .......
T Consensus         8 ~f~~~~~lg~G~~g~Vy~~~~~~~----~~~~~~~vaiK~~~~~~~~-~------------------------~~~~~~~   58 (316)
T cd05108           8 EFKKIKVLGSGAFGTVYKGLWIPE----GEKVKIPVAIKELREATSP-K------------------------ANKEILD   58 (316)
T ss_pred             hceeeeeeecCCCceEEEEEEecC----CCccceeEEEEeccccCCH-H------------------------HHHHHHH
Confidence            388999999999999999986333    0001234899988642100 0                        0111235


Q ss_pred             HHHHHHHhhhCCCCcccccc---ccceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL---LKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~---~~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |...++.+.+.+|  .+.+.   ....++||+|+. .|.....+...  .++...+..++.||+.+|.+|| ..|+||||
T Consensus        59 e~~~l~~l~h~ni--v~~~g~~~~~~~~~v~e~~~-~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH-~~~iiH~d  134 (316)
T cd05108          59 EAYVMASVDNPHV--CRLLGICLTSTVQLITQLMP-FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-ERRLVHRD  134 (316)
T ss_pred             HHHHHHhCCCCCC--CeEEEEEcCCCceeeeecCC-CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-hcCeeccc
Confidence            7788888876653  22232   244579999996 55554444432  4677778889999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       135 lkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108         135 LAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             cchhheEecCCCcEEEccccccccc
Confidence            999999995 588999999999743

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0670|consensus

Probab=99.69  E-value=8.1e-17  Score=162.02  Aligned_cols=154  Identities=21%  Similarity=0.256  Sum_probs=114.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|.+-.|.|-|++|.+|.+..-        |..|||||++..-.-                           ...-.+|
T Consensus       434 Y~V~~~~GkGvFs~Vvra~D~~r--------~~~vAiKIIRnNE~M---------------------------~KtGl~E  478 (752)
T KOG0670|consen  434 YEVQGYTGKGVFSTVVRARDQAR--------GQEVAIKIIRNNEVM---------------------------HKTGLKE  478 (752)
T ss_pred             eEEEeccccceeeeeeeccccCC--------CCeeEEEEeecchHH---------------------------hhhhhHH
Confidence            89999999999999999998655        889999999874321                           1223579


Q ss_pred             HHHHHHhhhCC----CCccccc---cc-cceEEEEcccCcccccccccc----cCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        117 MRNLTRMYSEG----LNVPKPI---LL-KSHVLLMTFIGEDGWPAAKLK----DTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       117 ~~nL~rL~~~g----i~vP~pi---~~-~~~vLVMEfig~~G~~~~~L~----~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +.+|++|..+.    ..|...+   .. +..|||+|-+.  -.+-..|+    +.+|....++.+..||.-+|..|- +|
T Consensus       479 leiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls--lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK-~c  555 (752)
T KOG0670|consen  479 LEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS--LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK-KC  555 (752)
T ss_pred             HHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh--chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH-hc
Confidence            99999998763    3333332   22 34489999883  22222233    345667778899999999999997 69


Q ss_pred             CccccCCCCCceEEeC--CeEEEEEccccccCCCCChHHHHHhhhhhhhhcc
Q psy10135        185 HLVHADLSEYNMLVHK--ATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV  234 (351)
Q Consensus       185 glVH~DLkp~NILi~~--g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff  234 (351)
                      ||+|+||||.|||++.  ..++|||||.|.......---||      |.+||
T Consensus       556 ~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYL------VSRFY  601 (752)
T KOG0670|consen  556 GVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYL------VSRFY  601 (752)
T ss_pred             CeeecccCccceEeccCcceeeeccCccccccccccccHHH------HHHhc
Confidence            9999999999999975  56999999999877654444444      56666

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.69  E-value=3.3e-16  Score=148.69  Aligned_cols=143  Identities=17%  Similarity=0.190  Sum_probs=107.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |+.||||.+......                          .......
T Consensus        20 ~y~~~~~lg~g~~g~v~~~~~~~~--------~~~vaiK~~~~~~~~--------------------------~~~~~~~   65 (297)
T cd06656          20 KYTRFEKIGQGASGTVYTAIDIAT--------GQEVAIKQMNLQQQP--------------------------KKELIIN   65 (297)
T ss_pred             hceeeeeeccCCCeEEEEEEECCC--------CCEEEEEEEecCccc--------------------------hHHHHHH
Confidence            389999999999999999998566        899999988642110                          0112356


Q ss_pred             HHHHHHHhhhCCCCc-ccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGLNV-PKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi~v-P~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..+..+.+.++.. ...+. ....++||||+. +|.....+....++..++..++.+++.+|.+|| ..|++|+||||
T Consensus        66 e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH-~~~i~H~dL~p  143 (297)
T cd06656          66 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA-GGSLTDVVTETCMDEGQIAAVCRECLQALDFLH-SNQVIHRDIKS  143 (297)
T ss_pred             HHHHHHhCCCCCEeeEEEEEecCCEEEEeecccC-CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCH
Confidence            788888887665321 11111 245689999995 344333344456788888999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||.+...
T Consensus       144 ~Nili~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656         144 DNILLGMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             HHEEECCCCCEEECcCccceEc
Confidence            999995 688999999988644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.69  E-value=2.1e-16  Score=152.56  Aligned_cols=143  Identities=15%  Similarity=0.142  Sum_probs=106.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |+.||||+++...     ...+                    ......
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~~~--------~~~vaiK~~~~~~-----~~~~--------------------~~~~~~   52 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHKPT--------GVKVAIKKISPFE-----HQTF--------------------CQRTLR   52 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEcCC--------CCeEEEEEecccc-----cchh--------------------HHHHHH
Confidence            489999999999999999998666        8999999986411     0000                    011235


Q ss_pred             HHHHHHHhhhCCC-Ccccccc------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|.++.+.++ .+...+.      ....++||||++  +.....+....++...+..++.|++.+|.+|| ..|+||
T Consensus        53 E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH-~~~ivH  129 (336)
T cd07849          53 EIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME--TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIH-SANVLH  129 (336)
T ss_pred             HHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc--cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence            7888888876553 2221111      123579999995  44444455557888899999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||||.|||+. ++.++|+|||.+...
T Consensus       130 ~dlkp~Nill~~~~~~kl~dfg~~~~~  156 (336)
T cd07849         130 RDLKPSNLLLNTNCDLKICDFGLARIA  156 (336)
T ss_pred             cCCCHHHEEECCCCCEEECcccceeec
Confidence            99999999995 578999999988654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.69  E-value=2.1e-16  Score=146.05  Aligned_cols=141  Identities=14%  Similarity=0.084  Sum_probs=104.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.. .+        +..||||.++.....                           .....+|
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~-~~--------~~~v~iK~~~~~~~~---------------------------~~~~~~e   51 (261)
T cd05068           8 IQLLRKLGAGQFGEVWEGLW-NN--------TTPVAVKTLKPGTMD---------------------------PKDFLAE   51 (261)
T ss_pred             eeeEEEecccCCccEEEEEe-cC--------CeEEEEEeeCCCccc---------------------------HHHHHHH
Confidence            78899999999999999987 55        678999998753210                           0012458


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+.++. +...+. ....++||||+. +|.....+..   ..++...+..++.+++.++.+|| ..|++|+||
T Consensus        52 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl  129 (261)
T cd05068          52 AQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK-YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE-AQNYIHRDL  129 (261)
T ss_pred             HHHHHHCCCCCccceeEEEecCCCeeeeeeccc-CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccC
Confidence            8889988766532 111111 244589999994 3433333332   24778888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+. ++.++|+|||.+....
T Consensus       130 ~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068         130 AARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             CcceEEEcCCCCEEECCcceEEEcc
Confidence            99999995 5889999999986543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.69  E-value=2.2e-16  Score=146.11  Aligned_cols=143  Identities=17%  Similarity=0.140  Sum_probs=106.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....                          ......+|
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~--------~~~~aik~~~~~~~~--------------------------~~~~~~~e   56 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHT--------GELAAVKIIKLEPGD--------------------------DFSLIQQE   56 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCC--------CeEEEEEEEecCccc--------------------------hHHHHHHH
Confidence            89999999999999999998666        899999998642100                          00123568


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.++.+.++. ....+. ....++||||++ .|.....+. ...++...+..++.|++.+|.+|| ..|++|+||+|
T Consensus        57 ~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p  134 (267)
T cd06646          57 IFMVKECKHCNIVAYFGSYLSREKLWICMEYCG-GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLH-SKGKMHRDIKG  134 (267)
T ss_pred             HHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCH
Confidence            8888888766532 111111 244679999995 343333332 345788888999999999999999 58999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .|||+. ++.++|+|||.+....
T Consensus       135 ~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646         135 ANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             HHEEECCCCCEEECcCccceeec
Confidence            999995 5789999999987553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.69  E-value=1.5e-16  Score=149.37  Aligned_cols=139  Identities=17%  Similarity=0.124  Sum_probs=99.3

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||+|+||.||+|....+        |+.||+|.+........                       .....+..|..+|.+
T Consensus         1 lg~G~~g~Vy~~~~~~~--------~~~~a~K~~~~~~~~~~-----------------------~~~~~~~~E~~il~~   49 (277)
T cd05607           1 LGKGGFGEVCAVQVKNT--------GKMYACKKLDKKRLKKK-----------------------SGEKMALLEKEILEK   49 (277)
T ss_pred             CCCCCceEEEEEEEccC--------CcEEEEEEEcHHHhhcc-----------------------hhhHHHHHHHHHHHh
Confidence            79999999999998666        99999999864221100                       011123458888998


Q ss_pred             hhhCCCC-ccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        123 MYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       123 L~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      +.+.+|. +...+.. ...++||||+. +|.....+.   ...++...+..++.|++.+|.+|| ..|+|||||||.|||
T Consensus        50 l~hp~i~~~~~~~~~~~~~~lv~e~~~-g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~dikp~Nil  127 (277)
T cd05607          50 VNSPFIVNLAYAFESKTHLCLVMSLMN-GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH-SMDIVYRDMKPENVL  127 (277)
T ss_pred             cCCCcEEEEEEEEecCCeEEEEEecCC-CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH-HCCEEEccCChHhEE
Confidence            8776532 1122222 34579999995 333322222   124677788889999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEccccccC
Q psy10135        198 VH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~~  214 (351)
                      +. ++.++|+|||.+...
T Consensus       128 i~~~~~~~l~Dfg~~~~~  145 (277)
T cd05607         128 LDDQGNCRLSDLGLAVEL  145 (277)
T ss_pred             EcCCCCEEEeeceeeeec
Confidence            95 678999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.69  E-value=3.2e-16  Score=162.31  Aligned_cols=176  Identities=18%  Similarity=0.212  Sum_probs=116.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |...+.||+|+||.||+|.. .         +..+++|+........+.                  ...........+|
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~-~---------~~~~v~k~~~~~~~~~~~------------------~~~~~~~~~~~~E  386 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEY-L---------GRDAVIKERVPKGYRHPE------------------LDERLRTERTRAE  386 (535)
T ss_pred             cCccceeccCCcEEEEEEee-c---------CccceeEEEecccccchh------------------HHHHHHHHHHHHH
Confidence            45578999999999999987 3         455666654321100000                  0011223445689


Q ss_pred             HHHHHHhhhCCCCccccccc--cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL--KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +.+|.++...++.+|..+..  ...+|||||++  |..+..+..      ....++.+++.+|.+|| ..|+|||||||.
T Consensus       387 ~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~--g~~L~~~l~------~~~~~~~~i~~~L~~lH-~~giiHrDlkp~  457 (535)
T PRK09605        387 ARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIG--GKDLKDVLE------GNPELVRKVGEIVAKLH-KAGIVHGDLTTS  457 (535)
T ss_pred             HHHHHhhcccCCCeeEEEEEeCCCCEEEEEecC--CCcHHHHHH------HHHHHHHHHHHHHHHHH-hCCCccCCCChH
Confidence            99999999888887776654  36789999994  543332211      34678999999999999 599999999999


Q ss_pred             ceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccc-cCCCCCc-HHHHHHhhhh
Q psy10135        195 NMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI-LNPVSDD-DEKIFKKWDS  252 (351)
Q Consensus       195 NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~-~~~~~~~-~~~~~~~~~~  252 (351)
                      |||+.++.++|||||.|...+..   .-+..++.-+...|. +.+...+ .+.++++|..
T Consensus       458 NILl~~~~~~liDFGla~~~~~~---~d~a~~l~~~~~~~~~~~~~~~~~~~~fl~gY~~  514 (535)
T PRK09605        458 NFIVRDDRLYLIDFGLGKYSDLI---EDKAVDLHVLKQSLESTHYDFEELWEAFLEGYRE  514 (535)
T ss_pred             HEEEECCcEEEEeCcccccCCch---HhhhhhHHHHHHHhcCCCCCHHHHHHHHHHhhcc
Confidence            99998899999999999765432   222333333333332 2222222 6677777754

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.69  E-value=1.5e-16  Score=146.88  Aligned_cols=142  Identities=15%  Similarity=0.131  Sum_probs=106.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .+        ++.||+|.++....                      +     ......
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~-~~--------~~~~a~K~~~~~~~----------------------~-----~~~~~~   50 (260)
T cd05067           7 TLKLVKKLGAGQFGEVWMGYY-NG--------HTKVAIKSLKQGSM----------------------S-----PEAFLA   50 (260)
T ss_pred             HceeeeeeccCccceEEeeec-CC--------CceEEEEEecCCCC----------------------c-----HHHHHH
Confidence            378899999999999999987 56        88999998764211                      0     011245


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |...|+++.+.++ +....+.....++||||+. .|.....+..   ..++..++..++.+++.+|.+|| .+|++|+||
T Consensus        51 E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH-~~~i~H~dl  128 (260)
T cd05067          51 EANLMKQLQHPRLVRLYAVVTQEPIYIITEYME-NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE-RKNYIHRDL  128 (260)
T ss_pred             HHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh-cCCeecccc
Confidence            8888898877653 2222233345689999995 3433333322   34777888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.||+++ ++.++|+|||.+....
T Consensus       129 ~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067         129 RAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             cHHhEEEcCCCCEEEccCcceeecC
Confidence            99999995 5789999999986543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.69  E-value=1.7e-16  Score=148.02  Aligned_cols=143  Identities=14%  Similarity=0.119  Sum_probs=104.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |..||||+++.....    ..                    ......+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~----~~--------------------~~~~~~~e   49 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKT--------GQIVAMKKIRLESEE----EG--------------------VPSTAIRE   49 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCC--------CcEEEEEEecccccc----CC--------------------chHHHHHH
Confidence            78889999999999999998666        899999998652110    00                    00122457


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc----cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK----DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~----~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..+.++.+.++ ++...+. ....++||||++  |.....+.    ...++...+..++.||+.+|.+|| ..|++|+|
T Consensus        50 ~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~d  126 (285)
T cd07861          50 ISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS--MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH-SRRVLHRD  126 (285)
T ss_pred             HHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC--CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH-hCCeeecC
Confidence            888888876543 2222222 244589999995  43222221    135788889999999999999999 59999999


Q ss_pred             CCCCceEE-eCCeEEEEEccccccC
Q psy10135        191 LSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+ .++.++|+|||.+...
T Consensus       127 l~p~nil~~~~~~~~l~dfg~~~~~  151 (285)
T cd07861         127 LKPQNLLIDNKGVIKLADFGLARAF  151 (285)
T ss_pred             CCHHHEEEcCCCcEEECcccceeec
Confidence            99999999 5689999999988644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.69  E-value=2.4e-16  Score=160.84  Aligned_cols=142  Identities=15%  Similarity=0.189  Sum_probs=105.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+...||.|++|.||.|....+       .+..||+|.+.....                          .....+..
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~-------~~~~vv~K~~~~~~~--------------------------~~~~~~~~  114 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSD-------PKEKVVAKFVMLNDE--------------------------RQAAYARS  114 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCC-------CCeEEEEEEcccCCH--------------------------HHHHHHHH
Confidence            499999999999999999987332       156789997543110                          01122456


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |+..|.++.+.+|  ++.+.    ....+|||||+. +|.+...|.     ..+++..++..++.||+.+|.+|| ..||
T Consensus       115 E~~~l~~l~Hpni--v~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~i  190 (478)
T PTZ00267        115 ELHCLAACDHFGI--VKHFDDFKSDDKLLLIMEYGS-GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH-SRKM  190 (478)
T ss_pred             HHHHHHhCCCCCE--eEEEEEEEECCEEEEEEECCC-CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCE
Confidence            8899999987763  33332    245689999995 344433232     235788888899999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||.|||+. ++.++|+|||.|...
T Consensus       191 vHrDlkp~NIll~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        191 MHRDLKSANIFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             EECCcCHHhEEECCCCcEEEEeCcCceec
Confidence            9999999999995 688999999998754

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.9e-16  Score=145.80  Aligned_cols=147  Identities=19%  Similarity=0.134  Sum_probs=107.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.++||.|++|.||.|.+..+        ++.||||.++........                    ... ......|
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~--------~~~~~lk~~~~~~~~~~~--------------------~~~-~~~~~~e   54 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDT--------GRELAVKQVPFDPDSPET--------------------KKE-VNALECE   54 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCC--------CcEEEEEEEeecccchhh--------------------HHH-HHHHHHH
Confidence            78899999999999999998556        899999998753211000                    001 1234678


Q ss_pred             HHHHHHhhhCCCCcc-cccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVP-KPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..++++.+.++... ..+. ....++||||+. +|.....+.. ..++...+..++.|++.+|.+|| .+|++|+||+|
T Consensus        55 ~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~dl~p  132 (263)
T cd06625          55 IQLLKNLQHERIVQYYGCLRDDETLSIFMEYMP-GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH-SNMIVHRDIKG  132 (263)
T ss_pred             HHHHHhCCCCCeeeeEEEEccCCeEEEEEEECC-CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCH
Confidence            889999987664211 1111 245679999995 3333333332 35777888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .||++. ++.++|+|||.+...
T Consensus       133 ~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625         133 ANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             HHEEEcCCCCEEEeecccceec
Confidence            999995 589999999998644

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.69  E-value=1.6e-16  Score=156.75  Aligned_cols=148  Identities=16%  Similarity=0.105  Sum_probs=100.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.....   .....+..||||+++.....                       . . .....+|
T Consensus        37 ~~~~~~LG~G~fG~V~~~~~~~~---~~~~~~~~vavK~l~~~~~~-----------------------~-~-~~~~~~E   88 (375)
T cd05104          37 LSFGKTLGAGAFGKVVEATAYGL---FKSDAAMTVAVKMLKPSAHL-----------------------T-E-REALMSE   88 (375)
T ss_pred             eehhheecCCccceEEEEEEecc---ccCccceeEEEEeccCCcCc-----------------------H-H-HHHHHHH
Confidence            88999999999999999974110   00112678999998753100                       0 0 1123468


Q ss_pred             HHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCccccccccccc-----------------------------------
Q psy10135        117 MRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----------------------------------  158 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----------------------------------  158 (351)
                      +.+|..+ .+.+| .+...+. ....++||||+. .|.....+..                                   
T Consensus        89 i~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  167 (375)
T cd05104          89 LKVLSYLGNHINIVNLLGACTVGGPTLVITEYCC-YGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNE  167 (375)
T ss_pred             HHHHHHhcCCcceeeeeeeeccCCcceeeehhcc-CCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhh
Confidence            8888888 44442 2211111 244689999995 3433222211                                   


Q ss_pred             -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        159 -----------------------------------------TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       159 -----------------------------------------~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                                                               ..++...+..++.||+.+|.+|| .+|+|||||||.|||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nil  246 (375)
T cd05104         168 YMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA-SKNCIHRDLAARNIL  246 (375)
T ss_pred             hhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCchhhEE
Confidence                                                     13566778889999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEccccccC
Q psy10135        198 VH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~~  214 (351)
                      +. ++.++|+|||.|...
T Consensus       247 l~~~~~~kl~DfG~a~~~  264 (375)
T cd05104         247 LTHGRITKICDFGLARDI  264 (375)
T ss_pred             EECCCcEEEecCccceec
Confidence            96 467999999998654

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.69  E-value=2.3e-16  Score=144.87  Aligned_cols=137  Identities=21%  Similarity=0.202  Sum_probs=101.8

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|++|.||+|.+..+        |+.+|+|+++....                         ........+|+..|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~--------~~~~a~k~~~~~~~-------------------------~~~~~~~~~e~~~l   47 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRAD--------NTPVAVKSCRETLP-------------------------PDLKAKFLQEARIL   47 (252)
T ss_pred             CccCcccCccEEEEEEecC--------CceEEEEecCccCC-------------------------HHHHHHHHHHHHHH
Confidence            3689999999999998666        89999998764210                         01122345688888


Q ss_pred             HHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        121 TRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +++.+.+|.  +.+.    ....+|||||+. +|.....+..  ..++...+..+..|++.+|.+|| ..|++|+||||.
T Consensus        48 ~~l~h~~i~--~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~dl~p~  123 (252)
T cd05084          48 KQYSHPNIV--RLIGVCTQKQPIYIVMELVQ-GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE-SKHCIHRDLAAR  123 (252)
T ss_pred             HhCCCCCcc--eEEEEEcCCCCeEEEEeecc-CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccchh
Confidence            888766542  2222    234579999995 3433333322  34778888999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||+. ++.++|+|||.+...
T Consensus       124 nil~~~~~~~kl~dfg~~~~~  144 (252)
T cd05084         124 NCLVTEKNVLKISDFGMSREE  144 (252)
T ss_pred             eEEEcCCCcEEECccccCccc
Confidence            99995 578999999998643

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.68  E-value=1.7e-16  Score=150.81  Aligned_cols=144  Identities=22%  Similarity=0.194  Sum_probs=106.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |+.||||+++....   . ..                    ......+|
T Consensus         9 y~~~~~ig~g~~~~v~~~~~~~~--------~~~vaiK~~~~~~~---~-~~--------------------~~~~~~~E   56 (309)
T cd07845           9 FEKLNRIGEGTYGIVYRARDTTS--------GEIVALKKVRMDNE---R-DG--------------------IPISSLRE   56 (309)
T ss_pred             eeEeeeeeecCCEEEEEEEECCC--------CcEEEEEEEEeccC---C-CC--------------------CcchhhHH
Confidence            88999999999999999998666        99999999875311   0 00                    00112358


Q ss_pred             HHHHHHhhhCCCC-ccccccc---cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL---KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~---~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.++.+.++. +...+..   ...++||||++  +.....+.  ...++..++..++.||+.+|.+|| .+|++|+|
T Consensus        57 ~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~d  133 (309)
T cd07845          57 ITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE--QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH-ENFIIHRD  133 (309)
T ss_pred             HHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC--CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCC
Confidence            8889988776642 2222211   34689999995  42222222  235788889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+|.||++. ++.++|+|||.+....
T Consensus       134 l~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845         134 LKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             CCHHHEEECCCCCEEECccceeeecC
Confidence            999999995 5899999999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=1.7e-16  Score=161.94  Aligned_cols=136  Identities=15%  Similarity=0.131  Sum_probs=105.7

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      |.-|.+.+.||.|+||.||+|.+..+        ++.||||.....                                ..
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~--------~~~vavK~~~~~--------------------------------~~  207 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDY--------PQRVVVKAGWYA--------------------------------SS  207 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCC--------CCEEEEeccccc--------------------------------CH
Confidence            44599999999999999999998666        889999953210                                01


Q ss_pred             HHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      .+|++.|.+|.+.+|  ...+.    ....+|||+++.  |.....+..  ..++..++..++.||+.+|.+|| ..|||
T Consensus       208 ~~E~~iL~~L~HpnI--v~l~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH-~~gIv  282 (461)
T PHA03211        208 VHEARLLRRLSHPAV--LALLDVRVVGGLTCLVLPKYR--SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH-GEGII  282 (461)
T ss_pred             HHHHHHHHHCCCCCC--CcEEEEEEECCEEEEEEEccC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCEE
Confidence            358899999987664  22332    245689999994  544444432  35888899999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.|...
T Consensus       283 HrDLKP~NILl~~~~~vkL~DFGla~~~  310 (461)
T PHA03211        283 HRDIKTENVLVNGPEDICLGDFGAACFA  310 (461)
T ss_pred             ECcCCHHHEEECCCCCEEEcccCCceec
Confidence            999999999995 588999999998643

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.68  E-value=1.5e-16  Score=148.64  Aligned_cols=143  Identities=13%  Similarity=0.103  Sum_probs=106.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |..||+|.++....  .  ..       +             .....+|
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~--------g~~~~~k~~~~~~~--~--~~-------~-------------~~~~~~e   49 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRET--------HEIVALKRVRLDDD--D--EG-------V-------------PSSALRE   49 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCC--------CcEEEEEEeecccc--c--cc-------C-------------ccchhHH
Confidence            78889999999999999998666        99999999875311  0  00       0             0112357


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.++ ++...+. ....++||||++  |.....+.  ...++...+..++.||+.+|.+|| ..|++|+|||
T Consensus        50 i~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH-~~~i~H~dl~  126 (284)
T cd07839          50 ICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD--QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH-SHNVLHRDLK  126 (284)
T ss_pred             HHHHHhcCCCCeeeHHHHhccCCceEEEEecCC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCC
Confidence            888888876553 2111221 244689999995  44433333  245788899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.+...
T Consensus       127 ~~nil~~~~~~~~l~dfg~~~~~  149 (284)
T cd07839         127 PQNLLINKNGELKLADFGLARAF  149 (284)
T ss_pred             HHHEEEcCCCcEEECccchhhcc
Confidence            9999994 688999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.68  E-value=2.9e-16  Score=146.34  Aligned_cols=144  Identities=17%  Similarity=0.143  Sum_probs=106.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||+|++|.||+|.+..+        |+.||||++..+...     ..                   .......|
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~-----~~-------------------~~~~~~~e   50 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRET--------GQIVAIKKFVESEDD-----PV-------------------IKKIALRE   50 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCC--------CcEEEEEEEeecccC-----cc-------------------ccHHHHHH
Confidence            78889999999999999998666        899999998653110     00                   01123468


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.++ .+...+.. ...++||||++  |..+..+.  ...++...+..++.||+.+|.+|| ..|++|+|||
T Consensus        51 ~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH-~~~i~H~dl~  127 (286)
T cd07847          51 IRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCD--HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCH-KHNCIHRDVK  127 (286)
T ss_pred             HHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccC--ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCC
Confidence            888888876553 22222222 34579999995  43333332  235788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.||++. ++.++|+|||.+....
T Consensus       128 p~nil~~~~~~~~l~dfg~~~~~~  151 (286)
T cd07847         128 PENILITKQGQIKLCDFGFARILT  151 (286)
T ss_pred             hhhEEEcCCCcEEECccccceecC
Confidence            9999995 6889999999987553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0610|consensus

Probab=99.68  E-value=9.6e-17  Score=157.90  Aligned_cols=142  Identities=22%  Similarity=0.240  Sum_probs=107.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +++.+.||.|.-|.||+|....+        +..+|+|++....+.-+                     .++.+  ++-|
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t--------~~~fAmKVmdK~~l~~r---------------------kKl~R--a~tE  127 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGT--------NCLFAMKVMDKESLASR---------------------KKLKR--AQTE  127 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCC--------CceEEEEEecHHHHhhh---------------------hHHHH--HHHH
Confidence            67789999999999999998665        78999999976433211                     12333  3446


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      -.+|..|.+.-  .|..|..    .-.|||||||. +|.. -.|.+    ..+++..++-++.+++.||.+|| -.|||.
T Consensus       128 ~eIL~~lDHPF--lPTLYa~fet~~~~cl~meyCp-GGdL-~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH-mlGivY  202 (459)
T KOG0610|consen  128 REILSLLDHPF--LPTLYASFETDKYSCLVMEYCP-GGDL-HSLRQKQPGKRFSESAARFYAAEVLLALEYLH-MLGIVY  202 (459)
T ss_pred             HHHHHhcCCCc--cchhhheeeccceeEEEEecCC-CccH-HHHHhhCCCCccchhhHHHHHHHHHHHHHHHH-hhceee
Confidence            66788887764  4444432    34589999996 4433 33322    24888888999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||+|||++ +|++.|.||.+|...
T Consensus       203 RDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  203 RDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             ccCCcceeEEecCCcEEeeeccccccC
Confidence            99999999995 699999999998654

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.68  E-value=2.6e-16  Score=148.33  Aligned_cols=144  Identities=18%  Similarity=0.176  Sum_probs=105.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|....+        |+.||||++.....    ..       .             ......+|
T Consensus        14 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~aik~~~~~~~----~~-------~-------------~~~~~~~e   61 (310)
T cd07865          14 YEKLAKIGQGTFGEVFKARHKKT--------KQIVALKKVLMENE----KE-------G-------------FPITALRE   61 (310)
T ss_pred             eEEEEEeecCCCEEEEEEEECCC--------CcEEEEEEEeccCC----cC-------C-------------chhHHHHH
Confidence            89999999999999999998666        89999998764210    00       0             01112358


Q ss_pred             HHHHHHhhhCCC-Cccccccc---------cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL---------KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~---------~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +..+.++.+.++ ++...+..         ...++||||++  +.....+..  ..++..++..++.|++.+|.+|| ..
T Consensus        62 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-~~  138 (310)
T cd07865          62 IKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE--HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH-RN  138 (310)
T ss_pred             HHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC--cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HC
Confidence            888888877653 22222111         23489999995  333333332  25788899999999999999999 58


Q ss_pred             CccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        185 HLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |++|+||+|.|||+. ++.++|+|||.+....
T Consensus       139 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865         139 KILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             CeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence            999999999999995 5889999999986553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.68  E-value=2e-16  Score=153.96  Aligned_cols=143  Identities=16%  Similarity=0.161  Sum_probs=105.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|++|.||+|.+..+        |+.||||++.......                      .  ......+
T Consensus        17 ~y~~~~~lg~g~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~----------------------~--~~~~~~~   64 (353)
T cd07850          17 RYQNLKPIGSGAQGIVCAAYDTVT--------GQNVAIKKLSRPFQNV----------------------T--HAKRAYR   64 (353)
T ss_pred             ceEEEEEeccCCCEEEEEEEECCC--------CCEEEEEecCccccCh----------------------h--HHHHHHH
Confidence            389999999999999999998666        9999999875421000                      0  0112346


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..+.++.+.++ .+...+.       ....+|||||++  |.....+.. .++..++..++.|++.+|.+|| .+|++
T Consensus        65 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~-~l~~~~~~~~~~ql~~aL~~LH-~~gi~  140 (353)
T cd07850          65 ELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD--ANLCQVIQM-DLDHERMSYLLYQMLCGIKHLH-SAGII  140 (353)
T ss_pred             HHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC--CCHHHHHhh-cCCHHHHHHHHHHHHHHHHHHH-hCCee
Confidence            8888888876653 2211111       123589999994  543333332 3788888899999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+||||.|||+. ++.++|+|||.|...
T Consensus       141 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  168 (353)
T cd07850         141 HRDLKPSNIVVKSDCTLKILDFGLARTA  168 (353)
T ss_pred             eCCCCHHHEEECCCCCEEEccCccceeC
Confidence            999999999995 688999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.68  E-value=2.2e-16  Score=149.11  Aligned_cols=144  Identities=17%  Similarity=0.152  Sum_probs=104.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        ++.||||.+......  .                     .........|
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~--------~~~~avK~~~~~~~~--~---------------------~~~~~~~~~E   50 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRAT--------GKMYACKKLEKKRIK--K---------------------RKGESMALNE   50 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCC--------CceEEEEEEehhhcc--c---------------------hHHHHHHHHH
Confidence            67788999999999999998666        899999988653110  0                     0001122458


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ..+|.++.+..+ +....+.. ...++||||+. +|.....+.   ...++...+..++.|++.+|.+|| .+|++|+||
T Consensus        51 ~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~iiH~di  128 (285)
T cd05630          51 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMN-GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH-QERIVYRDL  128 (285)
T ss_pred             HHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC-CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCC
Confidence            888888866543 22222222 34579999995 333322232   234788888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||.|||+. ++.++|+|||.+..
T Consensus       129 kp~Nil~~~~~~~~l~Dfg~~~~  151 (285)
T cd05630         129 KPENILLDDHGHIRISDLGLAVH  151 (285)
T ss_pred             CHHHEEECCCCCEEEeeccceee
Confidence            99999995 58899999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0612|consensus

Probab=99.68  E-value=2.7e-17  Score=176.70  Aligned_cols=151  Identities=19%  Similarity=0.171  Sum_probs=109.5

Q ss_pred             HHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChh
Q psy10135         27 LFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPR  106 (351)
Q Consensus        27 L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r  106 (351)
                      +.+|.-.---|+|.++||.|+||.|..++...+        ++.||+|++..-.. .|..                    
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t--------~~VYAMK~lnK~eM-lKr~--------------------  117 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKST--------EKVYAMKILNKWEM-LKRA--------------------  117 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeecc--------ccchhHHHhhHHHH-hhch--------------------
Confidence            334444444599999999999999999998777        99999999864100 0000                    


Q ss_pred             HHHHHHHHHH------HHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHH
Q psy10135        107 KMVRTWAEKE------MRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWR  179 (351)
Q Consensus       107 ~~vk~~aekE------~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~  179 (351)
                      .-+-.|.++.      -+|+..|+=+ +.     +.+..|+||||+. +|..+..|.... +++.-++-+..+|+.||..
T Consensus       118 ~tA~F~EERDimv~~ns~Wiv~LhyA-FQ-----D~~~LYlVMdY~p-GGDlltLlSk~~~~pE~~ArFY~aEiVlAlds  190 (1317)
T KOG0612|consen  118 ETACFREERDIMVFGNSEWIVQLHYA-FQ-----DERYLYLVMDYMP-GGDLLTLLSKFDRLPEDWARFYTAEIVLALDS  190 (1317)
T ss_pred             hHHHHHHHhHHHHcCCcHHHHHHHHH-hc-----CccceEEEEeccc-CchHHHHHhhcCCChHHHHHHHHHHHHHHHHH
Confidence            0112233332      2566666533 11     2245689999997 677766666554 7777777778899999999


Q ss_pred             HHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +| +.|+|||||||.|||++ .|+++|.|||.|...
T Consensus       191 lH-~mgyVHRDiKPDNvLld~~GHikLADFGsClkm  225 (1317)
T KOG0612|consen  191 LH-SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM  225 (1317)
T ss_pred             HH-hccceeccCCcceeEecccCcEeeccchhHHhc
Confidence            99 59999999999999995 799999999998655

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.68  E-value=2.7e-16  Score=146.44  Aligned_cols=145  Identities=15%  Similarity=0.115  Sum_probs=103.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||+|+||.||+|.....     ...+..||||+++.... ..                        ......+|
T Consensus         7 ~~~~~~ig~G~fg~V~~~~~~~~-----~~~~~~vaik~~~~~~~-~~------------------------~~~~~~~e   56 (266)
T cd05064           7 IKIERILGTGRFGELCRGCLKLP-----SKRELPVAIHTLRAGCS-DK------------------------QRRGFLAE   56 (266)
T ss_pred             eEEeeeecccCCCeEEEEEEecC-----CCceeeEEEEecCCCCC-HH------------------------HHHHHHHH
Confidence            78999999999999999976321     11267899999875310 00                        01123467


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.++.+.++. +...+. ....+|||||++ .|.....+..  ..++...+..++.||+.+|.+|| .+|++|||||
T Consensus        57 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH-~~~iiH~dik  134 (266)
T cd05064          57 ALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS-NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS-EMGYVHKGLA  134 (266)
T ss_pred             HHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC-CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccc
Confidence            8888888665532 111111 145689999996 4433333332  35788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++++|||.+..
T Consensus       135 p~nili~~~~~~~l~dfg~~~~  156 (266)
T cd05064         135 AHKVLVNSDLVCKISGFRRLQE  156 (266)
T ss_pred             HhhEEEcCCCcEEECCCccccc
Confidence            9999995 57899999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.68  E-value=2.1e-16  Score=146.43  Aligned_cols=141  Identities=17%  Similarity=0.178  Sum_probs=100.4

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCc--EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEK--EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~--~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.||.|+||.||+|.....        +.  .+|||.++.......                       ... ...+
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~--------~~~~~~a~k~~~~~~~~~~-----------------------~~~-~~~~   49 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQD--------DSILKVAVKTMKIAICTRS-----------------------EME-DFLS   49 (272)
T ss_pred             ccccccCcccCceEEEeEEccC--------CCeeeEEEEecccCcCCHH-----------------------HHH-HHHH
Confidence            5778999999999999987433        43  699998875321100                       011 1245


Q ss_pred             HHHHHHHhhhCCCCcccccc----------ccceEEEEcccCccccccccc-----cc--CCCCHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----------LKSHVLLMTFIGEDGWPAAKL-----KD--TPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----------~~~~vLVMEfig~~G~~~~~L-----~~--~~l~~~~~~~l~~qll~~L~  178 (351)
                      |..+|.++.+.+|  .+.+.          ....++||||+. .|.....+     ..  ..++...+..++.|++.+|.
T Consensus        50 E~~~l~~l~h~~i--v~~~~~~~~~~~~~~~~~~~~v~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  126 (272)
T cd05075          50 EAVCMKEFDHPNV--MRLIGVCLQTVESEGYPSPVVILPFMK-HGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME  126 (272)
T ss_pred             HHHHHHhCCCCCc--ceEEEEEccCCcccCCCCcEEEEEeCC-CCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHH
Confidence            7888888876653  22221          123479999996 34332222     11  23677888999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|| ..|+||+||||.|||+. ++.++|+|||.|...
T Consensus       127 ~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  162 (272)
T cd05075         127 YLS-SKSFIHRDLAARNCMLNENMNVCVADFGLSKKI  162 (272)
T ss_pred             HHH-HCCeeccccchhheEEcCCCCEEECCCCccccc
Confidence            999 59999999999999995 688999999998754

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.68  E-value=5.5e-16  Score=142.22  Aligned_cols=144  Identities=18%  Similarity=0.194  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||.|.+..+        ++.||||.+......                       .. .......|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~~-----------------------~~-~~~~~~~e   49 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTD--------GKQYVIKKLNLRNAS-----------------------RR-ERKAAEQE   49 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCC--------CcEEEEEEEehhhcC-----------------------HH-HHHHHHHH
Confidence            78999999999999999998666        889999998642110                       00 11123567


Q ss_pred             HHHHHHhhhCCC-Cccccccc--cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL--KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..++++.+.++ .+...+..  ...++||||+. .|.....+..   ..++..++..++.+++.++.+|| ..|+||+|
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~-~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH-~~~i~H~d  127 (257)
T cd08223          50 AQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE-GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH-EKHILHRD  127 (257)
T ss_pred             HHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC-CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccC
Confidence            888888876653 22222221  23579999995 3433333332   34788889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|.|||+. ++.++|+|||.+...
T Consensus       128 i~p~nil~~~~~~~~l~df~~~~~~  152 (257)
T cd08223         128 LKTQNVFLTRTNIIKVGDLGIARVL  152 (257)
T ss_pred             CCchhEEEecCCcEEEecccceEEe
Confidence            999999995 578999999988644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.68  E-value=4.4e-16  Score=144.23  Aligned_cols=149  Identities=18%  Similarity=0.131  Sum_probs=107.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++...||+|++|.||.|.+..+        |..||||.++......                    +.. ....+...
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~--------~~~v~ik~~~~~~~~~--------------------~~~-~~~~~~~~   53 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADT--------GRELAVKQVQFDPESP--------------------ETS-KEVNALEC   53 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCC--------CcEEEEEEeecCcCCc--------------------ccH-HHHHHHHH
Confidence            378899999999999999998666        8999999876421000                    000 11124467


Q ss_pred             HHHHHHHhhhCCCCcccc-ccc---cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKP-ILL---KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~p-i~~---~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..|.++.+.++..... +..   ...++||||+. +|.....+.. ..++...+..++.+++.+|.+|| .+|++|+|
T Consensus        54 E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~d  131 (265)
T cd06652          54 EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMP-GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH-SNMIVHRD  131 (265)
T ss_pred             HHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCC
Confidence            899999998776432111 111   23568999995 3433333333 34677788899999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+|.|||+. ++.++|+|||.+....
T Consensus       132 l~p~nil~~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652         132 IKGANILRDSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             CCHHHEEecCCCCEEECcCccccccc
Confidence            999999995 5889999999886543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.68  E-value=2.9e-16  Score=155.04  Aligned_cols=147  Identities=15%  Similarity=0.084  Sum_probs=101.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+...  + ....+..||||+++.....                         .......+|
T Consensus        40 ~~~~~~LG~G~fg~V~~~~~~~~--~-~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E   91 (374)
T cd05106          40 LQFGKTLGAGAFGKVVEATAFGL--G-KEDNVLRVAVKMLKASAHT-------------------------DEREALMSE   91 (374)
T ss_pred             ceehheecCCCcccEEEEEEecC--C-cccccceeEEEeccCCCCH-------------------------HHHHHHHHH
Confidence            78999999999999999985322  0 0011467999998753110                         011224568


Q ss_pred             HHHHHHh-hhCCCCcccccc----ccceEEEEcccCcccccccccc----------------------------------
Q psy10135        117 MRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK----------------------------------  157 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~----------------------------------  157 (351)
                      +..|..+ .+.+|  +..+.    ....+|||||+. .|.....+.                                  
T Consensus        92 ~~il~~l~~h~nI--v~~~~~~~~~~~~~lv~ey~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (374)
T cd05106          92 LKILSHLGQHKNI--VNLLGACTHGGPVLVITEYCC-YGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIR  168 (374)
T ss_pred             HHHHHhhccCCce--eeEeeEecCCCCeEEeHhhcc-CCcHHHHHHhhhhhhccccccccccccccccccccchhccccc
Confidence            8888888 44442  22222    134689999995 333221111                                  


Q ss_pred             -------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-
Q psy10135        158 -------------------------------------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-  199 (351)
Q Consensus       158 -------------------------------------~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-  199 (351)
                                                           ..+++..++..++.||+.+|.+|| .+|++||||||.|||++ 
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH-~~giiHrDLkp~Nil~~~  247 (374)
T cd05106         169 SDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA-SKNCIHRDVAARNVLLTD  247 (374)
T ss_pred             ccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH-HCCEEeccCchheEEEeC
Confidence                                                 013566778899999999999999 59999999999999995 


Q ss_pred             CCeEEEEEccccccCC
Q psy10135        200 KATLFIIDVAQSVEHD  215 (351)
Q Consensus       200 ~g~l~IIDFG~Av~~~  215 (351)
                      ++.++|+|||.|....
T Consensus       248 ~~~~kL~DfGla~~~~  263 (374)
T cd05106         248 GRVAKICDFGLARDIM  263 (374)
T ss_pred             CCeEEEeeceeeeecc
Confidence            5789999999987543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.68  E-value=4.9e-16  Score=144.77  Aligned_cols=145  Identities=19%  Similarity=0.192  Sum_probs=107.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |..||||+++......                        .......+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~vK~~~~~~~~~------------------------~~~~~~~~e   49 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRET--------GETVALKKVALRRLEG------------------------GIPNQALRE   49 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCC--------CceEEEEEEEcccccc------------------------hhhHHHHHH
Confidence            78899999999999999998556        8999999987532100                        001123567


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..++++.+.++ .+...+. ....++||||+|  +.....+..  ..++..++..++.||+.+|.+|| ..|++|+|||
T Consensus        50 ~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~  126 (286)
T cd07832          50 IKALQACQHPYVVKLLDVFPHGSGFVLVMEYMP--SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH-ANGIMHRDLK  126 (286)
T ss_pred             HHHHHhCCCCCCcceeeEEecCCeeEEEecccC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCcC
Confidence            888888875543 2222111 244579999994  443333322  35788899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |.||++. ++.++|+|||.+.....
T Consensus       127 p~ni~~~~~~~~~l~dfg~~~~~~~  151 (286)
T cd07832         127 PANLLISADGVLKIADFGLARLFSE  151 (286)
T ss_pred             HHHEEEcCCCcEEEeeeeecccccC
Confidence            9999995 58899999999876543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=2.2e-16  Score=156.62  Aligned_cols=139  Identities=14%  Similarity=0.171  Sum_probs=104.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+...||.|+||.||+|.....      ..+..||+|.+....                               ...+
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~------~~~~~v~vK~~~~~~-------------------------------~~~~  135 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGD------EQRKKVIVKAVTGGK-------------------------------TPGR  135 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCC------ccceeEEEEeccccc-------------------------------cHHH
Confidence            499999999999999999975221      116789999875410                               1235


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|.+|.+.+| +....+.. ...++|||+++  +.....+. ...++..++..++.||+.+|.+|| .+||||||||
T Consensus       136 E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH-~~givHrDlk  212 (392)
T PHA03207        136 EIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK--CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLH-GRGIIHRDVK  212 (392)
T ss_pred             HHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCC
Confidence            8889999877653 22112222 34689999995  44444443 245888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       213 p~Nill~~~~~~~l~DfG~a~~~  235 (392)
T PHA03207        213 TENIFLDEPENAVLGDFGAACKL  235 (392)
T ss_pred             HHHEEEcCCCCEEEccCcccccc
Confidence            9999995 589999999998654

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.67  E-value=8.6e-16  Score=141.26  Aligned_cols=144  Identities=12%  Similarity=0.133  Sum_probs=105.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||.|.+..+        ++.+|+|.++.... ..                        .......|
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~--------~~~~~iK~~~~~~~-~~------------------------~~~~~~~e   48 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNS--------DQKYAMKEIRLPKS-SS------------------------AVEDSRKE   48 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCC--------CceEEEEEEEcCcc-hH------------------------HHHHHHHH
Confidence            78899999999999999998666        89999999864210 00                        01123457


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ...+.++.+.++. +...+.. ...++||||+. .|.....+.   ...++...+..++.||+.+|.+|| .+|++|+||
T Consensus        49 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~H~dl  126 (255)
T cd08219          49 AVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD-GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH-EKRVLHRDI  126 (255)
T ss_pred             HHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC-CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCC
Confidence            7888888766642 1112222 44589999995 344333332   234778888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+. ++.++|+|||.+....
T Consensus       127 ~p~nili~~~~~~~l~dfg~~~~~~  151 (255)
T cd08219         127 KSKNIFLTQNGKVKLGDFGSARLLT  151 (255)
T ss_pred             CcceEEECCCCcEEEcccCcceeec
Confidence            99999995 6889999999986553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.67  E-value=4.7e-16  Score=168.66  Aligned_cols=145  Identities=15%  Similarity=0.160  Sum_probs=104.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.....                     +  ...+....+|
T Consensus         4 YeIi~~LGkGgfG~VYlA~d~~t--------g~~VAIK~I~~~l~~---------------------~--e~~~~rflrE   52 (932)
T PRK13184          4 YDIIRLIGKGGMGEVYLAYDPVC--------SRRVALKKIREDLSE---------------------N--PLLKKRFLRE   52 (932)
T ss_pred             eEEEEEEecCCCEEEEEEEECCC--------CcEEEEEEECccccc---------------------C--HHHHHHHHHH
Confidence            88999999999999999998666        899999998752110                     0  0111223468


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc------------CCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD------------TPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~------------~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      +..+.++.+.++. +..... ....++||||+. +|.....+..            ..++...+..++.||+.+|.+|| 
T Consensus        53 i~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~e-GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH-  130 (932)
T PRK13184         53 AKIAADLIHPGIVPVYSICSDGDPVYYTMPYIE-GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH-  130 (932)
T ss_pred             HHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCC-CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH-
Confidence            8999999876632 211111 234589999995 3332222211            12444567889999999999999 


Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..|||||||||.|||++ ++.++|+|||.|...
T Consensus       131 s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        131 SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             HCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence            59999999999999995 589999999999754

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.67  E-value=2.8e-16  Score=145.45  Aligned_cols=145  Identities=21%  Similarity=0.231  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|....+        |..||||++..+.....                       ........|
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~--------~~~~~ik~~~~~~~~~~-----------------------~~~~~~~~e   51 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEKET--------NKEYAIKILDKRQLIKE-----------------------KKVKYVKIE   51 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEcCC--------CCEEEEEEechHhccch-----------------------HHHHHHHHH
Confidence            78899999999999999998666        99999999875321000                       011233457


Q ss_pred             HHHHHHhh-hCCCCcccccc----ccceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMY-SEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~-~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ...+.++. +.++  +..+.    ....++||||+. +|.....+... .++...+..++.|++.+|.+|| .+|++|+|
T Consensus        52 ~~~~~~l~~~~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh-~~~~~H~d  127 (280)
T cd05581          52 KEVLTRLNGHPGI--IKLYYTFQDEENLYFVLEYAP-NGELLQYIRKYGSLDEKCTRFYAAEILLALEYLH-SKGIIHRD  127 (280)
T ss_pred             HHHHHhcccCCCc--hhHHHHhcCCceEEEEEcCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecC
Confidence            77777776 5443  22222    245689999994 34333334333 5888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |+|.||++. ++.++|+|||.+.....
T Consensus       128 l~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581         128 LKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             CCHHHeEECCCCCEEecCCccccccCC
Confidence            999999995 58999999999876543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.67  E-value=4.8e-16  Score=145.32  Aligned_cols=144  Identities=19%  Similarity=0.199  Sum_probs=107.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +|.+.+.||.|+||.||+|.+..+        +..+|||++......                        ... .....
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~--------~~~~aiK~~~~~~~~------------------------~~~-~~~~~   51 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRT--------QKVVAIKIIDLEEAE------------------------DEI-EDIQQ   51 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCC--------CcEEEEEEeccccch------------------------HHH-HHHHH
Confidence            577889999999999999988556        899999987542100                        001 12346


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..+.++.+.++ ++...+. ....++||||++ +|.....+....++...+..++.+++.++.+|| ..|++|+||+|
T Consensus        52 e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl~p  129 (277)
T cd06641          52 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG-GGSALDLLEPGPLDETQIATILREILKGLDYLH-SEKKIHRDIKA  129 (277)
T ss_pred             HHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC-CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHc-cCCeecCCCCH
Confidence            7888888876653 2222222 244689999996 444444444556888889999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .||++. ++.++|+|||.+...
T Consensus       130 ~Ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06641         130 ANVLLSEHGEVKLADFGVAGQL  151 (277)
T ss_pred             HhEEECCCCCEEEeecccceec
Confidence            999995 578999999988544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.67  E-value=4.2e-16  Score=145.40  Aligned_cols=144  Identities=19%  Similarity=0.174  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        ++.||||+++......                        .......+|
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~~~--------~~~v~vK~~~~~~~~~------------------------~~~~~~~~e   50 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNKAT--------GEIVAIKKFKESEDDE------------------------DVKKTALRE   50 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeCCC--------CcEEEEehhhhhcccc------------------------cchhHHHHH
Confidence            78999999999999999998666        8999999987532100                        011223568


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|+++.+.++ .+...+.. ...++||||++  +..+..+.  ...++..++..++.+|+.+|.+|| ..|++|+||+
T Consensus        51 ~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dl~  127 (288)
T cd07833          51 VKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE--RTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCH-SHNIIHRDIK  127 (288)
T ss_pred             HHHHHhcCCCCeeehhheEEECCEEEEEEecCC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCC
Confidence            888888876653 22222222 44689999996  33333222  235788889999999999999999 4899999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.||++. ++.++|+|||.+....
T Consensus       128 ~~ni~~~~~~~~kl~d~g~~~~~~  151 (288)
T cd07833         128 PENILVSESGVLKLCDFGFARALR  151 (288)
T ss_pred             HHHeEECCCCCEEEEeeecccccC
Confidence            9999995 6899999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.67  E-value=3.5e-16  Score=146.05  Aligned_cols=145  Identities=19%  Similarity=0.175  Sum_probs=106.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +|.+.+.||+|.+|.||+|.+..+        |..||||+++.....                        .. ......
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~--------~~~vaiK~~~~~~~~------------------------~~-~~~~~~   51 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRT--------KEVVAIKIIDLEEAE------------------------DE-IEDIQQ   51 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCC--------CeEEEEEEeccccch------------------------HH-HHHHHH
Confidence            577778999999999999988556        889999998642110                        00 112356


Q ss_pred             HHHHHHHhhhCCCC-ccccc-cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..+.++.+.++. +...+ .....++||||++ .|.....+....++...+..++.+++.++.+||+ .|++|+||+|
T Consensus        52 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p  129 (277)
T cd06642          52 EITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG-GGSALDLLKPGPLEETYIATILREILKGLDYLHS-ERKIHRDIKA  129 (277)
T ss_pred             HHHHHHcCCCCccHhhhcccccCCceEEEEEccC-CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc-CCeeccCCCh
Confidence            78888888765532 11111 1244689999996 3444344444567888889999999999999995 8999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .||++. ++.++|+|||.+....
T Consensus       130 ~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06642         130 ANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             heEEEeCCCCEEEcccccccccc
Confidence            999995 5889999999986543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.67  E-value=4.9e-16  Score=144.16  Aligned_cols=140  Identities=20%  Similarity=0.153  Sum_probs=100.1

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .||+|+||.||+|.....      ..+..||+|+.+....                         ........+|+..|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~------~~~~~vavk~~~~~~~-------------------------~~~~~~~~~E~~~l~   50 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMR------KKQIDVAIKVLKNENE-------------------------KSVRDEMMREAEIMH   50 (257)
T ss_pred             ccCCCCcccEEEEEEecC------CCceeEEEEEcccccC-------------------------hHHHHHHHHHHHHHH
Confidence            389999999999976321      0156799998865310                         011123456888999


Q ss_pred             HhhhCCC-CccccccccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        122 RMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       122 rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      ++.+.++ +..........++||||++ .|.....+.  ...++...+..++.|++.+|.+|| .+|++|+||||.|||+
T Consensus        51 ~l~h~~ii~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~nil~  128 (257)
T cd05115          51 QLDNPYIVRMIGVCEAEALMLVMEMAS-GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE-GKNFVHRDLAARNVLL  128 (257)
T ss_pred             hcCCCCeEEEEEEEcCCCeEEEEEeCC-CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hcCeeecccchheEEE
Confidence            9876653 2222223345689999996 343333332  235788889999999999999999 5999999999999999


Q ss_pred             e-CCeEEEEEccccccC
Q psy10135        199 H-KATLFIIDVAQSVEH  214 (351)
Q Consensus       199 ~-~g~l~IIDFG~Av~~  214 (351)
                      . ++.++|+|||.+...
T Consensus       129 ~~~~~~kl~dfg~~~~~  145 (257)
T cd05115         129 VNQHYAKISDFGLSKAL  145 (257)
T ss_pred             cCCCcEEeccCCccccc
Confidence            5 578999999998643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.67  E-value=6.2e-16  Score=144.66  Aligned_cols=141  Identities=18%  Similarity=0.092  Sum_probs=104.3

Q ss_pred             eeeecceeeecCceEEEEEEe----CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASP----GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~----~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||+|+||.||.|..    ..+        +..||||.++....                        ..  ..
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~--------~~~v~iK~~~~~~~------------------------~~--~~   50 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNT--------GEVVAVKKLQHSTA------------------------EH--LR   50 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCC--------CcEEEEEEeccCCH------------------------HH--HH
Confidence            377889999999999999974    223        88999999765311                        00  11


Q ss_pred             HHHHHHHHHHHhhhCCCCcccccc------ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPIL------LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~------~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ...+|+..|.++.+.++.  +.+.      ....++||||+. .|.....+..  ..++...+..++.|++.+|.+|| .
T Consensus        51 ~~~~e~~~l~~l~h~~iv--~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH-~  126 (284)
T cd05081          51 DFEREIEILKSLQHDNIV--KYKGVCYSAGRRNLRLVMEYLP-YGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG-S  126 (284)
T ss_pred             HHHHHHHHHHhCCCCCee--EEEEEEccCCCCceEEEEEecC-CCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH-H
Confidence            235688889998776632  2221      124579999995 3433333332  34778888899999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|++|+||||.|||+. +++++|+|||.+...
T Consensus       127 ~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081         127 KRYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             CCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            9999999999999995 688999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.67  E-value=6.9e-16  Score=144.62  Aligned_cols=141  Identities=17%  Similarity=0.184  Sum_probs=103.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        ++.||||++......                         ........|
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~--------~~~~aiK~~~~~~~~-------------------------~~~~~~~~E   49 (279)
T cd06619           3 IQYQEILGHGNGGTVYKAYHLLT--------RRILAVKVIPLDITV-------------------------ELQKQIMSE   49 (279)
T ss_pred             chheeeeccCCCeEEEEEEEcCC--------CcEEEEEEEecCCCh-------------------------HHHHHHHHH
Confidence            57788999999999999998666        899999998642100                         001123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +..|.++.+.++. +...+. ....++||||+.  |..+...  ..++...+..++.|++.+|.+|| ..|++|+||||.
T Consensus        50 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~  124 (279)
T cd06619          50 LEILYKCDSPYIIGFYGAFFVENRISICTEFMD--GGSLDVY--RKIPEHVLGRIAVAVVKGLTYLW-SLKILHRDVKPS  124 (279)
T ss_pred             HHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC--CCChHHh--hcCCHHHHHHHHHHHHHHHHHHH-HCCEeeCCCCHH
Confidence            8888888765532 211111 245679999995  3332222  24667778899999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccCC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||+. ++.++|+|||.+....
T Consensus       125 Nill~~~~~~~l~dfg~~~~~~  146 (279)
T cd06619         125 NMLVNTRGQVKLCDFGVSTQLV  146 (279)
T ss_pred             HEEECCCCCEEEeeCCcceecc
Confidence            99994 6899999999986543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.67  E-value=3.2e-16  Score=144.26  Aligned_cols=137  Identities=18%  Similarity=0.172  Sum_probs=102.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||++..  .        ++.||+|+++....                            .....+|
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~--~--------~~~~~iK~~~~~~~----------------------------~~~~~~e   49 (254)
T cd05083           8 LTLGEIIGEGEFGAVLQGEY--T--------GQKVAVKNIKCDVT----------------------------AQAFLEE   49 (254)
T ss_pred             ceeeeeeccCCCCceEeccc--C--------CCceEEEeecCcch----------------------------HHHHHHH
Confidence            88999999999999999864  3        78899999864210                            0112457


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.++.+.++ ++...+.....++||||+. .|.....+..   ..++...+..++.|++.++.+|| ++|++|||||
T Consensus        50 ~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~H~dl~  127 (254)
T cd05083          50 TAVMTKLHHKNLVRLLGVILHNGLYIVMELMS-KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE-SKKLVHRDLA  127 (254)
T ss_pred             HHHHHhCCCCCcCeEEEEEcCCCcEEEEECCC-CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccC
Confidence            888888876653 3333333355689999995 3443333322   23677778889999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.+..
T Consensus       128 p~nili~~~~~~kl~Dfg~~~~  149 (254)
T cd05083         128 ARNILVSEDGVAKVSDFGLARV  149 (254)
T ss_pred             cceEEEcCCCcEEECCCcccee
Confidence            9999995 58899999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.67  E-value=4.8e-16  Score=147.67  Aligned_cols=139  Identities=21%  Similarity=0.195  Sum_probs=98.2

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      +..||.|+||.||+|.....      ..+..||+|.++....                            .....+|+..
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~------~~~~~~a~k~~~~~~~----------------------------~~~~~~E~~~   51 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDG------KDEKEYALKQIEGTGI----------------------------SMSACREIAL   51 (317)
T ss_pred             ceEeccCCCeeEEEEEecCC------CccceEEEEEecCCCC----------------------------cHHHHHHHHH
Confidence            35799999999999986321      1167899998764210                            0113468888


Q ss_pred             HHHhhhCCC-Ccccccc---ccceEEEEcccCccccccccc----------ccCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        120 LTRMYSEGL-NVPKPIL---LKSHVLLMTFIGEDGWPAAKL----------KDTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       120 L~rL~~~gi-~vP~pi~---~~~~vLVMEfig~~G~~~~~L----------~~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |.++.+.++ ++...+.   ....++||||++  +.....+          ....++...+..++.||+.+|.+|| ..|
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH-~~~  128 (317)
T cd07867          52 LRELKHPNVIALQKVFLSHSDRKVWLLFDYAE--HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH-ANW  128 (317)
T ss_pred             HHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC--CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence            998877653 2222221   134579999996  3221111          1124677788899999999999999 599


Q ss_pred             ccccCCCCCceEEe-----CCeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLVH-----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi~-----~g~l~IIDFG~Av~~~  215 (351)
                      +|||||||.|||+.     .+.++|+|||.|....
T Consensus       129 ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07867         129 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence            99999999999992     3689999999997554

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.66  E-value=7.1e-16  Score=142.52  Aligned_cols=150  Identities=17%  Similarity=0.209  Sum_probs=108.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||.|++|.||+|.+..+        +..+|+|.+...........                 ...........|
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~--------~~~~~~k~~~~~~~~~~~~~-----------------~~~~~~~~~~~e   56 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASS--------GELMAVKQVELPSVSASSKD-----------------RKRSMLDALARE   56 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCC--------CcEEEEEEecCCCcccchhH-----------------HHHHHHHHHHHH
Confidence            56778999999999999998555        88999998865322111000                 001112345678


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.++  ++.+.    ....++||||++ .+.....+.. ..++...+..++.|++.+|.+|| .+|+||+||
T Consensus        57 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH-~~~ivH~di  132 (267)
T cd06628          57 IALLKELQHENI--VQYLGSSLDADHLNIFLEYVP-GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH-NRGIIHRDI  132 (267)
T ss_pred             HHHHHhcCCCCe--eeEEEEEEeCCccEEEEEecC-CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHH-hcCcccccC
Confidence            889999977653  22222    245689999995 3333333333 35777888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.|||+. ++.++|+|||.+....
T Consensus       133 ~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628         133 KGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             CHHHEEEcCCCCEEecccCCCcccc
Confidence            99999995 5789999999987654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.66  E-value=7.6e-16  Score=146.95  Aligned_cols=144  Identities=18%  Similarity=0.148  Sum_probs=107.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |..+|+|.++....   .                      ........|
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~~~--------~~~~a~k~~~~~~~---~----------------------~~~~~~~~E   49 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHRPS--------GLIMARKLIHLEIK---P----------------------AIRNQIIRE   49 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEcCC--------CeEEEEEEeccccC---H----------------------HHHHHHHHH
Confidence            78899999999999999998666        88999998864210   0                      112234568


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.++.+.+| +....+. ....+|||||+. +|.....+.. ..++...+..++.|++.+|.+||..+|++|+||||
T Consensus        50 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p  128 (308)
T cd06615          50 LKVLHECNSPYIVGFYGAFYSDGEISICMEHMD-GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKP  128 (308)
T ss_pred             HHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCCh
Confidence            899999976653 2222222 245689999995 3333333332 35778888999999999999999657999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.+...
T Consensus       129 ~nil~~~~~~~~l~dfg~~~~~  150 (308)
T cd06615         129 SNILVNSRGEIKLCDFGVSGQL  150 (308)
T ss_pred             HHEEEecCCcEEEccCCCcccc
Confidence            999995 578999999988654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.66  E-value=7.8e-16  Score=142.24  Aligned_cols=145  Identities=13%  Similarity=0.160  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|....+        |+.||||.++.....                     +  .........|
T Consensus         4 ~~i~~~l~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~---------------------~--~~~~~~~~~e   52 (267)
T cd08228           4 FQIEKKIGRGQFSEVYRATCLLD--------RKPVALKKVQIFEMM---------------------D--AKARQDCVKE   52 (267)
T ss_pred             eeeeeeeccCCCeeEEEEEEeCC--------CCEEEEEEeeccccC---------------------C--HHHHHHHHHH
Confidence            78999999999999999998556        899999987642110                     0  0111223468


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..|+++.+.++. +...+. ....++||||++ .|.....+     ....++...+..++.+++.+|.+|| .+|++|+
T Consensus        53 ~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~  130 (267)
T cd08228          53 IDLLKQLNHPNVIKYLDSFIEDNELNIVLELAD-AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH-SRRVMHR  130 (267)
T ss_pred             HHHHHhCCCcceeeeeeeEEECCeEEEEEEecC-CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh-hCCeeCC
Confidence            8889998776532 221211 245679999995 33322222     1233677788899999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+|.|||+. ++.++|+|||.+...
T Consensus       131 dl~~~nil~~~~~~~~l~d~g~~~~~  156 (267)
T cd08228         131 DIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCCHHHEEEcCCCCEEECccccceec
Confidence            9999999995 678999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.66  E-value=7.2e-16  Score=143.67  Aligned_cols=143  Identities=15%  Similarity=0.051  Sum_probs=99.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||.++.....  .                     ...+  ...|
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~--------~~~vaiK~~~~~~~~--~---------------------~~~~--~~~e   49 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMRHVPT--------GTIMAVKRIRATVNS--Q---------------------EQKR--LLMD   49 (283)
T ss_pred             ceEEEEecccCCeEEEEEEEcCC--------CcEEEEEEEecCCCc--H---------------------HHHH--HHHH
Confidence            67889999999999999998666        999999998753210  0                     0001  1224


Q ss_pred             HHHHHHh-hhCCC-Cccccc-cccceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRM-YSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ...+.+. .+.++ ++...+ .....++||||++  |.....+     ....++...+..++.|++.+|.+||..++++|
T Consensus        50 ~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h  127 (283)
T cd06617          50 LDISMRSVDCPYTVTFYGALFREGDVWICMEVMD--TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIH  127 (283)
T ss_pred             HHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc--ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeec
Confidence            4443333 33332 222211 1245689999994  4322112     12357888899999999999999996459999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||||.|||+. ++.++|+|||.+...
T Consensus       128 ~dlkp~nil~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617         128 RDVKPSNVLINRNGQVKLCDFGISGYL  154 (283)
T ss_pred             CCCCHHHEEECCCCCEEEeeccccccc
Confidence            99999999994 689999999998654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.66  E-value=8.1e-16  Score=141.68  Aligned_cols=139  Identities=15%  Similarity=0.152  Sum_probs=104.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|.+.||.|++|.||+|.. .+        +..+|||.++.....                           ......|
T Consensus         8 ~~i~~~ig~g~~~~v~~~~~-~~--------~~~~~vK~~~~~~~~---------------------------~~~~~~e   51 (261)
T cd05034           8 LKLERKLGAGQFGEVWMGTW-NG--------TTKVAVKTLKPGTMS---------------------------PEAFLQE   51 (261)
T ss_pred             eeeeeeeccCcceEEEEEEE-cC--------CceEEEEEecCCccC---------------------------HHHHHHH
Confidence            78899999999999999987 55        788999998753210                           0012457


Q ss_pred             HHHHHHhhhCCCCcccccc---c-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVPKPIL---L-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~---~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..++++.+.++  ++.+.   . ...++||||+. .|.....+..   ..++...+..++.+++.++.+|| ..|++|+
T Consensus        52 ~~~l~~l~h~~i--~~~~~~~~~~~~~~~v~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh-~~~i~h~  127 (261)
T cd05034          52 AQIMKKLRHDKL--VQLYAVCSEEEPIYIVTEYMS-KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE-SRNYIHR  127 (261)
T ss_pred             HHHHhhCCCCCE--eeeeeeeecCCceEEEEeccC-CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH-hCCcccC
Confidence            888888876553  22222   1 45689999994 3333333322   24778888999999999999999 5999999


Q ss_pred             CCCCCceEE-eCCeEEEEEccccccCC
Q psy10135        190 DLSEYNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      ||||.|||+ .++.++|+|||.+....
T Consensus       128 di~p~nili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034         128 DLAARNILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             CcchheEEEcCCCCEEECccccceecc
Confidence            999999999 46899999999986553

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.66  E-value=7.4e-16  Score=146.23  Aligned_cols=141  Identities=17%  Similarity=0.209  Sum_probs=106.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||+|++|.||+|.+..+        ++.||||.+......                          .......|
T Consensus        22 y~~~~~lg~g~~~~v~~~~~~~~--------~~~v~ik~~~~~~~~--------------------------~~~~~~~e   67 (296)
T cd06654          22 YTRFEKIGQGASGTVYTAMDVAT--------GQEVAIRQMNLQQQP--------------------------KKELIINE   67 (296)
T ss_pred             eeeEEEecCCCCeEEEEEEECCC--------CcEEEEEEEecCCcc--------------------------hHHHHHHH
Confidence            89999999999999999998566        899999988642110                          01123467


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +..++.+.+.++. +...+. ....++||||+. +|.....+....++..++..++.|++.+|.+|| ..|++|+||||.
T Consensus        68 ~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH-~~gi~H~dLkp~  145 (296)
T cd06654          68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA-GGSLTDVVTETCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSD  145 (296)
T ss_pred             HHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC-CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHH
Confidence            7888888666532 111111 245689999995 344444445556788889999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEcccccc
Q psy10135        195 NMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~  213 (351)
                      |||+. ++.++|+|||.+..
T Consensus       146 Nill~~~~~~kl~dfg~~~~  165 (296)
T cd06654         146 NILLGMDGSVKLTDFGFCAQ  165 (296)
T ss_pred             HEEEcCCCCEEECccccchh
Confidence            99995 68899999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.66  E-value=1.1e-15  Score=141.91  Aligned_cols=150  Identities=15%  Similarity=0.125  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|....+        |+.+|||.++.........                .+...........|
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~--------~~~~a~K~~~~~~~~~~~~----------------~~~~~~~~~~~~~e   58 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTT--------GEMMAVKQVELPATIAGRH----------------DSRQKDMVKALRSE   58 (272)
T ss_pred             eeecceecccCceEEEEEeecCC--------Cceeeeeeeechhhhhccc----------------chHHHHHHHHHHHH
Confidence            77889999999999999988556        8999999987532110000                00001111234568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+.++  ++.+..    ...++||||+. +|.....+.. ..++...+..++.|++.+|.+|| ..|++|+||
T Consensus        59 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl  134 (272)
T cd06629          59 IETLKDLDHLNI--VQYLGFETTEEYLSIFLEYVP-GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH-SKGILHRDL  134 (272)
T ss_pred             HHHHHhcCCCCc--ceEEEEeccCCceEEEEecCC-CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh-hCCeeecCC
Confidence            888998876653  233322    45679999995 3433333333 45778888889999999999999 589999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.||++. ++.++|+|||.+...
T Consensus       135 ~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629         135 KADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             ChhhEEEcCCCeEEEeeccccccc
Confidence            99999995 689999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.66  E-value=8.9e-16  Score=143.51  Aligned_cols=139  Identities=17%  Similarity=0.185  Sum_probs=102.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.+|||+++....                           .......|
T Consensus        20 ~~~~~~lg~g~~~~vy~~~~~~~--------~~~~~ik~~~~~~~---------------------------~~~~~~~e   64 (286)
T cd06638          20 WEIIETIGKGTYGKVFKVLNKKN--------GSKAAVKILDPIHD---------------------------IDEEIEAE   64 (286)
T ss_pred             eeeeeeeccCCCcEEEEEEECCC--------CceeEEEeeccccc---------------------------hHHHHHHH
Confidence            78999999999999999998666        89999998764210                           01112457


Q ss_pred             HHHHHHhh-hCCCCccccccc---------cceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMY-SEGLNVPKPILL---------KSHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL~-~~gi~vP~pi~~---------~~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      +..+.++. +.++  +..+..         ...++||||++ +|.....+     ....++...+..++.|++.+|.+||
T Consensus        65 ~~~l~~l~~h~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  141 (286)
T cd06638          65 YNILKALSDHPNV--VKFYGMYYKKDVKNGDQLWLVLELCN-GGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH  141 (286)
T ss_pred             HHHHHHHhcCCCe--eeeeeeeeecccCCCCeEEEEEeecC-CCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH
Confidence            77888884 4443  222221         23589999995 33222111     1234777788899999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|++|+||||.||++. ++.++|+|||.+...
T Consensus       142 -~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  174 (286)
T cd06638         142 -VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQL  174 (286)
T ss_pred             -hCCccccCCCHHhEEECCCCCEEEccCCceeec
Confidence             59999999999999995 578999999998654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG3087|consensus

Probab=99.66  E-value=6.9e-16  Score=138.87  Aligned_cols=143  Identities=25%  Similarity=0.343  Sum_probs=108.3

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCC-hhHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKN-PRKMVRTWAEKEM  117 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n-~r~~vk~~aekE~  117 (351)
                      ..+.|.+|++|.|+++.. .         |+.++||-                   ||..+|.... ..++.+.....|.
T Consensus        11 ~l~likQGAEArv~~~~~-~---------Ge~~iIK~-------------------Rf~K~YRHP~LD~kLtr~Rt~~Ea   61 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-S---------GEAAIIKE-------------------RFSKRYRHPALDQKLTRKRTKQEA   61 (229)
T ss_pred             cceeeeccceeeEeeecc-C---------CceeEEee-------------------cccccccchHHHHHHHHHHHHHHH
Confidence            468999999999999987 3         88999994                   3434443221 2456777788999


Q ss_pred             HHHHHhhhCCCCcccccc--ccceEEEEcccCcccccc--cccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        118 RNLTRMYSEGLNVPKPIL--LKSHVLLMTFIGEDGWPA--AKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~--~~~~vLVMEfig~~G~~~--~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +.|.+++..||++|..|.  ...++|+|||+  +|.+.  ..+.   ...........++..+.+.+..|| ..+|||||
T Consensus        62 r~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~--~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH-~ndiiHGD  138 (229)
T KOG3087|consen   62 RLLAKCRALGIPAPRLIFIDTYGGQIYMEFI--DGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH-DNDIIHGD  138 (229)
T ss_pred             HHHHHHHHhCCCCceEEEEecCCCeEEEEec--cchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh-hCCeeccc
Confidence            999999999999999986  57889999999  56321  1111   111222334689999999999999 69999999


Q ss_pred             CCCCceEEe--CCe--EEEEEcccccc
Q psy10135        191 LSEYNMLVH--KAT--LFIIDVAQSVE  213 (351)
Q Consensus       191 Lkp~NILi~--~g~--l~IIDFG~Av~  213 (351)
                      |...|||+.  +++  +.+||||++.-
T Consensus       139 LTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  139 LTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ccccceEEecCCCcCceEEEeecchhc
Confidence            999999994  333  59999999853

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.66  E-value=7.3e-16  Score=144.71  Aligned_cols=144  Identities=18%  Similarity=0.158  Sum_probs=104.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |+.||||+++....   . ..                    ......+|
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~~~--------~~~v~lK~~~~~~~---~-~~--------------------~~~~~~~E   50 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDKNT--------GKLVALKKTRLEMD---E-EG--------------------IPPTALRE   50 (295)
T ss_pred             ceEeeEecccCCeEEEEEEECCC--------CcEEEEEeehhhcc---c-cC--------------------CchHHHHH
Confidence            78889999999999999998666        89999998765210   0 00                    01123468


Q ss_pred             HHHHHHhhh-CC-CCccccccccc------eEEEEcccCcccccccccc------cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        117 MRNLTRMYS-EG-LNVPKPILLKS------HVLLMTFIGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       117 ~~nL~rL~~-~g-i~vP~pi~~~~------~vLVMEfig~~G~~~~~L~------~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      +..+.++.+ .+ +++........      .++||||++  |.....+.      ...++...+..++.||+.+|.+|| 
T Consensus        51 ~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH-  127 (295)
T cd07837          51 ISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD--SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH-  127 (295)
T ss_pred             HHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccC--cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            888888854 33 22332222222      489999995  43322221      124688889999999999999999 


Q ss_pred             hCCccccCCCCCceEEe--CCeEEEEEccccccCC
Q psy10135        183 KCHLVHADLSEYNMLVH--KATLFIIDVAQSVEHD  215 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~~  215 (351)
                      ..|++|+||+|.|||++  ++.++|+|||.+....
T Consensus       128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~  162 (295)
T cd07837         128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS  162 (295)
T ss_pred             HCCeeecCCChHHEEEecCCCeEEEeecccceecC
Confidence            59999999999999995  5789999999987543

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.66  E-value=6.8e-16  Score=149.98  Aligned_cols=148  Identities=16%  Similarity=0.094  Sum_probs=99.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+...   .....++.||||+++.....                       . . .....+|
T Consensus         9 ~~~~~~lG~G~fg~V~~~~~~~~---~~~~~~~~vavK~~~~~~~~-----------------------~-~-~~~~~~E   60 (343)
T cd05103           9 LKLGKPLGRGAFGQVIEADAFGI---DKTATCRTVAVKMLKEGATH-----------------------S-E-HRALMSE   60 (343)
T ss_pred             hcccccccCCccceEEEEeeccC---CccccceeEEEEEeccCCCh-----------------------H-H-HHHHHHH
Confidence            78999999999999999974210   00012789999998753100                       0 0 1123468


Q ss_pred             HHHHHHhh-hCCC-Ccccccc--ccceEEEEcccCcccccccccc-----------------------------------
Q psy10135        117 MRNLTRMY-SEGL-NVPKPIL--LKSHVLLMTFIGEDGWPAAKLK-----------------------------------  157 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi~--~~~~vLVMEfig~~G~~~~~L~-----------------------------------  157 (351)
                      +..|.++. +.+| ++.....  ....++||||++ .|.....+.                                   
T Consensus        61 ~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~-~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (343)
T cd05103          61 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK-FGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLD  139 (343)
T ss_pred             HHHHHhccCCccHhhhcceeecCCCceEEEEeccC-CCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcc
Confidence            88888883 3332 2111111  124579999996 333211111                                   


Q ss_pred             ---------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeE
Q psy10135        158 ---------------------------------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATL  203 (351)
Q Consensus       158 ---------------------------------~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l  203 (351)
                                                       ...++..++..++.|++.+|.+|| ..|++||||||.|||+. ++.+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dikp~Nil~~~~~~~  218 (343)
T cd05103         140 SITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSENNVV  218 (343)
T ss_pred             ccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCccCeEEEcCCCcE
Confidence                                             012455667789999999999999 59999999999999995 6899


Q ss_pred             EEEEccccccC
Q psy10135        204 FIIDVAQSVEH  214 (351)
Q Consensus       204 ~IIDFG~Av~~  214 (351)
                      +|+|||.+...
T Consensus       219 kl~dfg~~~~~  229 (343)
T cd05103         219 KICDFGLARDI  229 (343)
T ss_pred             EEEeccccccc
Confidence            99999998653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.66  E-value=4.9e-16  Score=142.15  Aligned_cols=146  Identities=14%  Similarity=0.160  Sum_probs=106.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |..+|+|+++.+......                        ......|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~~~~~------------------------~~~~~~e   49 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSD--------GKILVWKEIDYGNMTEKE------------------------KQQLVSE   49 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCC--------CCEEEEEEEecccCCHHH------------------------HHHHHHH
Confidence            78889999999999999998666        899999998653211110                        1122457


Q ss_pred             HHHHHHhhhCCCC-cccccc---ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHH-----h
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL---LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLY-----N  182 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~---~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH-----~  182 (351)
                      +..|+++.+.++. +...+.   ....+++|||++ +|.....+.     ...++...+..++.+|+.+|.+||     .
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~-~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~  128 (265)
T cd08217          50 VNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCE-GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG  128 (265)
T ss_pred             HHHHHhcCCCccceeeeeeecCCCCEEEEEehhcc-CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            8888888776642 111111   123579999995 333322222     235788888999999999999999     4


Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                       .+++|+||+|.||++. ++.++|+|||.+....+
T Consensus       129 -~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~  162 (265)
T cd08217         129 -NTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH  162 (265)
T ss_pred             -CcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence             7899999999999995 58999999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=8.6e-16  Score=141.09  Aligned_cols=142  Identities=20%  Similarity=0.192  Sum_probs=107.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|++|.||+|....+        +..+|+|+++.....                          ......+
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~--------------------------~~~~~~~   49 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKARDIAT--------GELVAIKVIKLEPGD--------------------------DFEIIQQ   49 (262)
T ss_pred             ceEEEEEecCCCceEEEEeEecCC--------CCEEEEEEEEcCchh--------------------------hHHHHHH
Confidence            378899999999999999998556        789999999753210                          0123356


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccc-ccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAK-LKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~-L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..+.++.+.++ +....+. ....+++|||++  |..+.. +..  ..++..++..++.|++.+|.+|| .+|++|+|
T Consensus        50 e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh-~~~i~h~d  126 (262)
T cd06613          50 EISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG--GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH-ETGKIHRD  126 (262)
T ss_pred             HHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-hCCceecC
Confidence            8888999877663 2221221 244679999995  333332 222  46888889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|.||++. ++.++|+|||.+...
T Consensus       127 l~p~ni~i~~~~~~~l~d~g~~~~~  151 (262)
T cd06613         127 IKGANILLTEDGDVKLADFGVSAQL  151 (262)
T ss_pred             CChhhEEECCCCCEEECccccchhh
Confidence            999999995 578999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.66  E-value=9e-16  Score=141.98  Aligned_cols=141  Identities=15%  Similarity=0.134  Sum_probs=104.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|++|.||+|.. ..        +..+|||.++....                           ......+
T Consensus         7 ~~~~~~~lg~g~~~~vy~~~~-~~--------~~~~~iK~~~~~~~---------------------------~~~~~~~   50 (260)
T cd05073           7 SLKLEKKLGAGQFGEVWMATY-NK--------HTKVAVKTMKPGSM---------------------------SVEAFLA   50 (260)
T ss_pred             ceeEEeEecCccceEEEEEEe-cC--------CccEEEEecCCChh---------------------------HHHHHHH
Confidence            378999999999999999986 44        67899998765211                           0112346


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|+++.+.++ ++...+.....+++|||++ .|.....+..   ..++...+..++.+++.+|.+|| .+|++|+||
T Consensus        51 e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH-~~~i~H~dl  128 (260)
T cd05073          51 EANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA-KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-QRNYIHRDL  128 (260)
T ss_pred             HHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC-CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH-hCCcccccc
Confidence            8888888876653 3333333355689999996 3444333322   23566778889999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.||++. ++.++|+|||.+...
T Consensus       129 ~p~ni~i~~~~~~~l~d~~~~~~~  152 (260)
T cd05073         129 RAANILVSASLVCKIADFGLARVI  152 (260)
T ss_pred             CcceEEEcCCCcEEECCCcceeec
Confidence            99999995 578999999988654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.66  E-value=5.9e-16  Score=145.23  Aligned_cols=150  Identities=18%  Similarity=0.101  Sum_probs=105.3

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      .+|.+.+.||+|+||.||.|.....    ....+..||||.++.....                       . . .....
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~va~K~~~~~~~~-----------------------~-~-~~~~~   54 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPE----GDNTGEQVAVKSLKPESGG-----------------------N-H-IADLK   54 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccC----CCCccceEEEEEcCccccH-----------------------H-H-HHHHH
Confidence            3578899999999999999974210    0112788999998753100                       0 0 11245


Q ss_pred             HHHHHHHHhhhCCC-Cccccccc---cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +|+..|+++.+.++ ++......   ...++||||+. +|.....+..  ..++...+..++.+++.+|.+|| ..|++|
T Consensus        55 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH-~~gi~H  132 (284)
T cd05079          55 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP-SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG-SRQYVH  132 (284)
T ss_pred             HHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCeee
Confidence            78889999877653 22221111   33579999994 3333222322  24677888899999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +||||.|||+. ++.++|+|||.+....
T Consensus       133 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079         133 RDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             cccchheEEEcCCCCEEECCCccccccc
Confidence            99999999995 5789999999987554

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.66  E-value=6.5e-16  Score=144.43  Aligned_cols=144  Identities=17%  Similarity=0.167  Sum_probs=107.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||.|++|.||+|.+..+        +..||||+++.....                       . . ......
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~--------~~~vaiK~~~~~~~~-----------------------~-~-~~~~~~   51 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRT--------QQVVAIKIIDLEEAE-----------------------D-E-IEDIQQ   51 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccC--------CEEEEEEEEeccccH-----------------------H-H-HHHHHH
Confidence            477889999999999999998556        889999998742100                       0 0 112345


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..+.++.+.++. ....+. ....+|||||++ +|.....+...+++..++..++.+++.+|.+|| ..|++|+||+|
T Consensus        52 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh-~~~ivH~dl~p  129 (277)
T cd06640          52 EITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG-GGSALDLLRAGPFDEFQIATMLKEILKGLDYLH-SEKKIHRDIKA  129 (277)
T ss_pred             HHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC-CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccCcCCCh
Confidence            77788888765532 111111 245689999996 444444455556888888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .||++. ++.++|+|||.+...
T Consensus       130 ~Nil~~~~~~~~l~dfg~~~~~  151 (277)
T cd06640         130 ANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             hhEEEcCCCCEEEcccccceec
Confidence            999995 578999999998654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.66  E-value=6e-16  Score=143.77  Aligned_cols=146  Identities=16%  Similarity=0.172  Sum_probs=108.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|....+        |+.+|+|+++.+..    ...                    .......|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~--------~~~~~~K~~~~~~~----~~~--------------------~~~~~~~e   48 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKT--------GELVALKKIRMENE----KEG--------------------FPITAIRE   48 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCC--------CeEEEEEEEecccc----ccc--------------------chHHHHHH
Confidence            67889999999999999998555        89999999986420    000                    01123457


Q ss_pred             HHHHHHhhhCCC-Cccccccc---cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..++++.+.++ ++...+..   ...++||||++  +.....+..  ..++...+..++.||+.+|.+|| ..|++|+|
T Consensus        49 ~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH-~~~~~h~d  125 (287)
T cd07840          49 IKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD--HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH-SNGILHRD  125 (287)
T ss_pred             HHHHHhccCCCeeeheeeEecCCCCcEEEEecccc--ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCceecc
Confidence            888888876553 22222222   35689999995  433333322  35788889999999999999999 58999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~p  217 (351)
                      |+|.|||+. ++.++|+|||.+.....+
T Consensus       126 l~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840         126 IKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             CcHHHeEEcCCCCEEEccccceeeccCC
Confidence            999999995 689999999999766544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.66  E-value=8.9e-16  Score=140.52  Aligned_cols=137  Identities=18%  Similarity=0.172  Sum_probs=100.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|++|.||+|.. .+        +..+|+|+++....                         .........|+..+
T Consensus         1 ~~ig~g~~g~vy~~~~-~~--------~~~~a~K~~~~~~~-------------------------~~~~~~~~~e~~~l   46 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KD--------KTPVAVKTCKEDLP-------------------------QELKIKFLSEARIL   46 (250)
T ss_pred             CccCCCCCceEEEEEe-cC--------CcEEEEEecCCcCC-------------------------HHHHHHHHHHHHHH
Confidence            3689999999999986 56        88999998865311                         01112235688889


Q ss_pred             HHhhhCCCCccccc--cccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMYSEGLNVPKPI--LLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~~~gi~vP~pi--~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .++.+.++..+.-+  .....++||||+. .|.....+.  ...++...+..+..+++.+|.+|| ..|++|+||+|.||
T Consensus        47 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~~~H~dl~p~ni  124 (250)
T cd05085          47 KQYDHPNIVKLIGVCTQRQPIYIVMELVP-GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE-SKNCIHRDLAARNC  124 (250)
T ss_pred             HhCCCCCcCeEEEEEecCCccEEEEECCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccChheE
Confidence            88877664322111  1244689999995 343333332  234677888899999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      ++. ++.++|+|||.+..
T Consensus       125 li~~~~~~~l~d~g~~~~  142 (250)
T cd05085         125 LVGENNVLKISDFGMSRQ  142 (250)
T ss_pred             EEcCCCeEEECCCcccee
Confidence            994 58899999998864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.66  E-value=8e-16  Score=140.82  Aligned_cols=145  Identities=19%  Similarity=0.208  Sum_probs=106.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|....+        |..||+|.+........                        .......|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~~~~------------------------~~~~~~~e   49 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKAD--------KRVYAMKQIDLSKMNRR------------------------EREEAIDE   49 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCC--------CcEEEEEEeehhhCCHH------------------------HHHHHHHH
Confidence            67889999999999999998666        89999999865321111                        11123468


Q ss_pred             HHHHHHhhhCCC-Cccccc-cccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|+++.+.++ ++...+ .....++||||+. ++.....+..   ..++...+..++.+++.+|.+|| ..|++|+||
T Consensus        50 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH-~~~i~h~dl  127 (256)
T cd08529          50 ARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAE-NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH-SKKILHRDI  127 (256)
T ss_pred             HHHHHhcCCCCeehheeeeccCCEEEEEEEeCC-CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCC
Confidence            888888877653 222222 1245689999995 2332222322   34777888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.||++. ++.++|+|||.+....
T Consensus       128 ~~~nili~~~~~~~l~df~~~~~~~  152 (256)
T cd08529         128 KSLNLFLDAYDNVKIGDLGVAKLLS  152 (256)
T ss_pred             CcceEEEeCCCCEEEcccccceecc
Confidence            99999995 5889999999886543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.66  E-value=4.5e-16  Score=146.47  Aligned_cols=145  Identities=19%  Similarity=0.190  Sum_probs=107.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||.|++|.||+|.+..+        ++.+|||.++.....    ..       +             .....+|
T Consensus         7 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~----~~-------~-------------~~~~~~e   54 (293)
T cd07843           7 YEKLNRIEEGTYGVVYRARDKKT--------GEIVALKKLKMEKEK----EG-------F-------------PITSLRE   54 (293)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCC--------CcEEEEEEEeecccc----cc-------c-------------hhhHHHH
Confidence            78889999999999999998656        899999998753211    00       0             1112457


Q ss_pred             HHHHHHhhhCCCC-ccccc-cc--cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLN-VPKPI-LL--KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi-~~--~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.++.+.++. +...+ ..  ...+|||||++  +.....+.  ...++..++..++.||+.+|.+|| .+|++|+|
T Consensus        55 ~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~i~H~d  131 (293)
T cd07843          55 INILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE--HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH-DNWILHRD  131 (293)
T ss_pred             HHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC--cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecc
Confidence            8888888766532 11111 12  45689999995  43322222  224788899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |+|.|||+. ++.++|+|||.+.....
T Consensus       132 l~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843         132 LKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             CCHHHEEECCCCcEEEeecCceeeccC
Confidence            999999995 58899999999876544

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.66  E-value=4.1e-16  Score=144.39  Aligned_cols=142  Identities=20%  Similarity=0.174  Sum_probs=105.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        ++.||||+++.....                         . .....+|
T Consensus        11 ~~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~-------------------------~-~~~~~~e   56 (267)
T cd06645          11 FELIQRIGSGTYGDVYKARNVNT--------GELAAIKVIKLEPGE-------------------------D-FAVVQQE   56 (267)
T ss_pred             HHHHHHhCCCCCeEEEEEEEcCC--------CcEEEEEEEecCchh-------------------------H-HHHHHHH
Confidence            77889999999999999998666        899999998753210                         0 0112357


Q ss_pred             HHHHHHhhhCCC-Cccccc-cccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..+..+.+.++ .....+ .....++||||++ +|.....+. ...++..++..++.|++.++.+|| ..|++|+||||
T Consensus        57 ~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp  134 (267)
T cd06645          57 IIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG-GGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLH-SKGKMHRDIKG  134 (267)
T ss_pred             HHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCH
Confidence            777888766553 222211 1245689999996 343333332 345888899999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.+...
T Consensus       135 ~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645         135 ANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             HHEEECCCCCEEECcceeeeEc
Confidence            999995 688999999998644

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.66  E-value=1.1e-15  Score=139.09  Aligned_cols=147  Identities=16%  Similarity=0.196  Sum_probs=108.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.+..+        +..||+|++......                        .........|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~------------------------~~~~~~~~~e   49 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSD--------GKLYVLKEIDLSNMS------------------------EKEREDALNE   49 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCC--------CcEEEEEEeecccCC------------------------hHHHHHHHHH
Confidence            77889999999999999998656        899999998653210                        0112234568


Q ss_pred             HHHHHHhhhCCCCc-ccccc-ccceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNV-PKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi~-~~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ++.+.++.+.++.. ...+. ....++||||++ ++.....+..     ..++...+..++.+++.+|.+|| ..|++|+
T Consensus        50 ~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh-~~~~~H~  127 (258)
T cd08215          50 VKILKKLNHPNIIKYYESFEEKGKLCIVMEYAD-GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH-SRKILHR  127 (258)
T ss_pred             HHHHHhcCCCChhheEEEEecCCEEEEEEEecC-CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH-hCCEecc
Confidence            88888887655321 11111 245679999995 3333333322     45788889999999999999999 5899999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCCCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~~p  217 (351)
                      ||+|.||++. ++.++|+|||.+....++
T Consensus       128 dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215         128 DIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCChHHeEEcCCCcEEECCccceeecccC
Confidence            9999999996 589999999999766554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.66  E-value=9e-16  Score=141.35  Aligned_cols=146  Identities=13%  Similarity=0.117  Sum_probs=106.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|++|.||+|....+        |+.||+|.++.......                       .......+
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~~-----------------------~~~~~~~~   51 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLD--------GRVVALKKVQIFEMMDA-----------------------KARQDCLK   51 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCC--------CCEEEEEEeecccccch-----------------------hhHHHHHH
Confidence            388999999999999999998656        99999999875211000                       01122346


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|.++.+.++. ....+. ....++||||++ +|.....+.     ...++..++..++.+++.+|.+|| ..|++|
T Consensus        52 ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h  129 (267)
T cd08224          52 EIDLLKQLDHPNVIKYLASFIENNELNIVLELAD-AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH-SKRIMH  129 (267)
T ss_pred             HHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCC-CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH-hCCEec
Confidence            88888888766532 221221 234579999995 333322232     234777888999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||+|.||++. ++.++|+|||.+...
T Consensus       130 ~dl~p~nil~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224         130 RDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCcChhhEEECCCCcEEEeccceeeec
Confidence            99999999994 688999999988643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.66  E-value=5.5e-16  Score=143.65  Aligned_cols=142  Identities=19%  Similarity=0.249  Sum_probs=103.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +|++...||+|++|.||+|....+        ++.||||++.....   .                        ......
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~--------~~~~aik~~~~~~~---~------------------------~~~~~~   51 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHVKT--------GQLAAIKVMDVTGD---E------------------------EEEIKQ   51 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEcCC--------CcEEEEEEEEcCCc---c------------------------HHHHHH
Confidence            578889999999999999998666        89999999865210   0                        011234


Q ss_pred             HHHHHHHh-hhCCC-Ccccccc-------ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRM-YSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL-~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |...|.++ .+.++ +....+.       ....++||||++ .|.....+..   ..++...+..++.|++.+|.+||. 
T Consensus        52 e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~-~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~-  129 (272)
T cd06637          52 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG-AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ-  129 (272)
T ss_pred             HHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCC-CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence            67777777 34432 2222111       123579999996 4444333332   247778888999999999999994 


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||||+||||.||+++ ++.++|+|||.|...
T Consensus       130 ~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637         130 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             CCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            8999999999999995 578999999998754

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.66  E-value=7.4e-16  Score=145.16  Aligned_cols=147  Identities=19%  Similarity=0.185  Sum_probs=107.4

Q ss_pred             HhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHH
Q psy10135         31 ISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVR  110 (351)
Q Consensus        31 ~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk  110 (351)
                      +..+-.|++.+.||.|++|.||+|.+..+        +..+|+|++.....                        ... +
T Consensus         8 ~~~~~~y~i~~~lg~g~~g~vy~~~~~~~--------~~~~~~k~~~~~~~------------------------~~~-~   54 (292)
T cd06644           8 LDPNEVWEIIGELGDGAFGKVYKAKNKET--------GALAAAKVIETKSE------------------------EEL-E   54 (292)
T ss_pred             cCcchhhhhhheecCCCCeEEEEEEECCC--------CceEEEEEeccCCH------------------------HHH-H
Confidence            33344699999999999999999998666        89999999875311                        000 1


Q ss_pred             HHHHHHHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        111 TWAEKEMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       111 ~~aekE~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                       ....|+..+..+.+.++. +...+. ....++||||++ .|.....+.  ...++...+..+..|++.++.+|| ..|+
T Consensus        55 -~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i  131 (292)
T cd06644          55 -DYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP-GGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH-SMKI  131 (292)
T ss_pred             -HHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC-CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh-cCCe
Confidence             123477788888766532 222111 245689999995 332222222  245788899999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      +|+||||.|||+. ++.++|+|||.+..
T Consensus       132 ~H~dlkp~Nili~~~~~~kl~dfg~~~~  159 (292)
T cd06644         132 IHRDLKAGNVLLTLDGDIKLADFGVSAK  159 (292)
T ss_pred             eecCCCcceEEEcCCCCEEEccCcccee
Confidence            9999999999995 68899999998754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.66  E-value=5.4e-16  Score=143.29  Aligned_cols=145  Identities=16%  Similarity=0.167  Sum_probs=101.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+++.||.|+||.||.|....+     .+.+..||||+++......                      ..+  .....|
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~-----~~~~~~vaiK~~~~~~~~~----------------------~~~--~~~~~e   51 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQD-----DGSQLKVAVKTMKLDIHTY----------------------SEI--EEFLSE   51 (273)
T ss_pred             CccccccCcCCCceEEEEEEecC-----CCCcceEEEEEeccCcCCH----------------------HHH--HHHHHH
Confidence            56889999999999999986332     0114789999987521100                      111  123467


Q ss_pred             HHHHHHhhhCCCCccccccc----------cceEEEEcccCcccccccccc-------cCCCCHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAAKLK-------DTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~~L~-------~~~l~~~~~~~l~~qll~~L~~  179 (351)
                      ...|+.+.+.++  .+.+..          ...++||||+. .|.....+.       ...++...+..++.|++.+|.+
T Consensus        52 ~~~l~~l~h~~i--v~~~~~~~~~~~~~~~~~~~~v~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~  128 (273)
T cd05035          52 AACMKDFDHPNV--MKLIGVCFEASSLQKIPKPMVILPFMK-HGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEY  128 (273)
T ss_pred             HHHHHhCCCCCe--eeEEeeeccCCccccCcccEEEEeccC-CCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHH
Confidence            788888876653  222211          12479999995 333222221       1247778889999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      || ..|++|+||||.|||+. ++.++|+|||.|...
T Consensus       129 lH-~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  163 (273)
T cd05035         129 LS-NRNFIHRDLAARNCMLREDMTVCVADFGLSKKI  163 (273)
T ss_pred             HH-hCCeeccccchheEEECCCCeEEECCccceeec
Confidence            99 59999999999999995 579999999998654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.66  E-value=9.2e-16  Score=141.39  Aligned_cols=140  Identities=15%  Similarity=0.112  Sum_probs=103.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.. .+        +..+|+|.++.....                           .....+|
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~-~~--------~~~~a~K~~~~~~~~---------------------------~~~~~~e   49 (256)
T cd05114           6 LTFMKELGSGQFGVVHLGKW-RA--------QIKVAIKAINEGAMS---------------------------EEDFIEE   49 (256)
T ss_pred             cEEeeEecCCcCceEEEEEe-cc--------CceEEEEecccCCcc---------------------------HHHHHHH
Confidence            67889999999999999987 55        678999987642110                           0112458


Q ss_pred             HHHHHHhhhCCCCc-ccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLNV-PKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|+++.+.++.. ...+. ....++||||+. +|.....+..  ..++...+..++.+++.+|.+|| ..|++|+||+
T Consensus        50 ~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~  127 (256)
T cd05114          50 AKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME-NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE-RNSFIHRDLA  127 (256)
T ss_pred             HHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC-CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH-HCCccccccC
Confidence            88999987766421 11111 134589999995 4444433332  34777888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.||++. ++.++|+|||.+...
T Consensus       128 p~ni~i~~~~~~kl~d~g~~~~~  150 (256)
T cd05114         128 ARNCLVSSTGVVKVSDFGMTRYV  150 (256)
T ss_pred             cceEEEcCCCeEEECCCCCcccc
Confidence            9999995 578999999988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.66  E-value=8.7e-16  Score=143.80  Aligned_cols=146  Identities=19%  Similarity=0.106  Sum_probs=104.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||++.....    ....+..||+|+++.....                         ........|
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~E   56 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPA----NDGTGEMVAVKTLKRECGQ-------------------------QNTSGWKKE   56 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccc----cCCCCceEEEEEeccccCh-------------------------HHHHHHHHH
Confidence            57889999999999988653110    0112789999998752100                         001122458


Q ss_pred             HHHHHHhhhCCCCccccccc------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.++.+.++.  ..+..      ...++||||+. .|.....+....++..++..++.|++.+|.+|| ..|++|+|
T Consensus        57 ~~~l~~l~h~~i~--~~~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH-~~~i~H~d  132 (283)
T cd05080          57 INILKTLYHENIV--KYKGCCSEQGGKGLQLIMEYVP-LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLH-SQHYIHRD  132 (283)
T ss_pred             HHHHHhCCCCCEe--eEEEEEecCCCceEEEEecCCC-CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HCCeeccc
Confidence            8899999776532  22221      23579999995 344333444556888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.+....
T Consensus       133 lkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080         133 LAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             cChheEEEcCCCcEEEeecccccccC
Confidence            999999995 5789999999987543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.66  E-value=6.7e-16  Score=145.57  Aligned_cols=143  Identities=20%  Similarity=0.182  Sum_probs=105.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.+..+        |+.+|||++.....  ++  .                    ......+|
T Consensus        10 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~--~~--~--------------------~~~~~~~e   57 (311)
T cd07866          10 YEILGKLGEGTFGEVYKARQIKT--------GRVVALKKILMHNE--KD--G--------------------FPITALRE   57 (311)
T ss_pred             EEEEEEeccCCCEEEEEEEECCC--------CcEEEEEEEEeccC--CC--C--------------------cchhHHHH
Confidence            89999999999999999998666        89999998865211  00  0                    00112468


Q ss_pred             HHHHHHhhhCCCC-ccccccc---------cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL---------KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~---------~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +..|+++.+.++. +...+..         ...++||+|++  +.....+.  ...++...+..++.||+.+|.+|| ..
T Consensus        58 ~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~--~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH-~~  134 (311)
T cd07866          58 IKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD--HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLH-EN  134 (311)
T ss_pred             HHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC--cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH-hC
Confidence            8888888776542 2111111         12479999995  33333232  235888899999999999999999 59


Q ss_pred             CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |++|+||||.|||+. ++.++|+|||.+...
T Consensus       135 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866         135 HILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             CeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence            999999999999995 689999999998654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.66  E-value=7.1e-16  Score=145.96  Aligned_cols=146  Identities=25%  Similarity=0.259  Sum_probs=105.5

Q ss_pred             eeecceeeecCceEEEEEEeCC--CcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGA--NYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~--~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |.+.++||+|++|.||+|.+..  +        |..||||+++.....   ...+.                    ....
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~--------~~~~alK~~~~~~~~---~~~~~--------------------~~~~   50 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKD--------GKEYAIKKFKGDKEQ---YTGIS--------------------QSAC   50 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCC--------CCeEEEEEecccccc---ccCcc--------------------HHHH
Confidence            7888999999999999999855  4        899999998863210   00000                    1123


Q ss_pred             HHHHHHHHhhhCCC-Cccccccc---cceEEEEcccCcccccccccc------cCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~------~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      .|+..+.++.+.++ +....+..   ...+|||||++  +.....+.      ...++...+..++.||+.+|.+|| ..
T Consensus        51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~  127 (316)
T cd07842          51 REIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE--HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH-SN  127 (316)
T ss_pred             HHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC--cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH-hC
Confidence            57788888876653 22222221   34689999995  33322221      125778888999999999999999 58


Q ss_pred             CccccCCCCCceEEe-----CCeEEEEEccccccCCC
Q psy10135        185 HLVHADLSEYNMLVH-----KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       185 glVH~DLkp~NILi~-----~g~l~IIDFG~Av~~~~  216 (351)
                      |++|+||||.|||+.     ++.++|+|||.+.....
T Consensus       128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~  164 (316)
T cd07842         128 WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA  164 (316)
T ss_pred             CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence            999999999999994     57899999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.65  E-value=9.2e-16  Score=143.16  Aligned_cols=143  Identities=22%  Similarity=0.193  Sum_probs=105.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |+.||||++......                        .........|
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~--------~~~~~iK~~~~~~~~------------------------~~~~~~~~~e   50 (286)
T cd07846           3 YENLGLVGEGSYGMVMKCKHKET--------GQIVAIKKFLESEDD------------------------KMVKKIAMRE   50 (286)
T ss_pred             eeEeeeeccCCCeEEEEEEECCC--------CCEEEEEeHhhccCc------------------------chhhHHHHHH
Confidence            78899999999999999998556        899999987642110                        0111123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++.+.++. +...+. ....++||||+.  |..+..+.  ...++..++..++.|++.+|.+|| ..|++|+||+
T Consensus        51 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~h~~l~  127 (286)
T cd07846          51 IRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVD--HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCH-SHNIIHRDIK  127 (286)
T ss_pred             HHHHHhcCCcchhhHHHhcccCCeEEEEEecCC--ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCC
Confidence            7888888766532 222221 134689999995  44433332  234788889999999999999999 5899999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.||++. ++.++|+|||.+...
T Consensus       128 p~ni~~~~~~~~~l~dfg~~~~~  150 (286)
T cd07846         128 PENILVSQSGVVKLCDFGFARTL  150 (286)
T ss_pred             HHHEEECCCCcEEEEeeeeeeec
Confidence            9999994 688999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.65  E-value=9.2e-16  Score=141.54  Aligned_cols=142  Identities=14%  Similarity=0.104  Sum_probs=104.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|++|.||+|.. .+        +..||+|.++.....                           ......
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~-~~--------~~~v~iK~~~~~~~~---------------------------~~~~~~   50 (261)
T cd05072           7 SIKLVKKLGAGQFGEVWMGYY-NN--------STKVAVKTLKPGTMS---------------------------VQAFLE   50 (261)
T ss_pred             HeEEeeecCCcCCceEEEEEe-cC--------CceEEEEEccCCchh---------------------------HHHHHH
Confidence            378999999999999999987 55        778999987652110                           011245


Q ss_pred             HHHHHHHhhhCCCCccc-ccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPK-PIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~-pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |...++++.+.++.... .+. ....++||||+. +|.....+..   ..++......+..+++.+|.+|| ..|++|+|
T Consensus        51 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH-~~~i~H~d  128 (261)
T cd05072          51 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA-KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE-RKNYIHRD  128 (261)
T ss_pred             HHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC-CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccc
Confidence            78888888766542211 111 244579999995 3444333322   34677778889999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       129 l~p~nili~~~~~~~l~dfg~~~~~~  154 (261)
T cd05072         129 LRAANVLVSESLMCKIADFGLARVIE  154 (261)
T ss_pred             cchhhEEecCCCcEEECCCccceecC
Confidence            999999995 5789999999997543

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.65  E-value=1e-15  Score=145.79  Aligned_cols=140  Identities=19%  Similarity=0.120  Sum_probs=99.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcE--EEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKE--FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~--vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |++.+.||.|+||.||+|.+..+        |..  +|+|.++....                         ........
T Consensus         9 ~~~~~~lg~G~~g~V~~a~~~~~--------~~~~~~~ik~~~~~~~-------------------------~~~~~~~~   55 (303)
T cd05088           9 IKFQDVIGEGNFGQVLKARIKKD--------GLRMDAAIKRMKEYAS-------------------------KDDHRDFA   55 (303)
T ss_pred             ceeeeeecCCCCceEEEEEEccC--------CceeeEEEEEecccCC-------------------------HHHHHHHH
Confidence            78889999999999999987544        554  56666543110                         01111234


Q ss_pred             HHHHHHHHh-hhCCCCcccccc----ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHH
Q psy10135        115 KEMRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRE  172 (351)
Q Consensus       115 kE~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~q  172 (351)
                      +|+..|.++ .+.+|  ++.+.    ....++||||+. +|.....+..                 ..++...+..++.|
T Consensus        56 ~Ei~~l~~l~~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  132 (303)
T cd05088          56 GELEVLCKLGHHPNI--INLLGACEHRGYLYLAIEYAP-HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD  132 (303)
T ss_pred             HHHHHHHHhcCCCCc--ceEEEEECCCCCceEEEEeCC-CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHH
Confidence            588888888 55443  23222    245689999995 3433332221                 13677788999999


Q ss_pred             HHHHHHHHHhhCCccccCCCCCceEE-eCCeEEEEEcccccc
Q psy10135        173 CVVMMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       173 ll~~L~~LH~~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~  213 (351)
                      |+.++.+|| .+|++||||||.|||+ .++.++|+|||.+..
T Consensus       133 i~~al~~LH-~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~  173 (303)
T cd05088         133 VARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSRG  173 (303)
T ss_pred             HHHHHHHHH-hCCccccccchheEEecCCCcEEeCccccCcc
Confidence            999999999 5999999999999999 468999999999853

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.65  E-value=8.4e-16  Score=143.30  Aligned_cols=140  Identities=13%  Similarity=0.115  Sum_probs=105.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||.|++|.||+|.+..+        |..||||+++.....                         ........|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~-------------------------~~~~~~~~E   48 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTT--------GEIVALKEIHLDAEE-------------------------GTPSTAIRE   48 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCC--------CeEEEEEEecccccc-------------------------cchHHHHHH
Confidence            78899999999999999998666        899999998753110                         001123458


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..++++.+.++  ++.+..    ...+|||||++  |.....+..    ..++...+..++.|++.+|.+|| ..|++|
T Consensus        49 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~h  123 (284)
T cd07836          49 ISLMKELKHENI--VRLHDVIHTENKLMLVFEYMD--KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH-ENRVLH  123 (284)
T ss_pred             HHHHHhhcCCCE--eeeeeeEeeCCcEEEEEecCC--ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH-HCCeee
Confidence            889999876653  333322    44689999995  433332222    34788889999999999999999 589999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||+|.||++. ++.++|+|||.+...
T Consensus       124 ~dl~p~ni~~~~~~~~~l~d~g~~~~~  150 (284)
T cd07836         124 RDLKPQNLLINKRGELKLADFGLARAF  150 (284)
T ss_pred             CCCCHHHEEECCCCcEEEeecchhhhh
Confidence            99999999995 589999999998644

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1e-15  Score=145.83  Aligned_cols=144  Identities=19%  Similarity=0.166  Sum_probs=106.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|....+        ++.||||.+........                       ........|
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~~~~~~~~e   51 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLKGT--------GKLFALKVLDKKEMIKR-----------------------NKVKRVLTE   51 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEcCC--------CcEEEEEEEeccccchH-----------------------HHHHHHHHH
Confidence            78889999999999999998556        89999999875321000                       001123567


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..|.++.+.+|  +..+..    ...++||||+. +|.....+..   ..++...+..++.|++.+|.+|| ..|++|+
T Consensus        52 ~~~l~~l~~~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~  127 (316)
T cd05574          52 QEILATLDHPFL--PTLYASFQTETYLCLVMDYCP-GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH-LLGIVYR  127 (316)
T ss_pred             HHHHHhCCCCCc--hhheeeeecCCEEEEEEEecC-CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH-HCCeecc
Confidence            888888876653  233322    34589999994 3333222322   35788888889999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||.|||+. ++.++|+|||.+....
T Consensus       128 dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574         128 DLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             CCChHHeEEcCCCCEEEeecchhhccc
Confidence            9999999995 6899999999986543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.65  E-value=5.8e-16  Score=142.62  Aligned_cols=145  Identities=19%  Similarity=0.155  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        +..||||++.......                      ....+ ....|
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~----------------------~~~~~-~~~~e   50 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDT--------KKMFAMKYMNKQKCVE----------------------KGSVR-NVLNE   50 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccC--------CcEEEEEEEehhhhcc----------------------hhHHH-HHHHH
Confidence            78999999999999999998656        8999999987521100                      00111 23457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..+.++.+.++. +...+. ....++||||+. ++.....+.. ..++...+..++.+|+.+|.+|| .+|++|+||+|
T Consensus        51 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~~  128 (258)
T cd05578          51 RRILQELNHPFLVNLWYSFQDEENMYLVVDLLL-GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLH-SKGIIHRDIKP  128 (258)
T ss_pred             HHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCC-CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCH
Confidence            8888888766532 111111 234689999995 2333233333 36888889999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .||++. ++.++|+|||.+...
T Consensus       129 ~nil~~~~~~~~l~d~~~~~~~  150 (258)
T cd05578         129 DNILLDEQGHVHITDFNIATKV  150 (258)
T ss_pred             HHeEEcCCCCEEEeeccccccc
Confidence            999995 689999999988654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.65  E-value=9e-16  Score=143.32  Aligned_cols=144  Identities=14%  Similarity=0.097  Sum_probs=105.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||.|++|.||+|.+..+        |..||||.++.....  .                      ........|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~--~----------------------~~~~~~~~E   49 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLT--------GEVVALKKIRLDTET--E----------------------GVPSTAIRE   49 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCC--------CCEEEEEEccccccc--c----------------------ccchHHHHH
Confidence            78889999999999999998666        899999988642110  0                      011224568


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+.++ ++...+. ....++||||++  +.....+.   ...++...+..++.|++.+|.+|| ..|++|+||
T Consensus        50 ~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~--~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh-~~~i~H~~l  126 (284)
T cd07860          50 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH-SHRVLHRDL  126 (284)
T ss_pred             HHHHHhcCCCCCcchhhhcccCCcEEEEeeccc--cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCC
Confidence            889999976653 2222221 244579999994  33222222   235778888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.||++. ++.++|+|||.+....
T Consensus       127 ~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860         127 KPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             CHHHEEECCCCCEEEeeccchhhcc
Confidence            99999994 6889999999886543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.65  E-value=1.1e-15  Score=143.24  Aligned_cols=145  Identities=16%  Similarity=0.126  Sum_probs=101.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +++.+.||.|+||.||+|.....    ....+..+|||..+....                       ..  ......+|
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~----~~~~~~~~~ik~~~~~~~-----------------------~~--~~~~~~~E   57 (283)
T cd05090           7 VRFMEELGECAFGKIYKGHLYLP----GMDHAQLVAIKTLKDINN-----------------------PQ--QWGEFQQE   57 (283)
T ss_pred             ceeeeeccccCCcceEEEEEecC----CCCCcceEEEEeccCCCC-----------------------HH--HHHHHHHH
Confidence            67889999999999999974211    001167899998764210                       00  01123568


Q ss_pred             HHHHHHhhhCCCCcccccc---c-cceEEEEcccCcccccccccc------------------cCCCCHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPIL---L-KSHVLLMTFIGEDGWPAAKLK------------------DTPLTESGACKLYRECV  174 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~---~-~~~vLVMEfig~~G~~~~~L~------------------~~~l~~~~~~~l~~qll  174 (351)
                      +..|+++.+.++  ++.+.   . ...++||||++ .|.....+.                  ...++..++..+..+++
T Consensus        58 ~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~  134 (283)
T cd05090          58 ASLMAELHHPNI--VCLLGVVTQEQPVCMLFEYLN-QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIA  134 (283)
T ss_pred             HHHHhhCCCCCe--eeEEEEEecCCceEEEEEcCC-CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHH
Confidence            889999976653  22332   1 44589999995 333222221                  11356677888999999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .+|.+|| .+|++|+||||.|||+. ++.++|+|||.+...
T Consensus       135 ~al~~lH-~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  174 (283)
T cd05090         135 AGMEYLS-SHFFVHKDLAARNILIGEQLHVKISDLGLSREI  174 (283)
T ss_pred             HHHHHHH-hcCeehhccccceEEEcCCCcEEeccccccccc
Confidence            9999999 59999999999999995 578999999999654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.65  E-value=2.3e-15  Score=143.07  Aligned_cols=152  Identities=18%  Similarity=0.222  Sum_probs=111.1

Q ss_pred             HHHHHhcCc---eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCC
Q psy10135         27 LFKLISRGM---VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKK  103 (351)
Q Consensus        27 L~~l~~~g~---~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~  103 (351)
                      +..+..-|.   -|++.+.||.|.+|.||+|.+..+        |+.||||.+......                     
T Consensus         8 ~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~--------~~~v~iK~~~~~~~~---------------------   58 (296)
T cd06655           8 LRTIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVAT--------GQEVAIKQINLQKQP---------------------   58 (296)
T ss_pred             HHHHHhcCCCcceEEEEEEEecCCCeEEEEEEEcCC--------CcEEEEEEEecccCc---------------------
Confidence            344444443   499999999999999999998666        899999987542100                     


Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhCCCCc-ccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        104 NPRKMVRTWAEKEMRNLTRMYSEGLNV-PKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       104 n~r~~vk~~aekE~~nL~rL~~~gi~v-P~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                          . ......|+..+..+.+.++.. ...+. ....++||||+. +|.....+....++..++..++.+++.++.+||
T Consensus        59 ----~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH  132 (296)
T cd06655          59 ----K-KELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA-GGSLTDVVTETCMDEAQIAAVCRECLQALEFLH  132 (296)
T ss_pred             ----h-HHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC-CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                0 112345788888887665321 11111 244679999995 343333344456888899999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|++|+||+|.||++. ++.++|+|||.+...
T Consensus       133 -~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~  165 (296)
T cd06655         133 -ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQI  165 (296)
T ss_pred             -HCCcccCCCCHHHEEECCCCCEEEccCccchhc
Confidence             59999999999999995 689999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.4e-15  Score=142.22  Aligned_cols=148  Identities=16%  Similarity=0.084  Sum_probs=105.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|....+    .......+|+|..+....                         ........+
T Consensus         8 ~~~~~~~ig~g~~g~v~~~~~~~~----~~~~~~~~aik~~~~~~~-------------------------~~~~~~~~~   58 (279)
T cd05057           8 ELEKIKVLGSGAFGTVYKGVWIPE----GEKVKIPVAIKVLREETS-------------------------PKANKEILD   58 (279)
T ss_pred             HcEEcceecCCCCccEEEEEEecC----CCCcceEEEEEeccCCCC-------------------------HHHHHHHHH
Confidence            378889999999999999987433    000123689998765321                         011122356


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.++.+.++ +..........++||||+. .|.....+..  ..++...+..++.|++.+|.+|| .+|++|+|||
T Consensus        59 e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~i~H~di~  136 (279)
T cd05057          59 EAYVMASVDHPHVVRLLGICLSSQVQLITQLMP-LGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE-EKRLVHRDLA  136 (279)
T ss_pred             HHHHHHhCCCCCcceEEEEEecCceEEEEecCC-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCEEecccC
Confidence            8888888866553 2221122256689999996 4544444433  34788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ ++.++|+|||.+...
T Consensus       137 p~nil~~~~~~~kL~dfg~~~~~  159 (279)
T cd05057         137 ARNVLVKTPQHVKITDFGLAKLL  159 (279)
T ss_pred             cceEEEcCCCeEEECCCcccccc
Confidence            9999995 588999999998654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=6.4e-16  Score=144.28  Aligned_cols=142  Identities=18%  Similarity=0.181  Sum_probs=105.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||.|++|.||+|....+        +..+|+|+++.....                        ..  .....|
T Consensus         7 ~~i~~~l~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~------------------------~~--~~~~~e   52 (280)
T cd06611           7 WEIIGELGDGAFGKVYKAQHKET--------GLFAAAKIIQIESEE------------------------EL--EDFMVE   52 (280)
T ss_pred             HHHHHHhcCCCCceEEEEEEcCC--------CcEEEEEEEeeCCHH------------------------HH--HHHHHH
Confidence            88899999999999999998556        899999998753110                        00  112357


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.++ .+...+. ....++||||++ .|.....+..  ..++...+..++.|++.+|.+|| ..|++|+||+
T Consensus        53 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh-~~~i~h~dl~  130 (280)
T cd06611          53 IDILSECKHPNIVGLYEAYFYENKLWILIEFCD-GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH-SHKVIHRDLK  130 (280)
T ss_pred             HHHHHhCCCCceeEEEEEEecCCeEEEEeeccC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCC
Confidence            888888876552 2222222 244589999995 3333222322  35888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.||++. ++.++|+|||.+...
T Consensus       131 p~nili~~~~~~~l~d~g~~~~~  153 (280)
T cd06611         131 AGNILLTLDGDVKLADFGVSAKN  153 (280)
T ss_pred             hhhEEECCCCCEEEccCccchhh
Confidence            9999995 689999999987544

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.65  E-value=1.3e-15  Score=141.10  Aligned_cols=142  Identities=16%  Similarity=0.111  Sum_probs=104.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.....        +..||+|+++.....                           .....+|
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~--------~~~~~~K~~~~~~~~---------------------------~~~~~~e   52 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWKKY--------SLTVAVKTLKEDTME---------------------------VEEFLKE   52 (263)
T ss_pred             eEEeeecCCcccceEEEEEEecC--------CceEEEEEecCCchH---------------------------HHHHHHH
Confidence            67889999999999999998555        889999998642110                           0113457


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+.++ ++...+. ....++||||++ +|.....+..   ..++...+..+..|++.+|.+|| ..|++|+||
T Consensus        53 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~dl  130 (263)
T cd05052          53 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT-YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRDL  130 (263)
T ss_pred             HHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC-CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeeccc
Confidence            888888866542 2222111 234579999995 3433333322   24677788899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+. ++.++|+|||.+....
T Consensus       131 kp~nil~~~~~~~kl~df~~~~~~~  155 (263)
T cd05052         131 AARNCLVGENHLVKVADFGLSRLMT  155 (263)
T ss_pred             CcceEEEcCCCcEEeCCCccccccc
Confidence            99999994 6889999999986543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.65  E-value=1.2e-15  Score=140.99  Aligned_cols=137  Identities=22%  Similarity=0.191  Sum_probs=99.3

Q ss_pred             eeeecCceEEEEEEeC--CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPG--ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~--~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      .||+|+||.||+|...  .+        +..+|||+++.....                      +  ........|...
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~--------~~~~aiK~~~~~~~~----------------------~--~~~~~~~~e~~~   49 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKS--------EKTVAVKILKNDNND----------------------P--ALKDELLREANV   49 (257)
T ss_pred             cCCCcCCcceEEeEEecCCC--------ceEEEEEEccCCCCc----------------------H--HHHHHHHHHHHH
Confidence            5899999999999652  23        788999998643110                      0  011123457788


Q ss_pred             HHHhhhCCCCcccccc---ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        120 LTRMYSEGLNVPKPIL---LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~---~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      |.++.+.++.  ..+.   ....++||||++ .|.....+.. ..++...+..+..|++.+|.+|| ..|++|+||||.|
T Consensus        50 l~~l~h~~i~--~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH-~~~i~H~dlkp~n  125 (257)
T cd05116          50 MQQLDNPYIV--RMIGICEAESWMLVMELAE-LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLE-ETNFVHRDLAARN  125 (257)
T ss_pred             HHhCCCCCcc--eEEEEEcCCCcEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccchhh
Confidence            8888766532  2222   244579999996 4444333432 35788888999999999999999 5999999999999


Q ss_pred             eEEe-CCeEEEEEccccccC
Q psy10135        196 MLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+. ++.++|+|||.|...
T Consensus       126 ill~~~~~~kl~Dfg~~~~~  145 (257)
T cd05116         126 VLLVTQHYAKISDFGLSKAL  145 (257)
T ss_pred             EEEcCCCeEEECCCcccccc
Confidence            9995 578999999998654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.65  E-value=7.8e-16  Score=145.01  Aligned_cols=143  Identities=15%  Similarity=0.176  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|....+        |+.||||+++....  .  .                    ........|
T Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~--------~~~v~iK~~~~~~~--~--~--------------------~~~~~~~~e   56 (302)
T cd07864           9 FDIIGQIGEGTYGQVYKARDKDT--------GELVALKKVRLDNE--K--E--------------------GFPITAIRE   56 (302)
T ss_pred             hheeeeecccCCEEEEEEEECCC--------CcEEEEEEEeeccc--c--c--------------------CchHHHHHH
Confidence            78899999999999999998656        89999999875210  0  0                    001123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-----------ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-----------LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-----------~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      +..+.++.+.++. +...+.           ....+|||||++  |.....+..  ..++...+..++.|++.+|.+|| 
T Consensus        57 ~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-  133 (302)
T cd07864          57 IKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD--HDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH-  133 (302)
T ss_pred             HHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccC--ccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            8888888765532 111111           124679999995  433333332  35788899999999999999999 


Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..||+|+||+|.||++. ++.++|+|||.+...
T Consensus       134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~  166 (302)
T cd07864         134 KKNFLHRDIKCSNILLNNKGQIKLADFGLARLY  166 (302)
T ss_pred             hCCeecCCCCHHHEEECCCCcEEeCcccccccc
Confidence            49999999999999995 578999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.65  E-value=2e-15  Score=146.80  Aligned_cols=144  Identities=17%  Similarity=0.165  Sum_probs=106.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |+.||||+++......                        .......+
T Consensus        18 ~y~~~~~lg~G~~g~v~~~~~~~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~~~   65 (345)
T cd07877          18 RYQNLSPVGSGAYGSVCAAFDTKT--------GLRVAVKKLSRPFQSI------------------------IHAKRTYR   65 (345)
T ss_pred             ceEEEEEeeecCCeEEEEEEEcCC--------CeEEEEEEecCcchhh------------------------HHHHHHHH
Confidence            489999999999999999988566        8999999886421100                        00112346


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+.++.++.+.+| .....+.       ....+++|+++|  +.....+....++...+..++.|++.+|.+|| ..|++
T Consensus        66 Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~--~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~iv  142 (345)
T cd07877          66 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SADII  142 (345)
T ss_pred             HHHHHHHcCCCcccceeeeeeecccccccccEEEEehhcc--cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCee
Confidence            8888888877653 2222221       123578999984  43333334446888889999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+||||.||++. ++.++|+|||.+...
T Consensus       143 H~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877         143 HRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             ecCCChHHEEEcCCCCEEEecccccccc
Confidence            999999999995 688999999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=8.2e-16  Score=145.27  Aligned_cols=149  Identities=16%  Similarity=0.124  Sum_probs=101.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcc----c--ccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYK----I--ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMV  109 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~----~--~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~v  109 (351)
                      .|++.+.||+|+||.||+|.......    .  ...+....||||++++....                         ..
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~   60 (295)
T cd05097           6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK-------------------------TA   60 (295)
T ss_pred             hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH-------------------------HH
Confidence            47899999999999999997632100    0  00011235899998752110                         01


Q ss_pred             HHHHHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-------------CCCCHHHHHHHHHH
Q psy10135        110 RTWAEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-------------TPLTESGACKLYRE  172 (351)
Q Consensus       110 k~~aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-------------~~l~~~~~~~l~~q  172 (351)
                      .....+|+..|.++.+.++  +..+.    ....++||||+. +|.....+..             ..++...+..++.+
T Consensus        61 ~~~~~~ei~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  137 (295)
T cd05097          61 RNDFLKEIKIMSRLKNPNI--IRLLGVCVSDDPLCMITEYME-NGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQ  137 (295)
T ss_pred             HHHHHHHHHHHHhCCCCCc--CeEEEEEcCCCccEEEEecCC-CCcHHHHHHhccccccccccccCCcccHHHHHHHHHH
Confidence            1123568899999987653  22222    245589999995 3333222211             12456677889999


Q ss_pred             HHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        173 CVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       173 ll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ++.+|.+|| ..|++|+||||.|||+. ++.++|+|||.+..
T Consensus       138 i~~al~~lH-~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~  178 (295)
T cd05097         138 IASGMKYLA-SLNFVHRDLATRNCLVGNHYTIKIADFGMSRN  178 (295)
T ss_pred             HHHHHHHHH-hcCeeccccChhhEEEcCCCcEEecccccccc
Confidence            999999999 59999999999999995 57899999999854

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.65  E-value=9.7e-16  Score=145.62  Aligned_cols=141  Identities=22%  Similarity=0.205  Sum_probs=104.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.+..+        ++.||||.++.......                      .. ......|
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~--------~~~v~ik~~~~~~~~~~----------------------~~-~~~~~~e   51 (305)
T cd05609           3 FETIKLISNGAYGAVYLVRHKET--------RQRFAMKKINKQNLILR----------------------NQ-IQQVFVE   51 (305)
T ss_pred             ceEeeEeecCCCeeEEEEEECCC--------CcEEEEEEeehhhhhhH----------------------HH-HHHHHHH
Confidence            78889999999999999998666        89999998865321000                      01 1123467


Q ss_pred             HHHHHHhhhCCCCcccccc---c-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL---L-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~---~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ...++++.+.+|  +..+.   . ...++||||+. +|.....+.. ..++...+..++.+++.+|.+|| ..|++||||
T Consensus        52 ~~~l~~~~~~~i--~~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl  127 (305)
T cd05609          52 RDILTFAENPFV--VSMFCSFETKRHLCMVMEYVE-GGDCATLLKNIGALPVDMARMYFAETVLALEYLH-NYGIVHRDL  127 (305)
T ss_pred             HHHHHhCCCCCe--eeeEEEEecCCEEEEEEecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCC
Confidence            888888877653  23332   2 33479999995 3333333332 35777888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av  212 (351)
                      ||.|||+. .+.++|+|||.+.
T Consensus       128 ~p~NIll~~~~~~~l~dfg~~~  149 (305)
T cd05609         128 KPDNLLITSMGHIKLTDFGLSK  149 (305)
T ss_pred             chHHEEECCCCCEEEeeCCCcc
Confidence            99999995 5789999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.65  E-value=1.8e-15  Score=136.63  Aligned_cols=142  Identities=23%  Similarity=0.241  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        |..+|+|+++....  +                        ......+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~--~------------------------~~~~~~~e   47 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRT--------GKEVAIKVIKLESK--E------------------------KKEKIINE   47 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCC--------CcEEEEEEecccch--h------------------------HHHHHHHH
Confidence            77889999999999999998556        89999999976321  0                        01123467


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccc-ccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAK-LKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~-L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..+.++.+.++  +..+.    ....+++|||++  |..+.. +..  ..++...+..++.+++.++.+|| .+|++|+
T Consensus        48 ~~~l~~l~~~~i--~~~~~~~~~~~~~~l~~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh-~~~i~h~  122 (253)
T cd05122          48 IQILKKCKHPNI--VKYYGSYLKKDELWIVMEFCS--GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH-SNGIIHR  122 (253)
T ss_pred             HHHHHhCCCCCE--eEEEEEEecCCeEEEEEecCC--CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh-cCCEecC
Confidence            888888876553  22222    245679999995  333333 222  35788889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCCCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~~p  217 (351)
                      ||+|.||++. ++.++|+|||.+....+.
T Consensus       123 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122         123 DIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCCHHHEEEccCCeEEEeecccccccccc
Confidence            9999999995 678999999999776544

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.64  E-value=1.2e-15  Score=142.32  Aligned_cols=148  Identities=19%  Similarity=0.134  Sum_probs=102.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|......   .......||+|.++.....                         .......+|
T Consensus         7 ~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~~~~v~~K~~~~~~~~-------------------------~~~~~~~~e   58 (283)
T cd05048           7 VRFLEELGEGAFGKVYKGELTGPN---ERLSATSVAIKTLKENAEP-------------------------KVQQEFRQE   58 (283)
T ss_pred             cchhhcccCccCCcEEEEEEecCC---CCcceeeEEEEecccCCCH-------------------------HHHHHHHHH
Confidence            678899999999999999863320   0011367999987642100                         011123468


Q ss_pred             HHHHHHhhhCCCCccccc--cccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPI--LLKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECVVMM  177 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi--~~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll~~L  177 (351)
                      +..|.++.+.++...-.+  .....+++|||+. +|.....+..                 ..++...+..++.|++.+|
T Consensus        59 i~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al  137 (283)
T cd05048          59 AELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLA-HGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGM  137 (283)
T ss_pred             HHHHHhcCCcccceEEEEEcCCCceEEEEecCC-CCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            888888877653221111  1245689999995 3433222221                 2366778889999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .+|| ..|++|+||||.|||+. ++.++|+|||.+...
T Consensus       138 ~~lH-~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~  174 (283)
T cd05048         138 EYLS-SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDI  174 (283)
T ss_pred             HHHH-hCCeeccccccceEEEcCCCcEEECCCcceeec
Confidence            9999 59999999999999995 578999999998643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.5e-15  Score=141.29  Aligned_cols=145  Identities=17%  Similarity=0.208  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||.|++|.||+|.+..+        |+.||||+++.....                       ...  ....+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~--------~~~~~iK~~~~~~~~-----------------------~~~--~~~~~   48 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPT--------GRVVALKIINLDTPD-----------------------DDV--SDIQR   48 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCC--------CcEEEEEEecCCCCc-----------------------hhH--HHHHH
Confidence            478889999999999999998666        899999998642100                       000  11246


Q ss_pred             HHHHHHHhh---hCCC-Cccccc-cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMY---SEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~---~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..+.++.   +.++ +....+ .....++||||+. +|.....+....++...+..++.+++.+|.+|| ..|++|+|
T Consensus        49 e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh-~~~i~H~d  126 (277)
T cd06917          49 EVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE-GGSVRTLMKAGPIAEKYISVIIREVLVALKYIH-KVGVIHRD  126 (277)
T ss_pred             HHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC-CCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-hCCcccCC
Confidence            778888886   2221 111111 1234679999995 233323333446788888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+|.||++. ++.++|+|||.+....
T Consensus       127 l~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917         127 IKAANILVTNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             cCHHHEEEcCCCCEEEccCCceeecC
Confidence            999999995 6899999999886553

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.5e-15  Score=136.92  Aligned_cols=143  Identities=15%  Similarity=0.145  Sum_probs=107.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|.+|.||+|....+        ++.||||.+......                        ........+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~------------------------~~~~~~~~~e   49 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLET--------GDFVAIKQISLEKIK------------------------EEALKSIMQE   49 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCC--------CcEEEEEEecccccC------------------------HHHHHHHHHH
Confidence            77889999999999999988556        889999998763210                        0011234678


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccc-ccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAK-LKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~-L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..+.++.+.++.  .++.    ....++||||++  |..+.. +.. ..++...+..++.+++.++.+|| ..|++|+|
T Consensus        50 ~~~l~~l~~~~i~--~~~~~~~~~~~~~~v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH-~~~i~H~d  124 (254)
T cd06627          50 IDLLKNLKHPNIV--KYIGSIETSDSLYIILEYAE--NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLH-EQGVIHRD  124 (254)
T ss_pred             HHHHHhCCCCCcc--EEEEEEEeCCEEEEEEecCC--CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHh-hCCcccCC
Confidence            8888888766532  2222    244579999995  433332 222 45788888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |+|.||++. ++.++|+|||.+.....
T Consensus       125 l~p~ni~i~~~~~~~l~d~~~~~~~~~  151 (254)
T cd06627         125 IKAANILTTKDGVVKLADFGVATKLND  151 (254)
T ss_pred             CCHHHEEECCCCCEEEeccccceecCC
Confidence            999999995 58899999999976643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.64  E-value=2.2e-15  Score=138.52  Aligned_cols=143  Identities=17%  Similarity=0.094  Sum_probs=106.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|....+        ++.||||+++.....                        .....+...|
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~------------------------~~~~~~~~~e   49 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDT--------GELMAVKEIRIQDND------------------------PKTIKEIADE   49 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCC--------CcEEEEEEEECcccc------------------------hHHHHHHHHH
Confidence            78889999999999999988556        899999998764211                        0112234568


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..++++.+.++  ...+.    ....++||||+. .+.....+.. ..++...+..++.+++.+|.+|| ..|++|+||
T Consensus        50 ~~~~~~l~~~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh-~~~i~H~dl  125 (264)
T cd06626          50 MKVLELLKHPNL--VKYYGVEVHREKVYIFMEYCS-GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLH-SHGIVHRDI  125 (264)
T ss_pred             HHHHHhCCCCCh--hheeeeEecCCEEEEEEecCC-CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHH-HCCcccCCC
Confidence            888988876653  22222    245679999995 3333332322 23677788899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.||++. ++.++|+|||.+....
T Consensus       126 ~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626         126 KPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             CHHHEEECCCCCEEEcccccccccC
Confidence            99999995 5789999999987653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.64  E-value=1.9e-15  Score=139.73  Aligned_cols=146  Identities=16%  Similarity=0.165  Sum_probs=105.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.. .+        |+.+|||+++.........                   ... .....+|
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~-~~--------~~~~avk~~~~~~~~~~~~-------------------~~~-~~~~~~e   52 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLT-NQ--------GQLIAVKQVELDTSNVLAA-------------------EKE-YEKLQEE   52 (265)
T ss_pred             ccccceEeccCCeEEEEEEE-cC--------CCeEEEEEeecCccchhhH-------------------HHH-HHHHHHH
Confidence            67889999999999999987 56        8899999987532111000                   001 1124568


Q ss_pred             HHHHHHhhhCCCC-ccccc-cccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|+++.+.++. ....+ .....++||||+. .|.....+.. ..++...+..++.|++.+|.+|| ..|++|+||+|
T Consensus        53 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p  130 (265)
T cd06631          53 VDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVP-GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH-NNCVVHRDIKG  130 (265)
T ss_pred             HHHHHhcCCCCEeeEeeEeecCCeEEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCcCH
Confidence            8889998766532 11111 1245689999995 3333333333 35778888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEcccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .||++. ++.++|+|||.+..
T Consensus       131 ~nil~~~~~~~~l~dfg~~~~  151 (265)
T cd06631         131 NNVMLMPNGIIKLIDFGCARR  151 (265)
T ss_pred             HhEEECCCCeEEeccchhhHh
Confidence            999995 68999999998854

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.64  E-value=1.7e-15  Score=139.33  Aligned_cols=140  Identities=17%  Similarity=0.147  Sum_probs=104.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++...||.|++|.||+|.. .         |+.||||.++....                           .......
T Consensus         7 ~~~~~~~ig~g~~g~v~~~~~-~---------~~~v~iK~~~~~~~---------------------------~~~~~~~   49 (256)
T cd05039           7 ELKLGATIGKGEFGDVMLGDY-R---------GQKVAVKCLKDDST---------------------------AAQAFLA   49 (256)
T ss_pred             hccceeeeecCCCceEEEEEe-c---------CcEEEEEEeccchh---------------------------HHHHHHH
Confidence            478889999999999999986 3         78999999865311                           0112345


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |...+.++.+.++. ....+. ....++||||++ .|.....+...   .++...+..++.|++.++.+|| .+|++|+|
T Consensus        50 e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh-~~~i~H~d  127 (256)
T cd05039          50 EASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA-KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE-EKNFVHRD  127 (256)
T ss_pred             HHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC-CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCccchh
Confidence            78888888766532 111111 245689999995 34433333222   4788889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.||+++ ++.++|+|||.+...
T Consensus       128 i~p~Nili~~~~~~~l~d~g~~~~~  152 (256)
T cd05039         128 LAARNVLVSEDLVAKVSDFGLAKEA  152 (256)
T ss_pred             cccceEEEeCCCCEEEccccccccc
Confidence            999999995 588999999988654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.64  E-value=2.4e-15  Score=138.88  Aligned_cols=149  Identities=15%  Similarity=0.144  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||+|++|.||.|.+..+        |+.+|||+++.......                    ...........|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~--------~~~~alk~~~~~~~~~~--------------------~~~~~~~~~~~e   53 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKT--------GTLMAVKQVTYVRNTSS--------------------EQEEVVEALRKE   53 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCC--------CcEEEEEEeecccCCch--------------------hHHHHHHHHHHH
Confidence            67789999999999999998666        89999999864211000                    001112234568


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|++|.+.++ ++...+.. ...++||||+. .|.....+.. .+++...+..++.||+.+|.+|| .+|++|+||+|
T Consensus        54 ~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH-~~~i~H~~i~~  131 (268)
T cd06630          54 IRLMARLNHPHIIRMLGATCEDSHFNLFVEWMA-GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH-ENQIIHRDVKG  131 (268)
T ss_pred             HHHHHHcCCCceehhhceeccCCeEEEEEeccC-CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCH
Confidence            899999977653 22222222 44579999994 3333333332 45778888999999999999999 59999999999


Q ss_pred             CceEEe-CC-eEEEEEccccccCC
Q psy10135        194 YNMLVH-KA-TLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g-~l~IIDFG~Av~~~  215 (351)
                      .||++. ++ .++|+|||.+....
T Consensus       132 ~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630         132 ANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             HHEEEcCCCCEEEEcccccccccc
Confidence            999995 33 69999999986654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.64  E-value=1e-15  Score=147.66  Aligned_cols=145  Identities=19%  Similarity=0.181  Sum_probs=107.1

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      --|++.+.||.|++|.||+|.+..+        |..||||++.......                       .. .....
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~--------~~~valK~~~~~~~~~-----------------------~~-~~~~~   52 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRS--------GKKVAIKKIPHAFDVP-----------------------TL-AKRTL   52 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCC--------CCEEEEEEeccccccc-----------------------cc-hHHHH
Confidence            3588999999999999999998666        9999999886521100                       00 11234


Q ss_pred             HHHHHHHHhhhCCC-Ccccccc-----ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPIL-----LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi~-----~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      .|+..|.++.+.+| .+...+.     ....++||||++  |.....+. ...++...+..++.||+.+|.+|| .+|+|
T Consensus        53 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~iv  129 (334)
T cd07855          53 RELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME--SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIH-SANVI  129 (334)
T ss_pred             HHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh--hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCee
Confidence            58888888876653 2222221     134579999995  43333332 235788889999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+||||.|||+. ++.++|+|||.+...
T Consensus       130 H~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855         130 HRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             cCCCCHHHEEEcCCCcEEecccccceee
Confidence            999999999994 689999999998543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.64  E-value=1e-15  Score=141.12  Aligned_cols=142  Identities=19%  Similarity=0.110  Sum_probs=101.7

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|++|.||+|.....     .+.+..+|||+++.....                         ........|+..|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~-----~~~~~~~~iK~~~~~~~~-------------------------~~~~~~~~e~~~l   50 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMK-----SGKEVEVAVKTLKQEHIA-------------------------AGKKEFLREASVM   50 (257)
T ss_pred             CccCccCceeEEEeEeecc-----CCCcceEEEEecccccch-------------------------HHHHHHHHHHHHH
Confidence            4799999999999976332     111378999998753211                         0111234578888


Q ss_pred             HHhhhCCC-CccccccccceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        121 TRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      +++.+.++ .+.........++||||+. .|.....+... .++...+..+..|++.+|.+|| .+|++|+||||.|||+
T Consensus        51 ~~l~h~~iv~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh-~~~i~H~di~p~nili  128 (257)
T cd05060          51 AQLDHPCIVRLIGVCKGEPLMLVMELAP-LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLE-SKHFVHRDLAARNVLL  128 (257)
T ss_pred             HhcCCCCeeeEEEEEcCCceEEEEEeCC-CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHh-hcCeeccCcccceEEE
Confidence            88866553 3322223345689999995 44444444333 4788888999999999999999 5999999999999999


Q ss_pred             e-CCeEEEEEccccccC
Q psy10135        199 H-KATLFIIDVAQSVEH  214 (351)
Q Consensus       199 ~-~g~l~IIDFG~Av~~  214 (351)
                      . ++.++|+|||.+...
T Consensus       129 ~~~~~~kl~df~~~~~~  145 (257)
T cd05060         129 VNRHQAKISDFGMSRAL  145 (257)
T ss_pred             cCCCcEEecccccccee
Confidence            5 588999999998644

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.4e-15  Score=139.42  Aligned_cols=149  Identities=17%  Similarity=0.128  Sum_probs=107.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |..||||++.......                   ...  .......+
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~--------~~~~~ik~~~~~~~~~-------------------~~~--~~~~~~~~   53 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADT--------GRELAVKQVPFDPDSQ-------------------ETS--KEVNALEC   53 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCC--------CCEEEEEEEecCcccc-------------------hhh--HHHHHHHH
Confidence            488999999999999999998666        8999999875321000                   000  11123457


Q ss_pred             HHHHHHHhhhCCCC-ccccccc---cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL---KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~---~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..++++.+.++. ....+..   ...++||||+. .|.....+.. ..++...+..+..|++.+|.+|| .+|++|+|
T Consensus        54 ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH-~~~i~H~d  131 (264)
T cd06653          54 EIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMP-GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH-SNMIVHRD  131 (264)
T ss_pred             HHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCC
Confidence            88899999776642 2211111   23579999995 3333333332 35777888899999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+|.||++. ++.++|+|||.+....
T Consensus       132 l~p~ni~i~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653         132 IKGANILRDSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             CCHHHEEEcCCCCEEECccccccccc
Confidence            999999995 5789999999987543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.64  E-value=2.2e-15  Score=139.83  Aligned_cols=148  Identities=21%  Similarity=0.140  Sum_probs=107.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |..||+|+++......                    ...+ ......+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~--------~~~~~~k~~~~~~~~~--------------------~~~~-~~~~~~~   53 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDT--------GRELAAKQVQFDPESP--------------------ETSK-EVSALEC   53 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCC--------CcEEEEEEeecCcCCc--------------------hhHH-HHHHHHH
Confidence            478899999999999999998556        8999999886421100                    0001 1123467


Q ss_pred             HHHHHHHhhhCCCC-ccccccc---cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL---KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~---~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..|.+|.+.++. ....+..   ...+++|||+. .+.....+.. ..++......+..|++.+|.+|| .+|++|+|
T Consensus        54 e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH-~~~i~H~~  131 (266)
T cd06651          54 EIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMP-GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH-SNMIVHRD  131 (266)
T ss_pred             HHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCC
Confidence            88899999776642 2222211   23578999995 3333333332 34777788899999999999999 69999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|.|||++ ++.++|+|||.+...
T Consensus       132 l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651         132 IKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             CCHHHEEECCCCCEEEccCCCcccc
Confidence            999999995 578999999998654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.64  E-value=1.9e-15  Score=142.01  Aligned_cols=149  Identities=19%  Similarity=0.204  Sum_probs=103.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.....     ...|..||+|+++.......                      .........|
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~-----~~~g~~~aiK~~~~~~~~~~----------------------~~~~~~~~~e   54 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSG-----HDSGKLYAMKVLKKATIVQK----------------------AKTTEHTRTE   54 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccC-----CCCCceEEEEEeehhhhhhc----------------------chHHHHHHHH
Confidence            78899999999999999987321     01288999999875321000                      0011123468


Q ss_pred             HHHHHHhh-hCCCCcc-ccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMY-SEGLNVP-KPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~-~~gi~vP-~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.++. +.+|... ..+.. ...++||||+. +|.....+. ...++...+..+..|++.+|.+|| ..|++|+||+
T Consensus        55 ~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH-~~~i~H~dl~  132 (290)
T cd05613          55 RQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYIN-GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLH-KLGIIYRDIK  132 (290)
T ss_pred             HHHHHhcccCCChhceeeEeecCCeEEEEEecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCC
Confidence            88888885 3433211 11112 33479999995 444433333 235778888888889999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |.|||+ .++.++|+|||.+...
T Consensus       133 p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613         133 LENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             HHHeEECCCCCEEEeeCccceec
Confidence            999999 4689999999988654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.64  E-value=1.7e-15  Score=142.52  Aligned_cols=140  Identities=16%  Similarity=0.165  Sum_probs=94.3

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .||+|+||.||+|.+..+        |+.+|||+++........                       .......|...+.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~--------~~~~aiK~~~~~~~~~~~-----------------------~~~~~~~~~~~~~   49 (279)
T cd05633           1 IIGRGGFGEVYGCRKADT--------GKMYAMKCLDKKRIKMKQ-----------------------GETLALNERIMLS   49 (279)
T ss_pred             CcccCCCeEEEEEEECCC--------CcEEEEEEEEccccccch-----------------------HHHHHHHHHHHHH
Confidence            489999999999998556        899999998753211110                       0011122332233


Q ss_pred             Hhh---hCCCC-cccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        122 RMY---SEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       122 rL~---~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      .+.   +.++. +...+. .+..++||||+. +|.....+. ...++...+..++.|++.+|.+|| ..|++|+||||.|
T Consensus        50 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH-~~~ivH~dikp~N  127 (279)
T cd05633          50 LVSTGDCPFIVCMTYAFHTPDKLCFILDLMN-GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMH-NRFVVYRDLKPAN  127 (279)
T ss_pred             HHhhCCCCcEeEEEEEEecCCeEEEEEecCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcCCCCCCHHH
Confidence            222   12211 111111 245679999995 343333333 345888889999999999999999 5999999999999


Q ss_pred             eEEe-CCeEEEEEccccccC
Q psy10135        196 MLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+. ++.++|+|||.+...
T Consensus       128 il~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633         128 ILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             EEECCCCCEEEccCCcceec
Confidence            9994 688999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.64  E-value=2.3e-15  Score=138.33  Aligned_cols=145  Identities=12%  Similarity=0.060  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||.+....+        |..+|+|.+......                      +.  ......+|
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~--------~~~~~~k~~~~~~~~----------------------~~--~~~~~~~e   49 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTED--------DSLVVWKEVNLTRLS----------------------EK--ERRDALNE   49 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCC--------CcEEEEEEEeecccc----------------------hh--HHHHHHHH
Confidence            78899999999999999998666        899999987642111                      00  01123578


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|+++.+.++ ++...+. ....++||||+. .|.....+..   ..++..++..++.+++.+|.+|| .+|++|+||
T Consensus        50 ~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl  127 (256)
T cd08221          50 IVILSLLQHPNIIAYYNHFMDDNTLLIEMEYAN-GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH-KAGILHRDI  127 (256)
T ss_pred             HHHHHhCCCCCeeEEEeEEecCCeEEEEEEecC-CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH-hCCccccCC
Confidence            899999877653 2222222 244579999995 3443333332   34778888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.||++. ++.++|+|||.+....
T Consensus       128 ~p~ni~~~~~~~~kl~d~~~~~~~~  152 (256)
T cd08221         128 KTLNIFLTKAGLIKLGDFGISKILG  152 (256)
T ss_pred             ChHhEEEeCCCCEEECcCcceEEcc
Confidence            99999995 5789999999987553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.64  E-value=1.6e-15  Score=147.15  Aligned_cols=145  Identities=17%  Similarity=0.154  Sum_probs=105.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|++|.||+|.+..+        +..||||++........                       . .....+
T Consensus        16 ~y~~~~~ig~g~~g~vy~~~~~~~--------~~~~aiK~~~~~~~~~~-----------------------~-~~~~~~   63 (343)
T cd07851          16 RYQNLSPVGSGAYGQVCSAFDTKT--------GRKVAIKKLSRPFQSAI-----------------------H-AKRTYR   63 (343)
T ss_pred             ceEEEEEeccCCceEEEEEEECCC--------CcEEEEEecccccchhh-----------------------H-HHHHHH
Confidence            389999999999999999998666        89999998764211000                       0 011235


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..++++.+.++ ++...+..       ...++||||+|  +.....+....++..++..++.|++.+|.+|| ..|++
T Consensus        64 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH-~~gi~  140 (343)
T cd07851          64 ELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG--ADLNNIVKCQKLSDDHIQFLVYQILRGLKYIH-SAGII  140 (343)
T ss_pred             HHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC--CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCee
Confidence            6777777755542 11111111       23689999995  43333344456888899999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+||+|.||++. ++.++|+|||.+....
T Consensus       141 H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851         141 HRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             cCCCCHHHeEECCCCCEEEcccccccccc
Confidence            999999999995 5889999999997653

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=1.2e-15  Score=143.27  Aligned_cols=143  Identities=19%  Similarity=0.149  Sum_probs=106.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|++|.||+|....+        |..||+|++.....                         .........
T Consensus         6 ~~~~~~~ig~g~~g~v~~~~~~~~--------~~~~a~k~~~~~~~-------------------------~~~~~~~~~   52 (284)
T cd06620           6 DLETISDLGAGNGGSVSKVKHIPT--------GTVMAKKVVHIGAK-------------------------SSVRKQILR   52 (284)
T ss_pred             HHHHHHHcCCCCCeEEEEEEEcCC--------CcEEEEEEEEecCc-------------------------chHHHHHHH
Confidence            377889999999999999998666        89999999864210                         001122356


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..+..+.+.++.  +.+.    ....+|||||++ .|.....+.. ..++...+..++.+++.+|.+||+..|++|+|
T Consensus        53 E~~~l~~l~h~~i~--~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d  129 (284)
T cd06620          53 ELQIMHECRSPYIV--SFYGAFLNENNICMCMEFMD-CGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRD  129 (284)
T ss_pred             HHHHHHHcCCCCcc--eEeeeEecCCEEEEEEecCC-CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccC
Confidence            88888888766532  2222    245689999996 3333222322 35778888899999999999999657999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|.||++. ++.++|+|||.+...
T Consensus       130 l~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620         130 IKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             CCHHHEEECCCCcEEEccCCcccch
Confidence            999999995 588999999987543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.64  E-value=1.5e-15  Score=147.61  Aligned_cols=148  Identities=17%  Similarity=0.126  Sum_probs=99.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||.|+||.||+|.....   .....++.||+|+++.... ..                       .. ....+|
T Consensus         9 ~~i~~~lG~G~fg~Vy~a~~~~~---~~~~~~~~va~K~~~~~~~-~~-----------------------~~-~~~~~E   60 (337)
T cd05054           9 LKLGKPLGRGAFGKVIQASAFGI---EKSASCRTVAVKMLKEGAT-AS-----------------------EY-KALMTE   60 (337)
T ss_pred             hhhhcccccCcCceEEecccccc---ccccccceeeeeeccCCCC-HH-----------------------HH-HHHHHH
Confidence            78899999999999999974221   0001257899999874210 00                       00 112457


Q ss_pred             HHHHHHh-hhCCC-Cccccccc--cceEEEEcccCcccccccccc-----------------------------------
Q psy10135        117 MRNLTRM-YSEGL-NVPKPILL--KSHVLLMTFIGEDGWPAAKLK-----------------------------------  157 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~~--~~~vLVMEfig~~G~~~~~L~-----------------------------------  157 (351)
                      +..+.++ .+.+| +.......  ...+++|||+. .|.....+.                                   
T Consensus        61 ~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (337)
T cd05054          61 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCK-FGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSS  139 (337)
T ss_pred             HHHHHhhccCcchhheeeeEecCCCCEEEEEecCC-CCCHHHHHHhccccccccccccccccccccccccccccccCCcc
Confidence            8888888 44442 11111111  23568999995 232211111                                   


Q ss_pred             ---------------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcc
Q psy10135        158 ---------------------------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVA  209 (351)
Q Consensus       158 ---------------------------~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG  209 (351)
                                                 ..+++...+..++.||+.+|.+|| .+|||||||||.|||++ ++.++|+|||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH-~~~ivHrDikp~Nill~~~~~vkL~DfG  218 (337)
T cd05054         140 QSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA-SRKCIHRDLAARNILLSENNVVKICDFG  218 (337)
T ss_pred             ccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCcceEEEeCCCcEEEeccc
Confidence                                       014566778899999999999999 59999999999999996 6889999999


Q ss_pred             ccccC
Q psy10135        210 QSVEH  214 (351)
Q Consensus       210 ~Av~~  214 (351)
                      .|...
T Consensus       219 ~a~~~  223 (337)
T cd05054         219 LARDI  223 (337)
T ss_pred             cchhc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.64  E-value=2.1e-15  Score=140.03  Aligned_cols=146  Identities=19%  Similarity=0.150  Sum_probs=103.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|....+     ...+..+|||.++.....                        .. ......|
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~~~~ik~~~~~~~~------------------------~~-~~~~~~e   55 (267)
T cd05066           6 IKIEKVIGAGEFGEVCSGRLKLP-----GKREIPVAIKTLKAGYTE------------------------KQ-RRDFLSE   55 (267)
T ss_pred             eEeeeeecccCCCceEEEEEecC-----CCCceEEEEEECCCCCCH------------------------HH-HHHHHHH
Confidence            67899999999999999987332     001347999987642210                        01 1123568


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++.+.++ ++...+. ....++||||+. .|.....+..  ..++..++..++.|++.++.+|| ..|++|+|||
T Consensus        56 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~h~dlk  133 (267)
T cd05066          56 ASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME-NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS-DMGYVHRDLA  133 (267)
T ss_pred             HHHHHhCCCCCcceEEEEEecCCccEEEEEcCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeehhhc
Confidence            888888876663 2222221 244579999995 3433333322  34778888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.+...
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd05066         134 ARNILVNSNLVCKVSDFGLSRVL  156 (267)
T ss_pred             hhcEEECCCCeEEeCCCCccccc
Confidence            9999995 688999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.64  E-value=1.5e-15  Score=141.18  Aligned_cols=142  Identities=17%  Similarity=0.218  Sum_probs=104.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.+..+        +..||||+++....   ...                      .....+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~aik~~~~~~~---~~~----------------------~~~~~~e   47 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKT--------GKYYAIKCMKKHFK---SLE----------------------QVNNLRE   47 (282)
T ss_pred             CceEeeccccccceEEEEEEcCC--------CcEEEEEEehhccC---Cch----------------------hhhHHHH
Confidence            67889999999999999998666        89999999875311   000                      0011246


Q ss_pred             HHHHHHhh-hCCC-Ccccccc-c--cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMY-SEGL-NVPKPIL-L--KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi~-~--~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ...|.++. +.++ .....+. .  ...++||||++  |.....+..  ..++..++..++.|++.+|.+|| ..|++|+
T Consensus        48 ~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH-~~~i~H~  124 (282)
T cd07831          48 IQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD--MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH-RNGIFHR  124 (282)
T ss_pred             HHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC--ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCceec
Confidence            77777775 3332 2222211 1  45689999994  544444443  35788889999999999999999 5999999


Q ss_pred             CCCCCceEEeCCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVHKATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~~g~l~IIDFG~Av~~  214 (351)
                      ||+|.||++..+.++|+|||.+...
T Consensus       125 dl~p~ni~l~~~~~kl~dfg~~~~~  149 (282)
T cd07831         125 DIKPENILIKDDILKLADFGSCRGI  149 (282)
T ss_pred             ccCHHHEEEcCCCeEEEeccccccc
Confidence            9999999997799999999998754

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0586|consensus

Probab=99.64  E-value=8.5e-16  Score=157.05  Aligned_cols=146  Identities=22%  Similarity=0.191  Sum_probs=115.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.|.+.||.|.|+.|.+|.+.-+        |..||||++..+.+..                      ....+  .-+
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t--------~~~VaiK~idkt~ln~----------------------~~~~k--~~r  104 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILT--------GTEVAIKIIDKTQLNP----------------------SKRQK--LGR  104 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCC--------CceEEEEEehhcccCh----------------------HHHHH--HHH
Confidence            599999999999999999998666        9999999998754322                      22222  357


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+++|+.|.+.+| .+-.++.. ...+|||||.- .|.....|. ...+.+..++.+|.|++.++.+|| ..+|||||||
T Consensus       105 ev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~-~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH-~k~ivHrdLk  182 (596)
T KOG0586|consen  105 EVDIMKSLNHPNIVKLFSVIETEATLYLVMEYAS-GGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCH-SKNIVHRDLK  182 (596)
T ss_pred             HHHHHHhcCCcceeeeeeeeeecceeEEEEEecc-CchhHHHHHhcccchhhhhhhhhHHHHHHHHHHh-hcceeccccc
Confidence            8999999987764 55555553 45689999996 465555554 356777889999999999999999 4899999999


Q ss_pred             CCceEEeCC-eEEEEEccccccCC
Q psy10135        193 EYNMLVHKA-TLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~~g-~l~IIDFG~Av~~~  215 (351)
                      .+|||++.. .++|.|||+|...+
T Consensus       183 ~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  183 AENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             hhhcccccccceeeeccccceeec
Confidence            999999754 59999999997653

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.63  E-value=3e-15  Score=136.96  Aligned_cols=147  Identities=16%  Similarity=0.121  Sum_probs=104.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||+|++|.||+|....+        +..||||++.......                     ...........|
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~--------~~~~~ik~~~~~~~~~---------------------~~~~~~~~~~~e   52 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDD--------GDFFAVKEVSLADDGQ---------------------TGQEAVKQLEQE   52 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCC--------CcEEEEEEEEEccccc---------------------cchHHHHHHHHH
Confidence            56778999999999999998556        8999999986421100                     000111223567


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.++.+.++ +...... ....++||||+. .+.....+.. ..++...+..+..||+.++.+|| ..|++|+||+|
T Consensus        53 ~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~~  130 (258)
T cd06632          53 IALLSKLQHPNIVQYLGTEREEDNLYIFLELVP-GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLH-DRNTVHRDIKG  130 (258)
T ss_pred             HHHHHhcCCCCchheeeeEecCCeEEEEEEecC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCH
Confidence            888888876653 2221111 245689999995 2332222322 34778888889999999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEccccccC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      .||++ .++.++|+|||.+...
T Consensus       131 ~ni~~~~~~~~kl~d~~~~~~~  152 (258)
T cd06632         131 ANILVDTNGVVKLADFGMAKQV  152 (258)
T ss_pred             HHEEECCCCCEEEccCccceec
Confidence            99999 5688999999988654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.63  E-value=1.3e-15  Score=140.23  Aligned_cols=141  Identities=19%  Similarity=0.148  Sum_probs=103.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.. ..        +..+|+|+++.....                          .......|
T Consensus         8 y~~~~~ig~g~~~~vy~~~~-~~--------~~~~~~k~~~~~~~~--------------------------~~~~~~~e   52 (261)
T cd05148           8 FTLERKLGSGYFGEVWEGLW-KN--------RVRVAIKILKSDDLL--------------------------KQQDFQKE   52 (261)
T ss_pred             HHHhhhhccCCCccEEEeEe-cC--------CCcEEEEeccccchh--------------------------hHHHHHHH
Confidence            78889999999999999998 55        789999998753210                          01123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|+++.+.++. +...+. ....++||||++ +|.....+..   ..++...+..+..+|+.++.+|| ..|++|+||
T Consensus        53 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~h~dl  130 (261)
T cd05148          53 VQALKRLRHKHLISLFAVCSVGEPVYIITELME-KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE-EQNSIHRDL  130 (261)
T ss_pred             HHHHhcCCCcchhheeeeEecCCCeEEEEeecc-cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecccc
Confidence            7888888665431 111111 134579999995 3444333332   34777888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.|||+. ++.++|+|||.+...
T Consensus       131 ~~~nilv~~~~~~kl~d~g~~~~~  154 (261)
T cd05148         131 AARNILVGEDLVCKVADFGLARLI  154 (261)
T ss_pred             CcceEEEcCCceEEEccccchhhc
Confidence            99999995 578999999998654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0193|consensus

Probab=99.63  E-value=4.8e-16  Score=158.78  Aligned_cols=138  Identities=15%  Similarity=0.159  Sum_probs=101.8

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .++..||+|.||+||+|.++.           .||||+++....+..                       +. .....|+
T Consensus       395 ~l~~rIGsGsFGtV~Rg~whG-----------dVAVK~Lnv~~pt~~-----------------------ql-qaFKnEV  439 (678)
T KOG0193|consen  395 LLGERIGSGSFGTVYRGRWHG-----------DVAVKLLNVDDPTPE-----------------------QL-QAFKNEV  439 (678)
T ss_pred             hccceeccccccceeeccccc-----------ceEEEEEecCCCCHH-----------------------HH-HHHHHHH
Confidence            467899999999999999843           599999986432211                       11 1235689


Q ss_pred             HHHHHhhhCCCCcccc-ccccceEEEEcccCcccccccc-ccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        118 RNLTRMYSEGLNVPKP-ILLKSHVLLMTFIGEDGWPAAK-LKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~p-i~~~~~vLVMEfig~~G~~~~~-L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      .+|+.-++.+|..--- .....+.||..||  +|..+.. |..  ..+.-.+.+.|++|++.+|.|||. .+|||+|||.
T Consensus       440 a~lkkTRH~NIlLFMG~~~~p~~AIiTqwC--eGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKS  516 (678)
T KOG0193|consen  440 AVLKKTRHENILLFMGACMNPPLAIITQWC--EGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKS  516 (678)
T ss_pred             HHHhhcchhhheeeehhhcCCceeeeehhc--cCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccc
Confidence            9998887766421100 0113347889999  4654433 332  346677889999999999999995 8999999999


Q ss_pred             CceEEeC-CeEEEEEcccccc
Q psy10135        194 YNMLVHK-ATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi~~-g~l~IIDFG~Av~  213 (351)
                      .||++++ ++|+|.|||++.-
T Consensus       517 nNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  517 NNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             cceEEccCCcEEEecccceee
Confidence            9999976 8999999999853

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.63  E-value=1.8e-15  Score=139.48  Aligned_cols=138  Identities=18%  Similarity=0.146  Sum_probs=101.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.. .         |..+|+|.++....                            ......|
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~-~---------~~~~~~k~~~~~~~----------------------------~~~~~~e   49 (256)
T cd05082           8 LKLLQTIGKGEFGDVMLGDY-R---------GNKVAVKCIKNDAT----------------------------AQAFLAE   49 (256)
T ss_pred             CeeeeeecccCCCeEEEEEE-c---------CCcEEEEEeCCCch----------------------------HHHHHHH
Confidence            78889999999999999976 2         77899998764210                            0012357


Q ss_pred             HHHHHHhhhCCCC-ccccc-cc-cceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLN-VPKPI-LL-KSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi-~~-~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..++++.+.++. ....+ .. ...++||||++ .|.....+...   .++...+..++.+++.+|.+|| .+|++|+|
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~d  127 (256)
T cd05082          50 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA-KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE-ANNFVHRD  127 (256)
T ss_pred             HHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC-CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeccc
Confidence            8888888765532 22111 11 34579999995 34443333321   3667788899999999999999 59999999


Q ss_pred             CCCCceEE-eCCeEEEEEccccccC
Q psy10135        191 LSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||.||++ .++.++|+|||.+...
T Consensus       128 lkp~nil~~~~~~~kl~dfg~~~~~  152 (256)
T cd05082         128 LAARNVLVSEDNVAKVSDFGLTKEA  152 (256)
T ss_pred             cchheEEEcCCCcEEecCCccceec
Confidence            99999999 4688999999998654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.63  E-value=2.5e-15  Score=141.47  Aligned_cols=146  Identities=20%  Similarity=0.150  Sum_probs=100.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.......   ...+..||+|+++....                       ...  ......|
T Consensus         8 ~~i~~~lg~G~~g~Vy~~~~~~~~~---~~~~~~vavK~~~~~~~-----------------------~~~--~~~~~~e   59 (288)
T cd05061           8 ITLLRELGQGSFGMVYEGNARDIIK---GEAETRVAVKTVNESAS-----------------------LRE--RIEFLNE   59 (288)
T ss_pred             ceeeeeecCCCCcEEEEEEEeccCC---CCcceEEEEEECCCcCC-----------------------HHH--HHHHHHH
Confidence            7889999999999999997521100   01156899998764210                       000  1123457


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-----------CCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----------TPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----------~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      ...++++.+.++  ++.+.    ....++||||+. +|.....+..           ..++...+..++.|++.+|.+||
T Consensus        60 ~~~l~~l~~~~i--~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH  136 (288)
T cd05061          60 ASVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMA-HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN  136 (288)
T ss_pred             HHHHHhCCCCCe--eeEEEEEcCCCCcEEEEeCCC-CCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            888888876543  22222    134589999995 4444433322           12344567889999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|++||||||.|||+. ++.++|+|||.|...
T Consensus       137 -~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~  169 (288)
T cd05061         137 -AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI  169 (288)
T ss_pred             -hCCCcCCCCChheEEEcCCCcEEECcCCccccc
Confidence             59999999999999995 588999999988643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.63  E-value=2.3e-15  Score=139.84  Aligned_cols=145  Identities=19%  Similarity=0.139  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|....+        |+.+|||.++......                        ........|
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~------------------------~~~~~~~~e   48 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLT--------GEIVAIKKIKLRFESE------------------------GIPKTALRE   48 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCC--------CcEEEEEEeccccccc------------------------hhHHHHHHH
Confidence            67789999999999999998556        8999999887532110                        011223457


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|+++.+.++ ++...+.. ...++||||++  +.....+..  ..++...+..++.+++.+|.+|| ..|++|+||+
T Consensus        49 ~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dl~  125 (283)
T cd05118          49 IKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD--TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH-SHGILHRDLK  125 (283)
T ss_pred             HHHHHHhcCCCcchHHHhhccCCCEEEEEeccC--CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH-HCCeeecCcC
Confidence            888888876553 22222222 44579999995  444333333  36788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |.||++. ++.++|+|||.+.....
T Consensus       126 p~nili~~~~~~~l~df~~~~~~~~  150 (283)
T cd05118         126 PENLLINTEGVLKLADFGLARSFGS  150 (283)
T ss_pred             HHHEEECCCCcEEEeeeeeeEecCC
Confidence            9999995 58899999999865543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.63  E-value=2.3e-15  Score=139.88  Aligned_cols=148  Identities=17%  Similarity=0.073  Sum_probs=104.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.....    ....+..+|||+++.....                         .......+|
T Consensus         6 ~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~~~avK~~~~~~~~-------------------------~~~~~~~~e   56 (284)
T cd05038           6 LKFIKQLGEGHFGKVELCRYDPL----GDNTGEQVAVKSLNHSGEE-------------------------QHRSDFERE   56 (284)
T ss_pred             chhheeeccCCCeeEEEeeecCC----CCCCceEEEEEEeccccch-------------------------HHHHHHHHH
Confidence            56779999999999999985211    0112789999998753211                         111234568


Q ss_pred             HHHHHHhhhCCCCc-ccccc---ccceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNV-PKPIL---LKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi~---~~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..++++.+.++.. .....   ....++||||+. .|.....+...  .++...+..++.+|+.+|.+|| ..|++|+|
T Consensus        57 i~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH-~~~i~H~d  134 (284)
T cd05038          57 IEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLP-SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG-SQRYIHRD  134 (284)
T ss_pred             HHHHHhCCCCChheEEeeeecCCCCceEEEEecCC-CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH-hCCeecCC
Confidence            88888887655321 11111   124689999995 33333333332  3777888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.+....
T Consensus       135 l~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038         135 LAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             CCHHhEEEcCCCCEEEcccccccccc
Confidence            999999995 5889999999997654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.63  E-value=1.4e-15  Score=139.46  Aligned_cols=145  Identities=11%  Similarity=0.112  Sum_probs=95.7

Q ss_pred             ceeeecCceEEEEEEeCCCccc--ccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKI--ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~--~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.||+|+||.||+|....+...  ........+++|+++.....                           ......|+.
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---------------------------~~~~~~e~~   53 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---------------------------SLAFFETAS   53 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---------------------------HHHHHHHHH
Confidence            4689999999999998433000  00000134777876542100                           112235677


Q ss_pred             HHHHhhhCCC-CccccccccceEEEEcccCccccccccccc-C-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        119 NLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD-T-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       119 nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~-~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      .|+++.+.++ ++.........++||||++ .|.....+.. . .++...+..++.||+.+|.+|| .+||+|+||||.|
T Consensus        54 ~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dlkp~N  131 (259)
T cd05037          54 LMSQLSHKHLVKLYGVCVRDENIMVEEYVK-FGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE-DKKLVHGNVCGKN  131 (259)
T ss_pred             HHHcCCCcchhheeeEEecCCcEEEEEcCC-CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh-hCCeecccCccce
Confidence            7777766553 1211111246689999996 4443333332 2 4777888899999999999999 5999999999999


Q ss_pred             eEEeC-C-------eEEEEEccccccC
Q psy10135        196 MLVHK-A-------TLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~~-g-------~l~IIDFG~Av~~  214 (351)
                      ||+.. +       .++|+|||.+...
T Consensus       132 ill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037         132 ILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EEEecCccccCCceeEEeCCCCccccc
Confidence            99954 4       6999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=1.8e-15  Score=140.81  Aligned_cols=145  Identities=19%  Similarity=0.206  Sum_probs=107.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |..||||++.....     .                  . .. .....|
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~-----~------------------~-~~-~~~~~e   49 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRT--------NQVVAIKVIDLEEA-----E------------------D-EI-EDIQQE   49 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCC--------CeEEEEEEeecccc-----c------------------h-HH-HHHHHH
Confidence            67889999999999999998666        89999999864210     0                  0 00 112468


Q ss_pred             HHHHHHhhhCCCCc-cccc-cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLNV-PKPI-LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi-~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +..++.+.+.++.. ...+ .....++||||++ .|.....+....++...+..++.|++.++.+|| ..|++|+||+|.
T Consensus        50 ~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh-~~~i~h~dl~p~  127 (274)
T cd06609          50 IQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG-GGSCLDLLKPGKLDETYIAFILREVLLGLEYLH-EEGKIHRDIKAA  127 (274)
T ss_pred             HHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC-CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHH
Confidence            88888887665322 1111 1244579999995 344433444446888899999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccCCC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      ||++. ++.++|+|||.+.....
T Consensus       128 ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609         128 NILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             HEEECCCCCEEEcccccceeecc
Confidence            99995 68899999999976643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.63  E-value=3e-15  Score=136.99  Aligned_cols=146  Identities=18%  Similarity=0.169  Sum_probs=105.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|....+        +..+|||.+........                        .......|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~~------------------------~~~~~~~e   49 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKAD--------QKLVIIKQIPVEQMTKD------------------------ERLAAQNE   49 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCC--------CcEEEEEEEeccccccH------------------------HHHHHHHH
Confidence            78899999999999999998555        89999999865321100                        01224568


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|+++.+.++. +...+. ....++||||+. .|.....+..   ..++...+..++.+++.+|.++| .+|++|+||
T Consensus        50 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl  127 (256)
T cd08220          50 CQVLKLLSHPNIIEYYENFLEDKALMIVMEYAP-GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH-TKLILHRDL  127 (256)
T ss_pred             HHHHhhCCCCchhheeeeEecCCEEEEEEecCC-CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCC
Confidence            8888888766532 222221 244689999995 3333222322   24777888899999999999999 599999999


Q ss_pred             CCCceEEeC--CeEEEEEccccccCCC
Q psy10135        192 SEYNMLVHK--ATLFIIDVAQSVEHDH  216 (351)
Q Consensus       192 kp~NILi~~--g~l~IIDFG~Av~~~~  216 (351)
                      +|.||++.+  +.++|+|||.+....+
T Consensus       128 ~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220         128 KTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             CHHHEEEcCCCCEEEEccCCCceecCC
Confidence            999999953  4689999999976543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.63  E-value=1.8e-15  Score=142.99  Aligned_cols=149  Identities=17%  Similarity=0.140  Sum_probs=100.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCccc--------ccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKI--------ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKM  108 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~--------~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~  108 (351)
                      |++.+.||.|+||.||+|........        ...+.+..+|+|+++....                         ..
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-------------------------~~   61 (296)
T cd05095           7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-------------------------KN   61 (296)
T ss_pred             ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-------------------------HH
Confidence            78999999999999999864210000        0001144689998865210                         00


Q ss_pred             HHHHHHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc------------CCCCHHHHHHHHHH
Q psy10135        109 VRTWAEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD------------TPLTESGACKLYRE  172 (351)
Q Consensus       109 vk~~aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~------------~~l~~~~~~~l~~q  172 (351)
                      .......|+..|.++.+.++  +..+.    ....++||||+. .|.....+..            ..++...+..++.|
T Consensus        62 ~~~~~~~E~~~l~~l~~~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (296)
T cd05095          62 ARNDFLKEIKIMSRLKDPNI--IRLLAVCITSDPLCMITEYME-NGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQ  138 (296)
T ss_pred             HHHHHHHHHHHHHhCCCCCc--ceEEEEEecCCccEEEEEeCC-CCcHHHHHHhcCcccccccccccccCHHHHHHHHHH
Confidence            11123468888888877653  23332    245689999995 3333222221            12455678899999


Q ss_pred             HHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        173 CVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       173 ll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ++.+|.+|| .+|++|+||||.|||+. ++.++|+|||.|...
T Consensus       139 i~~al~~lH-~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  180 (296)
T cd05095         139 IASGMKYLS-SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL  180 (296)
T ss_pred             HHHHHHHHH-HCCeecccCChheEEEcCCCCEEeccCcccccc
Confidence            999999999 59999999999999995 688999999998654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.63  E-value=1.3e-15  Score=140.55  Aligned_cols=138  Identities=14%  Similarity=0.117  Sum_probs=101.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.. .+        +..+|||+++.+...                           ......|
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~-~~--------~~~~~iK~~~~~~~~---------------------------~~~~~~e   49 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKW-RG--------KIDVAIKMIREGAMS---------------------------EDDFIEE   49 (256)
T ss_pred             cchhhhhccCCCceEEEeEe-cC--------CccEEEEEeccCCCC---------------------------HHHHHHH
Confidence            67889999999999999987 45        678999998643110                           0012347


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..++++.+.++.  +.+.    ....++||||+. +|.....+.  ...++...+..+..|++.++.+|| ..|++|+|
T Consensus        50 ~~~l~~l~~~~i~--~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~d  125 (256)
T cd05059          50 AKVMMKLSHPNLV--QLYGVCTKQRPIFIVTEYMA-NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE-SNGFIHRD  125 (256)
T ss_pred             HHHHHhCCCCCEE--EEEEEEcCCCceEEEEecCC-CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HCCccccc
Confidence            7888888766532  2221    134579999995 333333332  234677888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.||++. ++.++|+|||.+...
T Consensus       126 l~p~ni~i~~~~~~kl~dfg~~~~~  150 (256)
T cd05059         126 LAARNCLVGEDNVVKVSDFGLARYV  150 (256)
T ss_pred             ccHhhEEECCCCcEEECCcccceec
Confidence            999999995 688999999988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.63  E-value=2.2e-15  Score=140.77  Aligned_cols=142  Identities=19%  Similarity=0.223  Sum_probs=101.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++...||+|+||.||+|.+..+        ++.+|+|++......                           ......
T Consensus        17 ~~~~~~~lg~g~~~~v~~~~~~~~--------~~~~a~K~~~~~~~~---------------------------~~~~~~   61 (282)
T cd06636          17 IFELVEVVGNGTYGQVYKGRHVKT--------GQLAAIKVMDVTEDE---------------------------EEEIKL   61 (282)
T ss_pred             hhhhheeeccCCCeEEEEEEEcCC--------CcEEEEEEEecChHH---------------------------HHHHHH
Confidence            688899999999999999998666        899999997642100                           011234


Q ss_pred             HHHHHHHhh-hCCC-Cccccc-------cccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMY-SEGL-NVPKPI-------LLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~-~~gi-~vP~pi-------~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |...+.++. +.++ .....+       .....++||||++ .|.....+..   ..++...+..++.||+.+|.+|| .
T Consensus        62 e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH-~  139 (282)
T cd06636          62 EINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCG-AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH-A  139 (282)
T ss_pred             HHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCC-CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH-H
Confidence            666676663 3322 111111       1134579999996 4444333322   34677778889999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|++|+||+|.||++. ++.++|+|||.+...
T Consensus       140 ~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~  171 (282)
T cd06636         140 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  171 (282)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence            9999999999999995 588999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.63  E-value=3.3e-15  Score=140.46  Aligned_cols=139  Identities=18%  Similarity=0.178  Sum_probs=102.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||+|++|.||+|....+        |+.+|||++.....                           .......|
T Consensus        24 y~~~~~l~~g~~~~vy~~~~~~~--------~~~~aik~~~~~~~---------------------------~~~~~~~e   68 (291)
T cd06639          24 WEIIETIGKGTYGKVYKVTNKKD--------GSLAAVKILDPISD---------------------------VDEEIEAE   68 (291)
T ss_pred             eEEEEEeecCCCeEEEEEEECCC--------CCEEEEEEeccccc---------------------------HHHHHHHH
Confidence            89999999999999999998666        89999999864210                           01112457


Q ss_pred             HHHHHHh-hhCCCCcccccc---------ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRM-YSEGLNVPKPIL---------LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~---------~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      +..+.++ .+.++  +..+.         ....++||||++ +|.....+.     ...++...+..++.|++.+|.+||
T Consensus        69 ~~~l~~l~~h~ni--~~~~~~~~~~~~~~~~~~~lv~ey~~-~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  145 (291)
T cd06639          69 YNILQSLPNHPNV--VKFYGMFYKADKLVGGQLWLVLELCN-GGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH  145 (291)
T ss_pred             HHHHHHhcCCCCe--EEEEEEEEeccccCCCeeEEEEEECC-CCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            7778877 33332  22221         124689999995 333322221     235777888999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       .+|+||+||||.||++. ++.++|+|||.+...
T Consensus       146 -~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~  178 (291)
T cd06639         146 -NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL  178 (291)
T ss_pred             -hCCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence             59999999999999995 578999999998654

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=2.8e-15  Score=138.16  Aligned_cols=142  Identities=20%  Similarity=0.228  Sum_probs=104.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|++|.||+|.+..+        ++.+|+|+++....                           .......
T Consensus         7 ~y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~---------------------------~~~~~~~   51 (275)
T cd06608           7 IFELVEVIGEGTYGKVYKARHKKT--------GQLVAIKIMDIIED---------------------------EEEEIKE   51 (275)
T ss_pred             heeheeeecCCCCeEEEEEEECCC--------CcEEEEEEEecCch---------------------------hHHHHHH
Confidence            489999999999999999998555        88999999875321                           0112346


Q ss_pred             HHHHHHHhh-hCCC-Cccccccc-------cceEEEEcccCccccccccc---c--cCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMY-SEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKL---K--DTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL~-~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L---~--~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      |+..+.++. +.++ .+...+..       ...++||||+. +|.....+   .  ...++...+..++.|++.+|.+||
T Consensus        52 e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH  130 (275)
T cd06608          52 EYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCG-GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH  130 (275)
T ss_pred             HHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCC-CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            788888873 4432 22111111       22579999995 23222111   1  245788889999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|++|+||+|.||++. ++.++|+|||.+...
T Consensus       131 -~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608         131 -ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             -cCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence             59999999999999995 688999999998654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.63  E-value=1.7e-15  Score=140.88  Aligned_cols=147  Identities=20%  Similarity=0.127  Sum_probs=102.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.....   .....+..||||+++....                         ........+|
T Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~---~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~~e   58 (280)
T cd05049           7 IVLKRELGEGAFGKVFLGECYHL---EPENDKELVAVKTLKETAS-------------------------NDARKDFERE   58 (280)
T ss_pred             hhHHhhccccCCceEeeeeeccc---cCcCCcceEEEEeecccCC-------------------------HHHHHHHHHH
Confidence            67889999999999999976221   0011257899999864211                         0011233568


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc---------------cCCCCHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK---------------DTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~---------------~~~l~~~~~~~l~~qll~~L~~  179 (351)
                      +..|.++.+.++. ....+. ....++||||+. +|.....+.               ...++..++..+..|++.++.+
T Consensus        59 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~  137 (280)
T cd05049          59 AELLTNFQHENIVKFYGVCTEGDPPIMVFEYME-HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVY  137 (280)
T ss_pred             HHHHHhcCCCCchheeeEEecCCCeEEEEecCC-CCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence            8889888766532 111111 245689999995 332222221               1236677888999999999999


Q ss_pred             HHhhCCccccCCCCCceEE-eCCeEEEEEcccccc
Q psy10135        180 LYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~  213 (351)
                      || ..|++|+||||.|||+ .++.++|+|||.+..
T Consensus       138 lH-~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~  171 (280)
T cd05049         138 LA-SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRD  171 (280)
T ss_pred             Hh-hCCeeccccccceEEEcCCCeEEECCccccee
Confidence            99 5899999999999999 468999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.63  E-value=2.3e-15  Score=139.35  Aligned_cols=138  Identities=17%  Similarity=0.167  Sum_probs=102.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||.|.. ..        +..+|||.++.....                           ......|
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~-~~--------~~~~aik~~~~~~~~---------------------------~~~~~~e   49 (256)
T cd05113           6 LTFLKELGTGQFGVVKYGKW-RG--------QYDVAIKMIKEGSMS---------------------------EDEFIEE   49 (256)
T ss_pred             eEEeeEecCcccceEEEEEe-cC--------CCcEEEEEcCCCccc---------------------------HHHHHHH
Confidence            78889999999999999987 44        567999987653110                           0012357


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..+.++.+.+|  ++.+..    ...++||||+. .|.....+..  ..++...+..++.|++.+|.+|| ..|++|+|
T Consensus        50 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~d  125 (256)
T cd05113          50 AKVMMKLSHEKL--VQLYGVCTKQRPIYIVTEYMS-NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE-SKQFIHRD  125 (256)
T ss_pred             HHHHhcCCCCCe--eeEEEEEccCCCcEEEEEcCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccc
Confidence            888888876653  222222    33589999995 3433333332  25788888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.+...
T Consensus       126 l~p~nili~~~~~~kl~d~g~~~~~  150 (256)
T cd05113         126 LAARNCLVDDQGCVKVSDFGLSRYV  150 (256)
T ss_pred             cCcceEEEcCCCCEEECCCccceec
Confidence            999999995 578999999988643

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.63  E-value=2.1e-15  Score=143.39  Aligned_cols=143  Identities=18%  Similarity=0.123  Sum_probs=102.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCc----EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEK----EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~----~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      |++.+.||+|++|.||+|.+..+        |.    .+|+|+++....                       +  .....
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~--------~~~~~~~vaiK~~~~~~~-----------------------~--~~~~~   55 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPE--------GETVKIPVAIKILNETTG-----------------------P--KANVE   55 (303)
T ss_pred             ceeccccccCCCccEEEEEEecC--------CCcceeeEEEEeccccCC-----------------------H--HHHHH
Confidence            67888999999999999987444        44    578888764210                       0  01112


Q ss_pred             HHHHHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        113 AEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       113 aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ..+|...+.++.+.++ .....+.....+++|+|+. .|.....+..  ..++...+..++.|++.+|.+|| .+|++|+
T Consensus        56 ~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~-~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH-~~~ivH~  133 (303)
T cd05110          56 FMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMP-HGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE-ERRLVHR  133 (303)
T ss_pred             HHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcC-CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh-hcCeecc
Confidence            3467788888876653 2222222234568999996 4544443332  24677788899999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.+...
T Consensus       134 dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110         134 DLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             ccccceeeecCCCceEEccccccccc
Confidence            9999999995 588999999998643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0596|consensus

Probab=99.63  E-value=2.6e-16  Score=159.33  Aligned_cols=146  Identities=17%  Similarity=0.154  Sum_probs=104.7

Q ss_pred             hcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         32 SRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        32 ~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -+|-.|+|.+.||+||-+.||++.. .+        .+.||+|-..-     ...+      ..-..|            
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~-s~--------~~iyalkkv~~-----~~~D------~qtl~g------------  405 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLN-SD--------KQIYALKKVVL-----LEAD------NQTLDG------------  405 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeec-CC--------CcchhhhHHHH-----hhcC------HHHHHH------------
Confidence            3566799999999999999999988 55        56778774322     1111      001111            


Q ss_pred             HHHHHHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCC--CCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTP--LTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~--l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                       ...|+..|.+|... ..+...|++    +..+||||+=  +-.+...|+...  ++.-.++.++.||+.++.++|+ +|
T Consensus       406 -y~nEI~lL~KLkg~-~~IIqL~DYEv~d~~lYmvmE~G--d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~-~g  480 (677)
T KOG0596|consen  406 -YRNEIALLNKLKGH-DKIIQLYDYEVTDGYLYMVMECG--DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ-HG  480 (677)
T ss_pred             -HHHHHHHHHHhcCC-ceEEEEeeeeccCceEEEEeecc--cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH-hc
Confidence             23689999999765 344444443    4457999984  333444444432  3333667888899999999995 99


Q ss_pred             ccccCCCCCceEEeCCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVHKATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~~g~l~IIDFG~Av~~  214 (351)
                      |||.||||.|+|+-.|.++|||||.|..+
T Consensus       481 IVHSDLKPANFLlVkG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  481 IVHSDLKPANFLLVKGRLKLIDFGIANAI  509 (677)
T ss_pred             eeecCCCcccEEEEeeeEEeeeechhccc
Confidence            99999999999999999999999999543

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.63  E-value=2.5e-15  Score=141.19  Aligned_cols=152  Identities=18%  Similarity=0.151  Sum_probs=103.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcc--------cccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYK--------IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRK  107 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~--------~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~  107 (351)
                      -|++.+.||+|+||.||+|.......        ......+..||+|+++.....                         
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-------------------------   60 (296)
T cd05051           6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-------------------------   60 (296)
T ss_pred             hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-------------------------
Confidence            37889999999999999998733200        000112356899987653110                         


Q ss_pred             HHHHHHHHHHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccC------------CCCHHHHHHHHHHH
Q psy10135        108 MVRTWAEKEMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDT------------PLTESGACKLYREC  173 (351)
Q Consensus       108 ~vk~~aekE~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~------------~l~~~~~~~l~~ql  173 (351)
                      .......+|++.|.++.+.++ .+...+.. ...++||||+. .|.....+...            .++...+..++.|+
T Consensus        61 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  139 (296)
T cd05051          61 NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYME-NGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQI  139 (296)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCC-CCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHH
Confidence            011223568889999876653 22111111 45689999995 33332222221            46778889999999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| .+|++|+||||.||++. ++.++|+|||.+...
T Consensus       140 ~~al~~LH-~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  180 (296)
T cd05051         140 ASGMRYLE-SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL  180 (296)
T ss_pred             HHHHHHHH-HcCccccccchhceeecCCCceEEccccceeec
Confidence            99999999 59999999999999995 579999999998643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.63  E-value=2.8e-15  Score=130.18  Aligned_cols=154  Identities=18%  Similarity=0.199  Sum_probs=108.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.|+.|.++.||++.. .         |..|+||++.....      .                     ....++|+.++
T Consensus         4 ~~l~~G~~~~vy~~~~-~---------~~~~~lK~~~~~~~------~---------------------~~~~~~E~~~l   46 (170)
T cd05151           4 SPLKGGMTNKNYRVEV-A---------NKKYVVRIPGNGTE------L---------------------LINRENEAENS   46 (170)
T ss_pred             eecCCcccCceEEEEE-C---------CeEEEEEeCCCCcc------c---------------------ccCHHHHHHHH
Confidence            5789999999999986 3         67899999865321      0                     01124689999


Q ss_pred             HHhhhCCCCccccccccc--eEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCC-----ccccCCCC
Q psy10135        121 TRMYSEGLNVPKPILLKS--HVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH-----LVHADLSE  193 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~--~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~g-----lVH~DLkp  193 (351)
                      ..+...++ +|+++....  .++||||+  +|..+...   ..   ....++.+++.+|++||. .+     ++|+|++|
T Consensus        47 ~~l~~~~~-~P~~~~~~~~~~~lv~e~i--~G~~l~~~---~~---~~~~~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~  116 (170)
T cd05151          47 KLAAEAGI-GPKLYYFDPETGVLITEFI--EGSELLTE---DF---SDPENLEKIAKLLKKLHS-SPLPDLVPCHNDLLP  116 (170)
T ss_pred             HHHHHhCC-CCceEEEeCCCCeEEEEec--CCCccccc---cc---cCHHHHHHHHHHHHHHhC-CCCCCceeecCCCCc
Confidence            99987765 688886644  78999999  46543322   11   123567899999999994 76     49999999


Q ss_pred             CceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCC--cHHHHHHhhhh
Q psy10135        194 YNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD--DDEKIFKKWDS  252 (351)
Q Consensus       194 ~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~--~~~~~~~~~~~  252 (351)
                      .|||++++++++|||+.|... +      ...|+......|    .+.  ....+++.|..
T Consensus       117 ~Nil~~~~~~~liDf~~a~~~-~------~~~Dla~~~~~~----~~~~~~~~~~~~~y~~  166 (170)
T cd05151         117 GNFLLDDGRLWLIDWEYAGMN-D------PLFDLANFFSEA----KLSEDQEEELLEAYFG  166 (170)
T ss_pred             CcEEEECCeEEEEecccccCC-C------hHHHHHHHHHhc----CCCHHHHHHHHHHHhC
Confidence            999999889999999998532 2      345665554333    222  25666666653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0668|consensus

Probab=99.63  E-value=2.5e-16  Score=145.49  Aligned_cols=145  Identities=19%  Similarity=0.241  Sum_probs=105.6

Q ss_pred             hcCce--eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHH
Q psy10135         32 SRGMV--SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMV  109 (351)
Q Consensus        32 ~~g~~--y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~v  109 (351)
                      ..|.+  |+|.+.+|.|+++.||.|....+        ++.++||++++-.                             
T Consensus        33 ~wg~~ddYeivrk~GRGKYSEVFeg~~~~~--------~eK~ViKiLKPVk-----------------------------   75 (338)
T KOG0668|consen   33 DWGNQDDYEIVRKVGRGKYSEVFEGINITN--------NEKCVIKILKPVK-----------------------------   75 (338)
T ss_pred             eccccchHHHHHHHcCccHhhHhcccccCC--------CceEEEeeechHH-----------------------------
Confidence            34544  89999999999999999997556        8899999999721                             


Q ss_pred             HHHHHHHHHHHHHhhh-CC-CCccccc---cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        110 RTWAEKEMRNLTRMYS-EG-LNVPKPI---LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       110 k~~aekE~~nL~rL~~-~g-i~vP~pi---~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +.-..+|+.+|..|.. ++ |..-..+   ......|++||+.  ..-...|-. .|+..+++.+..+++.||.+|| +.
T Consensus        76 kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~--n~Dfk~ly~-tl~d~dIryY~~elLkALdyCH-S~  151 (338)
T KOG0668|consen   76 KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVN--NTDFKQLYP-TLTDYDIRYYIYELLKALDYCH-SM  151 (338)
T ss_pred             HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhc--cccHHHHhh-hhchhhHHHHHHHHHHHHhHHH-hc
Confidence            1123578888888863 22 1111111   1234569999994  332222221 3666788999999999999999 59


Q ss_pred             CccccCCCCCceEEeC--CeEEEEEccccccCCCCC
Q psy10135        185 HLVHADLSEYNMLVHK--ATLFIIDVAQSVEHDHPH  218 (351)
Q Consensus       185 glVH~DLkp~NILi~~--g~l~IIDFG~Av~~~~p~  218 (351)
                      ||.|||+||.|+||+.  .+++|||||+| +.-||.
T Consensus       152 GImHRDVKPhNvmIdh~~rkLrlIDWGLA-EFYHp~  186 (338)
T KOG0668|consen  152 GIMHRDVKPHNVMIDHELRKLRLIDWGLA-EFYHPG  186 (338)
T ss_pred             CcccccCCcceeeechhhceeeeeecchH-hhcCCC
Confidence            9999999999999953  68999999998 344554

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.63  E-value=2.5e-15  Score=140.69  Aligned_cols=143  Identities=19%  Similarity=0.210  Sum_probs=104.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +|++.+.||.|++|.||+|.+..+        +..+|+|.+.....  +                      ...  ....
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~--------~~~~~~k~~~~~~~--~----------------------~~~--~~~~   51 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKET--------GVLAAAKVIDTKSE--E----------------------ELE--DYMV   51 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCC--------CeEEEEEEeCCCCH--H----------------------HHH--HHHH
Confidence            478889999999999999998666        88999998854210  0                      000  1234


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..+..+.+.++. +...+. ....++||||++ +|.....+.  ..+++...+..++.|++.+|.+|| ..|++|+||
T Consensus        52 e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~-~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH-~~~i~H~dl  129 (282)
T cd06643          52 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCA-GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH-ENKIIHRDL  129 (282)
T ss_pred             HHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecCC
Confidence            77788888766532 221121 244689999995 333322222  345788889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       130 kp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643         130 KAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             CcccEEEccCCCEEEccccccccc
Confidence            99999995 688999999988543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.63  E-value=1.5e-15  Score=141.93  Aligned_cols=139  Identities=19%  Similarity=0.181  Sum_probs=99.7

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||.|+||.||+|.+..+        |+.||||++..+......                       .......|...|.+
T Consensus         1 lg~g~~g~vy~~~~~~~--------~~~~~ik~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~   49 (277)
T cd05577           1 LGKGGFGEVCACQVKAT--------GKMYACKKLDKKRLKKRK-----------------------GEQMALNEKKILEK   49 (277)
T ss_pred             CCCCCceeEEEEEEcCC--------CcEEEEEEEehhhhhhhh-----------------------hhHHHHHHHHHHHh
Confidence            68999999999988666        899999998753211110                       01122357888888


Q ss_pred             hhhCCC-Cccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        123 MYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       123 L~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      +.+.++ .....+.. ...++||||+. +|.....+..   ..++..++..+..|++.+|.+|| .+|++|+||+|.|||
T Consensus        50 l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~i~H~di~p~Nil  127 (277)
T cd05577          50 VSSRFIVSLAYAFETKDDLCLVMTLMN-GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH-QRRIVYRDLKPENVL  127 (277)
T ss_pred             CCCCCEeeeeeEEecCCeEEEEEecCC-CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEE
Confidence            876542 22222222 44689999995 3333223322   25788888899999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEccccccC
Q psy10135        198 VH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~~  214 (351)
                      +. ++.++|+|||.+...
T Consensus       128 ~~~~~~~~l~dfg~~~~~  145 (277)
T cd05577         128 LDDHGNVRISDLGLAVEL  145 (277)
T ss_pred             ECCCCCEEEccCcchhhh
Confidence            95 578999999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.63  E-value=3.1e-15  Score=141.79  Aligned_cols=142  Identities=18%  Similarity=0.203  Sum_probs=105.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|....+        +..||||.+.....  .                        .......|
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~--------~~~v~iK~~~~~~~--~------------------------~~~~~~~e   66 (293)
T cd06647          21 YTRFEKIGQGASGTVYTAIDVAT--------GQEVAIKQMNLQQQ--P------------------------KKELIINE   66 (293)
T ss_pred             ceeeeEecCCCCeEEEEEEEcCC--------CCEEEEEEeccccc--h------------------------HHHHHHHH
Confidence            88999999999999999987556        88999998753210  0                        01123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      ...++++.+.++. +...+. ....++||||+. +|.....+....++..++..++.+++.+|.+|| ..|++|+||+|.
T Consensus        67 ~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH-~~gi~H~dL~p~  144 (293)
T cd06647          67 ILVMRENKHPNIVNYLDSYLVGDELWVVMEYLA-GGSLTDVVTETCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSD  144 (293)
T ss_pred             HHHHhhcCCCCeeehhheeeeCCcEEEEEecCC-CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCEeeccCCHH
Confidence            7778888766532 221221 245689999995 344433344456778888999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||++. ++.++|+|||.+...
T Consensus       145 Nili~~~~~~kL~dfg~~~~~  165 (293)
T cd06647         145 NILLGMDGSVKLTDFGFCAQI  165 (293)
T ss_pred             HEEEcCCCCEEEccCcceecc
Confidence            99995 578999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.63  E-value=3.6e-15  Score=144.70  Aligned_cols=143  Identities=18%  Similarity=0.229  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |+.||||+++....   . .                    .......+
T Consensus        16 ~y~~~~~ig~g~~g~v~~~~~~~~--------~~~vaiK~~~~~~~---~-~--------------------~~~~~~~~   63 (342)
T cd07879          16 RYTSLKQVGSGAYGSVCSAIDKRT--------GEKVAIKKLSRPFQ---S-E--------------------IFAKRAYR   63 (342)
T ss_pred             ceEEEEEeeecCCeEEEEEEeCCC--------CcEEEEEEecCccc---c-c--------------------cchhHHHH
Confidence            488999999999999999998556        89999998764210   0 0                    00112346


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|.++.+.++ +....+.       ....++||||++  + .+..+....++...+..++.|++.+|.+|| ..|++
T Consensus        64 e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~i~  139 (342)
T cd07879          64 ELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ--T-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIH-SAGII  139 (342)
T ss_pred             HHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc--c-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcc
Confidence            7888888876653 2222221       123589999994  3 222333346788888999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.+...
T Consensus       140 H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879         140 HRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             cCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            999999999995 689999999998654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.63  E-value=2.6e-15  Score=140.10  Aligned_cols=144  Identities=15%  Similarity=0.118  Sum_probs=104.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |..||||+++.....    ..                    .......|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~--------~~~~~ik~~~~~~~~----~~--------------------~~~~~~~E   48 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLT--------GEIVALKKIRLETED----EG--------------------VPSTAIRE   48 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCC--------CCEEEEEEeeccccc----cc--------------------chhHHHHH
Confidence            67889999999999999998666        999999998753110    00                    00112347


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.++ .+...+. ....++||||++  +.....+..   ..++...+..++.|++.+|.+|| ..|++|+||
T Consensus        49 ~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH-~~~~~H~dl  125 (283)
T cd07835          49 ISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD--LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH-SHRVLHRDL  125 (283)
T ss_pred             HHHHHhcCCCCccCHhheeccCCeEEEEEeccC--cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCC
Confidence            778888876542 2221111 245689999994  433333322   24788889999999999999999 489999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.||++. ++.++|+|||.+...+
T Consensus       126 ~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835         126 KPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             CHHHEEEcCCCcEEEeecccccccC
Confidence            99999994 6889999999987554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.63  E-value=2.9e-15  Score=137.73  Aligned_cols=143  Identities=20%  Similarity=0.166  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|....+        +..+|||++......-                         ......+|
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~-------------------------~~~~~~~e   49 (267)
T cd06610           3 YELIEVIGVGATAVVYAAICLPN--------NEKVAIKRIDLEKCQT-------------------------SVDELRKE   49 (267)
T ss_pred             ceeeeeecCCCCeEEEEEEEcCC--------CcEEEEEEeccCCcch-------------------------HHHHHHHH
Confidence            78899999999999999997555        8899999986421100                         01123467


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|+++.+.++  +..+.    ....++||||+. +|.....+..    ..++...+..++.|++.+|..|| .+|++|
T Consensus        50 ~~~l~~l~~~~i--~~~~~~~~~~~~~~iv~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh-~~~i~h  125 (267)
T cd06610          50 VQAMSQCNHPNV--VKYYTSFVVGDELWLVMPYLS-GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH-SNGQIH  125 (267)
T ss_pred             HHHHHhcCCCCE--EEEEEEEeeCCEEEEEEeccC-CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence            778888876553  22221    244579999995 3333322322    34778888999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      +||+|.||++. ++.++|+|||.+.....
T Consensus       126 ~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610         126 RDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             CCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            99999999995 57899999999865543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0589|consensus

Probab=99.63  E-value=3.6e-16  Score=156.51  Aligned_cols=149  Identities=15%  Similarity=0.163  Sum_probs=116.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.++.+.+..+        +..||||.++....+-+                        .+..|.+
T Consensus         5 ~Ye~~~~iG~GafG~a~lvrhk~~--------~~~~vlK~I~l~~~t~~------------------------~r~~A~~   52 (426)
T KOG0589|consen    5 NYEVLRQVGRGAFGSALLVRHKSD--------DKLYVLKKINLEKLTEP------------------------ERRSAIQ   52 (426)
T ss_pred             hhhhhhhcCccccchhhhhhhccC--------CceEEEEEEeccccCch------------------------hhHHHHH
Confidence            488899999999999999998666        88999999886432211                        1225788


Q ss_pred             HHHHHHHhhhCC-CCcccccccc-c-eEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEG-LNVPKPILLK-S-HVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~g-i~vP~pi~~~-~-~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..+.++.+.. |.-++.+..+ . .+|||+|+. +|..+..++.   .-++++.+..++.|++.++.+|| +.+|+||
T Consensus        53 E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~e-Gg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH-~~~iLHR  130 (426)
T KOG0589|consen   53 EMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCE-GGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH-ENRVLHR  130 (426)
T ss_pred             HHHHHHhccCCCeeeeccchhcCCceEEEEEeecC-CCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-hhhhhcc
Confidence            999999987765 3444444333 3 579999995 4554444443   34788999999999999999999 6999999


Q ss_pred             CCCCCceEE-eCCeEEEEEccccccCCCCC
Q psy10135        190 DLSEYNMLV-HKATLFIIDVAQSVEHDHPH  218 (351)
Q Consensus       190 DLkp~NILi-~~g~l~IIDFG~Av~~~~p~  218 (351)
                      |||+.||++ .++.++|-|||.|.....+.
T Consensus       131 DlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen  131 DLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             cchhhhhhccccCceeecchhhhhhcCCch
Confidence            999999999 57889999999998776554

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.63  E-value=1.7e-15  Score=145.10  Aligned_cols=145  Identities=18%  Similarity=0.172  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|....+        |..||||.+.......                        .......+|
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~~------------------------~~~~~~~~e   49 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRT--------GRKVAIKKISNVFDDL------------------------IDAKRILRE   49 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCC--------CcEEEEEeeccccccc------------------------hhhhhHHHH
Confidence            78899999999999999998555        8999999887521100                        001123457


Q ss_pred             HHHHHHhhhCCC-Cccccccc------cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL------KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|+.+.+.++ .+...+..      ...++||+|++  +.....+.. ..++...+..++.+|+.+|.+|| ..||+|
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH-~~gi~H  126 (330)
T cd07834          50 IKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME--TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLH-SANVIH  126 (330)
T ss_pred             HHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh--hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence            778888766552 22222111      24589999995  333233333 36788888999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      +||||.|||+. ++.++|+|||.+.....
T Consensus       127 ~dlkp~nili~~~~~~~L~dfg~~~~~~~  155 (330)
T cd07834         127 RDLKPSNILVNSNCDLKICDFGLARGVDP  155 (330)
T ss_pred             CCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence            99999999995 58999999999876544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.62  E-value=2.3e-15  Score=145.51  Aligned_cols=145  Identities=15%  Similarity=0.125  Sum_probs=107.3

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      --|++.+.||.|++|.||+|.+..+        |..||||++.......                        .......
T Consensus        10 ~~y~~~~~ig~g~~g~v~~~~~~~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~~   57 (328)
T cd07856          10 NRYVDLQPVGMGAFGLVCSARDQLT--------GQNVAIKKIMKPFSTP------------------------VLAKRTY   57 (328)
T ss_pred             cceEEEEeecccCCeEEEEEEECCC--------CCEEEEEEeccccccc------------------------chhHHHH
Confidence            3499999999999999999998666        9999999876421100                        0011123


Q ss_pred             HHHHHHHHhhhCCC-Cccccccc--cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPILL--KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      .|...|.++.+.++ ++...+..  ...++||||++  +.....++...++...+..+..|++.+|.+|| ..|++|+||
T Consensus        58 ~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH-~~~iiH~dl  134 (328)
T cd07856          58 RELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG--TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVH-SAGVVHRDL  134 (328)
T ss_pred             HHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc--cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCC
Confidence            58888888877653 33333222  34579999995  43333344456777778889999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.|||+. ++.++|+|||.+...
T Consensus       135 ~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856         135 KPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             CHHHEeECCCCCEEeCcccccccc
Confidence            99999995 578999999998654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.62  E-value=2.2e-15  Score=145.79  Aligned_cols=144  Identities=13%  Similarity=0.113  Sum_probs=105.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |..||||.++.......                        .......
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~--------~~~vaiK~~~~~~~~~~------------------------~~~~~~~   53 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSET--------NEKVAIKKIANAFDNRI------------------------DAKRTLR   53 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCC--------CCeEEEEEecccccccc------------------------hhHHHHH
Confidence            488999999999999999998666        89999998765211000                        0112245


Q ss_pred             HHHHHHHhhhCCCC-cccccc------ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL------LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~------~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|.++.+.++. +...+.      ....+|||||++  +.....+.. ..++...+..++.|++.+|.+|| ..|++
T Consensus        54 E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~i~  130 (337)
T cd07858          54 EIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD--TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH-SANVL  130 (337)
T ss_pred             HHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC--CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCEe
Confidence            78888888665532 111111      123589999995  433333322 45888889999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+||||.|||+. ++.++|+|||.|...
T Consensus       131 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  158 (337)
T cd07858         131 HRDLKPSNLLLNANCDLKICDFGLARTT  158 (337)
T ss_pred             cCCCCHHHEEEcCCCCEEECcCcccccc
Confidence            999999999995 688999999998754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1165|consensus

Probab=99.62  E-value=1.3e-15  Score=146.83  Aligned_cols=148  Identities=16%  Similarity=0.175  Sum_probs=109.5

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      .|.-|.|++.||+|+||.+|.|...-+        +++||||.-.......           .                 
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~n--------ne~VAIKfEPrkS~AP-----------Q-----------------   69 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYN--------NEPVAIKFEPRKSEAP-----------Q-----------------   69 (449)
T ss_pred             ecccceeccccccCcceeeeccccccc--------CceEEEEeccccCCcc-----------h-----------------
Confidence            466799999999999999999988666        9999999754311100           0                 


Q ss_pred             HHHHHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        113 AEKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ..-|++.-+-|.. +.-+|.++..    ..++||||++|....-+-.+-.-.++...+..++.|++.-|+++| ...||-
T Consensus        70 LrdEYr~YKlL~g-~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH-~k~LIY  147 (449)
T KOG1165|consen   70 LRDEYRTYKLLGG-TEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH-EKDLIY  147 (449)
T ss_pred             HHHHHHHHHHHcC-CCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH-hcceee
Confidence            1247777776653 2346777654    346799999962222222233346899999999999999999999 589999


Q ss_pred             cCCCCCceEEe------CCeEEEEEccccccCCCCC
Q psy10135        189 ADLSEYNMLVH------KATLFIIDVAQSVEHDHPH  218 (351)
Q Consensus       189 ~DLkp~NILi~------~g~l~IIDFG~Av~~~~p~  218 (351)
                      |||||+|+||.      .+.++|||||+|.+...|.
T Consensus       148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  148 RDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             cccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            99999999993      2469999999998764443

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.62  E-value=1.7e-15  Score=165.27  Aligned_cols=145  Identities=17%  Similarity=0.157  Sum_probs=105.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|.+.||.|+||.||+|.+..+        +..+|+|++........                        .......|
T Consensus        15 YeIl~kLG~GgFGtVYLAkdk~t--------g~~vAlKvIk~~~l~e~------------------------~~~~~~~E   62 (1021)
T PTZ00266         15 YEVIKKIGNGRFGEVFLVKHKRT--------QEFFCWKAISYRGLKER------------------------EKSQLVIE   62 (1021)
T ss_pred             EEEEEEEecCCCeEEEEEEECCC--------CeEEEEEEEeccccCHH------------------------HHHHHHHH
Confidence            89999999999999999998666        88999999875321100                        01123458


Q ss_pred             HHHHHHhhhCCC-Cccccccc---cceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhh----
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNK----  183 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~----  183 (351)
                      +..|.+|.+.+| .+...+..   ...+|||||+. .|.+...|..     ..++...+..++.||+.+|.+||..    
T Consensus        63 I~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~-gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~  141 (1021)
T PTZ00266         63 VNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCD-AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGP  141 (1021)
T ss_pred             HHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCC-CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccccc
Confidence            899999987653 22222211   23579999995 4444333332     3588888999999999999999941    


Q ss_pred             --CCccccCCCCCceEEeC------------------CeEEEEEccccccC
Q psy10135        184 --CHLVHADLSEYNMLVHK------------------ATLFIIDVAQSVEH  214 (351)
Q Consensus       184 --~glVH~DLkp~NILi~~------------------g~l~IIDFG~Av~~  214 (351)
                        .+|||+||||.|||+..                  +.++|+|||+|...
T Consensus       142 ~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l  192 (1021)
T PTZ00266        142 NGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNI  192 (1021)
T ss_pred             ccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccc
Confidence              24999999999999953                  23899999988654

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.62  E-value=4.3e-15  Score=137.67  Aligned_cols=147  Identities=17%  Similarity=0.154  Sum_probs=103.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.....     ......||||+++.....                         ..+.....|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~-----~~~~~~vaik~~~~~~~~-------------------------~~~~~~~~e   55 (266)
T cd05033           6 VTIEKVIGGGEFGEVCRGRLKLP-----GKKEIDVAIKTLKAGSSD-------------------------KQRLDFLTE   55 (266)
T ss_pred             ceeeeEecCCccceEEEEEEccC-----CCCcceEEEEEcCCCCCh-------------------------HHHHHHHHH
Confidence            78899999999999999987321     011457999988652100                         011112457


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++.+.++ ++...+. ....++||||+. +|.....+..  ..++...+..++.+++.++.+|| ..|++|+|||
T Consensus        56 ~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh-~~~i~H~di~  133 (266)
T cd05033          56 ASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME-NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS-EMNYVHRDLA  133 (266)
T ss_pred             HHHHHhCCCCCcceEeEEEecCCceEEEEEcCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCC
Confidence            888888876553 2221111 244589999995 3333222322  35788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+. ++.++|+|||.+....
T Consensus       134 p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033         134 ARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             cceEEEcCCCCEEECccchhhccc
Confidence            9999995 5789999999987653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.62  E-value=2.9e-15  Score=149.97  Aligned_cols=53  Identities=23%  Similarity=0.139  Sum_probs=46.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        161 LTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       161 l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ++..++..++.||+.+|.+|| ..||||+||||.|||+. ++.++|+|||.+...
T Consensus       234 l~~~~~~~~~~qi~~aL~~LH-~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~  287 (400)
T cd05105         234 LTTLDLLSFTYQVARGMEFLA-SKNCVHRDLAARNVLLAQGKIVKICDFGLARDI  287 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChHhEEEeCCCEEEEEeCCcceec
Confidence            555667789999999999999 59999999999999995 578999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.62  E-value=2.5e-15  Score=142.61  Aligned_cols=151  Identities=13%  Similarity=0.103  Sum_probs=91.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH---H
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT---W  112 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~---~  112 (351)
                      -|.|.+.||+|+||.||+|....+     ...+..+|+|+.......+...                  ...+...   .
T Consensus        13 ~y~i~~~LG~G~fG~Vy~~~~~~~-----~~~~~~~~~k~~~~~~~~~~~e------------------~~~~~~~~~~~   69 (294)
T PHA02882         13 EWKIDKLIGCGGFGCVYETQCASD-----HCINNQAVAKIENLENETIVME------------------TLVYNNIYDID   69 (294)
T ss_pred             ceEEeeEEecCCCceEEEEEEcCC-----cccccceEEEeccccCCchhhH------------------HHHHHhhhhHH
Confidence            499999999999999999987321     0013467777643211111000                  0000000   0


Q ss_pred             HHHHHHHHHHhhhCCCCccccccc--------cceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        113 AEKEMRNLTRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ...++..+..+.+.+  +|..+..        ...+++|++++...  ...+... ..+...+..++.|++.+|.+|| .
T Consensus        70 ~~~~~~~~~~~~h~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~  144 (294)
T PHA02882         70 KIALWKNIHNIDHLG--IPKYYGCGSFKRCRMYYRFILLEKLVENT--KEIFKRIKCKNKKLIKNIMKDMLTTLEYIH-E  144 (294)
T ss_pred             HHHHHHHhccCCCCC--CCcEEEeeeEecCCceEEEEEEehhccCH--HHHHHhhccCCHHHHHHHHHHHHHHHHHHH-h
Confidence            112223333333333  3333322        12367888874221  1112221 2466778899999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|+|||||||.|||++ ++.++|+|||.|...
T Consensus       145 ~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~  176 (294)
T PHA02882        145 HGISHGDIKPENIMVDGNNRGYIIDYGIASHF  176 (294)
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEEEcCCceee
Confidence            8999999999999995 588999999998654

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.62  E-value=2.6e-15  Score=138.81  Aligned_cols=145  Identities=14%  Similarity=0.161  Sum_probs=103.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|....+        |..+|||.+......  +                   .  ........|
T Consensus         4 y~~~~~ig~g~~g~v~~~~~~~~--------~~~~~vK~~~~~~~~--~-------------------~--~~~~~~~~e   52 (267)
T cd08229           4 FRIEKKIGRGQFSEVYRATCLLD--------GVPVALKKVQIFDLM--D-------------------A--KARADCIKE   52 (267)
T ss_pred             hhhhhhhcccCCeEEEEEeecCC--------CceEEEEeeeehhhh--h-------------------H--HHHHHHHHH
Confidence            67889999999999999998566        899999987642110  0                   0  011123467


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..++.+.+.++ ++...+. ....++||||+. .|.....+.     ...++...+..++.+|+.+|.+|| ..|++|+
T Consensus        53 ~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~  130 (267)
T cd08229          53 IDLLKQLNHPNVIKYYASFIEDNELNIVLELAD-AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH-SRRVMHR  130 (267)
T ss_pred             HHHHHHccCCchhhhhheeEeCCeEEEEEEecC-CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecC
Confidence            888888876553 2222221 234579999995 233222222     234677888999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+|.||++. ++.++|+|||.+...
T Consensus       131 dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229         131 DIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCCHHHEEEcCCCCEEECcchhhhcc
Confidence            9999999995 588999999987543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.62  E-value=4.6e-15  Score=134.54  Aligned_cols=146  Identities=18%  Similarity=0.136  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||+|++|.||+|....+        |..++||+++.....                        ........+|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~------------------------~~~~~~~~~e   49 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDT--------GELMAVKSVELSGDS------------------------EEELEALERE   49 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCC--------CcEEEEEEeeccccc------------------------hHHHHHHHHH
Confidence            67789999999999999998556        899999998763211                        0011234568


Q ss_pred             HHHHHHhhhCCCC-ccccccc---cceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL---KSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~---~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.++. +......   ...++||||+. ++.....+... .++..++..++.+++.+|.+|| +.|++|+||
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~~~h~dl  127 (260)
T cd06606          50 IRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS-GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLH-SNGIVHRDI  127 (260)
T ss_pred             HHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCC
Confidence            8899999866532 2112212   34579999994 23322223322 6788888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      +|.||++. ++.++|+|||.+.....
T Consensus       128 ~p~ni~i~~~~~~~l~d~~~~~~~~~  153 (260)
T cd06606         128 KGANILVDSDGVVKLADFGCAKRLGD  153 (260)
T ss_pred             CHHHEEEcCCCCEEEcccccEEeccc
Confidence            99999996 58999999999876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.62  E-value=2.4e-15  Score=140.94  Aligned_cols=144  Identities=13%  Similarity=0.078  Sum_probs=102.1

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.+.||.|++|.||++.+..+        |+.||||.++.....                         .......+|.
T Consensus         7 ~~~~~lg~G~~g~vy~~~~~~~--------~~~~aiK~~~~~~~~-------------------------~~~~~~~~e~   53 (288)
T cd06616           7 KDLGEIGRGAFGTVNKMLHKPS--------GTIMAVKRIRSTVDE-------------------------KEQKRLLMDL   53 (288)
T ss_pred             HHHHHhCCCCceEEEEEEECCC--------CCEEEEEEehhccCh-------------------------HHHHHHHHHH
Confidence            4567899999999999998666        899999988652110                         1112234677


Q ss_pred             HHHHHhh-hCCC-Ccccccc-ccceEEEEcccCccccccccc----ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        118 RNLTRMY-SEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKL----KDTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       118 ~nL~rL~-~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L----~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ..+.++. +.++ .+...+. ....+++|||++.....+...    ....++...+..++.+++.+|.+||+.+|++|||
T Consensus        54 ~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~d  133 (288)
T cd06616          54 DVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRD  133 (288)
T ss_pred             HHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccC
Confidence            7888885 4432 2222221 245679999995222111111    1245788889999999999999999657999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       134 lkp~Nil~~~~~~~kl~dfg~~~~~  158 (288)
T cd06616         134 VKPSNILLDRNGNIKLCDFGISGQL  158 (288)
T ss_pred             CCHHHEEEccCCcEEEeecchhHHh
Confidence            999999995 678999999998643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.62  E-value=4.4e-15  Score=139.81  Aligned_cols=143  Identities=15%  Similarity=0.102  Sum_probs=102.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|.+|.||+|.+..+        |+.||||.++......                        ........|
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~~------------------------~~~~~~~~e   51 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDRVT--------NETIALKKIRLEQEDE------------------------GVPSTAIRE   51 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEecCC--------CcEEEEEehhhccccc------------------------cchHHHHHH
Confidence            78899999999999999998556        8999999876432100                        000112357


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..++++.+.++ ++...+. ....++||||++  +.....+..   ..++...+..++.||+.+|.+|| ..|++|+||
T Consensus        52 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~i~H~dl  128 (294)
T PLN00009         52 ISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD--LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH-SHRVLHRDL  128 (294)
T ss_pred             HHHHHhccCCCEeeEEEEEecCCeEEEEEeccc--ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH-hCCeeCCCC
Confidence            888888876653 2222221 245689999995  433333322   12466677889999999999999 589999999


Q ss_pred             CCCceEEe--CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      +|.||++.  ++.++|+|||.+...
T Consensus       129 ~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009        129 KPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             CcceEEEECCCCEEEEccccccccc
Confidence            99999996  357999999998644

>KOG1187|consensus

Probab=99.62  E-value=1.9e-15  Score=149.85  Aligned_cols=140  Identities=17%  Similarity=0.182  Sum_probs=105.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.-...||.|+||.||+|.. .+        |..||||.+......                       . ...  ...|
T Consensus        77 Fs~~~~ig~Ggfg~VYkG~l-~~--------~~~vAVK~~~~~~~~-----------------------~-~~e--F~~E  121 (361)
T KOG1187|consen   77 FSESNLIGEGGFGTVYKGVL-SD--------GTVVAVKRLSSNSGQ-----------------------G-ERE--FLNE  121 (361)
T ss_pred             CchhcceecCCCeEEEEEEE-CC--------CCEEEEEEecCCCCc-----------------------c-hhH--HHHH
Confidence            44457999999999999998 66        789999976542110                       0 001  3468


Q ss_pred             HHHHHHhhhCCCCccccccc----c-ceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCC--c
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----K-SHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCH--L  186 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~-~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~g--l  186 (351)
                      +.+|.++++.++  -..+.+    . ..+||.||+. +|.+...|...   +|+...-..|+..++.+|.+||..+.  |
T Consensus       122 i~~ls~l~H~Nl--v~LlGyC~e~~~~~~LVYEym~-nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~i  198 (361)
T KOG1187|consen  122 VEILSRLRHPNL--VKLLGYCLEGGEHRLLVYEYMP-NGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPI  198 (361)
T ss_pred             HHHHhcCCCcCc--ccEEEEEecCCceEEEEEEccC-CCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCE
Confidence            888888876653  122222    3 3799999998 67665665532   56777888999999999999997675  9


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||.|||++ +..++|.|||+|...
T Consensus       199 iHrDiKssNILLD~~~~aKlsDFGLa~~~  227 (361)
T KOG1187|consen  199 IHRDIKSSNILLDEDFNAKLSDFGLAKLG  227 (361)
T ss_pred             ecCCCCHHHeeECCCCCEEccCccCcccC
Confidence            9999999999996 679999999999544

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.62  E-value=5.4e-15  Score=135.10  Aligned_cols=145  Identities=16%  Similarity=0.151  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |..+|||.++......                        ........|
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~------------------------~~~~~~~~e   49 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSD--------NQFYALKEVDLGSMSQ------------------------KEREDAVNE   49 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCC--------CCEEEEEEEehhhccH------------------------HHHHHHHHH
Confidence            78899999999999999988566        8999999987532110                        112233457


Q ss_pred             HHHHHHhhhCCCCc-cccc-cccceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNV-PKPI-LLKSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi-~~~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..++++.+.++.. ...+ .....++||||++ .+.....+..     ..++...+..++.+++.+|.+|| ..|++|+
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh-~~~i~h~  127 (256)
T cd08530          50 IRILASVNHPNIISYKEAFLDGNKLCIVMEYAP-FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH-EQKILHR  127 (256)
T ss_pred             HHHHHhCCCCCchhhhhhhccCCEEEEEehhcC-CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh-hCCcccC
Confidence            88888887655321 1121 1245689999994 2222222222     34777888899999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||+|.||++. ++.++|+|||.+....
T Consensus       128 ~l~~~ni~~~~~~~~kl~d~g~~~~~~  154 (256)
T cd08530         128 DLKSANILLVANDLVKIGDLGISKVLK  154 (256)
T ss_pred             CCCcceEEEecCCcEEEeeccchhhhc
Confidence            9999999995 5789999999886543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.62  E-value=3e-15  Score=138.95  Aligned_cols=144  Identities=15%  Similarity=0.131  Sum_probs=105.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||+|.+|.||+|....+        ++.||+|+++....    ..       ++             ......|
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~--------~~~~~iK~~~~~~~----~~-------~~-------------~~~~~~e   48 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKT--------GEIVALKKIRLDNE----EE-------GI-------------PSTALRE   48 (282)
T ss_pred             CeeehcccccCcceEEEeeecCC--------CcEEEEEEeccccc----cc-------cc-------------cHHHHHH
Confidence            57789999999999999998666        89999999986420    00       00             0112346


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..++++.+.++. +...+. ....++||||++  +.....+..  ..++...+..++.+++.+|.+|| ..|++|+||+
T Consensus        49 ~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~--~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~~l~  125 (282)
T cd07829          49 ISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD--MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH-SHRILHRDLK  125 (282)
T ss_pred             HHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC--cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCC
Confidence            7777777655432 111111 245689999995  433333333  25888889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.||++. ++.++|+|||.+....
T Consensus       126 ~~ni~~~~~~~~~l~d~g~~~~~~  149 (282)
T cd07829         126 PQNILINRDGVLKLADFGLARAFG  149 (282)
T ss_pred             hheEEEcCCCCEEEecCCcccccC
Confidence            9999995 5889999999986553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.62  E-value=3.6e-15  Score=144.71  Aligned_cols=144  Identities=18%  Similarity=0.174  Sum_probs=105.7

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      +.-|.+.+.||.|++|.||+|.+..+        |..||||++.....  .                        .....
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~--------~~~v~iK~i~~~~~--~------------------------~~~~~   49 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDC--------DKRVAVKKIVLTDP--Q------------------------SVKHA   49 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCC--------CcEEEEEEEecCCC--c------------------------hHHHH
Confidence            34589999999999999999998666        89999998865321  0                        01123


Q ss_pred             HHHHHHHHHhhhCCC-Ccccccc---------------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHH
Q psy10135        114 EKEMRNLTRMYSEGL-NVPKPIL---------------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMM  177 (351)
Q Consensus       114 ekE~~nL~rL~~~gi-~vP~pi~---------------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L  177 (351)
                      .+|+..|+++.+.++ ++...+.               ....++||||++  +.....+....++...+..++.||+.+|
T Consensus        50 ~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~l~~~~~~~~~~qi~~aL  127 (342)
T cd07854          50 LREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME--TDLANVLEQGPLSEEHARLFMYQLLRGL  127 (342)
T ss_pred             HHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc--ccHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            457778887765542 1211111               123579999995  4333334445688889999999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      .+|| ..|+||+||||.||++.  ++.++|+|||.+...
T Consensus       128 ~~LH-~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~  165 (342)
T cd07854         128 KYIH-SANVLHRDLKPANVFINTEDLVLKIGDFGLARIV  165 (342)
T ss_pred             HHHH-hCCcccCCCCHHHEEEcCCCceEEECCcccceec
Confidence            9999 59999999999999995  357899999988643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.62  E-value=2.5e-15  Score=138.51  Aligned_cols=142  Identities=18%  Similarity=0.182  Sum_probs=104.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        ++.+|+|++......                         .......+|
T Consensus         3 ~~~~~~ig~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~-------------------------~~~~~~~~e   49 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVLHRPT--------GKIMAVKTIRLEINE-------------------------AIQKQILRE   49 (265)
T ss_pred             chHHHHhcCCCCeEEEEEEEcCC--------CcEEEEEEEecccCh-------------------------HHHHHHHHH
Confidence            56778999999999999998666        899999988753211                         111223467


Q ss_pred             HHHHHHhhhCCC-Cccccc-cccceEEEEcccCcccccccc-ccc--CCCCHHHHHHHHHHHHHHHHHHHhh-CCccccC
Q psy10135        117 MRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAK-LKD--TPLTESGACKLYRECVVMMWRLYNK-CHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~-L~~--~~l~~~~~~~l~~qll~~L~~LH~~-~glVH~D  190 (351)
                      +..++++.+.++ ++...+ .....+|||||++  |..+.. +..  ..++...+..+..|++.+|.+|| . .|++|+|
T Consensus        50 ~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~~i~H~d  126 (265)
T cd06605          50 LDILHKCNSPYIVGFYGAFYNNGDISICMEYMD--GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH-EKHKIIHRD  126 (265)
T ss_pred             HHHHHHCCCCchhhhheeeecCCEEEEEEEecC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc-CCCCeecCC
Confidence            888888875543 222222 1245679999995  333332 222  45778888899999999999999 6 8999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.||++. ++.++|+|||.+...
T Consensus       127 l~~~ni~~~~~~~~~l~d~g~~~~~  151 (265)
T cd06605         127 VKPSNILVNSRGQIKLCDFGVSGQL  151 (265)
T ss_pred             CCHHHEEECCCCCEEEeecccchhh
Confidence            999999995 578999999998644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.62  E-value=4.1e-15  Score=140.85  Aligned_cols=142  Identities=18%  Similarity=0.126  Sum_probs=99.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCc--EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEK--EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~--~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |++.+.||.|++|.||+|....+        |.  .+|+|.++.....                         .......
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~--------~~~~~~~ik~~~~~~~~-------------------------~~~~~~~   50 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKD--------GLKMNAAIKMLKEFASE-------------------------NDHRDFA   50 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCC--------CCcceeEEEEccccCCH-------------------------HHHHHHH
Confidence            78899999999999999987443        43  5788887642100                         0011234


Q ss_pred             HHHHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHH
Q psy10135        115 KEMRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECV  174 (351)
Q Consensus       115 kE~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll  174 (351)
                      .|+..+.++ .+.++ ++...+. ....++||||+. .|.....+..                 ..++...+..++.|++
T Consensus        51 ~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~  129 (297)
T cd05089          51 GELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP-YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA  129 (297)
T ss_pred             HHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC-CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHH
Confidence            578888888 34442 2211111 234689999995 3433222221                 1366778889999999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .+|.+|| .+|+||+||||.|||+. ++.++|+|||.+..
T Consensus       130 ~al~~lH-~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  168 (297)
T cd05089         130 TGMQYLS-EKQFIHRDLAARNVLVGENLASKIADFGLSRG  168 (297)
T ss_pred             HHHHHHH-HCCcccCcCCcceEEECCCCeEEECCcCCCcc
Confidence            9999999 59999999999999995 57899999998853

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.62  E-value=3.6e-15  Score=139.99  Aligned_cols=142  Identities=15%  Similarity=0.072  Sum_probs=97.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCc----EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEK----EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~----~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      |++.+.||.|+||.||+|....+        |.    .+|+|.+....           +             + .....
T Consensus         9 ~~~~~~lg~G~~~~vy~~~~~~~--------~~~~~~~~~~k~~~~~~-----------~-------------~-~~~~~   55 (279)
T cd05111           9 LRKLKLLGSGVFGTVHKGIWIPE--------GDSIKIPVAIKTIQDRS-----------G-------------R-QTFQE   55 (279)
T ss_pred             ceeccccCccCCcceEEEEEcCC--------CCceeeEEEEeeccccc-----------c-------------h-HHHHH
Confidence            67889999999999999987444        55    46666653210           0             0 00112


Q ss_pred             HHHHHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        113 AEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       113 aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ...|+..+.++.+.+| ...........+++|||+. .|.....+..  ..++...+..++.||+.+|.+|| ..|++|+
T Consensus        56 ~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~-~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~iiH~  133 (279)
T cd05111          56 ITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSP-LGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE-EHRMVHR  133 (279)
T ss_pred             HHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCC-CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HCCEecc
Confidence            3345566666655442 1111111234568999996 4554444432  35788888999999999999999 5899999


Q ss_pred             CCCCCceEEe-CCeEEEEEcccccc
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||||.|||+. ++.++|+|||.+..
T Consensus       134 dlkp~nili~~~~~~kl~Dfg~~~~  158 (279)
T cd05111         134 NLAARNILLKSDSIVQIADFGVADL  158 (279)
T ss_pred             ccCcceEEEcCCCcEEEcCCcccee
Confidence            9999999995 57899999999853

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.62  E-value=7.1e-15  Score=127.53  Aligned_cols=138  Identities=20%  Similarity=0.201  Sum_probs=104.0

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||+|.+|.||++....+        |+.+++|+++......                         ......+|+..+.+
T Consensus         1 l~~g~~~~v~~~~~~~~--------~~~~~~K~~~~~~~~~-------------------------~~~~~~~e~~~~~~   47 (215)
T cd00180           1 LGEGGFGTVYLARDKKT--------GKKVAIKIIKKEDSSS-------------------------LLEELLREIEILKK   47 (215)
T ss_pred             CCcCCceEEEEEEecCC--------CcEEEEEEeccccchh-------------------------HHHHHHHHHHHHHh
Confidence            68999999999998555        8999999998632100                         12234678899998


Q ss_pred             hhhCCCCccccccc----cceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        123 MYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       123 L~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      +.+.+  ++.++..    ...+++|||++ ++.....+...  .++...+..++.+++.++.+|| ..|++|+||+|.||
T Consensus        48 l~~~~--i~~~~~~~~~~~~~~~~~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~~~H~dl~~~ni  123 (215)
T cd00180          48 LNHPN--IVKLYGVFEDENHLYLVMEYCE-GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLH-SNGIIHRDLKPENI  123 (215)
T ss_pred             cCCCC--eeeEeeeeecCCeEEEEEecCC-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHhhE
Confidence            87754  3444432    35689999995 23333333332  5788889999999999999999 58999999999999


Q ss_pred             EEeC--CeEEEEEccccccCCCC
Q psy10135        197 LVHK--ATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       197 Li~~--g~l~IIDFG~Av~~~~p  217 (351)
                      ++.+  +.++|+|||.+.....+
T Consensus       124 ~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180         124 LLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             EEeCCCCcEEEecCCceEEccCC
Confidence            9965  89999999999766443

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.62  E-value=5.9e-15  Score=135.09  Aligned_cols=144  Identities=18%  Similarity=0.166  Sum_probs=107.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|++|.||+|....+        +..+|+|.++....                            .....+
T Consensus         4 ~y~~~~~i~~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~----------------------------~~~~~~   47 (256)
T cd06612           4 VFDILEKLGEGSYGSVYKAIHKET--------GQVVAIKVVPVEED----------------------------LQEIIK   47 (256)
T ss_pred             cchhhhhhcCCCCeEEEEEEEcCC--------CcEEEEEEeecHHH----------------------------HHHHHH
Confidence            478889999999999999998555        88999999865210                            112346


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..++++.+.++ ++...+. ....+++|||++ .+.....+.  ...++...+..++.+++.+|.+|| ..|++|+||
T Consensus        48 e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~-~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh-~~~i~H~dl  125 (256)
T cd06612          48 EISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG-AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH-SNKKIHRDI  125 (256)
T ss_pred             HHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC-CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCC
Confidence            8888888866553 2222222 245679999995 333222222  345788889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCCCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~~p  217 (351)
                      +|.||++. ++.++|+|||.+....++
T Consensus       126 ~~~ni~~~~~~~~~l~dfg~~~~~~~~  152 (256)
T cd06612         126 KAGNILLNEEGQAKLADFGVSGQLTDT  152 (256)
T ss_pred             CcceEEECCCCcEEEcccccchhcccC
Confidence            99999995 688999999998765543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.62  E-value=2.3e-15  Score=145.23  Aligned_cols=143  Identities=13%  Similarity=0.155  Sum_probs=104.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |..+|||.+....   ..                   ...  .....+|
T Consensus         9 y~~~~~lg~g~~~~v~~~~~~~~--------~~~~~vK~~~~~~---~~-------------------~~~--~~~~~~E   56 (337)
T cd07852           9 YEILQKLGKGAYGIVWKAIDRRT--------KEVVALKKIFDAF---RN-------------------ATD--AQRTFRE   56 (337)
T ss_pred             HHHhHhhcCCCCeeEEEEEEcCC--------CeEEEEEeecccc---Cc-------------------chh--hhhhhHH
Confidence            78889999999999999998556        8899999875311   00                   000  1123468


Q ss_pred             HHHHHHh-hhCCC-Cccccccc---cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRM-YSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++ .+.+| ++...+..   ...++||||++  |.....+....++......++.||+.+|.+|| ..||+|+||
T Consensus        57 ~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~i~H~dl  133 (337)
T cd07852          57 IMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME--TDLHAVIRANILEDVHKRYIMYQLLKALKYIH-SGNVIHRDL  133 (337)
T ss_pred             HHHHHHhcCCCCccceeeeeccCCCceEEEEecccc--cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCC
Confidence            8889888 66553 33222211   23589999995  44433344445677778889999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.|||+. ++.++|+|||.+...
T Consensus       134 ~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852         134 KPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             CHHHEEEcCCCcEEEeeccchhcc
Confidence            99999995 689999999988654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.62  E-value=5.2e-15  Score=135.93  Aligned_cols=146  Identities=14%  Similarity=0.150  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||.+....+        |+.||||.++......                      .  ....+..|
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~--------~~~~~ik~~~~~~~~~----------------------~--~~~~~~~e   49 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKED--------GKQYVIKEINISKMSP----------------------K--EREESRKE   49 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCC--------CCEEEEEEEEhHhCCh----------------------H--HHHHHHHH
Confidence            78899999999999999998666        8999999886421100                      0  01234568


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..++++.+.++. +...+.. ...++||||+. .|.....+..   ..++..++..++.|++.++.+|| .+|++|+||
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~~l  127 (256)
T cd08218          50 VAVLSNMKHPNIVQYQESFEENGNLYIVMDYCE-GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH-DRKILHRDI  127 (256)
T ss_pred             HHHHHhCCCCCeeeeEeeecCCCeEEEEEecCC-CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCC
Confidence            8889988776532 2222222 44579999995 3333333322   24677888899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      +|.|||+. ++.++|+|||.+.....
T Consensus       128 ~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218         128 KSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CHHHEEEcCCCCEEEeeccceeecCc
Confidence            99999995 57899999999865543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0666|consensus

Probab=99.62  E-value=3.3e-16  Score=149.85  Aligned_cols=153  Identities=25%  Similarity=0.254  Sum_probs=110.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|.+|.||+|....+    +......+|||.++.+.-       + +                -+...|-+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~----n~kr~k~yAiKkfk~~kd-------~-t----------------GiS~SAcR   76 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNT----NDKRTKEYAIKKFKGEKD-------G-T----------------GISMSACR   76 (438)
T ss_pred             HhhccceecccccceeeEeeeccC----CcccchhhHHHHHhccCC-------C-C----------------CcCHHHHH
Confidence            388999999999999999966332    111134799998876321       1 1                12234567


Q ss_pred             HHHHHHHhhhCCC-Cccccccc--cceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL--KSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..++.|.+.++ ...+++..  ...+|++||...+-+.......    ..++...++.+++||+.++.+|| .+-|+|
T Consensus        77 EiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH-~NWvlH  155 (438)
T KOG0666|consen   77 EIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH-SNWVLH  155 (438)
T ss_pred             HHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh-hhheee
Confidence            8888888887764 33444433  3456999999655554333222    24778889999999999999999 489999


Q ss_pred             cCCCCCceEE-eC----CeEEEEEccccccCCCC
Q psy10135        189 ADLSEYNMLV-HK----ATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       189 ~DLkp~NILi-~~----g~l~IIDFG~Av~~~~p  217 (351)
                      |||||.|||+ .+    |.++|.|||+|+....|
T Consensus       156 RDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~p  189 (438)
T KOG0666|consen  156 RDLKPANILVMGDGPERGRVKIADLGLARLFNNP  189 (438)
T ss_pred             ccCCcceEEEeccCCccCeeEeecccHHHHhhcc
Confidence            9999999999 34    89999999999876544

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.62  E-value=3.5e-15  Score=143.58  Aligned_cols=140  Identities=9%  Similarity=0.123  Sum_probs=101.6

Q ss_pred             ecceeeec--CceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         39 VNGCISTG--KEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        39 I~~~Ig~G--~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+.||.|  +++.||+|....+        |+.||||+++.....                        .....+...|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~--------~~~vaiK~~~~~~~~------------------------~~~~~~~~~e   49 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPT--------GEYVTVRRINLEACT------------------------NEMVTFLQGE   49 (327)
T ss_pred             hhhhccccccceEEEEEEeeccc--------CcEEEEEEechhhcc------------------------HHHHHHHHHH
Confidence            56889999  7899999998777        999999998652110                        0112244568


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..++.+.+.+| ++...+.. ...++||||+. .|.....+.   ...++...+..++.|++.+|.+|| .+||||+||
T Consensus        50 ~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~iiH~dl  127 (327)
T cd08227          50 LHVSKLFNHPNIVPYRATFIADNELWVVTSFMA-YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH-HMGYVHRSV  127 (327)
T ss_pred             HHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC-CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCC
Confidence            888888876653 22212211 44579999995 343322232   234788888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av  212 (351)
                      ||.|||+. ++.+++.||+.+.
T Consensus       128 kp~Nil~~~~~~~~l~~~~~~~  149 (327)
T cd08227         128 KASHILISVDGKVYLSGLRSNL  149 (327)
T ss_pred             ChhhEEEecCCcEEEcccchhh
Confidence            99999995 6889999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.62  E-value=4.7e-15  Score=138.17  Aligned_cols=141  Identities=20%  Similarity=0.229  Sum_probs=103.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|....+        ++.||||.++......                         ......+|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~--------~~~~~ik~~~~~~~~~-------------------------~~~~~~~e   47 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKET--------GELVAIKKMKKKFYSW-------------------------EECMNLRE   47 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCC--------CcEEEEEEehhhccch-------------------------hHHHHHHH
Confidence            67889999999999999998555        8899999886532100                         00112346


Q ss_pred             HHHHHHhh-hCCCCcccccc----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMY-SEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~-~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..+.++. +.++  +..+.    ....++||||+  +|.....+..   ..++..++..++.|++.+|.+|| .+|++|
T Consensus        48 ~~~l~~~~~h~~i--~~~~~~~~~~~~~~lv~e~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh-~~~i~H  122 (283)
T cd07830          48 VKSLRKLNEHPNI--VKLKEVFRENDELYFVFEYM--EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH-KHGFFH  122 (283)
T ss_pred             HHHHHhccCCCCc--hhHHHHhhcCCcEEEEEecC--CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH-HCCccc
Confidence            77777776 4442  22221    24568999999  4555444433   25788889999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +||+|.||+++ ++.++|+|||.+....
T Consensus       123 ~dl~~~ni~i~~~~~~~l~d~~~~~~~~  150 (283)
T cd07830         123 RDLKPENLLVSGPEVVKIADFGLAREIR  150 (283)
T ss_pred             CCCChhhEEEcCCCCEEEeecccceecc
Confidence            99999999996 5899999999986543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.61  E-value=5.6e-15  Score=137.47  Aligned_cols=142  Identities=18%  Similarity=0.167  Sum_probs=102.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|....+        |..||||+++....   . .                    ........|
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~--------~~~~aiK~~~~~~~---~-~--------------------~~~~~~~~e   48 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNT--------GRFVALKKVRVPLS---E-E--------------------GIPLSTLRE   48 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCC--------CCEEEEEEeccccc---c-c--------------------hhhhhHHHH
Confidence            67889999999999999998556        89999999975321   0 0                    001122346


Q ss_pred             HHHHHHhh---hCCCCccccccc----cc-----eEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMY---SEGLNVPKPILL----KS-----HVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL~---~~gi~vP~pi~~----~~-----~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      +..+.++.   +.++  .+.+..    ..     .+++|||++  +.....+..   ..++...+..+..|++.+|.+||
T Consensus        49 ~~~l~~l~~~~h~~i--~~~~~~~~~~~~~~~~~~~l~~e~~~--~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH  124 (287)
T cd07838          49 IALLKQLESFEHPNI--VRLLDVCHGPRTDRELKLTLVFEHVD--QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH  124 (287)
T ss_pred             HHHHHHhhccCCCCc--ceEEEEEeeccCCCCceeEEEehhcc--cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            66666664   3332  222211    22     679999995  433333322   24788889999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                       ..|++|+||+|.|||+. ++.++|+|||.+....
T Consensus       125 -~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838         125 -SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             -HCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence             59999999999999995 5889999999986654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.61  E-value=4.1e-15  Score=135.81  Aligned_cols=146  Identities=20%  Similarity=0.178  Sum_probs=103.8

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      +|.+.||.|+||.||+|.....    ....+..||+|+++.....                        . .......|+
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~vaiK~~~~~~~~------------------------~-~~~~~~~e~   52 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGL----SGEKEVEVAVKTLKEDADE------------------------Q-QIEEFLREA   52 (258)
T ss_pred             cccceeccCCCcceEEEEecCC----CCCCCceEEEEEccCCCCh------------------------H-HHHHHHHHH
Confidence            5678999999999999988443    0011388999998653210                        0 011234688


Q ss_pred             HHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccC-C--CCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        118 RNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDT-P--LTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~-~--l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ..|.++.+.++  ...+..    ...+++|||+. +|.....+... .  ++..++..++.|++.++..|| ..|++|+|
T Consensus        53 ~~l~~l~~~~i--~~~~~~~~~~~~~~~i~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh-~~~~~h~d  128 (258)
T smart00219       53 RIMRKLDHPNI--VKLLGVCTEEEPLMIVMEYME-GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE-SKNFIHRD  128 (258)
T ss_pred             HHHHhcCCCch--heEEEEEcCCCeeEEEEeccC-CCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh-cCCeeecc
Confidence            88888866553  223322    45689999995 23332233322 2  788889999999999999999 58999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |+|.||+++ ++.++|+|||.+....+
T Consensus       129 l~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219      129 LAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             cccceEEEccCCeEEEcccCCceeccc
Confidence            999999996 46899999999865543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.61  E-value=2.8e-15  Score=137.14  Aligned_cols=139  Identities=24%  Similarity=0.225  Sum_probs=99.3

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||.|++|.||+|.+..+        |+.+|||+++......+                       ........|+..+.+
T Consensus         1 lg~g~~~~vy~~~~~~~--------~~~~~~k~~~~~~~~~~-----------------------~~~~~~~~e~~~l~~   49 (265)
T cd05579           1 ISKGAYGRVFLAKKKST--------GDIYAIKVIKKADMIRK-----------------------NQVDQVLTERDILSQ   49 (265)
T ss_pred             CCCCCceEEEEEEECCC--------CCEEEEEEecchhhhhh-----------------------hHHHHHHHHHHHHHh
Confidence            68999999999998666        89999999875321110                       011123457777777


Q ss_pred             hhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe
Q psy10135        123 MYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH  199 (351)
Q Consensus       123 L~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~  199 (351)
                      +.+.++ ++...+. ....++||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|++|+||+|.||++.
T Consensus        50 ~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH-~~~i~H~di~~~nil~~  127 (265)
T cd05579          50 AQSPYVVKLYYSFQGKKNLYLVMEYLP-GGDLASLLENVGSLDEDVARIYIAEIVLALEYLH-SNGIIHRDLKPDNILID  127 (265)
T ss_pred             CCCcchhHHHHheecCcEEEEEEecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HcCeecCCCCHHHeEEc
Confidence            765542 2211222 234589999995 2333222322 35788888999999999999999 59999999999999995


Q ss_pred             -CCeEEEEEccccccC
Q psy10135        200 -KATLFIIDVAQSVEH  214 (351)
Q Consensus       200 -~g~l~IIDFG~Av~~  214 (351)
                       ++.++|+|||.+...
T Consensus       128 ~~~~~~l~dfg~~~~~  143 (265)
T cd05579         128 SNGHLKLTDFGLSKVG  143 (265)
T ss_pred             CCCCEEEEecccchhc
Confidence             689999999988644

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.61  E-value=4.9e-15  Score=140.54  Aligned_cols=151  Identities=16%  Similarity=0.108  Sum_probs=100.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+...||.|+||.||+|..... .......+..+|||+++.... ...                        ......
T Consensus        16 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~~~~~v~iK~~~~~~~-~~~------------------------~~~~~~   69 (304)
T cd05101          16 KLTLGKPLGEGCFGQVVMAEALGI-DKDKPKEAVTVAVKMLKDDAT-EKD------------------------LSDLVS   69 (304)
T ss_pred             HeeecceeeccCCceEEEEEEecc-CCCCCCcceeEEeeecccccc-hHH------------------------HHHHHH
Confidence            488999999999999999974210 000011155799998864210 000                        112346


Q ss_pred             HHHHHHHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECVV  175 (351)
Q Consensus       116 E~~nL~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll~  175 (351)
                      |+..+.++ .+.+| ++...+.. ...++||||+. .|.....+..                 ..++..++..++.||+.
T Consensus        70 E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~  148 (304)
T cd05101          70 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVAR  148 (304)
T ss_pred             HHHHHHhhccCCCchheeEEEecCCceEEEEecCC-CCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHH
Confidence            78888887 34432 22222211 34579999996 3433222211                 23566678889999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.+|| ..|+||+||||.|||+. ++.++|+|||.|...
T Consensus       149 al~~LH-~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~  187 (304)
T cd05101         149 GMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDV  187 (304)
T ss_pred             HHHHHH-HCCeeecccccceEEEcCCCcEEECCCccceec
Confidence            999999 59999999999999995 588999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.61  E-value=2.7e-15  Score=142.67  Aligned_cols=144  Identities=19%  Similarity=0.107  Sum_probs=105.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||.|++|.||+|....+        |+.||||+++.......                       .......+|
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~~~--------~~~v~iK~~~~~~~~~~-----------------------~~~~~~~~E   65 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDVRT--------NEVVAIKKMSYSGKQSN-----------------------EKWQDIIKE   65 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEcCC--------CcEEEEEEEeccccCcH-----------------------HHHHHHHHH
Confidence            88889999999999999998556        89999998864211000                       001123468


Q ss_pred             HHHHHHhhhCCC-Cccccc-cccceEEEEcccCccccccccc--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKL--KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L--~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.++ .....+ .....+|||||++  |.....+  ....++...+..++.|++.+|.+|| .+|++|+||+
T Consensus        66 i~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~--g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH-~~~i~H~dl~  142 (307)
T cd06607          66 VRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL--GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH-SHERIHRDIK  142 (307)
T ss_pred             HHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC--CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCC
Confidence            888888876653 211111 1245689999994  5433222  2345788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.||++. ++.++|+|||.+...
T Consensus       143 p~nIl~~~~~~~kL~dfg~~~~~  165 (307)
T cd06607         143 AGNILLTEPGTVKLADFGSASLV  165 (307)
T ss_pred             cccEEECCCCCEEEeecCcceec
Confidence            9999994 689999999988543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0033|consensus

Probab=99.61  E-value=2.4e-17  Score=153.39  Aligned_cols=159  Identities=20%  Similarity=0.202  Sum_probs=116.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++-..||+|.|++||++...++        |+.+|+|++.+....-++                        -.-.++
T Consensus        12 ~y~l~e~igkG~FSvVrRc~~~~t--------g~~fa~kiin~~k~~~~~------------------------~e~l~r   59 (355)
T KOG0033|consen   12 NYDVKEELGKGAFSVVRRCVHKTT--------GLEFAAKIINTKKLSARD------------------------FQKLER   59 (355)
T ss_pred             hhhHHHHHccCchHHHHHHHhccc--------hHHHHHHHhhhhhhcccc------------------------HHHHHH
Confidence            378889999999999999998787        999999999874321111                        112356


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccc-ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKL-KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L-~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+++-..|.++.| ...+.|. ...++||+|++. +|.....+ +..-+++..+..+.+||+++|.++| .+||||||+|
T Consensus        60 EarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~-G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH-~n~IvHRDvk  137 (355)
T KOG0033|consen   60 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT-GGELFEDIVAREFYSEADASHCIQQILEALAYCH-SNGIVHRDLK  137 (355)
T ss_pred             HHHHHHhcCCCcEeehhhhhcccceeEEEEeccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCceeccCC
Confidence            8888777766553 3333332 255789999994 22221111 2223677778889999999999999 5999999999


Q ss_pred             CCceEEe----CCeEEEEEccccccCC------------CCChHHHHHhhhh
Q psy10135        193 EYNMLVH----KATLFIIDVAQSVEHD------------HPHALQFLRKDCD  228 (351)
Q Consensus       193 p~NILi~----~g~l~IIDFG~Av~~~------------~p~a~~fl~~D~~  228 (351)
                      |.|+|+-    ..-++|.|||.|.+.+            +-+|.+.+++|-.
T Consensus       138 P~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy  189 (355)
T KOG0033|consen  138 PENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPY  189 (355)
T ss_pred             hhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCC
Confidence            9999993    2469999999998763            4567899999863

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.61  E-value=5.3e-15  Score=137.27  Aligned_cols=146  Identities=18%  Similarity=0.138  Sum_probs=102.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|....+     ...+..||||+++.... .                      . . ......|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~-----~~~~~~vaiK~~~~~~~-~----------------------~-~-~~~~~~e   55 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLP-----GKREIFVAIKTLKSGYT-E----------------------K-Q-RRDFLSE   55 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecC-----CCCceeEEEEEcCCCCC-H----------------------H-H-HHHHHHH
Confidence            78899999999999999987443     00023699999864210 0                      0 0 1112457


Q ss_pred             HHHHHHhhhCCCCcc-cccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLNVP-KPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...+..+.+.++... ..+. ....++||||++ .|.....+.  ...++..++..++.|++.++.+|| .+|++|+|||
T Consensus        56 ~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH-~~g~~H~dl~  133 (269)
T cd05065          56 ASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME-NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS-EMNYVHRDLA  133 (269)
T ss_pred             HHHHHhCCCcCcceEEEEECCCCceEEEEecCC-CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccC
Confidence            888888876653221 1111 134589999995 343322333  234778888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ ++.++|+|||.+...
T Consensus       134 p~nili~~~~~~kl~dfg~~~~~  156 (269)
T cd05065         134 ARNILVNSNLVCKVSDFGLSRFL  156 (269)
T ss_pred             hheEEEcCCCcEEECCCcccccc
Confidence            9999995 578999999987543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.61  E-value=4.7e-15  Score=139.28  Aligned_cols=140  Identities=16%  Similarity=0.174  Sum_probs=93.8

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      +||.|++|.||+|.+..+        |+.||||++..........                       ......|...+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~~-----------------------~~~~~~~~~~~~   49 (278)
T cd05606           1 IIGRGGFGEVYGCRKADT--------GKMYAMKCLDKKRIKMKQG-----------------------ETLALNERIMLS   49 (278)
T ss_pred             CcccCCCeEEEEEEEecC--------CCEEEEEEeeccccccchh-----------------------HHHHHHHHHHHH
Confidence            489999999999988555        8999999987532110000                       001112333333


Q ss_pred             Hhhh---CCC-Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        122 RMYS---EGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       122 rL~~---~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      .+..   ..+ .....+. ....++||||+. +|.....+. ...++...+..++.|++.+|.+|| ..|++|+||||.|
T Consensus        50 ~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~di~p~n  127 (278)
T cd05606          50 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMN-GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMH-NRFVVYRDLKPAN  127 (278)
T ss_pred             HHHhCCCCcEeeeeeeeecCCEEEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCEEcCCCCHHH
Confidence            3322   221 1111111 134579999995 343333332 345888899999999999999999 5999999999999


Q ss_pred             eEE-eCCeEEEEEccccccC
Q psy10135        196 MLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi-~~g~l~IIDFG~Av~~  214 (351)
                      ||+ .++.++|+|||.+...
T Consensus       128 ili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606         128 ILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             EEECCCCCEEEccCcCcccc
Confidence            999 4688999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.61  E-value=6.7e-15  Score=140.22  Aligned_cols=148  Identities=16%  Similarity=0.115  Sum_probs=103.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.....   .....+..+|||+++.....                         ........|
T Consensus        37 ~~~~~~ig~G~~g~V~~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E   88 (302)
T cd05055          37 LSFGKTLGAGAFGKVVEATAYGL---SKSDAVMKVAVKMLKPTAHS-------------------------SEREALMSE   88 (302)
T ss_pred             eEEcceeeccCCeeEEEEEEecC---CCCCceeEEEEEecCccCCh-------------------------HHHHHHHHH
Confidence            88999999999999999975211   00011568999988753210                         001123568


Q ss_pred             HHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ...|.++ .+.+| +....+. ....++||||+. .|.+...+..   ..++..++..++.+++.+|.+|| ..|+||+|
T Consensus        89 ~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~ivH~d  166 (302)
T cd05055          89 LKIMSHLGNHENIVNLLGACTIGGPILVITEYCC-YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA-SKNCIHRD  166 (302)
T ss_pred             HHHHHhccCCCCcceEEEEEecCCceEEEEEcCC-CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeehhh
Confidence            8889888 45543 2221111 244689999995 4444333332   22788888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       167 lkp~Nil~~~~~~~~l~dfg~~~~~  191 (302)
T cd05055         167 LAARNVLLTHGKIVKICDFGLARDI  191 (302)
T ss_pred             hccceEEEcCCCeEEECCCcccccc
Confidence            999999995 578999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.61  E-value=6.9e-15  Score=134.96  Aligned_cols=143  Identities=19%  Similarity=0.189  Sum_probs=107.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+..+        |+.||||+++.....                         .......+|
T Consensus         3 ~~~~~~i~~g~~~~v~~~~~~~~--------~~~~~vk~~~~~~~~-------------------------~~~~~~~~e   49 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVRHKPT--------GKIYALKKIHVDGDE-------------------------EFRKQLLRE   49 (264)
T ss_pred             ceeeeeeeecCCeEEEEEEEcCC--------CcEEEEEEeccCcch-------------------------HHHHHHHHH
Confidence            67889999999999999998666        899999998753210                         112224568


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhh-CCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNK-CHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~-~glVH~DLk  192 (351)
                      +..+.++.+.++ ++...+. ....++||||+. .|.....+.. ..++......+..|++.++.+|| . .|++|+||+
T Consensus        50 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh-~~~~~~H~~l~  127 (264)
T cd06623          50 LKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD-GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLH-TKRHIIHRDIK  127 (264)
T ss_pred             HHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHh-ccCCCccCCCC
Confidence            888888876553 2222121 144579999995 3333333332 46888888999999999999999 6 899999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.||++. ++.++|+|||.+...
T Consensus       128 ~~ni~~~~~~~~~l~df~~~~~~  150 (264)
T cd06623         128 PSNLLINSKGEVKIADFGISKVL  150 (264)
T ss_pred             HHHEEECCCCCEEEccCccceec
Confidence            9999994 688999999988654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0662|consensus

Probab=99.61  E-value=9.1e-16  Score=137.56  Aligned_cols=148  Identities=16%  Similarity=0.141  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.-.+.||+|.+|+||+|+...+        ++.||+|..+...     .+.                   -+...+.+|
T Consensus         4 ydkmekigegtygtvfkarn~~t--------~eivalkrvrldd-----dde-------------------gvpssalre   51 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRET--------HEIVALKRVRLDD-----DDE-------------------GVPSSALRE   51 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCc--------cceEEEEEEeccC-----CCC-------------------CCcHHHHHH
Confidence            34457899999999999998777        8999999887521     111                   112335567


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +-.|+.|.+.+| ....++.. +..-||+|||..+-...-.--...+..+-++.++.|++.++..+| .+++.||||||.
T Consensus        52 icllkelkhknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fch-shnvlhrdlkpq  130 (292)
T KOG0662|consen   52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH-SHNVLHRDLKPQ  130 (292)
T ss_pred             HHHHHHhhhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh-hhhhhhccCCcc
Confidence            777777766553 33333322 345699999942111111111245778888999999999999999 589999999999


Q ss_pred             ceEE-eCCeEEEEEccccccCCCC
Q psy10135        195 NMLV-HKATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       195 NILi-~~g~l~IIDFG~Av~~~~p  217 (351)
                      |+|| .+|.+++.|||+|+..+-|
T Consensus       131 nllin~ngelkladfglarafgip  154 (292)
T KOG0662|consen  131 NLLINRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             eEEeccCCcEEecccchhhhcCCc
Confidence            9999 5799999999999876654

>KOG0582|consensus

Probab=99.61  E-value=3.5e-15  Score=148.14  Aligned_cols=144  Identities=21%  Similarity=0.277  Sum_probs=110.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++...||.|..+.||+|+..+.        +..||||++....                    |..+   +  ....+
T Consensus        27 ~YeL~e~IG~G~sa~V~~A~c~p~--------~e~VAIK~inLEk--------------------c~~~---l--d~l~k   73 (516)
T KOG0582|consen   27 DYELQEVIGVGASAVVYLARCIPT--------NEVVAIKIINLEK--------------------CNND---L--DALRK   73 (516)
T ss_pred             ceeEEEEEeccceeEeeeeeeccc--------CCEEEEEEeehhh--------------------hhhh---H--HHHHH
Confidence            499999999999999999999777        8999999987521                    1001   0  12357


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |..+|.-+.+.+| ..-..|.. ...++||.|+. .|..+.-++.   .++++.-+..+..+++.+|.+||+ +|-||||
T Consensus        74 E~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa-~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~-~G~IHRd  151 (516)
T KOG0582|consen   74 EVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMA-GGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ-NGHIHRD  151 (516)
T ss_pred             HHHHhhhcCCCCcceEEEEEEecceeEEeehhhc-CCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh-cCceecc
Confidence            8888888877663 22222222 45579999996 5655554443   358888899999999999999995 9999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|+.|||++ +|.++|.|||.+..+
T Consensus       152 vKAgnILi~~dG~VkLadFgvsa~l  176 (516)
T KOG0582|consen  152 VKAGNILIDSDGTVKLADFGVSASL  176 (516)
T ss_pred             cccccEEEcCCCcEEEcCceeeeee
Confidence            999999994 799999999987544

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.61  E-value=5.1e-15  Score=140.81  Aligned_cols=149  Identities=16%  Similarity=0.091  Sum_probs=101.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.|.+.||+|+||.||+|.+....+ .....+..+|+|+++..... .                      .  ......
T Consensus        19 ~~~i~~~lg~G~~g~V~~~~~~~~~~-~~~~~~~~~aiK~~~~~~~~-~----------------------~--~~~~~~   72 (307)
T cd05098          19 RLVLGKPLGEGCFGQVVMAEAIGLDK-EKPNRVTKVAVKMLKSDATE-K----------------------D--LSDLIS   72 (307)
T ss_pred             HeEEeeeeccCCCeeEEEeEEeccCC-cccCccceEEEEeccCCCCh-H----------------------H--HHHHHH
Confidence            38999999999999999997522100 00001357999998752100 0                      0  011345


Q ss_pred             HHHHHHHh-hhCCCCcccccc----ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYREC  173 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~ql  173 (351)
                      |+..+.++ .+.+  +++.+.    ....++||||++ .|.....+..                 ..++..++..++.|+
T Consensus        73 e~~~l~~l~~h~~--i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  149 (307)
T cd05098          73 EMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYAS-KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQV  149 (307)
T ss_pred             HHHHHHHhcCCCC--EeeEEEEEecCCceEEEEecCC-CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHH
Confidence            77888887 3433  222222    245689999996 4433322221                 236677888999999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| .+|++|+||||.|||+. ++.++|+|||.|...
T Consensus       150 ~~aL~~lH-~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~  190 (307)
T cd05098         150 ARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI  190 (307)
T ss_pred             HHHHHHHH-HCCcccccccHHheEEcCCCcEEECCCcccccc
Confidence            99999999 59999999999999995 688999999998644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=1.6e-15  Score=155.81  Aligned_cols=160  Identities=11%  Similarity=0.088  Sum_probs=99.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.++||+|+||.||+|..+..       .+..+++|.............+.+.  .+..     ..  .......++
T Consensus       149 ~Y~ii~~LG~G~fG~Vyl~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--k~~~-----~~--~~~~~~~~~  212 (501)
T PHA03210        149 HFRVIDDLPAGAFGKIFICALRAS-------TEEAEARRGVNSTNQGKPKCERLIA--KRVK-----AG--SRAAIQLEN  212 (501)
T ss_pred             ccEEEeEecCCCCcceEEEEEecc-------chhhhhhhccccccccchhhhhhHh--HHhh-----cc--hHHHHHHHH
Confidence            399999999999999999976332       1344444433221100000000000  0000     00  112233568


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccC------CCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDT------PLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~------~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+.+|.+|.+.+| .+-..+.. ...++||++++  +..+..+...      .....+++.++.||+.+|.+|| .+|||
T Consensus       213 Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH-~~gIi  289 (501)
T PHA03210        213 EILALGRLNHENILKIEEILRSEANTYMITQKYD--FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH-DKKLI  289 (501)
T ss_pred             HHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc--cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH-hCCee
Confidence            9999999987663 22222222 34679999984  3333322221      1234567789999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.|...
T Consensus       290 HrDLKP~NILl~~~~~vkL~DFGla~~~  317 (501)
T PHA03210        290 HRDIKLENIFLNCDGKIVLGDFGTAMPF  317 (501)
T ss_pred             cCCCCHHHEEECCCCCEEEEeCCCceec
Confidence            999999999995 689999999999654

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.61  E-value=5.7e-15  Score=139.03  Aligned_cols=148  Identities=20%  Similarity=0.104  Sum_probs=102.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.....   -....+..+|+|.++.....                          .......
T Consensus         6 ~~~~~~~lg~G~~~~v~~~~~~~~---~~~~~~~~~~ik~~~~~~~~--------------------------~~~~~~~   56 (288)
T cd05093           6 NIVLKRELGEGAFGKVFLAECYNL---CPEQDKILVAVKTLKDASDN--------------------------ARKDFHR   56 (288)
T ss_pred             HeeeccccCCcCCeeEEeeEeccC---CCCCcceEEEEEecCCcCHH--------------------------HHHHHHH
Confidence            478899999999999999975110   00111567999987642100                          0112346


Q ss_pred             HHHHHHHhhhCCCCcc-ccc-cccceEEEEcccCccccccccccc--------------CCCCHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVP-KPI-LLKSHVLLMTFIGEDGWPAAKLKD--------------TPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP-~pi-~~~~~vLVMEfig~~G~~~~~L~~--------------~~l~~~~~~~l~~qll~~L~~  179 (351)
                      |...|.++.+.++... ..+ .....++||||+. .|.....+..              ..++...+..+..|++.+|.+
T Consensus        57 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~  135 (288)
T cd05093          57 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK-HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVY  135 (288)
T ss_pred             HHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC-CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            8888888876654221 111 1245689999995 3332222211              137788889999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      || .+|++||||||.|||+. ++.++|+|||.+...
T Consensus       136 lH-~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  170 (288)
T cd05093         136 LA-SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV  170 (288)
T ss_pred             HH-hCCeeecccCcceEEEccCCcEEeccCCccccc
Confidence            99 59999999999999995 688999999998643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.61  E-value=3.6e-15  Score=141.43  Aligned_cols=141  Identities=14%  Similarity=0.141  Sum_probs=101.2

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .....||.|++|.||+|.+..+        +..||||.+.....  .                        .......|+
T Consensus        25 ~~~~~lg~g~~g~v~~~~~~~~--------~~~vaiK~~~~~~~--~------------------------~~~~~~~e~   70 (292)
T cd06658          25 DSFIKIGEGSTGIVCIATEKHT--------GKQVAVKKMDLRKQ--Q------------------------RRELLFNEV   70 (292)
T ss_pred             hhhhcccCCCCeEEEEEEECCC--------CCEEEEEEEecchH--H------------------------HHHHHHHHH
Confidence            3346799999999999998556        88999998754210  0                        011234577


Q ss_pred             HHHHHhhhCCC-Cccccc-cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        118 RNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       118 ~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      ..+..+.+.++ .....+ .....++||||+. +|.....+....++..++..++.||+.+|.+|| ..|+||+||+|.|
T Consensus        71 ~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~N  148 (292)
T cd06658          71 VIMRDYHHENVVDMYNSYLVGDELWVVMEFLE-GGALTDIVTHTRMNEEQIATVCLSVLRALSYLH-NQGVIHRDIKSDS  148 (292)
T ss_pred             HHHHhCCCCcHHHHHHheecCCeEEEEEeCCC-CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecCCCHHH
Confidence            77777765542 111111 1245689999995 333323334456788889999999999999999 5899999999999


Q ss_pred             eEEe-CCeEEEEEccccccC
Q psy10135        196 MLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~-~g~l~IIDFG~Av~~  214 (351)
                      |++. ++.++|+|||.+...
T Consensus       149 ill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658         149 ILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             EEEcCCCCEEEccCcchhhc
Confidence            9995 689999999988543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0577|consensus

Probab=99.61  E-value=3.2e-16  Score=159.66  Aligned_cols=138  Identities=22%  Similarity=0.215  Sum_probs=105.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH--H
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW--A  113 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~--a  113 (351)
                      +|.=++.||.|+||.||.|++..+        .+.||||-+.-+..   .                      -...|  .
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n--------~evVAIKKMsySGK---Q----------------------s~EKWqDI   73 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRN--------SEVVAIKKMSYSGK---Q----------------------SNEKWQDI   73 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCc--------cceeeeeecccccc---c----------------------cHHHHHHH
Confidence            355557899999999999999776        88999997643211   0                      11223  3


Q ss_pred             HHHHHHHHHhhhCCCCcccccccc-------ceEEEEcccCccccccccc--ccCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPILLK-------SHVLLMTFIGEDGWPAAKL--KDTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~~~-------~~vLVMEfig~~G~~~~~L--~~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      .+|+++|.+|.+++     .|.++       ..+||||||  -|.....|  ...+|-+.++..+....+.+|++|| ..
T Consensus        74 lKEVrFL~~l~HPn-----tieYkgCyLre~TaWLVMEYC--lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH-S~  145 (948)
T KOG0577|consen   74 LKEVRFLRQLRHPN-----TIEYKGCYLREHTAWLVMEYC--LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH-SH  145 (948)
T ss_pred             HHHHHHHHhccCCC-----cccccceeeccchHHHHHHHH--hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH-Hh
Confidence            58999999987654     33332       236899999  45543333  3346888889999999999999999 59


Q ss_pred             CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.||||||..|||+. .|.|+|.|||.|...
T Consensus       146 ~~IHRDiKAGNILLse~g~VKLaDFGSAsi~  176 (948)
T KOG0577|consen  146 NRIHRDIKAGNILLSEPGLVKLADFGSASIM  176 (948)
T ss_pred             hHHhhhccccceEecCCCeeeeccccchhhc
Confidence            999999999999995 699999999998654

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.61  E-value=5.3e-15  Score=138.09  Aligned_cols=145  Identities=19%  Similarity=0.154  Sum_probs=99.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||.|.....   .....+..||||.++.....                       .  ......+|
T Consensus         8 ~~~~~~ig~G~~g~v~~~~~~~~---~~~~~~~~~aik~~~~~~~~-----------------------~--~~~~~~~e   59 (277)
T cd05062           8 ITMSRELGQGSFGMVYEGIAKGV---VKDEPETRVAIKTVNEAASM-----------------------R--ERIEFLNE   59 (277)
T ss_pred             ceeeeeeccccCCeEEEEEeccC---CCCCceeEEEEEeccccCCH-----------------------H--HHHHHHHH
Confidence            88999999999999999976321   00112568999987542100                       0  01123467


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-----------CCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----------TPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----------~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      +..++++.+.+|  +..+.    ....++||||++ .|.....+..           ..++...+..++.|++.+|.+||
T Consensus        60 ~~~l~~l~~~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH  136 (277)
T cd05062          60 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMT-RGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN  136 (277)
T ss_pred             HHHHHhCCCCCe--eeEEEEEcCCCCeEEEEecCC-CCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            788888866553  22222    134689999995 3332222211           12345667888999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                       ..|+||+||||.|||+. ++.++|+|||.|..
T Consensus       137 -~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~  168 (277)
T cd05062         137 -ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD  168 (277)
T ss_pred             -HCCcccCCcchheEEEcCCCCEEECCCCCccc
Confidence             59999999999999995 68899999998854

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.61  E-value=6.6e-15  Score=136.72  Aligned_cols=146  Identities=17%  Similarity=0.097  Sum_probs=102.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.....     .+....||||+++.... ..                        .......|
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~~v~ik~~~~~~~-~~------------------------~~~~~~~e   57 (270)
T cd05056           8 ITLGRCIGEGQFGDVYQGVYMSP-----ENEKIAVAVKTCKNCTS-PS------------------------VREKFLQE   57 (270)
T ss_pred             ceeeeeeCCccceeEEEEEEecC-----CCCCcceEEEecCCcCC-HH------------------------HHHHHHHH
Confidence            67889999999999999986221     01134799998865321 00                        01112457


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...++++.+.++ +....+.....++||||+. .|.....+..  ..++...+..++.+++.+|.+|| .+|++|+||||
T Consensus        58 ~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~~~H~dl~p  135 (270)
T cd05056          58 AYIMRQFDHPHIVKLIGVITENPVWIVMELAP-LGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE-SKRFVHRDIAA  135 (270)
T ss_pred             HHHHHhCCCCchhceeEEEcCCCcEEEEEcCC-CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccCh
Confidence            788888865542 2222223345679999995 4444333332  24778888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.+...
T Consensus       136 ~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056         136 RNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             heEEEecCCCeEEccCceeeec
Confidence            999995 588999999988644

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.61  E-value=8.7e-15  Score=133.41  Aligned_cols=142  Identities=19%  Similarity=0.133  Sum_probs=102.6

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.....     ...+..||||+++......                         .......|+..+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~-----~~~~~~~~ik~~~~~~~~~-------------------------~~~~~~~e~~~l   50 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGK-----DGKTTEVAVKTLKEDASEE-------------------------ERKDFLKEARVM   50 (262)
T ss_pred             CccccCCceEEEEEEEecC-----CCCCceEEeEeeccccchh-------------------------HHHHHHHHHHHH
Confidence            4699999999999988321     0126789999987532100                         112345688888


Q ss_pred             HHhhhCCCCcccccc----ccceEEEEcccCccccccccccc----------CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        121 TRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD----------TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~----------~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      .++.+.++  ++.+.    ....++||||+. +|.....+..          ..++..++..++.|++.+|.+|| ..|+
T Consensus        51 ~~~~~~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH-~~~i  126 (262)
T cd00192          51 KKLGHPNV--VRLLGVCTEEEPLYLVLEYME-GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA-SKKF  126 (262)
T ss_pred             hhcCCCCh--heeeeeecCCCceEEEEEecc-CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH-cCCc
Confidence            88875543  22222    244589999994 3433333332          45788899999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      +|+||+|.||++. ++.++|+|||.+.....
T Consensus       127 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192         127 VHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             ccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999999996 48999999999976643

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.61  E-value=5.2e-15  Score=138.37  Aligned_cols=148  Identities=15%  Similarity=0.126  Sum_probs=101.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.....   .....+..||+|.++....                         ........+|
T Consensus         8 ~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~~~v~ik~~~~~~~-------------------------~~~~~~~~~e   59 (277)
T cd05036           8 ITLLRALGHGAFGEVYEGLYRGR---DGDAVELQVAVKTLPESCS-------------------------EQDESDFLME   59 (277)
T ss_pred             cEeeeECCCCCCCcEEEEEEecC---CCCCCceeEEEEEcCCCCC-------------------------HHHHHHHHHH
Confidence            78889999999999999988430   0000167899998754210                         0111223457


Q ss_pred             HHHHHHhhhCCCC-cccc-ccccceEEEEcccCccccccccccc--------CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        117 MRNLTRMYSEGLN-VPKP-ILLKSHVLLMTFIGEDGWPAAKLKD--------TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~p-i~~~~~vLVMEfig~~G~~~~~L~~--------~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      ...+.++.+.++. +... ......++||||+. +|.....+..        ..++...+..++.||+.+|.+|| ..|+
T Consensus        60 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~i  137 (277)
T cd05036          60 ALIMSKFNHQNIVRLIGVSFERLPRFILLELMA-GGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE-ENHF  137 (277)
T ss_pred             HHHHHhCCCCCEeeEEEEEccCCCcEEEEecCC-CCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCE
Confidence            8888888765531 1111 11244689999994 2332222211        13677788899999999999999 5899


Q ss_pred             cccCCCCCceEEeC-C---eEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVHK-A---TLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~~-g---~l~IIDFG~Av~~  214 (351)
                      ||+||||.|||+.. +   .++|+|||+|...
T Consensus       138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~  169 (277)
T cd05036         138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDI  169 (277)
T ss_pred             eecccchheEEEeccCCCcceEeccCcccccc
Confidence            99999999999963 2   5999999998654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0608|consensus

Probab=99.61  E-value=3.4e-16  Score=160.38  Aligned_cols=146  Identities=16%  Similarity=0.157  Sum_probs=99.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +...+.||.|+||.|.++.-..+        ...||+|.++....-.++....|               .....+.||..
T Consensus       631 Fvkik~iGvGAFGeV~Lv~KvDT--------~~lYAmKTLrKaDVl~rnQvaHV---------------KAERDILAEAD  687 (1034)
T KOG0608|consen  631 FVKIKTIGVGAFGEVCLVRKVDT--------RALYAMKTLRKADVLMRNQVAHV---------------KAERDILAEAD  687 (1034)
T ss_pred             eEEEeeecccccceeEEEeecch--------hhHHHHhhhHHHHHHhhhhhhhh---------------hhhhhhHhhcC
Confidence            66779999999999999976444        67899998876432211111111               01111222222


Q ss_pred             HHHHHHhhhCCCCccccc-cccceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      -.|+.+|+-       .| +....|+||+||. +|.....|.... +++.-++-+..+|..++...| +.|+|||||||.
T Consensus       688 n~WVVrLyy-------SFQDkdnLYFVMdYIP-GGDmMSLLIrmgIFeE~LARFYIAEltcAiesVH-kmGFIHRDiKPD  758 (1034)
T KOG0608|consen  688 NEWVVRLYY-------SFQDKDNLYFVMDYIP-GGDMMSLLIRMGIFEEDLARFYIAELTCAIESVH-KMGFIHRDIKPD  758 (1034)
T ss_pred             CcceEEEEE-------EeccCCceEEEEeccC-CccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH-hccceecccCcc
Confidence            233333321       11 1255689999997 666655555444 555556667778999999999 699999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||+ +|+++|.|||+|.-.
T Consensus       759 NILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  759 NILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             ceEEccCCceeeeeccccccc
Confidence            99994 899999999999643

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.61  E-value=4.6e-15  Score=142.03  Aligned_cols=157  Identities=17%  Similarity=0.120  Sum_probs=109.8

Q ss_pred             HHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCC
Q psy10135         24 RMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKK  103 (351)
Q Consensus        24 ~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~  103 (351)
                      .+.++.-...+-+|.....||.|++|.||+|.+..+        |..||||++.......                    
T Consensus        10 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~--------~~~v~ik~~~~~~~~~--------------------   61 (313)
T cd06633          10 IADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHT--------NEVVAVKKMSYSGKQT--------------------   61 (313)
T ss_pred             HHHHhccCCHHHHhhcceeeccCCCeEEEEEEECCC--------CcEEEEEEEeccccCc--------------------
Confidence            333433344444577788999999999999998556        8999999986531100                    


Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHH
Q psy10135        104 NPRKMVRTWAEKEMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       104 n~r~~vk~~aekE~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~  179 (351)
                       .. .. .....|...+.++.+.++ .....+. ....++||||++  |.....+.  ..+++..++..++.||+.++.+
T Consensus        62 -~~-~~-~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~  136 (313)
T cd06633          62 -NE-KW-QDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL--GSASDLLEVHKKPLQEVEIAAITHGALQGLAY  136 (313)
T ss_pred             -hH-HH-HHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence             00 11 123457888888876553 2222111 244689999995  43333332  2357788888999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      || ..|++|+||+|.||++. ++.++|+|||.+...
T Consensus       137 LH-~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         137 LH-SHNMIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             HH-HCCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            99 59999999999999995 588999999988543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.61  E-value=6.2e-15  Score=139.32  Aligned_cols=143  Identities=15%  Similarity=0.102  Sum_probs=99.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.||||+++.....-                         .......|
T Consensus        17 ~~~~~~lg~g~~~~v~~~~~~~~--------~~~~avK~~~~~~~~~-------------------------~~~~~~~e   63 (296)
T cd06618          17 LENLGEIGSGTCGQVYKMRFKKT--------GHVMAVKQMRRTGNKE-------------------------ENKRILMD   63 (296)
T ss_pred             heeeeEeeccCCeEEEEEEECCC--------CeEEEEEEEeccCChH-------------------------HHHHHHHH
Confidence            78899999999999999998656        8999999987532100                         00111234


Q ss_pred             HHHHHHhh-hCCC-Cccccc-cccceEEEEcccCccccccccc--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMY-SEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKL--KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L--~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ...+.++. +.+| .+...+ .....++||||++  +.....+  ....++......++.+++.+|.+||..+|++|+||
T Consensus        64 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~--~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl  141 (296)
T cd06618          64 LDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS--TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDV  141 (296)
T ss_pred             HHHHHhccCCCchHhhheeeecCCeEEEEeeccC--cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCC
Confidence            44444443 2221 111111 1245689999995  3221111  12357788888999999999999995479999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.|||+. ++.++|+|||.+...
T Consensus       142 ~p~nill~~~~~~kL~dfg~~~~~  165 (296)
T cd06618         142 KPSNILLDASGNVKLCDFGISGRL  165 (296)
T ss_pred             cHHHEEEcCCCCEEECccccchhc
Confidence            99999995 688999999998654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.60  E-value=6.5e-15  Score=135.25  Aligned_cols=138  Identities=15%  Similarity=0.150  Sum_probs=102.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.+ ..        +..+|||+++.....                           ......|
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~-~~--------~~~~~~k~~~~~~~~---------------------------~~~~~~e   49 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYW-LE--------KRKVAIKTIREGAMS---------------------------EEDFIEE   49 (256)
T ss_pred             eEEEeeecCcccceEEEEEE-eC--------CCeEEEEECCCCCCC---------------------------HHHHHHH
Confidence            67889999999999999987 45        778999988643210                           0012458


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..+.++.+.++  .+.+..    ...++||||+. .|.....+.  ...++...+..+..+++.++.+|| .+|++|+|
T Consensus        50 ~~~l~~l~~~~i--~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~h~d  125 (256)
T cd05112          50 AQVMMKLSHPKL--VQLYGVCTERSPICLVFEFME-HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE-SSNVIHRD  125 (256)
T ss_pred             HHHHHhCCCCCe--eeEEEEEccCCceEEEEEcCC-CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH-HCCccccc
Confidence            888888876553  222222    34679999995 333333332  234777888899999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|.||++. ++.++|+|||.+...
T Consensus       126 l~p~ni~i~~~~~~~l~d~g~~~~~  150 (256)
T cd05112         126 LAARNCLVGENQVVKVSDFGMTRFV  150 (256)
T ss_pred             cccceEEEcCCCeEEECCCcceeec
Confidence            999999995 578999999988654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.60  E-value=7.5e-15  Score=141.55  Aligned_cols=143  Identities=17%  Similarity=0.175  Sum_probs=101.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.+...      ..+..||||.++....   .                     ........+|
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~------~~~~~~aiK~~~~~~~---~---------------------~~~~~~~~~E   51 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAET------SEEETVAIKKITNVFS---K---------------------KILAKRALRE   51 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCC------CcCceEEEEEeccccc---c---------------------chhHHHHHHH
Confidence            77889999999999999997321      1167899998764210   0                     0011223467


Q ss_pred             HHHHHHhh-hCCCCcccccc--------ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        117 MRNLTRMY-SEGLNVPKPIL--------LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       117 ~~nL~rL~-~~gi~vP~pi~--------~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      +..+.++. +.+|  ++.+.        ....+++|+|++  +.....+. ...++...+..++.||+.+|.+|| ..|+
T Consensus        52 ~~~l~~l~~h~~i--v~~~~~~~~~~~~~~~~~~~~e~~~--~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~gi  126 (332)
T cd07857          52 LKLLRHFRGHKNI--TCLYDMDIVFPGNFNELYLYEELME--ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIH-SANV  126 (332)
T ss_pred             HHHHHHhcCCCCh--heeeeeeeeccccCCcEEEEEeccc--CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCc
Confidence            88888874 4332  22221        123578999995  43333332 245788889999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+||||.|||+. ++.++|+|||.|...
T Consensus       127 vH~dlkp~Nili~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857         127 LHRDLKPGNLLVNADCELKICDFGLARGF  155 (332)
T ss_pred             ccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence            9999999999995 688999999998643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.60  E-value=7.1e-15  Score=136.13  Aligned_cols=144  Identities=18%  Similarity=0.158  Sum_probs=102.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+..+.||.|++|.||+|....+     ......+|||.++.....                       . . ......|
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~-----~~~~~~~~ik~~~~~~~~-----------------------~-~-~~~~~~e   56 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMP-----GRKEVAVAIKTLKPGYTE-----------------------K-Q-RQDFLSE   56 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecC-----CCCceEEEEEeccccCCH-----------------------H-H-HHHHHHH
Confidence            67789999999999999987433     001237999988653210                       0 0 1112357


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ...+.++.+.++  .+.+.    ....++||||++ +|.....+.  ...++..++..++.+++.++.+|| ..|++|+|
T Consensus        57 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH-~~~i~H~d  132 (268)
T cd05063          57 ASIMGQFSHHNI--IRLEGVVTKFKPAMIITEYME-NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS-DMNYVHRD  132 (268)
T ss_pred             HHHHhcCCCCCe--eEEEEEEccCCCcEEEEEcCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccc
Confidence            777887765542  22222    144589999996 444333333  235788888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.+...
T Consensus       133 lkp~Nili~~~~~~kl~dfg~~~~~  157 (268)
T cd05063         133 LAARNILVNSNLECKVSDFGLSRVL  157 (268)
T ss_pred             cchhhEEEcCCCcEEECCCccceec
Confidence            999999995 578999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.60  E-value=2e-15  Score=156.23  Aligned_cols=177  Identities=20%  Similarity=0.279  Sum_probs=111.7

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhc--------cccccccccccccccCCChhHHH---
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDR--------DKYVNGEFRFRHGYCKKNPRKMV---  109 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~--------~~yv~ge~Rfr~~~~k~n~r~~v---  109 (351)
                      ..||+|++|.||+|+...+        |+.||||+.++.+...-..        ..++.   ++-.....-++..++   
T Consensus       125 ~PlasaSiaQVh~A~l~~~--------G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~---~~~~~~~~l~~~~~v~e~  193 (537)
T PRK04750        125 KPLASASIAQVHFARLKDN--------GREVVVKVLRPDILPVIDADLALMYRLARWVE---RLLPDGRRLKPREVVAEF  193 (537)
T ss_pred             hhhcCCCccEEEEEEECCC--------CCEEEEEEeCcchHHHHHHHHHHHHHHHHHHH---HhCcccccCCHHHHHHHH
Confidence            6899999999999998555        8999999999875321110        01110   000000011222222   


Q ss_pred             ------HHHHHHHHHHHHHhhhC-----CCCcccccc--ccceEEEEcccCccccccccc---ccCCCCHHHHHHHHHHH
Q psy10135        110 ------RTWAEKEMRNLTRMYSE-----GLNVPKPIL--LKSHVLLMTFIGEDGWPAAKL---KDTPLTESGACKLYREC  173 (351)
Q Consensus       110 ------k~~aekE~~nL~rL~~~-----gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L---~~~~l~~~~~~~l~~ql  173 (351)
                            .+...+|.+|+.+++..     .+.+|+++.  ....+|||||+  +|.++..+   .......   ..+....
T Consensus       194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i--~G~~l~d~~~l~~~g~d~---~~la~~~  268 (537)
T PRK04750        194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERM--YGIPVSDVAALRAAGTDM---KLLAERG  268 (537)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeee--cCccHHhHHHHHhcCCCH---HHHHHHH
Confidence                  23356788999998643     478999985  47789999999  57655432   2222221   2233333


Q ss_pred             HH-HHHHHHhhCCccccCCCCCceEEe-CC----eEEEEEccccccCCCC-------ChHHHHHhhhhhhhhcc
Q psy10135        174 VV-MMWRLYNKCHLVHADLSEYNMLVH-KA----TLFIIDVAQSVEHDHP-------HALQFLRKDCDNVTVFV  234 (351)
Q Consensus       174 l~-~L~~LH~~~glVH~DLkp~NILi~-~g----~l~IIDFG~Av~~~~p-------~a~~fl~~D~~~v~~ff  234 (351)
                      +. .+..++ +.|++|||+||.||++. +|    +++++|||++...+..       ....++.+|...+.+-+
T Consensus       269 v~~~~~Qif-~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~  341 (537)
T PRK04750        269 VEVFFTQVF-RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELH  341 (537)
T ss_pred             HHHHHHHHH-hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            22 234455 58999999999999995 45    8999999999877532       12355677776666544

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.60  E-value=4.3e-15  Score=136.51  Aligned_cols=143  Identities=17%  Similarity=0.091  Sum_probs=101.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|++|.||+|.+...     .+....||||.++.....                         .......+|+..|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~-----~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~e~~~l   50 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTS-----GGKVIPVAVKCLKSDKLS-------------------------DIMDDFLKEAAIM   50 (257)
T ss_pred             CcCCccCcccEEeeeEecC-----CCCceEEEEeecCCcccH-------------------------HHHHHHHHHHHHH
Confidence            3689999999999987331     111337999998763221                         0111234688899


Q ss_pred             HHhhhCCCC-ccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMYSEGLN-VPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .++.+.++. +...+.....++||||+. .|.....+.+   ..++...+..++.|++.+|.+|| ..|++|+||+|.||
T Consensus        51 ~~l~h~~iv~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH-~~~i~H~di~p~ni  128 (257)
T cd05040          51 HSLDHENLIRLYGVVLTHPLMMVTELAP-LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE-SKRFIHRDLAARNI  128 (257)
T ss_pred             hhcCCCCccceeEEEcCCeEEEEEEecC-CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH-hCCccccccCcccE
Confidence            999776632 222222245679999995 3443333333   24677888999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEccccccCC
Q psy10135        197 LVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~~~  215 (351)
                      |+. ++.++|+|||.+....
T Consensus       129 l~~~~~~~kl~dfg~~~~~~  148 (257)
T cd05040         129 LLASDDKVKIGDFGLMRALP  148 (257)
T ss_pred             EEecCCEEEecccccccccc
Confidence            995 6899999999987553

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=5.8e-15  Score=136.10  Aligned_cols=140  Identities=24%  Similarity=0.218  Sum_probs=93.7

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|++|.||+|.+..+        |+.||||+++........                     ......  .|...+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~--------~~~vavK~~~~~~~~~~~---------------------~~~~~~--~e~~~~   50 (260)
T cd05611           2 KPISKGAFGSVYLAKKRST--------GDYFAIKVLKKSDMIAKN---------------------QVTNVK--AERAIM   50 (260)
T ss_pred             ccCCcCCCeeEEEEEecCC--------CCeEEEEEecchhhhHHH---------------------HHHHHH--HHHHHH
Confidence            5689999999999998666        899999998753211100                     001111  222222


Q ss_pred             HH-hhhCC-CCccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TR-MYSEG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~r-L~~~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .. +.+.+ +++...+.. ...++||||++ +|.....+.. ..++...+..++.|++.+|.+|| ..|++|+||+|.||
T Consensus        51 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH-~~~i~H~dl~p~ni  128 (260)
T cd05611          51 MIQGESPYVAKLYYSFQSKDYLYLVMEYLN-GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLH-QRGIIHRDIKPENL  128 (260)
T ss_pred             hhcCCCCCeeeeeeeEEcCCeEEEEEeccC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHe
Confidence            22 22222 122222212 34579999995 3333333332 35788888999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEcccccc
Q psy10135        197 LVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~  213 (351)
                      |+. ++.++|+|||.+..
T Consensus       129 l~~~~~~~~l~dfg~~~~  146 (260)
T cd05611         129 LIDQTGHLKLTDFGLSRN  146 (260)
T ss_pred             EECCCCcEEEeeccccee
Confidence            995 57899999998854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG1164|consensus

Probab=99.60  E-value=6.2e-15  Score=143.12  Aligned_cols=143  Identities=18%  Similarity=0.208  Sum_probs=103.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.|.+.||+|+||.||+|.+...       ....+|+|+-.......                     +.     ....
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~-------~~~~~a~K~e~~~~~~~---------------------~~-----~l~~   65 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSE-------KNKEYAKKLEKKELGSK---------------------PS-----VLKI   65 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCC-------CCeeEEEEEEEecccCC---------------------Cc-----cchh
Confidence            599999999999999999998433       03579999876521100                     00     0134


Q ss_pred             HHHHHHHhhh--CCCCcccccccc-----ceEEEEcccCcccccccc-cccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYS--EGLNVPKPILLK-----SHVLLMTFIGEDGWPAAK-LKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~--~gi~vP~pi~~~-----~~vLVMEfig~~G~~~~~-L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |...|..+..  ....+|..+..+     .++|||+.+|.+-..+.. .....++...+..++.|++.+|..|| ..|+|
T Consensus        66 E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH-~~G~i  144 (322)
T KOG1164|consen   66 EIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH-SKGFI  144 (322)
T ss_pred             HHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH-hcCcc
Confidence            6777777763  224566666544     368999999632221111 11245888899999999999999999 59999


Q ss_pred             ccCCCCCceEEeC------CeEEEEEccccc
Q psy10135        188 HADLSEYNMLVHK------ATLFIIDVAQSV  212 (351)
Q Consensus       188 H~DLkp~NILi~~------g~l~IIDFG~Av  212 (351)
                      ||||||.|+++..      ..++|+|||+|.
T Consensus       145 HRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  145 HRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             cCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            9999999999942      369999999998

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.60  E-value=7.8e-15  Score=137.70  Aligned_cols=149  Identities=19%  Similarity=0.211  Sum_probs=102.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|++|.||+|.....     ...+..||||+++.....-..                      ........|
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~-----~~~~~~~avk~~~~~~~~~~~----------------------~~~~~~~~E   54 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGG-----HDAGKLYAMKVLKKATIVQKA----------------------KTAEHTRTE   54 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEecc-----ccCCcEEEEEEEehHHHHhhh----------------------hHHHHHHHH
Confidence            78899999999999999975211     012788999998753211000                      011123457


Q ss_pred             HHHHHHhh-hCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++. +.++ ++...+.. ...+|||||+. +|.+...+. ...++...+..++.|++.+|.+|| ..|++|+||+
T Consensus        55 ~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~~~H~dl~  132 (288)
T cd05583          55 RQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVN-GGELFTHLYQREHFTESEVRVYIAEIVLALDHLH-QLGIIYRDIK  132 (288)
T ss_pred             HHHHHhccCCcchhhhheeeecCCEEEEEEecCC-CCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHH-HCCeeccCCC
Confidence            88888884 3332 11111222 34579999995 444433333 235777888889999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.||++. ++.++|+|||.+...
T Consensus       133 p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583         133 LENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             HHHeEECCCCCEEEEECcccccc
Confidence            9999995 678999999988653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.60  E-value=8.1e-15  Score=141.40  Aligned_cols=151  Identities=16%  Similarity=0.087  Sum_probs=100.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.|++.||+|+||.||.|.+... .......+..||||+++.....                         .......+
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~-~~~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~   66 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGI-DKDKPNKPVTVAVKMLKDDATD-------------------------KDLSDLVS   66 (334)
T ss_pred             HeeecceeccccCCcEEEEEEecc-CCccCCcceeEEEEEcccccCH-------------------------HHHHHHHH
Confidence            488999999999999999975221 0000001347999988742100                         00112346


Q ss_pred             HHHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECVV  175 (351)
Q Consensus       116 E~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll~  175 (351)
                      |+..+.++ .+.+| .+...+. ....++||||++ .|.....+.                 ...++...+..++.|++.
T Consensus        67 E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~  145 (334)
T cd05100          67 EMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYAS-KGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVAR  145 (334)
T ss_pred             HHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCC-CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHH
Confidence            78888888 44443 2211111 234689999996 443322222                 123556677889999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.+|| ..|+||+||||.|||+. ++.++|+|||.+...
T Consensus       146 al~~LH-~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~  184 (334)
T cd05100         146 GMEYLA-SQKCIHRDLAARNVLVTEDNVMKIADFGLARDV  184 (334)
T ss_pred             HHHHHH-HCCeeccccccceEEEcCCCcEEECCcccceec
Confidence            999999 59999999999999995 688999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.60  E-value=7.5e-15  Score=136.39  Aligned_cols=148  Identities=19%  Similarity=0.135  Sum_probs=100.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.....   .....+..||||++......                       .  ......+|
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~~~~aik~~~~~~~~-----------------------~--~~~~~~~e   59 (277)
T cd05032           8 ITLIRELGQGSFGMVYEGLAKGV---VKGEPETRVAIKTVNENASM-----------------------R--ERIEFLNE   59 (277)
T ss_pred             eeEEeEecCCCCceEEEEEEecc---CCCCcceeEEEEecCCccCH-----------------------H--HHHHHHHH
Confidence            77889999999999999987322   00011478999997642100                       0  01122357


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-----------CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----------TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----------~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ...|.++.+.++ ++...+. ....++||||+. .|.....+..           ..++...+..++.|++.+|.+|| .
T Consensus        60 ~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~  137 (277)
T cd05032          60 ASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMA-KGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA-A  137 (277)
T ss_pred             HHHHHhCCCCceeEEEEEEcCCCCcEEEEecCC-CCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH-h
Confidence            777887765542 1111111 244689999995 3433222221           12556678889999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|++|+||||.|||+. ++.++|+|||.+...
T Consensus       138 ~~i~H~di~p~nill~~~~~~kl~dfg~~~~~  169 (277)
T cd05032         138 KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDI  169 (277)
T ss_pred             CCccccccChheEEEcCCCCEEECCcccchhh
Confidence            9999999999999995 689999999998643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.60  E-value=7.5e-15  Score=153.37  Aligned_cols=150  Identities=16%  Similarity=0.153  Sum_probs=89.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+    ....+..||||.++....    ...++.  .++++            .    
T Consensus       133 ~y~l~~~LG~G~FG~VYka~~~~~----~~~~~~~vAvK~~~~~~~----~e~~~~--e~l~~------------~----  186 (566)
T PLN03225        133 DFVLGKKLGEGAFGVVYKASLVNK----QSKKEGKYVLKKATEYGA----VEIWMN--ERVRR------------A----  186 (566)
T ss_pred             CeEEeEEEeeCCCeEEEEEEEcCC----ccccCcEEEEEEecccch----hHHHHH--HHHHh------------h----
Confidence            389999999999999999998321    001267899998754210    000000  00000            0    


Q ss_pred             HHHHHHHhhhCCCCcccc-ccccceEEEEcccCcccccccccccCC---------------------CCHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKP-ILLKSHVLLMTFIGEDGWPAAKLKDTP---------------------LTESGACKLYREC  173 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~p-i~~~~~vLVMEfig~~G~~~~~L~~~~---------------------l~~~~~~~l~~ql  173 (351)
                      ...+...+.. ++..+.. -.....+|||||++ .|.....+....                     .....+..++.||
T Consensus       187 ~~~~~~~~~~-~~~~~~~~~~~~~~~LV~ey~~-~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~ql  264 (566)
T PLN03225        187 CPNSCADFVY-GFLEPVSSKKEDEYWLVWRYEG-ESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQI  264 (566)
T ss_pred             chhhHHHHHH-hhhcccccccCCceEEEEEecC-CCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHH
Confidence            0000000000 1111111 12245689999996 343322222111                     1123356789999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| ..|||||||||.|||++  ++.++|+|||.|...
T Consensus       265 l~aL~yLH-~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l  306 (566)
T PLN03225        265 LFALDGLH-STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADL  306 (566)
T ss_pred             HHHHHHHH-HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccc
Confidence            99999999 58999999999999996  368999999999643

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.60  E-value=6.7e-15  Score=136.62  Aligned_cols=140  Identities=14%  Similarity=0.077  Sum_probs=93.6

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|.....      .....+|+|.++....                         ........+|+..+
T Consensus         1 ~~lg~G~fg~v~~~~~~~~------~~~~~~~~k~~~~~~~-------------------------~~~~~~~~~e~~~~   49 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRG------MSKARVVVKELRASAT-------------------------PDEQLLFLQEVQPY   49 (269)
T ss_pred             CcCCccCCceEEEEEEecC------CCCeEEEEeecCccCC-------------------------hHHHHHHHHHHHHH
Confidence            3689999999999965221      0145688887653210                         01112234577778


Q ss_pred             HHhhhCCCC-ccccc-cccceEEEEcccCcccccccccccC------CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        121 TRMYSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLKDT------PLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~------~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+.+.+|. +...+ .....+|||||+. .|.....+...      .++...+..++.||+.+|.+|| .+|+||||||
T Consensus        50 ~~l~h~nii~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlk  127 (269)
T cd05042          50 RELNHPNVLQCLGQCIESIPYLLVLEFCP-LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH-QADFIHSDLA  127 (269)
T ss_pred             HhCCCCCcceEEEEECCCCceEEEEEeCC-CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH-hcCEeccccc
Confidence            777665531 11111 1244689999995 44443333321      1345567889999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ ++.++|+|||.+..
T Consensus       128 p~Nill~~~~~~kl~dfg~~~~  149 (269)
T cd05042         128 LRNCQLTADLSVKIGDYGLALE  149 (269)
T ss_pred             HhheEecCCCcEEEeccccccc
Confidence            9999995 58899999999854

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.60  E-value=8.9e-15  Score=137.42  Aligned_cols=148  Identities=16%  Similarity=0.136  Sum_probs=101.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||+|++|.||+|.....   ........+|+|+++.....                       . . .....+|
T Consensus        14 ~~~~~~ig~g~~g~v~~~~~~~~---~~~~~~~~~a~k~~~~~~~~-----------------------~-~-~~~~~~E   65 (293)
T cd05053          14 LTLGKPLGEGAFGQVVKAEAVGL---DNPNETSTVAVKMLKDDATE-----------------------K-D-LSDLVSE   65 (293)
T ss_pred             eEEeeEecccccccEEEEEEecC---CCCCCceeEEEEEccCCCCH-----------------------H-H-HHHHHHH
Confidence            78889999999999999986322   00011467999988642100                       0 0 0113457


Q ss_pred             HHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECVVM  176 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll~~  176 (351)
                      +..+.++ .+.++ .....+. ....+++|||+. .|.....+.                 ...++...+..++.|++.+
T Consensus        66 ~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  144 (293)
T cd05053          66 MEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAA-HGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARG  144 (293)
T ss_pred             HHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCC-CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            7888888 34432 2211111 134579999996 343322221                 1246777888999999999


Q ss_pred             HHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        177 MWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       177 L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|| ..||||+||||.|||+. ++.++|+|||.+...
T Consensus       145 l~~LH-~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~  182 (293)
T cd05053         145 MEFLA-SKKCIHRDLAARNVLVTEDHVMKIADFGLARDI  182 (293)
T ss_pred             HHHHH-HCCccccccceeeEEEcCCCeEEeCcccccccc
Confidence            99999 59999999999999995 688999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.60  E-value=5.2e-15  Score=140.65  Aligned_cols=143  Identities=16%  Similarity=0.164  Sum_probs=102.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.....||.|+||.||+|.+..+        +..||||++......                         . .....+
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~--------~~~v~iK~~~~~~~~-------------------------~-~~~~~~   67 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHS--------GRQVAVKMMDLRKQQ-------------------------R-RELLFN   67 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCC--------CCEEEEEEEEecccc-------------------------h-HHHHHH
Confidence            355556899999999999998556        899999998542100                         0 011235


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |...|..+.+.++ .....+. ....++||||+. +|.....+....++...+..++.|++.+|.+|| ..|++|+||+|
T Consensus        68 e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH-~~~ivH~dl~p  145 (297)
T cd06659          68 EVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ-GGALTDIVSQTRLNEEQIATVCESVLQALCYLH-SQGVIHRDIKS  145 (297)
T ss_pred             HHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC-CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCH
Confidence            6667777765542 1111111 245689999995 333333334456788889999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||.+...
T Consensus       146 ~Nill~~~~~~kL~dfg~~~~~  167 (297)
T cd06659         146 DSILLTLDGRVKLSDFGFCAQI  167 (297)
T ss_pred             HHeEEccCCcEEEeechhHhhc
Confidence            999995 689999999988543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.60  E-value=5e-15  Score=138.44  Aligned_cols=148  Identities=18%  Similarity=0.127  Sum_probs=99.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|....+   .....+..||||+++.....                         ........|
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~---~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~e   58 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGT---APGEQTQAVAIKTLKDKAEG-------------------------PLREEFKHE   58 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecC---CCCCceeEEEEEEccCCCCH-------------------------HHHHHHHHH
Confidence            67789999999999999986321   00112578999998642100                         011123457


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECVVMM  177 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll~~L  177 (351)
                      ...+..+.+.+| .+...+. ....+++|||+. .+.....+.                 ...++...+..++.|++.+|
T Consensus        59 ~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL  137 (283)
T cd05091          59 AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCS-HSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGM  137 (283)
T ss_pred             HHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCC-CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            777777766553 2211111 134578999985 222111110                 12366777889999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .++| .+|++||||||.|||+. ++.++|+|||.+...
T Consensus       138 ~~lH-~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  174 (283)
T cd05091         138 EFLS-SHHVVHKDLATRNVLVFDKLNVKISDLGLFREV  174 (283)
T ss_pred             HHHH-HcCccccccchhheEecCCCceEeccccccccc
Confidence            9999 59999999999999995 578999999988654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0671|consensus

Probab=99.60  E-value=3.2e-15  Score=145.98  Aligned_cols=140  Identities=20%  Similarity=0.248  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|.+.+|+|.||.|-.+.++..        +..|||||+|.-       .+|                    +-.|.-|
T Consensus        91 y~i~~~lGeGtFGkV~ec~D~~~--------~~~vAlKIik~V-------~kY--------------------reAa~iE  135 (415)
T KOG0671|consen   91 YEIVDLLGEGTFGKVVECWDRET--------KEHVALKIIKNV-------DKY--------------------REAALIE  135 (415)
T ss_pred             eehhhhhcCCcccceEEEeecCC--------CceehHHHHHHH-------HHH--------------------hhHHHHH
Confidence            78889999999999999999776        899999999851       122                    2245678


Q ss_pred             HHHHHHhhhCC----CCcccc---ccccce-EEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        117 MRNLTRMYSEG----LNVPKP---ILLKSH-VLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       117 ~~nL~rL~~~g----i~vP~p---i~~~~~-vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      +..|.+|.+..    ..|...   +++..| |||+|.+|  -.....|+.   .+++...++.+..||+.++..|| ..+
T Consensus       136 i~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG--~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh-~~k  212 (415)
T KOG0671|consen  136 IEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG--LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH-DLK  212 (415)
T ss_pred             HHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC--hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH-hcc
Confidence            99999996531    334333   444444 79999995  233444554   25778899999999999999999 599


Q ss_pred             ccccCCCCCceEEeCC---------------------eEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVHKA---------------------TLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~~g---------------------~l~IIDFG~Av~~  214 (351)
                      |||-||||+|||+.+.                     .++|||||.|+..
T Consensus       213 l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~  262 (415)
T KOG0671|consen  213 LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFD  262 (415)
T ss_pred             eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCccee
Confidence            9999999999998311                     4899999999643

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.59  E-value=1e-14  Score=135.53  Aligned_cols=146  Identities=16%  Similarity=0.195  Sum_probs=103.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+...||.|+||.||+|.....   ......+.+|+|++.....      .                   ........
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~~~~~~k~~~~~~~------~-------------------~~~~~~~~   57 (275)
T cd05046           6 NLQEITTLGRGEFGEVFLAKAKGI---EEEGGETLVLVKALQKTKD------E-------------------NLQSEFRR   57 (275)
T ss_pred             hceeeeeecccceeEEEEEEeccC---CcCCCcceEEEEccCCccc------h-------------------HHHHHHHH
Confidence            367889999999999999986322   0111256799998754210      0                   01122356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-C---------CCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-T---------PLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~---------~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      |++.|.++.+.++  ++.+..    ...++||||+. .|.....+.. .         .++...+..++.||+.+|.+||
T Consensus        58 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH  134 (275)
T cd05046          58 ELDMFRKLSHKNV--VRLLGLCREAEPHYMILEYTD-LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS  134 (275)
T ss_pred             HHHHHHhcCCcce--eeeEEEECCCCcceEEEEecC-CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh
Confidence            8889999976653  222222    34689999995 3333222222 1         4778889999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                       .+|++|+||||.|||+. ++.++|.|||.+..
T Consensus       135 -~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~  166 (275)
T cd05046         135 -NARFVHRDLAARNCLVSSQREVKVSLLSLSKD  166 (275)
T ss_pred             -hcCcccCcCccceEEEeCCCcEEEcccccccc
Confidence             59999999999999995 68899999998753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.59  E-value=1e-14  Score=137.45  Aligned_cols=145  Identities=21%  Similarity=0.136  Sum_probs=101.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.....   .....+..+|+|.++....                          .......+|
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~~~~~~k~~~~~~~--------------------------~~~~~~~~e   57 (291)
T cd05094           7 IVLKRELGEGAFGKVFLAECYNL---SPTKDKMLVAVKALKDPTL--------------------------AARKDFQRE   57 (291)
T ss_pred             eEEeeeecccCCCeEEEeEeecc---CCCCcceeeEEEecCCccH--------------------------HHHHHHHHH
Confidence            77889999999999999975211   0011156789998764211                          011224568


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECVV  175 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll~  175 (351)
                      +..+.++.+.++  .+.+.    ....++||||+. +|.....+.                 ...++...+..++.||+.
T Consensus        58 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~  134 (291)
T cd05094          58 AELLTNLQHEHI--VKFYGVCGDGDPLIMVFEYMK-HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS  134 (291)
T ss_pred             HHHHhcCCCCCc--ceEEEEEccCCceEEEEecCC-CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHH
Confidence            888998877653  22222    144689999995 332221111                 123677788999999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ++.+|| ..|++|+||||.|||+. ++.++|+|||.|...
T Consensus       135 al~~lH-~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~  173 (291)
T cd05094         135 GMVYLA-SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV  173 (291)
T ss_pred             HHHHHH-hCCeeecccCcceEEEccCCcEEECCCCccccc
Confidence            999999 59999999999999995 688999999998643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.59  E-value=2.4e-14  Score=119.26  Aligned_cols=130  Identities=24%  Similarity=0.257  Sum_probs=99.7

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.+.||.|.++.||++.. .         +..++||+++....                            ......|+.
T Consensus         2 ~~~~i~~g~~~~v~~~~~-~---------~~~~~iK~~~~~~~----------------------------~~~~~~e~~   43 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGT-K---------DEDYVLKINPSREK----------------------------GADREREVA   43 (155)
T ss_pred             cceecccccccceEEEEe-c---------CCeEEEEecCCCCc----------------------------hhHHHHHHH
Confidence            457899999999999987 3         56899998865311                            112346888


Q ss_pred             HHHHhhhCCCCcccccccc----ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhh--CCccccCCC
Q psy10135        119 NLTRMYSEGLNVPKPILLK----SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNK--CHLVHADLS  192 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~~~----~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~--~glVH~DLk  192 (351)
                      .+.+|.+.++++|.++...    ..+++|||+.  |..+..+     +......+..+++.++..||.-  .|++|+||+
T Consensus        44 ~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~--g~~~~~~-----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~  116 (155)
T cd05120          44 ILQLLARKGLPVPKVLASGESDGWSYLLMEWIE--GETLDEV-----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLH  116 (155)
T ss_pred             HHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC--CeecccC-----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence            8999977667788887653    4789999994  5443322     4455678899999999999942  379999999


Q ss_pred             CCceEEeC-CeEEEEEcccccc
Q psy10135        193 EYNMLVHK-ATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~~-g~l~IIDFG~Av~  213 (351)
                      |.|||+.. +.++++|||.|..
T Consensus       117 ~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120         117 PGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             cceEEEECCcEEEEEecccccC
Confidence            99999975 8999999999863

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.59  E-value=8e-15  Score=140.46  Aligned_cols=145  Identities=19%  Similarity=0.134  Sum_probs=105.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        |..+|||++.......                     . .. .....+|
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~--------~~~valK~~~~~~~~~---------------------~-~~-~~~~~~e   75 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRT--------NEVVAIKKMSYSGKQS---------------------N-EK-WQDIIKE   75 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCC--------CcEEEEEEEecCCCCc---------------------h-HH-HHHHHHH
Confidence            77889999999999999998556        8999999886421100                     0 01 1123468


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++.+.++ +....+. ....+|||||++  |.....+.  ..+++..++..++.+++.+|.+|| ..|++|+||+
T Consensus        76 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~i~H~dL~  152 (317)
T cd06635          76 VKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL--GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH-SHNMIHRDIK  152 (317)
T ss_pred             HHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCC
Confidence            888888876553 2222221 244679999994  54333332  235788888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.||++. ++.++|+|||.+....
T Consensus       153 p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         153 AGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             cccEEECCCCCEEEecCCCccccC
Confidence            9999995 5889999999886543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.59  E-value=8.5e-15  Score=136.12  Aligned_cols=140  Identities=17%  Similarity=0.113  Sum_probs=96.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|.....      ..+..+|+|.++....                         ........+|...+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~------~~~~~~~~k~~~~~~~-------------------------~~~~~~~~~E~~~l   49 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSG------YTPAQVVVKELRVSAS-------------------------VQEQMKFLEEAQPY   49 (269)
T ss_pred             CcccccCCceEEEEEEcCC------CCceEEEEEecCCCCC-------------------------hHHHHHHHHHHHHH
Confidence            3689999999999975221      0156799998765310                         01122345688899


Q ss_pred             HHhhhCCC-Cccccc-cccceEEEEcccCccccccccccc------CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        121 TRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLKD------TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~------~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      .++.+.++ ++...+ .....++||||+. .|.....+..      ..++...+..+..|++.++.+|| ..|++|+|||
T Consensus        50 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dlk  127 (269)
T cd05087          50 RSLQHSNLLQCLGQCTEVTPYLLVMEFCP-LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH-KNNFIHSDLA  127 (269)
T ss_pred             HhCCCCCEeeEEEEEcCCCCcEEEEECCC-CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH-HCCEeccccC
Confidence            99877653 221111 1244689999995 3433333321      12345566788999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||+. ++.++|+|||.+..
T Consensus       128 p~nil~~~~~~~kL~dfg~~~~  149 (269)
T cd05087         128 LRNCLLTADLTVKIGDYGLSHN  149 (269)
T ss_pred             cceEEEcCCCcEEECCcccccc
Confidence            9999995 57899999998853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.59  E-value=1.9e-14  Score=135.39  Aligned_cols=143  Identities=16%  Similarity=0.087  Sum_probs=104.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|.+|.||+|.+..+        ++.+|+|++......                         .......+|
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~--------~~~~~~k~~~~~~~~-------------------------~~~~~~~~e   49 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLKNT--------GMIFALKTITTDPNP-------------------------DLQKQILRE   49 (287)
T ss_pred             eEEEEEeccCCceEEEEEEECCC--------CeEEEEEEEecCCch-------------------------HHHHHHHHH
Confidence            67788999999999999998556        899999998753110                         001112458


Q ss_pred             HHHHHHhhhCCCCc-ccccc---ccceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        117 MRNLTRMYSEGLNV-PKPIL---LKSHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi~---~~~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      +..|.++.+.+|.. ...+.   ....+|||||++ +|.....+     ....++...+..++.+|+.+|.+|| ..|++
T Consensus        50 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH-~~~i~  127 (287)
T cd06621          50 LEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCE-GGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH-SRKII  127 (287)
T ss_pred             HHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecC-CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcc
Confidence            88999998776422 11111   124689999995 33221111     1234777888899999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+||+|.||++. ++.++|+|||.+...
T Consensus       128 H~dl~~~nil~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621         128 HRDIKPSNILLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             cCCCCHHHEEEecCCeEEEeeccccccc
Confidence            999999999995 578999999998654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.59  E-value=1.1e-14  Score=139.26  Aligned_cols=149  Identities=14%  Similarity=0.062  Sum_probs=100.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|..... .......+..+|+|+++.....                       . . ......
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~-~~~~~~~~~~~aiK~~~~~~~~-----------------------~-~-~~~~~~   66 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGI-DKSRPDQTVTVAVKMLKDNATD-----------------------K-D-LADLIS   66 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeeccc-CCccCCcceEEEEEecCCCCCh-----------------------H-H-HHHHHH
Confidence            377899999999999999975211 0000011457999988642100                       0 0 011245


Q ss_pred             HHHHHHHhh-hCCCCcccccc----ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHH
Q psy10135        116 EMRNLTRMY-SEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYREC  173 (351)
Q Consensus       116 E~~nL~rL~-~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~ql  173 (351)
                      |...+.++. +.+|  .+.+.    ....++||||+. .|.....+.                 ...++..++..++.||
T Consensus        67 E~~~l~~l~~h~~i--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  143 (314)
T cd05099          67 EMELMKLIGKHKNI--INLLGVCTQEGPLYVIVEYAA-KGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQV  143 (314)
T ss_pred             HHHHHHhccCCCCe--eeEEEEEccCCceEEEEecCC-CCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHH
Confidence            777888773 4442  22222    134679999995 343322221                 1236677788899999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| .+|++|+||||.|||+. ++.++|+|||.|...
T Consensus       144 ~~aL~~lH-~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~  184 (314)
T cd05099         144 ARGMEYLE-SRRCIHRDLAARNVLVTEDNVMKIADFGLARGV  184 (314)
T ss_pred             HHHHHHHH-HCCeeeccccceeEEEcCCCcEEEccccccccc
Confidence            99999999 59999999999999995 688999999999654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.59  E-value=5.1e-15  Score=142.52  Aligned_cols=155  Identities=18%  Similarity=0.104  Sum_probs=106.8

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.+.||.|++|.||+|.+..+        |+.||||+++...... ...       +.++.+    ..........+|+
T Consensus        12 ~~~~~ig~G~~g~vy~~~~~~~--------~~~vaiK~~~~~~~~~-~~~-------~~~~~~----~~~~~~~~~~~E~   71 (335)
T PTZ00024         12 QKGAHLGEGTYGKVEKAYDTLT--------GKIVAIKKVKIIEISN-DVT-------KDRQLV----GMCGIHFTTLREL   71 (335)
T ss_pred             hhhhcccCCCceeEEEEEECCC--------CCeEEEEEeecccccc-ccc-------cchhhh----cccccchhHHHHH
Confidence            4568899999999999998556        8999999987532111 000       000000    0000112235788


Q ss_pred             HHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        118 RNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       118 ~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      ..|.++.+.++ .+...+. ....++||||++  |.....+.. ..++...+..++.|++.+|.+|| ..|++|+||+|.
T Consensus        72 ~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH-~~~i~H~dl~~~  148 (335)
T PTZ00024         72 KIMNEIKHENIMGLVDVYVEGDFINLVMDIMA--SDLKKVVDRKIRLTESQVKCILLQILNGLNVLH-KWYFMHRDLSPA  148 (335)
T ss_pred             HHHHhCCCcceeeeeEEEecCCcEEEEEeccc--cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeecccccHH
Confidence            89999876653 2222221 244689999994  544433332 35788889999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccCC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||++. ++.++|+|||.+....
T Consensus       149 nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        149 NIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             HeEECCCCCEEECCccceeecc
Confidence            99995 5789999999986544

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.59  E-value=1.2e-14  Score=133.04  Aligned_cols=138  Identities=20%  Similarity=0.175  Sum_probs=99.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|++|.||+|.+ ..        ++.||+|+++.....                         ........|+..+
T Consensus         1 ~~lg~g~~g~v~~~~~-~~--------~~~v~~K~~~~~~~~-------------------------~~~~~~~~e~~~l   46 (251)
T cd05041           1 EKIGKGNFGDVYKGVL-KG--------NTEVAVKTCRSTLPP-------------------------DLKRKFLQEAEIL   46 (251)
T ss_pred             CccccCCCceEEEEEE-eC--------CCcEEEEeccccCCH-------------------------HHHHHHHHHHHHH
Confidence            4689999999999998 55        789999988653210                         0111234578888


Q ss_pred             HHhhhCCCCccccc--cccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMYSEGLNVPKPI--LLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~~~gi~vP~pi--~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      +++.+.++.....+  .....++||||+. ++.....+..  ..++...+..+..+++.++.+|| ..|++|+||+|.||
T Consensus        47 ~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH-~~~i~h~di~p~ni  124 (251)
T cd05041          47 KQYDHPNIVKLIGVCVQKQPIYIVMELVP-GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE-SKNCIHRDLAARNC  124 (251)
T ss_pred             HhCCCCCeEEEEEEEecCCCeEEEEEcCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCEehhhcCcceE
Confidence            88877654221111  1245689999994 2333223322  34677788899999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEccccccC
Q psy10135        197 LVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~~  214 (351)
                      |+. ++.++|+|||.+...
T Consensus       125 li~~~~~~~l~d~g~~~~~  143 (251)
T cd05041         125 LVGENNVLKISDFGMSREE  143 (251)
T ss_pred             EEcCCCcEEEeeccccccc
Confidence            995 688999999998644

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.59  E-value=8.6e-15  Score=135.65  Aligned_cols=152  Identities=17%  Similarity=0.227  Sum_probs=103.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+       .++.+|+|.++.....+.....               . +.........|
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~-------~~~~~avk~~~~~~~~~~~~~~---------------~-~~~~~~~~~~e   58 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNN-------GQNLLALKEINVHNPAFGKDKR---------------E-RDKSIGDIVSE   58 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCC-------CCceeeeeEeeccccccccccc---------------c-chHHHHHHHHH
Confidence            67889999999999999998541       1789999998764332211000               0 00111122346


Q ss_pred             HHHHHH-hhhCCCCcccccc----ccceEEEEcccCcccccccc-c-----ccCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        117 MRNLTR-MYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAK-L-----KDTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       117 ~~nL~r-L~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~-L-----~~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      +..+.+ +.+.++  +..+.    ....++||||+.  |.++.. +     ....++...+..++.+++.+|.+||...|
T Consensus        59 ~~~l~~~~~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  134 (269)
T cd08528          59 VTIIKEQLRHPNI--VRYYKTFLENDRLYIVMDLIE--GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR  134 (269)
T ss_pred             HHHHhhcCCCCCe--eeEEeeEccCCeEEEEEecCC--CCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc
Confidence            666654 344332  22222    255689999994  433322 1     12357888889999999999999995478


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ++|+||+|.|||+. ++.++|+|||.+....
T Consensus       135 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  165 (269)
T cd08528         135 IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQ  165 (269)
T ss_pred             eeecCCCHHHEEECCCCcEEEecccceeecc
Confidence            99999999999994 6889999999986544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.59  E-value=9.8e-15  Score=137.37  Aligned_cols=148  Identities=18%  Similarity=0.123  Sum_probs=100.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++...||.|+||.||+|.....   ........+|+|+++.....                       ...  .....|
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~~~~~~k~~~~~~~~-----------------------~~~--~~~~~E   53 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRL---KGRAGYTTVAVKMLKENASS-----------------------SEL--RDLLSE   53 (290)
T ss_pred             ccccccccCcCCcceEEEEEecC---CCCCcceeEEEEecCCCCCH-----------------------HHH--HHHHHH
Confidence            57889999999999999986321   00111457999987642110                       000  113468


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-------------------------CCCCHHHHHHH
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-------------------------TPLTESGACKL  169 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-------------------------~~l~~~~~~~l  169 (351)
                      +..|.++.+.+| +....+. ....++||||+. .|.....+..                         ..++...+..+
T Consensus        54 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  132 (290)
T cd05045          54 FNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAK-YGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISF  132 (290)
T ss_pred             HHHHhhCCCCCEeeEEEEEecCCCcEEEEEecC-CCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHH
Confidence            888888876653 2221111 244689999995 3332211110                         13667778899


Q ss_pred             HHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        170 YRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       170 ~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.|++.+|.+|| ..|+|||||||.|||+. ++.++|+|||.+...
T Consensus       133 ~~~i~~~l~~LH-~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~  177 (290)
T cd05045         133 AWQISRGMQYLA-EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDV  177 (290)
T ss_pred             HHHHHHHHHHHH-HCCeehhhhhhheEEEcCCCcEEeccccccccc
Confidence            999999999999 59999999999999995 578999999998643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PHA02988 hypothetical protein; Provisional

Probab=99.58  E-value=1.2e-14  Score=137.53  Aligned_cols=137  Identities=21%  Similarity=0.272  Sum_probs=101.1

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||+|+++.||+|..  +        |+.||||.++....   ..                   . .......+|+..|
T Consensus        26 ~~i~~g~~~~v~~~~~--~--------~~~vavK~~~~~~~---~~-------------------~-~~~~~~~~E~~~l   72 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--N--------NKEVIIRTFKKFHK---GH-------------------K-VLIDITENEIKNL   72 (283)
T ss_pred             eEEeeCCceEEEEEEE--C--------CEEEEEEecccccc---cc-------------------H-HHHHHHHHHHHHH
Confidence            5799999999999987  4        88999999875311   00                   0 1112245789999


Q ss_pred             HHhhhCCCCcccccc--------ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        121 TRMYSEGLNVPKPIL--------LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~--------~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      .++.+.+|  .+.+.        ....+|||||+. .|.+...+.. ..++......++.+++.+|.+||...+++||||
T Consensus        73 ~~l~h~nI--v~~~g~~~~~~~~~~~~~lv~Ey~~-~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdl  149 (283)
T PHA02988         73 RRIDSNNI--LKIYGFIIDIVDDLPRLSLILEYCT-RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNL  149 (283)
T ss_pred             HhcCCCCE--EEEeeeEEecccCCCceEEEEEeCC-CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcC
Confidence            99987653  22221        124579999996 4444434433 346777788999999999999996469999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||.|||++ ++.++|+|||.+..
T Consensus       150 kp~nill~~~~~~kl~dfg~~~~  172 (283)
T PHA02988        150 TSVSFLVTENYKLKIICHGLEKI  172 (283)
T ss_pred             ChhhEEECCCCcEEEcccchHhh
Confidence            99999995 68999999999864

>KOG0578|consensus

Probab=99.58  E-value=5.9e-15  Score=149.79  Aligned_cols=144  Identities=17%  Similarity=0.199  Sum_probs=103.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.....||+|+-|.||.|....+        ++.||||.+..+...   +.+                       ..-.
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~--------~~~VaiK~m~l~~Q~---~ke-----------------------Liln  319 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKIST--------KQEVAIKRMDLRKQP---KKE-----------------------LLLN  319 (550)
T ss_pred             hhcchhhhccccccceeeeeeccC--------CceEEEEEEEeccCC---chh-----------------------hhHH
Confidence            378889999999999999998666        899999998753211   111                       1123


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..|+.+++.+| .--+.|.. ...+.||||+. +|.+..-+....+++.++..+..+++.+|.+|| ..||||||||-
T Consensus       320 Ei~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~-ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH-~~gIiHrDIKS  397 (550)
T KOG0578|consen  320 EILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME-GGSLTDVVTKTRMTEGQIAAICREILQGLKFLH-ARGIIHRDIKS  397 (550)
T ss_pred             HHHHHHhccchHHHHHHHHhcccceeEEEEeecC-CCchhhhhhcccccHHHHHHHHHHHHHHHHHHH-hcceeeecccc
Confidence            4444544443331 11111222 44689999995 343222233456899999999999999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEccccccCC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      .|||+ .+|.++|+|||+|..+.
T Consensus       398 DnILL~~~g~vKltDFGFcaqi~  420 (550)
T KOG0578|consen  398 DNILLTMDGSVKLTDFGFCAQIS  420 (550)
T ss_pred             ceeEeccCCcEEEeeeeeeeccc
Confidence            99999 57899999999998764

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.58  E-value=1.5e-14  Score=134.97  Aligned_cols=146  Identities=15%  Similarity=0.125  Sum_probs=104.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|....+    +...+..||+|+++....                         .........
T Consensus         7 ~~~~~~~i~~g~~g~V~~~~~~~~----~~~~~~~v~~k~~~~~~~-------------------------~~~~~~~~~   57 (280)
T cd05043           7 RVTLSDLLQEGTFGRIFYGILIDE----KPGKEEEVFVKTVKDHAS-------------------------EIQVTLLLQ   57 (280)
T ss_pred             heEEeeeecccCCceEEEEEEecC----CCCceeEEEEEEccCCCC-------------------------HHHHHHHHH
Confidence            478899999999999999987431    011257899998764210                         001112346


Q ss_pred             HHHHHHHhhhCCCCccccccc-----cceEEEEcccCccccccccccc---------CCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL-----KSHVLLMTFIGEDGWPAAKLKD---------TPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~---------~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      |...|++|.+.++.  .++..     ...+++++|++ .|.....+..         ..++...+..++.+++.+|.+||
T Consensus        58 e~~~l~~l~h~ni~--~~~~~~~~~~~~~~~~~~~~~-~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH  134 (280)
T cd05043          58 ESCLLYGLSHQNIL--PILHVCIEDGEPPFVLYPYMN-WGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH  134 (280)
T ss_pred             HHHHHHhCCCCCCC--eEEEEEecCCCCCEEEEEcCC-CCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            78889988777642  22221     34579999996 3433322322         24777888999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|++|+||||.|||+. ++.++|+|||.|...
T Consensus       135 -~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~  167 (280)
T cd05043         135 -KRGVIHKDIAARNCVIDEELQVKITDNALSRDL  167 (280)
T ss_pred             -HCCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence             59999999999999994 589999999998643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.58  E-value=1.3e-14  Score=133.98  Aligned_cols=140  Identities=17%  Similarity=0.106  Sum_probs=101.6

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||.|++|.||.|.+..+        ++.||||++........                       .......+|...+.+
T Consensus         1 lg~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~~~-----------------------~~~~~~~~e~~~l~~   49 (262)
T cd05572           1 LGVGGFGRVELVKVKSK--------NRTFALKCVKKRHIVET-----------------------GQQEHIFSEKEILEE   49 (262)
T ss_pred             CCCCCceEEEEEEECCC--------CcEEEEEEEehhcchhh-----------------------hHHHHHHHHHHHHHh
Confidence            79999999999998666        89999999875321000                       011123467788888


Q ss_pred             hhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe
Q psy10135        123 MYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH  199 (351)
Q Consensus       123 L~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~  199 (351)
                      +.+.++. ....+. ....++||||+. +|.....+.. ..++...+..+..||+.+|.++| .+|++|+||+|.||++.
T Consensus        50 l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH-~~~~~h~dl~~~nilv~  127 (262)
T cd05572          50 CNHPFIVKLYRTFKDKKYIYMLMEYCL-GGELWTILRDRGLFDEYTARFYIACVVLAFEYLH-NRGIIYRDLKPENLLLD  127 (262)
T ss_pred             CCCCCEeeeeeeEEcCCccEEEEecCC-CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh-hCCcccCCCCHHHEEEc
Confidence            8766532 212211 234579999995 3444334433 35788888899999999999999 59999999999999994


Q ss_pred             -CCeEEEEEccccccCC
Q psy10135        200 -KATLFIIDVAQSVEHD  215 (351)
Q Consensus       200 -~g~l~IIDFG~Av~~~  215 (351)
                       ++.++|+|||.+....
T Consensus       128 ~~~~~~l~df~~~~~~~  144 (262)
T cd05572         128 SNGYVKLVDFGFAKKLK  144 (262)
T ss_pred             CCCCEEEeeCCcccccC
Confidence             6899999999987654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.58  E-value=6.6e-15  Score=136.46  Aligned_cols=145  Identities=16%  Similarity=0.147  Sum_probs=100.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|.....     .+.++.||||+++.......                      .  .....+|
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~-----~~~~~~~aiK~~~~~~~~~~----------------------~--~~~~~~E   51 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSE-----DGSFQKVAVKMLKADIFSSS----------------------D--IEEFLRE   51 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeecc-----CCCceEEEEEEeccccCChH----------------------H--HHHHHHH
Confidence            56788999999999999985321     12278999999875321100                      0  1113468


Q ss_pred             HHHHHHhhhCCCCccccccc----------cceEEEEcccCccccccccc-----cc--CCCCHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAAKL-----KD--TPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~~L-----~~--~~l~~~~~~~l~~qll~~L~~  179 (351)
                      +..|.++.+.++  .+.+..          .-.+++|+|.. .|.....+     ..  ..++...+..++.|++.+|.+
T Consensus        52 ~~~l~~l~h~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~  128 (273)
T cd05074          52 AACMKEFDHPNV--IKLIGVSLRSRAKGRLPIPMVILPFMK-HGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEY  128 (273)
T ss_pred             HHHHhcCCCCCc--ceEEEEEccCCCCCcccceEEEEecCC-CCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            888888876653  222221          11258889885 34322111     11  236777889999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      || ..|++|+||||.||++. ++.++|+|||.+...
T Consensus       129 lH-~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~  163 (273)
T cd05074         129 LS-SKNFIHRDLAARNCMLNENMTVCVADFGLSKKI  163 (273)
T ss_pred             HH-hCCEeecccchhhEEEcCCCCEEECcccccccc
Confidence            99 59999999999999995 678999999998754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0574|consensus

Probab=99.58  E-value=1.8e-16  Score=151.10  Aligned_cols=144  Identities=19%  Similarity=0.213  Sum_probs=111.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      ++.|.+.||+|+||.||+|.++++        |..+|||.....    .+.                   ..     ..+
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~Es--------G~v~AIK~VPV~----sDL-------------------QE-----IIK   77 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRES--------GHVLAIKKVPVD----TDL-------------------QE-----IIK   77 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhcc--------CcEEEEEecCcc----chH-------------------HH-----HHH
Confidence            467889999999999999999787        999999976531    111                   11     246


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccc--ccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWP--AAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~--~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+.+|++....-  |.+.|.    ....+||||||| .|..  ..+++..+|++.++..++...+.+|.+||. ..-|||
T Consensus        78 EISIMQQC~S~y--VVKYYGSYFK~sDLWIVMEYCG-AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~-~~KIHR  153 (502)
T KOG0574|consen   78 EISIMQQCKSKY--VVKYYGSYFKHSDLWIVMEYCG-AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD-LKKIHR  153 (502)
T ss_pred             HHHHHHHcCCch--hhhhhhhhccCCceEeehhhcC-CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH-HHHHHh
Confidence            888888776542  223332    245689999998 5543  345667789999999999999999999994 788999


Q ss_pred             CCCCCceEE-eCCeEEEEEccccccCCCCCh
Q psy10135        190 DLSEYNMLV-HKATLFIIDVAQSVEHDHPHA  219 (351)
Q Consensus       190 DLkp~NILi-~~g~l~IIDFG~Av~~~~p~a  219 (351)
                      |||..|||+ .+|..+|.|||.|..+...+|
T Consensus       154 DIKAGNILLNT~G~AKLADFGVAGQLTDTMA  184 (502)
T KOG0574|consen  154 DIKAGNILLNTDGIAKLADFGVAGQLTDTMA  184 (502)
T ss_pred             hcccccEEEcccchhhhhhccccchhhhhHH
Confidence            999999999 579999999999987755443

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.58  E-value=9.6e-15  Score=134.65  Aligned_cols=145  Identities=16%  Similarity=0.170  Sum_probs=103.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.|.+.||.|++|.||+|.+...        +..+++|+.+......            +         .......+..|
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~--------~~~~~~~~~~~~~~~~------------~---------~~~~~~~~~~e   52 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKA--------VAEERLKVLKEIPVGE------------L---------NPNETVQANQE   52 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCC--------CCcceEEEeccccccc------------c---------CcchHHHHHHH
Confidence            78889999999999999988544        6678888877532100            0         00011223456


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      ...+.++.+.++.  +++.    ....++||||+. ++.....+.     ...++..++..++.|++.++.+|| ..|++
T Consensus        53 ~~~l~~l~h~~i~--~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~  128 (260)
T cd08222          53 AQLLSKLDHPAIV--KFHASFLERDAFCIITEYCE-GRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH-QRRIL  128 (260)
T ss_pred             HHHHHhCCCCcHH--HHHHHHhcCCceEEEEEeCC-CCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH-HcCcc
Confidence            7777777665532  2222    245689999995 333222221     235788888999999999999999 59999


Q ss_pred             ccCCCCCceEEeCCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVHKATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~~g~l~IIDFG~Av~~  214 (351)
                      |+||+|.||++.++.++|+|||.+...
T Consensus       129 h~~l~~~nili~~~~~~l~d~g~~~~~  155 (260)
T cd08222         129 HRDLKAKNIFLKNNLLKIGDFGVSRLL  155 (260)
T ss_pred             ccCCChhheEeecCCEeecccCceeec
Confidence            999999999998889999999988543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.58  E-value=1.4e-14  Score=137.48  Aligned_cols=138  Identities=15%  Similarity=0.129  Sum_probs=101.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||.|++|.||+|....+        |..||||.+.....                          ....+...|+..+
T Consensus        26 ~~lg~g~~g~v~~~~~~~~--------~~~v~iK~~~~~~~--------------------------~~~~~~~~e~~~l   71 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSS--------GKLVAVKKMDLRKQ--------------------------QRRELLFNEVVIM   71 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCC--------CeEEEEEEecccch--------------------------hHHHHHHHHHHHH
Confidence            6799999999999988666        89999998643110                          0122345678888


Q ss_pred             HHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        121 TRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      .++.+.++ .....+. ....++||||++ ++.....+....++...+..++.|++.++.+|| ..|++|+||+|.||++
T Consensus        72 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~givH~dl~p~Nilv  149 (292)
T cd06657          72 RDYQHENVVEMYNSYLVGDELWVVMEFLE-GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLH-AQGVIHRDIKSDSILL  149 (292)
T ss_pred             HhcCCcchhheeeEEEeCCEEEEEEecCC-CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEE
Confidence            88876553 2222222 245689999995 333322333446788888999999999999999 5899999999999999


Q ss_pred             e-CCeEEEEEccccccC
Q psy10135        199 H-KATLFIIDVAQSVEH  214 (351)
Q Consensus       199 ~-~g~l~IIDFG~Av~~  214 (351)
                      . ++.++|+|||.+...
T Consensus       150 ~~~~~~~l~dfg~~~~~  166 (292)
T cd06657         150 THDGRVKLSDFGFCAQV  166 (292)
T ss_pred             CCCCCEEEcccccceec
Confidence            5 678999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.58  E-value=1.3e-14  Score=132.23  Aligned_cols=139  Identities=17%  Similarity=0.170  Sum_probs=100.2

Q ss_pred             eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHH
Q psy10135         43 ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR  122 (351)
Q Consensus        43 Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~r  122 (351)
                      ||+|++|.||+|....+        ++.+|+|+++.......                       ........|+..+++
T Consensus         1 lg~G~~~~v~~~~~~~~--------~~~~~~k~~~~~~~~~~-----------------------~~~~~~~~e~~~l~~   49 (250)
T cd05123           1 LGKGSFGKVLLVRKKDT--------GKLYAMKVLKKKKIIKR-----------------------KEVEHTLTERNILSR   49 (250)
T ss_pred             CCCCCceEEEEEEECCC--------CcEEEEEEeehhhhcch-----------------------HHHHHHHHHHHHHHH
Confidence            69999999999998555        89999999876321000                       011123457777888


Q ss_pred             hhhCCCC-ccccccc-cceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe
Q psy10135        123 MYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH  199 (351)
Q Consensus       123 L~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~  199 (351)
                      +.+.++. +...+.. ...++||||++ ++.....+... .++...+..+..|++.++.+|| .+|++|+||+|.||++.
T Consensus        50 l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh-~~~~~H~~l~p~ni~~~  127 (250)
T cd05123          50 INHPFIVKLHYAFQTEEKLYLVLEYAP-GGELFSHLSKEGRFSEERARFYAAEIVLALEYLH-SLGIIYRDLKPENILLD  127 (250)
T ss_pred             cCCCcHHHHHHHeecCCeeEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCcceEEEc
Confidence            7766532 1111112 34589999995 34443334332 5788888999999999999999 59999999999999995


Q ss_pred             -CCeEEEEEccccccC
Q psy10135        200 -KATLFIIDVAQSVEH  214 (351)
Q Consensus       200 -~g~l~IIDFG~Av~~  214 (351)
                       ++.++|+|||.+...
T Consensus       128 ~~~~~~l~d~~~~~~~  143 (250)
T cd05123         128 ADGHIKLTDFGLAKEL  143 (250)
T ss_pred             CCCcEEEeecCcceec
Confidence             578999999998654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0197|consensus

Probab=99.58  E-value=3.1e-15  Score=150.67  Aligned_cols=139  Identities=15%  Similarity=0.126  Sum_probs=107.7

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.+.||+|-||.||.|.. ..        ...||+|.++.....                           .....+|+
T Consensus       209 ~l~~~LG~G~FG~V~~g~~-~~--------~~~vavk~ik~~~m~---------------------------~~~f~~Ea  252 (468)
T KOG0197|consen  209 KLIRELGSGQFGEVWLGKW-NG--------STKVAVKTIKEGSMS---------------------------PEAFLREA  252 (468)
T ss_pred             HHHHHhcCCccceEEEEEE-cC--------CCcccceEEeccccC---------------------------hhHHHHHH
Confidence            4568899999999999998 32        458999999874211                           11223699


Q ss_pred             HHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        118 RNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       118 ~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      .+|++|++..| ..-.+... ...+|||||+. .|.++..|+.   ..+...+...+..||+++|.+|. +.++|||||-
T Consensus       253 ~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~-~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe-s~~~IHRDLA  330 (468)
T KOG0197|consen  253 QIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP-KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE-SKNYIHRDLA  330 (468)
T ss_pred             HHHHhCcccCeEEEEEEEecCCceEEEEEecc-cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH-hCCccchhhh
Confidence            99999987653 11111111 23589999998 8888777775   34788899999999999999998 6999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..|||+. +..+||.|||+|+..
T Consensus       331 ARNiLV~~~~~vKIsDFGLAr~~  353 (468)
T KOG0197|consen  331 ARNILVDEDLVVKISDFGLARLI  353 (468)
T ss_pred             hhheeeccCceEEEccccccccc
Confidence            9999995 578999999999854

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.57  E-value=8.9e-15  Score=139.59  Aligned_cols=145  Identities=19%  Similarity=0.116  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+.+.||.|++|.||+|.+..+        +..+|||.+........                      ... .....
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~--------~~~~~ik~~~~~~~~~~----------------------~~~-~~~~~   64 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRN--------SEVVAIKKMSYSGKQSN----------------------EKW-QDIIK   64 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCC--------CcEEEEEEEecccccCh----------------------HHH-HHHHH
Confidence            477788999999999999998555        88999998864211000                      011 12345


Q ss_pred             HHHHHHHhhhCCC-Cccccc-cccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|+.+.+.++ +....+ .....++||||++  |.....+.  ...++..++..++.+++.++.+|| .+|++|+||
T Consensus        65 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH-~~~i~H~dl  141 (308)
T cd06634          65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL--GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDV  141 (308)
T ss_pred             HHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC--CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCC
Confidence            8888888876653 222111 2245689999994  54333222  235778888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.|||+. ++.++|+|||.+...
T Consensus       142 ~p~nil~~~~~~~kl~dfg~~~~~  165 (308)
T cd06634         142 KAGNILLSEPGLVKLGDFGSASIM  165 (308)
T ss_pred             CHHhEEECCCCcEEECCcccceee
Confidence            99999995 588999999988643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.57  E-value=1.9e-14  Score=144.12  Aligned_cols=53  Identities=21%  Similarity=0.122  Sum_probs=46.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        161 LTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       161 l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ++..++..++.||+.+|.+|| ..|++|+||||.|||+. ++.++|+|||.+...
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH-~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~  289 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLA-SKNCVHRDLAARNVLICEGKLVKICDFGLARDI  289 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh-cCCcCcccCCcceEEEeCCCEEEEEecCcceec
Confidence            445567788999999999999 59999999999999995 578999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.57  E-value=1.4e-14  Score=136.02  Aligned_cols=148  Identities=20%  Similarity=0.157  Sum_probs=101.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|......   +...+..||||+++.....                         ........|
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~~~aiK~~~~~~~~-------------------------~~~~~~~~e   58 (288)
T cd05050           7 IEYVRDIGQGAFGRVFQARAPGLL---PYEPFTMVAVKMLKEEASA-------------------------DMQADFQRE   58 (288)
T ss_pred             ceecccccccccccEEEEEEcccC---CCCcceeEEEEecCCCcCH-------------------------HHHHHHHHH
Confidence            788899999999999999862100   0011678999988642110                         011123457


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-----------------------CCCCHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----------------------TPLTESGACKLYR  171 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----------------------~~l~~~~~~~l~~  171 (351)
                      +..+.++.+.++. +...+. ....++||||++ .|.....+..                       ..++..++..++.
T Consensus        59 i~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  137 (288)
T cd05050          59 AALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMA-YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAK  137 (288)
T ss_pred             HHHHHhcCCCchheEEEEEcCCCccEEEEecCC-CCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHH
Confidence            8888888766532 111111 134689999996 3332222211                       1356677789999


Q ss_pred             HHHHHHHHHHhhCCccccCCCCCceEE-eCCeEEEEEccccccC
Q psy10135        172 ECVVMMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       172 qll~~L~~LH~~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      +++.+|.+|| ..|++|+||||.|||+ .++.++|+|||.+...
T Consensus       138 ~i~~aL~~lH-~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  180 (288)
T cd05050         138 QVAAGMAYLS-ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI  180 (288)
T ss_pred             HHHHHHHHHH-hCCeecccccHhheEecCCCceEECccccceec
Confidence            9999999999 5899999999999999 4688999999988643

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.57  E-value=2.1e-14  Score=133.73  Aligned_cols=137  Identities=19%  Similarity=0.124  Sum_probs=94.7

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCc--EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEK--EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~--~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.||.|++|.||+|....+        |.  .+|+|.++.....                         ........|+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~--------~~~~~~~~k~~~~~~~~-------------------------~~~~~~~~E~~   47 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKD--------GLRMDAAIKRMKEYASK-------------------------DDHRDFAGELE   47 (270)
T ss_pred             CcCCCCCCceEEEEEEcCC--------CCeeEEEEEEccccCCH-------------------------HHHHHHHHHHH
Confidence            3689999999999988444        54  5688877642100                         00011245788


Q ss_pred             HHHHh-hhCCC-Ccccccc-ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHHHHHH
Q psy10135        119 NLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       119 nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll~~L~  178 (351)
                      .+.++ .+.+| ++...+. ....++||||+. .|.....+..                 ..++..++..++.+++.+|.
T Consensus        48 ~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~  126 (270)
T cd05047          48 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAP-HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD  126 (270)
T ss_pred             HHHhhccCCCeeeEEEEEecCCCceEEEEeCC-CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHH
Confidence            88888 44442 1111111 244689999995 3433222221                 13677788999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEe-CCeEEEEEccccc
Q psy10135        179 RLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av  212 (351)
                      +|| .+|++|+||||.|||+. ++.++|+|||.+.
T Consensus       127 ~lH-~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         127 YLS-QKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             HHH-HCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            999 59999999999999995 6899999999884

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.57  E-value=1.9e-14  Score=134.67  Aligned_cols=137  Identities=26%  Similarity=0.301  Sum_probs=94.9

Q ss_pred             eeecce--eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGC--ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~--Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |.+.+.  ||.|+||.||++....+        |..+|+|+++....  ..                      .     +
T Consensus        16 ~~~~~~~~lg~g~~g~v~~~~~~~~--------~~~~~~k~~~~~~~--~~----------------------~-----e   58 (267)
T PHA03390         16 CEIVKKLKLIDGKFGKVSVLKHKPT--------QKLFVQKIIKAKNF--NA----------------------I-----E   58 (267)
T ss_pred             hccccceeecCCCceEEEEEEEcCC--------CcEEEEEEEehhhc--ch----------------------h-----h
Confidence            444444  59999999999998666        89999999875311  00                      0     0


Q ss_pred             HHHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        115 KEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      .+...+.+ .+.+  +++.+.    ....++||||+. +|.....+.. ..++..++..++.|++.+|.+|| ..|++|+
T Consensus        59 ~~~~~~~~-~h~~--iv~~~~~~~~~~~~~iv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH-~~~i~H~  133 (267)
T PHA03390         59 PMVHQLMK-DNPN--FIKLYYSVTTLKGHVLIMDYIK-DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLH-KHNIIHN  133 (267)
T ss_pred             HHHHHHhh-cCCC--EEEEEEEEecCCeeEEEEEcCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeC
Confidence            01111111 1222  222221    245689999995 3444444443 36888999999999999999999 5999999


Q ss_pred             CCCCCceEEe-CC-eEEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KA-TLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g-~l~IIDFG~Av~~~  215 (351)
                      ||+|.||++. ++ .++|+|||.+....
T Consensus       134 dl~p~nil~~~~~~~~~l~dfg~~~~~~  161 (267)
T PHA03390        134 DIKLENVLYDRAKDRIYLCDYGLCKIIG  161 (267)
T ss_pred             CCCHHHEEEeCCCCeEEEecCccceecC
Confidence            9999999995 45 89999999886554

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.56  E-value=3.9e-14  Score=131.40  Aligned_cols=138  Identities=19%  Similarity=0.126  Sum_probs=98.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||+|++|.||+|.+..+        +..||+|.+.....                        ..  ......|+..+
T Consensus        14 ~~lg~g~~g~v~~~~~~~~--------~~~v~~k~~~~~~~------------------------~~--~~~~~~e~~~l   59 (268)
T cd06624          14 VVLGKGTYGIVYAARDLST--------QVRIAIKEIPERDS------------------------RY--VQPLHEEIALH   59 (268)
T ss_pred             EEEecCCceEEEEeEecCC--------CcEEEEEEecCCCH------------------------HH--HHHHHHHHHHH
Confidence            4799999999999998556        88999998765311                        00  01234678888


Q ss_pred             HHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc--CCC--CHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        121 TRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPL--TESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l--~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      .++.+.+|. +..... ....++||||+. .|.....+..  ..+  +...+..++.||+.+|.+|| ..||+|+||||.
T Consensus        60 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~h~dl~p~  137 (268)
T cd06624          60 SYLKHRNIVQYLGSDSENGFFKIFMEQVP-GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH-DNQIVHRDIKGD  137 (268)
T ss_pred             HhcCCCCeeeeeeeeccCCEEEEEEecCC-CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH-HCCEeecCCCHH
Confidence            888766532 111111 134579999995 3333333332  234  66677888999999999999 599999999999


Q ss_pred             ceEEe--CCeEEEEEccccccC
Q psy10135        195 NMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~--~g~l~IIDFG~Av~~  214 (351)
                      |||++  ++.++|+|||.+...
T Consensus       138 nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624         138 NVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             HEEEcCCCCeEEEecchhheec
Confidence            99995  578999999988543

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.56  E-value=1.5e-14  Score=135.72  Aligned_cols=142  Identities=13%  Similarity=0.113  Sum_probs=93.5

Q ss_pred             eeeecCceEEEEEEeCCC----------------cccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCCh
Q psy10135         42 CISTGKEANVYHASPGAN----------------YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNP  105 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~----------------~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~  105 (351)
                      .||+|+||.||+|....+                ...........||+|++......                       
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-----------------------   58 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRD-----------------------   58 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHH-----------------------
Confidence            589999999999974211                00001122345888887642110                       


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHH
Q psy10135        106 RKMVRTWAEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       106 r~~vk~~aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~  179 (351)
                        . ......|...+.++.+.+|  +..+.    ....+|||||++ .|.....+.  ...++...+..++.||+.+|.+
T Consensus        59 --~-~~~~~~~~~~~~~l~h~ni--v~~~~~~~~~~~~~lv~ey~~-~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~  132 (274)
T cd05076          59 --I-ALAFFETASLMSQVSHIHL--AFVHGVCVRGSENIMVEEFVE-HGPLDVCLRKEKGRVPVAWKITVAQQLASALSY  132 (274)
T ss_pred             --H-HHHHHHHHHHHhcCCCCCe--eeEEEEEEeCCceEEEEecCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence              0 1112345667777776653  22222    245689999996 343333332  2357788888999999999999


Q ss_pred             HHhhCCccccCCCCCceEEeC--------CeEEEEEcccccc
Q psy10135        180 LYNKCHLVHADLSEYNMLVHK--------ATLFIIDVAQSVE  213 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~~--------g~l~IIDFG~Av~  213 (351)
                      || ..|||||||||.|||+..        ..+++.|||.+..
T Consensus       133 lH-~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~  173 (274)
T cd05076         133 LE-DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFT  173 (274)
T ss_pred             HH-cCCccCCCCCcccEEEeccCcccCccceeeecCCccccc
Confidence            99 589999999999999953        2489999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.56  E-value=2.2e-14  Score=134.55  Aligned_cols=145  Identities=19%  Similarity=0.102  Sum_probs=100.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+.+.||+|+||.||+|.....   ...+.+..+|+|.++....                        . . ......|
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~~~~~~k~~~~~~~------------------------~-~-~~~~~~e   57 (280)
T cd05092           7 IVLKWELGEGAFGKVFLAECHNL---LPEQDKMLVAVKALKEASE------------------------S-A-RQDFQRE   57 (280)
T ss_pred             ceeccccCCccCCeEEEeEEecC---CCCCCceEEEEEecCcCCH------------------------H-H-HHHHHHH
Confidence            56789999999999999964110   0111266899998764211                        0 0 1123568


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc----------------CCCCHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD----------------TPLTESGACKLYRECVVM  176 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~----------------~~l~~~~~~~l~~qll~~  176 (351)
                      +..|.++.+.+|  .+.+.    ....++||||+. +|.....+..                ..++...+..+..||+.+
T Consensus        58 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  134 (280)
T cd05092          58 AELLTVLQHQHI--VRFYGVCTEGRPLLMVFEYMR-HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASG  134 (280)
T ss_pred             HHHHhcCCCCCC--ceEEEEEecCCceEEEEecCC-CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHH
Confidence            888888876653  22222    144689999995 3332222211                236777888999999999


Q ss_pred             HHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        177 MWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       177 L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|| .+|++|+||||.|||+. ++.++|+|||.+...
T Consensus       135 l~~LH-~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~  172 (280)
T cd05092         135 MVYLA-SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI  172 (280)
T ss_pred             HHHHH-HCCeecccccHhhEEEcCCCCEEECCCCceeEc
Confidence            99999 59999999999999995 578999999998643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.56  E-value=2e-14  Score=131.60  Aligned_cols=144  Identities=14%  Similarity=0.196  Sum_probs=102.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|++|.||+|....+        |..+|+|.+.......+.                        ......|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~--------~~~~~ik~~~~~~~~~~~------------------------~~~~~~E   49 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSD--------SEHCVIKEIDLTKMPVKE------------------------KEASKKE   49 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCC--------CceEEEEEeeHhhccchh------------------------hHHHHHH
Confidence            77889999999999999998666        899999988652111000                        1123467


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..++++.+.++ ++...+. ....++||||+. .+.....+..   ..++...+..++.+++.+|.+|| .+|++|+||
T Consensus        50 ~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~H~dl  127 (257)
T cd08225          50 VILLAKMKHPNIVTFFASFQENGRLFIVMEYCD-GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH-DRKILHRDI  127 (257)
T ss_pred             HHHHHhCCCCChhhhhheeccCCeEEEEEecCC-CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccC
Confidence            888888866553 2221111 134579999995 3333333322   24677888999999999999999 599999999


Q ss_pred             CCCceEEeC-C-eEEEEEccccccC
Q psy10135        192 SEYNMLVHK-A-TLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~~-g-~l~IIDFG~Av~~  214 (351)
                      +|.||++.+ + .++|+|||.+...
T Consensus       128 ~~~nil~~~~~~~~~l~d~~~~~~~  152 (257)
T cd08225         128 KSQNIFLSKNGMVAKLGDFGIARQL  152 (257)
T ss_pred             CHHHEEEcCCCCeEEecccccchhc
Confidence            999999954 3 4799999988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0690|consensus

Probab=99.56  E-value=2.2e-15  Score=145.05  Aligned_cols=144  Identities=21%  Similarity=0.172  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +..+++||.|.||.|-+++...+        |+.|||||++......++.-.                       ...-|
T Consensus       170 FdfLKvLGkGTFGKVIL~rEKat--------~k~YAiKIlkKeviiakdEVA-----------------------HTlTE  218 (516)
T KOG0690|consen  170 FDFLKVLGKGTFGKVILCREKAT--------GKLYAIKILKKEVIIAKDEVA-----------------------HTLTE  218 (516)
T ss_pred             hhHHHHhcCCccceEEEEeeccc--------CceeehhhhhhhheeehHHhh-----------------------hhhhH
Confidence            56789999999999999998777        999999999875332222110                       11234


Q ss_pred             HHHHHHhhhCCCCcc-cccc-ccceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVP-KPIL-LKSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~-~~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      -+.|+...++-+..- ..+. ..+.|+||||.. +|.+...|... .+++..++-+..+|+.+|.+||+ .+||.||||.
T Consensus       219 ~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyan-GGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs-~~ivYRDlKL  296 (516)
T KOG0690|consen  219 NRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYAN-GGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHS-RNIVYRDLKL  296 (516)
T ss_pred             HHHHHhccCcHHHHhhhhhccCceEEEEEEEcc-CceEeeehhhhhcccchhhhhhhHHHHHHhhhhhh-CCeeeeechh
Confidence            555554443311100 0111 256799999996 56666666543 48888888899999999999995 8999999999


Q ss_pred             CceEE-eCCeEEEEEcccccc
Q psy10135        194 YNMLV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~  213 (351)
                      +|+|+ .+|+++|.|||+|.+
T Consensus       297 ENLlLDkDGHIKitDFGLCKE  317 (516)
T KOG0690|consen  297 ENLLLDKDGHIKITDFGLCKE  317 (516)
T ss_pred             hhheeccCCceEeeecccchh
Confidence            99999 589999999999975

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.56  E-value=2.4e-14  Score=134.23  Aligned_cols=143  Identities=16%  Similarity=0.202  Sum_probs=107.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++...||+|++|.||.|.+..+        +..+|+|+++....                           .......
T Consensus        20 ~~~~~~~l~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~---------------------------~~~~~~~   64 (286)
T cd06614          20 LYKNLEKIGEGASGEVYKATDRAT--------GKEVAIKKMRLRKQ---------------------------NKELIIN   64 (286)
T ss_pred             cchHhHhccCCCCeEEEEEEEccC--------CcEEEEEEEecCch---------------------------hHHHHHH
Confidence            488999999999999999998556        88999999875321                           0112346


Q ss_pred             HHHHHHHhhhCCC-Cccccc-cccceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.++.+.++ .+...+ .....++||||++ ++.....+...  .++...+..++.+++.+|.+|| ..|++|+||
T Consensus        65 e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH-~~gi~H~dl  142 (286)
T cd06614          65 EILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMD-GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH-SQNVIHRDI  142 (286)
T ss_pred             HHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccC-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCC
Confidence            7888888876653 222221 1245689999995 34333333333  5788888999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|.||+++ ++.++|+|||.+....
T Consensus       143 ~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614         143 KSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             ChhhEEEcCCCCEEECccchhhhhc
Confidence            99999996 6789999999876443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0604|consensus

Probab=99.56  E-value=1.7e-15  Score=144.29  Aligned_cols=144  Identities=17%  Similarity=0.234  Sum_probs=108.1

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |.|. .+||-|--|.|-.+..+.+        |+.+|+|+++-+..   .                          .-+-
T Consensus        63 Y~is~qvLG~GinGkV~~C~~k~T--------~ekfALKvL~Ds~K---A--------------------------RrEV  105 (400)
T KOG0604|consen   63 YSISWQVLGAGINGKVVQCVHKRT--------QEKFALKVLLDSPK---A--------------------------RREV  105 (400)
T ss_pred             heehhhhhccccCCceEEEEeccc--------hhhhHHHHHhcCHH---H--------------------------HhHh
Confidence            6665 8899999999999999777        99999999875421   1                          1122


Q ss_pred             HHHHHHHhhhCCCCccccccc---cc--eEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL---KS--HVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~---~~--~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+.++..-+...|.+-.+|..   +.  ..+|||++. +|.++.++.+   ..+++.++.++..||..|+++|| ..+|.
T Consensus       106 eLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me-GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH-~~nIA  183 (400)
T KOG0604|consen  106 ELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME-GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH-SMNIA  183 (400)
T ss_pred             hhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc-chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH-hcchh
Confidence            444554434333444444432   22  347999996 6777777754   34899999999999999999999 59999


Q ss_pred             ccCCCCCceEEe----CCeEEEEEccccccCCCCCh
Q psy10135        188 HADLSEYNMLVH----KATLFIIDVAQSVEHDHPHA  219 (351)
Q Consensus       188 H~DLkp~NILi~----~g~l~IIDFG~Av~~~~p~a  219 (351)
                      ||||||+|+|+.    +.-++|.|||+|.+...|..
T Consensus       184 HRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~  219 (400)
T KOG0604|consen  184 HRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGD  219 (400)
T ss_pred             hccCChhheeeecCCCCcceEecccccccccCCCcc
Confidence            999999999994    34799999999988765443

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.56  E-value=4.1e-14  Score=133.41  Aligned_cols=141  Identities=13%  Similarity=0.117  Sum_probs=102.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.-...||.|++|.||+|.+..+        ++.+|||.++....  .                        ......+|
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~--------~~~~~iK~~~~~~~--~------------------------~~~~~~~e   66 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKST--------GRQVAVKKMDLRKQ--Q------------------------RRELLFNE   66 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCC--------CCEEEEEEEeccch--h------------------------HHHHHHHH
Confidence            33457999999999999998556        88999998753210  0                        01123457


Q ss_pred             HHHHHHhhhCCCC-ccccc-cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      ...+.++.+.++. +...+ .....++||||+. ++.....+....++..++..++.|++.+|.+|| .+|++||||+|.
T Consensus        67 ~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~i~H~dl~p~  144 (285)
T cd06648          67 VVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE-GGALTDIVTHTRMNEEQIATVCLAVLKALSFLH-AQGVIHRDIKSD  144 (285)
T ss_pred             HHHHHHcCCCChheEEEEEEcCCeEEEEEeccC-CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCChh
Confidence            7778887665532 11111 1245689999995 333333344456788888999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEcccccc
Q psy10135        195 NMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||++. ++.++|+|||.+..
T Consensus       145 Nil~~~~~~~~l~d~g~~~~  164 (285)
T cd06648         145 SILLTSDGRVKLSDFGFCAQ  164 (285)
T ss_pred             hEEEcCCCcEEEcccccchh
Confidence            99995 68999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0599|consensus

Probab=99.55  E-value=4.6e-15  Score=140.06  Aligned_cols=150  Identities=18%  Similarity=0.200  Sum_probs=113.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.-.+.||.|.-+.|-++...++        |..+|+|++-.....       .          ...+ .+.+.-...+|
T Consensus        19 y~pkeilgrgvss~vrRci~k~t--------~~e~a~kii~~~at~-------~----------~~e~-~~~~~EaT~~E   72 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHKET--------GKEFAVKIIDVTATT-------E----------SGET-PYEMREATRQE   72 (411)
T ss_pred             cChHHHhcccchhhhhhhhhccc--------ccceeEEEEEecccc-------c----------CCcc-HHHHHHHHHHH
Confidence            55668899999999999988777        999999998642110       0          0122 34455567789


Q ss_pred             HHHHHHhhhC--CCCccccccccc-eEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSE--GLNVPKPILLKS-HVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~--gi~vP~pi~~~~-~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ..+|+++...  .|.....|.... .++|+|.+. .|.+...|.. +.+++.+++.++.|+++++.+||. .+|||||||
T Consensus        73 v~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~p-rGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa-~~IVHRDLK  150 (411)
T KOG0599|consen   73 ISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMP-RGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHA-RNIVHRDLK  150 (411)
T ss_pred             HHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcc-cchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHH-hhhhhcccC
Confidence            9999998532  122223333332 358999998 7777766654 468999999999999999999994 899999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|||++ +.+++|.|||.|..+
T Consensus       151 pENILlddn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen  151 PENILLDDNMNIKISDFGFACQL  173 (411)
T ss_pred             hhheeeccccceEEeccceeecc
Confidence            9999995 568999999999865

>KOG4717|consensus

Probab=99.55  E-value=8.9e-15  Score=147.36  Aligned_cols=145  Identities=17%  Similarity=0.141  Sum_probs=112.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +|.+.+.||+|.||.|-+|++.-+        |..|||||+....+.-                        ......-+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFT--------GekVAVKviDKTKlD~------------------------~st~hlfq   66 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFT--------GEKVAVKVIDKTKLDT------------------------LSTGHLFQ   66 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcc--------cceeEEEEecccccch------------------------hhhhHHHH
Confidence            489999999999999999998777        9999999997533210                        11222346


Q ss_pred             HHHHHHHhhhCC-CCccccccc-cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |++.|+-+.+++ |..-++|+. ...|||+|+=. .|.....+.  +.++.++-++++|.||+.++.++|+ ..+|||||
T Consensus        67 EVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD-~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHq-LHVVHRDL  144 (864)
T KOG4717|consen   67 EVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGD-GGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQ-LHVVHRDL  144 (864)
T ss_pred             HHHHHHHhcCcCeeeeeehhcccceEEEEEEecC-CchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhh-hhhhcccC
Confidence            888888887766 455555554 55689999752 455544432  3468888899999999999999995 99999999


Q ss_pred             CCCceEEe--CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      ||+|+.+-  -|-++|.|||++-..
T Consensus       145 KPENVVFFEKlGlVKLTDFGFSNkf  169 (864)
T KOG4717|consen  145 KPENVVFFEKLGLVKLTDFGFSNKF  169 (864)
T ss_pred             CcceeEEeeecCceEeeeccccccC
Confidence            99999993  589999999998643

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.55  E-value=3.9e-14  Score=131.91  Aligned_cols=144  Identities=20%  Similarity=0.192  Sum_probs=101.9

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.+.||.|.||.||+|.....    ....+..|+||+++.... .                        .......+|+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~----~~~~~~~V~vk~~~~~~~-~------------------------~~~~~~~~e~   52 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQK----DNDKNQPVAVKILKPSSS-E------------------------EEEEEFLNEI   52 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEEST----TTSSEEEEEEEEESTTSS-H------------------------HHHHHHHHHH
T ss_pred             EEeeEEccCCCcEEEEEEEEcc----cCCCCEEEEEEEeccccc-c------------------------ccceeeeecc
Confidence            4678999999999999988411    112267899999965210 0                        0011234588


Q ss_pred             HHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        118 RNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ..|.++.+.+|  .+.+.    ....++||||+. .|.....|..   ..++......++.||+.+|.+|| ..++||++
T Consensus        53 ~~l~~l~h~ni--~~~~g~~~~~~~~~lv~e~~~-~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh-~~~iiH~~  128 (259)
T PF07714_consen   53 QILRKLRHPNI--VKLYGFCIENEPLFLVMEYCP-GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH-SNNIIHGN  128 (259)
T ss_dssp             HHHHTHSBTTB--E-EEEEEESSSSEEEEEE--T-TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH-HTTEEEST
T ss_pred             ccccccccccc--ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc-cccccccc
Confidence            88888876653  22222    234689999995 4544444443   36888889999999999999999 58999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |++.||+++ ++.++|.|||.+...
T Consensus       129 l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  129 LSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             -SGGGEEEETTTEEEEESTTTGEET
T ss_pred             ccccccccccccccccccccccccc
Confidence            999999996 689999999998765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.55  E-value=2.9e-14  Score=132.90  Aligned_cols=139  Identities=12%  Similarity=0.014  Sum_probs=89.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|.....      .....+++|.++.... ..                        ......+|...+
T Consensus         1 ~~lg~G~~g~v~~~~~~~~------~~~~~~~~k~~~~~~~-~~------------------------~~~~~~~e~~~~   49 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTD------TGVARVVVKELKANAS-SK------------------------EQNEFLQQGDPY   49 (268)
T ss_pred             CcCCCCcCceEEEEEEEcC------CCcceEEEEEecCCCC-hH------------------------HHHHHHHHHHHH
Confidence            3699999999999975221      0023456666554210 00                        011223456666


Q ss_pred             HHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        121 TRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      .++.+.++ ++...+. ....++||||+. .|.....+..     ..++...+..+..||+.+|.+|| ..|+||+||||
T Consensus        50 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH-~~~i~H~dikp  127 (268)
T cd05086          50 RILQHPNILQCLGQCVEAIPYLLVFEYCE-LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH-KHNFLHSDLAL  127 (268)
T ss_pred             hccCCcchhheEEEecCCCccEEEEecCC-CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH-HCCeeccCCcc
Confidence            66665543 2211111 134589999995 3443333322     12444566788999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av  212 (351)
                      .|||+. ++.++|+|||.+.
T Consensus       128 ~nil~~~~~~~~l~Dfg~~~  147 (268)
T cd05086         128 RNCFLTSDLTVKVGDYGIGP  147 (268)
T ss_pred             ceEEEcCCccEEeccccccc
Confidence            999995 6889999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0201|consensus

Probab=99.54  E-value=3.4e-15  Score=147.87  Aligned_cols=146  Identities=19%  Similarity=0.184  Sum_probs=106.4

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      ....|....+||.|+||.||+|.+..+        ++.||||++....  +++.                       -..
T Consensus        11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~t--------~k~vAiKii~Le~--~~de-----------------------Ied   57 (467)
T KOG0201|consen   11 PELLYTKLELIGRGSFGEVYKAIDNKT--------KKVVAIKIIDLEE--AEDE-----------------------IED   57 (467)
T ss_pred             cccccccchhccccccceeeeeeeccc--------cceEEEEEechhh--cchh-----------------------hHH
Confidence            345688889999999999999999777        9999999997521  1111                       011


Q ss_pred             HHHHHHHHHHhhhCCCCccccc----cccceEEEEcccCcccccccccccCCC-CHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        113 AEKEMRNLTRMYSEGLNVPKPI----LLKSHVLLMTFIGEDGWPAAKLKDTPL-TESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~vP~pi----~~~~~vLVMEfig~~G~~~~~L~~~~l-~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      .++|+..|..+....|  -+.|    .-...+++|||++ .|..+..|+...+ .+.++.-+..+++.++.++| ..+.+
T Consensus        58 iqqei~~Ls~~~~~~i--t~yygsyl~g~~LwiiMey~~-gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH-~~~ki  133 (467)
T KOG0201|consen   58 IQQEISVLSQCDSPNI--TEYYGSYLKGTKLWIIMEYCG-GGSVLDLLKSGNILDEFEIAVILREVLKGLDYLH-SEKKI  133 (467)
T ss_pred             HHHHHHHHHhcCcchH--HhhhhheeecccHHHHHHHhc-CcchhhhhccCCCCccceeeeehHHHHHHhhhhh-hccee
Confidence            2345555555543221  1111    1133468999997 6666666665544 66777788999999999999 48999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||+.|||+. +|.++|.|||.|+.+.
T Consensus       134 HrDIKaanil~s~~g~vkl~DfgVa~ql~  162 (467)
T KOG0201|consen  134 HRDIKAANILLSESGDVKLADFGVAGQLT  162 (467)
T ss_pred             cccccccceeEeccCcEEEEecceeeeee
Confidence            999999999994 5899999999998664

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.54  E-value=4.7e-14  Score=145.43  Aligned_cols=165  Identities=13%  Similarity=0.119  Sum_probs=97.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCc--------ccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANY--------KIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRK  107 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~--------~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~  107 (351)
                      -|.+.++||+|+||.||+|......        +......++.||||.++......  ...++. +.....         
T Consensus       146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~--~~~fl~-e~~~~~---------  213 (507)
T PLN03224        146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGV--RQDFLK-TGTLAK---------  213 (507)
T ss_pred             CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhh--HHHHHh-hhhhhh---------
Confidence            3889999999999999999642110        00111236789999886532111  111110 000000         


Q ss_pred             HHHHHHHHHHHHHHHhhhCCCC---ccccc------------cccceEEEEcccCccccccccccc--------------
Q psy10135        108 MVRTWAEKEMRNLTRMYSEGLN---VPKPI------------LLKSHVLLMTFIGEDGWPAAKLKD--------------  158 (351)
Q Consensus       108 ~vk~~aekE~~nL~rL~~~gi~---vP~pi------------~~~~~vLVMEfig~~G~~~~~L~~--------------  158 (351)
                      ...-....|...+.++.+..+.   |.+.+            .....+|||||++ +|.....|..              
T Consensus       214 ~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~-~gsL~~~L~~~~~~~~~~L~e~l~  292 (507)
T PLN03224        214 GSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFES-DATLGDALDGKLGPFPGCLEEFMM  292 (507)
T ss_pred             cccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCC-CCcHHHHHhhccCCCcchHHHHHh
Confidence            0000122355555555443221   11111            1234689999996 4433222211              


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        159 -----------TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       159 -----------~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                                 ..++...+..++.|++.+|.+|| ..|+|||||||.|||+. ++.++|+|||.|...
T Consensus       293 ~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH-~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~  359 (507)
T PLN03224        293 AGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLH-RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDM  359 (507)
T ss_pred             cCCchhhhcccccCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCchHhEEECCCCcEEEEeCcCcccc
Confidence                       11344567789999999999999 58999999999999995 588999999998643

>KOG0986|consensus

Probab=99.54  E-value=1.2e-14  Score=144.70  Aligned_cols=164  Identities=20%  Similarity=0.196  Sum_probs=120.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +...++||.|+||.||-+.-+.+        |+.||+|.+...               |++        .+.-...+..|
T Consensus       187 F~~~RvlGkGGFGEV~acqvraT--------GKMYAcKkL~KK---------------RiK--------kr~ge~maLnE  235 (591)
T KOG0986|consen  187 FRVYRVLGKGGFGEVCACQVRAT--------GKMYACKKLDKK---------------RIK--------KRKGETMALNE  235 (591)
T ss_pred             eeeeEEEecccccceeEEEEecc--------hhhHHHHHHHHH---------------HHH--------HhhhhHHhhHH
Confidence            67889999999999999988677        999999976431               111        11223456678


Q ss_pred             HHHHHHhhhCCCCccccccc---cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL---KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      -.+|.++... +-|--.|++   ...||||..+. +|..--.+.+   ..+++..++-++.+|+.+|.+|| +.+||.||
T Consensus       236 k~iL~kV~s~-FiVslaYAfeTkd~LClVLtlMN-GGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH-~~~iVYRD  312 (591)
T KOG0986|consen  236 KQILEKVSSP-FIVSLAYAFETKDALCLVLTLMN-GGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH-RRRIVYRD  312 (591)
T ss_pred             HHHHHHhccC-cEEEEeeeecCCCceEEEEEeec-CCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH-hcceeecc
Confidence            8888888764 323223332   45689999996 4554444443   35888999999999999999999 58999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC------------CCChHHHHHhhhhh-hhhcc
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD------------HPHALQFLRKDCDN-VTVFV  234 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~------------~p~a~~fl~~D~~~-v~~ff  234 (351)
                      |||+|||++ .|+++|.|+|+|+++.            -.+|.+.|..-... ..|||
T Consensus       313 LKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf  370 (591)
T KOG0986|consen  313 LKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWF  370 (591)
T ss_pred             CChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHH
Confidence            999999996 5999999999999873            24566777555433 33677

>KOG1152|consensus

Probab=99.54  E-value=2.5e-14  Score=145.62  Aligned_cols=148  Identities=18%  Similarity=0.225  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.....+|.|+||.|+.|.+...        ...|+||.+..+..-   .+.|+. ++.+.     .         ...|
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n--------~~eVViK~I~KeRIL---~DtWvr-DrkLG-----t---------Vp~E  616 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKEN--------NYEVVIKMIFKERIL---VDTWVR-DRKLG-----T---------VPSE  616 (772)
T ss_pred             ceeeeeccccccceEEEeeeccc--------ceEEEeeehhhhhhh---hhhhhc-ccccC-----c---------cchh
Confidence            88899999999999999999665        788999988764210   111221 00110     0         1258


Q ss_pred             HHHHHHhhh---CC-CCccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYS---EG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~---~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +.+|.+|.+   .+ +.+-..+.. ...+|+||--| .|.-+-.+-+  ..+++.++..+|.|++.++.+|| ..|||||
T Consensus       617 IqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg-~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh-~~~ivhr  694 (772)
T KOG1152|consen  617 IQILATLNKHSHENILKLLDFFEDDDYYYLETEVHG-EGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLH-DQGIVHR  694 (772)
T ss_pred             HHHHHHhhhcCccchhhhhheeecCCeeEEEecCCC-CCcchhhhhhccCccchHHHHHHHHHHHhcccccc-ccCceec
Confidence            888888863   33 233333333 44579999887 5532222222  35888899999999999999999 6999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccc
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av  212 (351)
                      |||-+|++++ +|-++|||||.|.
T Consensus       695 dikdenvivd~~g~~klidfgsaa  718 (772)
T KOG1152|consen  695 DIKDENVIVDSNGFVKLIDFGSAA  718 (772)
T ss_pred             ccccccEEEecCCeEEEeeccchh
Confidence            9999999995 6899999999984

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.53  E-value=2.6e-14  Score=137.55  Aligned_cols=137  Identities=11%  Similarity=0.071  Sum_probs=96.5

Q ss_pred             ceeeec--CceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         41 GCISTG--KEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        41 ~~Ig~G--~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      ..||.|  +++.||+|.+..+        |+.||||+++......                       ... .....|..
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~--------~~~vaiK~~~~~~~~~-----------------------~~~-~~~~~e~~   51 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPT--------GTLVTVRITDLENCTE-----------------------EHL-KALQNEVV   51 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCC--------CcEEEEEEeccccCCH-----------------------HHH-HHHHHHHH
Confidence            356666  9999999998666        9999999987531100                       011 12345677


Q ss_pred             HHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        119 NLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       119 nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      .+..+.+.+| .....+.. ...++||||+. .|.....+..   ..++...+..++.|++.+|.+|| .+|+|||||||
T Consensus        52 ~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH-~~~ivHrDlkp  129 (328)
T cd08226          52 LSHFFRHPNIMTSWTVFTTGSWLWVISPFMA-YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH-QNGYIHRNIKA  129 (328)
T ss_pred             HHHhCCCCCcceEeeeEecCCceEEEEeccc-CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCH
Confidence            7777776654 22222222 34579999995 3333333332   34777888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEcccc
Q psy10135        194 YNMLVH-KATLFIIDVAQS  211 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~A  211 (351)
                      .|||+. ++.++++||+.+
T Consensus       130 ~Nill~~~~~~~~~~~~~~  148 (328)
T cd08226         130 SHILISGDGLVSLSGLSHL  148 (328)
T ss_pred             HHEEEeCCCcEEEechHHH
Confidence            999995 688999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.53  E-value=1.6e-14  Score=133.66  Aligned_cols=145  Identities=11%  Similarity=0.068  Sum_probs=93.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|..... .........++|+|+.......                         ... ....|...|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~-~~~~~~~~~~~~~k~~~~~~~~-------------------------~~~-~~~~e~~~l   53 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREV-GDYGELHKTEVLLKVLDKSHRN-------------------------YSE-SFFEAASMM   53 (258)
T ss_pred             CCCCcccchhheeeeeccc-ccccccccchhhHHhhcchhHH-------------------------HHH-HHHHHHHHH
Confidence            3689999999999987432 0000001234777776432100                         011 123466677


Q ss_pred             HHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      +.+.+.++ .+...+.. ...++||||++ .|.....+..  ..++......++.||+.+|.+|| .+|++||||||.||
T Consensus        54 ~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~iiH~dlkp~ni  131 (258)
T cd05078          54 SQLSHKHLVLNYGVCVCGDESIMVQEYVK-FGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE-DKGLTHGNVCAKNV  131 (258)
T ss_pred             HhCCCCChhheeeEEEeCCCcEEEEecCC-CCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCccceE
Confidence            77765542 22222211 45689999996 3443333332  24677778889999999999999 59999999999999


Q ss_pred             EEeC-C--------eEEEEEccccccC
Q psy10135        197 LVHK-A--------TLFIIDVAQSVEH  214 (351)
Q Consensus       197 Li~~-g--------~l~IIDFG~Av~~  214 (351)
                      |+.. +        .++++|||.+...
T Consensus       132 li~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078         132 LLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             EEecccccccCCCceEEeccccccccc
Confidence            9953 3        2799999988543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.53  E-value=7.1e-14  Score=128.80  Aligned_cols=142  Identities=15%  Similarity=0.059  Sum_probs=94.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|+||.||+|.....     ...+..+|||.+.....                        ...+. ....|...+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~-----~~~~~~~aiK~~~~~~~------------------------~~~~~-~~~~e~~~l   50 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDS-----DGQKIHCAVKSLNRITD------------------------LEEVE-QFLKEGIIM   50 (262)
T ss_pred             CcccccCCceEEEEEEecC-----CCceEEEEEEecCccCC------------------------HHHHH-HHHHHHHHH
Confidence            3689999999999986221     01146799998643110                        00111 123467777


Q ss_pred             HHhhhCCCCcccc-c--cccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        121 TRMYSEGLNVPKP-I--LLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       121 ~rL~~~gi~vP~p-i--~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      +.+.+.++...-- .  ..+..++||||+. .|.....+..  ..++...+..++.+++.++.+|| ..|++|+||||.|
T Consensus        51 ~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlk~~n  128 (262)
T cd05058          51 KDFSHPNVLSLLGICLPSEGSPLVVLPYMK-HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA-SKKFVHRDLAARN  128 (262)
T ss_pred             ccCCCCCcceEEEEeecCCCCcEEEEecCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccCcce
Confidence            7777665421111 1  1134689999995 3443333322  23455667788899999999999 5999999999999


Q ss_pred             eEEe-CCeEEEEEccccccC
Q psy10135        196 MLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+. ++.++|+|||.+...
T Consensus       129 ili~~~~~~kl~dfg~~~~~  148 (262)
T cd05058         129 CMLDESFTVKVADFGLARDI  148 (262)
T ss_pred             EEEcCCCcEEECCccccccc
Confidence            9995 578999999998643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1290|consensus

Probab=99.53  E-value=4.7e-14  Score=141.37  Aligned_cols=128  Identities=20%  Similarity=0.272  Sum_probs=96.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|-|.+.||-|-|++||+|++...        .+.||+||.|...       .|                    .-.+.-
T Consensus        79 RY~v~rKLGWGHFSTVWLawDtq~--------~r~VAlKVvKSAq-------hY--------------------tEaAlD  123 (590)
T KOG1290|consen   79 RYHVQRKLGWGHFSTVWLAWDTQN--------KRYVALKVVKSAQ-------HY--------------------TEAALD  123 (590)
T ss_pred             eEEEEEeccccccceeEEEeeccC--------CeEEEEEEEehhh-------HH--------------------HHHHHH
Confidence            488999999999999999999666        8899999988621       11                    234567


Q ss_pred             HHHHHHHhhhCCC------Cccccccc-------cce-EEEEcccCcccccccccc--c-CCCCHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGL------NVPKPILL-------KSH-VLLMTFIGEDGWPAAKLK--D-TPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       116 E~~nL~rL~~~gi------~vP~pi~~-------~~~-vLVMEfig~~G~~~~~L~--~-~~l~~~~~~~l~~qll~~L~  178 (351)
                      |++.|+++....-      .|.+.++.       +.| |+|+|++|.+  ++..++  . .+++...+++|..||+.+|.
T Consensus       124 EIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdn--LLklI~~s~YrGlpl~~VK~I~~qvL~GLd  201 (590)
T KOG1290|consen  124 EIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDN--LLKLIKYSNYRGLPLSCVKEICRQVLTGLD  201 (590)
T ss_pred             HHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhH--HHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence            9999999876531      11112221       233 7999999622  222222  2 25888899999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEeC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVHK  200 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~~  200 (351)
                      +||.+|||||-||||+|||+--
T Consensus       202 YLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  202 YLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             HHHHhcCccccCCCcceeeeec
Confidence            9999999999999999999953

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.52  E-value=1.7e-13  Score=122.09  Aligned_cols=144  Identities=20%  Similarity=0.184  Sum_probs=105.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||+|++|.||+|....+        +..+|||++......                         .......+|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~--------~~~~~iK~~~~~~~~-------------------------~~~~~~~~e   47 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGT--------GELVAVKVLKKEKTE-------------------------KQREEFLRE   47 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCC--------CcEEEEEeeccccch-------------------------HHHHHHHHH
Confidence            56788999999999999998555        789999998764211                         001123467


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccC-C-CCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDT-P-LTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~-~-l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..+.++.+.++  +..+..    ...+++|||++ .+.....+... . ++...+..++.+++.++..|| .+|++|+|
T Consensus        48 ~~~~~~~~~~~i--~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~d  123 (225)
T smart00221       48 IRILKKLKHPNI--VKLYGVFEDPEPLYLVMEYCE-GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH-SLGIVHRD  123 (225)
T ss_pred             HHHHHhCCCCCh--hhheeeeecCCceEEEEeccC-CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCC
Confidence            788888865542  222221    45679999995 33333333322 2 677888899999999999999 58999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~p  217 (351)
                      |+|.||++. ++.++|+|||.+.....+
T Consensus       124 i~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221      124 LKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            999999996 589999999998766543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.52  E-value=1e-13  Score=129.09  Aligned_cols=146  Identities=12%  Similarity=0.091  Sum_probs=94.2

Q ss_pred             ceeeecCceEEEEEEeCCCcc----cccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYK----IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~----~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.||+|++|.||+|.......    .........+|+|++......                         . ......|
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-------------------------~-~~~~~~~   54 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRD-------------------------I-SLAFFET   54 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhh-------------------------H-HHHHHHH
Confidence            368999999999997522100    000012346888887652110                         0 1112346


Q ss_pred             HHHHHHhhhCCCC-ccccc-cccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|..+.+.+|. +.... .....++||||++ .|.....+.  ...++...+..++.||+.+|.+|| ..||||||||
T Consensus        55 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlk  132 (262)
T cd05077          55 ASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVE-FGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE-DKDLVHGNVC  132 (262)
T ss_pred             HHHHHhCCCCCEeeEEEEEecCCCCEEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh-hCCeECCCCC
Confidence            6777777665532 11111 1234689999995 332222222  235788888999999999999999 5999999999


Q ss_pred             CCceEEeC-C-------eEEEEEccccccC
Q psy10135        193 EYNMLVHK-A-------TLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~~-g-------~l~IIDFG~Av~~  214 (351)
                      |.|||+.. +       .++++|||.+...
T Consensus       133 p~Nill~~~~~~~~~~~~~~l~d~g~~~~~  162 (262)
T cd05077         133 TKNILLAREGIDGECGPFIKLSDPGIPITV  162 (262)
T ss_pred             cccEEEecCCccCCCCceeEeCCCCCCccc
Confidence            99999953 3       2899999988644

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1166|consensus

Probab=99.52  E-value=4.2e-14  Score=153.24  Aligned_cols=140  Identities=19%  Similarity=0.283  Sum_probs=97.7

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCc-hhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSI-LVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~-~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      |..|.|.+.||.|++|.||+|.. .+        |+.||||+-++.. ..|     ||-                     
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~-~~--------~~~~alK~e~P~~~WEf-----YI~---------------------  741 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATH-SN--------GKLVALKVEKPPNPWEF-----YIC---------------------  741 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeec-CC--------CcEEEEEeecCCCceee-----eeh---------------------
Confidence            44589999999999999999998 55        9999999998742 222     221                     


Q ss_pred             HHHHHHHHHHhh----hCCCCccccc-cccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        113 AEKEMRNLTRMY----SEGLNVPKPI-LLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       113 aekE~~nL~rL~----~~gi~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                          -..+.||.    ..-..+-..+ ..+.-+||+||.. -|..+..+-. ..++..-+..+..|++..+.+|| .+||
T Consensus       742 ----~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~-~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH-~~~I  815 (974)
T KOG1166|consen  742 ----LQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSP-YGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLH-AMGI  815 (974)
T ss_pred             ----HHHHHhhchhhhcchHHHHHHHccCCcceeeeeccc-cccHHHhhccCCCCCchhhhHHHHHHHHHHHHHH-hcce
Confidence                01112222    0001111111 2345579999997 5655443332 23566667788999999999999 6999


Q ss_pred             cccCCCCCceEEeC--------CeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVHK--------ATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~~--------g~l~IIDFG~Av~~  214 (351)
                      |||||||.|.|+..        -.++|||||.|+..
T Consensus       816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM  851 (974)
T ss_pred             ecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence            99999999999942        26999999999765

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.51  E-value=4.9e-13  Score=127.59  Aligned_cols=136  Identities=13%  Similarity=0.147  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHhhhCCCCcccccccc---------ceEEEEcccCcccc-cccccc----cCCCCHHHHHHHHHHHHHHH
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILLK---------SHVLLMTFIGEDGW-PAAKLK----DTPLTESGACKLYRECVVMM  177 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~~---------~~vLVMEfig~~G~-~~~~L~----~~~l~~~~~~~l~~qll~~L  177 (351)
                      .+.+|++++.+|...||++|.|+...         ..+||||+++  |. ++..+.    ..+.+......++.+++..+
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~--~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i  151 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLA--PTISLEDYCADWATNPPDPRLKRMLIKRVATMV  151 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCC--CCccHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            36789999999999999999996542         3689999995  43 332221    22344556678999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEeC--------CeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCCc--HHHHH
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVHK--------ATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDD--DEKIF  247 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~~--------g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~~--~~~~~  247 (351)
                      +.|| .+||+|+||++.|||++.        ..+++|||+.+.....+ ...+-..|+..+..-+ .+..+..  ...++
T Consensus       152 ~~LH-~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~~~~~-~~~~r~~dL~~L~~s~-~~~~ls~~d~~~fl  228 (268)
T PRK15123        152 RDMH-AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQIRARV-PRRWRDKDLAGLYFSA-MDIGLTQRDILRFL  228 (268)
T ss_pred             HHHH-HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccccCCC-ChHHHHHHHHHHHHHh-cccCCCHHHHHHHH
Confidence            9999 599999999999999963        58999999988643322 3445566666554221 1122332  45566


Q ss_pred             Hhhhh
Q psy10135        248 KKWDS  252 (351)
Q Consensus       248 ~~~~~  252 (351)
                      ..|..
T Consensus       229 ~~Y~~  233 (268)
T PRK15123        229 RVYFG  233 (268)
T ss_pred             HHHhC
Confidence            66654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.51  E-value=4e-13  Score=122.88  Aligned_cols=119  Identities=23%  Similarity=0.347  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHhhhCCCCccccccccc--------eEEEEcccCcccc-cccccc-c-CCCCHHHHHHHHHHHHHHHHHH
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILLKS--------HVLLMTFIGEDGW-PAAKLK-D-TPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~~~--------~vLVMEfig~~G~-~~~~L~-~-~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      .+.+|++++.+|...||++|+|+....        .+||||++.  |. .+..+. + ..++......++.+++..++.|
T Consensus        57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~--~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALP--GAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCC--CcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence            467899999999999999999997632        389999994  42 333222 1 1245566789999999999999


Q ss_pred             HhhCCccccCCCCCceEEeCC----eEEEEEccccccCCCCChHHHHHhhhhhhhhccc
Q psy10135        181 YNKCHLVHADLSEYNMLVHKA----TLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI  235 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~~g----~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~  235 (351)
                      | .+||+|+||+|.|||++.+    .+++|||+-+.....  +..+-.+|+..+...|.
T Consensus       135 H-~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~--~~~~~~~dL~~L~rs~~  190 (206)
T PF06293_consen  135 H-DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS--SRRWRAKDLARLLRSLL  190 (206)
T ss_pred             H-HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC--ChHHHHHhHHHHHHhcc
Confidence            9 5999999999999999754    599999999875443  66677788888876654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG2345|consensus

Probab=99.51  E-value=7.7e-14  Score=130.17  Aligned_cols=141  Identities=14%  Similarity=0.138  Sum_probs=104.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|+|.+.||+|||+-||.+....+        +..||+|.+.-+..  ++                        .-.+.+
T Consensus        22 Ryri~~~LgeGGfsfv~LV~~~s~--------~~~YAlKkI~c~~~--~~------------------------~e~~~r   67 (302)
T KOG2345|consen   22 RYRIQRLLGEGGFSFVDLVKGLST--------GHLYALKKILCHSQ--ED------------------------IEEALR   67 (302)
T ss_pred             eEEEeeeecCCCceeeeeecccCc--------ccchhhheeeccch--HH------------------------HHHHHH
Confidence            499999999999999999987666        89999998764320  00                        112345


Q ss_pred             HHHHHHHhhhCCCCcccccc---------ccceEEEEcccCccccccccc---c--cCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL---------LKSHVLLMTFIGEDGWPAAKL---K--DTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~---------~~~~vLVMEfig~~G~~~~~L---~--~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      |+++-+++.+..+  -+.++         ...++|++.|.. .|..+..+   +  ..-+++.+...++..|+.+|.+||
T Consensus        68 Eid~~rkf~s~~v--l~l~dh~l~~~~D~~~~~yll~Pyy~-~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH  144 (302)
T KOG2345|consen   68 EIDNHRKFNSPNV--LRLVDHQLREEKDGKHEAYLLLPYYK-RGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH  144 (302)
T ss_pred             HHHHHHhhCCcch--HHHHHHHHHhhccCceeEEEEeehhc-cccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh
Confidence            6666666654331  11111         134689999996 66554432   2  224889999999999999999999


Q ss_pred             hhCC--ccccCCCCCceEEeC-CeEEEEEccccccC
Q psy10135        182 NKCH--LVHADLSEYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~g--lVH~DLkp~NILi~~-g~l~IIDFG~Av~~  214 (351)
                       ...  +.|+||||.|||+++ +.++|+|||.+...
T Consensus       145 -~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  145 -EKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQA  179 (302)
T ss_pred             -ccCCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence             588  999999999999965 99999999999754

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.50  E-value=1.2e-13  Score=131.17  Aligned_cols=143  Identities=10%  Similarity=0.111  Sum_probs=99.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.|++.+|.|+++.||++..  +        |+.||||+++......                        ........
T Consensus         3 ~~~i~~~~~~~~~v~~~~~~~--~--------~~~~avK~~~~~~~~~------------------------~~~~~~~~   48 (314)
T cd08216           3 LTLIGKCFEDLMIVHLAKHKP--T--------NTLVAVKKINLDSCSK------------------------EDLKLLQQ   48 (314)
T ss_pred             hhhhhHhhcCCceEEEEEecC--C--------CCEEEEEEEeccccch------------------------hHHHHHHH
Confidence            355666677776666666554  5        8999999987521100                        01122457


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..|+++.+.+| ++...+. ....+++|||++ .|.....+.   ...++...+..++.|++.+|.+|| ..||||+|
T Consensus        49 Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH-~~~ivH~d  126 (314)
T cd08216          49 EIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA-YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH-SKGFIHRS  126 (314)
T ss_pred             HHHHHHhcCCcchhhhhheeecCCeEEEEEeccC-CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HCCeecCC
Confidence            8888988876553 3222222 234579999996 343322222   234777888899999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.+...
T Consensus       127 lk~~Nili~~~~~~kl~d~~~~~~~  151 (314)
T cd08216         127 VKASHILLSGDGKVVLSGLRYSVSM  151 (314)
T ss_pred             CCcceEEEecCCceEEecCccceee
Confidence            999999995 589999999988643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.50  E-value=1.1e-13  Score=126.97  Aligned_cols=129  Identities=17%  Similarity=0.155  Sum_probs=88.7

Q ss_pred             cCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhh
Q psy10135         46 GKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS  125 (351)
Q Consensus        46 G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~  125 (351)
                      |.++.||+|.+..+        |+.||+|.++.+...                               ..|...+.....
T Consensus         4 g~~~~v~~~~~~~~--------~~~~~~K~i~~~~~~-------------------------------~~~~~~~~~~~~   44 (237)
T cd05576           4 GVIDKVLLVMDTRT--------QQTFILKGLRKSSEY-------------------------------SRERLTIIPHCV   44 (237)
T ss_pred             cccceEEEEEEccC--------CcEEEEEeecchhhh-------------------------------hhHHHHHHhcCC
Confidence            88999999999666        999999998763210                               001111111111


Q ss_pred             CC-CCccccc-cccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CC
Q psy10135        126 EG-LNVPKPI-LLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KA  201 (351)
Q Consensus       126 ~g-i~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g  201 (351)
                      .+ +.+...+ .....+|||||+. +|.....+.. ..++...+..++.|++.+|.+|| +.|++|+||||.|||+. ++
T Consensus        45 ~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH-~~~i~H~dlkp~Nil~~~~~  122 (237)
T cd05576          45 PNMVCLHKYIVSEDSVFLVLQHAE-GGKLWSHISKFLNIPEECVKRWAAEMVVALDALH-REGIVCRDLNPNNILLDDRG  122 (237)
T ss_pred             CceeehhhheecCCeEEEEEecCC-CCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHEEEcCCC
Confidence            11 1111111 1244689999995 4444333332 35888889999999999999999 59999999999999995 68


Q ss_pred             eEEEEEccccccCC
Q psy10135        202 TLFIIDVAQSVEHD  215 (351)
Q Consensus       202 ~l~IIDFG~Av~~~  215 (351)
                      .++++|||.+....
T Consensus       123 ~~~l~df~~~~~~~  136 (237)
T cd05576         123 HIQLTYFSRWSEVE  136 (237)
T ss_pred             CEEEecccchhccc
Confidence            89999999875543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK10345 hypothetical protein; Provisional

Probab=99.50  E-value=2.3e-13  Score=125.44  Aligned_cols=133  Identities=13%  Similarity=0.110  Sum_probs=84.0

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...||+|+++.||.  +..+        +.. +||+.+.....                          ......+|+..
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~--------~~k-~IKv~~~~~~~--------------------------~~~~~~rEi~~   49 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPED--------AQR-CIKIVYHRGDG--------------------------GDKEIRRELKY   49 (210)
T ss_pred             cceecCCCceEEEE--CCCC--------cCe-EEEEEeccccc--------------------------hHHHHHHHHHH
Confidence            36899999999995  4233        444 79988653110                          01123578899


Q ss_pred             HHHhhhCCCCcc---ccccc---c----ceE-EEEcccCcc-cccccccccCCCCHHHHHHHHHHHHHHH-HHHHhhCCc
Q psy10135        120 LTRMYSEGLNVP---KPILL---K----SHV-LLMTFIGED-GWPAAKLKDTPLTESGACKLYRECVVMM-WRLYNKCHL  186 (351)
Q Consensus       120 L~rL~~~gi~vP---~pi~~---~----~~v-LVMEfig~~-G~~~~~L~~~~l~~~~~~~l~~qll~~L-~~LH~~~gl  186 (351)
                      ++.|.+.++..|   +.+..   .    ..+ +||||.|.. |.....+++..+++.  ..++.+++.++ .+|| ..||
T Consensus        50 l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh-~~~I  126 (210)
T PRK10345         50 YAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLL-DNRI  126 (210)
T ss_pred             HHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHH-HCCE
Confidence            998855333233   33321   2    123 789996433 333334444445544  35567777666 8999 5999


Q ss_pred             cccCCCCCceEEeC-----CeEEEEEccccc
Q psy10135        187 VHADLSEYNMLVHK-----ATLFIIDVAQSV  212 (351)
Q Consensus       187 VH~DLkp~NILi~~-----g~l~IIDFG~Av  212 (351)
                      |||||||+|||+..     .+++||||+.+.
T Consensus       127 vhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        127 VTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             eecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            99999999999952     379999955443

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.49  E-value=8.6e-14  Score=128.74  Aligned_cols=145  Identities=17%  Similarity=0.160  Sum_probs=97.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||.|++|.||+|.....  ......+..+|||.+......                       .  ......+|+..|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~--~~~~~~~~~~~iK~~~~~~~~-----------------------~--~~~~~~~e~~~l   53 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDI--LGPGSGPIRVAVKTLRKGATD-----------------------Q--EKKEFLKEAHLM   53 (269)
T ss_pred             CccccccceeEEeeeeccc--ccCcccceeehhhhhhcccch-----------------------h--hHHHHHHHHHHH
Confidence            3689999999999987321  000112468999987542100                       0  011134588888


Q ss_pred             HHhhhCCCC-ccccc-cccceEEEEcccCccccccccccc--------CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        121 TRMYSEGLN-VPKPI-LLKSHVLLMTFIGEDGWPAAKLKD--------TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       121 ~rL~~~gi~-vP~pi-~~~~~vLVMEfig~~G~~~~~L~~--------~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +++.+.+|. +...+ .....++||||+. +|.....+..        ..++..++..++.+++.+|.+|| ..|++|+|
T Consensus        54 ~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~i~H~d  131 (269)
T cd05044          54 SNFNHPNIVKLLGVCLLNEPQYIIMELME-GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE-QMHFIHRD  131 (269)
T ss_pred             HhcCCCCeeeEeeeecCCCCeEEEEeccC-CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH-hCCcccCC
Confidence            888766532 11111 1245689999995 3433332321        23666788899999999999999 59999999


Q ss_pred             CCCCceEEeC-C-----eEEEEEccccccC
Q psy10135        191 LSEYNMLVHK-A-----TLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~~-g-----~l~IIDFG~Av~~  214 (351)
                      |+|.|||+.. +     .++|+|||.+...
T Consensus       132 l~p~nil~~~~~~~~~~~~~l~dfg~~~~~  161 (269)
T cd05044         132 LAARNCLVSEKGYDADRVVKIGDFGLARDI  161 (269)
T ss_pred             CChheEEEecCCCCCCcceEECCccccccc
Confidence            9999999964 4     6999999998644

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG4721|consensus

Probab=99.49  E-value=3.9e-14  Score=144.12  Aligned_cols=130  Identities=20%  Similarity=0.246  Sum_probs=100.6

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||+|+.|.||+|.. .         ++.||||-.+.                                 .-+-++..|
T Consensus       130 eWlGSGaQGAVF~Grl-~---------netVAVKKV~e---------------------------------lkETdIKHL  166 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRL-H---------NETVAVKKVRE---------------------------------LKETDIKHL  166 (904)
T ss_pred             hhhccCcccceeeeec-c---------CceehhHHHhh---------------------------------hhhhhHHHH
Confidence            6799999999999987 3         78999995542                                 124467778


Q ss_pred             HHhhhCCCCcccccc--ccceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        121 TRMYSEGLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      +.|.+.+|-.-+-+-  ..-+|||||||. .|.+..-|+.. .+++.-+..|-.+|+.+|.+||. +.|||||||.-|||
T Consensus       167 RkLkH~NII~FkGVCtqsPcyCIiMEfCa-~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~-hKIIHRDLKSPNiL  244 (904)
T KOG4721|consen  167 RKLKHPNIITFKGVCTQSPCYCIIMEFCA-QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHL-HKIIHRDLKSPNIL  244 (904)
T ss_pred             HhccCcceeeEeeeecCCceeEEeeeccc-cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHH-hhHhhhccCCCceE
Confidence            888765532111110  123579999997 77666667654 47888889999999999999995 89999999999999


Q ss_pred             E-eCCeEEEEEccccccCC
Q psy10135        198 V-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       198 i-~~g~l~IIDFG~Av~~~  215 (351)
                      | .+.-++|.|||.+.+..
T Consensus       245 Is~~d~VKIsDFGTS~e~~  263 (904)
T KOG4721|consen  245 ISYDDVVKISDFGTSKELS  263 (904)
T ss_pred             eeccceEEeccccchHhhh
Confidence            9 57899999999997653

>KOG1345|consensus

Probab=99.48  E-value=6.6e-14  Score=132.20  Aligned_cols=147  Identities=16%  Similarity=0.229  Sum_probs=101.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.|.+.||+|-||.+-+|.++.+        ...+|||.......+.++   ++ .|  |..+|--+            
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s--------~t~ivlKavp~p~tt~~d---F~-rE--fhY~~~Ls------------   78 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQS--------KTRIVLKAVPRPQTTQAD---FV-RE--FHYSFFLS------------   78 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCC--------ceEEEeeccCcchhhHHH---HH-HH--hccceeec------------
Confidence            489999999999999999999777        889999987653322221   11 00  10000000            


Q ss_pred             HHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      -++++..-++.-+.     ..+..+++|||++ -|.+...+...++.+.-.+.++.|++.++.+|| ..+|||||||.+|
T Consensus        79 ~H~hIi~tY~vaFq-----t~d~YvF~qE~aP-~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMH-sknlVHRdlK~eN  151 (378)
T KOG1345|consen   79 PHQHIIDTYEVAFQ-----TSDAYVFVQEFAP-RGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMH-SKNLVHRDLKAEN  151 (378)
T ss_pred             cchhhhHHHHHHhh-----cCceEEEeeccCc-cchhhhhcCcccccHHHHHHHHHHHHHHHHHhh-ccchhhcccccce
Confidence            01111111111011     1134679999998 666666666667888888999999999999999 5899999999999


Q ss_pred             eEEe---CCeEEEEEccccccCC
Q psy10135        196 MLVH---KATLFIIDVAQSVEHD  215 (351)
Q Consensus       196 ILi~---~g~l~IIDFG~Av~~~  215 (351)
                      |||-   .-+++|+|||.+...+
T Consensus       152 iLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  152 ILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             EEEecCCccEEEeeecccccccC
Confidence            9993   3589999999987654

>KOG0579|consensus

Probab=99.47  E-value=1.9e-14  Score=147.66  Aligned_cols=144  Identities=21%  Similarity=0.241  Sum_probs=103.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +++|.|.||.|+||.||+|....+        +-..|-|++-+..-  .....|+.                .+.+.++-
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket--------~~lAAaKvIetkse--EELEDylV----------------EIeILa~C   86 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKET--------KLLAAAKVIETKSE--EELEDYLV----------------EIEILAEC   86 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccc--------hhhhhhhhhcccch--hHHhhhhh----------------hhhhhhcC
Confidence            688999999999999999998655        77788898876321  11122221                22333333


Q ss_pred             HHHHHHHhhhCCCCccccccccceEEEEcccCccccc-ccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWP-AAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~-~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      -+.++..|+.+.      |.-+..+|+.|||| +|.. +..|. ...|++.++.-+..|++.+|.+|| ..+|||||||.
T Consensus        87 dHP~ivkLl~ay------y~enkLwiliEFC~-GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH-s~~iIHRDLKA  158 (1187)
T KOG0579|consen   87 DHPVIVKLLSAY------YFENKLWILIEFCG-GGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH-SQNIIHRDLKA  158 (1187)
T ss_pred             CChHHHHHHHHH------hccCceEEEEeecC-CchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh-hcchhhhhccc
Confidence            455555555441      22356789999997 3422 22222 346899999999999999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEcccccc
Q psy10135        194 YNMLV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~  213 (351)
                      .|||+ -+|.++|.|||.|..
T Consensus       159 GNiL~TldGdirLADFGVSAK  179 (1187)
T KOG0579|consen  159 GNILLTLDGDIRLADFGVSAK  179 (1187)
T ss_pred             cceEEEecCcEeeeccccccc
Confidence            99999 589999999999853

>KOG1167|consensus

Probab=99.47  E-value=5.2e-14  Score=138.78  Aligned_cols=141  Identities=17%  Similarity=0.180  Sum_probs=99.5

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      ..|.+...||.|.|+.||+|.+...     ....+.||||-+....                       .|.   +  ..
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~-----~~~~~~valk~i~~ts-----------------------~p~---r--i~   82 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQ-----DTKRRYVALKAIYRTS-----------------------SPS---R--IL   82 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhh-----ccccceEeeeeccccc-----------------------Cch---H--HH
Confidence            3588999999999999999987441     1127889999765411                       111   1  23


Q ss_pred             HHHHHHHHhhhCC--CCcccccccc-ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        115 KEMRNLTRMYSEG--LNVPKPILLK-SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       115 kE~~nL~rL~~~g--i~vP~pi~~~-~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      .|++.|.++....  +..-..+..+ ..++||+|++. -.. ..+. ..++..+++.+++.++.+|.++| ..||||||+
T Consensus        83 ~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H-~~f-~~l~-~~l~~~~i~~Yl~~ll~Al~~~h-~~GIvHRDi  158 (418)
T KOG1167|consen   83 NELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEH-DRF-RDLY-RSLSLAEIRWYLRNLLKALAHLH-KNGIVHRDI  158 (418)
T ss_pred             HHHHHHHHhccchhhhcchhhhccCCeeEEEecccCc-cCH-HHHH-hcCCHHHHHHHHHHHHHHhhhhh-ccCccccCC
Confidence            5777888775331  2222222223 34699999962 222 1121 23567789999999999999999 599999999


Q ss_pred             CCCceEEe--CCeEEEEEccccc
Q psy10135        192 SEYNMLVH--KATLFIIDVAQSV  212 (351)
Q Consensus       192 kp~NILi~--~g~l~IIDFG~Av  212 (351)
                      ||.|+|+.  -++-+|+|||+|-
T Consensus       159 KpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  159 KPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             CccccccccccCCceEEechhHH
Confidence            99999995  4889999999996

>KOG1151|consensus

Probab=99.47  E-value=4e-14  Score=140.72  Aligned_cols=146  Identities=21%  Similarity=0.217  Sum_probs=106.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhh--ccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD--RDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~--~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |-++.+||.|+|+.||+|.+...        .+.||+||+.... ..++  ...|.                    ..|-
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~E--------qRYvAvKIHqlNK-~WrdEKKeNYh--------------------KHAc  515 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTE--------QRYVAVKIHQLNK-NWRDEKKENYH--------------------KHAC  515 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccch--------hheeeEeeehhcc-chhhHhhhhHH--------------------HHHH
Confidence            66778999999999999998655        7899999986532 1111  01111                    2356


Q ss_pred             HHHHHHHHhhhCCCCcccccc-----ccceEEEEcccCcccccc-cccccCC-CCHHHHHHHHHHHHHHHHHHHh-hCCc
Q psy10135        115 KEMRNLTRMYSEGLNVPKPIL-----LKSHVLLMTFIGEDGWPA-AKLKDTP-LTESGACKLYRECVVMMWRLYN-KCHL  186 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~-----~~~~vLVMEfig~~G~~~-~~L~~~~-l~~~~~~~l~~qll~~L~~LH~-~~gl  186 (351)
                      +|+++-+.|.++.|  .+.|+     ....|-|+|||.  |.-+ ..|++.. +++.+++.+..||+.+|.+|-. +--|
T Consensus       516 REyrIHKeLDHpRI--VKlYDyfslDtdsFCTVLEYce--GNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPI  591 (775)
T KOG1151|consen  516 REYRIHKELDHPRI--VKLYDYFSLDTDSFCTVLEYCE--GNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPI  591 (775)
T ss_pred             HHHhhhhccCccee--eeeeeeeeeccccceeeeeecC--CCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence            78999888876542  22222     255689999995  4333 3466654 7889999999999999999964 2249


Q ss_pred             cccCCCCCceEEeC----CeEEEEEccccccCC
Q psy10135        187 VHADLSEYNMLVHK----ATLFIIDVAQSVEHD  215 (351)
Q Consensus       187 VH~DLkp~NILi~~----g~l~IIDFG~Av~~~  215 (351)
                      ||-||||.|||+.+    |.++|.|||+|...+
T Consensus       592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMd  624 (775)
T KOG1151|consen  592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMD  624 (775)
T ss_pred             eeeccCCccEEEecCcccceeEeeecchhhhcc
Confidence            99999999999954    689999999997553

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.46  E-value=9.1e-13  Score=118.52  Aligned_cols=136  Identities=19%  Similarity=0.200  Sum_probs=97.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|..+.||++.. .+        |..+++|+.......+      .                   ......|+.++
T Consensus         4 ~~l~~G~~n~~~~v~~-~~--------g~~~ilK~~~~~~~~~------~-------------------~~~~~~E~~~~   49 (223)
T cd05154           4 RQLSGGQSNLTYLLTA-GG--------GRRLVLRRPPPGALLP------S-------------------AHDVAREYRVL   49 (223)
T ss_pred             eecCCCccceEEEEEe-cC--------CcceEEEeCCCcccCc------c-------------------cccHHHHHHHH
Confidence            5789999999999987 44        6899999986532100      0                   01235789999


Q ss_pred             HHhhhCCCCcccccccc-------ceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHh----------
Q psy10135        121 TRMYSEGLNVPKPILLK-------SHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYN----------  182 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~-------~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~----------  182 (351)
                      ..|...|+++|+++...       ..++||||++  |..+..... ..++..+...++.+++.+|.+||+          
T Consensus        50 ~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~--G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~  127 (223)
T cd05154          50 RALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD--GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGD  127 (223)
T ss_pred             HHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC--CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcc
Confidence            99998899999988653       3489999994  544333221 235555666667777777777761          


Q ss_pred             ---------------------------------------------hCCccccCCCCCceEEeC---CeEEEEEccccc
Q psy10135        183 ---------------------------------------------KCHLVHADLSEYNMLVHK---ATLFIIDVAQSV  212 (351)
Q Consensus       183 ---------------------------------------------~~glVH~DLkp~NILi~~---g~l~IIDFG~Av  212 (351)
                                                                   ...+||+|++|.|||+.+   +.+.||||+.|.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         128 LGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             cCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                                                         245799999999999965   457899999884

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0194|consensus

Probab=99.45  E-value=1.4e-13  Score=139.90  Aligned_cols=145  Identities=17%  Similarity=0.093  Sum_probs=104.9

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.+.||+|.||.||.|..... .   ......||||..+.+...                       .++......+|.+
T Consensus       161 l~kkLGeGaFGeV~~G~l~~~-~---~~~~~~VAvK~~k~~~~~-----------------------~~~~~~e~m~EAr  213 (474)
T KOG0194|consen  161 LGKKLGEGAFGEVFKGKLKLK-N---GFKVVPVAVKTTKGSSEL-----------------------TKEQIKEFMKEAR  213 (474)
T ss_pred             ccceeecccccEEEEEEEEec-C---CceeeeeEEEeecccccc-----------------------cHHHHHHHHHHHH
Confidence            448999999999999987332 0   000123899988752211                       1122334457999


Q ss_pred             HHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccccCC--CCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        119 NLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDTP--LTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       119 nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~~--l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +|+.|.+.+|  -+.|.    ..-.+||||+|. +|.+...|+..+  ++..+-..+..+.+.+|++|| ..++|||||-
T Consensus       214 vMr~l~H~NV--Vr~yGVa~~~~Pl~ivmEl~~-gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh-~k~~IHRDIA  289 (474)
T KOG0194|consen  214 VMRQLNHPNV--VRFYGVAVLEEPLMLVMELCN-GGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH-SKNCIHRDIA  289 (474)
T ss_pred             HHHhCCCCCE--EEEEEEEcCCCccEEEEEecC-CCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH-HCCCcchhHh
Confidence            9999877652  22222    134579999996 566666676543  888888899999999999999 5899999999


Q ss_pred             CCceEEeC-CeEEEEEccccccC
Q psy10135        193 EYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~~-g~l~IIDFG~Av~~  214 (351)
                      ..|+||+. +.++|.|||+|+.-
T Consensus       290 ARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  290 ARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             HHHheecCCCeEEeCccccccCC
Confidence            99999976 55699999999755

>KOG4645|consensus

Probab=99.45  E-value=4.7e-14  Score=153.77  Aligned_cols=147  Identities=18%  Similarity=0.144  Sum_probs=108.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      ..-+-.||.|.||.||-|.+..+        |.-.|+|-++.....                       .+..+.|+ .|
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~t--------GellAvKEI~iq~~~-----------------------~k~~~~i~-eE 1284 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDT--------GELLAVKEIKIQDSD-----------------------HKTFKLIA-EE 1284 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCc--------cchhhhhhhhcCccc-----------------------cccCcchH-HH
Confidence            44567899999999999998666        999999988753221                       12233444 48


Q ss_pred             HHHHHHhhhCCCCccccccc--cceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL--KSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|..|++.++.-+--+..  ...+|-||||. +|..+..+..++ .++.-.+.++.|++.++.+|| +.|||||||||
T Consensus      1285 m~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~-~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH-~~gIVHRDIK~ 1362 (1509)
T KOG4645|consen 1285 MKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCE-GGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLH-EHGIVHRDIKP 1362 (1509)
T ss_pred             HHHHHhccCccccccCceeecHHHHHHHHHHhc-cCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH-hcCceecCCCc
Confidence            99999998876543333333  23468899995 555544444444 333445677889999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEccccccCCCC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~~~p  217 (351)
                      .||++ .+|-+++.|||.|+.+..+
T Consensus      1363 aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1363 ANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             cceeeecCCcEEeecccceeEecCc
Confidence            99999 4688999999999987544

>KOG0603|consensus

Probab=99.45  E-value=1.2e-13  Score=141.93  Aligned_cols=138  Identities=20%  Similarity=0.134  Sum_probs=98.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++..++|.|+|+.|-.+.+..+        ++..++|++..+..   +.                           .+|
T Consensus       324 y~~~~~~~~gs~s~~~~~~~~~t--------~~~~~vkii~~~~~---~~---------------------------~~e  365 (612)
T KOG0603|consen  324 YEFREELGEGSFSAVKYCESSPT--------DQEPAVKIISKRAD---DN---------------------------QDE  365 (612)
T ss_pred             hccccccCCCCccceeeeecccc--------ccchhheecccccc---cc---------------------------ccc
Confidence            88999999999999999988677        89999999876410   00                           112


Q ss_pred             HHHHHHh--hhCCCCccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRM--YSEGLNVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL--~~~gi~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...+.+.  +..-+..-..+.. ...++|||.+. +|..+.++...+....++..|+.+|+.++.+|| ..|+|||||||
T Consensus       366 ~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~-g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH-~~gvvhRDLkp  443 (612)
T KOG0603|consen  366 IPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD-GGELLRRIRSKPEFCSEASQWAAELVSAVDYLH-EQGVVHRDLKP  443 (612)
T ss_pred             cchhhhhcCCCcceeecceecCCceeeeeehhcc-ccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-hcCeeecCCCh
Confidence            2233222  1211222222322 34579999995 344445554444444678889999999999999 59999999999


Q ss_pred             CceEE--eCCeEEEEEccccccC
Q psy10135        194 YNMLV--HKATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi--~~g~l~IIDFG~Av~~  214 (351)
                      .|||+  ..|+++|+|||++.+.
T Consensus       444 ~NIL~~~~~g~lrltyFG~a~~~  466 (612)
T KOG0603|consen  444 GNILLDGSAGHLRLTYFGFWSEL  466 (612)
T ss_pred             hheeecCCCCcEEEEEechhhhC
Confidence            99999  3588999999999765

>KOG3653|consensus

Probab=99.45  E-value=1.3e-13  Score=137.81  Aligned_cols=145  Identities=19%  Similarity=0.218  Sum_probs=102.6

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.+.||+|+||.||+|..  +        ++.|||||+....     .+.|+ .|+++             ...-..++
T Consensus       213 ~l~eli~~Grfg~V~KaqL--~--------~~~VAVKifp~~~-----kqs~~-~Ek~I-------------y~lp~m~h  263 (534)
T KOG3653|consen  213 QLLELIGRGRFGCVWKAQL--D--------NRLVAVKIFPEQE-----KQSFQ-NEKNI-------------YSLPGMKH  263 (534)
T ss_pred             hhHHHhhcCccceeehhhc--c--------CceeEEEecCHHH-----HHHHH-hHHHH-------------HhccCccc
Confidence            4568899999999999987  2        7899999997521     11111 11000             00011234


Q ss_pred             HHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--------hCCcccc
Q psy10135        118 RNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN--------KCHLVHA  189 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~--------~~glVH~  189 (351)
                      .|+.+...+--..+.  ......||++|-. .|.+-..|+...++-.+...++..|+.+|++||.        +-.|+||
T Consensus       264 ~nIl~Fi~~ekr~t~--~~~eywLVt~fh~-kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHR  340 (534)
T KOG3653|consen  264 ENILQFIGAEKRGTA--DRMEYWLVTEFHP-KGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHR  340 (534)
T ss_pred             hhHHHhhchhccCCc--cccceeEEeeecc-CCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccc
Confidence            455444322111111  1234579999998 7877778888888888999999999999999983        4569999


Q ss_pred             CCCCCceEE-eCCeEEEEEccccccC
Q psy10135        190 DLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||..|||+ .|++..|.|||+|...
T Consensus       341 DlkSkNVLvK~DlTccIaDFGLAl~~  366 (534)
T KOG3653|consen  341 DLKSKNVLVKNDLTCCIADFGLALRL  366 (534)
T ss_pred             cccccceEEccCCcEEeeccceeEEe
Confidence            999999999 5789999999999754

>KOG1035|consensus

Probab=99.44  E-value=1.1e-13  Score=150.30  Aligned_cols=71  Identities=15%  Similarity=0.238  Sum_probs=54.6

Q ss_pred             EEEEcccCccccccccccc-CCC--CHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        140 VLLMTFIGEDGWPAAKLKD-TPL--TESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       140 vLVMEfig~~G~~~~~L~~-~~l--~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||-||||.  -.++..+-+ ..+  ....+..+|++|+++|.++| ..|||||||||-||.++ ++.++|.|||+|..
T Consensus       672 YIQMEyCE--~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH-~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  672 YIQMEYCE--KTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH-DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEHhhhh--hhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH-hCceeeccCCcceeEEcCCCCeeecccccchh
Confidence            56788884  322222222 222  24567899999999999999 59999999999999996 58899999999975

>KOG0587|consensus

Probab=99.44  E-value=4.4e-13  Score=141.74  Aligned_cols=142  Identities=24%  Similarity=0.258  Sum_probs=106.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .++|...||.|.+|.||++....+        |+.+|+||..+..    +.                       ..-.+.
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~--------~~~aa~kI~~~~~----d~-----------------------deEiE~   64 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKT--------GQLAAIKIMDPTE----DE-----------------------EEEIEL   64 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeec--------CceeeeEeecCCc----cc-----------------------cHHHHH
Confidence            578899999999999999998777        9999999986521    11                       112356


Q ss_pred             HHHHHHHhhhCCCCccccccc---------cceEEEEcccCcccccccc---cccCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL---------KSHVLLMTFIGEDGWPAAK---LKDTPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~---------~~~vLVMEfig~~G~~~~~---L~~~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+.+|+.+... -.++..+..         ...+||||||| +|..-..   ++...+.++-+.-+...++.++.+|| +
T Consensus        65 eynil~~~~~h-pnv~~fyg~~~k~~~~~~DqLWLVMEfC~-gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH-~  141 (953)
T KOG0587|consen   65 EYNMLKKYSHH-PNVATFYGAFIKKDPGNGDQLWLVMEFCG-GGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH-N  141 (953)
T ss_pred             HHHHHHhccCC-CCcceEEEEEEEecCCCCCeEEEEeeccC-CccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh-h
Confidence            78888776432 234444332         44689999997 5543222   23345777777788889999999999 5


Q ss_pred             CCccccCCCCCceEE-eCCeEEEEEccccccCC
Q psy10135        184 CHLVHADLSEYNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       184 ~glVH~DLkp~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      ..+||||+|-.|||+ .++.++++|||.|..++
T Consensus       142 nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld  174 (953)
T KOG0587|consen  142 NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  174 (953)
T ss_pred             cceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence            899999999999999 57999999999998764

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=99.43  E-value=4.9e-13  Score=137.86  Aligned_cols=183  Identities=24%  Similarity=0.270  Sum_probs=119.1

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccc----ccc-ccccccccCCChhHHH-
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYV----NGE-FRFRHGYCKKNPRKMV-  109 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv----~ge-~Rfr~~~~k~n~r~~v-  109 (351)
                      .++. ..|+.++-|+||+|+. .+        |+.|||||.+++....-..+-.+    ..- .++-.+-.+-.+...+ 
T Consensus       126 ~eF~~~PiAsASIaQVH~A~L-~s--------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~  196 (517)
T COG0661         126 SEFEPEPIASASIAQVHRAVL-KS--------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVD  196 (517)
T ss_pred             HHcCCCchhhhhHhhheeEEe-cC--------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHH
Confidence            4565 8999999999999999 66        99999999999864332211110    000 0111100001222222 


Q ss_pred             --------HHHHHHHHHHHHHhhhC-----CCCcccccc--ccceEEEEcccCccccccccc---ccCCCCHHHHHHHHH
Q psy10135        110 --------RTWAEKEMRNLTRMYSE-----GLNVPKPIL--LKSHVLLMTFIGEDGWPAAKL---KDTPLTESGACKLYR  171 (351)
Q Consensus       110 --------k~~aekE~~nL~rL~~~-----gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L---~~~~l~~~~~~~l~~  171 (351)
                              .+...+|..|+.++.+.     .+.||+++.  .+..||+|||+  +|.++..+   +..+.+..   .+..
T Consensus       197 e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i--~Gi~i~d~~~l~~~g~d~k---~ia~  271 (517)
T COG0661         197 EFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWI--DGIKISDIAALKSAGIDRK---ELAE  271 (517)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEee--CCEecccHHHHHhcCCCHH---HHHH
Confidence                    23345899999888653     589999995  47889999999  78766544   33445433   3344


Q ss_pred             HHHHH-HHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCCCCCh-------HHHHHhhhhhhhhcc
Q psy10135        172 ECVVM-MWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHA-------LQFLRKDCDNVTVFV  234 (351)
Q Consensus       172 qll~~-L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a-------~~fl~~D~~~v~~ff  234 (351)
                      .++.+ +..+. ..|++|+|.||.||++. +|++.++|||.....+...-       ..++.+|...+..-+
T Consensus       272 ~~~~~f~~q~~-~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~  342 (517)
T COG0661         272 LLVRAFLRQLL-RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELH  342 (517)
T ss_pred             HHHHHHHHHHH-hcCccccCCCccceEEecCCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence            44333 34444 58999999999999995 68999999999987764221       244667776666544

>KOG2052|consensus

Probab=99.43  E-value=6.1e-13  Score=132.26  Aligned_cols=138  Identities=24%  Similarity=0.265  Sum_probs=103.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCc--hhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSI--LVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~--~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -.+.++||+|.||.||+|.+ .         |+.|||||+.+..  .-|+                             |
T Consensus       213 I~L~e~IGkGRyGEVwrG~w-r---------Ge~VAVKiF~srdE~SWfr-----------------------------E  253 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRW-R---------GEDVAVKIFSSRDERSWFR-----------------------------E  253 (513)
T ss_pred             eEEEEEecCccccceeeccc-c---------CCceEEEEecccchhhhhh-----------------------------H
Confidence            46779999999999999998 3         8899999997631  1111                             2


Q ss_pred             HHHHHHHHhhhCCCCcccccc--------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh----
Q psy10135        115 KEMRNLTRMYSEGLNVPKPIL--------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN----  182 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~--------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~----  182 (351)
                      .|+-.-..|++.+|-  ..|+        ....+||.+|-. .|.+...|....++......++..++.+|.+||-    
T Consensus       254 tEIYqTvmLRHENIL--gFIaaD~~~~gs~TQLwLvTdYHe-~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~G  330 (513)
T KOG2052|consen  254 TEIYQTVMLRHENIL--GFIAADNKDNGSWTQLWLVTDYHE-HGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVG  330 (513)
T ss_pred             HHHHHHHHhccchhh--hhhhccccCCCceEEEEEeeeccc-CCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhc
Confidence            233333333332210  0111        134579999998 8888888888889999999999999999999993    


Q ss_pred             ---hCCccccCCCCCceEE-eCCeEEEEEccccccCCC
Q psy10135        183 ---KCHLVHADLSEYNMLV-HKATLFIIDVAQSVEHDH  216 (351)
Q Consensus       183 ---~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~~~~  216 (351)
                         +=.|.|||||..|||+ .+|.+.|.|+|+|+.+++
T Consensus       331 TqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~  368 (513)
T KOG2052|consen  331 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  368 (513)
T ss_pred             CCCCchhhccccccccEEEccCCcEEEeeceeeEEecc
Confidence               2348899999999999 579999999999998753

>KOG0669|consensus

Probab=99.42  E-value=1.8e-14  Score=134.77  Aligned_cols=144  Identities=19%  Similarity=0.233  Sum_probs=101.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|+-...||+|.||.||+|+...+        |+.||+|+.-.      ..++         -||         -.-+.+
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~--------~kkvalkkvlm------eneK---------eGf---------pitalr   65 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNT--------GKKVALKKVLM------ENEK---------EGF---------PITALR   65 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCc--------cchhHHHHHHH------hccc---------cCC---------cHHHHH
Confidence            366678999999999999998666        88899886421      0000         011         122345


Q ss_pred             HHHHHHHhhhCCC----------CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMYSEGL----------NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~~~gi----------~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+.+|..|.+.++          ..|..-.....+|||.||.  -..+-.|.+  .+++..++..+...++.+|.++| +
T Consensus        66 eikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce--hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH-r  142 (376)
T KOG0669|consen   66 EIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE--HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH-R  142 (376)
T ss_pred             HHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh--hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH-H
Confidence            6666666544331          1222111233689999995  333334433  46889999999999999999999 6


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..|+|||+||.|+||. +|.++|.|||.|+..
T Consensus       143 ~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen  143 NKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             hhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence            9999999999999995 699999999999644

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.41  E-value=1.6e-12  Score=116.15  Aligned_cols=133  Identities=22%  Similarity=0.209  Sum_probs=96.0

Q ss_pred             CceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhC
Q psy10135         47 KEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSE  126 (351)
Q Consensus        47 ~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~  126 (351)
                      ++|.||+|....+        |+.+|+|++......-                       .  ......|+..+.++.+.
T Consensus         1 ~~g~v~~~~~~~~--------~~~~~~k~~~~~~~~~-----------------------~--~~~~~~e~~~~~~l~~~   47 (244)
T smart00220        1 SFGKVYLARDKKT--------GKLVAIKVIKKEKIKK-----------------------K--RERILREISILKKLKHP   47 (244)
T ss_pred             CceEEEEEEECCC--------CcEEEEEEeccccccc-----------------------H--HHHHHHHHHHHHhCCCC
Confidence            5789999998556        8999999987632100                       0  12234577777777655


Q ss_pred             CCCcccccc----ccceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-C
Q psy10135        127 GLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-K  200 (351)
Q Consensus       127 gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~  200 (351)
                      ++  +.++.    ....+++|||++ .|.....+.... ++...+..++.+++.++.+|| ..|++|+||+|.||++. +
T Consensus        48 ~i--~~~~~~~~~~~~~~l~~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~~i~~~ni~~~~~  123 (244)
T smart00220       48 NI--VRLYDVFEDEDKLYLVMEYCD-GGDLFDLLKKRGRLSEDEARFYARQILSALEYLH-SNGIIHRDLKPENILLDED  123 (244)
T ss_pred             cH--HHHHhheeeCCEEEEEEeCCC-CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HcCeecCCcCHHHeEECCC
Confidence            43  22222    145689999996 333333333322 777888999999999999999 58999999999999995 5


Q ss_pred             CeEEEEEccccccCCC
Q psy10135        201 ATLFIIDVAQSVEHDH  216 (351)
Q Consensus       201 g~l~IIDFG~Av~~~~  216 (351)
                      +.++|+|||.+.....
T Consensus       124 ~~~~l~d~~~~~~~~~  139 (244)
T smart00220      124 GHVKLADFGLARQLDP  139 (244)
T ss_pred             CcEEEccccceeeecc
Confidence            7999999999976654

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0607|consensus

Probab=99.40  E-value=5.1e-13  Score=128.55  Aligned_cols=137  Identities=18%  Similarity=0.194  Sum_probs=97.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||+|++|.|--+....+        |.+|||||+....           |               +++...-+|...+
T Consensus        84 e~LGeGAyasVqtcv~i~t--------~~EYAVKiidKq~-----------g---------------HsR~RvfREVe~f  129 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQT--------GKEYAVKIIDKQP-----------G---------------HSRSRVFREVETF  129 (463)
T ss_pred             HHhcCccceeeeeeeeecc--------chhhhhhhhhcCC-----------c---------------hHHHHHHHHHHHH
Confidence            6899999999999988677        9999999986531           1               1112223455555


Q ss_pred             HHhhhC-C-CCcccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        121 TRMYSE-G-LNVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       121 ~rL~~~-g-i~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      ...... | +...+.+. ..+.|||||-+. +|..+.++.. .-+++.++..+..+|+.+|..|| ..||.||||||+||
T Consensus       130 ~~Cqgh~nilqLiefFEdd~~FYLVfEKm~-GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH-~kgIAHRDlKPENi  207 (463)
T KOG0607|consen  130 YQCQGHKNILQLIEFFEDDTRFYLVFEKMR-GGPLLSHIQKRKHFNEREASRVVKDIASALDFLH-TKGIAHRDLKPENI  207 (463)
T ss_pred             HHhcCCccHHHHHHHhcccceEEEEEeccc-CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHh-hcCcccccCCccce
Confidence            544321 1 11111111 256789999995 4555555433 45899999999999999999999 59999999999999


Q ss_pred             EEe-C---CeEEEEEcccccc
Q psy10135        197 LVH-K---ATLFIIDVAQSVE  213 (351)
Q Consensus       197 Li~-~---g~l~IIDFG~Av~  213 (351)
                      |-. .   .-++|+||.++..
T Consensus       208 LC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  208 LCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             eecCCCCcCceeeeccccccc
Confidence            993 3   3599999987643

>KOG0696|consensus

Probab=99.39  E-value=3.8e-13  Score=132.88  Aligned_cols=148  Identities=17%  Similarity=0.185  Sum_probs=102.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+..+||.|+||.|.+|..+.+        .+.|||||++.......+.-.-.-.|.|...  ...-            
T Consensus       351 FnFl~VlGKGSFGKVlLaerkgt--------dELyAiKiLkKDViiQdDDvectm~EKrvLA--L~~k------------  408 (683)
T KOG0696|consen  351 FNFLMVLGKGSFGKVLLAERKGT--------DELYAIKILKKDVIIQDDDVECTMVEKRVLA--LPGK------------  408 (683)
T ss_pred             cceEEEeccCccceeeeecccCc--------chhhhhhhhccceeeecCcccceehhhhhee--cCCC------------
Confidence            67889999999999999988666        7889999998743221111111111111110  0000            


Q ss_pred             HHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        117 MRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      -..|..|++. +..     ..+.+.||||+. +|.+...+.+. .+.+..+.-++.+|+-+|-.|| ..|||.||||..|
T Consensus       409 ppFL~qlHSc-FQT-----mDRLyFVMEyvn-GGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh-~kgIiYRDLKLDN  480 (683)
T KOG0696|consen  409 PPFLVQLHSC-FQT-----MDRLYFVMEYVN-GGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLH-SKGIIYRDLKLDN  480 (683)
T ss_pred             CchHHHHHHH-hhh-----hhheeeEEEEec-CchhhhHHHHhcccCCchhhhhhHHHHHHhhhhh-cCCeeeeeccccc
Confidence            1234444443 111     256789999996 56666666554 4666778888999999999999 5999999999999


Q ss_pred             eEEe-CCeEEEEEccccccC
Q psy10135        196 MLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||++ +|+++|.|||+|.+.
T Consensus       481 vmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  481 VMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             eEeccCCceEeeeccccccc
Confidence            9995 799999999999764

>KOG0984|consensus

Probab=99.38  E-value=6.6e-13  Score=121.39  Aligned_cols=166  Identities=17%  Similarity=0.157  Sum_probs=109.2

Q ss_pred             cccchhhhhhhhCChhHHHHHHHHHhcCce-----eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCch
Q psy10135          7 KDKHDRATAEQVMDPRTRMILFKLISRGMV-----SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSIL   81 (351)
Q Consensus         7 ~d~~~~~t~~~v~d~rt~~~L~~l~~~g~~-----y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~   81 (351)
                      +-.+-|.|--.+||.|+.--   +-.++.-     ......||.|++|.|=+-++..+        |...|+|-++... 
T Consensus        16 ~~P~~~~tpp~~Ld~~a~i~---I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~s--------g~imAvKri~~tv-   83 (282)
T KOG0984|consen   16 KLPAPRETPPRNLDSRALIY---IGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQS--------GTIMAVKRIRATV-   83 (282)
T ss_pred             cCCCcCCCCCcccCCCceEE---EecCccccchhhhhhhhhhcCCccchhhheeeccC--------CeEEEEeeehhhc-
Confidence            33456677777787765321   1222210     12346799999999988888667        9999999887532 


Q ss_pred             hhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccc-------cceEEEEcccCccccccc
Q psy10135         82 VFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILL-------KSHVLLMTFIGEDGWPAA  154 (351)
Q Consensus        82 ~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~-------~~~vLVMEfig~~G~~~~  154 (351)
                                            |.+.+.++.  .|..+..|    ..+||-.+..       ...+|-||.+.  .. +.
T Consensus        84 ----------------------n~q~q~r~L--~dldi~~r----~~~CPf~V~FyGa~~regdvwIcME~M~--tS-ld  132 (282)
T KOG0984|consen   84 ----------------------NSQEQKRLL--MDLDIIMR----TVDCPFTVHFYGALFREGDVWICMELMD--TS-LD  132 (282)
T ss_pred             ----------------------ChHHHHHHH--Hhhhhhcc----CCCCCeEEEeehhhhccccEEEeHHHhh--hh-HH
Confidence                                  111122211  12222211    2456654432       45578999993  32 22


Q ss_pred             cc-----c-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE-eCCeEEEEEccccccCC
Q psy10135        155 KL-----K-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       155 ~L-----~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      .+     + ...+++.-+-.++..++.+|.+||.+..+||||+||.|||+ .+|+++|+|||.|.-+.
T Consensus       133 kfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  133 KFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV  200 (282)
T ss_pred             HHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence            22     1 23466666778999999999999999999999999999999 47999999999996543

>KOG1094|consensus

Probab=99.35  E-value=1.1e-12  Score=134.05  Aligned_cols=139  Identities=20%  Similarity=0.204  Sum_probs=104.0

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .|.+.||+|.||.|.+|.. ..        +..||+|++|+...                         +..+....+|+
T Consensus       541 ~~~ekiGeGqFGEVhLCev-eg--------~lkVAVK~Lr~~a~-------------------------~~~r~~F~kEI  586 (807)
T KOG1094|consen  541 RFKEKIGEGQFGEVHLCEV-EG--------PLKVAVKILRPDAT-------------------------KNARNDFLKEI  586 (807)
T ss_pred             ehhhhhcCcccceeEEEEe-cC--------ceEEEEeecCcccc-------------------------hhHHHHHHHHH
Confidence            5679999999999999987 44        68999999987321                         12233456899


Q ss_pred             HHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccccC--C-CCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        118 RNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDT--P-LTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~--~-l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +.|.+|.+++|  .+.+.    ....|+||||+. .|..-..|...  + +..+....+..||+.+|++|- .+++||||
T Consensus       587 kiLsqLkhPNI--veLvGVC~~DePicmI~EYmE-nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe-s~nfVHrd  662 (807)
T KOG1094|consen  587 KILSRLKHPNI--VELLGVCVQDDPLCMITEYME-NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE-SLNFVHRD  662 (807)
T ss_pred             HHHhccCCCCe--eEEEeeeecCCchHHHHHHHh-cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH-hhchhhcc
Confidence            99999977652  12221    244579999997 56543333322  2 233456779999999999997 69999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |-+.|+|++ +.++||+|||+|+.+
T Consensus       663 ~a~rNcLv~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  663 LATRNCLVDGEFTIKIADFGMSRNL  687 (807)
T ss_pred             ccccceeecCcccEEecCccccccc
Confidence            999999996 589999999999743

>KOG0664|consensus

Probab=99.33  E-value=5.5e-13  Score=126.18  Aligned_cols=142  Identities=18%  Similarity=0.199  Sum_probs=92.1

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      +-.+.||-|.||.||.+++-.+        |+.||+|.+..   +|...   + .-.|+                 -+|.
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRd--------grrvalkK~pn---vfq~L---~-s~krv-----------------Fre~  103 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRS--------GKRVALKKMPN---VFQNL---A-SCKRV-----------------FREI  103 (449)
T ss_pred             CCCCcccccceeEEEeccCCCC--------ccchhHhhcch---HHHHH---H-HHHHH-----------------HHHH
Confidence            3458999999999999999667        99999997754   22210   0 00011                 1233


Q ss_pred             HHHHHhhhCC------CCcccccc-ccceEEEEcccCccccccccc-ccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        118 RNLTRMYSEG------LNVPKPIL-LKSHVLLMTFIGEDGWPAAKL-KDTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       118 ~nL~rL~~~g------i~vP~pi~-~~~~vLVMEfig~~G~~~~~L-~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ..|.-..+.+      |--|.-+. ....+.+.|++..+-  -.-+ .-..|+.+.++-+..||+.+|.+|| ..||.||
T Consensus       104 kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDL--HKIIVSPQ~Ls~DHvKVFlYQILRGLKYLH-sA~ILHR  180 (449)
T KOG0664|consen  104 KMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQSDL--HKIIVSPQALTPDHVKVFVYQILRGLKYLH-TANILHR  180 (449)
T ss_pred             HHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhh--hheeccCCCCCcchhhhhHHHHHhhhHHHh-hcchhhc
Confidence            3333333222      11121111 233456777774221  1111 1124777788889999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|+|++ +--++|+|||+|+.-
T Consensus       181 DIKPGNLLVNSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  181 DIKPGNLLVNSNCILKICDFGLARTW  206 (449)
T ss_pred             cCCCccEEeccCceEEeccccccccc
Confidence            9999999995 568999999999744

>KOG0983|consensus

Probab=99.31  E-value=1.7e-12  Score=122.84  Aligned_cols=139  Identities=15%  Similarity=0.177  Sum_probs=91.5

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      ++.+.||.|+-|+|++++.+.+        |...|||..+....                       .-.+-++  ....
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~--------~~iiAVK~M~rt~N-----------------------kee~kRI--LmDl  141 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRST--------GHIIAVKQMRRTGN-----------------------KEENKRI--LMDL  141 (391)
T ss_pred             hhHHhhcCCCccceEEEEEccc--------ceEEEEEeecccCC-----------------------HHHHHHH--HHhh
Confidence            4558899999999999999777        99999998875321                       0001111  1112


Q ss_pred             HHHHHhhhCCCCcccccccc-------ceEEEEcccCc-ccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        118 RNLTRMYSEGLNVPKPILLK-------SHVLLMTFIGE-DGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~~-------~~vLVMEfig~-~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +.+..-+    .||-.+..-       ..+|.||.++. -..++.++ ..++++.-+-.+...++.||.+|-.++|||||
T Consensus       142 dvv~~s~----dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHR  216 (391)
T KOG0983|consen  142 DVVLKSH----DCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHR  216 (391)
T ss_pred             hHHhhcc----CCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeec
Confidence            2222212    244443322       22356888741 01111122 23566655667788899999999889999999


Q ss_pred             CCCCCceEEeC-CeEEEEEccccccC
Q psy10135        190 DLSEYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~~-g~l~IIDFG~Av~~  214 (351)
                      |+||.|||+++ |.++++|||.|..+
T Consensus       217 DvKPSNILlDe~GniKlCDFGIsGrl  242 (391)
T KOG0983|consen  217 DVKPSNILLDERGNIKLCDFGISGRL  242 (391)
T ss_pred             ccCccceEEccCCCEEeeccccccee
Confidence            99999999965 99999999999755

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=99.30  E-value=1.3e-10  Score=107.94  Aligned_cols=154  Identities=21%  Similarity=0.279  Sum_probs=105.2

Q ss_pred             HHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCC
Q psy10135         24 RMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKK  103 (351)
Q Consensus        24 ~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~  103 (351)
                      ...+...++..  |.+.+.+-.....-|.+-..  +        |..+++|..+....   ..++      +|.. +   
T Consensus        22 ~~l~~~i~~~~--~~~~kv~k~~~r~~ValIei--~--------~~kyIlK~pr~~~~---r~er------~~~s-f---   76 (229)
T PF06176_consen   22 LELGEKILDNN--YKIIKVFKNTKRNYVALIEI--D--------GKKYILKEPREENR---RPER------RFKS-F---   76 (229)
T ss_pred             HHHHHHHHhCC--ceEEEeecCCCccEEEEEEE--C--------CcEEEEeccchhhh---hHHH------HHHH-H---
Confidence            33444444444  56777777878888877765  3        88999999876321   1111      1110 0   


Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhCCCCccccccc----------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHH
Q psy10135        104 NPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYREC  173 (351)
Q Consensus       104 n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~ql  173 (351)
                          .-.-.+.+.+.++.++...|+..|.++.+          ...+||||||  +|..+..+.+  +++    .++..+
T Consensus        77 ----~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYI--eG~~l~d~~~--i~e----~~~~ki  144 (229)
T PF06176_consen   77 ----FKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYI--EGVELNDIED--IDE----DLAEKI  144 (229)
T ss_pred             ----hccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEe--cCeecccchh--cCH----HHHHHH
Confidence                00112566788888998889887766421          3456999999  7866554332  222    466778


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccccCC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHD  215 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~  215 (351)
                      .+.+..+| +.|++|||++|.|+|+.++++++|||+......
T Consensus       145 ~~~ikqlH-~~G~~HGD~hpgNFlv~~~~i~iID~~~k~~~~  185 (229)
T PF06176_consen  145 VEAIKQLH-KHGFYHGDPHPGNFLVSNNGIRIIDTQGKRMSN  185 (229)
T ss_pred             HHHHHHHH-HcCCccCCCCcCcEEEECCcEEEEECccccccc
Confidence            88999999 599999999999999999999999998876543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1006|consensus

Probab=99.29  E-value=8.6e-13  Score=124.41  Aligned_cols=135  Identities=16%  Similarity=0.167  Sum_probs=92.0

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      .+.||.|.||.|++-.+.++        |+..|+|.++....                       .+.+.++.  .|+..
T Consensus        69 lg~iG~G~fG~V~KM~hk~s--------g~~mAVKrIr~~n~-----------------------~keq~rll--~e~d~  115 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPS--------GKLMAVKRIRSNNI-----------------------EKEQKRLL--MEHDT  115 (361)
T ss_pred             HHHhcCCcchhhhhhhcCcc--------CcEEEEEEeeeccc-----------------------hHHHHHHH--HHHHH
Confidence            47899999999999998777        99999998875211                       01122221  23322


Q ss_pred             HHHhhhCCCCcccccc-------ccceEEEEcccCccccccccc-------ccCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        120 LTRMYSEGLNVPKPIL-------LKSHVLLMTFIGEDGWPAAKL-------KDTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~-------~~~~vLVMEfig~~G~~~~~L-------~~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      ..+-.    .||..+.       -+..+|-||++.  -. +..|       ++..+++.-+-.+....+.||.+|-....
T Consensus       116 ~mks~----~cp~IVkfyGa~F~EGdcWiCMELMd--~S-lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk  188 (361)
T KOG1006|consen  116 VMKSS----NCPNIVKFYGALFSEGDCWICMELMD--IS-LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK  188 (361)
T ss_pred             HHhhc----CCcHHHHHhhhhhcCCceeeeHHHHh--hh-HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh
Confidence            22211    2333332       256689999993  32 1211       23346665556667778889999987788


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||+||.|||++ .|.++|+|||.|..+
T Consensus       189 iIHRDvKPSNILldr~G~vKLCDFGIcGqL  218 (361)
T KOG1006|consen  189 IIHRDVKPSNILLDRHGDVKLCDFGICGQL  218 (361)
T ss_pred             hhhccCChhheEEecCCCEeeecccchHhH
Confidence            99999999999996 599999999998654

>KOG1095|consensus

Probab=99.29  E-value=1e-11  Score=135.12  Aligned_cols=147  Identities=16%  Similarity=0.118  Sum_probs=105.3

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .++..||+|+||.||+|.. .+.++...  ...||||.++....                         ..-.....+|.
T Consensus       695 ~l~~~lG~G~FG~VY~g~~-~~~~~~~~--~~~vaiK~l~~~~~-------------------------~~~~~~Fl~Ea  746 (1025)
T KOG1095|consen  695 TLLRVLGKGAFGEVYEGTY-SDVPGSVS--PIQVAVKSLKRLSS-------------------------EQEVSDFLKEA  746 (1025)
T ss_pred             EeeeeeccccccceEEEEE-ecCCCCcc--ceEEEEEeccccCC-------------------------HHHHHHHHHHH
Confidence            5779999999999999987 33111100  23488888765310                         01122345688


Q ss_pred             HHHHHhhhCCCCcc--ccccccceEEEEcccCcccccccccccC--------CCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        118 RNLTRMYSEGLNVP--KPILLKSHVLLMTFIGEDGWPAAKLKDT--------PLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       118 ~nL~rL~~~gi~vP--~pi~~~~~vLVMEfig~~G~~~~~L~~~--------~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      .+|..+.+.+|-.-  -.+......|++||+. .|.+...|++.        .|+..++..+..+|+.++.+|+ +.++|
T Consensus       747 ~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~-gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe-~~~fv  824 (1025)
T KOG1095|consen  747 LLMSKFDHPNIVSLIGVCLDSGPPLILLEYME-GGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE-SKHFV  824 (1025)
T ss_pred             HHHhcCCCcceeeEEEeecCCCCcEEEehhcc-cCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH-hCCCc
Confidence            88888876653110  0112245579999997 67666666654        3777899999999999999999 69999


Q ss_pred             ccCCCCCceEEeC-CeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~~-g~l~IIDFG~Av~~  214 (351)
                      ||||...|.|+.. ..+||.|||+|+++
T Consensus       825 HRDLAaRNCLL~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  825 HRDLAARNCLLDERRVVKIADFGLARDI  852 (1025)
T ss_pred             CcchhhhheeecccCcEEEcccchhHhh
Confidence            9999999999964 78999999999844

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.25  E-value=2.3e-11  Score=133.59  Aligned_cols=131  Identities=17%  Similarity=0.188  Sum_probs=91.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.....||+|+||.||+|....+        |..||||.++....        .                      ...|
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~--------~----------------------~~~~  733 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKN--------GMQFVVKEINDVNS--------I----------------------PSSE  733 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCC--------CcEEEEEEccCCcc--------c----------------------cHHH
Confidence            44567899999999999998566        89999998754210        0                      0134


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhh--CCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNK--CHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~--~glVH~D  190 (351)
                      +..|.++.+.+|  .+.+..    ...++||||+. +|.....++  .++..+...++.+++.+|.+||+.  .++||||
T Consensus       734 ~~~l~~l~HpnI--v~~~~~~~~~~~~~lv~Ey~~-~g~L~~~l~--~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~d  808 (968)
T PLN00113        734 IADMGKLQHPNI--VKLIGLCRSEKGAYLIHEYIE-GKNLSEVLR--NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGN  808 (968)
T ss_pred             HHHHhhCCCCCc--ceEEEEEEcCCCCEEEEeCCC-CCcHHHHHh--cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCC
Confidence            566777766653  222221    34589999995 444433333  367778889999999999999942  4899999


Q ss_pred             CCCCceEEeC-CeEEEEEcccc
Q psy10135        191 LSEYNMLVHK-ATLFIIDVAQS  211 (351)
Q Consensus       191 Lkp~NILi~~-g~l~IIDFG~A  211 (351)
                      |||.|||++. +.+++. ||.+
T Consensus       809 lkp~Nil~~~~~~~~~~-~~~~  829 (968)
T PLN00113        809 LSPEKIIIDGKDEPHLR-LSLP  829 (968)
T ss_pred             CCHHhEEECCCCceEEE-eccc
Confidence            9999999965 444443 6554

>KOG4279|consensus

Probab=99.24  E-value=2.7e-11  Score=125.91  Aligned_cols=137  Identities=20%  Similarity=0.234  Sum_probs=92.1

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      +||.|.||.||-|++..+        ....|||-+....      .+++       +      |.       ..|+..-+
T Consensus       582 VLGKGTYG~VYA~RD~~t--------qvrIaIKEIpekd------sr~~-------Q------PL-------hEEIaLH~  627 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDT--------QVRIAIKEIPEKD------SREV-------Q------PL-------HEEIALHS  627 (1226)
T ss_pred             EeecCceeEEEeeccccc--------eeEEEeeeccccc------chhh-------c------cH-------HHHHHHHH
Confidence            699999999999999666        7789999876421      1111       1      11       12333334


Q ss_pred             HhhhCCC-Cccccccccce-EEEEcccCccccccccccc--CCC--CHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        122 RMYSEGL-NVPKPILLKSH-VLLMTFIGEDGWPAAKLKD--TPL--TESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       122 rL~~~gi-~vP~pi~~~~~-vLVMEfig~~G~~~~~L~~--~~l--~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      +|.+.+| .---.+..+.+ -|.||-++ +|.....|+.  +++  .+..+--+..||+++|.+|| .+.|||||||-.|
T Consensus       628 ~LrHkNIVrYLGs~senGf~kIFMEqVP-GGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH-en~IVHRDIKGDN  705 (1226)
T KOG4279|consen  628 TLRHKNIVRYLGSVSENGFFKIFMEQVP-GGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH-ENKIVHRDIKGDN  705 (1226)
T ss_pred             HHhhHhHHHHhhccCCCCeEEEEeecCC-CCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh-hcceeeccccCCc
Confidence            4433321 00000112333 37899997 5655444543  455  44555667789999999999 5999999999999


Q ss_pred             eEEe--CCeEEEEEccccccC
Q psy10135        196 MLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~--~g~l~IIDFG~Av~~  214 (351)
                      +|++  .|-++|.|||.|..+
T Consensus       706 VLvNTySGvlKISDFGTsKRL  726 (1226)
T KOG4279|consen  706 VLVNTYSGVLKISDFGTSKRL  726 (1226)
T ss_pred             EEEeeccceEEecccccchhh
Confidence            9995  599999999999765

>KOG0199|consensus

Probab=99.24  E-value=4.6e-12  Score=131.59  Aligned_cols=145  Identities=17%  Similarity=0.146  Sum_probs=100.4

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      +.+.||+|.||.|++|.+..     +.+.-..||||+++...+.. ..+.                        ..+|..
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~-----psgk~V~VAVKclr~d~l~~-~mdd------------------------flrEas  163 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQ-----PSGKHVNVAVKCLRDDSLNA-IMDD------------------------FLREAS  163 (1039)
T ss_pred             HHHHhcCcceeeEeeccccC-----CCCcEEeEEEEeccCCccch-hHHH------------------------HHHHHH
Confidence            45789999999999998732     22224569999998754321 1111                        123455


Q ss_pred             HHHHhhhCC-CCccccccccceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        119 NLTRMYSEG-LNVPKPILLKSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       119 nL~rL~~~g-i~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      .|.+|.+.. |..--++...-..+|||++. -|.++.+|..+   .|-...+..++.||+.+|.+|- ..++|||||-..
T Consensus       164 ~M~~L~H~hliRLyGvVl~qp~mMV~ELap-lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe-skrlvHRDLAAR  241 (1039)
T KOG0199|consen  164 HMLKLQHPHLIRLYGVVLDQPAMMVFELAP-LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE-SKRLVHRDLAAR  241 (1039)
T ss_pred             HHHhccCcceeEEeeeeccchhhHHhhhcc-cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhh
Confidence            555554322 11100111122347999997 78888888763   3566777889999999999997 589999999999


Q ss_pred             ceEE-eCCeEEEEEccccccCC
Q psy10135        195 NMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       195 NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      |||+ ....++|+|||+++.+.
T Consensus       242 NlllasprtVKI~DFGLmRaLg  263 (1039)
T KOG0199|consen  242 NLLLASPRTVKICDFGLMRALG  263 (1039)
T ss_pred             hheecccceeeeecccceeccC
Confidence            9999 56899999999998763

>KOG0695|consensus

Probab=99.24  E-value=7.9e-12  Score=121.06  Aligned_cols=165  Identities=15%  Similarity=0.177  Sum_probs=112.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+..+||.|++|.|..+....+        .+.|||||++.....-...-.|+                       ..|
T Consensus       252 f~ll~vigrgsyakvl~~~~~~t--------~qiyamkvvkkel~nddedidwv-----------------------qte  300 (593)
T KOG0695|consen  252 FDLLRVIGRGSYAKVLLVRLKKT--------DQIYAMKVVKKELVNDDEDIDWV-----------------------QTE  300 (593)
T ss_pred             ceeeeeecCcchhhhhheehccc--------ceeeehhhHHHHhcCCcccchhH-----------------------Hhh
Confidence            78899999999999999998777        89999999987432111112222                       222


Q ss_pred             HHHHHHhhhCCC--Ccccccc-ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL--NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi--~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      -.........-+  -....+. ..+.++|.||+. +|.+.-.+. +..|+++.++-+-.+|+.+|.+|| ..|||.||||
T Consensus       301 k~vfe~asn~pflvglhscfqtesrlffvieyv~-ggdlmfhmqrqrklpeeharfys~ei~lal~flh-~rgiiyrdlk  378 (593)
T KOG0695|consen  301 KHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN-GGDLMFHMQRQRKLPEEHARFYSAEICLALNFLH-ERGIIYRDLK  378 (593)
T ss_pred             HHHHHhccCCCeEEehhhhhcccceEEEEEEEec-CcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHh-hcCeeeeecc
Confidence            222222111100  0000111 145689999996 455444443 346888888888899999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC-----------CCCC--hHHHHHhhhhhh-hhcc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH-----------DHPH--ALQFLRKDCDNV-TVFV  234 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~-----------~~p~--a~~fl~~D~~~v-~~ff  234 (351)
                      ..|+|++ .|+++|.|+|+|.+-           +.||  |.+.||-+-... .+||
T Consensus       379 ldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdww  435 (593)
T KOG0695|consen  379 LDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWW  435 (593)
T ss_pred             ccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHH
Confidence            9999995 799999999999753           2344  678887665433 3555

>KOG0614|consensus

Probab=99.23  E-value=1.6e-12  Score=131.11  Aligned_cols=146  Identities=19%  Similarity=0.172  Sum_probs=99.7

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      ++...||.|+||.|=++.....        ...+|+|+++....+-...+..+-.|.+.           |.    +.--
T Consensus       423 ~~iaTLGvGgFGRVELV~~~~~--------~~~fAlKilkK~hIVdtkQqeHv~sEr~I-----------m~----~~~s  479 (732)
T KOG0614|consen  423 KRIATLGVGGFGRVELVKVNSQ--------KATFALKILKKKHIVDTKQQEHVFSERNI-----------MM----ECRS  479 (732)
T ss_pred             hhhhhcccCccceEEEEEeccc--------chHHHHHHHhHhhccchhHHHHHHhHHHH-----------HH----hcCc
Confidence            4567899999999999876333        33599999987654443333333222111           11    1112


Q ss_pred             HHHHHhhhCCCCccccccccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        118 RNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      .++.+||.. +.     .....|++||-|- +|....-|++ ..+....++-+..-+++++.+|| +.|||.|||||+|+
T Consensus       480 ~fIvrLYrT-fr-----d~kyvYmLmEaCl-GGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH-~k~iIYRDLKPENl  551 (732)
T KOG0614|consen  480 DFIVRLYRT-FR-----DSKYVYMLMEACL-GGELWTILRDRGSFDDYTARFYVACVLEAFEYLH-RKGIIYRDLKPENL  551 (732)
T ss_pred             hHHHHHHHH-hc-----cchhhhhhHHhhc-CchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH-hcCceeccCChhhe
Confidence            445555543 11     1233468999984 4544445554 45777777778888999999999 69999999999999


Q ss_pred             EE-eCCeEEEEEccccccC
Q psy10135        197 LV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       197 Li-~~g~l~IIDFG~Av~~  214 (351)
                      |+ ++|-++|.|||+|..+
T Consensus       552 lLd~~Gy~KLVDFGFAKki  570 (732)
T KOG0614|consen  552 LLDNRGYLKLVDFGFAKKI  570 (732)
T ss_pred             eeccCCceEEeehhhHHHh
Confidence            99 5699999999999765

>KOG0576|consensus

Probab=99.22  E-value=9.9e-12  Score=128.61  Aligned_cols=142  Identities=18%  Similarity=0.182  Sum_probs=100.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCc-hhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSI-LVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~-~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -|++...+|+|.+|.||+|++..+        |+..|+|+++... -.|+..+                           
T Consensus        16 dyellqrvgsgTygdvyKaRd~~s--------~elaavkvVkLep~dd~~~iq---------------------------   60 (829)
T KOG0576|consen   16 DYELLQRVGSGTYGDVYKARDKRS--------GELAAVKVVKLEPGDDFSGIQ---------------------------   60 (829)
T ss_pred             chhheeeecCCcccchhhhccccc--------CchhhheeeeccCCccccccc---------------------------
Confidence            488889999999999999999777        9999999998642 1222211                           


Q ss_pred             HHHHHHHHhhhCCCC-cccc-ccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        115 KEMRNLTRMYSEGLN-VPKP-ILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       115 kE~~nL~rL~~~gi~-vP~p-i~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      .|+-.++-..+++|. --.. +.....++.|||+|+++  +..+..  .++++.++.-+-++.+.++.++| ..|=+|||
T Consensus        61 qei~~~~dc~h~nivay~gsylr~dklwicMEycgggs--lQdiy~~TgplselqiayvcRetl~gl~ylh-s~gk~hRd  137 (829)
T KOG0576|consen   61 QEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS--LQDIYHVTGPLSELQIAYVCRETLQGLKYLH-SQGKIHRD  137 (829)
T ss_pred             cceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCc--ccceeeecccchhHHHHHHHhhhhccchhhh-cCCccccc
Confidence            122222222222210 0000 11245689999997332  233322  35788888888899999999999 58999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||-.|||+. .|.+++.|||.+.++.
T Consensus       138 iKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen  138 IKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             ccccceeecccCceeecccCchhhhh
Confidence            999999995 5999999999997664

>KOG4257|consensus

Probab=99.20  E-value=2.6e-11  Score=124.91  Aligned_cols=147  Identities=16%  Similarity=0.134  Sum_probs=99.8

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.++||.|-||+||.|.. .+ +  .-+..--||||..|+.-.. .+.+.                        ...|.
T Consensus       392 tl~r~iG~GqFGdVy~gvY-t~-~--~kge~iaVAvKtCK~d~t~-d~tek------------------------flqEa  442 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVY-TD-P--EKGERIAVAVKTCKTDCTP-DDTEK------------------------FLQEA  442 (974)
T ss_pred             cHHHhhcCCcccceeeeEe-cc-c--ccCcceeeeeehhccCCCh-hhHHH------------------------HHHHH
Confidence            4568999999999999987 32 0  0112445999999873211 11111                        12356


Q ss_pred             HHHHHhhhCC-CCccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        118 RNLTRMYSEG-LNVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       118 ~nL~rL~~~g-i~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      -+|+.+.+.. |...-++...-.+||||++. -|.+-..|..  ..|+...+..+..||+.+|.+|| ..+.|||||-..
T Consensus       443 ~iMrnfdHphIikLIGv~~e~P~WivmEL~~-~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe-SkrfVHRDIAaR  520 (974)
T KOG4257|consen  443 SIMRNFDHPHIIKLIGVCVEQPMWIVMELAP-LGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE-SKRFVHRDIAAR  520 (974)
T ss_pred             HHHHhCCCcchhheeeeeeccceeEEEeccc-chhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH-hhchhhhhhhhh
Confidence            6666665442 22222222244589999997 5544344433  34777777788899999999999 589999999999


Q ss_pred             ceEEe-CCeEEEEEccccccCC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||+. ..-++|.|||+|+-.+
T Consensus       521 NiLVsSp~CVKLaDFGLSR~~e  542 (974)
T KOG4257|consen  521 NILVSSPQCVKLADFGLSRYLE  542 (974)
T ss_pred             heeecCcceeeecccchhhhcc
Confidence            99994 6789999999998653

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=99.19  E-value=1.6e-10  Score=107.54  Aligned_cols=128  Identities=16%  Similarity=0.239  Sum_probs=81.7

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||.|..+.||+..            |..+++|++++...                            .....+|+++|
T Consensus         7 ~~i~~G~t~~~y~~~------------~~~~VlR~~~~~~~----------------------------~~~i~~E~~~l   46 (226)
T TIGR02172         7 TQTGEGGNGESYTHK------------TGKWMLKLYNPGFD----------------------------KETIKREFDAS   46 (226)
T ss_pred             eeecCCCCcceeEec------------CCCEEEEeCCCCCC----------------------------HHHHHHHHHHH
Confidence            578999999999842            44689999865210                            11136799999


Q ss_pred             HHhhhCCCCcccccccc----ceEEEEcccCccccc-ccccccCCCCHHHHHHHHHHHHHHHHHHH--------------
Q psy10135        121 TRMYSEGLNVPKPILLK----SHVLLMTFIGEDGWP-AAKLKDTPLTESGACKLYRECVVMMWRLY--------------  181 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~----~~vLVMEfig~~G~~-~~~L~~~~l~~~~~~~l~~qll~~L~~LH--------------  181 (351)
                      ..|...|+++|+|+...    ...+|||+|  +|.+ ...+.  ..+......+..+++..++.||              
T Consensus        47 ~~l~~~glpvP~~~~~~~~~~~~glv~e~i--~G~~~~~~~~--~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~  122 (226)
T TIGR02172        47 RKVFSLGIPTPHPFDLVEDGGRLGLIYELI--VGKRSFSRII--SDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKE  122 (226)
T ss_pred             HHHHHcCCCCCceEEEEecCCeeeeeeeec--CCccchhhhh--cCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHH
Confidence            99999999999999763    237899999  4532 00000  0000111111111111111111              


Q ss_pred             ----------------------------hhCCccccCCCCCceEEeCCeEEEEEccccc
Q psy10135        182 ----------------------------NKCHLVHADLSEYNMLVHKATLFIIDVAQSV  212 (351)
Q Consensus       182 ----------------------------~~~glVH~DLkp~NILi~~g~l~IIDFG~Av  212 (351)
                                                  ....++|+|++|.|||+.++++.||||+.|.
T Consensus       123 ~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~~~iIDwe~a~  181 (226)
T TIGR02172       123 KIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKGTYWIDLGDFG  181 (226)
T ss_pred             HHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCCcEEEechhcC
Confidence                                        1235789999999999987669999999874

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0196|consensus

Probab=99.19  E-value=1.6e-11  Score=128.90  Aligned_cols=141  Identities=21%  Similarity=0.234  Sum_probs=103.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      -.|.++||.|.||.||.|+.+..     ......||||.+|.+... +++..++                        .|
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~p-----gkre~~VAIKTLK~Gyte-kqrrdFL------------------------~E  680 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLP-----GKREITVAIKTLKAGYTE-KQRRDFL------------------------SE  680 (996)
T ss_pred             eEEEEEEecccccceecccccCC-----CCcceeEEEeeeccCccH-HHHhhhh------------------------hh
Confidence            36889999999999999988432     112457999999976432 2222222                        35


Q ss_pred             HHHHHHhhhCCCCccccccc------cc-eEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL------KS-HVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~------~~-~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      ..+|-+..+     |.+|.+      .. ..||.||+. +|.+-..|+  +..++.-++...++-|+.+|++|- ..|.|
T Consensus       681 AsIMGQFdH-----PNIIrLEGVVTks~PvMIiTEyME-NGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs-dm~YV  753 (996)
T KOG0196|consen  681 ASIMGQFDH-----PNIIRLEGVVTKSKPVMIITEYME-NGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS-DMNYV  753 (996)
T ss_pred             hhhcccCCC-----CcEEEEEEEEecCceeEEEhhhhh-CCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh-hcCch
Confidence            555544433     333332      22 358999997 776544444  566888888999999999999997 69999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||-..|||++ +--+||.|||+|+.+
T Consensus       754 HRDLAARNILVNsnLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  754 HRDLAARNILVNSNLVCKVSDFGLSRVL  781 (996)
T ss_pred             hhhhhhhheeeccceEEEeccccceeec
Confidence            999999999996 468999999999766

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.17  E-value=2.8e-10  Score=102.99  Aligned_cols=141  Identities=19%  Similarity=0.213  Sum_probs=98.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...||.|+|+.||++.+           -..+|+|++........                       .......+|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~-----------~~~~~~k~~~~~~~~~~-----------------------~~~~~~~~e   47 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARD-----------RKLVALKVLAKKLESKS-----------------------KEVERFLRE   47 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEe-----------ccEEEEEeechhhccch-----------------------hHHHHHHHH
Confidence            67888999999999999987           25799999876421100                       112223456


Q ss_pred             HHHHHHhhhCC-CC-cccccccc-ceEEEEcccCccccccccc-ccC----CCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEG-LN-VPKPILLK-SHVLLMTFIGEDGWPAAKL-KDT----PLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~g-i~-vP~pi~~~-~~vLVMEfig~~G~~~~~L-~~~----~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ...+..+...+ +. .-..+... ..+++|+++.  |..+..+ ...    .++......+..|++.++.++| ..|++|
T Consensus        48 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H-~~~~~h  124 (384)
T COG0515          48 IQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD--GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH-SKGIIH  124 (384)
T ss_pred             HHHHHHccCCcceeeEEEEEecCCEEEEEEecCC--CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence            66777776552 21 11111122 2489999995  3333322 222    5777888999999999999999 599999


Q ss_pred             cCCCCCceEEeC-C-eEEEEEccccccC
Q psy10135        189 ADLSEYNMLVHK-A-TLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~~-g-~l~IIDFG~Av~~  214 (351)
                      ||+||.|||+.. + .++++|||.+...
T Consensus       125 rd~kp~nil~~~~~~~~~l~dfg~~~~~  152 (384)
T COG0515         125 RDIKPENILLDRDGRVVKLIDFGLAKLL  152 (384)
T ss_pred             cCCCHHHeeecCCCCeEEEeccCcceec
Confidence            999999999964 5 6999999988633

>KOG1235|consensus

Probab=99.17  E-value=1e-10  Score=120.93  Aligned_cols=161  Identities=22%  Similarity=0.213  Sum_probs=107.6

Q ss_pred             eec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhcc--------ccccccccccccccCCChhHH
Q psy10135         38 EVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRD--------KYVNGEFRFRHGYCKKNPRKM  108 (351)
Q Consensus        38 ~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~--------~yv~ge~Rfr~~~~k~n~r~~  108 (351)
                      ++. ..||..+.|+||+|+. .+        |+.|||||.+++...+-..+        .++.   +|-   ..-+..-+
T Consensus       163 ~f~~~piaaASlaQVhrA~L-~~--------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~---k~~---p~~~~~~l  227 (538)
T KOG1235|consen  163 EFDEEPIAAASLAQVHRARL-KN--------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQ---KFF---PDFDLVWL  227 (538)
T ss_pred             hcCcchhhhcchhheEEEEe-cC--------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHH---HhC---cCCchhhH
Confidence            454 8999999999999998 66        99999999999864432211        1111   000   00111112


Q ss_pred             HH---------HHHHHHHHHHHHhhh----C----CCCccccccc--cceEEEEcccCccccccccc---ccCCCCHHHH
Q psy10135        109 VR---------TWAEKEMRNLTRMYS----E----GLNVPKPILL--KSHVLLMTFIGEDGWPAAKL---KDTPLTESGA  166 (351)
Q Consensus       109 vk---------~~aekE~~nL~rL~~----~----gi~vP~pi~~--~~~vLVMEfig~~G~~~~~L---~~~~l~~~~~  166 (351)
                      +.         +...+|.+|..+...    .    -|.+|+++..  ..-||+|||+  +|.+...+   +..+++..  
T Consensus       228 vdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~--~G~~i~Dl~~i~~~gi~~~--  303 (538)
T KOG1235|consen  228 VDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYV--DGIKINDLDAIDKRGISPH--  303 (538)
T ss_pred             HHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEec--CCccCCCHHHHHHcCCCHH--
Confidence            22         223467777766533    1    2669999865  4779999999  67665544   33456654  


Q ss_pred             HHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-----CCeEEEEEccccccCCCCC
Q psy10135        167 CKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-----KATLFIIDVAQSVEHDHPH  218 (351)
Q Consensus       167 ~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-----~g~l~IIDFG~Av~~~~p~  218 (351)
                       .+...+.++...|--..|++|||.||.||++.     ++.+.+.|||+...+.|-.
T Consensus       304 -~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~  359 (538)
T KOG1235|consen  304 -DILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT  359 (538)
T ss_pred             -HHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence             45555555555444468999999999999996     4689999999998887644

>PRK05231 homoserine kinase; Provisional

Probab=99.17  E-value=4.4e-10  Score=108.39  Aligned_cols=174  Identities=17%  Similarity=0.156  Sum_probs=107.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|..+.+|+... .+        | .+++|++.. . ..                           .....|+..+
T Consensus        28 ~~l~~G~~n~~y~v~t-~~--------g-~~vLK~~~~-~-~~---------------------------~~l~~~~~~l   68 (319)
T PRK05231         28 KGIAEGIENSNFFLTT-TQ--------G-EYVLTLFER-L-TA---------------------------EDLPFFLGLM   68 (319)
T ss_pred             chhccccccceEEEEe-CC--------C-cEEEEEecc-C-Ch---------------------------HHhHHHHHHH
Confidence            4578899999999976 43        4 799998751 1 00                           0113467888


Q ss_pred             HHhhhCCCCccccccc----------cceEEEEcccCcccccc---------------cccccC--CC--------CHHH
Q psy10135        121 TRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPA---------------AKLKDT--PL--------TESG  165 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~---------------~~L~~~--~l--------~~~~  165 (351)
                      ..|...|++||+|+..          +..+++|+|+.  |...               .+|...  .+        ...-
T Consensus        69 ~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~--G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~  146 (319)
T PRK05231         69 QHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFLE--GKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAW  146 (319)
T ss_pred             HHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHH
Confidence            8998899999999953          23579999994  4321               111110  00        0000


Q ss_pred             H---------------HHHHHHHHHH-HHHHH------hhCCccccCCCCCceEEeCCeE-EEEEccccccCCCCChHHH
Q psy10135        166 A---------------CKLYRECVVM-MWRLY------NKCHLVHADLSEYNMLVHKATL-FIIDVAQSVEHDHPHALQF  222 (351)
Q Consensus       166 ~---------------~~l~~qll~~-L~~LH------~~~glVH~DLkp~NILi~~g~l-~IIDFG~Av~~~~p~a~~f  222 (351)
                      +               ...+.+.+.. +..+-      -..|+||+|++|.|||++++++ .||||+.|       ...+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~-------~~~~  219 (319)
T PRK05231        147 WRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFA-------CNDK  219 (319)
T ss_pred             HHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccc-------cCCc
Confidence            0               0111111111 11111      1258999999999999988776 69999998       4556


Q ss_pred             HHhhhhhhhhccccC-C-CCC-c-HHHHHHhhhhcCCCCccccc
Q psy10135        223 LRKDCDNVTVFVILN-P-VSD-D-DEKIFKKWDSDYVTSSDEDE  262 (351)
Q Consensus       223 l~~D~~~v~~ff~~~-~-~~~-~-~~~~~~~~~~~~~~~~~~~~  262 (351)
                      ...|+......|..+ + .+. + ...++++|.+..+.++++.+
T Consensus       220 ~~~DlA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~  263 (319)
T PRK05231        220 LLYDVAITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERA  263 (319)
T ss_pred             hHHHHHHHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHH
Confidence            678887665443221 1 222 2 78999999988877666554

>KOG0665|consensus

Probab=99.17  E-value=1.1e-11  Score=119.17  Aligned_cols=142  Identities=18%  Similarity=0.222  Sum_probs=97.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.=...+|.|.- .|..|.+.-.        +++||||..-..   |.+..               +.      ..|.+|
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~--------~~~v~ikk~~~p---f~n~~---------------~a------kra~re   65 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVL--------GRPVAIKKLSRP---FQNQT---------------HA------KRAYRE   65 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhc--------cCceehhhhcCc---cccCc---------------cc------hhhhhh
Confidence            555678899988 7878877555        899999965321   22210               11      123456


Q ss_pred             HHHHHHhhhCCC------Cccccc--cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL------NVPKPI--LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi------~vP~pi--~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..+.-+.+.++      -.|.-.  .....++|||++  ++.. ..+....+....+..++.|++.++++|| +.||+|
T Consensus        66 l~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m--~~nl-~~vi~~elDH~tis~i~yq~~~~ik~lh-s~~Iih  141 (369)
T KOG0665|consen   66 LKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELM--DANL-CQVILMELDHETISYILYQMLCGIKHLH-SAGIIH  141 (369)
T ss_pred             hhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhh--hhHH-HHHHHHhcchHHHHHHHHHHHHHHHHHH-hcceee
Confidence            666666655431      122211  124568999999  3322 2222234666788999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||.||++. +..++|.|||.|+.-+
T Consensus       142 RdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen  142 RDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             cccCcccceecchhheeeccchhhcccC
Confidence            99999999995 6899999999997643

>KOG1027|consensus

Probab=99.17  E-value=3.3e-11  Score=127.22  Aligned_cols=156  Identities=17%  Similarity=0.161  Sum_probs=102.8

Q ss_pred             HHHhcCceeeecceeeecCceE-EEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhH
Q psy10135         29 KLISRGMVSEVNGCISTGKEAN-VYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRK  107 (351)
Q Consensus        29 ~l~~~g~~y~I~~~Ig~G~~a~-VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~  107 (351)
                      +++...+++.=.+.+|.|..|. ||+|.. +         |+.||||.+-...                           
T Consensus       503 ~~v~~k~~~~~~eilG~Gs~Gt~Vf~G~y-e---------~R~VAVKrll~e~---------------------------  545 (903)
T KOG1027|consen  503 KVVVGKLFFSPKEILGYGSNGTVVFRGVY-E---------GREVAVKRLLEEF---------------------------  545 (903)
T ss_pred             ceeeeeeeeccHHHcccCCCCcEEEEEee-C---------CceehHHHHhhHh---------------------------
Confidence            3444455566668899998875 699987 3         8999999543311                           


Q ss_pred             HHHHHHHHHHHHHHHhhhCCCCccccccc-------cceEEEEcccCccccccccc--ccCC-CCHHHHHHHHHHHHHHH
Q psy10135        108 MVRTWAEKEMRNLTRMYSEGLNVPKPILL-------KSHVLLMTFIGEDGWPAAKL--KDTP-LTESGACKLYRECVVMM  177 (351)
Q Consensus       108 ~vk~~aekE~~nL~rL~~~gi~vP~pi~~-------~~~vLVMEfig~~G~~~~~L--~~~~-l~~~~~~~l~~qll~~L  177 (351)
                        -..|.+|+.+|+.-..    .|.++.+       .-.||..|.|...-..+...  .+.. ....+.+.+..|++.+|
T Consensus       546 --~~~A~rEi~lL~eSD~----H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~Gl  619 (903)
T KOG1027|consen  546 --FDFAQREIQLLQESDE----HPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGL  619 (903)
T ss_pred             --HHHHHHHHHHHHhccC----CCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHH
Confidence              1235678888876533    2333322       33579999994211111111  1111 11145678999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEeC------CeEEEEEccccccCC----------------CCChHHHHHhhhh
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVHK------ATLFIIDVAQSVEHD----------------HPHALQFLRKDCD  228 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~~------g~l~IIDFG~Av~~~----------------~p~a~~fl~~D~~  228 (351)
                      ++|| .++||||||||.||||.-      .+++|.|||+|...+                --.|.|.|+.+..
T Consensus       620 aHLH-sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~  691 (903)
T KOG1027|consen  620 AHLH-SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRK  691 (903)
T ss_pred             HHHH-hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhcccc
Confidence            9999 599999999999999942      369999999997653                1235677777663

>KOG1025|consensus

Probab=99.16  E-value=4.1e-11  Score=126.43  Aligned_cols=148  Identities=17%  Similarity=0.107  Sum_probs=101.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      ..-.++||+|+||.||+|.+-+.    ......+||||++......-+ ....                ...+-..+.-+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pe----ge~vKipVaiKvl~~~t~~~~-s~e~----------------LdeAl~masld  756 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPE----GENVKIPVAIKVLIEFTSPKA-SIEL----------------LDEALRMASLD  756 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecC----CceecceeEEEEeeccCCchh-hHHH----------------HHHHHHHhcCC
Confidence            45568999999999999988443    222356899999875321100 0000                11122223334


Q ss_pred             HHHHHHhhhCCCCccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +.||.||....   +    ....-||.+|++ .|.++..++.  ..+.......|..||+++|.+|| ..++|||||-..
T Consensus       757 Hpnl~RLLgvc---~----~s~~qlvtq~mP-~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe-~qrlVHrdLaaR  827 (1177)
T KOG1025|consen  757 HPNLLRLLGVC---M----LSTLQLVTQLMP-LGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE-EQRLVHRDLAAR  827 (1177)
T ss_pred             CchHHHHhhhc---c----cchHHHHHHhcc-cchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-hcchhhhhhhhh
Confidence            55555554321   1    122347899997 6766665554  35777788899999999999999 699999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+|+. .+.++|.|||.|...
T Consensus       828 NVLVksP~hvkitdfgla~ll  848 (1177)
T KOG1025|consen  828 NVLVKSPNHVKITDFGLAKLL  848 (1177)
T ss_pred             heeecCCCeEEEEecchhhcc
Confidence            99995 589999999999754

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=99.16  E-value=5.4e-10  Score=100.55  Aligned_cols=69  Identities=20%  Similarity=0.387  Sum_probs=51.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|..+.||++.. .         +..+++|++...                            .......+|+.++
T Consensus         3 ~~l~~G~~n~~~~v~~-~---------~~~~vlK~~~~~----------------------------~~~~~~~~e~~~~   44 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTT-D---------DGRYVLKFYRPP----------------------------DAAERLRREAAVL   44 (239)
T ss_dssp             EEEEESSSSEEEEEEE-T---------TSEEEEEEESSH----------------------------HHHHHHHHHHHHH
T ss_pred             ccCCCCCeeeEEEEEE-C---------CcEEEEEEeCCC----------------------------CCHHHHHHHHHHH
Confidence            5789999999999987 4         459999997652                            0122345788999


Q ss_pred             HHhhhCCCCccccccc-------cceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILL-------KSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~-------~~~vLVMEfig  147 (351)
                      ..|...|+++|.++..       ...+++|+++.
T Consensus        45 ~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen   45 RQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             HHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             HHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            9999999999999962       12478999994

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1026|consensus

Probab=99.16  E-value=3.9e-11  Score=126.89  Aligned_cols=145  Identities=19%  Similarity=0.188  Sum_probs=105.7

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+...||+|.||.||+|....   ..+......||||.+|....                         ...+...++|+
T Consensus       489 ~~~~eLGegaFGkVf~a~~~~---l~p~~~~~lVAVK~LKd~a~-------------------------~~~~~dF~REa  540 (774)
T KOG1026|consen  489 VFKEELGEGAFGKVFLAEAYG---LLPGQDEQLVAVKALKDKAE-------------------------NQARQDFRREA  540 (774)
T ss_pred             eehhhhcCchhhhhhhhhccC---CCCCccceehhHhhhccccc-------------------------HHHHHHHHHHH
Confidence            456889999999999997622   12222356799998875211                         12344557899


Q ss_pred             HHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc---------------cCCCCHHHHHHHHHHHHHHHH
Q psy10135        118 RNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK---------------DTPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~---------------~~~l~~~~~~~l~~qll~~L~  178 (351)
                      ..|..|.+.+|  .+.+..    .-+++|+||+. .|.+-..|+               ..+|+..+...++.||+.+|.
T Consensus       541 eLla~l~H~nI--VrLlGVC~~~~P~~MvFEYm~-~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~  617 (774)
T KOG1026|consen  541 ELLAELQHPNI--VRLLGVCREGDPLCMVFEYMD-HGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGME  617 (774)
T ss_pred             HHHHhccCCCe--EEEEEEEccCCeeEEEEEecc-cccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999988764  222322    55799999996 444322121               112778899999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEeC-CeEEEEEccccccC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~~-g~l~IIDFG~Av~~  214 (351)
                      +|. .+.+|||||--.|.||.+ -.+||.|||+|+..
T Consensus       618 YLs-~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdi  653 (774)
T KOG1026|consen  618 YLS-SHHFVHRDLATRNCLVGENLVVKISDFGLSRDI  653 (774)
T ss_pred             HHH-hCcccccchhhhhceeccceEEEecccccchhh
Confidence            998 599999999999999965 57999999999754

>KOG0584|consensus

Probab=99.13  E-value=2e-11  Score=125.56  Aligned_cols=167  Identities=16%  Similarity=0.164  Sum_probs=113.1

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEE---EEEeeCCchhhhhccccccccccccccccCCChhHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFA---IKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMV  109 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vA---IKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~v  109 (351)
                      .|..-.....||.|+|=+||+|.+..+        |..||   +|+-...                       .+++.+-
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~--------giEVAWnqvk~~d~~-----------------------q~~~~le   86 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEE--------GIEVAWNQVKIRDVT-----------------------QSPEELE   86 (632)
T ss_pred             CCceeehhhhcccccceeeeecccccc--------chhhHHHHHhHHHhh-----------------------cChHHHH
Confidence            355567789999999999999999655        87776   4432210                       1111111


Q ss_pred             HHHHHHHHHHHHHhhhCCC-Cccccccc---cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        110 RTWAEKEMRNLTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       110 k~~aekE~~nL~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +  ...|++.|+.|.+.+| ..-..+..   ....+|.|++. .|.+-..++. ..++..-++.|.+||+.+|.+||. +
T Consensus        87 R--~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T-SGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs-~  162 (632)
T KOG0584|consen   87 R--LYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT-SGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHS-Q  162 (632)
T ss_pred             H--HHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc-CCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhc-C
Confidence            2  1348889998877653 22211111   22458999997 5654333333 357777889999999999999994 5


Q ss_pred             C--ccccCCCCCceEEeC--CeEEEEEccccccCCC-----------CChHHHHHhhhhhhhhcc
Q psy10135        185 H--LVHADLSEYNMLVHK--ATLFIIDVAQSVEHDH-----------PHALQFLRKDCDNVTVFV  234 (351)
Q Consensus       185 g--lVH~DLkp~NILi~~--g~l~IIDFG~Av~~~~-----------p~a~~fl~~D~~~v~~ff  234 (351)
                      .  |||||||-.||+|.+  |.+||-|+|+|.....           -+|.+.+.....-..|.|
T Consensus       163 ~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVY  227 (632)
T KOG0584|consen  163 DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVY  227 (632)
T ss_pred             CCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHhhhcchhhhhh
Confidence            4  999999999999954  8999999999976543           345566665555555543

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=99.12  E-value=7.3e-10  Score=105.54  Aligned_cols=174  Identities=17%  Similarity=0.156  Sum_probs=107.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|..|..+.+|+... .         +..+++|++....                             ......|++++
T Consensus        20 ~~i~~G~~n~~y~v~~-~---------~~~~vLr~~~~~~-----------------------------~~~~~~e~~~l   60 (296)
T cd05153          20 EGISAGIENTNYFVTT-D---------SGRYVLTLFEKVS-----------------------------AEELPFFLALL   60 (296)
T ss_pred             ecccCccccceEEEEe-C---------CCcEEEEEcCCCC-----------------------------hHhccHHHHHH
Confidence            5788888899999875 3         4579999876410                             01124588999


Q ss_pred             HHhhhCCCCccccccc----------cceEEEEcccCcccccccc---------------cccC--CCCH-------HH-
Q psy10135        121 TRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAAK---------------LKDT--PLTE-------SG-  165 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~~---------------L~~~--~l~~-------~~-  165 (351)
                      ..|...|+++|+|+..          +..++||+|+.  |.....               |...  .+..       .. 
T Consensus        61 ~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~--G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~  138 (296)
T cd05153          61 DHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLA--GEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAW  138 (296)
T ss_pred             HHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCC--CCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHH
Confidence            9999999999999864          23468999994  533211               1100  0000       00 


Q ss_pred             ---------------HHHHHHHHHHHHHHH--H-hhCCccccCCCCCceEEeCCeE-EEEEccccccCCCCChHHHHHhh
Q psy10135        166 ---------------ACKLYRECVVMMWRL--Y-NKCHLVHADLSEYNMLVHKATL-FIIDVAQSVEHDHPHALQFLRKD  226 (351)
Q Consensus       166 ---------------~~~l~~qll~~L~~L--H-~~~glVH~DLkp~NILi~~g~l-~IIDFG~Av~~~~p~a~~fl~~D  226 (351)
                                     ....+...+..+...  . ...++||+|++|.|||++++++ .||||+.|       +......|
T Consensus       139 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a-------~~g~~~~D  211 (296)
T cd05153         139 IRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFA-------CTDAFLYD  211 (296)
T ss_pred             HHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhh-------cCchHHHH
Confidence                           011111122222211  0 0257999999999999987665 79999998       44566778


Q ss_pred             hhhhhhcc--ccCCCCCc--HHHHHHhhhhcCCCCccccc
Q psy10135        227 CDNVTVFV--ILNPVSDD--DEKIFKKWDSDYVTSSDEDE  262 (351)
Q Consensus       227 ~~~v~~ff--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  262 (351)
                      +..+...|  .....+..  .+.++++|.+..+.++++.+
T Consensus       212 la~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~  251 (296)
T cd05153         212 LAITLNDWCFDEDGALDPERAQALLAGYQAVRPLTEAERA  251 (296)
T ss_pred             HHHHHHHHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHH
Confidence            87666543  22222332  78999999887665555443

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09902 hypothetical protein; Provisional

Probab=99.11  E-value=7.1e-10  Score=102.45  Aligned_cols=155  Identities=11%  Similarity=0.105  Sum_probs=105.0

Q ss_pred             eecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHh
Q psy10135         44 STGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRM  123 (351)
Q Consensus        44 g~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL  123 (351)
                      |.||.|-||+... .         |..+-+|-...          ++.+-.|+      .++    +....+|+.+|.+|
T Consensus        27 ~rgG~SgV~r~~~-~---------g~~~ylKrq~n----------hl~~s~r~------P~g----~ptf~rE~~~L~~L   76 (216)
T PRK09902         27 RRNGMSGVQCVER-N---------GKKLYVKRMTH----------HLFHSVRY------PFG----RPTIVREVAVIKEL   76 (216)
T ss_pred             CCCCcceEEEEEe-C---------CcEEEEEeccC----------cccccccC------CCC----chHHHHHHHHHHHH
Confidence            5699999999876 3         66777885432          11111110      111    23346799999999


Q ss_pred             hhCCCCcccccccc--------ceEEEEcccCccccccc-ccccCC---CCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        124 YSEGLNVPKPILLK--------SHVLLMTFIGEDGWPAA-KLKDTP---LTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       124 ~~~gi~vP~pi~~~--------~~vLVMEfig~~G~~~~-~L~~~~---l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ...|+++|+|+...        ..+||.|-++ +-.++. .+.+..   .+...-..++.+++.+++.|| ..|+.|+||
T Consensus        77 ~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~-g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH-~~Gv~Hgdl  154 (216)
T PRK09902         77 ERAGVIVPKIVFGEAVKIEGEWRALLVTEDMA-GFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH-SVNRQHGCC  154 (216)
T ss_pred             HHcCCCCCccceeeeeccCCceEEEEEEEeCC-CCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH-HCCCcCCCC
Confidence            99999999998432        2689999995 222222 233322   344555789999999999999 599999999


Q ss_pred             CCCceEEe-CCe--EEEEEccccccCCCCChHHHHHhhhhhhhh
Q psy10135        192 SEYNMLVH-KAT--LFIIDVAQSVEHDHPHALQFLRKDCDNVTV  232 (351)
Q Consensus       192 kp~NILi~-~g~--l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~  232 (351)
                      -+.|||++ +|.  +.+|||=-+...--..  .=-.+|+..+.+
T Consensus       155 y~khIll~~~g~~~v~lIDlEk~r~~l~~~--~~~~~Dl~~l~r  196 (216)
T PRK09902        155 YVRHIYVKTEGKAEAGFLDLEKSRRRLRRD--KAINHDFRQLEK  196 (216)
T ss_pred             CHhheeecCCCCeeEEEEEhhccchhhhhh--hhhHhHHHHHHH
Confidence            99999996 566  9999997765332111  113567766663

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=99.06  E-value=1.2e-09  Score=101.30  Aligned_cols=29  Identities=31%  Similarity=0.328  Sum_probs=25.3

Q ss_pred             CCccccCCCCCceEEeCCeE-EEEEccccc
Q psy10135        184 CHLVHADLSEYNMLVHKATL-FIIDVAQSV  212 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~g~l-~IIDFG~Av  212 (351)
                      .++||+|++|.|||++++++ .||||+.|.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            45999999999999988775 599999873

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=99.05  E-value=5e-09  Score=102.94  Aligned_cols=190  Identities=15%  Similarity=0.159  Sum_probs=120.8

Q ss_pred             HHHHHHHhcCce-eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCC
Q psy10135         25 MILFKLISRGMV-SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKK  103 (351)
Q Consensus        25 ~~L~~l~~~g~~-y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~  103 (351)
                      .++..+...++- ......|.+ .+..||+... .+        |+ +++|++++. .+                     
T Consensus        15 ~~~~~l~~~~~g~~~~~~~l~s-~eN~~f~~~~-~~--------g~-~iLki~~~~-~~---------------------   61 (331)
T COG2334          15 EAAAALEAYHYGLDGSLRGLNS-EENSNFRVQT-ED--------GR-YILKIYRPG-WT---------------------   61 (331)
T ss_pred             HHHHHHHhcCcCcccccccccc-ccCceEEEEe-cC--------CC-eEEEEecCC-CC---------------------
Confidence            344455555543 233456666 8999999987 54        44 499999874 11                     


Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhCCCCccccccc----------c--ceEEEEcccCcccccccc----------------
Q psy10135        104 NPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILL----------K--SHVLLMTFIGEDGWPAAK----------------  155 (351)
Q Consensus       104 n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~----------~--~~vLVMEfig~~G~~~~~----------------  155 (351)
                            ......|+.+|..|...|++||.|+..          .  .++-|.+|++  |.+...                
T Consensus        62 ------~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~--G~~~~~~~~~~~~~~lG~~Lgr  133 (331)
T COG2334          62 ------RAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLP--GRPLERDDNAEQLEELGRMLGR  133 (331)
T ss_pred             ------HHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecC--CcCcCCCCcHHHHHHHHHHHHH
Confidence                  122356889999999999999999532          4  5678999995  443221                


Q ss_pred             cc----cCC------C-------------------CHH-H---HHHHHHHHHHHHHHHHhhCC--ccccCCCCCceEEeC
Q psy10135        156 LK----DTP------L-------------------TES-G---ACKLYRECVVMMWRLYNKCH--LVHADLSEYNMLVHK  200 (351)
Q Consensus       156 L~----~~~------l-------------------~~~-~---~~~l~~qll~~L~~LH~~~g--lVH~DLkp~NILi~~  200 (351)
                      |.    +.+      +                   ... .   +...+..+...+.......|  +||+|+.|.||++++
T Consensus       134 lH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~  213 (331)
T COG2334         134 LHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDD  213 (331)
T ss_pred             HHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcC
Confidence            00    000      0                   000 0   11111112222222222234  999999999999987


Q ss_pred             Ce--EEEEEccccccCCCCChHHHHHhhhhhhhhcc-ccCCCCCc-HHHHHHhhhhcCCCCccccc
Q psy10135        201 AT--LFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV-ILNPVSDD-DEKIFKKWDSDYVTSSDEDE  262 (351)
Q Consensus       201 g~--l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  262 (351)
                      +.  +-+|||+.|       ...|+..|+.....++ ...+.... +..++++|.++.+.+.++.+
T Consensus       214 ~~~~~g~iDFdDa-------~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~  272 (331)
T COG2334         214 DTDVSGFIDFDDA-------GYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELE  272 (331)
T ss_pred             CCCeeeEEEcccc-------ccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHH
Confidence            64  889999999       5678999998877664 33322222 89999999999987666554

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=99.05  E-value=3.7e-09  Score=101.88  Aligned_cols=176  Identities=16%  Similarity=0.140  Sum_probs=107.8

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...|+.|..+.+|++.. .+        | .+++|+++....                       +     .....|+..
T Consensus        27 i~~~~~G~~n~~y~v~t-~~--------~-~~vLK~~~~~~~-----------------------~-----~~i~~e~~~   68 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTT-DV--------G-RYILTLYEKRVK-----------------------A-----EELPFFLAL   68 (307)
T ss_pred             ccccCCccccceEEEEe-CC--------C-cEEEEEecCCCC-----------------------H-----HHHHHHHHH
Confidence            46778888899999876 33        4 688998764210                       0     012346788


Q ss_pred             HHHhhhCCCCccccccc----------cceEEEEcccCccccccc---------------ccccC--CC--------CHH
Q psy10135        120 LTRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAA---------------KLKDT--PL--------TES  164 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~---------------~L~~~--~l--------~~~  164 (351)
                      +..|...|+++|+|+..          +..++||+|+.  |....               ++...  .+        ...
T Consensus        69 l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~--G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~  146 (307)
T TIGR00938        69 TTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQ--GLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLE  146 (307)
T ss_pred             HHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCC--CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChH
Confidence            88999999999999864          23468999994  43211               11100  00        001


Q ss_pred             HHHHHHH---------------HHHHHHHHHH------hhCCccccCCCCCceEEeCCe-EEEEEccccccCCCCChHHH
Q psy10135        165 GACKLYR---------------ECVVMMWRLY------NKCHLVHADLSEYNMLVHKAT-LFIIDVAQSVEHDHPHALQF  222 (351)
Q Consensus       165 ~~~~l~~---------------qll~~L~~LH------~~~glVH~DLkp~NILi~~g~-l~IIDFG~Av~~~~p~a~~f  222 (351)
                      .+...+.               .+...+..+.      ...++||+|+++.|||++++. +.||||+.|       +..+
T Consensus       147 ~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~-------~~~~  219 (307)
T TIGR00938       147 AWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFA-------CTDA  219 (307)
T ss_pred             HHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccc-------cCcc
Confidence            1111111               1112232231      136899999999999997655 589999998       4456


Q ss_pred             HHhhhhhhhh-ccccC-CCCC--cHHHHHHhhhhcCCCCccccc
Q psy10135        223 LRKDCDNVTV-FVILN-PVSD--DDEKIFKKWDSDYVTSSDEDE  262 (351)
Q Consensus       223 l~~D~~~v~~-ff~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~  262 (351)
                      ...|+..+.. |+... ..+.  -...++++|.+..+.++++.+
T Consensus       220 ~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~  263 (307)
T TIGR00938       220 RAYDLAITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKA  263 (307)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHH
Confidence            6777776654 33211 1122  268999999888776666554

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=99.02  E-value=2.6e-09  Score=100.14  Aligned_cols=162  Identities=17%  Similarity=0.261  Sum_probs=98.3

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .+..|-.+.+|+...  +        |..+++|+...+...+.                          ..-+.|+++|+
T Consensus         3 ~~~~G~tn~~y~~~~--~--------~~~~vlR~~~~~~~~~~--------------------------~~r~~E~~~l~   46 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH--P--------GISFVWRPQSPVCKALG--------------------------VDRQREYQILQ   46 (256)
T ss_pred             cCCCcCcCCeEEEEe--C--------CccEEEeeCCccccccc--------------------------CcHHHHHHHHH
Confidence            456788889998874  3        67899998754321110                          00146999999


Q ss_pred             HhhhCCCCccccccccceEEEEcccCcccccccc------------------cccCC-----CCHH-HHHHHHHHH----
Q psy10135        122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAK------------------LKDTP-----LTES-GACKLYREC----  173 (351)
Q Consensus       122 rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~------------------L~~~~-----l~~~-~~~~l~~ql----  173 (351)
                      .+...|+ +|+++.....++||||+.  |.++..                  |...+     ++.. .+..+..++    
T Consensus        47 ~l~~~g~-~P~~i~~~~~~~v~e~i~--G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~  123 (256)
T TIGR02721        47 ALSALGL-APKPILVNEHWLLVEWLE--GEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPAR  123 (256)
T ss_pred             HHHhcCC-CCceEEEeCCEEEEEecc--CcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccccc
Confidence            9998887 799998877899999994  543221                  11111     1111 111111111    


Q ss_pred             -----HHHHHHHHh-------hCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCC
Q psy10135        174 -----VVMMWRLYN-------KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD  241 (351)
Q Consensus       174 -----l~~L~~LH~-------~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~  241 (351)
                           ...+..+-.       ...++|+|++|.|||+.+++++||||..|. .++      ...|+.++...+    +..
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~~~lIDwE~a~-~gd------p~~DLa~~~~~~----~~~  192 (256)
T TIGR02721       124 RTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQGLKLIDWEYAS-DGD------IALELAAIIRAN----DEE  192 (256)
T ss_pred             CChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCCCEEEeccccC-cCC------HHHHHHHHHHhC----CHH
Confidence                 111111110       135899999999999987779999999883 233      355776655443    222


Q ss_pred             cHHHHHHhhhhc
Q psy10135        242 DDEKIFKKWDSD  253 (351)
Q Consensus       242 ~~~~~~~~~~~~  253 (351)
                      ..+.+++.|...
T Consensus       193 ~~~~~l~~Y~~~  204 (256)
T TIGR02721       193 QQQDFVQRYCQR  204 (256)
T ss_pred             HHHHHHHHHHHh
Confidence            256777777654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG0200|consensus

Probab=99.00  E-value=2.5e-09  Score=112.94  Aligned_cols=149  Identities=18%  Similarity=0.139  Sum_probs=103.5

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+...||+|.||.|++|......+ ........||+|..+.....                         ....+...|+
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~-~~~~~~~~VaVK~~k~~~~~-------------------------~~~~~~~~El  352 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSK-ALLSIYVTVAVKMLKENASS-------------------------SEKKDLMSEL  352 (609)
T ss_pred             cccceeecccccceEeEEEeeccc-ccccceEEEEEEecccccCc-------------------------HHHHHHHHHH
Confidence            455699999999999997521100 00011457999988764321                         1122345678


Q ss_pred             HHHHHhhhC-C-CCccccc-cccceEEEEcccCcccccccccccCC-----------------CCHHHHHHHHHHHHHHH
Q psy10135        118 RNLTRMYSE-G-LNVPKPI-LLKSHVLLMTFIGEDGWPAAKLKDTP-----------------LTESGACKLYRECVVMM  177 (351)
Q Consensus       118 ~nL~rL~~~-g-i~vP~pi-~~~~~vLVMEfig~~G~~~~~L~~~~-----------------l~~~~~~~l~~qll~~L  177 (351)
                      ..|+.+-.. + +...... .....++|+||+. .|..+..|+..+                 ++..++..+..||+.+|
T Consensus       353 ~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~-~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GM  431 (609)
T KOG0200|consen  353 NVLKELGKHPNIVNLLGACTQDGPLYVIVEYAE-HGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGM  431 (609)
T ss_pred             HHHHHhcCCcchhhheeeeccCCceEEEEEecc-CCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHH
Confidence            888877432 1 1111101 1245689999997 676655555444                 78888999999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEeC-CeEEEEEccccccC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~~-g~l~IIDFG~Av~~  214 (351)
                      ++|. ..++|||||-..|||+.. ..++|.|||+|+.+
T Consensus       432 e~L~-~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~  468 (609)
T KOG0200|consen  432 EYLA-SVPCVHRDLAARNVLITKNKVIKIADFGLARDH  468 (609)
T ss_pred             HHHh-hCCccchhhhhhhEEecCCCEEEEccccceecc
Confidence            9999 488999999999999965 58999999999854

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=4.4e-09  Score=94.61  Aligned_cols=135  Identities=25%  Similarity=0.354  Sum_probs=102.3

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.+.|+.|..|.||.+.. .         |..+|+|+-++..               +             +-..++|.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~---------~~~~a~Kvrr~ds---------------~-------------r~~l~kEa   66 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-R---------GGEVALKVRRRDS---------------P-------------RRNLEKEA   66 (201)
T ss_pred             hhhhhhhcccccEEEEeec-c---------CceEEEEEecCCc---------------c-------------hhhHHHHH
Confidence            3458899999999999987 3         7799999977521               1             11246899


Q ss_pred             HHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC-C-Cc
Q psy10135        118 RNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS-E-YN  195 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk-p-~N  195 (351)
                      ++|..+...|+ .|+.+.++..+++|||+  +|.++..+.... +    +.....+++....|- ..||-|+.|+ | .|
T Consensus        67 kiLeil~g~~~-~p~vy~yg~~~i~me~i--~G~~L~~~~~~~-~----rk~l~~vlE~a~~LD-~~GI~H~El~~~~k~  137 (201)
T COG2112          67 KILEILAGEGV-TPEVYFYGEDFIRMEYI--DGRPLGKLEIGG-D----RKHLLRVLEKAYKLD-RLGIEHGELSRPWKN  137 (201)
T ss_pred             HHHHHhhhcCC-CceEEEechhhhhhhhh--cCcchhhhhhcc-c----HHHHHHHHHHHHHHH-HhccchhhhcCCcee
Confidence            99999988875 79999999999999999  787665554322 1    344555666666775 6899999997 4 46


Q ss_pred             eEEeCCeEEEEEccccccCCCCCh
Q psy10135        196 MLVHKATLFIIDVAQSVEHDHPHA  219 (351)
Q Consensus       196 ILi~~g~l~IIDFG~Av~~~~p~a  219 (351)
                      |++.++.++||||..|.....|+-
T Consensus       138 vlv~~~~~~iIDFd~At~k~~p~N  161 (201)
T COG2112         138 VLVNDRDVYIIDFDSATFKKKPRN  161 (201)
T ss_pred             EEecCCcEEEEEccchhhccCCch
Confidence            666778999999999986666553

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.96  E-value=5.6e-09  Score=96.08  Aligned_cols=147  Identities=18%  Similarity=0.216  Sum_probs=90.9

Q ss_pred             ceeeecCceEEEEEEeCC-CcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGA-NYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~-~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ..|+.|-.+.+|++.... +        +..|++|++......+      +                     ..+.|+.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~--------~~~~vlR~~~~~~~~~------~---------------------d~~~E~~~   48 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDN--------QDAVLVRVYGNKTELI------I---------------------DRERELRI   48 (235)
T ss_pred             EEcCCcccceEEEEEcCCCC--------CCeEEEEEccCCccce------e---------------------cHHHHHHH
Confidence            467888899999997622 2        4689999886532110      0                     12468999


Q ss_pred             HHHhhhCCCCccccccccceEEEEcccCccccccc------------------ccccCC--CC----------H-HHHHH
Q psy10135        120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAA------------------KLKDTP--LT----------E-SGACK  168 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~------------------~L~~~~--l~----------~-~~~~~  168 (351)
                      +..|...|+ +|+++......+||||+.  |.++.                  ++....  ..          . ..+..
T Consensus        49 ~~~l~~~gl-~P~v~~~~~~~~l~e~i~--G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~  125 (235)
T cd05157          49 HKLLSKHGL-APKLYATFQNGLIYEFIP--GRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRK  125 (235)
T ss_pred             HHHHHhCCC-CCeEEEEeCCcEEEEeeC--CCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHH
Confidence            999999997 788886656679999994  43321                  111111  10          0 11111


Q ss_pred             HHH----------------------HH---HHHHHHHH----hhCCccccCCCCCceEEeC--CeEEEEEccccccCCCC
Q psy10135        169 LYR----------------------EC---VVMMWRLY----NKCHLVHADLSEYNMLVHK--ATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       169 l~~----------------------ql---l~~L~~LH----~~~glVH~DLkp~NILi~~--g~l~IIDFG~Av~~~~p  217 (351)
                      +..                      .+   +..+....    ...+++|+||+|.|||+.+  +.++||||-.|      
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a------  199 (235)
T cd05157         126 WINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYA------  199 (235)
T ss_pred             HHHHhHHhhccccchhhhhccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccC------
Confidence            111                      11   11222211    1246999999999999975  67999999988      


Q ss_pred             ChHHHHHhhhhhhhh
Q psy10135        218 HALQFLRKDCDNVTV  232 (351)
Q Consensus       218 ~a~~fl~~D~~~v~~  232 (351)
                       +..+...|++++..
T Consensus       200 -~~~~~~~Dla~~~~  213 (235)
T cd05157         200 -GYNYRAFDIANHFN  213 (235)
T ss_pred             -CcCchheeHHHHHH
Confidence             34445667766554

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG4278|consensus

Probab=98.90  E-value=2.2e-09  Score=110.85  Aligned_cols=142  Identities=19%  Similarity=0.212  Sum_probs=97.9

Q ss_pred             eecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         38 EVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        38 ~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+...||-|.||.||.|.+..-        .-.||||.++.......   .       |         .+.+.++-+--+
T Consensus       270 tMkhKLGGGQYGeVYeGvWKky--------slTvAVKtLKEDtMeve---E-------F---------LkEAAvMKeikH  322 (1157)
T KOG4278|consen  270 TMKHKLGGGQYGEVYEGVWKKY--------SLTVAVKTLKEDTMEVE---E-------F---------LKEAAVMKEIKH  322 (1157)
T ss_pred             eeeeccCCCcccceeeeeeecc--------ceeeehhhhhhcchhHH---H-------H---------HHHHHHHHhhcC
Confidence            3457899999999999998554        66899998875322111   0       1         011111122223


Q ss_pred             HHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCC---CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        118 RNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTP---LTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~---l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      .||.+|.  ||...+|    -.|||.||+. .|.++..|+.-.   ++.--+..++.||..+|.+|- +.++|||||-..
T Consensus       323 pNLVqLL--GVCT~Ep----PFYIiTEfM~-yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE-kknFIHRDLAAR  394 (1157)
T KOG4278|consen  323 PNLVQLL--GVCTHEP----PFYIITEFMC-YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE-KKNFIHRDLAAR  394 (1157)
T ss_pred             ccHHHHh--hhhccCC----CeEEEEeccc-CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH-Hhhhhhhhhhhh
Confidence            4454444  3333222    2479999997 787877776532   444456678899999999997 689999999999


Q ss_pred             ceEEeC-CeEEEEEccccccC
Q psy10135        195 NMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~~-g~l~IIDFG~Av~~  214 (351)
                      |.|+.. .-++|.|||+|+..
T Consensus       395 NCLVgEnhiVKvADFGLsRlM  415 (1157)
T KOG4278|consen  395 NCLVGENHIVKVADFGLSRLM  415 (1157)
T ss_pred             hccccccceEEeeccchhhhh
Confidence            999964 56899999999754

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=98.90  E-value=3.3e-08  Score=94.57  Aligned_cols=72  Identities=21%  Similarity=0.339  Sum_probs=52.6

Q ss_pred             CCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccc-cCCCCC--cHHHHHHhhhhcCCCCccc
Q psy10135        184 CHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI-LNPVSD--DDEKIFKKWDSDYVTSSDE  260 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~-~~~~~~--~~~~~~~~~~~~~~~~~~~  260 (351)
                      .+|||+|+++.|||++++.+.||||+.+       ...+..+|+......+. ......  ....++++|.+..+.+.++
T Consensus       187 ~~liHgD~~~~Nil~~~~~i~lIDfd~~-------~~~~~~~Dla~~l~~~~~~~~~~d~~~~~~~l~gY~~~~~L~~~e  259 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKDNEVYVIDFDYC-------TIDLPVRDLRKLIIKLMKKNGVWDLEKAKEIIEAYSSINPLSKEE  259 (313)
T ss_pred             CceEcCCCCcccEEEeCCcEEEEECccc-------ccCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHhhccCCCCHHH
Confidence            5899999999999998888999999987       34455677766554432 222222  2688999999888766665


Q ss_pred             cc
Q psy10135        261 DE  262 (351)
Q Consensus       261 ~~  262 (351)
                      ..
T Consensus       260 ~~  261 (313)
T TIGR02906       260 KE  261 (313)
T ss_pred             HH
Confidence            54

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.85  E-value=7.7e-09  Score=99.71  Aligned_cols=160  Identities=21%  Similarity=0.198  Sum_probs=81.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhh-hcccccccc---ccccccccCCChhHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFK-DRDKYVNGE---FRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk-~~~~yv~ge---~Rfr~~~~k~n~r~~vk~~  112 (351)
                      ...++.||.|+++.||++++..+        |+++|+|++......-. ..+.+....   ..|..   -.||..     
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t--------~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~---~~~p~~-----   77 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVET--------GEEFAVKVFLLPADASANEYEQLKEEQLAITLFPG---VKNPKE-----   77 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------TEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT-----SHHH-----
T ss_pred             EEEccccccCCceEEEEEEEccC--------CceEEEEEEecccccchHHHHHHHHHHHHhhhhcc---CCCHHH-----
Confidence            45679999999999999999777        99999999875321111 111111000   01110   011111     


Q ss_pred             HHHHHHHHHHhhhCCC-Cccccccc---------cceEEEEcccCcccccccc---cccC-CC--CHHH-H-HHHHHHHH
Q psy10135        113 AEKEMRNLTRMYSEGL-NVPKPILL---------KSHVLLMTFIGEDGWPAAK---LKDT-PL--TESG-A-CKLYRECV  174 (351)
Q Consensus       113 aekE~~nL~rL~~~gi-~vP~pi~~---------~~~vLVMEfig~~G~~~~~---L~~~-~l--~~~~-~-~~l~~qll  174 (351)
                      |....+.|.-+.-.-+ ..|..+..         -+.+++|.-+.  +.....   |... ..  .... + ..+..|++
T Consensus        78 a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~--~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I  155 (288)
T PF14531_consen   78 AYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ--GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMI  155 (288)
T ss_dssp             HHHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S--EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHH
T ss_pred             HHHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhh--hcHHHHHHHHhhcccccchhHHHHHHHHHHHHH
Confidence            1111122221110000 01111111         13356777663  322111   1111 11  1111 2 34557899


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ..++.+| ..||||+||+|.|+++. +|.++|.||+..+..+
T Consensus       156 ~lvA~Lh-~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g  196 (288)
T PF14531_consen  156 RLVANLH-SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAG  196 (288)
T ss_dssp             HHHHHHH-HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETT
T ss_pred             HHHHHHh-hcceEecccceeeEEEcCCCCEEEcChHHHeecC
Confidence            9999999 59999999999999995 7999999999887665

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.85  E-value=2.4e-08  Score=92.65  Aligned_cols=69  Identities=25%  Similarity=0.303  Sum_probs=48.6

Q ss_pred             eeeecCc-eEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         42 CISTGKE-ANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        42 ~Ig~G~~-a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      .|..|.. +.||+... .         +..++||+.....  .                           ....+|+++|
T Consensus         5 ~~~~g~~~~~v~~~~~-~---------~~~~~vk~~~~~~--~---------------------------~~~~~E~~~l   45 (244)
T cd05150           5 RVTEGQSGATVYRLDG-K---------NPGLYLKIAPSGP--T---------------------------YELEREAERL   45 (244)
T ss_pred             ecCCCCCcCeEEEEcC-C---------CCcEEEEecCCCc--c---------------------------cchHHHHHHH
Confidence            4555555 88899865 2         5689999875421  0                           0124689999


Q ss_pred             HHhhhCCCCcccccccc----ceEEEEcccCccccc
Q psy10135        121 TRMYSEGLNVPKPILLK----SHVLLMTFIGEDGWP  152 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~----~~vLVMEfig~~G~~  152 (351)
                      ..|... +++|+++...    ..+|||+++  .|.+
T Consensus        46 ~~l~~~-~~vP~v~~~~~~~~~~~lv~e~i--~G~~   78 (244)
T cd05150          46 RWLAGK-LPVPEVIDYGSDDGRAWLLTSAV--PGVP   78 (244)
T ss_pred             HHHHhc-CCCCeEEEEEecCCccEEEEEee--CCcc
Confidence            999887 8999999753    368999999  4543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK11768 serine/threonine protein kinase; Provisional

Probab=98.84  E-value=3.7e-08  Score=96.26  Aligned_cols=168  Identities=11%  Similarity=0.079  Sum_probs=100.1

Q ss_pred             eecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHh
Q psy10135         44 STGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRM  123 (351)
Q Consensus        44 g~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL  123 (351)
                      -.|.+..||+... .+        |..+++|++++...                           .......|+.++..|
T Consensus        34 l~s~eN~vy~v~~-~~--------~~~~vlKv~r~~~~---------------------------~~~~i~~E~~~l~~L   77 (325)
T PRK11768         34 LNSYENRVYQFGD-ED--------GRRVVAKFYRPERW---------------------------SDAQILEEHAFALEL   77 (325)
T ss_pred             eccccceEEEEec-CC--------CCEEEEEEcCcccC---------------------------CHHHHHHHHHHHHHH
Confidence            4457889999987 55        78899999976320                           012234688999999


Q ss_pred             hhCCCCccccccc---------cceEEEEcccCccccc---------------ccccccC----C------CCHH-----
Q psy10135        124 YSEGLNVPKPILL---------KSHVLLMTFIGEDGWP---------------AAKLKDT----P------LTES-----  164 (351)
Q Consensus       124 ~~~gi~vP~pi~~---------~~~vLVMEfig~~G~~---------------~~~L~~~----~------l~~~-----  164 (351)
                      ...|++||.|+..         +..+.|++|++  |..               +.+|...    +      ++..     
T Consensus        78 ~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~--G~~~~~~~~~~~~~lG~~LarlH~~~~~~~~~~r~~~~~~~~~~~  155 (325)
T PRK11768         78 AEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG--GRAPELDNLDQLEWVGRFLGRIHQVGAKRPFEHRPTLDLQEYGIE  155 (325)
T ss_pred             HHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC--CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCCCCcCCHHHHHHH
Confidence            9999999988643         22356888885  322               1111110    0      1100     


Q ss_pred             -------------H----HHHHHHHHHHHHHHHH----hhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHH
Q psy10135        165 -------------G----ACKLYRECVVMMWRLY----NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFL  223 (351)
Q Consensus       165 -------------~----~~~l~~qll~~L~~LH----~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl  223 (351)
                                   .    ...++.+++..+....    ...|+||+|+++.|||+.+ .+.||||+.|.       ..+.
T Consensus       156 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~d-~~~iIDFDd~~-------~g~~  227 (325)
T PRK11768        156 PRDWLLASDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWRD-GPHFVDLDDAR-------MGPA  227 (325)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhccccC-CcEEEeCCCCC-------CCCH
Confidence                         0    1122222322223321    1357999999999999965 68999999994       3444


Q ss_pred             HhhhhhhhhccccCCCCCc-HHHHHHhhhhcCCCCcc
Q psy10135        224 RKDCDNVTVFVILNPVSDD-DEKIFKKWDSDYVTSSD  259 (351)
Q Consensus       224 ~~D~~~v~~ff~~~~~~~~-~~~~~~~~~~~~~~~~~  259 (351)
                      ..|+..+.......  ... ...++++|.+..+.+..
T Consensus       228 i~DLa~~l~~~~~~--~~~~~~~~l~GY~~~r~l~~~  262 (325)
T PRK11768        228 VQDLWMLLSGDRAE--QLMQLETLLEGYEEFCEFDPR  262 (325)
T ss_pred             HHHHHHHhccCcch--hHHHHHHHHHHhhccCCCCHH
Confidence            55665433221111  112 67888888877764443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.83  E-value=4.4e-09  Score=113.93  Aligned_cols=78  Identities=8%  Similarity=-0.018  Sum_probs=55.6

Q ss_pred             HHHHhhhCC-CCccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        119 NLTRMYSEG-LNVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       119 nL~rL~~~g-i~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      +++++...- ...|..+.....+++|||.+  +.+...|..  ..++..++..++.||+.+|.+|| .+|||||||||.|
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-~~gIvHrDlKP~N  110 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECED--VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH-SQGIVVHNVRPSC  110 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccCC--ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH-hCCeeeccCCchh
Confidence            555554421 12233333345578899984  544444433  34888899999999999999999 5999999999999


Q ss_pred             eEEe
Q psy10135        196 MLVH  199 (351)
Q Consensus       196 ILi~  199 (351)
                      ||+.
T Consensus       111 iLl~  114 (793)
T PLN00181        111 FVMS  114 (793)
T ss_pred             EEEc
Confidence            9994

>PLN02876 acyl-CoA dehydrogenase

Probab=98.78  E-value=1e-07  Score=104.07  Aligned_cols=77  Identities=16%  Similarity=0.225  Sum_probs=52.2

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...|+.|..+.+|+......      +....+++|...+......                         .....+|+++
T Consensus        43 v~~l~gG~sn~ty~l~~~~~------~~~~~~VLR~~p~~~~~~~-------------------------~~~~~rE~~~   91 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNG------GSVKRYVLRKKPPGKLLQS-------------------------AHAVEREYQV   91 (822)
T ss_pred             EEEeCCCCcCceEEEEECCC------CcceeEEEEeCCCCccCcc-------------------------HHHHHHHHHH
Confidence            46789999999999876221      0014688887654321000                         1124579999


Q ss_pred             HHHhh-hCCCCccccccc-------cceEEEEcccC
Q psy10135        120 LTRMY-SEGLNVPKPILL-------KSHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~-~~gi~vP~pi~~-------~~~vLVMEfig  147 (351)
                      |..|. ..++++|+++..       +..++||||+.
T Consensus        92 l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~  127 (822)
T PLN02876         92 LRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLE  127 (822)
T ss_pred             HHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecC
Confidence            99997 478999999864       34689999994

>PRK10593 hypothetical protein; Provisional

Probab=98.78  E-value=1.4e-07  Score=91.15  Aligned_cols=69  Identities=17%  Similarity=0.195  Sum_probs=52.2

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ++||.|..+.||+... .+        | .+.+|+.+....                            .-....|..+|
T Consensus        20 ~~i~~G~~~~vy~~~~-~~--------~-~~~~k~~~~~~~----------------------------~~~~~~Ea~~L   61 (297)
T PRK10593         20 ECISEQPYAALWALYD-SQ--------G-NPMPLMARSFST----------------------------PGVAQQEAWKL   61 (297)
T ss_pred             eecCCccceeEEEEEc-CC--------C-CEEEEEeccccc----------------------------chHHHHHHHHH
Confidence            6899999999999976 43        4 588898654100                            01245799999


Q ss_pred             HHhhhCC-CCccccccc-------cceEEEEcccC
Q psy10135        121 TRMYSEG-LNVPKPILL-------KSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~g-i~vP~pi~~-------~~~vLVMEfig  147 (351)
                      +.|...+ ++||+++..       +..+||||+|.
T Consensus        62 ~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~   96 (297)
T PRK10593         62 SMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR   96 (297)
T ss_pred             HHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence            9998874 999999953       44799999995

>KOG0590|consensus

Probab=98.73  E-value=2.5e-08  Score=105.27  Aligned_cols=73  Identities=22%  Similarity=0.126  Sum_probs=60.3

Q ss_pred             EEEcccCcccccccccccC-CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        141 LLMTFIGEDGWPAAKLKDT-PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       141 LVMEfig~~G~~~~~L~~~-~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      -+||||.  +.+...+... .++..++..++.||+.++++|| ..||.||||||+|+|+. .|.++|||||.+.-...
T Consensus       398 ~~mE~~~--~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h-~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  398 QSMEYCP--YDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLH-SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY  472 (601)
T ss_pred             hhhhccc--HHHHHHHhcccccchhhhhHHHHHHHHHHHHHH-hcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence            3499995  4444445544 6888899999999999999999 59999999999999995 57999999999865543

>PRK06148 hypothetical protein; Provisional

Probab=98.73  E-value=1.5e-07  Score=104.85  Aligned_cols=72  Identities=19%  Similarity=0.344  Sum_probs=53.6

Q ss_pred             CCccccCCCCCceEEeCC---eEE-EEEccccccCCCCChHHHHHhhhhhhhhccccC-CCCC-cHHHHHHhhhhcCCCC
Q psy10135        184 CHLVHADLSEYNMLVHKA---TLF-IIDVAQSVEHDHPHALQFLRKDCDNVTVFVILN-PVSD-DDEKIFKKWDSDYVTS  257 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~g---~l~-IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~-~~~~-~~~~~~~~~~~~~~~~  257 (351)
                      .++||+|+++.|||++++   ++. |||||.+.       ..|+-.|++....|+..+ +... ....++.+|....+.+
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~-------~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt  275 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV-------HAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQ  275 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccc-------cccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCC
Confidence            579999999999999654   565 99999994       457788888777665432 2211 2678899999888877


Q ss_pred             ccccc
Q psy10135        258 SDEDE  262 (351)
Q Consensus       258 ~~~~~  262 (351)
                      +++++
T Consensus       276 ~~E~~  280 (1013)
T PRK06148        276 AQELD  280 (1013)
T ss_pred             HHHHH
Confidence            66655

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=98.61  E-value=2.3e-07  Score=88.83  Aligned_cols=77  Identities=19%  Similarity=0.219  Sum_probs=51.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|..|-...||++......  .....++.+++|++......+.                           ....|++++
T Consensus         4 ~~l~gGltN~~y~v~~~~~~--~~~~~~~~~vlRi~~~~~~~~~---------------------------~r~~E~~~~   54 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDED--ALSDEPRKVLLRVYGQSVELLI---------------------------DRERELVVF   54 (302)
T ss_pred             EEecCcccceeEEEEcCCcc--cccCCCCeEEEEEecCCCccee---------------------------chHHHHHHH
Confidence            45677888899998752100  0011147899999876321111                           124689999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ..|...|+ +|+++......+||+|+.
T Consensus        55 ~~l~~~g~-~P~~~~~~~~~~v~e~i~   80 (302)
T cd05156          55 ARLSERNL-GPKLYGIFPNGRIEEFIP   80 (302)
T ss_pred             HHHHhCCC-CCceEEEeCCCchhheeC
Confidence            99999985 799987776778999994

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.56  E-value=3.5e-07  Score=92.09  Aligned_cols=79  Identities=22%  Similarity=0.121  Sum_probs=51.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCC-cEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELE-KEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g-~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      +.||.|-.+.||++.. .+        | +.++||.-.+.....        |+          ++ .+..-....|.+.
T Consensus        32 ~elggGn~N~VyrV~~-~~--------g~~svIVKqa~p~~r~~--------g~----------~w-pl~~eR~~~Eae~   83 (401)
T PRK09550         32 REIGDGNLNLVFRVSD-TE--------GGKSVIVKQALPYVRVV--------GE----------SW-PLTLDRARIEAEA   83 (401)
T ss_pred             eEcCCCceEEEEEEEe-CC--------CCeEEEEEecCcccccc--------cc----------cc-cccHHHHHHHHHH
Confidence            6899999999999998 54        5 589999854311000        00          00 0111123457777


Q ss_pred             HHHhhhC-CCCcccccccc--ceEEEEcccC
Q psy10135        120 LTRMYSE-GLNVPKPILLK--SHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~~~-gi~vP~pi~~~--~~vLVMEfig  147 (351)
                      |..+... ...+|+++...  .+++||||++
T Consensus        84 L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~  114 (401)
T PRK09550         84 LKIQAKYVPDLVPKVYHYDEELAVTVMEDLS  114 (401)
T ss_pred             HHHHHhhCCCCCCeEEEECCCCCEEEEecCC
Confidence            8887543 45799998764  4689999996

>PRK06149 hypothetical protein; Provisional

Probab=98.49  E-value=2.3e-06  Score=95.16  Aligned_cols=73  Identities=12%  Similarity=0.064  Sum_probs=54.3

Q ss_pred             hCCccccCCCCCceEEeCC---e---EEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCC-C-cHHHHHHhhhhcC
Q psy10135        183 KCHLVHADLSEYNMLVHKA---T---LFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS-D-DDEKIFKKWDSDY  254 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~~g---~---l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~-~-~~~~~~~~~~~~~  254 (351)
                      ..|+||+|+++.|||++++   .   .-|||||.+       ...|+-.|++-...++...... + ....+|.+|.+..
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~-------~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svr  279 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDL-------VRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVR  279 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccc-------hhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcC
Confidence            4789999999999999642   3   369999999       6788888997666555332111 1 2678999999988


Q ss_pred             CCCccccc
Q psy10135        255 VTSSDEDE  262 (351)
Q Consensus       255 ~~~~~~~~  262 (351)
                      +.++++++
T Consensus       280 pLt~~E~~  287 (972)
T PRK06149        280 PLSEAELK  287 (972)
T ss_pred             CCCHHHHH
Confidence            87776665

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=98.45  E-value=2.4e-06  Score=81.82  Aligned_cols=59  Identities=20%  Similarity=0.251  Sum_probs=38.4

Q ss_pred             CccccCCCCCceEEeC-CeE-EEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCCcHHHHHHhhhhcC
Q psy10135        185 HLVHADLSEYNMLVHK-ATL-FIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDY  254 (351)
Q Consensus       185 glVH~DLkp~NILi~~-g~l-~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~~~~~~~~~~~~~~  254 (351)
                      .+||+|++|.|||+++ +++ .||||+.|. .+.|.      .|+.....+|.    ....+.+++.|....
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~-iGDPa------~Dla~~~~~~~----~~~~~~~~~~Y~~~~  246 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK-VGDPA------RDFVLHYRIFG----EAGLERLIDAYEAAG  246 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcc-cCCHH------HHHHHHHHhcC----hHHHHHHHHHHHHcC
Confidence            4899999999999976 664 599999884 44442      34443332221    112677777776543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=98.36  E-value=2.9e-06  Score=83.69  Aligned_cols=138  Identities=13%  Similarity=0.196  Sum_probs=82.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|..|-...+|++.....    ....++.|++|++.....      .++.                     -..|+.++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~----~~~~~~~~v~Ri~g~~t~------~~id---------------------R~~E~~~~   90 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTK----EGNLGRKVLVRIYGEGVE------LFFD---------------------RDDEIRTF   90 (344)
T ss_pred             EEcCCcccceeEEEEeCCC----CCCCCCeEEEEEccCCCC------eeec---------------------hHHHHHHH
Confidence            4666788999999864111    000146899999876321      1111                     14699999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccCccccccc------------------ccccCCCC-------HHHHHHHHHH---
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAA------------------KLKDTPLT-------ESGACKLYRE---  172 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~------------------~L~~~~l~-------~~~~~~l~~q---  172 (351)
                      ..|...|+ .|+++.......|++|+.  |.++.                  ++....++       ..++..+..+   
T Consensus        91 ~~l~~~gl-~P~~~~~~~~g~v~efi~--g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~  167 (344)
T PLN02236         91 ECMSRHGQ-GPRLLGRFPNGRVEEFIH--ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKN  167 (344)
T ss_pred             HHHHHcCC-CCceEEEECCceEEEeeC--CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHh
Confidence            99999998 788887665668999994  43321                  11111111       0112121111   


Q ss_pred             -----------------HHHHHHHHHh----hCCccccCCCCCceEEeC--CeEEEEEccccc
Q psy10135        173 -----------------CVVMMWRLYN----KCHLVHADLSEYNMLVHK--ATLFIIDVAQSV  212 (351)
Q Consensus       173 -----------------ll~~L~~LH~----~~glVH~DLkp~NILi~~--g~l~IIDFG~Av  212 (351)
                                       .+..|.....    ...++|+||++.|||+.+  +.++||||..|.
T Consensus       168 l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        168 LCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             hcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence                             1111111111    236899999999999964  579999999884

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=98.28  E-value=1.2e-06  Score=87.15  Aligned_cols=78  Identities=21%  Similarity=0.221  Sum_probs=48.8

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .||-|--+-||++.+ ..       .++.++||.-.+-....        |+         .-|  +..-.+..|...|+
T Consensus         2 EigdGnlN~VfrV~~-~~-------g~~svIVKQAlp~vRv~--------g~---------~wp--l~~~R~~~E~~~L~   54 (370)
T TIGR01767         2 EVGDGNLNLVFHVYD-QE-------GDRAAIVKQALPYVRVV--------GE---------SWP--LTLDRARIESSALI   54 (370)
T ss_pred             cCCCCceEEEEEEEc-CC-------CCeeEEEEEcCHHHhhc--------CC---------CCC--CCccHHHHHHHHHH
Confidence            478999999999987 43       03689999754411110        00         001  11122346788887


Q ss_pred             HhhhCCC--Cccccccc--cceEEEEcccC
Q psy10135        122 RMYSEGL--NVPKPILL--KSHVLLMTFIG  147 (351)
Q Consensus       122 rL~~~gi--~vP~pi~~--~~~vLVMEfig  147 (351)
                      .+... .  .+|+++..  ..+++|||+++
T Consensus        55 ~~~~~-~P~~vP~vy~~D~e~~~~vMEdL~   83 (370)
T TIGR01767        55 RQGEH-VPHLVPRIFHFDTEMAVTVMEDLS   83 (370)
T ss_pred             Hhhcc-CccccCeEEEEccccceehHhhCc
Confidence            76553 3  38888765  45689999996

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=98.27  E-value=2.3e-06  Score=77.99  Aligned_cols=55  Identities=25%  Similarity=0.340  Sum_probs=37.8

Q ss_pred             CcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccC
Q psy10135         68 EKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus        68 g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ++.|++||+......+-+                           -+.|..+++.|...|+ .|.++......+|.+|+ 
T Consensus         2 ~~~~~~Ri~g~~t~~~id---------------------------r~~E~~~~~~l~~~g~-~p~~~~~~~~g~v~e~i-   52 (211)
T PF01633_consen    2 PEKYLVRIPGEGTENFID---------------------------RENENEALKLLSEAGL-GPKIIYFFENGRVEEFI-   52 (211)
T ss_dssp             TSEEEEEEEESCGCSHHH---------------------------HHHHHHHHHHHHHTTS-SS-EEEEETTEEEEE---
T ss_pred             CCEEEEEeCCCCcccccC---------------------------HHHHHHHHHHHHHcCC-CCeEEEEcCCCcEEEEe-
Confidence            568999999875322221                           2468899999999886 68888877778999999 


Q ss_pred             ccccc
Q psy10135        148 EDGWP  152 (351)
Q Consensus       148 ~~G~~  152 (351)
                       +|.+
T Consensus        53 -~g~~   56 (211)
T PF01633_consen   53 -EGRT   56 (211)
T ss_dssp             -SSEE
T ss_pred             -cccc
Confidence             4544

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=98.17  E-value=2.5e-05  Score=75.51  Aligned_cols=72  Identities=17%  Similarity=0.153  Sum_probs=47.7

Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccCCCCChHHHHHhhhhhhhh-ccc-cCCCCCcHHHHHHhhhhcCCCCccc
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTV-FVI-LNPVSDDDEKIFKKWDSDYVTSSDE  260 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~-ff~-~~~~~~~~~~~~~~~~~~~~~~~~~  260 (351)
                      .||||+|+.+.|+|++ ++.+.||||..|. .++|      .+|+.+... -+. ....+.....+|+.|.+..+..+++
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~-~d~~------~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E  268 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKAS-FASP------LTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEE  268 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhcc-cCCc------HHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHH
Confidence            4799999999999995 4689999999884 3333      334432211 111 1223333689999999988876665


Q ss_pred             cc
Q psy10135        261 DE  262 (351)
Q Consensus       261 ~~  262 (351)
                      ..
T Consensus       269 ~~  270 (309)
T TIGR02904       269 IH  270 (309)
T ss_pred             HH
Confidence            54

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK12396 5-methylribose kinase; Reviewed

Probab=98.13  E-value=3.2e-06  Score=85.10  Aligned_cols=80  Identities=15%  Similarity=0.058  Sum_probs=51.1

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...||-|--+-||++.+...        ++.++||.-.+-..        + |          .+ ..+..-.+..|...
T Consensus        34 ~~eigdGnlN~VfrV~~~~~--------~~svIVKQAlp~vR--------v-~----------~s-wpL~~~R~~~E~~a   85 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQK--------NISVIVKQAGDTAR--------I-S----------DE-FKLSTNRIRIESDV   85 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCC--------CceEEEEeccHhhc--------c-C----------CC-CCCChHHHHHHHHH
Confidence            46889999999999987222        56799996543110        0 0          01 01222334568888


Q ss_pred             HHHhhhCC-CCccccccc--cceEEEEcccC
Q psy10135        120 LTRMYSEG-LNVPKPILL--KSHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~~~g-i~vP~pi~~--~~~vLVMEfig  147 (351)
                      |+.+...- -.+|+++..  ..+++|||+++
T Consensus        86 L~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~  116 (409)
T PRK12396         86 LQLEEELAPGLVPKVYLFDSVMNCCVMEDLS  116 (409)
T ss_pred             HHHHHhhCCCcCCeEEEECcHHhhHHHHhCc
Confidence            88775531 148888865  45689999996

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=98.11  E-value=2.6e-05  Score=76.42  Aligned_cols=74  Identities=16%  Similarity=0.246  Sum_probs=49.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|..|=...+|+......     .+.+..|++|++.....      ..+.                     -..|+.++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~-----~~~~~~~v~Ri~g~~t~------~~Id---------------------R~~E~~il   67 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEE-----NGNEVSVTVRLFGPNTD------YVID---------------------RERELQAI   67 (330)
T ss_pred             EEeCCcccceEEEEEecCC-----CCCCceEEEEEecCCcC------eEec---------------------hHHHHHHH
Confidence            5666688888999865211     00134899999865321      1111                     14689999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      +.|...|+. |+++......+|.+|+.
T Consensus        68 ~~l~~~gl~-P~~l~~~~~G~i~~fi~   93 (330)
T PLN02421         68 KYLSAAGFG-AKLLGVFGNGMIQSFIN   93 (330)
T ss_pred             HHHHhcCCC-CceeEEeCCcEeehhhc
Confidence            999999974 78776555567999993

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=98.10  E-value=6.7e-05  Score=73.59  Aligned_cols=98  Identities=17%  Similarity=0.244  Sum_probs=67.7

Q ss_pred             HHHHHHHHHhhhCCCCccccccc------cceEEEEcccCccccccc-ccccCCCCHHHHHHHH-HHHHHHHHHHH----
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAA-KLKDTPLTESGACKLY-RECVVMMWRLY----  181 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~-~L~~~~l~~~~~~~l~-~qll~~L~~LH----  181 (351)
                      .+|++.|..+....+++|.++..      +..+.||+|+  .|..+. .+......    .++. ..++..|..||    
T Consensus        69 ~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~v--eGe~~~~~~~~~~~~----~~~~~~~l~~~La~LH~ida  142 (321)
T COG3173          69 KREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWV--EGEVVWSALPPESLG----RQFALDALADFLAELHSIDA  142 (321)
T ss_pred             HhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEe--cceeccCcCCcccch----HHHHHHHHHHHHHHHhCCCC
Confidence            46999999999888888888754      3458999999  563221 11111111    2222 36777777777    


Q ss_pred             -----------------------------------------------------hhCCccccCCCCCceEEeCC-eEEEEE
Q psy10135        182 -----------------------------------------------------NKCHLVHADLSEYNMLVHKA-TLFIID  207 (351)
Q Consensus       182 -----------------------------------------------------~~~glVH~DLkp~NILi~~g-~l~IID  207 (351)
                                                                           ..-.+||+|+++.|||++++ .+-|||
T Consensus       143 ~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlD  222 (321)
T COG3173         143 AGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLD  222 (321)
T ss_pred             cCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEe
Confidence                                                                 23469999999999999764 577999


Q ss_pred             ccccccCCCCC
Q psy10135        208 VAQSVEHDHPH  218 (351)
Q Consensus       208 FG~Av~~~~p~  218 (351)
                      |+.+. +++|.
T Consensus       223 we~~~-lGDP~  232 (321)
T COG3173         223 WELAT-LGDPL  232 (321)
T ss_pred             ccccc-cCCcH
Confidence            99984 56664

>KOG1240|consensus

Probab=98.10  E-value=1.4e-06  Score=95.34  Aligned_cols=149  Identities=16%  Similarity=0.201  Sum_probs=92.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +...+.||++.|=.|.+|.+ ..        |. |+||++-....... ...|.                  -++   .|
T Consensus        25 ~~~~~~LGstRFlKv~r~k~-~e--------G~-vVvKVFvk~~p~~s-L~~~~------------------qrL---~~   72 (1431)
T KOG1240|consen   25 CHYVENLGSTRFLKVARAKD-RE--------GL-VVVKVFVKQDPTIS-LRPFK------------------QRL---EE   72 (1431)
T ss_pred             eeeecccCchhhhhhhhccC-CC--------ce-EEEEEEeccCCCCC-chHHH------------------HHH---HH
Confidence            56678999999999999998 33        64 99999854221100 00011                  011   12


Q ss_pred             HHHHHHhhhC-C-CCccccccc-cceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSE-G-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~-g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      .+  ..|..+ + ++.-+.+.. +..|||=+|+  .-.+..+|.--+ |..-+-+-++-||+.++..+| +.||+|||||
T Consensus        73 ik--~~l~~~pn~lPfqk~~~t~kAAylvRqyv--khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH-~~gVcHGDIK  147 (1431)
T KOG1240|consen   73 IK--FALMKAPNCLPFQKVLVTDKAAYLVRQYV--KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCH-KLGVCHGDIK  147 (1431)
T ss_pred             HH--HHhhcCCcccchHHHHHhhHHHHHHHHHH--hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHH-HcCccccccc
Confidence            22  122211 1 111111111 3446788888  344455554433 444556678899999999999 6999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc----CCCCChHHH
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE----HDHPHALQF  222 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~----~~~p~a~~f  222 (351)
                      .+|||+. -+=++|.||..=..    .|+|.-+.|
T Consensus       148 sENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~f  182 (1431)
T KOG1240|consen  148 SENILITSWNWLYLTDFASFKPTYLPEDNPADFTF  182 (1431)
T ss_pred             cceEEEeeechhhhhcccccCCccCCCCCcccceE
Confidence            9999995 47799999975532    255554433

>KOG4158|consensus

Probab=98.10  E-value=4.5e-06  Score=83.24  Aligned_cols=72  Identities=17%  Similarity=0.121  Sum_probs=52.2

Q ss_pred             ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE--eC-C--eEEEEEccccc
Q psy10135        138 SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV--HK-A--TLFIIDVAQSV  212 (351)
Q Consensus       138 ~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi--~~-g--~l~IIDFG~Av  212 (351)
                      ..+|||--..  -..-..|-....+....+-+..|+++++.+|| ++|+.|||||..|||+  ++ +  .++|.|||+|.
T Consensus       317 tlylvMkrY~--~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~-~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  317 TLYLVMKRYR--QTLREYLWTRHRSYRTGRVILAQLLEAVTHLH-KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             eEEEehhcch--hhHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-HccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            3478887652  11111111123455566788999999999999 5999999999999999  23 2  68999999985

>KOG0603|consensus

Probab=98.08  E-value=7.1e-07  Score=92.64  Aligned_cols=142  Identities=17%  Similarity=0.176  Sum_probs=92.2

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .+|+|.+|.|+++....   +  ...|.-||+|+.+......+.+..+.                        .|...+.
T Consensus         1 vlg~g~~gkvfLvrk~~---g--~da~~~yamkvl~k~t~~~~~~~~t~------------------------~er~il~   51 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAG---G--ADAGHLYAMKVLKKATLKVRDRTHTK------------------------QERIILA   51 (612)
T ss_pred             CCCcCCCcchHHHHHhc---c--ccccchhhhhcccccccccccccccc------------------------cHHHHHh
Confidence            37999999999875411   0  11277899999887544333322111                        1222222


Q ss_pred             HhhhC--CCCcccccc-ccceEEEEcccCcccccccccccCC-CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        122 RMYSE--GLNVPKPIL-LKSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       122 rL~~~--gi~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~~-l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      .....  .+.....+. ....+++++|+. +|....++.... +.....+.+..+++-++..+| +.|++|+|+|++||+
T Consensus        52 ~~~~~~f~v~lhyafqt~~kl~l~ld~~r-gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh-~l~iiyrd~k~enil  129 (612)
T KOG0603|consen   52 FVHNTPFLVKLHYAFQTDGKLYLILDFLR-GGDLFTRLSKEVMFDELDVAFYLAELALALDHLH-KLGIAYRDYKLENVL  129 (612)
T ss_pred             hccCCCceeeeeeeeccccchhHhhhhcc-cchhhhccccCCchHHHHHHHHHHHHHHHHhhcc-hhHHHHhccccccee
Confidence            22211  111111111 134468999996 566667776644 445556677788999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEccccccC
Q psy10135        198 VH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~~  214 (351)
                      +. +|++++.|||.+++.
T Consensus       130 ld~~Ghi~~tdfglske~  147 (612)
T KOG0603|consen  130 LLLEGHIKLTDFGLSKEA  147 (612)
T ss_pred             ecccCccccCCchhhhHh
Confidence            95 688999999999764

>PLN02756 S-methyl-5-thioribose kinase

Probab=98.07  E-value=1.7e-05  Score=80.15  Aligned_cols=79  Identities=19%  Similarity=0.148  Sum_probs=50.2

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      .+.||.|--+.||+..+ .         +..++||.-.+.........                 |  +.......|...
T Consensus        37 ~~eiggGn~N~VyrV~~-~---------~~svVVKqa~p~~r~vga~w-----------------p--l~~~R~~~Ea~a   87 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVS-S---------SGSFVIKQALPYIRCIGESW-----------------P--MTKERAYFEATA   87 (418)
T ss_pred             EEEcCCCceeeEEEEEc-C---------CccEEEEeCCccccCCCccc-----------------c--CCccHHHHHHHH
Confidence            46789999999999886 3         45799997654321111000                 0  001112346777


Q ss_pred             HHHhhhC-CCCcccccccc--ceEEEEcccC
Q psy10135        120 LTRMYSE-GLNVPKPILLK--SHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~~~-gi~vP~pi~~~--~~vLVMEfig  147 (351)
                      |..+... .++||+++...  .++|+|||+.
T Consensus        88 L~~~~~~~p~~VPkVy~~ded~~vlvME~L~  118 (418)
T PLN02756         88 LREHGRLCPDHVPEVYHFDRTMALIGMRYLE  118 (418)
T ss_pred             HHHhhhcCCCCCCeEEEECCCCCEEEEeecC
Confidence            7776542 26899998775  4799999994

>KOG0606|consensus

Probab=97.94  E-value=5.4e-06  Score=90.52  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=35.2

Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      +.++.++| ..||||||+||.|+||. -|++++.|||++..
T Consensus       153 vla~Eylh-~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~  192 (1205)
T KOG0606|consen  153 VLAVEYLH-SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKK  192 (1205)
T ss_pred             hHHhHhhc-cCCeecCCCCCCcceeeecccccccchhhhhh
Confidence            77899999 59999999999999995 59999999998853

>KOG1236|consensus

Probab=97.92  E-value=3e-05  Score=78.07  Aligned_cols=161  Identities=22%  Similarity=0.196  Sum_probs=89.0

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCccccc-------ccCCcEEEEEEeeCCchhhhhcc-ccccccccccccccCCCh--
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIEN-------LELEKEFAIKIFKTSILVFKDRD-KYVNGEFRFRHGYCKKNP--  105 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~-------~~~g~~vAIKi~k~s~~~fk~~~-~yv~ge~Rfr~~~~k~n~--  105 (351)
                      .+++ ..||+|.-|+||+|+....+-+.+       -...+.||||+..+.....-.++ .++.--.+..+-...-++  
T Consensus       190 ~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~  269 (565)
T KOG1236|consen  190 SEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLS  269 (565)
T ss_pred             HhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCcccccc
Confidence            3444 689999999999997522111111       12346799999987531111000 011000000000000000  


Q ss_pred             ----------hHHHHHHHHHHHHHHHHhhhC-----CCCccccccc--cceEEEEcccCcccccccc-cccCCCCHHHHH
Q psy10135        106 ----------RKMVRTWAEKEMRNLTRMYSE-----GLNVPKPILL--KSHVLLMTFIGEDGWPAAK-LKDTPLTESGAC  167 (351)
Q Consensus       106 ----------r~~vk~~aekE~~nL~rL~~~-----gi~vP~pi~~--~~~vLVMEfig~~G~~~~~-L~~~~l~~~~~~  167 (351)
                                .-..++....|.-+|.+....     .+..|.|+..  ...+|+-+|.  .|....+ ++....+++-.+
T Consensus       270 l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~--~Gl~v~~~v~~~~~pe~l~k  347 (565)
T KOG1236|consen  270 LPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYE--RGLSVLRFVKWKSQPEALVK  347 (565)
T ss_pred             CcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeecc--ccccHHhhhhcccChHHHHH
Confidence                      001233445677777776432     2567888865  4557777777  5654433 333344443445


Q ss_pred             HHHHHHHHHHHHHHhhCCccccCCCCCceEEe
Q psy10135        168 KLYRECVVMMWRLYNKCHLVHADLSEYNMLVH  199 (351)
Q Consensus       168 ~l~~qll~~L~~LH~~~glVH~DLkp~NILi~  199 (351)
                      .+..-...++-.|.--.++||+||+|.||++.
T Consensus       348 kva~lg~~AllkMl~vDNFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  348 KVAKLGVNALLKMLIVDNFVHADLHPGNVLIR  379 (565)
T ss_pred             HHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence            56666677777777667899999999999993

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.90  E-value=6.9e-05  Score=72.47  Aligned_cols=82  Identities=18%  Similarity=0.241  Sum_probs=48.5

Q ss_pred             HHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChh
Q psy10135         27 LFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPR  106 (351)
Q Consensus        27 L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r  106 (351)
                      |...+..+..-+-...|+.|..+.+|+...  +        ++.+-||+-.....                         
T Consensus         9 ~~~~~~~~~~i~~~~~v~GG~i~~a~~~~~--~--------~~~~FvK~~~~~~~-------------------------   53 (288)
T PF03881_consen    9 ISEQLGADFKITSIEPVSGGDINEAYRLDT--D--------GGSYFVKVNSESGR-------------------------   53 (288)
T ss_dssp             HHHHHTS-----EEEEE--SSSSEEEEEET--T--------S-EEEEEEEEGGGC-------------------------
T ss_pred             HHHHhCCCCceeeeEecCCCChhheEEEEC--C--------CccEEEEecChhhH-------------------------
Confidence            344444443223336788899999999874  4        78999998653110                         


Q ss_pred             HHHHHHHHHHHHHHHHhhh-CCCCccccccc----cceEEEEcccC
Q psy10135        107 KMVRTWAEKEMRNLTRMYS-EGLNVPKPILL----KSHVLLMTFIG  147 (351)
Q Consensus       107 ~~vk~~aekE~~nL~rL~~-~gi~vP~pi~~----~~~vLVMEfig  147 (351)
                          ...+.|+..|+.|.. ..+.||+|+..    ...+|||||+.
T Consensus        54 ----~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   54 ----DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             ----CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             ----HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence                113568999999954 55899999975    35689999996

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00384 choline kinase; Provisional

Probab=97.81  E-value=0.00019  Score=72.09  Aligned_cols=33  Identities=9%  Similarity=0.054  Sum_probs=28.2

Q ss_pred             HHHHHHHHHhhhCCCCccccccccceEEEEcccC
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ++|+++++.|...|+ .|+++....+.+|.|||.
T Consensus       100 ~~E~~i~~~Ls~~gl-gP~l~~~f~~g~l~efIe  132 (383)
T PTZ00384        100 DLQYNIAKLLGDNNF-GPKIIGRFGDFTIQEWVE  132 (383)
T ss_pred             HHHHHHHHHHHhCCC-CCeEEEecCCEEEEEEec
Confidence            468999999998875 688888888899999994

>PTZ00296 choline kinase; Provisional

Probab=97.79  E-value=0.00018  Score=73.51  Aligned_cols=79  Identities=10%  Similarity=0.110  Sum_probs=52.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      .+|..|-...+|++......+......++.|+++++-.....+-+                           -..|..++
T Consensus       111 ~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lId---------------------------R~~E~~v~  163 (442)
T PTZ00296        111 NQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYN---------------------------PISEFEVY  163 (442)
T ss_pred             EEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeC---------------------------HHHHHHHH
Confidence            678888889999997521100000011468999998654321111                           13588999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ..|...|+ .|+++.....+.|.+|+.
T Consensus       164 ~~ls~~gi-~P~l~~~f~gg~I~efi~  189 (442)
T PTZ00296        164 KTMSKYRI-APQLLNTFSGGRIEEWLY  189 (442)
T ss_pred             HHHHHCCC-CCceEEEeCCCEEEEeeC
Confidence            99999987 688887777889999994

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.78  E-value=0.00014  Score=66.67  Aligned_cols=145  Identities=23%  Similarity=0.326  Sum_probs=86.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      .+||+|++=.||.-   +.        .....|||.++..  ...+...    .+|...+.    +.-......+|+...
T Consensus         7 ~~i~~G~~R~cy~H---P~--------dp~~cIKV~~~~~--~~~~~~~----~~~~k~~~----~~~~~~~~~~E~~~y   65 (199)
T PF10707_consen    7 DLIAQGGERDCYQH---PD--------DPNLCIKVMRPDR--GERRRPF----KRWLKRLR----PKSRYRQNRRELRYY   65 (199)
T ss_pred             cccccCCCceEEEC---CC--------CCCeEEEEEcccc--ccccccc----hhHHHhhc----ccchhHHHHHHHHHH
Confidence            58999999999974   44        5568999998754  1111100    01111000    011122344566666


Q ss_pred             HHhh-hCC---CCccccccc----cceEEEEcccC-ccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        121 TRMY-SEG---LNVPKPILL----KSHVLLMTFIG-EDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       121 ~rL~-~~g---i~vP~pi~~----~~~vLVMEfig-~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      .++. ..+   .++|..+..    ...-+|+|.|. .+|.+++.|.+    ..++.    .+...+-+...+|. ..+||
T Consensus        66 ~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~----~~~~~L~~f~~~l~-~~~Iv  140 (199)
T PF10707_consen   66 KQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE----ELRQALDEFKRYLL-DHHIV  140 (199)
T ss_pred             HHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH----HHHHHHHHHHHHHH-HcCCe
Confidence            6666 444   245555543    23358999995 47877777754    23443    33334444455666 58899


Q ss_pred             ccCCCCCceEEe---C-C-eEEEEEc-ccc
Q psy10135        188 HADLSEYNMLVH---K-A-TLFIIDV-AQS  211 (351)
Q Consensus       188 H~DLkp~NILi~---~-g-~l~IIDF-G~A  211 (351)
                      .+||+|.||++.   + . +++|||- |..
T Consensus       141 ~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  141 IRDLNPHNIVVQRRDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             ecCCCcccEEEEecCCCceEEEEEeCCCCc
Confidence            999999999994   2 2 6999994 543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1024|consensus

Probab=97.57  E-value=2.8e-05  Score=77.47  Aligned_cols=53  Identities=17%  Similarity=0.198  Sum_probs=46.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeC-CeEEEEEccccccC
Q psy10135        161 LTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       161 l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~-g~l~IIDFG~Av~~  214 (351)
                      ++.-++..++.|+..+|.++| ++|+||.||-..|-+|++ -+++|+|=.+|+.+
T Consensus       393 vtt~qlV~masQla~am~hlh-~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDL  446 (563)
T KOG1024|consen  393 VTTIQLVLMASQLAMAMEHLH-NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDL  446 (563)
T ss_pred             hhHHHHHHHHHHHHHHHHHHH-hcCcccchhhhhcceehhheeEEeccchhcccc
Confidence            455677889999999999999 699999999999999976 68999999888654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.36  E-value=0.0023  Score=59.08  Aligned_cols=141  Identities=18%  Similarity=0.195  Sum_probs=79.1

Q ss_pred             ceeeecceeeecCc-eEEEEEEeCCCcccccccCCcEEEEEEeeC---CchhhhhccccccccccccccccCCChhHHHH
Q psy10135         35 MVSEVNGCISTGKE-ANVYHASPGANYKIENLELEKEFAIKIFKT---SILVFKDRDKYVNGEFRFRHGYCKKNPRKMVR  110 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~-a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~---s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk  110 (351)
                      --.+..+.||.|.. |.||++.- .         |+.||||+++.   ....+. ...+...+..+..      + ..--
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~---------g~~YALKlf~~~~~~~~~~~-~~~~~~~~~~~~~------~-~~y~   98 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-D---------GRIYALKLFRFWDYTEPDYT-RERFAGHETSLST------P-AHYA   98 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-C---------CeEEEEEEeeccccCCCccc-cccccccccccch------h-hhhc
Confidence            34678899999999 99999987 3         88999999442   111110 0000000000000      0 0000


Q ss_pred             HHHHHHHHHHHHhhhCCC---Ccccccc---c-------------------cceEEEEcccCcccccccccccCCCCHHH
Q psy10135        111 TWAEKEMRNLTRMYSEGL---NVPKPIL---L-------------------KSHVLLMTFIGEDGWPAAKLKDTPLTESG  165 (351)
Q Consensus       111 ~~aekE~~nL~rL~~~gi---~vP~pi~---~-------------------~~~vLVMEfig~~G~~~~~L~~~~l~~~~  165 (351)
                      .-...|.|.--||.+.|-   -..+.+.   +                   ....||.||+.  ...       .++.  
T Consensus        99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~--~~~-------~~~~--  167 (207)
T PF13095_consen   99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVP--DDP-------PLQI--  167 (207)
T ss_pred             ChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecC--Ccc-------ccch--
Confidence            113456777777765541   0111110   0                   01236666663  110       2222  


Q ss_pred             HHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEcccc
Q psy10135        166 ACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQS  211 (351)
Q Consensus       166 ~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~A  211 (351)
                        .-+.+|+.-|..+| ++||+=+|+++.|.+    .-+|+|||.+
T Consensus       168 --~~~~~~~~dl~~~~-k~gI~~~Dv~~~ny~----~G~lvDfs~~  206 (207)
T PF13095_consen  168 --RDIPQMLRDLKILH-KLGIVPRDVKPRNYR----GGKLVDFSSS  206 (207)
T ss_pred             --hHHHHHHHHHHHHH-HCCeeeccCcccccc----CCEEEecccC
Confidence              33566777888898 699999999999987    4568999975

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=97.18  E-value=0.0017  Score=66.00  Aligned_cols=98  Identities=17%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             eecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhcccccc--ccccccccccCCC-h---hHHHHHHHHHHH
Q psy10135         44 STGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVN--GEFRFRHGYCKKN-P---RKMVRTWAEKEM  117 (351)
Q Consensus        44 g~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~--ge~Rfr~~~~k~n-~---r~~vk~~aekE~  117 (351)
                      |.|=.|.|+++...-....+....-+.|||||-....  +...-+-+.  |...+..    .. +   ....+....+|.
T Consensus        44 g~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~--~~~~~~~~~~~~~~~~~~----e~~~~~~~~~l~~~HNrEv  117 (414)
T PF07914_consen   44 GKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLA--LRALSENMKFEGGKGFDE----EKEWEEFEKFLREMHNREV  117 (414)
T ss_pred             CcchheeEEEEEeeeccCccccCCCceEEEEeccHhh--HHHHHHhhccccccccch----hhHHHHHHHHHHHhhHHHH
Confidence            4677889998874221011222335689999975321  111000000  0001100    00 0   112233334454


Q ss_pred             ---HHHHHhhhCCCCccccccc--------cceEEEEcccC
Q psy10135        118 ---RNLTRMYSEGLNVPKPILL--------KSHVLLMTFIG  147 (351)
Q Consensus       118 ---~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig  147 (351)
                         .++.+....++++|++|..        ...+|+|||++
T Consensus       118 ~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ve  158 (414)
T PF07914_consen  118 NFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVE  158 (414)
T ss_pred             HHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccC
Confidence               3455555568999999864        23689999996

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.17  E-value=0.0016  Score=59.03  Aligned_cols=98  Identities=16%  Similarity=0.138  Sum_probs=73.0

Q ss_pred             HHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccc---ccccc-CCCCHHHHHHHHHHHHHHHHHHHhh--CCcc
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPA---AKLKD-TPLTESGACKLYRECVVMMWRLYNK--CHLV  187 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~---~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~--~glV  187 (351)
                      ..|+-.|+.|.... ++|+.+..-.+++|.|+++ .+.+.   ..+.+ ...+......++.+++..+..+++.  ..+.
T Consensus         7 ~~E~lll~~l~~~~-~~pk~lG~CG~~~v~E~~~-~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    7 NNEPLLLQLLQGSE-PFPKLLGSCGRFYVVEYVG-AGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             ccHHHHHHHcCCCC-CCCCeeeECCCEEEEEeec-CccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            35788888887765 8999999988999999996 33221   01111 1234556778999999999999740  2378


Q ss_pred             ccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      -+|++|.|+-|. ++++++||......
T Consensus        85 lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EeecchHHeEEeCCCcEEEEechhcch
Confidence            899999999995 57999999987753

Proteins in this uncharacterised family are described as transmembrane proteins.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=96.98  E-value=0.0013  Score=57.05  Aligned_cols=47  Identities=17%  Similarity=0.212  Sum_probs=39.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        160 PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       160 ~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ++++.++..++.|++.+|.+||+ .|      ||.|||+. ++.+++  ||.+....
T Consensus        13 ~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~~~~~--fG~~~~~~   60 (176)
T smart00750       13 PLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDGLLKL--DGSVAFKT   60 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCccceee--ccceEeec
Confidence            58889999999999999999995 66      99999995 466777  99987543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=96.91  E-value=0.0014  Score=62.40  Aligned_cols=32  Identities=16%  Similarity=0.151  Sum_probs=27.5

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCC
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTS   79 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s   79 (351)
                      +.+.+..|..|.|+.++. .+        |.++++|+..+.
T Consensus         6 ~~~~~~~g~~s~V~pv~~-~d--------G~~avLKl~~p~   37 (253)
T PF04655_consen    6 PDGPPAHGSSSLVVPVRR-AD--------GTPAVLKLAPPH   37 (253)
T ss_pred             cCCCCCCCcceEEEEEEc-CC--------CCeEEEEecCCc
Confidence            457788899999999987 67        999999998863

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.86  E-value=0.0046  Score=58.41  Aligned_cols=68  Identities=16%  Similarity=0.252  Sum_probs=48.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..++.|-...-|+..+ .         ..++-+|+-...                            + ......|...|
T Consensus        22 ~~v~gG~inea~~v~d-g---------~~~~FvK~n~~~----------------------------~-~~~f~AEa~gL   62 (286)
T COG3001          22 EEVSGGDINEAWRLRD-G---------TDPFFVKCNQRE----------------------------Q-LSMFTAEADGL   62 (286)
T ss_pred             cccCCccccceeEeec-C---------CcceEEEecchh----------------------------h-HHHHHHHHHHH
Confidence            5667777777777766 2         457888863221                            1 11235688899


Q ss_pred             HHhhhCC-CCccccccc----cceEEEEcccC
Q psy10135        121 TRMYSEG-LNVPKPILL----KSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~g-i~vP~pi~~----~~~vLVMEfig  147 (351)
                      .-|..++ |.||++|..    ...+|||||+.
T Consensus        63 ~~la~s~ti~VP~vi~~G~~~~~sylVle~L~   94 (286)
T COG3001          63 ELLARSNTITVPKVIAVGASRDHSYLVLEYLP   94 (286)
T ss_pred             HHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence            9998888 999999976    34589999996

>KOG0601|consensus

Probab=96.84  E-value=0.0007  Score=70.20  Aligned_cols=146  Identities=16%  Similarity=0.099  Sum_probs=91.4

Q ss_pred             eeecceeeecCceEEEEEEeC-CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPG-ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~-~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +.....||.|.|+.||.+.-+ .+        +..|++|-.......+.++.. -.|               ++.+    
T Consensus       267 f~~v~~i~~~~~~~~~~~~~r~~~--------~~~Y~~ke~~~~l~~~~~di~-sl~---------------ev~l----  318 (524)
T KOG0601|consen  267 FGLVSKISDGNFSSVFKVSKRPEG--------DCIYAAKELLNGLATFASDIF-SLG---------------EVIL----  318 (524)
T ss_pred             cceeEEccCCccccceeeeecCCC--------CceEeChhhhccccchHhhhc-chh---------------hhhH----
Confidence            345678999999999998753 33        778999988776555544221 111               1111    


Q ss_pred             HHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      |......++..| ..+........+|--|||.+....+..+....+.+...+.+..|++.++..+| ...++|.|++|.|
T Consensus       319 ~~~l~~~~~~~g-~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~-s~~~~~~d~~psn  396 (524)
T KOG0601|consen  319 EAILGSHLPSVG-KNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH-SKLFVHLDVKPSN  396 (524)
T ss_pred             hhHhhcccccCC-CCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc-chhhhcccccccc
Confidence            112222222222 01112223445688899942222222211123556677889999999999999 5899999999999


Q ss_pred             eEEeC--CeEEEEEccccc
Q psy10135        196 MLVHK--ATLFIIDVAQSV  212 (351)
Q Consensus       196 ILi~~--g~l~IIDFG~Av  212 (351)
                      |++.+  +-..+-|||.++
T Consensus       397 i~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  397 ILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             eeeccchhhhhcccccccc
Confidence            99954  667788898885

>KOG0590|consensus

Probab=96.64  E-value=0.00048  Score=73.06  Aligned_cols=151  Identities=17%  Similarity=0.146  Sum_probs=91.8

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      ...|.+.+.||+|+++.|-.+....+       +...+|.|.+......+.    +.      .+              .
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~-------~~~~~a~~~~s~~~~~~~----~~------~~--------------i   67 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRD-------PESSSATKPISIPPKSED----SS------EH--------------I   67 (601)
T ss_pred             cccccccccccccccchhhhhhhcCC-------CcceeeccCCCCCCCccc----hh------hh--------------c
Confidence            34688888999999999988876322       145577776654321000    00      00              0


Q ss_pred             HHHHHHHHHhh-hCC-CCcccccc-ccceEEEEcccCccccccccc--ccC-CCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        114 EKEMRNLTRMY-SEG-LNVPKPIL-LKSHVLLMTFIGEDGWPAAKL--KDT-PLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       114 ekE~~nL~rL~-~~g-i~vP~pi~-~~~~vLVMEfig~~G~~~~~L--~~~-~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      ..|..+-+.+. +.+ +..+.+.. ....+++++|.. .|......  .+. ..+...+..++.|+..++.++|-.+|+.
T Consensus        68 ~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~-g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~  146 (601)
T KOG0590|consen   68 DTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSD-GGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVT  146 (601)
T ss_pred             CccccccccccccccccccCCccCCCcccccccCccc-ccccccccccCCccCCCCcchhhhhhhhccCccccCcccccc
Confidence            01111111111 111 22222222 234578999962 23322222  122 4556677889999999999999338999


Q ss_pred             ccCCCCCceEEe-CC-eEEEEEccccccCCC
Q psy10135        188 HADLSEYNMLVH-KA-TLFIIDVAQSVEHDH  216 (351)
Q Consensus       188 H~DLkp~NILi~-~g-~l~IIDFG~Av~~~~  216 (351)
                      |+|+||+|.+++ .+ .+++.|||.|.....
T Consensus       147 h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  147 HRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cCCCCCccchhccCCCcccCCCchhhccccc
Confidence            999999999995 46 799999999976655

>KOG0601|consensus

Probab=96.44  E-value=0.0018  Score=67.19  Aligned_cols=148  Identities=14%  Similarity=0.134  Sum_probs=89.7

Q ss_pred             eeecceeee--cCceEEEEEEe--CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         37 SEVNGCIST--GKEANVYHASP--GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        37 y~I~~~Ig~--G~~a~VY~a~~--~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      +.+...+|.  |.++.||.+..  ..+        +..+|+|.-+.-...-++         +++.         +    
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s--------~~~~a~k~s~~p~s~p~~---------~~~k---------~----  165 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSES--------PHKFAVKKSKIPFSPPLD---------SKRK---------L----  165 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccC--------CcccccccccCCCCCccc---------cccc---------c----
Confidence            456678888  99999999987  555        888999974321111111         0100         0    


Q ss_pred             HHHHHHHHHHhh--hCCCC-ccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHH----HHHHHHhhCC
Q psy10135        113 AEKEMRNLTRMY--SEGLN-VPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVV----MMWRLYNKCH  185 (351)
Q Consensus       113 aekE~~nL~rL~--~~gi~-vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~----~L~~LH~~~g  185 (351)
                        +|+.-...+.  ..-+. .|.....+..++-.|++|..-..+......-++...+...+.+...    ++..+| .++
T Consensus       166 --~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h-s~~  242 (524)
T KOG0601|consen  166 --REFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH-SNN  242 (524)
T ss_pred             --chhhcccccCccccccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccC-CCc
Confidence              1111111111  00011 1111122445788888851111111111223667778888888888    999999 599


Q ss_pred             ccccCCCCCceEEe-C-CeEEEEEccccccCCCC
Q psy10135        186 LVHADLSEYNMLVH-K-ATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       186 lVH~DLkp~NILi~-~-g~l~IIDFG~Av~~~~p  217 (351)
                      ++|-|+||.||... + ...+++|||+...+...
T Consensus       243 ~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  243 IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDG  276 (524)
T ss_pred             ccccccchhheecccccceeecCCcceeEEccCC
Confidence            99999999999995 4 67999999998877543

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.44  E-value=0.0082  Score=60.19  Aligned_cols=69  Identities=20%  Similarity=0.292  Sum_probs=54.9

Q ss_pred             eEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccc
Q psy10135        139 HVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSV  212 (351)
Q Consensus       139 ~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av  212 (351)
                      .|++|++-   |.++...+..  .-+++..++++++..+.-+-.+..+=||+|...||||++|++.||||.+|+
T Consensus       301 ~yl~~kdh---gt~is~ik~~--~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId~GnvtLIDfklsR  369 (488)
T COG5072         301 LYLHFKDH---GTPISIIKAD--RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILIDEGNVTLIDFKLSR  369 (488)
T ss_pred             EEEEEecC---Cceeeeeecc--cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeeecCceEEEEeeeee
Confidence            36788875   4454444322  235778899999988888876778999999999999999999999999997

>TIGR02905 spore_yutH spore coat protein YutH

Probab=96.36  E-value=0.041  Score=53.59  Aligned_cols=70  Identities=13%  Similarity=0.035  Sum_probs=47.5

Q ss_pred             CCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhc-c-ccCC-CCCcHHHHHHhhhhcCCCCccc
Q psy10135        184 CHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF-V-ILNP-VSDDDEKIFKKWDSDYVTSSDE  260 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~f-f-~~~~-~~~~~~~~~~~~~~~~~~~~~~  260 (351)
                      .+++|+|+...|+| .++...+|+|. ++ .|||..      |+.+..+= + .+.+ ..+....+|+.|.+..+..+++
T Consensus       189 ~~lCH~d~~~hn~l-~~~~~~~i~~d-~~-~D~~~~------DL~~firk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~e  259 (313)
T TIGR02905       189 GTICHERFGETTWL-ERGGLIKPPTE-WV-YDHPAR------DLAEWIRERYMGEIRQNQRAIASFLQEYEQAAPLTPFS  259 (313)
T ss_pred             CccccCccCccccc-cCCCeEecccc-cc-cccchh------HHHHHHHHHHHHhccccHHHHHHHHHHhhhcCCCCHHH
Confidence            38999999999987 76778888888 44 777754      55444322 2 2111 2234788999998888876665


Q ss_pred             cc
Q psy10135        261 DE  262 (351)
Q Consensus       261 ~~  262 (351)
                      ..
T Consensus       260 ~~  261 (313)
T TIGR02905       260 WR  261 (313)
T ss_pred             HH
Confidence            54

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.

>KOG3021|consensus

Probab=96.26  E-value=0.0086  Score=56.17  Aligned_cols=39  Identities=31%  Similarity=0.420  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHHHHhhhCC-CCccccccc-----cceEEEEcccCc
Q psy10135        110 RTWAEKEMRNLTRMYSEG-LNVPKPILL-----KSHVLLMTFIGE  148 (351)
Q Consensus       110 k~~aekE~~nL~rL~~~g-i~vP~pi~~-----~~~vLVMEfig~  148 (351)
                      +...+-|+.-|..+++.+ |.||+|+..     +..+||||||..
T Consensus        48 ~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~idf   92 (313)
T KOG3021|consen   48 RDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEHIDF   92 (313)
T ss_pred             hHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeehhhc
Confidence            344577899999998876 899999864     456899999963

>KOG1234|consensus

Probab=96.04  E-value=0.0091  Score=57.67  Aligned_cols=159  Identities=18%  Similarity=0.204  Sum_probs=92.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhc----cccccccccccccccCC----ChhHHHHH-
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDR----DKYVNGEFRFRHGYCKK----NPRKMVRT-  111 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~----~~yv~ge~Rfr~~~~k~----n~r~~vk~-  111 (351)
                      +....-+.|.|.+|+. .+        |..||+||..++...-.+.    -.++.   .|-.-..+.    ....+++. 
T Consensus        55 ~P~AaASIGQVHrArl-~~--------g~eVavKiQYPGva~sI~SD~~nl~~lL---n~s~llPkGLFLd~~i~~ArkE  122 (363)
T KOG1234|consen   55 GPFAAASIGQVHRARL-AD--------GPEVAVKIQYPGVARSIDSDANNLSRLL---NFSGLLPKGLFLDVLIEVARKE  122 (363)
T ss_pred             CccccccHHHHHHHHh-cC--------CCeeeeecCCCchhhhccCcHHHHHHHH---hhcccccccccHHHHHHHHHHh
Confidence            5667778899999987 66        9999999987753221111    01110   000000000    00011110 


Q ss_pred             --H---HHHHHHHHHHhh-----hCCCCccccccc--cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHH-HHH
Q psy10135        112 --W---AEKEMRNLTRMY-----SEGLNVPKPILL--KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVV-MMW  178 (351)
Q Consensus       112 --~---aekE~~nL~rL~-----~~gi~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~-~L~  178 (351)
                        |   -++|.....+..     .+++.||.++..  ..++|.||++  .|.++....  .++.+.--.+..+++. .|+
T Consensus       123 L~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~rvlt~el~--~G~pid~~~--~~sQ~~rn~i~~~~l~lcLr  198 (363)
T KOG1234|consen  123 LKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVRVLTLELG--QGLPIDKTA--KLSQETRNYIGYKLLELCLR  198 (363)
T ss_pred             cccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccchhhhhhhh--cCccchhhh--cccHHHHHHHHHHHHHHHHH
Confidence              0   235555555432     356778888853  5678999999  576654332  3333222223333332 355


Q ss_pred             HHHhhCCccccCCCCCceEEe--CCeEEEEEccccccCCC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVH--KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~~~  216 (351)
                      .+. ...+..-|-+-.|+||+  ..++.|+|||.|++.+.
T Consensus       199 Eif-~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~  237 (363)
T KOG1234|consen  199 EIF-EFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGE  237 (363)
T ss_pred             HHH-HHhhhcCCCCHHHhccCCCcceEEEEeccccccccH
Confidence            555 35678899999999995  47899999999987754

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.96  E-value=0.0062  Score=55.48  Aligned_cols=29  Identities=21%  Similarity=0.238  Sum_probs=26.0

Q ss_pred             CccccCCCCCceEEeCCeEEEEEcccccc
Q psy10135        185 HLVHADLSEYNMLVHKATLFIIDVAQSVE  213 (351)
Q Consensus       185 glVH~DLkp~NILi~~g~l~IIDFG~Av~  213 (351)
                      -.+|+|+.|+||++.+++++||||+.|..
T Consensus        78 ~p~H~D~~~~N~~~~~~~~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASGLRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCCEEEEeCCcccC
Confidence            47999999999999887899999999853

>KOG3741|consensus

Probab=95.65  E-value=0.064  Score=55.87  Aligned_cols=134  Identities=12%  Similarity=0.100  Sum_probs=88.6

Q ss_pred             ceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCC-hhHHHHHHHHHHHHHHHHhhhC
Q psy10135         48 EANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKN-PRKMVRTWAEKEMRNLTRMYSE  126 (351)
Q Consensus        48 ~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n-~r~~vk~~aekE~~nL~rL~~~  126 (351)
                      -...|+|+...+        |..|++|.+....               ..    ..| ...++..|-..-+.|+..+++.
T Consensus       289 ~~Ttyk~~s~~D--------G~~YvLkRlhg~r---------------~~----~~nk~t~lve~wkkl~h~NvV~frev  341 (655)
T KOG3741|consen  289 SITTYKATSNVD--------GNAYVLKRLHGDR---------------DQ----STNKDTSLVEAWKKLCHTNVVPFREV  341 (655)
T ss_pred             cceeEeeeeccC--------Cceeeeeeecccc---------------cc----CcccchHHHHHHHHhccCceeehhhh
Confidence            457789988667        9999999773211               00    011 1346777776666666666553


Q ss_pred             CCCccccccccceEEEEcccCccccccccc---------------cc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        127 GLNVPKPILLKSHVLLMTFIGEDGWPAAKL---------------KD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       127 gi~vP~pi~~~~~vLVMEfig~~G~~~~~L---------------~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      -  .-..+.....|||.+|.+..+.+....               .+ ..+++..++.++.||..+|..+| ..|+.=.=
T Consensus       342 f--~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH-ssGLAck~  418 (655)
T KOG3741|consen  342 F--LTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH-SSGLACKT  418 (655)
T ss_pred             h--hhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH-hcCceeec
Confidence            2  123334456789999997433322110               01 12456778899999999999999 59999999


Q ss_pred             CCCCceEEeCC-eEEEEEcccc
Q psy10135        191 LSEYNMLVHKA-TLFIIDVAQS  211 (351)
Q Consensus       191 Lkp~NILi~~g-~l~IIDFG~A  211 (351)
                      |.|.+||+.+. +++|.-.|..
T Consensus       419 L~~~kIlv~G~~RIriS~C~i~  440 (655)
T KOG3741|consen  419 LDLKKILVTGKMRIRISGCGIM  440 (655)
T ss_pred             ccHhHeEeeCcceEEEecccce
Confidence            99999999765 7777655554

>KOG4720|consensus

Probab=95.52  E-value=0.035  Score=54.18  Aligned_cols=42  Identities=19%  Similarity=0.286  Sum_probs=32.1

Q ss_pred             ccccCCCCCceEEeC--CeEEEEEccccccCCCCChHHHHHhhhhh-hhhcc
Q psy10135        186 LVHADLSEYNMLVHK--ATLFIIDVAQSVEHDHPHALQFLRKDCDN-VTVFV  234 (351)
Q Consensus       186 lVH~DLkp~NILi~~--g~l~IIDFG~Av~~~~p~a~~fl~~D~~~-v~~ff  234 (351)
                      ++|.||=..||+|++  |.+.+|||--|       ...|...||.| .+.|-
T Consensus       250 FcHNDLL~~Niiy~~~~~~v~fIDYEYa-------~yNY~afDIgNHFnE~a  294 (391)
T KOG4720|consen  250 FCHNDLLCGNIIYDSEKGSVEFIDYEYA-------GYNYQAFDIGNHFNEYA  294 (391)
T ss_pred             EeecchhhcceeeccccCcEEEEeeccc-------ccchhheehhhhHHhhc
Confidence            569999999999964  89999999877       45566778743 44443

>KOG1033|consensus

Probab=95.31  E-value=0.0036  Score=64.47  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=51.7

Q ss_pred             eEEEEcccCcccccccccccC----CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE-eCCeEEEEEcccccc
Q psy10135        139 HVLLMTFIGEDGWPAAKLKDT----PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVE  213 (351)
Q Consensus       139 ~vLVMEfig~~G~~~~~L~~~----~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~  213 (351)
                      .+|.|++|. .+..-..|...    ..+......++.|+..++.+    .|++|+||||.||.. .+++++|-|||+...
T Consensus       331 lyI~Mn~c~-~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  331 LYIQMNLCE-KETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             hhhhhhhhh-hhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccchhhhhhhhhheee
Confidence            468999995 22221222111    13344567888888888876    699999999999999 457899999999876


Q ss_pred             CCC
Q psy10135        214 HDH  216 (351)
Q Consensus       214 ~~~  216 (351)
                      ..+
T Consensus       406 ~~~  408 (516)
T KOG1033|consen  406 QDK  408 (516)
T ss_pred             ccc
Confidence            543

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=95.23  E-value=0.026  Score=54.12  Aligned_cols=62  Identities=21%  Similarity=0.129  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHHHHHHhh-CCccccCCCCCceEEeC-CeEEEEEccccccCCCCChHHHHHhhhhhhhhcc
Q psy10135        166 ACKLYRECVVMMWRLYNK-CHLVHADLSEYNMLVHK-ATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV  234 (351)
Q Consensus       166 ~~~l~~qll~~L~~LH~~-~glVH~DLkp~NILi~~-g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff  234 (351)
                      ....+..+-..+...+.. +-++|+|+.|+|+|..+ |+++||||--|..-+       -.-|++++..-+
T Consensus       134 ~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D-------~~~DLA~~~~e~  197 (269)
T COG0510         134 LRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLND-------PAFDLAALLSEY  197 (269)
T ss_pred             HHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCCcc-------HHHHHHHHHHHh
Confidence            334455555566666643 45999999999999988 999999998774322       234666666544

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=95.09  E-value=0.069  Score=54.57  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE-eCCeEEEEEcc
Q psy10135        164 SGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVA  209 (351)
Q Consensus       164 ~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi-~~g~l~IIDFG  209 (351)
                      .-+....+.|+.+...+| ..|-+-||+.++|+|+ +++.++|+|=.
T Consensus       117 ~fllrvaRnlA~aFA~lH-~~Gh~vGDVn~~~~lVsd~~~V~LVdsD  162 (637)
T COG4248         117 DFLLRVARNLASAFATLH-EHGHVVGDVNQNSFLVSDDSKVVLVDSD  162 (637)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCcccccCccceeeecCceEEEEccc
Confidence            446778889999999999 5999999999999999 46889999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	351
3re4_A	258	Crystal Structure Of Archaeoglobus Fulgidus Rio1 Ki		8e-37
1zp9_A	258	Crystal Structure Of Full-Legnth A.Fulgidus Rio1 Se		3e-35
4gyg_A	397	Crystal Structure Of The Rio2 Kinase From Chaetomiu		2e-10
4gyi_A	397	Crystal Structure Of The Rio2 Kinase-AdpMG2+-Phosph		1e-09
1tqi_A	282	Crystal Structure Of A. Fulgidus Rio2 Serine Protei		1e-05
1tqp_A	282	Crystal Structure Of A. Fulgidus Rio2 Serine Protei		1e-04

>pdb|3RE4|A Chain A, Crystal Structure Of Archaeoglobus Fulgidus Rio1 Kinase Bound To Toyocamycin. Length = 258

Iteration: 1
 Score =  150 bits (380), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 138/249 (55%), Gaps = 11/249 (4%)
Query: 3   RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
           RIK KD  +R    +V+D RT   L+KL ++G ++ + G ISTGKEANV++A    + K 
Sbjct: 15  RIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKP 74
Query: 63  ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
             +      A+KI++     F   D+Y+ G+ RF     + +P++ V  W EKE RNL R
Sbjct: 75  VAM------AVKIYRIETSEFDKMDEYLYGDERFDM--RRISPKEKVFIWTEKEFRNLER 126
Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRL 180
               G++VP+P     +VLLM FIGED  PA  L +    L E     ++ + V  + RL
Sbjct: 127 AKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRL 186
Query: 181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
           Y +  LVHADLSEYN++ +   ++ ID+ Q+V   HP A  +L +D  N+  F     V 
Sbjct: 187 YQEAELVHADLSEYNIM-YIDKVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSKYGVK 245
Query: 241 DDDEKIFKK 249
            D E++ K+
Sbjct: 246 ADFEEMLKE 254

>pdb|1ZP9|A Chain A, Crystal Structure Of Full-Legnth A.Fulgidus Rio1 Serine Kinase Bound To Atp And Mn2+ Ions. Length = 258

Iteration: 1
 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 132/249 (53%), Gaps = 11/249 (4%)
Query: 3   RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
           RIK KD  +R    +V+D RT   L+KL ++G ++   G ISTGKEANV++A    + K 
Sbjct: 15  RIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAXGGVISTGKEANVFYADGVFDGK- 73
Query: 63  ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
                    A+KI++     F   D+Y+ G+ RF     + +P++ V  W EKE RNL R
Sbjct: 74  -----PVAXAVKIYRIETSEFDKXDEYLYGDERFDX--RRISPKEKVFIWTEKEFRNLER 126
Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRL 180
               G++VP+P     +VLL  FIGED  PA  L +    L E     ++ + V  + RL
Sbjct: 127 AKEAGVSVPQPYTYXKNVLLXEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRL 186
Query: 181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
           Y +  LVHADLSEYN + +   ++ ID  Q+V   HP A  +L +D  N+  F     V 
Sbjct: 187 YQEAELVHADLSEYN-IXYIDKVYFIDXGQAVTLRHPXAESYLERDVRNIIRFFSKYGVK 245
Query: 241 DDDEKIFKK 249
            D E+  K+
Sbjct: 246 ADFEEXLKE 254

>pdb|4GYG|A Chain A, Crystal Structure Of The Rio2 Kinase From Chaetomium Thermophilum Length = 397

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 108 MVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGAC 167
           + R  A KE   +  +Y EG  VP+PI    H ++M+ +  D  P  ++   P   S   
Sbjct: 155 LSRLAAIKEFAFMKALYEEGFPVPEPIAQSRHTIVMSLV--DALPMRQVSSVPDPAS--- 209
Query: 168 KLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKA-----------TLFIIDVAQSVEHDH 216
            LY + + ++ RL  K  L+H D +E+N+L+ +            T  IID  Q V  DH
Sbjct: 210 -LYADLIALILRL-AKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIDFPQMVSMDH 267
Query: 217 PHALQFLRKDCDNVTVF 233
           P+A  +  +D   +  F
Sbjct: 268 PNAEMYFDRDVQCIKRF 284

>pdb|4GYI|A Chain A, Crystal Structure Of The Rio2 Kinase-AdpMG2+-Phosphoaspartate Complex From Chaetomium Thermophilum Length = 397

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 108 MVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGAC 167
           + R  A KE   +  +Y EG  VP+PI    H ++M+ +  D  P  ++   P   S   
Sbjct: 155 LSRLAAIKEFAFMKALYEEGFPVPEPIAQSRHTIVMSLV--DALPMRQVSSVPDPAS--- 209
Query: 168 KLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKA-----------TLFIIDVAQSVEHDH 216
            LY + + ++ RL  K  L+H D +E+N+L+ +            T  II   Q V  DH
Sbjct: 210 -LYADLIALILRL-AKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDH 267
Query: 217 PHALQFLRKDCDNVTVF 233
           P+A  +  +D   +  F
Sbjct: 268 PNAEMYFDRDVQCIKRF 284

>pdb|1TQI|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein Kinase Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 27  LFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD- 85
           L +L+  G V  +   +  GKE+ V++            E   E  +K  K     FK  
Sbjct: 82  LHRLVRSGKVDAIGKLMGEGKESAVFNCYS---------EKFGECVVKFHKVGHTSFKKV 132
Query: 86  RDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTF 145
           ++K   G+  F            +R+ A  E R L ++  +GL VPK    + + +LM  
Sbjct: 133 KEKRDYGDLHF--------SVLAIRS-ARNEFRALQKL--QGLAVPKVYAWEGNAVLMEL 181
Query: 146 IGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH 199
           I        +++      D  L E    K Y   +V            H DLS+YN+LV 
Sbjct: 182 IDAKELYRVRVENPDEVLDMILEE--VAKFYHRGIV------------HGDLSQYNVLVS 227
Query: 200 KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           +  ++IID  QSVE       + L +D  N+  +
Sbjct: 228 EEGIWIIDFPQSVEVGEEGWREILERDVRNIITY 261

>pdb|1TQP|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein Kinase Bound To Atp Length = 282

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 41/214 (19%)
Query: 27  LFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD- 85
           L +L+  G V  +      GKE+ V++            E   E  +K  K     FK  
Sbjct: 82  LHRLVRSGKVDAIGKLXGEGKESAVFNCYS---------EKFGECVVKFHKVGHTSFKKV 132
Query: 86  RDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTF 145
           ++K   G+  F            +R+ A  E R L ++  +GL VPK    + + +L   
Sbjct: 133 KEKRDYGDLHF--------SVLAIRS-ARNEFRALQKL--QGLAVPKVYAWEGNAVLXEL 181
Query: 146 IGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH 199
           I        +++      D  L E    K Y   +V            H DLS+YN+LV 
Sbjct: 182 IDAKELYRVRVENPDEVLDXILEE--VAKFYHRGIV------------HGDLSQYNVLVS 227
Query: 200 KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           +  ++IID  QSVE       + L +D  N+  +
Sbjct: 228 EEGIWIIDFPQSVEVGEEGWREILERDVRNIITY 261

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	351
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	7e-79
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	4e-68

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score =  241 bits (616), Expect = 7e-79
 Identities = 92/249 (36%), Positives = 136/249 (54%), Gaps = 11/249 (4%)

Query: 3   RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
           RIK KD  +R    +V+D RT   L+KL ++G ++ + G ISTGKEANV++A    + K 
Sbjct: 15  RIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGK- 73

Query: 63  ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
                    A+KI++     F   D+Y+ G+ RF     + +P++ V  W EKE RNL R
Sbjct: 74  -----PVAMAVKIYRIETSEFDKMDEYLYGDERFDM--RRISPKEKVFIWTEKEFRNLER 126

Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTP--LTESGACKLYRECVVMMWRL 180
               G++VP+P     +VLLM FIGED  PA  L +    L E     ++ + V  + RL
Sbjct: 127 AKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRL 186

Query: 181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
           Y +  LVHADLSEYN++     ++ ID+ Q+V   HP A  +L +D  N+  F     V 
Sbjct: 187 YQEAELVHADLSEYNIMYID-KVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSKYGVK 245

Query: 241 DDDEKIFKK 249
            D E++ K+
Sbjct: 246 ADFEEMLKE 254

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* Length = 282

 Score =  214 bits (546), Expect = 4e-68
 Identities = 50/232 (21%), Positives = 91/232 (39%), Gaps = 29/232 (12%)

Query: 3   RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
           R+    + D   +       +   L +L+  G V  +   +  GKE+ V++         
Sbjct: 58  RVVQNRQKDYEGSTFTFIGLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEK---- 113

Query: 63  ENLELEKEFAIKIFKTSILVF-KDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
                  E  +K  K     F K ++K   G+  F           +    A  E R L 
Sbjct: 114 -----FGECVVKFHKVGHTSFKKVKEKRDYGDLHFS---------VLAIRSARNEFRALQ 159

Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
           ++   GL VPK    + + +LM  I        ++++         ++    +  + + Y
Sbjct: 160 KLQ--GLAVPKVYAWEGNAVLMELIDAKELYRVRVEN-------PDEVLDMILEEVAKFY 210

Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
           +   +VH DLS+YN+LV +  ++IID  QSVE       + L +D  N+  +
Sbjct: 211 H-RGIVHGDLSQYNVLVSEEGIWIIDFPQSVEVGEEGWREILERDVRNIITY 261

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	351
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	100.0
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	100.0
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.9
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.9
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.9
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.9
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.88
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.87
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.86
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.86
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.86
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.85
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.84
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.84
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.84
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.83
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.83
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.83
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.83
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.83
3niz_A	311	Rhodanese family protein; structural genomics, str	99.83
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.82
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.82
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.82
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.82
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.82
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.82
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.81
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.81
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.81
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.81
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.81
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.81
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.81
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.81
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.81
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.81
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.81
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.81
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.81
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.81
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.81
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.81
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.81
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.81
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.81
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.81
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.81
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.81
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.81
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.81
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.81
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.8
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.8
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.8
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.8
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.8
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.8
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.8
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.8
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.8
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.8
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.8
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.8
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.8
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.8
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.8
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.8
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.8
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.8
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.8
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.8
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.8
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.8
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.8
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.8
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.8
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.8
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.8
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.8
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.8
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.8
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.79
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.79
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.79
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.79
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.79
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.79
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.79
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.79
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.79
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.79
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.79
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.79
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.79
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.79
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.79
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.79
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.79
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.79
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.79
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.79
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.79
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.79
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.79
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.79
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.79
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.79
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.79
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.79
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.79
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.79
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.79
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.79
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.79
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.79
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.79
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.79
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.78
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.78
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.78
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.78
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.78
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.78
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.78
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.78
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.78
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.78
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.78
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.78
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.78
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.78
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.78
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.78
3bhy_A	283	Death-associated protein kinase 3; death associate	99.78
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.78
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.78
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.78
3uqc_A	286	Probable conserved transmembrane protein; structur	99.78
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.78
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.78
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.78
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.78
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.78
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.78
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.78
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.78
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.78
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.78
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.78
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.78
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.78
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.77
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.77
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.77
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.77
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.77
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.77
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.77
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.77
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.77
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.77
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.77
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.77
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.77
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.77
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.77
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.77
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.77
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.77
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.77
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.77
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.77
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.77
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.77
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.77
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.77
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.77
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.77
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.77
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.76
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.76
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.76
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.76
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.76
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.76
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.76
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.76
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.76
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.76
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.76
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.76
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.76
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.76
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.76
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.76
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.76
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.76
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.76
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.76
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.76
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.76
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.76
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.75
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.75
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.75
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.75
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.75
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.75
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.74
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.74
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.74
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.74
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.74
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.74
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.74
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.74
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.74
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.73
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.73
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.73
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.73
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.73
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.72
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.72
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.72
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.72
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.71
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.71
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.68
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.66
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.66
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.5
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.5
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.48
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.23
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.19
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	99.12
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.1
3ats_A	357	Putative uncharacterized protein; hypothetical pro	99.09
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	99.07
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	99.05
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	99.05
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	99.02
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.0
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.83
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	98.82
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	98.8
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.79
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.76
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	98.76
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	98.63
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.41
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	98.39
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	98.37
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	98.32
3mes_A	424	Choline kinase; malaria, structural genomics, stru	98.2
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	98.04
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.68
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	82.9

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=100.00  E-value=8.9e-45  Score=360.49  Aligned_cols=192  Identities=27%  Similarity=0.463  Sum_probs=171.8

Q ss_pred             HHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCC
Q psy10135         24 RMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKK  103 (351)
Q Consensus        24 ~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~  103 (351)
                      .++|.+|+++|++|+|+++||+|+||+||+|.+ .+        |+.||||+++++...|+.    +.++.+|...+.+.
T Consensus        84 ~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d-~~--------G~~vAvKi~r~~~~sfr~----v~~~r~~~~~~~~~  150 (397)
T 4gyi_A           84 YLALHTHAARKDVYSVGSRIGVGKESDIMIVAD-EK--------GKQKVLKIHRLGRISFRT----VKANRDYLRNRSTG  150 (397)
T ss_dssp             HHHHHHHHHTTSCSEEEEEEEECSSEEEEEEEC-TT--------CCEEEEEEECTTEECCCC----CC--CEECTTSCHH
T ss_pred             HHHHHHHHHCCCEEEecCEeeeCCceEEEEEEC-CC--------CCEEEEEEEecccccHHH----HHHHHHHHHhhccc
Confidence            578999999999999999999999999999998 66        999999999998877754    33445666667778


Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        104 NPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       104 n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ++++++++|+++|++||.+|+.+|+++|.|+....++||||||  +|.+++++....    ++..++.||+.+|.+|| +
T Consensus       151 ~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~~~~~~LVME~i--~G~~L~~l~~~~----~~~~l~~qll~~l~~lH-~  223 (397)
T 4gyi_A          151 SWMYLSRLAAIKEFAFMKALYEEGFPVPEPIAQSRHTIVMSLV--DALPMRQVSSVP----DPASLYADLIALILRLA-K  223 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEEEETTEEEEECC--SCEEGGGCCCCS----CHHHHHHHHHHHHHHHH-H
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeeccCceEEEEec--CCccHhhhcccH----HHHHHHHHHHHHHHHHH-H
Confidence            8999999999999999999999999999999999999999999  688888776542    45789999999999999 5


Q ss_pred             CCccccCCCCCceEEeCC-----------eEEEEEccccccCCCCChHHHHHhhhhhhhhccc
Q psy10135        184 CHLVHADLSEYNMLVHKA-----------TLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI  235 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~g-----------~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~  235 (351)
                      +|||||||||+|||++++           .++||||||||..+||+|.+||+|||.||.+||.
T Consensus       224 ~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~a~~~l~RDv~ni~~fF~  286 (397)
T 4gyi_A          224 HGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPNAEMYFDRDVQCIKRFFE  286 (397)
T ss_dssp             TTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCCChHHHHHHHHHHHHHHHH
Confidence            999999999999999654           3999999999999999999999999999999994

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=100.00  E-value=2.1e-43  Score=329.32  Aligned_cols=236  Identities=39%  Similarity=0.613  Sum_probs=199.0

Q ss_pred             cccccccchhhhhhhhCChhHHHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcE--EEEEEeeCCc
Q psy10135          3 RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKE--FAIKIFKTSI   80 (351)
Q Consensus         3 ~~~~~d~~~~~t~~~v~d~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~--vAIKi~k~s~   80 (351)
                      |.|.||+++++|+++|+|++|++.|.+++++|.+|++.++||+|+||.||+|.+..+        |+.  ||||+++.+.
T Consensus        15 ~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~--------g~~~~vAvK~~~~~~   86 (258)
T 1zth_A           15 RIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFD--------GKPVAMAVKIYRIET   86 (258)
T ss_dssp             TCCTTSTTHHHHHHHHCCHHHHHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEET--------TEEEEEEEEEECCC-
T ss_pred             HhhccchhhhhHHHhcCCHHHHHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCC--------CcEeeEEEEEEECCc
Confidence            578899999999999999999999999999999999999999999999999987445        888  9999999887


Q ss_pred             hhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCC
Q psy10135         81 LVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTP  160 (351)
Q Consensus        81 ~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~  160 (351)
                      ..|+....|+.|++||...  +.+++.+.+.|+.+|+++|.+|.+.|+++|.++....++|||||+|.+|.+++.|.+..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~  164 (258)
T 1zth_A           87 SEFDKMDEYLYGDERFDMR--RISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELG  164 (258)
T ss_dssp             ------GGGTTTCTTSCC------CHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHG
T ss_pred             cchhhHHHhhcccchhhhh--ccChHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHh
Confidence            7888888999999998763  46778889999999999999999999999999998899999999975587777776532


Q ss_pred             --CCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCC
Q psy10135        161 --LTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNP  238 (351)
Q Consensus       161 --l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~  238 (351)
                        ++..++..++.||+.+|.+||+.+|||||||||+|||+++ .++|||||+|+..+||++.+||.+||.|+.+||... 
T Consensus       165 ~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~-~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~~~-  242 (258)
T 1zth_A          165 RELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID-KVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSKY-  242 (258)
T ss_dssp             GGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS-SEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHTT-
T ss_pred             hccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC-cEEEEECcccccCCCccHHHHHHHHHHHHHHHHHHc-
Confidence              2245788999999999999994499999999999999988 999999999999999999999999999999999543 


Q ss_pred             CCC-cHHHHHHhh
Q psy10135        239 VSD-DDEKIFKKW  250 (351)
Q Consensus       239 ~~~-~~~~~~~~~  250 (351)
                      ++. +..++++.+
T Consensus       243 g~~~~~~~~~~~~  255 (258)
T 1zth_A          243 GVKADFEEMLKEV  255 (258)
T ss_dssp             TCCCCHHHHHHHH
T ss_pred             CCCCCHHHHHHHH
Confidence            433 245555543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.97  E-value=2.7e-30  Score=244.45  Aligned_cols=205  Identities=22%  Similarity=0.322  Sum_probs=160.8

Q ss_pred             CChhHHHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccc
Q psy10135         19 MDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRH   98 (351)
Q Consensus        19 ~d~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~   98 (351)
                      ++..+...+.++.++|.+|.+.+.||+|+||.||+|.+ .+        |+.||||+++.....+.....+..       
T Consensus        74 ~~~~~~~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~--------g~~valK~~~~~~~~~~~~~~~~~-------  137 (282)
T 1zar_A           74 FIGLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EK--------FGECVVKFHKVGHTSFKKVKEKRD-------  137 (282)
T ss_dssp             HHHHHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TT--------TEEEEEEEECC------CCCC----------
T ss_pred             cCCccHHHHHHHHhCCeEEEecCEeccCCCceEEEEEe-CC--------CCEEEEEEEECCCCchhhhhhhhh-------
Confidence            34566788999999999999999999999999999999 77        999999999876544443322211       


Q ss_pred             cccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHH
Q psy10135         99 GYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMW  178 (351)
Q Consensus        99 ~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~  178 (351)
                       |....+.......+.+|+.+|.+|. . +++|.++....++|||||+.  |..+..+.     ..++..++.|++.+|.
T Consensus       138 -~~~~~w~~~~~~~~~~E~~~l~~l~-~-~~v~~~~~~~~~~lvmE~~~--g~~L~~l~-----~~~~~~i~~qi~~~l~  207 (282)
T 1zar_A          138 -YGDLHFSVLAIRSARNEFRALQKLQ-G-LAVPKVYAWEGNAVLMELID--AKELYRVR-----VENPDEVLDMILEEVA  207 (282)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHTT-T-SSSCCEEEEETTEEEEECCC--CEEGGGCC-----CSCHHHHHHHHHHHHH
T ss_pred             -hcchhhHHHHHHHHHHHHHHHHhcc-C-CCcCeEEeccceEEEEEecC--CCcHHHcc-----hhhHHHHHHHHHHHHH
Confidence             0023444556777889999999999 5 89999998888999999994  53433332     2345689999999999


Q ss_pred             HHHhhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCC-cHHHHHHhh
Q psy10135        179 RLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD-DDEKIFKKW  250 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~-~~~~~~~~~  250 (351)
                      +|| ++|||||||||.|||++++.++|||||+|+...||+|.+++.+|+.++..||...+++. +..+.++.+
T Consensus       208 ~lH-~~giiHrDlkp~NILl~~~~vkl~DFG~a~~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~~~~~  279 (282)
T 1zar_A          208 KFY-HRGIVHGDLSQYNVLVSEEGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRI  279 (282)
T ss_dssp             HHH-HTTEECSCCSTTSEEEETTEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             HHH-HCCCEeCCCCHHHEEEECCcEEEEECCCCeECCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHH
Confidence            999 59999999999999999889999999999999999999999999999999995554543 355555544

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=3.5e-25  Score=210.01  Aligned_cols=144  Identities=17%  Similarity=0.225  Sum_probs=107.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++........                       ......+|
T Consensus        15 Y~i~~~lG~G~fg~V~~~~~~~~--------~~~vAiK~i~~~~~~~~~-----------------------~~~~~~~E   63 (275)
T 3hyh_A           15 YQIVKTLGEGSFGKVKLAYHTTT--------GQKVALKIINKKVLAKSD-----------------------MQGRIERE   63 (275)
T ss_dssp             CEEEEEEEC---CCEEEEECTTT--------CCEEEEEEEECC-----------------------------CHHHHHHH
T ss_pred             eEEEEEEecCcCeEEEEEEECCC--------CCEEEEEEEeHHHcCCHH-----------------------HHHHHHHH
Confidence            99999999999999999998677        999999999764221100                       01224679


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|++|.+.+| .+-..+.. ...+|||||++  |.....+. ..++++.+++.++.||+.+|.+|| ++|||||||||
T Consensus        64 i~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~--g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH-~~~IiHRDiKP  140 (275)
T 3hyh_A           64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG--NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKP  140 (275)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC--EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCT
T ss_pred             HHHHHHCCCCCCCeEEEEEEECCEEEEEEeCCC--CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCh
Confidence            999999987653 33233322 44589999994  65555554 357999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||++ ++.++|+|||+|...
T Consensus       141 ~NILl~~~~~vkl~DFGla~~~  162 (275)
T 3hyh_A          141 ENLLLDEHLNVKIADFGLSNIM  162 (275)
T ss_dssp             TTEEECTTCCEEECCSSCC---
T ss_pred             HHeEECCCCCEEEeecCCCeec
Confidence            999995 689999999999654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=2.5e-25  Score=214.65  Aligned_cols=145  Identities=16%  Similarity=0.169  Sum_probs=113.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-..                       ......+|
T Consensus        34 y~i~~~lG~G~fg~V~~a~~~~~--------~~~~AiK~i~k~~~~~~~-----------------------~~~~~~~E   82 (311)
T 4aw0_A           34 FKFGKILGEGSFSTVVLARELAT--------SREYAIKILEKRHIIKEN-----------------------KVPYVTRE   82 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEHHHHHHTT-----------------------CHHHHHHH
T ss_pred             cEEEEEEecccCeEEEEEEECCC--------CCEEEEEEEEHHHCCCHH-----------------------HHHHHHHH
Confidence            99999999999999999999777        999999999753211000                       01124579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|++|.+.+| ..-..+.. ...+|||||+. +|.+...+.. ..+++.+++.++.||+.+|.+|| .+|||||||||
T Consensus        83 ~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~-gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH-~~~IiHRDlKP  160 (311)
T 4aw0_A           83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-GKGIIHRDLKP  160 (311)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT-TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSG
T ss_pred             HHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCH
Confidence            999999977653 33333332 44589999996 4555555543 57999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||++ +|.++|+|||+|...
T Consensus       161 eNILl~~~g~vKl~DFGla~~~  182 (311)
T 4aw0_A          161 ENILLNEDMHIQITDFGTAKVL  182 (311)
T ss_dssp             GGEEECTTSCEEECCCTTCEEC
T ss_pred             HHeEEcCCCCEEEEEcCCceec
Confidence            999994 689999999999754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=4.5e-25  Score=216.07  Aligned_cols=145  Identities=13%  Similarity=0.153  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++......+                        ......+|
T Consensus        26 Y~~~~~lG~G~fg~V~~a~~~~~--------~~~vAiK~i~~~~~~~~------------------------~~~~~~~E   73 (350)
T 4b9d_A           26 YVRLQKIGEGSFGKAILVKSTED--------GRQYVIKEINISRMSSK------------------------EREESRRE   73 (350)
T ss_dssp             EEEEEEC------CEEEEEETTT--------CCEEEEEEEECTTSCHH------------------------HHHHHHHH
T ss_pred             eEEeEEEecCCCeEEEEEEECCC--------CCEEEEEEEehHHCCHH------------------------HHHHHHHH
Confidence            89999999999999999999777        99999999976422111                        11234579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +.+|.+|.+.+| .+-..+.. ...+||||||. +|.+...+..   ..+++.+++.++.||+.+|.+|| .+|||||||
T Consensus        74 ~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~-gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH-~~~IiHRDl  151 (350)
T 4b9d_A           74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCE-GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH-DRKILHRDI  151 (350)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT-TCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HTTCEETTC
T ss_pred             HHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCC-CCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccC
Confidence            999999987663 33333322 44689999995 4555555532   34688889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||+|||+. +|.++|+|||+|....
T Consensus       152 Kp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          152 KSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             CGGGEEECTTCCEEECSTTEESCCC
T ss_pred             CHHHEEECCCCCEEEcccccceeec
Confidence            99999994 6899999999997653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=5.7e-25  Score=215.02  Aligned_cols=143  Identities=15%  Similarity=0.132  Sum_probs=113.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++.....  .                    +.    ...+
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~t--------g~~vAiK~i~~~~~~--~--------------------~~----~~~~  120 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSS--------GKLVAVKKMDLRKQQ--R--------------------RE----LLFN  120 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEGGGCS--S--------------------GG----GGHH
T ss_pred             hcEEeEEeecCcCeEEEEEEECCC--------CCEEEEEEEecCchh--H--------------------HH----HHHH
Confidence            499999999999999999999777        999999998742110  0                    00    1246


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+.+|++|.+.+| ..-..+.. ...+|||||+. +|.....+...++++.+++.++.||+.+|.+|| .+|||||||||
T Consensus       121 Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~-gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp  198 (346)
T 4fih_A          121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE-GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKS  198 (346)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT-TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC-CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCH
Confidence            9999999977653 33333322 45689999996 455555556678999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||++ +|.++|+|||+|...
T Consensus       199 ~NILl~~~g~vKl~DFGla~~~  220 (346)
T 4fih_A          199 DSILLTHDGRVKLSDFGFCAQV  220 (346)
T ss_dssp             GGEEECTTCCEEECCCTTCEEC
T ss_pred             HHEEECCCCCEEEecCcCceec
Confidence            999994 689999999999765

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.91  E-value=2.1e-24  Score=216.15  Aligned_cols=143  Identities=15%  Similarity=0.126  Sum_probs=113.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++......                      +.    ...+
T Consensus       152 ~y~~~~~iG~G~fG~V~~a~~~~t--------g~~vAiK~i~~~~~~~----------------------~~----~~~~  197 (423)
T 4fie_A          152 YLDNFIKIGEGSTGIVCIATVRSS--------GKLVAVKKMDLRKQQR----------------------RE----LLFN  197 (423)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEESTTCSS----------------------GG----GHHH
T ss_pred             hcEeeeEeccCcCcEEEEEEECCC--------CCEEEEEEEeccchhH----------------------HH----HHHH
Confidence            499999999999999999999777        9999999987531100                      00    1246


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+.+|++|.+.+| ..-..+.. ...|||||||. +|.+...++...+++.++..++.||+.+|.+|| .+|||||||||
T Consensus       198 Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~-gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH-~~~IiHRDiKp  275 (423)
T 4fie_A          198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE-GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKS  275 (423)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT-TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCST
T ss_pred             HHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC-CCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HCCeecccCCH
Confidence            9999999977653 33333322 45689999996 455555556678999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||+. +|.++|+|||+|...
T Consensus       276 ~NILl~~~g~vKl~DFGla~~~  297 (423)
T 4fie_A          276 DSILLTHDGRVKLSDFGFCAQV  297 (423)
T ss_dssp             TTEEECTTCCEEECCCTTCEEC
T ss_pred             HHEEEcCCCCEEEecCccceEC
Confidence            999994 689999999999754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.90  E-value=7.6e-24  Score=202.15  Aligned_cols=148  Identities=17%  Similarity=0.117  Sum_probs=112.1

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      .|-.|++...||+|+||.||+|.+..+        |+.||||++.......                        .....
T Consensus        24 ~gr~~~~~~~iG~G~fg~Vy~a~~~~~--------~~~vAiK~i~~~~~~~------------------------~~~~~   71 (290)
T 3fpq_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTET--------TVEVAWCELQDRKLTK------------------------SERQR   71 (290)
T ss_dssp             TSSEEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEGGGSCH------------------------HHHHH
T ss_pred             CCceEEeeeEEecCcCcEEEEEEECCC--------CeEEEEEEEchhhCCH------------------------HHHHH
Confidence            355678889999999999999999777        9999999987532110                        11122


Q ss_pred             HHHHHHHHHHhhhCCC-Cccccccc-----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        113 AEKEMRNLTRMYSEGL-NVPKPILL-----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       113 aekE~~nL~rL~~~gi-~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      ..+|+.+|++|.+.+| .+-..+..     ...+|||||+. +|.+...+.. ..++...+..++.||+.+|.+||. +|
T Consensus        72 ~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~-gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~-~~  149 (290)
T 3fpq_A           72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT-SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT-RT  149 (290)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-SS
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence            4579999999987763 22222211     22479999996 4555444543 468999999999999999999994 78


Q ss_pred             --ccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        186 --LVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 --lVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                        ||||||||+|||+.  +|.++|+|||+|...
T Consensus       150 ~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             CCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence              99999999999995  589999999999643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.90  E-value=8.9e-24  Score=202.02  Aligned_cols=144  Identities=17%  Similarity=0.177  Sum_probs=102.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                         ........+|
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~--------~~~vAiK~i~~~~~-------------------------~~~~~~~~~E   53 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVD--------DCNYAIKRIRLPNR-------------------------ELAREKVMRE   53 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTT--------CCEEEEEEEEECSS-------------------------HHHHHHHHHH
T ss_pred             CEEeeEEecCCCeEEEEEEECCC--------CCEEEEEEEeccCC-------------------------HHHHHHHHHH
Confidence            89999999999999999999777        99999999864210                         0112234679


Q ss_pred             HHHHHHhhhCCC-Ccccccccc-------------ceEEEEcccCcccccccccccC-C---CCHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLK-------------SHVLLMTFIGEDGWPAAKLKDT-P---LTESGACKLYRECVVMMW  178 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~-------------~~vLVMEfig~~G~~~~~L~~~-~---l~~~~~~~l~~qll~~L~  178 (351)
                      +.+|.+|.+.+| ..-..+...             ..+|||||+. +|.....+... .   .+...+..++.||+.+|.
T Consensus        54 ~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~-gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~  132 (299)
T 4g31_A           54 VKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCR-KENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE  132 (299)
T ss_dssp             HHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCC-SCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCC-CCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHH
Confidence            999999977653 222222111             1479999995 44444444332 1   333457889999999999


Q ss_pred             HHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|| .+|||||||||+|||+. +|.++|+|||+|...+
T Consensus       133 ylH-~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~  169 (299)
T 4g31_A          133 FLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD  169 (299)
T ss_dssp             HHH-HTTCCCCCCCGGGEEECTTCCEEECCCCCC----
T ss_pred             HHH-HCcCccccCcHHHeEECCCCcEEEccCccceecC
Confidence            999 59999999999999994 6899999999997643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.90  E-value=8.4e-24  Score=209.99  Aligned_cols=144  Identities=17%  Similarity=0.178  Sum_probs=111.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t--------~~~vAiK~i~~~~~~~------------------------~~~~~~~~  102 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLT--------GQQVAIKKIPNAFDVV------------------------TNAKRTLR  102 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEETTTTSSH------------------------HHHHHHHH
T ss_pred             CeEEEEEEecccCeEEEEEEECCC--------CCEEEEEEECccccch------------------------HHHHHHHH
Confidence            399999999999999999999777        9999999987532100                        01112357


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |+.+|++|.+.+| .+-..+.       ....||||||++  |.+...+.. ..++..+++.++.||+.+|.+|| .+||
T Consensus       103 Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~--g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH-~~~i  179 (398)
T 4b99_A          103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME--SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH-SAQV  179 (398)
T ss_dssp             HHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS--EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred             HHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCcC
Confidence            9999999987653 2222211       134589999995  555555543 46999999999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||+|||++ +|.++|+|||+|...
T Consensus       180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          180 IHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             BCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             cCCCcCccccccCCCCCEEEeecceeeec
Confidence            9999999999995 689999999999643

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.90  E-value=5.6e-24  Score=207.20  Aligned_cols=138  Identities=14%  Similarity=0.137  Sum_probs=108.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++...               +.                .+
T Consensus        59 ~~~~~~~lG~G~fG~Vy~a~~~~~--------g~~vAiK~i~~~~---------------~~----------------~~   99 (336)
T 4g3f_A           59 WMTHQPRVGRGSFGEVHRMKDKQT--------GFQCAVKKVRLEV---------------FR----------------VE   99 (336)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEETTT---------------CC----------------TH
T ss_pred             heEeCcEeccCCCeEEEEEEECCC--------CCEEEEEEECHHH---------------hH----------------HH
Confidence            478889999999999999999777        9999999987521               10                24


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|.+|.+.+| .+-..+.. ...+|||||+. +|.+...|+. ..+++.++..++.||+.+|.+|| .+||||||||
T Consensus       100 E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~-gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlK  177 (336)
T 4g3f_A          100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE-GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH-TRRILHGDVK  177 (336)
T ss_dssp             HHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCC
T ss_pred             HHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCceecccC
Confidence            7888888876653 22222222 34579999995 4555445543 46999999999999999999999 5999999999


Q ss_pred             CCceEEe-CC-eEEEEEccccccC
Q psy10135        193 EYNMLVH-KA-TLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g-~l~IIDFG~Av~~  214 (351)
                      |+|||++ +| +++|+|||+|...
T Consensus       178 p~NILl~~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          178 ADNVLLSSDGSRAALCDFGHALCL  201 (336)
T ss_dssp             GGGEEECTTSCCEEECCCTTCEEC
T ss_pred             HHHEEEeCCCCEEEEeeCCCCeEc
Confidence            9999995 55 6999999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.90  E-value=2.4e-24  Score=207.03  Aligned_cols=147  Identities=18%  Similarity=0.218  Sum_probs=105.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+     ...++.||||+++.......+..       +                 ..+|
T Consensus        26 Y~i~~~lG~G~fg~Vy~a~~~~~-----~~~~~~vAiK~i~~~~~~~~~~~-------~-----------------~~~E   76 (304)
T 3ubd_A           26 FELLKVLGQGSFGKVFLVKKISG-----SDARQLYAMKVLKKATLKVRDRV-------R-----------------TKME   76 (304)
T ss_dssp             EEEEEEEECGGGCEEEEEEECSS-----TTTTCEEEEEEEESEEEEEEECC-----------------------------
T ss_pred             cEEEEEEecCCCeEEEEEEEccC-----CCCCEEEEEEEEehHHcChHHHH-------H-----------------HHHH
Confidence            99999999999999999987321     01278999999986432111100       1                 2357


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ..+|.+|.+.+| .+-..+.. ...+|||||+. +|.+...+.. ..+++.+++.++.||+.+|.+|| ++|||||||||
T Consensus        77 ~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~-gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp  154 (304)
T 3ubd_A           77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR-GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH-SLGIIYRDLKP  154 (304)
T ss_dssp             -CCCCCCCCTTEECEEEEEEETTEEEEEECCCT-TCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCG
T ss_pred             HHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCCCH
Confidence            777877766552 22222222 45689999995 4555555543 56999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||++ +|.++|+|||+|...
T Consensus       155 ~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A          155 ENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             GGEEECTTSCEEEESSEEEEC-
T ss_pred             HHeEEcCCCCEEecccccceec
Confidence            999995 689999999999743

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.89  E-value=3.5e-23  Score=199.15  Aligned_cols=141  Identities=16%  Similarity=0.107  Sum_probs=106.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+.+.||+|+||.||+|..           ...||||+++......                        .......+|
T Consensus        38 l~l~~~iG~G~fG~Vy~~~~-----------~~~vAvK~~~~~~~~~------------------------~~~~~f~~E   82 (307)
T 3omv_A           38 VMLSTRIGSGSFGTVYKGKW-----------HGDVAVKILKVVDPTP------------------------EQFQAFRNE   82 (307)
T ss_dssp             CCEEEECCCCSSSEEEEEES-----------SSEEEEEECCCSSCCH------------------------HHHHHHHHH
T ss_pred             eEEeeEEeeCCCcEEEEEEE-----------CCcEEEEEEEecCCCH------------------------HHHHHHHHH
Confidence            46789999999999999986           3369999987532110                        011224579


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.+|.+.+| ..-........+|||||+. +|.+...|.  ..+++..++..++.||+.+|.+|| ..|||||||||
T Consensus        83 ~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~-gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~IiHRDlKp  160 (307)
T 3omv_A           83 VAVLRKTRHVNILLFMGYMTKDNLAIVTQWCE-GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH-AKNIIHRDMKS  160 (307)
T ss_dssp             HHHHTTCCCTTBCCEEEEECSSSCEEEEECCS-SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCCS
T ss_pred             HHHHHhCCCCCEeeEEEEEECCeEEEEEEcCC-CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCccCH
Confidence            999999987763 2222222345689999996 565555553  346899999999999999999999 58999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||+|...
T Consensus       161 ~NILl~~~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          161 NNIFLHEGLTVKIGDFGLATVK  182 (307)
T ss_dssp             SSEEEETTEEEEECCCSSCBC-
T ss_pred             HHEEECCCCcEEEeeccCceec
Confidence            999996 578999999999643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.88  E-value=8.3e-23  Score=195.11  Aligned_cols=138  Identities=21%  Similarity=0.196  Sum_probs=104.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|..  +        |+.||||+++...                           ......+.|
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~--~--------g~~VAvK~l~~~~---------------------------~~~~~~e~E   47 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW--R--------GEEVAVKIFSSRE---------------------------ERSWFREAE   47 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE--T--------TEEEEEEEECGGG---------------------------HHHHHHHHH
T ss_pred             EEEEEEEeeCCCeEEEEEEE--C--------CEEEEEEEECccc---------------------------hhhHHHHHH
Confidence            67889999999999999987  3        8899999986421                           001122456


Q ss_pred             HHHHHHhhhCCC-Cccccccc-----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhC------
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC------  184 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~------  184 (351)
                      +..+.+|.+.+| ..-.....     ...+|||||+. +|.+...|...+++..+...++.|++.+|.+||. .      
T Consensus        48 i~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~-~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~-~~~~~~~  125 (303)
T 3hmm_A           48 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE-HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHM-EIVGTQG  125 (303)
T ss_dssp             HHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT-TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHC-CBCSTTC
T ss_pred             HHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC-CCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH-hhhhccC
Confidence            666667766553 11111111     12479999996 5666666777788999999999999999999995 4      


Q ss_pred             --CccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        185 --HLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       185 --glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                        |||||||||.|||++ ++.++|+|||+|..
T Consensus       126 ~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A          126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             BCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence              899999999999995 68999999999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.87  E-value=3.8e-22  Score=195.39  Aligned_cols=143  Identities=17%  Similarity=0.183  Sum_probs=106.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|+|.+.||+|+||.||+|.+..+     .+.++.||||++.....                            .....+
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~-----~~~~~~vAiK~i~~~~~----------------------------~~~~~~   68 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQ-----VGPEEKIALKHLIPTSH----------------------------PIRIAA   68 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBT-----TSCEEEEEEEEECTTSC----------------------------HHHHHH
T ss_pred             cEEEEEEEecccCcEEEEEEEccc-----CCCCCEEEEEEEccccC----------------------------HHHHHH
Confidence            499999999999999999986311     11278899998764210                            011346


Q ss_pred             HHHHHHHhh-hCC-CCccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMY-SEG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~-~~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.++. +.+ +..-..+.. ...+|||||+. .|.....+.  .++..+++.++.||+.+|.+|| .+||||||||
T Consensus        69 E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~-g~~L~~~~~--~l~~~~~~~~~~qll~al~ylH-~~gIiHRDiK  144 (361)
T 4f9c_A           69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLE-HESFLDILN--SLSFQEVREYMLNLFKALKRIH-QFGIVHRDVK  144 (361)
T ss_dssp             HHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCC-CCCHHHHHT--TCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCS
T ss_pred             HHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCC-cccHHHHHc--CCCHHHHHHHHHHHHHHHHHHH-HCCeEeCcCC
Confidence            888898883 443 333333333 34579999995 344433332  5889999999999999999999 5999999999


Q ss_pred             CCceEEe-C-CeEEEEEccccccCC
Q psy10135        193 EYNMLVH-K-ATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~-g~l~IIDFG~Av~~~  215 (351)
                      |+|||++ + +.++|+|||+|....
T Consensus       145 PeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A          145 PSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             GGGEEEETTTTEEEECCCTTCEECT
T ss_pred             HHHeEEeCCCCeEEECcCCCCcccC
Confidence            9999995 3 799999999997554

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.87  E-value=3.2e-22  Score=191.43  Aligned_cols=146  Identities=21%  Similarity=0.142  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.....   .....|..||||+++.....                          ......+|
T Consensus        15 ~~l~~~lG~G~fG~Vy~a~~~~~---~~~~~~~~vAvK~l~~~~~~--------------------------~~~~f~~E   65 (299)
T 4asz_A           15 IVLKRELGEGAFGKVFLAECYNL---CPEQDKILVAVKTLKDASDN--------------------------ARKDFHRE   65 (299)
T ss_dssp             EEEEEEEEC--CCCEEEEEECSC---C----CEEEEEEEECSCCHH--------------------------HHHHHHHH
T ss_pred             eEEeeEEeeCCCcEEEEEEECCc---ccCCCCEEEEEEEeCCCChH--------------------------HHHHHHHH
Confidence            77889999999999999986311   00112788999998753210                          11123579


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--------------CCCCHHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--------------TPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--------------~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      +..|.+|.+.+| ..-..+. ....+|||||+. .|.+...|..              ..++..++..++.||+.+|.+|
T Consensus        66 ~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~-~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  144 (299)
T 4asz_A           66 AELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK-HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL  144 (299)
T ss_dssp             HHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT-TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCC-CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999977653 2222211 145689999996 5555444432              2588899999999999999999


Q ss_pred             HhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        181 YNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      | ..+||||||||.|||++ ++.++|+|||+|..
T Consensus       145 H-~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~  177 (299)
T 4asz_A          145 A-SQHFVHRDLATRNCLVGENLLVKIGDFGMSRD  177 (299)
T ss_dssp             H-HTTCCCSCCSGGGEEECGGGCEEECCCSCHHH
T ss_pred             H-hCCcccCccCHhhEEECCCCcEEECCccccee
Confidence            9 59999999999999995 67999999999964

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.86  E-value=1.1e-21  Score=189.97  Aligned_cols=147  Identities=18%  Similarity=0.106  Sum_probs=102.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+.+.||+|+||.||+|.....   .....++.||||+++.....                          .+....+|
T Consensus        43 ~~l~~~LG~G~fG~Vy~a~~~~~---~~~~~~~~vAvK~l~~~~~~--------------------------~~~~f~~E   93 (329)
T 4aoj_A           43 IVLKWELGEGAFGKVFLAECHNL---LPEQDKMLVAVKALKEASES--------------------------ARQDFQRE   93 (329)
T ss_dssp             EEEEEEEEECSSEEEEEEEESSS---CC---CEEEEEEEESCCSHH--------------------------HHHHHHHH
T ss_pred             eEEEEEEccCCCcEEEEEEECCc---ccCCCCeEEEEEEECcCCHH--------------------------HHHHHHHH
Confidence            56778999999999999986310   00112789999998753210                          11124579


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc----------------cCCCCHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK----------------DTPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~----------------~~~l~~~~~~~l~~qll~~L~  178 (351)
                      +..|.+|.+.+| ..-..+. ....+|||||+. .|.+...|.                ..+++..++..++.||+.+|.
T Consensus        94 ~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~-~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~  172 (329)
T 4aoj_A           94 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR-HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMV  172 (329)
T ss_dssp             HHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT-TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC-CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHH
Confidence            999999987653 2211111 144689999996 454433332                135888899999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|| ..|||||||||.|||++ ++.++|+|||+|...
T Consensus       173 yLH-~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~  208 (329)
T 4aoj_A          173 YLA-GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI  208 (329)
T ss_dssp             HHH-HTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             HHh-cCCeecccccHhhEEECCCCcEEEcccccceec
Confidence            999 59999999999999995 589999999999754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.86  E-value=6e-22  Score=208.34  Aligned_cols=168  Identities=14%  Similarity=0.151  Sum_probs=116.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++......+...                   .. ......+
T Consensus       191 f~i~k~LG~G~fG~V~la~~~~t--------g~~~AiK~i~K~~i~~~~~~-------------------~~-~~~E~~~  242 (689)
T 3v5w_A          191 FSVHRIIGRGGFGEVYGCRKADT--------GKMYAMKCLDKKRIKMKQGE-------------------TL-ALNERIM  242 (689)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHHTTCH-------------------HH-HHHHHHH
T ss_pred             eEEEEEEecccCeEEEEEEECCC--------CCEEEEEEEeHHHcchhhhH-------------------HH-HHHHHHH
Confidence            99999999999999999999777        99999999976322111100                   00 0011122


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..+..+.+..| ..-..+.. ...+|||||+. +|.+...|.. ..+++..++.++.||+.+|.+|| .+|||||||||
T Consensus       243 l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~-GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH-~~gIiHRDLKP  320 (689)
T 3v5w_A          243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN-GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-NRFVVYRDLKP  320 (689)
T ss_dssp             HHHHSSSCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSG
T ss_pred             HHHHhhCCCCCEeEEEEEEEECCEEEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCch
Confidence            333333333332 22222222 44689999996 5665555543 56999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC-----------CCChHHHHHhh--hhhhhhcc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD-----------HPHALQFLRKD--CDNVTVFV  234 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~-----------~p~a~~fl~~D--~~~v~~ff  234 (351)
                      +|||++ +|.++|+|||+|....           ..+|.|.+.+.  ...-.|+|
T Consensus       321 eNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiW  375 (689)
T 3v5w_A          321 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF  375 (689)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHH
T ss_pred             HHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHH
Confidence            999995 6899999999997653           23467777532  33445655

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.86  E-value=2.3e-21  Score=200.64  Aligned_cols=143  Identities=20%  Similarity=0.268  Sum_probs=112.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+..+        |+.||||+++.....                          .+....+|
T Consensus       159 Y~i~~~lG~G~fg~V~~~~~~~t--------g~~~AiK~i~~~~~~--------------------------~~~~~~~E  204 (573)
T 3uto_A          159 YDIHEELGTGAFGVVHRVTERAT--------GNNFAAKFVMTPHES--------------------------DKETVRKE  204 (573)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECCSHH--------------------------HHHHHHHH
T ss_pred             cEEEEEEeeccCeEEEEEEECCC--------CCEEEEEEEeccchh--------------------------hHHHHHHH
Confidence            89999999999999999999777        999999998753211                          01224579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|..|.+.+| .+-..+.. ...+|||||+. +|.+...+..  ..+++.+++.++.||+.+|.+|| .+||||||||
T Consensus       205 i~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~-gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH-~~~iiHRDlK  282 (573)
T 3uto_A          205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS-GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLK  282 (573)
T ss_dssp             HHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC-CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH-HTTEECCCCC
T ss_pred             HHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC-CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCC
Confidence            999999987653 33333322 44589999995 4555555533  46889999999999999999999 5999999999


Q ss_pred             CCceEEe---CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH---KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~---~g~l~IIDFG~Av~~~  215 (351)
                      |+|||+.   .+.++|+|||+|...+
T Consensus       283 p~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          283 PENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             GGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             hhhccccCCCCCCEEEeeccceeEcc
Confidence            9999994   3789999999997653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.85  E-value=1.7e-21  Score=187.17  Aligned_cols=148  Identities=19%  Similarity=0.138  Sum_probs=104.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +++.+.||+|+||.||+|.....   .....++.||||+++....     ..                    .+....+|
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~---~~~~~~~~VAvK~l~~~~~-----~~--------------------~~~~f~~E   79 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGP---APGEQTQAVAIKTLKDKAE-----GP--------------------LREEFRHE   79 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC----------CEEEEEEECCC-CC-----C---------------------CHHHHHHH
T ss_pred             CeEeeEeccCCCcEEEEEEEcCC---ccCCCCeEEEEEEECcccC-----hH--------------------HHHHHHHH
Confidence            56788999999999999985211   0001278999999875210     00                    01123569


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECVVMM  177 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll~~L  177 (351)
                      +..|.+|.+.+| ..-.... ....+|||||+. .|.+...|.                 ...++..++..++.||+.+|
T Consensus        80 ~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~-~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  158 (308)
T 4gt4_A           80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS-HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM  158 (308)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSSCEEEEECCS-SCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCcceEEEECCEEEEEEEcCC-CCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence            999999987663 2111111 134589999996 555544442                 13478888999999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .+|| ..+||||||||.|||++ ++.++|+|||+|...
T Consensus       159 ~yLH-~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~  195 (308)
T 4gt4_A          159 EYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV  195 (308)
T ss_dssp             HHHH-HTTCCCSCCSGGGEEECGGGCEEECCSCCBCGG
T ss_pred             HHHH-hCCCCCCCccccceEECCCCCEEECCcccceec
Confidence            9999 59999999999999995 589999999999643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.84  E-value=1.4e-20  Score=179.43  Aligned_cols=149  Identities=16%  Similarity=0.115  Sum_probs=106.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+  +        |+.||||+++........      +.          ..  .......+|
T Consensus        22 y~~~~~lG~G~~g~V~~~~~--~--------~~~vAvK~~~~~~~~~~~------~~----------~~--~~~~~~~~E   73 (336)
T 2vuw_A           22 LQRCEKIGEGVFGEVFQTIA--D--------HTPVAIKIIAIEGPDLVN------GS----------HQ--KTFEEILPE   73 (336)
T ss_dssp             HHTCEEEEEETTEEEEEEEE--T--------TEEEEEEEEEESCSSCBT------TB----------CC--BCHHHHHHH
T ss_pred             chheeeecccCceEEEEEEe--C--------CceEEEEEEecCCccccc------cc----------cc--hhHHHHHHH
Confidence            88899999999999999987  4        899999999864211000      00          00  001123457


Q ss_pred             HHHHHHhh---------hCCCC------------ccccc--------------------cccceEEEEcccCcccccccc
Q psy10135        117 MRNLTRMY---------SEGLN------------VPKPI--------------------LLKSHVLLMTFIGEDGWPAAK  155 (351)
Q Consensus       117 ~~nL~rL~---------~~gi~------------vP~pi--------------------~~~~~vLVMEfig~~G~~~~~  155 (351)
                      +.+|++|.         +.+|.            .|..+                    .....+|||||+. .|..+..
T Consensus        74 ~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~-~g~ll~~  152 (336)
T 2vuw_A           74 IIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF-GGIDLEQ  152 (336)
T ss_dssp             HHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEEC-CCEETGG
T ss_pred             HHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecC-CCccHHH
Confidence            77777765         22210            11111                    1345689999995 4555666


Q ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CC--------------------eEEEEEccccccC
Q psy10135        156 LKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KA--------------------TLFIIDVAQSVEH  214 (351)
Q Consensus       156 L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g--------------------~l~IIDFG~Av~~  214 (351)
                      +....++..+++.++.||+.+|.+||+.+|||||||||.|||+. ++                    .++|+|||.|...
T Consensus       153 ~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~  232 (336)
T 2vuw_A          153 MRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE  232 (336)
T ss_dssp             GTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence            66667899999999999999999999338999999999999995 44                    8999999999754

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.84  E-value=1.3e-20  Score=176.18  Aligned_cols=167  Identities=15%  Similarity=0.122  Sum_probs=107.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccc-cccccccccCC-ChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNG-EFRFRHGYCKK-NPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~g-e~Rfr~~~~k~-n~r~~vk~~ae  114 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++........  .+... ..+........ ...........
T Consensus        15 y~~~~~lG~G~~g~Vy~a~~~~~--------~~~vavK~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (298)
T 2zv2_A           15 YTLKDEIGKGSYGVVKLAYNEND--------NTYYAMKVLSKKKLIRQA--GFPRRPPPRGTRPAPGGCIQPRGPIEQVY   84 (298)
T ss_dssp             EEEEEEEEC--CCEEEEEEETTT--------TEEEEEEEEECC---------------------------------CHHH
T ss_pred             eEEEeEEeecCCEEEEEEEECCC--------CcEEEEEEeehhhhhhhc--ccccccccccccccccccccccchHHHHH
Confidence            89999999999999999998666        899999999864321110  00000 00000000000 00000112245


Q ss_pred             HHHHHHHHhhhCCC-Cccccccc---cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +|+..|.+|.+.+| .+...+..   ...+|||||+. .|.....+....++..++..++.||+.+|.+|| ..||||||
T Consensus        85 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~D  162 (298)
T 2zv2_A           85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVN-QGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLH-YQKIIHRD  162 (298)
T ss_dssp             HHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCT-TCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCC
T ss_pred             HHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCC-CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccC
Confidence            79999999977653 22222221   23589999995 333333334456899999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~  188 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFK  188 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CCHHHEEECCCCCEEEecCCCccccc
Confidence            999999995 6899999999997653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.84  E-value=1.3e-20  Score=184.30  Aligned_cols=148  Identities=16%  Similarity=0.096  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.....   .....++.||||+++.....                         .......+|
T Consensus        66 ~~l~~~LG~G~fG~Vy~a~~~~~---~~~~~~k~VAvK~l~~~~~~-------------------------~~~~~~~~E  117 (353)
T 4ase_A           66 LKLGKPLGRGAFGQVIEADAFGI---DKTATCRTVAVKMLKEGATH-------------------------SEHRALMSE  117 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEEETS---SSTTCEEEEEEEEECTTCCH-------------------------HHHHHHHHH
T ss_pred             eEEeeEEecCCCeEEEEEEEcCC---CcccCCeEEEEEEEccccCh-------------------------HHHHHHHHH
Confidence            88999999999999999986332   00111468999998753210                         001223579


Q ss_pred             HHHHHHhhh-CCC-Cccccccc--cceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYS-EGL-NVPKPILL--KSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECVV  175 (351)
Q Consensus       117 ~~nL~rL~~-~gi-~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll~  175 (351)
                      +.+|.+|.+ .+| ..-..+..  ...+|||||+. .|.+...|+.                 ..++..++..++.||+.
T Consensus       118 ~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~-~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~  196 (353)
T 4ase_A          118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK-FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK  196 (353)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCT-TEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCC-CCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHH
Confidence            999999955 332 22222211  23589999996 5554443421                 23788889999999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.+|| ..+||||||||.|||++ ++.++|+|||+|...
T Consensus       197 gl~yLH-~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~  235 (353)
T 4ase_A          197 GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDI  235 (353)
T ss_dssp             HHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             HHHhHh-hCCeecCccCccceeeCCCCCEEECcchhhhhc
Confidence            999999 59999999999999995 689999999999754

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.83  E-value=2.4e-20  Score=175.46  Aligned_cols=151  Identities=17%  Similarity=0.202  Sum_probs=114.7

Q ss_pred             HHHHHHhcCc---eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccC
Q psy10135         26 ILFKLISRGM---VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCK  102 (351)
Q Consensus        26 ~L~~l~~~g~---~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k  102 (351)
                      .|...+..|-   -|++.+.||+|+||.||+|.+..+        |+.||||++......                    
T Consensus         8 ~l~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~--------------------   59 (297)
T 3fxz_A            8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVAT--------GQEVAIRQMNLQQQP--------------------   59 (297)
T ss_dssp             HHHHHSBSSCGGGTBCCCEEEEEETTEEEEEEEBTTT--------CCEEEEEEEEGGGCS--------------------
T ss_pred             hhhcccCcCChhhceeeeeeeccCCCeEEEEEEECCC--------CcEEEEEEeeccccc--------------------
Confidence            3444444444   399999999999999999998666        999999998642110                    


Q ss_pred             CChhHHHHHHHHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHH
Q psy10135        103 KNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       103 ~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~  178 (351)
                       .     .....+|+..|.++.+.+|  +..+.    ....+|||||+. +|.....+....++..++..++.||+.+|.
T Consensus        60 -~-----~~~~~~E~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~  130 (297)
T 3fxz_A           60 -K-----KELIINEILVMRENKNPNI--VNYLDSYLVGDELWVVMEYLA-GGSLTDVVTETCMDEGQIAAVCRECLQALE  130 (297)
T ss_dssp             -C-----HHHHHHHHHHHHHCCCTTB--CCEEEEEEETTEEEEEEECCT-TCBHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             -H-----HHHHHHHHHHHhcCCCCCC--CeEeEEEEECCEEEEEEECCC-CCCHHHHHhhcCCCHHHHHHHHHHHHHHHH
Confidence             0     1123568888998877653  23332    244689999995 444444455567899999999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|| ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       131 ~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A          131 FLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             HHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHH-hCCceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            999 58999999999999995 689999999998654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.83  E-value=2e-20  Score=179.70  Aligned_cols=142  Identities=24%  Similarity=0.229  Sum_probs=109.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||++......                      +..  .....+|
T Consensus        17 y~~~~~lG~G~~g~V~~a~~~~~--------~~~vaiK~~~~~~~~----------------------~~~--~~~~~~E   64 (328)
T 3fe3_A           17 YRLLKTIGKGNFAKVKLARHILT--------GREVAIKIIDKTQLN----------------------PTS--LQKLFRE   64 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEGGGSC----------------------HHH--HHHHHHH
T ss_pred             EEEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEhhcCC----------------------HHH--HHHHHHH
Confidence            99999999999999999998667        999999998753210                      001  1123478


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|+.+.+.+|  +..+..    ...+|||||+. +|.....+. ...++..++..++.||+.+|.+|| .+|||||||
T Consensus        65 ~~~l~~l~hpnI--v~l~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH-~~~ivHrDl  140 (328)
T 3fe3_A           65 VRIMKILNHPNI--VKLFEVIETEKTLYLIMEYAS-GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH-QKRIVHRDL  140 (328)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEECSSEEEEEECCCT-TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhCCCCCE--eeEEEEEEECCEEEEEEECCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCEeccCC
Confidence            999999987663  223321    45689999995 344433333 356899999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||.|...
T Consensus       141 kp~NIll~~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A          141 KAENLLLDADMNIKIADFGFSNEF  164 (328)
T ss_dssp             CGGGEEECTTSCEEECSTTCCGGG
T ss_pred             CHHHEEEcCCCCEEEeeccCceec
Confidence            99999995 689999999999654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.83  E-value=2e-20  Score=174.34  Aligned_cols=144  Identities=15%  Similarity=0.084  Sum_probs=109.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+|
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~------------------------~~~~~~~~E   51 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNRET--------HEIVALKRVRLDDDDE------------------------GVPSSALRE   51 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEESSCSST------------------------THHHHHHHH
T ss_pred             ceeeeEecCCCCeEEEEEEECCC--------CceEEEEeeeccCCcC------------------------CcchHHHHH
Confidence            89999999999999999999666        9999999997532100                        011223468


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.++.+.+|. +-..+.. ...+|||||++  |.....+.  ...++...+..++.||+.+|.+|| ..||||||||
T Consensus        52 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH-~~~ivH~dik  128 (292)
T 3o0g_A           52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD--QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH-SRNVLHRDLK  128 (292)
T ss_dssp             HHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS--EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCS
T ss_pred             HHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC--CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCC
Confidence            9999988766532 2122212 34579999995  54433332  346889999999999999999999 5899999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||++ ++.++|+|||.|...+
T Consensus       129 p~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A          129 PQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHEEEcCCCCEEEeecccceecC
Confidence            9999995 6899999999997543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.83  E-value=4.4e-20  Score=177.01  Aligned_cols=141  Identities=17%  Similarity=0.137  Sum_probs=108.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.+..+        |+.||||+++....                           .......|
T Consensus        37 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~---------------------------~~~~~~~e   81 (360)
T 3llt_A           37 FLVIRKMGDGTFGRVLLCQHIDN--------KKYYAVKVVRNIKK---------------------------YTRSAKIE   81 (360)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECSCHH---------------------------HHHHHHHH
T ss_pred             EEEEEEEcccCCeEEEEEEECCC--------CeEEEEEEeccchh---------------------------hhhhhHHH
Confidence            99999999999999999998666        89999999874210                           11123568


Q ss_pred             HHHHHHhhhCCCCccccccc-------cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL-------KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      ...|.++....+..|..+..       ...+|||||+|  |.....+..   ..++..++..++.||+.+|.+|| .+||
T Consensus        82 ~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~i  158 (360)
T 3llt_A           82 ADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLG--PSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR-KMSL  158 (360)
T ss_dssp             HHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCCC--CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCe
Confidence            88888886444334433322       34579999994  544443433   24888899999999999999999 5999


Q ss_pred             cccCCCCCceEEe--------------------------CCeEEEEEccccccCC
Q psy10135        187 VHADLSEYNMLVH--------------------------KATLFIIDVAQSVEHD  215 (351)
Q Consensus       187 VH~DLkp~NILi~--------------------------~g~l~IIDFG~Av~~~  215 (351)
                      |||||||.|||+.                          ++.++|+|||.|....
T Consensus       159 vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  213 (360)
T 3llt_A          159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS  213 (360)
T ss_dssp             ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred             eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence            9999999999995                          5789999999997543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.83  E-value=5.2e-20  Score=176.37  Aligned_cols=146  Identities=14%  Similarity=0.154  Sum_probs=111.2

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      .|-.|++.+.||+|+||.||+|.+ .+        ++.||||+++......                        .....
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~--------~~~vavK~~~~~~~~~------------------------~~~~~   53 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EK--------KQIYAIKYVNLEEADN------------------------QTLDS   53 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TT--------SCEEEEEEEECTTCCH------------------------HHHHH
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CC--------CCEEEEEEeeccccch------------------------HHHHH
Confidence            355699999999999999999998 66        8999999987532100                        11122


Q ss_pred             HHHHHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        113 AEKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      ..+|+..|.+|.+..-.++..+..    ...+||||+.  +|.....+.. ..++..++..++.||+.+|.+|| ..|||
T Consensus        54 ~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ii  130 (343)
T 3dbq_A           54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG--NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-QHGIV  130 (343)
T ss_dssp             HHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC--SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCee
Confidence            457999999997532223333332    3457999976  4544444433 45888899999999999999999 59999


Q ss_pred             ccCCCCCceEEeCCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVHKATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+.++.++|+|||.|...
T Consensus       131 HrDikp~NIll~~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A          131 HSDLKPANFLIVDGMLKLIDFGIANQM  157 (343)
T ss_dssp             CCCCCGGGEEEETTEEEECCCSSSCCC
T ss_pred             cCCCCcceEEEECCcEEEeeccccccc
Confidence            999999999999999999999999654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.83  E-value=1.8e-20  Score=186.16  Aligned_cols=146  Identities=16%  Similarity=0.140  Sum_probs=110.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++.....-....                       .....
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~--------~~~~AiK~~~k~~~~~~~~~-----------------------~~~~~  118 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKST--------RKVYAMKLLSKFEMIKRSDS-----------------------AFFWE  118 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHHTCCC-----------------------STHHH
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCC--------CcEEEEEEEehhhhhhhHHH-----------------------HHHHH
Confidence            499999999999999999999666        89999999975221111000                       01235


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |...|..+.+.+|. +-..+.. ...+|||||+. +|.....+....++...++.++.||+.+|.+|| ..|||||||||
T Consensus       119 E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~-gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH-~~givHrDLKp  196 (410)
T 3v8s_A          119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP-GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH-SMGFIHRDVKP  196 (410)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT-TEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC-CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCH
Confidence            77888888766532 1112222 34579999995 455555556667899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ +|.++|+|||.|...
T Consensus       197 ~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          197 DNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             GGEEECTTSCEEECCCTTCEEC
T ss_pred             HHeeECCCCCEEEeccceeEee
Confidence            999994 689999999999654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.83  E-value=3.9e-20  Score=175.14  Aligned_cols=143  Identities=16%  Similarity=0.156  Sum_probs=107.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+ .+        |+.||||+++.....                        ........+|
T Consensus        23 y~~~~~lG~G~~g~V~~~~~-~~--------~~~vavK~~~~~~~~------------------------~~~~~~~~~E   69 (311)
T 3niz_A           23 YQKLEKVGEGTYGVVYKAKD-SQ--------GRIVALKRIRLDAED------------------------EGIPSTAIRE   69 (311)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TT--------SCEEEEEEEC------------------------------CHHHHHHHH
T ss_pred             hHhhhhccCCCCeEEEEEEE-CC--------CCEEEEEEEeccccc------------------------chhhHHHHHH
Confidence            99999999999999999998 66        899999998753110                        0011223579


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.+|. +-..+.. ...+|||||++  |.....+..  ..++..++..++.||+.+|.+|| ..||||||||
T Consensus        70 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~Dik  146 (311)
T 3niz_A           70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFME--KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDLK  146 (311)
T ss_dssp             HHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS--EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCC
T ss_pred             HHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC--CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCc
Confidence            9999999776532 2112212 34589999995  544333333  34888999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+. ++.++|+|||.|...+
T Consensus       147 p~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A          147 PQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             GGGEEECTTCCEEECCCTTCEETT
T ss_pred             hHhEEECCCCCEEEccCcCceecC
Confidence            9999995 6899999999997654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.82  E-value=3.9e-20  Score=173.75  Aligned_cols=143  Identities=15%  Similarity=0.151  Sum_probs=104.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||+|+||.||+|.+..+        |+.||||+++.....                         .......+|
T Consensus         8 y~~~~~lG~G~~g~V~~a~~~~~--------~~~vavK~~~~~~~~-------------------------~~~~~~~~E   54 (332)
T 3qd2_B            8 FEPIQCMGRGGFGVVFEAKNKVD--------DCNYAIKRIRLPNRE-------------------------LAREKVMRE   54 (332)
T ss_dssp             EEEEEEEECC-CSEEEEEEETTT--------CCEEEEEEEECCSTT-------------------------THHHHHHHH
T ss_pred             CceeeEecCCCCeEEEEEEEcCC--------CcEEEEEEeecCCch-------------------------hHHHHHHHH
Confidence            89999999999999999999667        999999999753210                         011223578


Q ss_pred             HHHHHHhhhCCCCccccccc------------------------------------------------------------
Q psy10135        117 MRNLTRMYSEGLNVPKPILL------------------------------------------------------------  136 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~------------------------------------------------------------  136 (351)
                      +..|.+|.+.+|.  +.+..                                                            
T Consensus        55 ~~~l~~l~hpniv--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (332)
T 3qd2_B           55 VKALAKLEHPGIV--RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP  132 (332)
T ss_dssp             HHHHTSCCCTTBC--CEEEEEEECCSCHHHHHHHC--------------------------------------------C
T ss_pred             HHHHHhCCCCCEe--eEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCC
Confidence            8888888766532  11110                                                            


Q ss_pred             -cceEEEEcccCcccccccccccC----CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccc
Q psy10135        137 -KSHVLLMTFIGEDGWPAAKLKDT----PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQ  210 (351)
Q Consensus       137 -~~~vLVMEfig~~G~~~~~L~~~----~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~  210 (351)
                       ...+|||||+. .|.....+...    ..+...+..++.||+.+|.+|| .+|||||||||.|||+. ++.++|+|||.
T Consensus       133 ~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~DfG~  210 (332)
T 3qd2_B          133 KVYLYIQMQLCR-KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGL  210 (332)
T ss_dssp             CCEEEEEEECCC-SSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CceEEEEEEecC-CCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHH-hCCeeecCCCcccEEEeCCCCEEEeecCc
Confidence             11579999995 33333333322    2344457889999999999999 59999999999999995 68999999999


Q ss_pred             cccCCC
Q psy10135        211 SVEHDH  216 (351)
Q Consensus       211 Av~~~~  216 (351)
                      |.....
T Consensus       211 a~~~~~  216 (332)
T 3qd2_B          211 VTAMDQ  216 (332)
T ss_dssp             CEECSC
T ss_pred             cccccc
Confidence            976643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.82  E-value=2.7e-20  Score=185.27  Aligned_cols=144  Identities=18%  Similarity=0.161  Sum_probs=101.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||++.......                        .......+|
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~i~~~~~~~------------------------~~~~~~~~E  102 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDKLE--------KRVVAIKKILRVFEDL------------------------IDCKRILRE  102 (458)
T ss_dssp             EEECCC-------CEEEEEECC----------CEEEEEEECSTTSSH------------------------HHHHHHHHH
T ss_pred             eEEeeEeeecCCeEEEEEEECCC--------CcEEEEEEechhhcCH------------------------HHHHHHHHH
Confidence            99999999999999999998666        9999999986521100                        111223579


Q ss_pred             HHHHHHhhhCCCC-cccccc------ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL------LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~------~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +.+|.+|.+.+|. +-..+.      ....+|||||++  |.....+.. ..++...++.++.||+.+|.+|| .+||||
T Consensus       103 ~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~iiH  179 (458)
T 3rp9_A          103 IAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD--SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH-SAGILH  179 (458)
T ss_dssp             HHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS--EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH-HTTCBC
T ss_pred             HHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc--cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHH-hCCcCC
Confidence            9999999776532 111111      134689999994  544444443 35899999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||.|||++ ++.++|+|||+|....
T Consensus       180 rDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          180 RDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             CCCChhhEEECCCCCEeecccccchhcc
Confidence            99999999995 6899999999998654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.82  E-value=3.8e-20  Score=179.79  Aligned_cols=144  Identities=17%  Similarity=0.147  Sum_probs=106.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-..                       .......|
T Consensus        25 y~~~~~lG~G~fg~V~~~~~~~~--------~~~~AvK~~~~~~~~~~~-----------------------~~~~~~~E   73 (353)
T 3txo_A           25 FEFIRVLGKGSFGKVMLARVKET--------GDLYAVKVLKKDVILQDD-----------------------DVECTMTE   73 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEHHHHHHHT-----------------------THHHHHHH
T ss_pred             eEEEEEEeeCCCEEEEEEEEcCC--------CCEEEEEEEEHHHhcchh-----------------------HHHHHHHH
Confidence            89999999999999999998666        999999999753211000                       01123467


Q ss_pred             HHHHHHhh-hCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|..+. +.+| .+-..+.. ...+|||||+. +|.....+. ...++...++.++.||+.+|.+|| ..||||||||
T Consensus        74 ~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlk  151 (353)
T 3txo_A           74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN-GGDLMFHIQKSRRFDEARARFYAAEIISALMFLH-DKGIIYRDLK  151 (353)
T ss_dssp             HHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCC
T ss_pred             HHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCC
Confidence            78888773 4332 11111111 34589999995 344443443 246899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ +|.++|+|||+|..
T Consensus       152 p~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A          152 LDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             GGGEEECTTSCEEECCCTTCBC
T ss_pred             HHHEEECCCCCEEEccccceee
Confidence            9999994 68999999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.82  E-value=3.6e-20  Score=178.86  Aligned_cols=144  Identities=19%  Similarity=0.176  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++........                  .     ......|
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~------------------~-----~~~~~~E   55 (337)
T 1o6l_A            7 FDYLKLLGKGTFGKVILVREKAT--------GRYYAMKILRKEVIIAKD------------------E-----VAHTVTE   55 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHHTT------------------C-----HHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEEeHHHhhhhh------------------H-----HHHHHHH
Confidence            89999999999999999998666        999999999753211000                  0     1123468


Q ss_pred             HHHHHHhhhCCCCc-cccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNV-PKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~v-P~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|..+.+.+|.. -..+.. ...+|||||+. +|.....+. ...++...++.++.||+.+|.+|| .+|||||||||
T Consensus        56 ~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp  133 (337)
T 1o6l_A           56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN-GGELFFHLSRERVFTEERARFYGAEIVSALEYLH-SRDVVYRDIKL  133 (337)
T ss_dssp             HHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCG
T ss_pred             HHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCcCCH
Confidence            88888887655321 111211 44689999995 344433343 246888999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEcccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .|||++ +|.++|+|||.|..
T Consensus       134 ~NIll~~~g~vkL~DFG~a~~  154 (337)
T 1o6l_A          134 ENLMLDKDGHIKITDFGLCKE  154 (337)
T ss_dssp             GGEEECTTSCEEECCCTTCBC
T ss_pred             HHEEECCCCCEEEeeccchhh
Confidence            999995 68999999999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.82  E-value=7.1e-20  Score=171.80  Aligned_cols=143  Identities=18%  Similarity=0.196  Sum_probs=109.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||++......                       .........+|
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~-----------------------~~~~~~~~~~e   61 (294)
T 4eqm_A           13 YKIVDKLGGGGMSTVYLAEDTIL--------NIKVAIKAIFIPPRE-----------------------KEETLKRFERE   61 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CSEEEEEEEECCSSC-----------------------CHHHHHHHHHH
T ss_pred             EEEEEEEccCCCEEEEEEEECCC--------CCeEEEEEeccCccc-----------------------cHHHHHHHHHH
Confidence            99999999999999999998666        999999998653210                       00112234578


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.+|  +..+..    ...++||||+. +|.....+. ..+++..++..++.||+.+|.+|| .+|||||||
T Consensus        62 ~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~Dl  137 (294)
T 4eqm_A           62 VHNSSQLSHQNI--VSMIDVDEEDDCYYLVMEYIE-GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH-DMRIVHRDI  137 (294)
T ss_dssp             HHHHTTCCBTTB--CCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCC
T ss_pred             HHHHhcCCCCCC--ceEEEeeeeCCeEEEEEeCCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCC
Confidence            899998877653  233322    34579999994 233333333 246889999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.|...
T Consensus       138 kp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A          138 KPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             CGGGEEECTTSCEEECCCSSSTTC
T ss_pred             CHHHEEECCCCCEEEEeCCCcccc
Confidence            99999994 689999999999754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.1e-19  Score=173.53  Aligned_cols=142  Identities=15%  Similarity=0.143  Sum_probs=110.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||+|+++....                           ......+
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~--------~~~~a~K~~~~~~~---------------------------~~~~~~~   50 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSS--------KKTYMAKFVKVKGT---------------------------DQVLVKK   50 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECCCTH---------------------------HHHHHHH
T ss_pred             ceEeeeEEecCCCeEEEEEEECCC--------CcEEEEEEEecCcc---------------------------cHHHHHH
Confidence            389999999999999999998666        89999999874210                           0112457


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.++.+.+|. +-..+.. ...+|||||+. +|.....+..  ..++..++..++.||+.+|.+|| ..|||||||
T Consensus        51 E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-~~givH~Dl  128 (321)
T 1tki_A           51 EISILNIARHRNILHLHESFESMEELVMIFEFIS-GLDIFERINTSAFELNEREIVSYVHQVCEALQFLH-SHNIGHFDI  128 (321)
T ss_dssp             HHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC-CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCcCCC
Confidence            89999999776532 2122222 45689999995 3444444443  35889999999999999999999 599999999


Q ss_pred             CCCceEEe---CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH---KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~---~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+.   ++.++|+|||.|...
T Consensus       129 kp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A          129 RPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             CGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             CHHHEEEccCCCCCEEEEECCCCeEC
Confidence            99999995   578999999999765

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=3.1e-20  Score=180.82  Aligned_cols=143  Identities=15%  Similarity=0.132  Sum_probs=101.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||++.......                        .......+|
T Consensus        11 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~i~~~~~~~------------------------~~~~~~~~E   58 (388)
T 3oz6_A           11 YELVKKLGKGAYGIVWKSIDRRT--------GEVVAVKKIFDAFQNS------------------------TDAQRTFRE   58 (388)
T ss_dssp             EEEEEC-------CEEEEEETTT--------CCEEEEEEECC--CCH------------------------HHHHHHHHH
T ss_pred             eEEEEEeeeCCCeEEEEEEECCC--------CCEEEEEEecccccCh------------------------HHHHHHHHH
Confidence            89999999999999999998667        9999999886421100                        111223468


Q ss_pred             HHHHHHhh-hCCC-Cccccccc---cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMY-SEGL-NVPKPILL---KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi~~---~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++. +.+| .+-..+..   ...+|||||++  |.....+....++...+..++.||+.+|.+|| ..|||||||
T Consensus        59 ~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivHrDl  135 (388)
T 3oz6_A           59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME--TDLHAVIRANILEPVHKQYVVYQLIKVIKYLH-SGGLLHRDM  135 (388)
T ss_dssp             HHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS--EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC--cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCC
Confidence            89999886 5543 22222211   24589999995  55444555567888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||+|...
T Consensus       136 kp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A          136 KPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEES
T ss_pred             CHHHeEEcCCCCEEecCCcccccc
Confidence            99999995 689999999999754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.81  E-value=4.5e-20  Score=178.25  Aligned_cols=144  Identities=17%  Similarity=0.229  Sum_probs=109.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++........                       ......+|
T Consensus        11 Y~i~~~lG~G~~g~V~~a~~~~~--------~~~vaiK~~~~~~~~~~~-----------------------~~~~~~~E   59 (336)
T 3h4j_B           11 YIIRETLGEGSFGKVKLATHYKT--------QQKVALKFISRQLLKKSD-----------------------MHMRVERE   59 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEHHHHHHTT-----------------------CSHHHHHH
T ss_pred             EEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEEehHHccchh-----------------------HHHHHHHH
Confidence            99999999999999999998666        999999998753211000                       01123578


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|+.+.+.+|. +-..+.. ...+|||||++  |.....+. ...++..++..++.||+.+|.+|| ..|||||||||
T Consensus        60 ~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~--g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp  136 (336)
T 3h4j_B           60 ISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG--GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH-RHKIVHRDLKP  136 (336)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC--EEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HHTCCCCCCST
T ss_pred             HHHHHhCCCCCCCeEEEEEEeCCEEEEEEECCC--CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCch
Confidence            8999988776532 1112222 34589999994  65544443 356899999999999999999999 58999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||.|...
T Consensus       137 ~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B          137 ENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             TTEEECTTCCEEECCSSCTBTT
T ss_pred             hhEEEcCCCCEEEEEeccceec
Confidence            999996 579999999998654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.81  E-value=6.7e-20  Score=181.94  Aligned_cols=145  Identities=17%  Similarity=0.137  Sum_probs=110.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~--------~~~vAiK~~~~~~~~~------------------------~~~~~~~~   74 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNT--------EKNVAIKKVNRMFEDL------------------------IDCKRILR   74 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT--------TEEEEEEEECSTTTSH------------------------HHHHHHHH
T ss_pred             CEEEEEEEeecCCEEEEEEEECCC--------CcEEEEEEeCchhcCh------------------------HHHHHHHH
Confidence            399999999999999999999666        8999999987521100                        11122457


Q ss_pred             HHHHHHHhhhCCCC-ccccccc------cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL------KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~------~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|.+|.+.+|. +-..+..      ...+|||||++  |.....+.. ..++...+..++.||+.+|.+|| .+|||
T Consensus        75 E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~giv  151 (432)
T 3n9x_A           75 EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD--SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH-ESGII  151 (432)
T ss_dssp             HHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS--EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH-HTTEE
T ss_pred             HHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC--cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCC
Confidence            99999999776532 2111111      34689999995  544444443 35899999999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||||.|||+. ++.++|+|||+|....
T Consensus       152 HrDlkp~NILl~~~~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          152 HRDLKPANCLLNQDCSVKVCDFGLARTIN  180 (432)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred             CCCCCHHHeEECCCCCEEEccCCCccccc
Confidence            999999999995 5799999999997654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.81  E-value=4.6e-20  Score=171.82  Aligned_cols=141  Identities=18%  Similarity=0.128  Sum_probs=107.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+ .+        |+.||||+++.......           .             .....+|
T Consensus         4 y~~~~~lg~G~~g~V~~~~~-~~--------~~~~aiK~~~~~~~~~~-----------~-------------~~~~~~E   50 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQN-NY--------GETFALKKIRLEKEDEG-----------I-------------PSTTIRE   50 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TT--------SCEEEEEEECCSSGGGC-----------C-------------CHHHHHH
T ss_pred             chhhhhcccCCCEEEEEEEc-CC--------CCEEEEEEEeccccccc-----------c-------------chhHHHH
Confidence            89999999999999999998 66        89999999875321100           0             0112468


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  ++.+..    ...+|||||++  |.....+.  ...++...+..++.||+.+|.+|| ..||||||
T Consensus        51 ~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~d  125 (288)
T 1ob3_A           51 ISILKELKHSNI--VKLYDVIHTKKRLVLVFEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH-DRRVLHRD  125 (288)
T ss_dssp             HHGGGGCCCTTB--CCEEEEEECSSCEEEEEECCS--EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSC
T ss_pred             HHHHHhcCCCCE--eeeeeEEccCCeEEEEEEecC--CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HCCeecCC
Confidence            888988876653  223321    45689999995  53333333  246888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       126 lkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A          126 LKPQNLLINREGELKIADFGLARAFG  151 (288)
T ss_dssp             CCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             CCHHHEEEcCCCCEEEeECccccccC
Confidence            999999995 6899999999986543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=170.21  Aligned_cols=141  Identities=14%  Similarity=0.088  Sum_probs=109.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||++.....                          .......+|
T Consensus        12 ~~~~~~lG~G~~g~V~~~~~~~~--------~~~va~K~~~~~~~--------------------------~~~~~~~~E   57 (310)
T 3s95_A           12 LIHGEVLGKGCFGQAIKVTHRET--------GEVMVMKELIRFDE--------------------------ETQRTFLKE   57 (310)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTT--------CCEEEEEEESCCCH--------------------------HHHHHHHHH
T ss_pred             eeccceecCCCCEEEEEEEECCC--------CcEEEEEEeccCCH--------------------------HHHHHHHHH
Confidence            88999999999999999999666        99999998754211                          111224578


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  +..+..    ...++||||+. .|.....+..  ..++..++..++.||+.+|.+|| ..||||||
T Consensus        58 ~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~d  133 (310)
T 3s95_A           58 VKVMRCLEHPNV--LKFIGVLYKDKRLNFITEYIK-GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH-SMNIIHRD  133 (310)
T ss_dssp             HHHHTTCCCTTB--CCEEEEEEETTEEEEEEECCT-TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHhCCCcCc--ccEEEEEecCCeeEEEEEecC-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCC
Confidence            999999876653  233322    44679999995 3444333433  45888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       134 lkp~Nil~~~~~~~kl~Dfg~~~~~~  159 (310)
T 3s95_A          134 LNSHNCLVRENKNVVVADFGLARLMV  159 (310)
T ss_dssp             CSTTSEEECTTSCEEECCCTTCEECC
T ss_pred             CCcCeEEECCCCCEEEeecccceecc
Confidence            999999995 5789999999997653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.81  E-value=7.5e-20  Score=183.29  Aligned_cols=146  Identities=19%  Similarity=0.172  Sum_probs=108.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.++||+|+||.||+|....+        |+.||||+++.....-...   .                    .....
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~--------~~~vAvK~~~~~~~~~~~~---~--------------------~~~~~  123 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNA--------DKVFAMKILNKWEMLKRAE---T--------------------ACFRE  123 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEEHHHHHHTTT---T--------------------CCHHH
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCC--------CcEEEEEEEEHHHhhhHHH---H--------------------HHHHH
Confidence            489999999999999999998666        8999999997522110000   0                    00235


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |...|..+.+..|. .-..+.. ...+|||||+. +|.....+..  ..+++..++.++.||+.+|.+|| ..|||||||
T Consensus       124 E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~-gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH-~~giiHrDL  201 (437)
T 4aw2_A          124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV-GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH-QLHYVHRDI  201 (437)
T ss_dssp             HHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT-TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC-CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeccc
Confidence            77778877665432 1111111 34589999995 4555445543  46899999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||+|...
T Consensus       202 Kp~NILl~~~g~vkL~DFGla~~~  225 (437)
T 4aw2_A          202 KPDNILMDMNGHIRLADFGSCLKL  225 (437)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CHHHeeEcCCCCEEEcchhhhhhc
Confidence            99999995 689999999998543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=1.1e-19  Score=170.54  Aligned_cols=148  Identities=18%  Similarity=0.077  Sum_probs=105.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++.........        .        .     .....+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~--------~--------~-----~~~~~~   60 (308)
T 3g33_A           10 RYEPVAEIGVGAYGTVYKARDPHS--------GHFVALKSVRVPNGGGGGG--------G--------L-----PISTVR   60 (308)
T ss_dssp             CCEEEEEECCSSSCCEEEEECTTT--------CCEEEEEEEEEECCCTTSS--------C--------C-----CHHHHH
T ss_pred             ceEEEEEEecCCCeEEEEEEECCC--------CcEEEEEEEeccccccccc--------c--------c-----chhHHH
Confidence            389999999999999999998666        9999999987521100000        0        0     011235


Q ss_pred             HHHHHHHhh---hCCC-Ccccccccc------ceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTRMY---SEGL-NVPKPILLK------SHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~rL~---~~gi-~vP~pi~~~------~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      |+..+.+|.   +.+| .+...+...      ..++||||++  |.....+...   .++..++..++.||+.+|.+|| 
T Consensus        61 e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-  137 (308)
T 3g33_A           61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD--QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH-  137 (308)
T ss_dssp             HHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC--CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh--cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            667777665   4442 221111111      2579999995  5443334332   3889999999999999999999 


Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ..|||||||||.|||+. ++.++|+|||.|....
T Consensus       138 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  171 (308)
T 3g33_A          138 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS  171 (308)
T ss_dssp             HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTST
T ss_pred             HCCcccCCCCHHHEEEcCCCCEEEeeCccccccC
Confidence            59999999999999994 6899999999997543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.81  E-value=1.1e-19  Score=179.84  Aligned_cols=144  Identities=15%  Similarity=0.188  Sum_probs=106.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||+|+||.||+|....+        |+.||||+++.........                       ..+...|
T Consensus        54 y~~~~~LG~G~fG~V~~~~~~~~--------~~~~AvK~~~k~~~~~~~~-----------------------~~~~~~E  102 (396)
T 4dc2_A           54 FDLLRVIGRGSYAKVLLVRLKKT--------DRIYAMRVVKKELVNDDED-----------------------IDWVQTE  102 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEEGGGTC---------------------------CCHHHHH
T ss_pred             cEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEEhhhccCHHH-----------------------HHHHHHH
Confidence            89999999999999999998666        8999999998632111000                       0123457


Q ss_pred             HHHHHHh-hhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++ .+.+| .+-..+.. ...+|||||+. +|.....+. ...++...++.++.||+.+|.+|| .+||||||||
T Consensus       103 ~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~-gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDLK  180 (396)
T 4dc2_A          103 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN-GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH-ERGIIYRDLK  180 (396)
T ss_dssp             HHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCC
T ss_pred             HHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCEEeccCC
Confidence            7778777 34432 11111212 34689999995 444443443 246899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ +|.++|+|||+|..
T Consensus       181 p~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          181 LDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             GGGEEECTTSCEEECCCTTCBC
T ss_pred             HHHEEECCCCCEEEeecceeee
Confidence            9999994 68999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=9.8e-20  Score=177.07  Aligned_cols=145  Identities=21%  Similarity=0.230  Sum_probs=105.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||++.....   .                     ........+
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~--------~~~vaiK~~~~~~~---~---------------------~~~~~~~~~   73 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRT--------GAKVAIKKLYRPFQ---S---------------------ELFAKRAYR   73 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTT--------CCEEEEEECSSTTS---S---------------------HHHHHHHHH
T ss_pred             eEEEeEEeeecCCeEEEEEEECCC--------CCEEEEEEeCcccc---C---------------------HHHHHHHHH
Confidence            499999999999999999998666        99999999864210   0                     011223457


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|++|.+.+| .+...+..       ...+|||||+|  +.....+....++...+..++.||+.+|.+|| .+|||
T Consensus        74 E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH-~~~iv  150 (367)
T 1cm8_A           74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG--TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH-AAGII  150 (367)
T ss_dssp             HHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCS--EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEE
T ss_pred             HHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecCC--CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcc
Confidence            9999999977653 22222221       23489999994  44434444567899999999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||||.|||++ ++.++|+|||.|...+
T Consensus       151 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          151 HRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            999999999995 6899999999997654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.81  E-value=7.4e-20  Score=184.04  Aligned_cols=142  Identities=16%  Similarity=0.181  Sum_probs=106.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++....   .                     ........+|
T Consensus        64 y~~~~~lG~G~~g~V~~a~~~~~--------~~~vAiK~~~~~~~---~---------------------~~~~~~~~~E  111 (464)
T 3ttj_A           64 YQNLKPIGSGAQGIVCAAYDAVL--------DRNVAIKKLSRPFQ---N---------------------QTHAKRAYRE  111 (464)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------TEEEEEEEEESGGG---S---------------------HHHHHHHHHH
T ss_pred             eEEEEEeecCCCeEEEEEEECCC--------CCEEEEEEECcccc---C---------------------hHHHHHHHHH
Confidence            88899999999999999998666        99999999875311   0                     0111234578


Q ss_pred             HHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|+.+.+.+| .+...+..       ...+|||||++  |.....+ ...++..++..++.||+.+|.+|| ..||||
T Consensus       112 ~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~--~~l~~~~-~~~l~~~~~~~~~~qil~aL~~lH-~~~iiH  187 (464)
T 3ttj_A          112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD--ANLCQVI-QMELDHERMSYLLYQMLCGIKHLH-SAGIIH  187 (464)
T ss_dssp             HHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCS--EEHHHHH-TSCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCC--CCHHHHH-hhcCCHHHHHHHHHHHHHHHHHHH-HCCccc
Confidence            999999977653 22222211       23489999995  4333333 335888899999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||++ ++.++|+|||.|...
T Consensus       188 rDlkp~NIll~~~~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          188 RDLKPSNIVVKSDCTLKILDFGLARTA  214 (464)
T ss_dssp             CCCCGGGEEECTTSCEEECCCCCC---
T ss_pred             CCCChHhEEEeCCCCEEEEEEEeeeec
Confidence            99999999995 689999999999754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.81  E-value=1.1e-19  Score=175.71  Aligned_cols=144  Identities=15%  Similarity=0.170  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-                       .........|
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~--------~~~~aiK~~~~~~~~~-----------------------~~~~~~~~~E   59 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKT--------DRIYAMKVVKKELVND-----------------------DEDIDWVQTE   59 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEEGGGSCS-----------------------HHHHHHHHHH
T ss_pred             eEEEEEEEecCCeEEEEEEECCC--------CCEEEEEEEEhHHhcc-----------------------hHHHHHHHHH
Confidence            89999999999999999998666        8999999997632100                       0111234568


Q ss_pred             HHHHHHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|.++ .+.+| .+-..+.. ...+|||||+. +|.....+.. ..++...++.++.||+.+|.+|| .+||||||||
T Consensus        60 ~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlk  137 (345)
T 3a8x_A           60 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN-GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH-ERGIIYRDLK  137 (345)
T ss_dssp             HHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCC
T ss_pred             HHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCC
Confidence            8888877 44442 21111211 44689999995 3444333432 46889999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ +|.++|+|||.|..
T Consensus       138 p~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A          138 LDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             GGGEEECTTSCEEECCGGGCBC
T ss_pred             HHHEEECCCCCEEEEecccccc
Confidence            9999994 68999999999975

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.81  E-value=1.4e-19  Score=172.65  Aligned_cols=141  Identities=18%  Similarity=0.183  Sum_probs=107.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||++......  .                       ......+
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~--~-----------------------~~~~~~~   54 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVT--------EEAVAVKIVDMKRAV--D-----------------------CPENIKK   54 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECC--------------------------------CHHH
T ss_pred             hceeeeEEecCCCEEEEEEEECCC--------CcEEEEEEEEccccc--c-----------------------hHHHHHH
Confidence            389999999999999999998666        999999998753210  0                       0011246


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..++.+.+.+|  ++.+..    ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+||||||
T Consensus        55 E~~~l~~l~hpnI--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH-~~givH~D  130 (323)
T 3tki_A           55 EICINKMLNHENV--VKFYGHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRD  130 (323)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEECSSEEEEEEECCT-TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHhCCCCCC--CeEEEEEecCCeEEEEEEcCC-CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccc
Confidence            8888998877653  223322    34579999995 3444444443 35889999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEcccccc
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |||.|||+. ++.++|+|||.|..
T Consensus       131 lkp~NIll~~~~~~kl~Dfg~a~~  154 (323)
T 3tki_A          131 IKPENLLLDERDNLKISDFGLATV  154 (323)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cchHHEEEeCCCCEEEEEeeccce
Confidence            999999995 58999999999964

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.81  E-value=1.1e-19  Score=178.41  Aligned_cols=145  Identities=14%  Similarity=0.148  Sum_probs=108.6

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      |..|.+.+.||+|+||.||+|.+ .+        |+.||||+++......                        ......
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~-~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~  101 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLN-EK--------KQIYAIKYVNLEEADN------------------------QTLDSY  101 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEC-TT--------CCEEEEEEEECTTCCH------------------------HHHHHH
T ss_pred             CCceEEEEEEccCCCeEEEEEEc-CC--------CCEEEEEEEecccccH------------------------HHHHHH
Confidence            33599999999999999999998 55        8999999987632110                        011223


Q ss_pred             HHHHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      .+|+..|.+|.+..-.+...+..    ...+||||+.  +|.....+.. ..++..++..++.||+.+|.+|| .+||||
T Consensus       102 ~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH-~~~ivH  178 (390)
T 2zmd_A          102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG--NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-QHGIVH  178 (390)
T ss_dssp             HHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC--SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH-TTTCCC
T ss_pred             HHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeee
Confidence            57999999996421123333322    3458999965  4544333433 35788889999999999999999 599999


Q ss_pred             cCCCCCceEEeCCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVHKATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+.++.++|+|||+|...
T Consensus       179 rDlkp~NIll~~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          179 SDLKPANFLIVDGMLKLIDFGIANQM  204 (390)
T ss_dssp             CCCCGGGEEESSSCEEECCCSSSCCC
T ss_pred             cCCCHHHEEEECCeEEEEecCccccc
Confidence            99999999998899999999999754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.81  E-value=8.5e-20  Score=181.48  Aligned_cols=146  Identities=16%  Similarity=0.112  Sum_probs=108.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.++||+|+||.||+|....+        |+.||||+++.........   +                    .....
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~--------~~~vAiK~l~k~~~~~~~~---~--------------------~~~~~  110 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQT--------GQVYAMKIMNKWDMLKRGE---V--------------------SCFRE  110 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHHHGG---G--------------------CCHHH
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEeHHHhhhHHH---H--------------------HHHHH
Confidence            499999999999999999998666        9999999997532111100   0                    01235


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |...|..+.+..|. +-..+.. ...+|||||+. +|.....+..  ..++...++.++.||+.+|.+|| .+|||||||
T Consensus       111 E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~-gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~giiHrDL  188 (412)
T 2vd5_A          111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV-GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH-RLGYVHRDI  188 (412)
T ss_dssp             HHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccc
Confidence            77778777665432 1111222 34589999995 4544444443  36888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ +|.++|+|||.|...
T Consensus       189 Kp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          189 KPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CHHHeeecCCCCEEEeechhheec
Confidence            99999995 589999999998654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.81  E-value=6.8e-20  Score=175.24  Aligned_cols=145  Identities=17%  Similarity=0.134  Sum_probs=108.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-..                      . ......|
T Consensus         8 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~----------------------~-~~~~~~E   56 (318)
T 1fot_A            8 FQILRTLGTGSFGRVHLIRSRHN--------GRYYAMKVLKKEIVVRLK----------------------Q-VEHTNDE   56 (318)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHHTT----------------------C-HHHHHHH
T ss_pred             cEEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhhhhh----------------------H-HHHHHHH
Confidence            89999999999999999998666        999999999753211000                      0 0113457


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|..+.+.+| .+-..+.. ...+|||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        57 ~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp  134 (318)
T 1fot_A           57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE-GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH-SKDIIYRDLKP  134 (318)
T ss_dssp             HHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCG
T ss_pred             HHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCh
Confidence            788888866553 21111211 34579999995 3444444433 45888899999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ +|.++|+|||.|...
T Consensus       135 ~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A          135 ENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             GGEEECTTSCEEECCCSSCEEC
T ss_pred             heEEEcCCCCEEEeecCcceec
Confidence            999995 689999999999754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.81  E-value=2.1e-19  Score=174.47  Aligned_cols=151  Identities=19%  Similarity=0.192  Sum_probs=111.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        |+.||||+++.........                  ..........+|
T Consensus        96 y~~~~~lg~G~~g~Vy~a~~~~~--------g~~vavK~~~~~~~~~~~~------------------~~~~~~~~~~~E  149 (365)
T 2y7j_A           96 YDPKDVIGRGVSSVVRRCVHRAT--------GHEFAVKIMEVTAERLSPE------------------QLEEVREATRRE  149 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEETTSSCCCHH------------------HHHHHHHHHHHH
T ss_pred             cccceEEecCCCEEEEEEEECCC--------CcEEEEEEEEccccccCHH------------------HHHHHHHHHHHH
Confidence            88999999999999999998666        9999999998743111000                  011223345679


Q ss_pred             HHHHHHh-hhCCCCcccccc--ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRM-YSEGLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ..+|.++ .+.+|..+..+.  ....+|||||+. +|.....+.. ..++...+..++.||+.+|.+|| ..|++|+|||
T Consensus       150 ~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH-~~gi~H~Dlk  227 (365)
T 2y7j_A          150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMR-KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH-ANNIVHRDLK  227 (365)
T ss_dssp             HHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCS
T ss_pred             HHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCC
Confidence            9999998 465543332221  244689999995 2333333332 46888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+. ++.++|+|||.+....
T Consensus       228 p~NIl~~~~~~ikl~DfG~~~~~~  251 (365)
T 2y7j_A          228 PENILLDDNMQIRLSDFGFSCHLE  251 (365)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHEEECCCCCEEEEecCcccccC
Confidence            9999995 6899999999987553

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.81  E-value=1.7e-19  Score=168.92  Aligned_cols=142  Identities=17%  Similarity=0.166  Sum_probs=109.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.||||++.....                        .........+|
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~------------------------~~~~~~~~~~E   52 (311)
T 4agu_A            5 YEKIGKIGEGSYGVVFKCRNRDT--------GQIVAIKKFLESED------------------------DPVIKKIALRE   52 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECCCCC-------------------------HHHHHHHHHH
T ss_pred             ceEeeEEeecCCeEEEEEEeCCC--------CcEEEEEEeecccc------------------------chHHHHHHHHH
Confidence            89999999999999999999666        99999999865321                        01112234579


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccc-c-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKL-K-DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L-~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.++.+.+|  +..+..    ...++||||++  |..+..+ . ...++...+..++.|++.+|.+|| ..|+||||
T Consensus        53 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH-~~~ivH~d  127 (311)
T 4agu_A           53 IRMLKQLKHPNL--VNLLEVFRRKRRLHLVFEYCD--HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH-KHNCIHRD  127 (311)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEEETTEEEEEEECCS--EEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCC
T ss_pred             HHHHHhCCCCCc--cchhheeecCCeEEEEEEeCC--CchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH-HCCCcCCC
Confidence            999999987653  233322    34589999995  4333333 2 245888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       128 lkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A          128 VKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             CSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CChhhEEEcCCCCEEEeeCCCchhcc
Confidence            999999995 6899999999997654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.81  E-value=5.6e-20  Score=178.24  Aligned_cols=145  Identities=17%  Similarity=0.139  Sum_probs=108.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-..                      . .....+|
T Consensus        43 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~----------------------~-~~~~~~E   91 (350)
T 1rdq_E           43 FDRIKTLGTGSFGRVMLVKHKES--------GNHYAMKILDKQKVVKLK----------------------Q-IEHTLNE   91 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHHTT----------------------C-HHHHHHH
T ss_pred             CEEEEEeecCcCcEEEEEEECCC--------CCEEEEEEEEhHHhccHH----------------------H-HHHHHHH
Confidence            99999999999999999998666        999999999753211000                      0 0123468


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|.++.+.+|. +-..+. ....+|||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        92 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp  169 (350)
T 1rdq_E           92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA-GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKP  169 (350)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCcc
Confidence            8888888665432 111111 144589999995 3444444433 46899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ +|.++|+|||.|...
T Consensus       170 ~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          170 ENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             GGEEECTTSCEEECCCTTCEEC
T ss_pred             ceEEECCCCCEEEcccccceec
Confidence            999995 689999999999755

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.81  E-value=1.5e-19  Score=175.54  Aligned_cols=144  Identities=19%  Similarity=0.192  Sum_probs=109.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......                      .  .....+|
T Consensus        31 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~----------------------~--~~~~~~E   78 (362)
T 2bdw_A           31 YDVKEELGKGAFSVVRRCVHKTT--------GLEFAAKIINTKKLSAR----------------------D--FQKLERE   78 (362)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEETTTCCHH----------------------H--HHHHHHH
T ss_pred             eEEeeEEecCCCeEEEEEEECCC--------CCEEEEEEEEcccCCHH----------------------H--HHHHHHH
Confidence            99999999999999999998666        99999999976321110                      0  1124579


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.+|.+.+|. +-..+.. ...+|||||+. +|.....+. ...++..++..++.||+.+|.+|| ..|||||||||
T Consensus        79 ~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH-~~~ivH~Dlkp  156 (362)
T 2bdw_A           79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT-GGELFEDIVAREFYSEADASHCIQQILESIAYCH-SNGIVHRNLKP  156 (362)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSG
T ss_pred             HHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCch
Confidence            9999999776532 2112222 44689999995 344434443 345888999999999999999999 59999999999


Q ss_pred             CceEEeC----CeEEEEEccccccC
Q psy10135        194 YNMLVHK----ATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~~----g~l~IIDFG~Av~~  214 (351)
                      .|||+..    +.++|+|||.|...
T Consensus       157 ~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          157 ENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             GGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             HHEEEecCCCCCCEEEeecCcceEe
Confidence            9999942    46999999999755

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=8.1e-20  Score=177.07  Aligned_cols=145  Identities=19%  Similarity=0.162  Sum_probs=106.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++.........                       ......
T Consensus        18 ~y~~~~~lG~G~fg~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~-----------------------~~~~~~   66 (345)
T 1xjd_A           18 DFILHKMLGKGSFGKVFLAEFKKT--------NQFFAIKALKKDVVLMDDD-----------------------VECTMV   66 (345)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTT--------TEEEEEEEEEHHHHHHTTC-----------------------HHHHHH
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEEhHHhhhhhh-----------------------HHHHHH
Confidence            389999999999999999999666        9999999997532111100                       011235


Q ss_pred             HHHHHHHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |...|..+ .+.+| .+-..+.. ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| ..|||||||
T Consensus        67 E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDl  144 (345)
T 1xjd_A           67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN-GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH-SKGIVYRDL  144 (345)
T ss_dssp             HHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCC
T ss_pred             HHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCC
Confidence            67777776 44432 11111211 44589999995 3444444433 46889999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||.|||++ +|.++|+|||+|..
T Consensus       145 kp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A          145 KLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             CGGGEEECTTSCEEECCCTTCBC
T ss_pred             ChhhEEECCCCCEEEeEChhhhh
Confidence            99999995 68999999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.81  E-value=1.7e-19  Score=171.91  Aligned_cols=142  Identities=13%  Similarity=0.120  Sum_probs=110.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++....                         ........+
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~-------------------------~~~~~~~~~   58 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPT--------GEIVAIKKIEPFDK-------------------------PLFALRTLR   58 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECCCSS-------------------------HHHHHHHHH
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCC--------CcEEEEEeeccccc-------------------------chHHHHHHH
Confidence            389999999999999999998666        99999999864210                         011122346


Q ss_pred             HHHHHHHhhhCCCCcccccc---------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL---------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~---------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |+..|.+|.+.+|.  ..+.         ....++||||++  |.....+....++...+..++.||+.+|.+|| .+||
T Consensus        59 E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH-~~~i  133 (353)
T 2b9h_A           59 EIKILKHFKHENII--TIFNIQRPDSFENFNEVYIIQELMQ--TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH-GSNV  133 (353)
T ss_dssp             HHHHHHHCCCTTBC--CEEEECCCSCSTTCCCEEEEECCCS--EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHhCcCCCcC--CeeeeecccccCccceEEEEEeccC--ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-HCCe
Confidence            89999999776532  2221         144689999994  54444455567899999999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||||.|||+. ++.++|+|||.|....
T Consensus       134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A          134 IHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            9999999999995 6899999999997553

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.81  E-value=1.8e-19  Score=173.90  Aligned_cols=143  Identities=18%  Similarity=0.147  Sum_probs=111.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++....     .                    .......+
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~-----~--------------------~~~~~~~~   74 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLN--------KVRVAIKKISPFEH-----Q--------------------TYCQRTLR   74 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECCTTC-----H--------------------HHHHHHHH
T ss_pred             cEEEEEEeecCCCeEEEEEEECCC--------CeEEEEEEeccccC-----c--------------------HHHHHHHH
Confidence            499999999999999999998666        89999999875210     0                    01112357


Q ss_pred             HHHHHHHhhhCCCC-ccccccc------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|.+|.+.+|. +...+..      ...++||||++  |.....+....++..++..++.||+.+|.+|| ..||||
T Consensus        75 E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~--~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH  151 (364)
T 3qyz_A           75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME--TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SANVLH  151 (364)
T ss_dssp             HHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS--EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC--cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-HCCeec
Confidence            99999999776642 2222211      34689999995  65555556667999999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.++|+|||.|...
T Consensus       152 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~  178 (364)
T 3qyz_A          152 RDLKPSNLLLNTTCDLKICDFGLARVA  178 (364)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCCChHhEEECCCCCEEEEeCcceEec
Confidence            99999999995 579999999999654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.81  E-value=1.4e-19  Score=181.37  Aligned_cols=145  Identities=17%  Similarity=0.195  Sum_probs=109.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||+|+++.......+                        .....+|
T Consensus        13 Y~i~~~LG~G~fg~V~~~~~~~~--------~~~~a~K~i~~~~~~~~~------------------------~~~~~~E   60 (444)
T 3soa_A           13 YQLFEELGKGAFSVVRRCVKVLA--------GQEYAAMIINTKKLSARD------------------------HQKLERE   60 (444)
T ss_dssp             EEEEEEEEEC--CEEEEEEETTT--------TEEEEEEEEESCSCHHHH------------------------HHHHHHH
T ss_pred             eEEEEEeccCCCeEEEEEEECCC--------CcEEEEEEEEcccCCHHH------------------------HHHHHHH
Confidence            89999999999999999998667        999999999864321111                        1224579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.+|.+.+| .+...+.. ...+|||||+. +|.....+. ...+++.++..++.||+.+|.+|| ..|||||||||
T Consensus        61 ~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~-gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH-~~givHrDlKp  138 (444)
T 3soa_A           61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVT-GGELFEDIVAREYYSEADASHCIQQILEAVLHCH-QMGVVHRNLKP  138 (444)
T ss_dssp             HHHHHHCCBTTBCCEEEEEECSSEEEEEECCCB-CCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSS
T ss_pred             HHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCH
Confidence            999999977663 22222222 44689999995 344434443 346889999999999999999999 59999999999


Q ss_pred             CceEEe----CCeEEEEEccccccCC
Q psy10135        194 YNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      .|||+.    ++.++|+|||.|....
T Consensus       139 ~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A          139 ENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             TTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             HHEEEeccCCCCcEEEccCceeEEec
Confidence            999995    3689999999997553

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.81  E-value=1.7e-19  Score=178.54  Aligned_cols=153  Identities=15%  Similarity=0.156  Sum_probs=112.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||++............                  ........+
T Consensus       136 ~y~~~~~LG~G~~g~V~~a~~~~~--------~~~vavK~~~~~~~~~~~~~~------------------~~~~~~~~~  189 (419)
T 3i6u_A          136 EYIMSKTLGSGACGEVKLAFERKT--------CKKVAIRIISKRKFAIGSARE------------------ADPALNVET  189 (419)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEEGGGGTTC--------------------------CCHHH
T ss_pred             cEEEEeEEeeCCCeEEEEEEECCC--------CcEEEEEEEEechhccccccc------------------chhHHHHHH
Confidence            389999999999999999999666        899999999763221110000                  000111357


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..|.+|.+.+| .+-..+.....+|||||+. .|.....+. ...++..++..++.||+.+|.+|| .+|||||||||
T Consensus       190 E~~~l~~l~hpniv~l~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivHrDlkp  267 (419)
T 3i6u_A          190 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELME-GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH-ENGIIHRDLKP  267 (419)
T ss_dssp             HHHHHHHCCCTTBCCCCEEEESSEEEEEEECCT-TCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCG
T ss_pred             HHHHHHhCCCCCEeeEEEEEecCceEEEEEcCC-CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCh
Confidence            9999999977664 3333333455689999995 444444443 346889999999999999999999 59999999999


Q ss_pred             CceEEeC----CeEEEEEccccccCCC
Q psy10135        194 YNMLVHK----ATLFIIDVAQSVEHDH  216 (351)
Q Consensus       194 ~NILi~~----g~l~IIDFG~Av~~~~  216 (351)
                      .|||+..    ..++|+|||.|...+.
T Consensus       268 ~NIll~~~~~~~~~kl~DFG~a~~~~~  294 (419)
T 3i6u_A          268 ENVLLSSQEEDCLIKITDFGHSKILGE  294 (419)
T ss_dssp             GGEEESSSSSSCCEEECCSSTTTSCC-
T ss_pred             HhEEEecCCCcceEEEeecccceecCC
Confidence            9999942    3599999999976543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.81  E-value=1.8e-19  Score=173.56  Aligned_cols=127  Identities=18%  Similarity=0.166  Sum_probs=95.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                           ......+|
T Consensus        39 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~---------------------------~~~~~~~E   83 (397)
T 1wak_A           39 YHVIRKLGWGHFSTVWLSWDIQG--------KKFVAMKVVKSAEH---------------------------YTETALDE   83 (397)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECSCHH---------------------------HHHHHHHH
T ss_pred             EEEEEEeeecCCeeEEEEEecCC--------CeEEEEEEEecCCc---------------------------chHHHHHH
Confidence            99999999999999999998666        89999999875210                           11123578


Q ss_pred             HHHHHHhhhCCCC------ccccccc--------cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLN------VPKPILL--------KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       117 ~~nL~rL~~~gi~------vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~  179 (351)
                      +..|.+|.+....      +...+..        ...+|||||++  |..+..+..   ..++...+..++.||+.+|.+
T Consensus        84 ~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  161 (397)
T 1wak_A           84 IRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLG--HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY  161 (397)
T ss_dssp             HHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCC--CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccC--ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999754321      2222221        24579999995  544444432   358889999999999999999


Q ss_pred             HHhhCCccccCCCCCceEEeC
Q psy10135        180 LYNKCHLVHADLSEYNMLVHK  200 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~~  200 (351)
                      ||..+|||||||||.|||+..
T Consensus       162 lH~~~givHrDikp~NIll~~  182 (397)
T 1wak_A          162 LHTKCRIIHTDIKPENILLSV  182 (397)
T ss_dssp             HHHTTCEECCCCSGGGEEECC
T ss_pred             HHHhCCEecCCCCHHHeeEec
Confidence            995349999999999999953

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.81  E-value=2.4e-19  Score=166.48  Aligned_cols=138  Identities=15%  Similarity=0.197  Sum_probs=105.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|++|.||+|.+..+        |+.||||+++....    .       ..                 ..+
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~----~-------~~-----------------~~~   54 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLN--------NQQVAIKFEPRRSD----A-------PQ-----------------LRD   54 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTT--------TEEEEEEEEECCTT----S-------CC-----------------HHH
T ss_pred             ceEEEEEEeecCCEEEEEEEECCC--------CcEEEEEEeccCCc----c-------HH-----------------HHH
Confidence            399999999999999999998666        99999999864210    0       00                 245


Q ss_pred             HHHHHHHhh-hCCCCccccccc----cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMY-SEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~-~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..+.+|. +.+  +|..+..    ...+|||||+|  |.....+.  ...++..++..++.||+.+|.+|| .+||||
T Consensus        55 e~~~~~~l~~~~~--i~~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH  129 (298)
T 1csn_A           55 EYRTYKLLAGCTG--IPNVYYFGQEGLHNVLVIDLLG--PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH-EKSLVY  129 (298)
T ss_dssp             HHHHHHHTTTCTT--CCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-TTTEEC
T ss_pred             HHHHHHHHhcCCC--CCeEEeecCCCceeEEEEEecC--CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-hCCEec
Confidence            888888884 333  4444432    34589999994  54444343  235889999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCe-----EEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KAT-----LFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~-----l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.     ++|+|||.|...
T Consensus       130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A          130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             CCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             CCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence            99999999994 344     999999999754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.81  E-value=1.7e-19  Score=170.60  Aligned_cols=152  Identities=16%  Similarity=0.156  Sum_probs=109.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++...........                  ........+
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~~~------------------~~~~~~~~~   64 (322)
T 2ycf_A           11 EYIMSKTLGSGACGEVKLAFERKT--------CKKVAIKIISKRKFAIGSARE------------------ADPALNVET   64 (322)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECC---------------------------------CHHH
T ss_pred             ceeEeeEEecCCCEEEEEEEEcCC--------CcEEEEEEeehhhhhhccccc------------------chhhhhHHH
Confidence            389999999999999999998666        899999999764321110000                  000112357


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+..|.+|.+.+| .+...+.....++||||+. .|.....+. ...++...+..++.||+.+|.+|| .+|||||||||
T Consensus        65 E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp  142 (322)
T 2ycf_A           65 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELME-GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH-ENGIIHRDLKP  142 (322)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEESSSEEEEEECCT-TEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHHhCCCCCCceEeeEEcCCceEEEEecCC-CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCH
Confidence            8999999977653 2222233355789999995 334333333 346888899999999999999999 59999999999


Q ss_pred             CceEEeC-C---eEEEEEccccccCC
Q psy10135        194 YNMLVHK-A---TLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~~-g---~l~IIDFG~Av~~~  215 (351)
                      .|||+.. +   .++|+|||.|....
T Consensus       143 ~NIl~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A          143 ENVLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             GGEEESSSSSSCCEEECCCTTCEECC
T ss_pred             HHEEEecCCCCCeEEEccCccceecc
Confidence            9999953 3   49999999997654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.81  E-value=1e-19  Score=173.00  Aligned_cols=138  Identities=17%  Similarity=0.176  Sum_probs=105.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++....     .      .+                 ..+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~-----~------~~-----------------~~~   53 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYT--------NEYVAIKLEPMKSR-----A------PQ-----------------LHL   53 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTT--------TEEEEEEEEETTCS-----S------CC-----------------HHH
T ss_pred             CeEEEEEeeccCCceEEEEEECCC--------CcEEEEEEeccccc-----h------HH-----------------HHH
Confidence            489999999999999999998666        99999999865210     0      01                 246


Q ss_pred             HHHHHHHh-hhCCCCccccccc----cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|.+| .+.+|  +..+..    ...+|||||+|  |.....+.  ...++...+..++.||+.+|.+|| ..||||
T Consensus        54 E~~~l~~l~~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~iiH  128 (330)
T 2izr_A           54 EYRFYKQLGSGDGI--PQVYYFGPCGKYNAMVLELLG--PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH-SKNLIY  128 (330)
T ss_dssp             HHHHHHHHCSCTTS--CCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHHhhCCCCC--CEEEEEEecCCccEEEEEeCC--CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence            88999999 55553  333322    34589999994  44333333  346899999999999999999999 599999


Q ss_pred             cCCCCCceEEeC-Ce-----EEEEEccccccC
Q psy10135        189 ADLSEYNMLVHK-AT-----LFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~~-g~-----l~IIDFG~Av~~  214 (351)
                      |||||.|||+.. +.     ++|+|||.|...
T Consensus       129 rDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A          129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             CCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             cCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            999999999953 44     999999999754

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.81  E-value=1.4e-19  Score=174.59  Aligned_cols=139  Identities=19%  Similarity=0.232  Sum_probs=100.7

Q ss_pred             eeeecceeeecCceEEEEEE-----eCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHAS-----PGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVR  110 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~-----~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk  110 (351)
                      -|.+.+.||+|+||.||+|.     ...+        ++.||||+++....                             
T Consensus        66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~--------~~~vavK~~~~~~~-----------------------------  108 (365)
T 3e7e_A           66 LVYVHHLLGEGAFAQVYEATQGDLNDAKN--------KQKFVLKVQKPANP-----------------------------  108 (365)
T ss_dssp             EEEEEEEEEECSSEEEEEEEC-------C--------CCCEEEEEESSCCH-----------------------------
T ss_pred             EEEEEEEeeccCCEEEEEEEecCCccccc--------CcEEEEEEeCCCCh-----------------------------
Confidence            38899999999999999995     3244        89999999875311                             


Q ss_pred             HHHHHHHHHHHHhhhCCC-Ccccccc----ccceEEEEcccCcccccccccc------cCCCCHHHHHHHHHHHHHHHHH
Q psy10135        111 TWAEKEMRNLTRMYSEGL-NVPKPIL----LKSHVLLMTFIGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       111 ~~aekE~~nL~rL~~~gi-~vP~pi~----~~~~vLVMEfig~~G~~~~~L~------~~~l~~~~~~~l~~qll~~L~~  179 (351)
                      .....|...+.+|..... .+...+.    ....+|||||+. .|.....+.      ...++...+..++.||+.+|.+
T Consensus       109 ~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~  187 (365)
T 3e7e_A          109 WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYS-YGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQ  187 (365)
T ss_dssp             HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCC-SCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccC-CCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            012345666666653210 1112221    245689999995 444444342      3458899999999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe------------CCeEEEEEcccccc
Q psy10135        180 LYNKCHLVHADLSEYNMLVH------------KATLFIIDVAQSVE  213 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~------------~g~l~IIDFG~Av~  213 (351)
                      || .+|||||||||.|||+.            ++.++|+|||.|..
T Consensus       188 lH-~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~  232 (365)
T 3e7e_A          188 VH-DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID  232 (365)
T ss_dssp             HH-TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEE
T ss_pred             Hh-hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhh
Confidence            99 59999999999999994            47899999999953

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.81  E-value=1.5e-19  Score=170.98  Aligned_cols=142  Identities=15%  Similarity=0.099  Sum_probs=104.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.......                        .......|
T Consensus        59 y~~~~~LG~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~------------------------~~~~~~~e  106 (311)
T 3p1a_A           59 FQRLSRLGHGSYGEVFKVRSKED--------GRLYAVKRSMSPFRGPK------------------------DRARKLAE  106 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------SCEEEEEEESSSCCSHH------------------------HHHHHHHH
T ss_pred             eeeeheeccCCCeEEEEEEECCC--------CeEEEEEEecccccChH------------------------HHHHHHHH
Confidence            89999999999999999999667        99999998765321111                        11112345


Q ss_pred             HHHHHHh-hhCCCCcccccc----ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ...+.++ .+.+|  +..+.    ....+|||||++  |.....+.  ...++...+..++.||+.+|.+|| ..|||||
T Consensus       107 ~~~~~~~~~h~~i--v~l~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~  181 (311)
T 3p1a_A          107 VGSHEKVGQHPCC--VRLEQAWEEGGILYLQTELCG--PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH-SQGLVHL  181 (311)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEEETTEEEEEEECCC--CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH-HTTEECC
T ss_pred             HHHHHHhcCCCcE--EEEEEEEEeCCEEEEEEeccC--CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCEecC
Confidence            5555555 33332  22222    134589999995  44433333  245889999999999999999999 5899999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||.|||+. ++.++|+|||.|...+
T Consensus       182 Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          182 DVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             CCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             CCCHHHEEECCCCCEEEccceeeeecc
Confidence            9999999994 6899999999987654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.81  E-value=2e-19  Score=171.21  Aligned_cols=143  Identities=15%  Similarity=0.131  Sum_probs=109.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+...||+|+||.||+|.+..+        |+.||||+++.....            +              .....+
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~--------g~~vavK~~~~~~~~------------~--------------~~~~~~   91 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHS--------GRQVAVKMMDLRKQQ------------R--------------RELLFN   91 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEETTTCC------------S--------------HHHHHH
T ss_pred             hhhccEEeccCCCeEEEEEEECCC--------CcEEEEEEEeccchh------------H--------------HHHHHH
Confidence            478888999999999999998656        999999998753210            0              011346


Q ss_pred             HHHHHHHhhhCCCCccc-ccc-ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGLNVPK-PIL-LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~-pi~-~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+.+|.++.+.+|..+. .+. ....+|||||+. +|.....+....++..++..++.||+.+|.+|| ..|+|||||||
T Consensus        92 E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp  169 (321)
T 2c30_A           92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ-GGALTDIVSQVRLNEEQIATVCEAVLQALAYLH-AQGVIHRDIKS  169 (321)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC-SCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC-CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCH
Confidence            88899888776542211 111 245689999995 344434455567899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||+. ++.++|+|||.|...
T Consensus       170 ~NIll~~~~~~kl~Dfg~~~~~  191 (321)
T 2c30_A          170 DSILLTLDGRVKLSDFGFCAQI  191 (321)
T ss_dssp             GGEEECTTCCEEECCCTTCEEC
T ss_pred             HHEEECCCCcEEEeeeeeeeec
Confidence            999996 689999999998654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.80  E-value=2.3e-19  Score=167.20  Aligned_cols=141  Identities=16%  Similarity=0.093  Sum_probs=106.1

Q ss_pred             eeeecceeeecCceEEEEEEe----CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASP----GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~----~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||+|+||.||+|..    ..+        |+.||||+++.....                          ...
T Consensus        11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~--------~~~vavK~~~~~~~~--------------------------~~~   56 (295)
T 3ugc_A           11 HLKFLQQLGKGNFGSVEMCRYDPLQDNT--------GEVVAVKKLQHSTEE--------------------------HLR   56 (295)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTCSSC--------CEEEEEEEESCCCHH--------------------------HHH
T ss_pred             HhhhhheeeccCCEEEEEEEEecccCCC--------CcEEEEEEcccCCHH--------------------------HHH
Confidence            389999999999999999983    234        899999998753110                          011


Q ss_pred             HHHHHHHHHHHhhhCCCCccccccc------cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ...+|+..|.+|.+.+|  +..+..      ...+|||||+. .|.....+..  ..++..++..++.||+.+|.+|| .
T Consensus        57 ~~~~E~~~l~~l~h~~i--v~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~  132 (295)
T 3ugc_A           57 DFEREIEILKSLQHDNI--VKYKGVCYSAGRRNLKLIMEYLP-YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG-T  132 (295)
T ss_dssp             HHHHHHHHHHTCCCTTB--CCEEEEECHHHHTSCEEEEECCT-TCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHhCCCCCE--eeEEEEEecCCCCceEEEEEeCC-CCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh-c
Confidence            23578999999977653  222221      33689999995 3444333433  24888899999999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||||||||.|||+. ++.++|+|||.|...
T Consensus       133 ~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A          133 KRYIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             CCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            9999999999999995 689999999999754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.80  E-value=1.7e-19  Score=166.82  Aligned_cols=139  Identities=16%  Similarity=0.159  Sum_probs=104.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .+        +..||||+++.....                           .....+
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~   68 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKW-RG--------QYDVAIKMIKEGSMS---------------------------EDEFIE   68 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEE-TT--------TEEEEEEEECTTSBC---------------------------HHHHHH
T ss_pred             HHHhHhhcCCCCCceEEEEEE-cC--------CCeEEEEEecCCCCC---------------------------HHHHHH
Confidence            389999999999999999988 55        789999999753210                           011346


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.+|.+.+|  +..+..    ...++||||+. +|.....+..  ..++..++..++.||+.+|.+|| ..||||+
T Consensus        69 E~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~  144 (283)
T 3gen_A           69 EAKVMMNLSHEKL--VQLYGVCTKQRPIFIITEYMA-NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-SKQFLHR  144 (283)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEECSSSSEEEEECCCT-TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHhcCCCCCE--eeEEEEEecCCCeEEEEeccC-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HCCccCC
Confidence            8899999976653  233322    44589999995 3433333333  46888999999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       145 dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A          145 DLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             SCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             CCccceEEEcCCCCEEEccccccccc
Confidence            9999999995 579999999999754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.80  E-value=1.9e-19  Score=165.49  Aligned_cols=139  Identities=16%  Similarity=0.113  Sum_probs=107.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+ .+        +..||||+++.....                           .....+
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~   54 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYW-LN--------KDKVAIKTIREGAMS---------------------------EEDFIE   54 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEE-TT--------TEEEEEEEECTTSBC---------------------------HHHHHH
T ss_pred             hceeeheecCCCccEEEEEEe-cC--------CCeEEEEEecccccC---------------------------HHHHHH
Confidence            389999999999999999998 55        788999999753210                           011356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.++.+.+|  +..+..    ...++||||+. .|.....+..  ..++...+..++.|++.+|.+|| ..|++|+
T Consensus        55 E~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~  130 (269)
T 4hcu_A           55 EAEVMMKLSHPKL--VQLYGVCLEQAPICLVFEFME-HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHR  130 (269)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEECSSSSEEEEEECCT-TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHHhCCCCCE--eeEEEEEecCCceEEEEEeCC-CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH-hCCeecC
Confidence            8999999977653  333322    44689999995 3333333332  34788899999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       131 dikp~Nil~~~~~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A          131 DLAARNCLVGENQVIKVSDFGMTRFV  156 (269)
T ss_dssp             CCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             CcchheEEEcCCCCEEeccccccccc
Confidence            9999999994 688999999999754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.80  E-value=1.8e-19  Score=175.70  Aligned_cols=149  Identities=19%  Similarity=0.199  Sum_probs=110.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+.+.||+|+||.||+|.+..+        |+.||||+++.........                    ........+
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~--------~~~~avK~i~~~~~~~~~~--------------------~~~~~~~~~   64 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRR--------------------GVCREEIER   64 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEBCSSTTCSS--------------------SBCHHHHHH
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCC--------CCEEEEEEEEccccccccc--------------------hhHHHHHHH
Confidence            399999999999999999999667        9999999998643211000                    001122457


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.+|.+.+|. +-..+.. ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+||||||||
T Consensus        65 E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlk  142 (361)
T 2yab_A           65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVS-GGELFDFLAQKESLSEEEATSFIKQILDGVNYLH-TKKIAHFDLK  142 (361)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCS
T ss_pred             HHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCC
Confidence            89999998766532 2122222 34589999995 3444444433 45889999999999999999999 5999999999


Q ss_pred             CCceEEe-CC----eEEEEEccccccC
Q psy10135        193 EYNMLVH-KA----TLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g----~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++    .++|+|||.|...
T Consensus       143 p~NIll~~~~~~~~~vkl~DFG~a~~~  169 (361)
T 2yab_A          143 PENIMLLDKNIPIPHIKLIDFGLAHEI  169 (361)
T ss_dssp             GGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred             HHHEEEeCCCCCccCEEEEecCCceEc
Confidence            9999995 34    7999999999754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.80  E-value=9.3e-20  Score=179.64  Aligned_cols=145  Identities=16%  Similarity=0.148  Sum_probs=109.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++........                  .     .....+|
T Consensus        17 y~i~~~LG~G~fG~V~~~~~~~~--------~~~~AiK~~~~~~~~~~~------------------~-----~~~~~~E   65 (384)
T 4fr4_A           17 FEILRAIGKGSFGKVCIVQKNDT--------KKMYAMKYMNKQKCVERN------------------E-----VRNVFKE   65 (384)
T ss_dssp             EEEEEEEECCTTCCEEEEEETTT--------CCEEEEEEEEHHHHHHTT------------------C-----HHHHHHH
T ss_pred             eEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEehhhcccHH------------------H-----HHHHHHH
Confidence            89999999999999999998666        899999998753211000                  0     1123468


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|..+.+.+|. +-..+. ....++||||+. +|.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        66 ~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp  143 (384)
T 4fr4_A           66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL-GGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ-NQRIIHRDMKP  143 (384)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT-TEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCcH
Confidence            8999988766532 111111 145689999995 3444334443 36889999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ +|.++|+|||.|...
T Consensus       144 ~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A          144 DNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             GGEEECTTSCEEECCCTTCEEC
T ss_pred             HHeEECCCCCEEEeccceeeec
Confidence            999995 689999999999754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.80  E-value=1.8e-19  Score=170.16  Aligned_cols=143  Identities=21%  Similarity=0.269  Sum_probs=107.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+.+.||+|+||.||+|.+..+        |+.||||+++....  ..                  .     .....+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~--~~------------------~-----~~~~~~   56 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHKKT--------GDLFAIKVFNNISF--LR------------------P-----VDVQMR   56 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECGGGG--GS------------------C-----HHHHHH
T ss_pred             CEEEEEEecCCCCeEEEEEEECCC--------CcEEEEEEeccccc--cc------------------h-----HHHHHH
Confidence            599999999999999999999666        89999999875210  00                  0     011246


Q ss_pred             HHHHHHHhhhCCCCccccccc------cceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |+..|.+|.+.+|  +..+..      ...+|||||+. .|.....+..    ..++..++..++.||+.+|.+|| ..|
T Consensus        57 E~~~l~~l~h~~i--v~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~  132 (319)
T 4euu_A           57 EFEVLKKLNHKNI--VKLFAIEEETTTRHKVLIMEFCP-CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-ENG  132 (319)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEECTTTCCEEEEEECCT-TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHHhcCCCCc--ceEEEEeecCCCceEEEEEeCCC-CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH-HCC
Confidence            8999999976653  222221      24589999994 3333333332    23888999999999999999999 599


Q ss_pred             ccccCCCCCceEE----e-CCeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLV----H-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi----~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||||||.|||+    . .+.++|+|||.|....
T Consensus       133 ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A          133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            9999999999998    3 2469999999997653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.80  E-value=8.1e-20  Score=177.61  Aligned_cols=144  Identities=16%  Similarity=0.170  Sum_probs=105.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.........                       ......|
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~--------~~~~AiK~~~~~~~~~~~~-----------------------~~~~~~E   70 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGT--------DELYAVKILKKDVVIQDDD-----------------------VECTMVE   70 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTE--------EEEEEEEEEEHHHHHHTTC-----------------------HHHHHHH
T ss_pred             cEEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEHHHhhcchH-----------------------HHHHHHH
Confidence            89999999999999999998666        8999999997632110000                       0112356


Q ss_pred             HHHHHHh-hhCCCC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRM-YSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL-~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|..+ .+..|. +-..+.. ...+|||||+. +|.+...+.. ..++...+..++.||+.+|.+|| ..||||||||
T Consensus        71 ~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlk  148 (353)
T 2i0e_A           71 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN-GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ-SKGIIYRDLK  148 (353)
T ss_dssp             HHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCC
T ss_pred             HHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCEEeccCC
Confidence            6777665 333221 1111111 45689999995 3444444443 46889999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ +|.++|+|||+|..
T Consensus       149 p~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A          149 LDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             GGGEEECTTSCEEECCCTTCBC
T ss_pred             HHHEEEcCCCcEEEEeCCcccc
Confidence            9999995 68999999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.80  E-value=1.1e-19  Score=173.93  Aligned_cols=143  Identities=17%  Similarity=0.125  Sum_probs=108.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||++.......    .               .     .....+|
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~----~---------------~-----~~~~~~E   66 (351)
T 3mi9_A           19 YEKLAKIGQGTFGEVFKARHRKT--------GQKVALKKVLMENEKE----G---------------F-----PITALRE   66 (351)
T ss_dssp             EEEEEECSSCSTTSEEEEEETTT--------CCEEEEEECCCSSCSS----S---------------S-----CHHHHHH
T ss_pred             eeEEEEEecCCCcEEEEEEECCC--------CCEEEEEEEecccccc----c---------------c-----hHHHHHH
Confidence            99999999999999999999666        9999999986532100    0               0     0113468


Q ss_pred             HHHHHHhhhCCCC-ccccccc---------cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL---------KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~---------~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +..|.+|.+.+|. +...+..         ...+|||||++  |.....+..  ..++..++..++.||+.+|.+|| .+
T Consensus        67 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~  143 (351)
T 3mi9_A           67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-RN  143 (351)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS--EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC--CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HC
Confidence            9999999766532 1111111         23579999995  544443433  35888999999999999999999 59


Q ss_pred             CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||||.|||+. ++.++|+|||.|...
T Consensus       144 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A          144 KILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            999999999999995 689999999998654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.80  E-value=2.1e-19  Score=171.42  Aligned_cols=144  Identities=17%  Similarity=0.224  Sum_probs=103.6

Q ss_pred             eeeecceeeecCceEEEEEEeC---CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPG---ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~---~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      -|++.+.||+|+||.||+|...   .+        |+.||||+++........                      .....
T Consensus        18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~--------~~~~aiK~~~~~~~~~~~----------------------~~~~~   67 (327)
T 3a62_A           18 CFELLRVLGKGGYGKVFQVRKVTGANT--------GKIFAMKVLKKAMIVRNA----------------------KDTAH   67 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECSSTTT--------TCEEEEEEECCC---------------------------------
T ss_pred             HeEEEEEEEeCCCEEEEEEEEeccCCC--------CcEEEEEEEEHHHhhhhh----------------------hHHHH
Confidence            3999999999999999999873   24        899999999864211000                      00111


Q ss_pred             HHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        113 AEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      ..+|+..|.+|.+.+|  ++.+.    ....+|||||+. +|.....+. ...++...+..++.||+.+|.+|| ..|||
T Consensus        68 ~~~E~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH-~~~iv  143 (327)
T 3a62_A           68 TKAERNILEEVKHPFI--VDLIYAFQTGGKLYLILEYLS-GGELFMQLEREGIFMEDTACFYLAEISMALGHLH-QKGII  143 (327)
T ss_dssp             ---HHHHHHHCCCTTB--CCEEEEEECSSCEEEEEECCT-TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHHHHHhCCCCCc--cceeEEEEcCCEEEEEEeCCC-CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hCCEE
Confidence            2468888999877653  22222    145689999995 344333333 245788889999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||||||.|||+. ++.++|+|||.|..
T Consensus       144 H~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A          144 YRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             CCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             cccCCHHHeEECCCCcEEEEeCCcccc
Confidence            999999999995 68999999999864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.80  E-value=2.6e-19  Score=165.19  Aligned_cols=141  Identities=15%  Similarity=0.130  Sum_probs=107.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .+        +..||||+++.....                           .....+
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~   57 (279)
T 1qpc_A           14 TLKLVERLGAGQFGEVWMGYY-NG--------HTKVAVKSLKQGSMS---------------------------PDAFLA   57 (279)
T ss_dssp             GEEEEEEEEEETTEEEEEEEE-TT--------TEEEEEEEECTTSSC---------------------------HHHHHH
T ss_pred             hhhheeeecCCCCeEEEEEEE-cC--------CcEEEEEEecCCccc---------------------------HHHHHH
Confidence            489999999999999999998 55        788999998753210                           012356


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.+|.+.+| ++...+.....++||||+. +|.....+...   .++..++..++.|++.+|.+|| ..|++|+||
T Consensus        58 E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~di  135 (279)
T 1qpc_A           58 EANLMKQLQHQRLVRLYAVVTQEPIYIITEYME-NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIHRDL  135 (279)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT-TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred             HHHHHHhCCCcCcceEEEEEcCCCcEEEEecCC-CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCC
Confidence            8899999976653 2222223355689999995 33333333322   5888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||.|...
T Consensus       136 kp~Nil~~~~~~~kl~Dfg~~~~~  159 (279)
T 1qpc_A          136 RAANILVSDTLSCKIADFGLARLI  159 (279)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CHhhEEEcCCCCEEECCCcccccc
Confidence            99999995 579999999999754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.80  E-value=9.1e-20  Score=171.89  Aligned_cols=143  Identities=12%  Similarity=0.189  Sum_probs=105.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....                     ++  .......+|
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~---------------------~~--~~~~~~~~E   62 (311)
T 3ork_A           14 YELGEILGFGGMSEVHLARDLRD--------HRDVAVKVLRADLAR---------------------DP--SFYLRFRRE   62 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECTTTTT---------------------SH--HHHHHHHHH
T ss_pred             EEEEEEEccCCCEEEEEEEECCC--------CceEEEEEeCccccC---------------------CH--HHHHHHHHH
Confidence            99999999999999999998666        999999999763210                     00  111223567


Q ss_pred             HHHHHHhhhCCCCccccccc----cc----eEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KS----HVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~----~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      +..+.+|.+.+|  +..+..    ..    .+|||||+. +|.....+. ...++..++..++.||+.+|.+|| .+|||
T Consensus        63 ~~~l~~l~hp~i--v~~~~~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~iv  138 (311)
T 3ork_A           63 AQNAAALNHPAI--VAVYDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH-QNGII  138 (311)
T ss_dssp             HTTCCCCCCTTB--CCEEEEEEEEETTEEEEEEEEECCC-EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHcCCCCCc--ceEEEeeeccCCCCcccEEEEecCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCC
Confidence            888877766553  233322    11    289999994 233322232 346888999999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+. ++.++|+|||.|...
T Consensus       139 H~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A          139 HRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             CCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             cCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence            999999999995 689999999998643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.80  E-value=3e-19  Score=166.84  Aligned_cols=142  Identities=18%  Similarity=0.147  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+..+        |+.||||++......                          ......+
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~--------------------------~~~~~~~   57 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDC--------DKRVAIKKIVLTDPQ--------------------------SVKHALR   57 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTT--------TEEEEEEEEECCSHH--------------------------HHHHHHH
T ss_pred             ceeEEEEeccCCCeEEEEEEECCC--------CeEEEEEEEecCChH--------------------------HHHHHHH
Confidence            389999999999999999999666        899999998753110                          0112346


Q ss_pred             HHHHHHHhhhCCCC-ccccc---------------cccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLN-VPKPI---------------LLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi---------------~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~  179 (351)
                      |+..|.+|.+.+|. +-..+               .....++||||++  |.....+...+++...+..++.||+.+|.+
T Consensus        58 e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~  135 (320)
T 2i6l_A           58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME--TDLANVLEQGPLLEEHARLFMYQLLRGLKY  135 (320)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS--EEHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC--CCHHHHhhcCCccHHHHHHHHHHHHHHHHH
Confidence            88999998766532 11111               1134579999994  655555666678999999999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      || .+||||+||||.|||++  ++.++|+|||.|...
T Consensus       136 lH-~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~  171 (320)
T 2i6l_A          136 IH-SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM  171 (320)
T ss_dssp             HH-HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC
T ss_pred             HH-hCCEecCCCCHHHEEEcCCCCeEEEccCcccccc
Confidence            99 59999999999999995  468999999999754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.80  E-value=1.5e-19  Score=174.40  Aligned_cols=147  Identities=12%  Similarity=0.109  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++........  .                   .......+|
T Consensus        26 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~--~-------------------~~~~~~~~E   76 (351)
T 3c0i_A           26 YELCEVIGKGPFSVVRRCINRET--------GQQFAVKIVDVAKFTSSP--G-------------------LSTEDLKRE   76 (351)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHTSS--S-------------------CCHHHHHHH
T ss_pred             eEEeeEEeeCCCEEEEEEEECCC--------CCEEEEEEEEhhhccccc--c-------------------chHHHHHHH
Confidence            99999999999999999998667        999999998752211000  0                   001123578


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..|..|.+.+| .+-..+.. ...+|||||+. +|.....+.     ...++...+..++.||+.+|.+|| .+|||||
T Consensus        77 ~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~-g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivHr  154 (351)
T 3c0i_A           77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-DNNIIHR  154 (351)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECS
T ss_pred             HHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCC-CCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH-HCCceec
Confidence            999999977653 22222222 34589999995 333322222     124788899999999999999999 5999999


Q ss_pred             CCCCCceEEeC----CeEEEEEccccccC
Q psy10135        190 DLSEYNMLVHK----ATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~~----g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+..    +.++|+|||.|...
T Consensus       155 Dlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          155 DVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             CCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             cCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            99999999953    34999999999754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.80  E-value=2e-19  Score=171.06  Aligned_cols=141  Identities=21%  Similarity=0.186  Sum_probs=108.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||++.....                        .........+|
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~------------------------~~~~~~~~~~E   74 (331)
T 4aaa_A           27 YENLGLVGEGSYGMVMKCRNKDT--------GRIVAIKKFLESDD------------------------DKMVKKIAMRE   74 (331)
T ss_dssp             EEEEEEGGGGTTSSEEEEEETTT--------CCEEEEEEEESCSS------------------------CHHHHHHHHHH
T ss_pred             heeeeEEeecCCEEEEEEEECCC--------CceEEEEEEecCCC------------------------chHHHHHHHHH
Confidence            89999999999999999999666        99999999865321                        11223334579


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  +..+..    ...+|||||++  |..+..+.  ...++...+..++.||+.+|.+|| ..|+||||
T Consensus        75 ~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~d  149 (331)
T 4aaa_A           75 IKLLKQLRHENL--VNLLEVCKKKKRWYLVFEFVD--HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH-SHNIIHRD  149 (331)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEEETTEEEEEEECCS--EEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCC
T ss_pred             HHHHhhCCCCCE--eeEEEEeecCCEEEEEEecCC--cchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-HCCEEccC
Confidence            999999987653  333322    34589999995  44433332  346888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       150 lkp~Nil~~~~~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A          150 IKPENILVSQSGVVKLCDFGFARTL  174 (331)
T ss_dssp             CCGGGEEECTTSCEEECCCTTC---
T ss_pred             cChheEEEcCCCcEEEEeCCCceee
Confidence            999999995 689999999999654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.80  E-value=4.4e-19  Score=167.54  Aligned_cols=137  Identities=15%  Similarity=0.173  Sum_probs=104.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                             ....+|
T Consensus        38 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~-----------------------------~~~~~E   80 (330)
T 3nsz_A           38 YQLVRKLGRGKYSEVFEAINITN--------NEKVVVKILKPVKK-----------------------------KKIKRE   80 (330)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECSCCH-----------------------------HHHHHH
T ss_pred             eEEEEEecccCCeEEEEEEECCC--------CcEEEEEEecccch-----------------------------HHHHHH
Confidence            99999999999999999998666        99999999875210                             113568


Q ss_pred             HHHHHHhh-hCCCC-cccccc---ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMY-SEGLN-VPKPIL---LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~-~~gi~-vP~pi~---~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|. +.+|. +...+.   ....+|||||+.  |..+..+.. .++..++..++.||+.+|.+|| .+|||||||
T Consensus        81 ~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Di  156 (330)
T 3nsz_A           81 IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN--NTDFKQLYQ-TLTDYDIRFYMYEILKALDYCH-SMGIMHRDV  156 (330)
T ss_dssp             HHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC--CCCHHHHGG-GCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC--chhHHHHHH-hCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCC
Confidence            89999996 44432 111111   134589999995  333333222 4788889999999999999999 599999999


Q ss_pred             CCCceEEe-CC-eEEEEEccccccC
Q psy10135        192 SEYNMLVH-KA-TLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g-~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++ .++|+|||.|...
T Consensus       157 kp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          157 KPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             SGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             CHHHEEEcCCCCEEEEEeCCCceEc
Confidence            99999996 45 8999999999643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.80  E-value=2.9e-19  Score=170.41  Aligned_cols=146  Identities=18%  Similarity=0.201  Sum_probs=109.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.........                    ........+|
T Consensus        13 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~~~--------------------~~~~~~~~~E   64 (326)
T 2y0a_A           13 YDTGEELGSGQFAVVKKCREKST--------GLQYAAKFIKKRRTKSSRR--------------------GVSREDIERE   64 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTT--------CCEEEEEEEEBCCSTTCSS--------------------SBCHHHHHHH
T ss_pred             eEeceEEeeCCCeEEEEEEECCC--------CcEEEEEEEEccccccccc--------------------hhhHHHHHHH
Confidence            89999999999999999999666        9999999997642211000                    0011224579


Q ss_pred             HHHHHHhhhCCCCcccccc---c-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL---L-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~---~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  +..+.   . ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+|||||||
T Consensus        65 ~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dl  140 (326)
T 2y0a_A           65 VSILKEIQHPNV--ITLHEVYENKTDVILILELVA-GGELFDFLAEKESLTEEEATEFLKQILNGVYYLH-SLQIAHFDL  140 (326)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEECSSEEEEEEECCC-SCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHhCCCCCC--CcEEEEEEeCCEEEEEEEcCC-CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH-HCCeEcCCC
Confidence            999999977653  22322   2 34689999995 3443333432 45888999999999999999999 599999999


Q ss_pred             CCCceEEeC-C----eEEEEEccccccC
Q psy10135        192 SEYNMLVHK-A----TLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~~-g----~l~IIDFG~Av~~  214 (351)
                      ||.|||+.. +    .++|+|||.|...
T Consensus       141 kp~NIll~~~~~~~~~~kl~Dfg~a~~~  168 (326)
T 2y0a_A          141 KPENIMLLDRNVPKPRIKIIDFGLAHKI  168 (326)
T ss_dssp             CGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             CHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence            999999953 4    7999999999754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.80  E-value=5.6e-19  Score=169.35  Aligned_cols=142  Identities=18%  Similarity=0.170  Sum_probs=107.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....                        ........+|
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~------------------------~~~~~~~~~E   73 (353)
T 3coi_A           26 YVSPTHVGSGAYGSVCSAIDKRS--------GEKVAIKKLSRPFQS------------------------EIFAKRAYRE   73 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEESSTTSS------------------------HHHHHHHHHH
T ss_pred             EEEeeeEecCCCeEEEEEEECCC--------CCEEEEEEecccccc------------------------hHHHHHHHHH
Confidence            89999999999999999998666        999999998752110                        0111224578


Q ss_pred             HHHHHHhhhCCC-Ccccccccc-------ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLK-------SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~-------~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|.++.+.+| .+...+...       ..++||||++  |... .+....++..++..++.||+.+|.+|| .+||||
T Consensus        74 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~-~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivH  149 (353)
T 3coi_A           74 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ--TDLQ-KIMGLKFSEEKIQYLVYQMLKGLKYIH-SAGVVH  149 (353)
T ss_dssp             HHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS--EEGG-GTTTSCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHhcCCCCcccHhheEecccccccceeEEEEecccc--CCHH-HHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccc
Confidence            899999976653 222222111       2489999994  5332 333345889999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.++|+|||.|...
T Consensus       150 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          150 RDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             SSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             CCCCHHHEeECCCCcEEEeecccccCC
Confidence            99999999995 689999999999754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.80  E-value=5e-19  Score=169.80  Aligned_cols=167  Identities=16%  Similarity=0.140  Sum_probs=116.4

Q ss_pred             hhHHHHHHHHHhcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccc
Q psy10135         21 PRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGY  100 (351)
Q Consensus        21 ~rt~~~L~~l~~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~  100 (351)
                      +..+..+..+..-.--|.+.+.||+|+||.||+|.+ .+        |+.||||+++......... ...          
T Consensus         8 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~--------~~~vavK~~~~~~~~~~~~-~~~----------   67 (362)
T 3pg1_A            8 AAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVD-SE--------GIPVAIKRVFNTVSDGRTV-NIL----------   67 (362)
T ss_dssp             HHHHHHHHHHHHTTCSCEEEEEEEEETTEEEEEEEC-TT--------SCEEEEEEECEECCTTSCE-EGG----------
T ss_pred             HHHHHHHHHHHHhccceEEeEEeccCCCEEEEEEEC-CC--------CCeEEEEeccccCCccchh-hhh----------
Confidence            344455555555555699999999999999999998 56        8999999987532111100 000          


Q ss_pred             cCCChhHHHHHHHHHHHHHHHHhhhCCC-Cccccccc------cceEEEEcccCcccccccccccC--CCCHHHHHHHHH
Q psy10135        101 CKKNPRKMVRTWAEKEMRNLTRMYSEGL-NVPKPILL------KSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYR  171 (351)
Q Consensus       101 ~k~n~r~~vk~~aekE~~nL~rL~~~gi-~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~  171 (351)
                        .  .........+|+..|.+|.+.+| .+...+..      ...+|||||++  |.....+...  .++...+..++.
T Consensus        68 --~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~  141 (362)
T 3pg1_A           68 --S--DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR--TDLAQVIHDQRIVISPQHIQYFMY  141 (362)
T ss_dssp             --G--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS--EEHHHHHHCTTSCCCHHHHHHHHH
T ss_pred             --h--hhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC--CCHHHHHHhcccCCCHHHHHHHHH
Confidence              0  01122335679999999987664 22222211      23589999995  5554444433  588899999999


Q ss_pred             HHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        172 ECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       172 qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||+.+|.+|| .+||||+||||.|||+. ++.++|+|||.|...
T Consensus       142 qi~~~l~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (362)
T 3pg1_A          142 HILLGLHVLH-EAGVVHRDLHPGNILLADNNDITICDFNLARED  184 (362)
T ss_dssp             HHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECCTTC----
T ss_pred             HHHHHHHHHH-HCcCEecCCChHHEEEcCCCCEEEEecCccccc
Confidence            9999999999 59999999999999995 689999999999643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.80  E-value=5.8e-19  Score=161.95  Aligned_cols=144  Identities=14%  Similarity=0.106  Sum_probs=107.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+|
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~~~e   60 (289)
T 1x8b_A           13 FHELEKIGSGEFGSVFKCVKRLD--------GCIYAIKRSKKPLAGS------------------------VDEQNALRE   60 (289)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECCCTTS------------------------HHHHHHHHH
T ss_pred             hhhhhhhcCCCceEEEEEEEcCC--------CceEEEEEeccccccc------------------------HHHHHHHHH
Confidence            89999999999999999999666        9999999987632110                        111223467


Q ss_pred             HHHHHHh-hhCCCCcccccc----ccceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        117 MRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      +..+.++ .+.+|  +..+.    ....+|||||+. .|.....+..     ..++..++..++.||+.+|.+|| .+||
T Consensus        61 ~~~~~~l~~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~i  136 (289)
T 1x8b_A           61 VYAHAVLGQHSHV--VRYFSAWAEDDHMLIQNEYCN-GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-SMSL  136 (289)
T ss_dssp             HHHHHHSCSCTTB--CCEEEEEEETTEEEEEEECCT-TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHhCCCCCe--eeeeeeeecCCeEEEEEEecC-CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH-hCCE
Confidence            8888887 55443  22222    245689999994 3343333332     45888999999999999999999 5999


Q ss_pred             cccCCCCCceEEeC--------------------CeEEEEEccccccCCC
Q psy10135        187 VHADLSEYNMLVHK--------------------ATLFIIDVAQSVEHDH  216 (351)
Q Consensus       187 VH~DLkp~NILi~~--------------------g~l~IIDFG~Av~~~~  216 (351)
                      |||||||.|||+..                    ..++|+|||.|.....
T Consensus       137 vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  186 (289)
T 1x8b_A          137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS  186 (289)
T ss_dssp             ECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTC
T ss_pred             eecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCC
Confidence            99999999999952                    2699999999976643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.80  E-value=2.3e-19  Score=166.27  Aligned_cols=148  Identities=18%  Similarity=0.099  Sum_probs=102.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.++||+|+||.||+|.+..+     ...+..||||+++....                         ........+
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~~   65 (281)
T 1mp8_A           16 RIELGRCIGEGQFGDVHQGIYMSP-----ENPALAVAIKTCKNCTS-------------------------DSVREKFLQ   65 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC-------CCEEEEEEECTTTTS-------------------------HHHHHHHHH
T ss_pred             HeEEEeEeeecCCeeEEEEEEecC-----CCCceEEEEEeccccCC-------------------------HHHHHHHHH
Confidence            489999999999999999987432     11256799998865210                         011122356


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.++.+.+| ++...+.....++||||+. .|.....+..  ..++...+..++.|++.+|.+|| .+|+||||||
T Consensus        66 e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlk  143 (281)
T 1mp8_A           66 EALTMRQFDHPHIVKLIGVITENPVWIIMELCT-LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIA  143 (281)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECSSSCEEEEECCT-TEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCS
T ss_pred             HHHHHHhCCCCccceEEEEEccCccEEEEecCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccccc
Confidence            8899998876653 2222223355689999995 3333333332  35888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+. ++.++|+|||.|....
T Consensus       144 p~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A          144 ARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             GGGEEEEETTEEEECC--------
T ss_pred             HHHEEECCCCCEEECccccccccC
Confidence            9999995 7899999999997553

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.80  E-value=3.2e-19  Score=173.45  Aligned_cols=144  Identities=9%  Similarity=0.120  Sum_probs=109.3

Q ss_pred             eeeecceeeec--CceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         36 VSEVNGCISTG--KEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        36 ~y~I~~~Ig~G--~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      -|++.+.||.|  +||.||+|.+..+        |+.||||+++.....                        .......
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~--------~~~vavK~~~~~~~~------------------------~~~~~~~   73 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPT--------GEYVTVRRINLEACS------------------------NEMVTFL   73 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTT--------CCEEEEEEEEGGGSC------------------------HHHHHHH
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCC--------CCEEEEEEecccccC------------------------hHHHHHH
Confidence            49999999999  9999999999667        999999999753110                        0112234


Q ss_pred             HHHHHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        114 EKEMRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       114 ekE~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      .+|+..|++|.+.+| .+-..+. ....+|||||+. .|.....+..   ..++...+..++.||+.+|.+|| .+||||
T Consensus        74 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH  151 (389)
T 3gni_B           74 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA-YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH-HMGYVH  151 (389)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT-TCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC-CCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Confidence            579999999977653 2212222 244689999995 3433333322   45888899999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |||||.|||++ ++.++|+|||.+..
T Consensus       152 rDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          152 RSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             CCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CCCCHHHEEEcCCCCEEEccccccee
Confidence            99999999995 68999999998753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.80  E-value=5e-19  Score=167.68  Aligned_cols=140  Identities=18%  Similarity=0.177  Sum_probs=105.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCC-cEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELE-KEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g-~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |++.+.||+|+||.||+|.+..+        + +.||||+++....                           ......+
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~--------~~~~vavK~~~~~~~---------------------------~~~~~~~   65 (355)
T 2eu9_A           21 YEIVGNLGEGTFGKVVECLDHAR--------GKSQVALKIIRNVGK---------------------------YREAARL   65 (355)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------TTEEEEEEEECSCHH---------------------------HHHHHHH
T ss_pred             EEEEEEeeccCCeEEEEEEecCC--------CceEEEEEEEccccc---------------------------chhHHHH
Confidence            89999999999999999998554        5 7899999875210                           1122346


Q ss_pred             HHHHHHHhhhCCC-C---cccccc----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        116 EMRNLTRMYSEGL-N---VPKPIL----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       116 E~~nL~rL~~~gi-~---vP~pi~----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      |+..|.+|.+... .   +...+.    ....+|||||++  |..+..+..   ..++..++..++.||+.+|.+|| .+
T Consensus        66 E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH-~~  142 (355)
T 2eu9_A           66 EINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG--KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH-EN  142 (355)
T ss_dssp             HHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEeccC--CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HC
Confidence            8888888865431 1   222221    144589999994  544444433   25888999999999999999999 59


Q ss_pred             CccccCCCCCceEE--------------------eCCeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLV--------------------HKATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi--------------------~~g~l~IIDFG~Av~~  214 (351)
                      |||||||||.|||+                    .++.++|+|||.|...
T Consensus       143 ~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~  192 (355)
T 2eu9_A          143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD  192 (355)
T ss_dssp             TEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEET
T ss_pred             CcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccc
Confidence            99999999999999                    2478999999999754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.80  E-value=5e-19  Score=166.32  Aligned_cols=141  Identities=17%  Similarity=0.174  Sum_probs=106.3

Q ss_pred             eeecceeeecCceEEEEEEeC-CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPG-ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~-~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |++.+.||+|+||.||+|.+. .+        |+.||||+++....                           ......+
T Consensus        16 y~~~~~lg~G~~g~V~~~~~~~~~--------~~~vavK~~~~~~~---------------------------~~~~~~~   60 (339)
T 1z57_A           16 YEIVDTLGEGAFGKVVECIDHKAG--------GRHVAVKIVKNVDR---------------------------YCEAARS   60 (339)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTT--------TEEEEEEEECSSHH---------------------------HHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEecCCC--------CcEEEEEEEecCCc---------------------------hhHHHHH
Confidence            999999999999999999873 35        88999999875210                           0112356


Q ss_pred             HHHHHHHhhhCCC-C---ccccccc----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        116 EMRNLTRMYSEGL-N---VPKPILL----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       116 E~~nL~rL~~~gi-~---vP~pi~~----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      |+..|..|.+.+. .   ++..+..    ...+|||||++  |.....+..   .+++...+..++.||+.+|.+|| .+
T Consensus        61 e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~  137 (339)
T 1z57_A           61 EIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLG--LSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH-SN  137 (339)
T ss_dssp             HHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCCC--CCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH-HC
Confidence            8888888865431 1   2333322    44589999994  544444433   25788899999999999999999 59


Q ss_pred             CccccCCCCCceEEe--------------------CCeEEEEEccccccCC
Q psy10135        185 HLVHADLSEYNMLVH--------------------KATLFIIDVAQSVEHD  215 (351)
Q Consensus       185 glVH~DLkp~NILi~--------------------~g~l~IIDFG~Av~~~  215 (351)
                      |||||||||.|||+.                    ++.++|+|||.|....
T Consensus       138 ~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~  188 (339)
T 1z57_A          138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD  188 (339)
T ss_dssp             TEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT
T ss_pred             CCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc
Confidence            999999999999995                    4569999999997543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.80  E-value=7.2e-20  Score=182.07  Aligned_cols=145  Identities=21%  Similarity=0.181  Sum_probs=102.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.........                       ......|
T Consensus       150 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~-----------------------~~~~~~e  198 (446)
T 4ejn_A          150 FEYLKLLGKGTFGKVILVKEKAT--------GRYYAMKILKKEVIVAKDE-----------------------VAHTLTE  198 (446)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEHHHHC----------------------------------
T ss_pred             cEEeEEEeeCcCEEEEEEEEcCC--------CCEEEEEEEEhhhhhhhHH-----------------------HHHHHHH
Confidence            99999999999999999998666        9999999997532110000                       0011346


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|.++.+.+|. +...+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+||..+|||||||||
T Consensus       199 ~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp  277 (446)
T 4ejn_A          199 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN-GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL  277 (446)
T ss_dssp             --CCCCCSCTTSCCEEEEEEETTEEEEEECCCS-SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCG
T ss_pred             HHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCH
Confidence            6677776655432 1111111 44579999995 344433333 346888999999999999999999438999999999


Q ss_pred             CceEEe-CCeEEEEEcccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .|||++ ++.++|+|||.|..
T Consensus       278 ~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          278 ENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             GGEEECSSSCEEECCCCCCCT
T ss_pred             HHEEECCCCCEEEccCCCcee
Confidence            999994 68999999999875

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.80  E-value=4.2e-19  Score=176.42  Aligned_cols=140  Identities=18%  Similarity=0.170  Sum_probs=105.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                           .......|
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~~~--------~~~vAvK~~~~~~~---------------------------~~~~~~~E  143 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDHKV--------HQHVALKMVRNEKR---------------------------FHRQAAEE  143 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEETTT--------TEEEEEEEECSCHH---------------------------HHHHHHHH
T ss_pred             EEEEEEcccCccEEEEEEEECCC--------CcEEEEEEECCccc---------------------------hHHHHHHH
Confidence            99999999999999999998666        89999999875210                           11123468


Q ss_pred             HHHHHHhhhCC-CCcccc---ccc----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        117 MRNLTRMYSEG-LNVPKP---ILL----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       117 ~~nL~rL~~~g-i~vP~p---i~~----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      ++.|..|.... ...|..   +..    ...+|||||++  |.....+..   ..++...+..++.||+.+|.+|| ..|
T Consensus       144 ~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~  220 (429)
T 3kvw_A          144 IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS--MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH-KNR  220 (429)
T ss_dssp             HHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC--CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HHT
T ss_pred             HHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC--CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-HCC
Confidence            88888886542 122222   221    34579999995  544433332   24888899999999999999999 489


Q ss_pred             ccccCCCCCceEEe-CCe--EEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KAT--LFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~--l~IIDFG~Av~~  214 (351)
                      ||||||||.|||+. ++.  ++|+|||.|...
T Consensus       221 ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             eecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            99999999999995 454  999999999654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.80  E-value=3e-19  Score=163.84  Aligned_cols=139  Identities=16%  Similarity=0.128  Sum_probs=106.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .+        +..||||+++.....                           .....+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~   52 (268)
T 3sxs_A            9 EITLLKELGSGQFGVVKLGKW-KG--------QYDVAVKMIKEGSMS---------------------------EDEFFQ   52 (268)
T ss_dssp             GEEEEEEEEEETTEEEEEEEE-TT--------TEEEEEEEECBTTBC---------------------------HHHHHH
T ss_pred             heeeeeeeccCCCceEEEEEe-cC--------ceeEEEEEeccCCCc---------------------------HHHHHH
Confidence            389999999999999999988 55        778999998753210                           011356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.+|.+.+|  +..+..    ...++||||+. .|.....+..  ..++..++..++.|++.+|.+|| ..|+|||
T Consensus        53 E~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~  128 (268)
T 3sxs_A           53 EAQTMMKLSHPKL--VKFYGVCSKEYPIYIVTEYIS-NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE-SHQFIHR  128 (268)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECSSSSEEEEEECCT-TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH-HTTEEES
T ss_pred             HHHHHHhCCCCCE--eeEEEEEccCCceEEEEEccC-CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeecC
Confidence            8899999987653  233322    34589999995 3333333332  24888899999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       129 dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A          129 DLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             SCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             CcCcceEEECCCCCEEEccCccceec
Confidence            9999999995 689999999999754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.80  E-value=3.3e-19  Score=164.66  Aligned_cols=144  Identities=19%  Similarity=0.176  Sum_probs=108.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|.+..+        |+.||+|+++......                      .  ......+
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~----------------------~--~~~~~~~   54 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHKTT--------GLEFAAKIINTKKLSA----------------------R--DFQKLER   54 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEGGGCCH----------------------H--HHHHHHH
T ss_pred             hhhhhhhhcCcCCeEEEEEEEcCC--------CceEEEEEeecccCCH----------------------H--HHHHHHH
Confidence            489999999999999999998666        9999999987532110                      0  0112357


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..+.+|.+.+|  +..+..    ...++||||+. +|.....+. ...++..++..++.|++.+|.+|| .+|+||||
T Consensus        55 e~~~l~~l~h~~i--~~~~~~~~~~~~~~~v~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~d  130 (284)
T 3kk8_A           55 EARICRKLQHPNI--VRLHDSIQEESFHYLVFDLVT-GGELFEDIVAREFYSEADASHCIQQILESIAYCH-SNGIVHRN  130 (284)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHHcCCCCc--CeEEEEEEcCCEEEEEEecCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcCcCC
Confidence            8999999977663  233322    34589999995 333323332 345888999999999999999999 59999999


Q ss_pred             CCCCceEEe-C---CeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-K---ATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~---g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. +   +.++|+|||.|....
T Consensus       131 ikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A          131 LKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             CCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             CCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            999999994 2   349999999996654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.4e-19  Score=171.92  Aligned_cols=145  Identities=20%  Similarity=0.154  Sum_probs=105.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++........ .                    .......+
T Consensus        11 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~~-~--------------------~~~~~~~~   61 (346)
T 1ua2_A           11 RYEKLDFLGEGQFATVYKARDKNT--------NQIVAIKKIKLGHRSEAK-D--------------------GINRTALR   61 (346)
T ss_dssp             --CEEEEEEEETTEEEEEEECSSC--------CSEEEEEEC---------------------------------CTHHHH
T ss_pred             ccEEEeEEeecCCEEEEEEEECCC--------CcEEEEEEEecCCcchhh-h--------------------hhhHHHHH
Confidence            499999999999999999998666        899999998753211000 0                    00112346


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.+|.+.+|  +..+.    ....+|||||++  |.....+..  ..++..++..++.|++.+|.+|| ..|||||
T Consensus        62 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~  136 (346)
T 1ua2_A           62 EIKLLQELSHPNI--IGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH-QHWILHR  136 (346)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECCTTCCEEEEECCS--EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH-HTTCCCC
T ss_pred             HHHHHhhCCCCCC--CeEEEEEeeCCceEEEEEcCC--CCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH-HCCEECC
Confidence            8999999976653  22332    245689999995  443333333  24788889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A          137 DLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             CCCHHHEEEcCCCCEEEEecccceec
Confidence            9999999995 689999999999764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.80  E-value=2.1e-19  Score=167.04  Aligned_cols=134  Identities=19%  Similarity=0.189  Sum_probs=100.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|..  +        |+.||||+++....                           ...  ..|
T Consensus        10 y~~~~~lg~G~~g~V~~~~~--~--------~~~vavK~~~~~~~---------------------------~~~--~~e   50 (301)
T 3q4u_A           10 ITLLECVGKGRYGEVWRGSW--Q--------GENVAVKIFSSRDE---------------------------KSW--FRE   50 (301)
T ss_dssp             CEEEEEEEECSSEEEEEEEE--T--------TEEEEEEEECGGGH---------------------------HHH--HHH
T ss_pred             EEEEEeeccCCCcEEEEEEE--C--------CEEEEEEEeccccc---------------------------hhh--HHH
Confidence            89999999999999999987  4        88999999864210                           011  123


Q ss_pred             HHHHHH--hhhCCCCccccccc--------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHH-----
Q psy10135        117 MRNLTR--MYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY-----  181 (351)
Q Consensus       117 ~~nL~r--L~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH-----  181 (351)
                      ...+..  +.+.+|  .+.+..        ...+|||||+. .|.....+....++...+..++.||+.+|.+||     
T Consensus        51 ~~~~~~~~l~h~ni--v~~~~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~  127 (301)
T 3q4u_A           51 TELYNTVMLRHENI--LGFIASDMTSRHSSTQLWLITHYHE-MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG  127 (301)
T ss_dssp             HHHHHHTCCCCTTB--CCEEEEEEEEETTEEEEEEEECCCT-TCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCS
T ss_pred             HHHHHHhhccCcCe--eeEEEeeccccCCCceeEEehhhcc-CCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            344433  554442  222221        23579999995 455555566667899999999999999999999     


Q ss_pred             ---hhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        182 ---NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       182 ---~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                         . .|||||||||.|||+. ++.++|+|||.|..
T Consensus       128 ~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  162 (301)
T 3q4u_A          128 TQGK-PAIAHRDLKSKNILVKKNGQCCIADLGLAVM  162 (301)
T ss_dssp             TTCB-CEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ccCC-CCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence               5 8999999999999995 68999999999854

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.80  E-value=4.8e-19  Score=171.83  Aligned_cols=142  Identities=18%  Similarity=0.172  Sum_probs=106.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||.|+||.||+|.+..+        |+.||||+++.....                        ........+|
T Consensus        44 y~~~~~lG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~------------------------~~~~~~~~~E   91 (371)
T 4exu_A           44 YVSPTHVGSGAYGSVCSAIDKRS--------GEKVAIKKLSRPFQS------------------------EIFAKRAYRE   91 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECSTTSS------------------------HHHHHHHHHH
T ss_pred             EEEEeEEecCCCeEEEEEEECCC--------CCEEEEEEecccccc------------------------hhHHHHHHHH
Confidence            78899999999999999998666        999999998753110                        0112234578


Q ss_pred             HHHHHHhhhCCC-Ccccccccc-------ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLK-------SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~-------~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|+++.+.+| .+...+...       ..+|||||++  |... .+....++...+..++.||+.+|.+|| ..||||
T Consensus        92 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~-~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH  167 (371)
T 4exu_A           92 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ--TDLQ-KIMGMEFSEEKIQYLVYQMLKGLKYIH-SAGVVH  167 (371)
T ss_dssp             HHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC--EEHH-HHTTSCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc--ccHH-HHhhcCCCHHHHHHHHHHHHHHHHHHH-HCCCcC
Confidence            999999977653 222222221       1289999995  5332 333445889999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.++|+|||.|...
T Consensus       168 ~Dikp~NIll~~~~~~kL~Dfg~a~~~  194 (371)
T 4exu_A          168 RDLKPGNLAVNEDCELKILDFGLARHA  194 (371)
T ss_dssp             SCCCGGGEEECTTCCEEECSTTCC---
T ss_pred             CCcCHHHeEECCCCCEEEEecCccccc
Confidence            99999999995 689999999999654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.80  E-value=1.5e-19  Score=167.00  Aligned_cols=144  Identities=18%  Similarity=0.182  Sum_probs=108.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        +..||||++.........                       ......+|
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e   59 (279)
T 3fdn_A           11 FEIGRPLGKGKFGNVYLAREKQS--------KFILALKVLFKAQLEKAG-----------------------VEHQLRRE   59 (279)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHHHT-----------------------CHHHHHHH
T ss_pred             EEEeeEEecCCCeEEEEEEEccC--------CcEEEEEEEeccccchhh-----------------------HHHHHHHH
Confidence            89999999999999999998666        889999998652211100                       01123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.+|  +..+..    ...++||||+. .|.....+.. ..++...+..++.||+.+|.+|| ..||||+||
T Consensus        60 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~i~H~dl  135 (279)
T 3fdn_A           60 VEIQSHLRHPNI--LRLYGYFHDATRVYLILEYAP-LGTVYRELQKLSKFDEQRTATYITELANALSYCH-SKRVIHRDI  135 (279)
T ss_dssp             HHHHTTCCCTTB--CCEEEEEECSSEEEEEECCCT-TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-TTTCEECCC
T ss_pred             HHHHHcCCCCCC--cchhheEecCCEEEEEEecCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCEecccC
Confidence            888888876653  333322    34589999995 3433333332 46888899999999999999999 599999999


Q ss_pred             CCCceEE-eCCeEEEEEccccccCC
Q psy10135        192 SEYNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+ .++.++|+|||.|....
T Consensus       136 kp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A          136 KPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             CGGGEEECTTSCEEECSCCEESCC-
T ss_pred             ChHhEEEcCCCCEEEEeccccccCC
Confidence            9999999 46899999999986543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.80  E-value=3.6e-19  Score=169.75  Aligned_cols=144  Identities=17%  Similarity=0.114  Sum_probs=107.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+     ...+..||||+++.....                         .......+|
T Consensus        51 y~i~~~lG~G~~g~V~~~~~~~~-----~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E  100 (325)
T 3kul_A           51 IHIEKIIGSGDSGEVCYGRLRVP-----GQRDVPVAIKALKAGYTE-------------------------RQRRDFLSE  100 (325)
T ss_dssp             EEEEEEEEETTTEEEEEEEECCT-----TSCCEEEEEEEECTTCCH-------------------------HHHHHHHHH
T ss_pred             eEEeeEEEeCCCcEEEEEEEecC-----CCCCceEEEEecCCCCCH-------------------------HHHHHHHHH
Confidence            89999999999999999998433     001456999998753110                         011223568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  +..+..    ...+|||||+. +|.....+..  ..++..++..++.||+.+|.+|| ..||||||
T Consensus       101 ~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~D  176 (325)
T 3kul_A          101 ASIMGQFDHPNI--IRLEGVVTRGRLAMIVTEYME-NGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS-DLGYVHRD  176 (325)
T ss_dssp             HHHHTTCCCTTB--CCEEEEECGGGCCEEEEECCT-TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHhCCCCCC--CcEEEEEEeCCccEEEeeCCC-CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCC
Confidence            899999876653  223321    44689999995 3344333432  46888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||++ ++.++|+|||.|...
T Consensus       177 lkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          177 LAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             CSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CCcceEEECCCCCEEECCCCccccc
Confidence            999999995 689999999999754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.79  E-value=2.2e-19  Score=174.91  Aligned_cols=144  Identities=17%  Similarity=0.165  Sum_probs=98.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~~~   77 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKT--------GLRVAVKKLSRPFQSI------------------------IHAKRTYR   77 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTT--------TEEEEEEECSSTTSSH------------------------HHHHHHHH
T ss_pred             ceEEeeEEeecCCeEEEEEEECCC--------CCEEEEEEeCccccCH------------------------HHHHHHHH
Confidence            389999999999999999998666        9999999986521100                        11122347


Q ss_pred             HHHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+..|+.|.+.+| .+...+.       ....+|||||+|  |.....+....++...+..++.||+.+|.+|| .+|||
T Consensus        78 E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~giv  154 (367)
T 2fst_X           78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG--ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SADII  154 (367)
T ss_dssp             HHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCC--EECC-----CCCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEecccC--CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCee
Confidence            8999999977653 2222221       134589999994  44444445567899999999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||++ ++.++|+|||.|...
T Consensus       155 H~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          155 HRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             CCCCCGGGEEECTTCCEEECC-------
T ss_pred             eCCCCHhhEEECCCCCEEEeeccccccc
Confidence            999999999995 689999999999754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.79  E-value=1.3e-19  Score=172.16  Aligned_cols=138  Identities=20%  Similarity=0.167  Sum_probs=105.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .         |+.||||+++....                           .....+.
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~-~---------~~~vavK~~~~~~~---------------------------~~~~~~~   67 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQL-L---------NEYVAVKIFPIQDK---------------------------QSWQNEY   67 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEE-T---------TEEEEEEEECGGGH---------------------------HHHHHHH
T ss_pred             hchhhheecccCceEEEEEEE-C---------CCEEEEEEeecCch---------------------------HHHHHHH
Confidence            389999999999999999987 3         78999999864210                           0112345


Q ss_pred             HHHHHHHhhhCCCCccccccc---c-----ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhC---
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL---K-----SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC---  184 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~---~-----~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~---  184 (351)
                      |+..|.+|.+.+|  .+.+..   .     ..+|||||+. .|.....+....++...+..++.|++.+|.+||+ .   
T Consensus        68 E~~~l~~l~hpni--v~~~~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~-~~~~  143 (322)
T 3soc_A           68 EVYSLPGMKHENI--LQFIGAEKRGTSVDVDLWLITAFHE-KGSLSDFLKANVVSWNELCHIAETMARGLAYLHE-DIPG  143 (322)
T ss_dssp             HHHTSTTCCCTTB--CCEEEEEEEECSSSEEEEEEEECCT-TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTC-CEEE
T ss_pred             HHHHHhcCCCCCc--hhhcceeccCCCCCceEEEEEecCC-CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh-hccc
Confidence            7777877766553  222221   1     2489999995 4455555566678999999999999999999994 7   


Q ss_pred             -------CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 -------HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 -------glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                             |||||||||.|||+. ++.++|+|||.|...
T Consensus       144 l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~  181 (322)
T 3soc_A          144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF  181 (322)
T ss_dssp             ETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred             cccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence                   999999999999995 579999999999543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.79  E-value=4.2e-19  Score=171.35  Aligned_cols=138  Identities=20%  Similarity=0.151  Sum_probs=104.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.....                              ...|
T Consensus        24 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~------------------------------~~~E   65 (342)
T 2qr7_A           24 YEVKEDIGVGSYSVCKRCIHKAT--------NMEFAVKIIDKSKRD------------------------------PTEE   65 (342)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEETTTCC------------------------------CHHH
T ss_pred             EEEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEcccCC------------------------------hHHH
Confidence            99999999999999999999666        999999999753110                              1246


Q ss_pred             HHHHHHh-hhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.++ .+.+| .+-..+.. ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+||||||||
T Consensus        66 ~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~-gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH-~~givHrDlk  143 (342)
T 2qr7_A           66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK-GGELLDKILRQKFFSEREASAVLFTITKTVEYLH-AQGVVHRDLK  143 (342)
T ss_dssp             HHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCC
T ss_pred             HHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcEeccCC
Confidence            7777777 34442 22222222 34589999995 3444444433 45889999999999999999999 5999999999


Q ss_pred             CCceEEeC--C---eEEEEEccccccC
Q psy10135        193 EYNMLVHK--A---TLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~~--g---~l~IIDFG~Av~~  214 (351)
                      |.|||+.+  +   .++|+|||.|...
T Consensus       144 p~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A          144 PSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             GGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             HHHEEEecCCCCcCeEEEEECCCcccC
Confidence            99999932  2   4999999999754

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.79  E-value=4.9e-19  Score=171.77  Aligned_cols=143  Identities=16%  Similarity=0.157  Sum_probs=105.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+|
T Consensus        27 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~------------------------~~~~~~~~E   74 (371)
T 2xrw_A           27 YQNLKPIGSGAQGIVCAAYDAIL--------ERNVAIKKLSRPFQNQ------------------------THAKRAYRE   74 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEECTTSSH------------------------HHHHHHHHH
T ss_pred             eeEeeeeEecCCEEEEEEEECCC--------CceEEEEEeccccCCh------------------------HHHHHHHHH
Confidence            89999999999999999998666        8999999987531100                        111223478


Q ss_pred             HHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +..|+.+.+.+| .+...+..       ...+|||||++  |.....+ ...++...+..++.||+.+|.+|| .+||||
T Consensus        75 ~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH  150 (371)
T 2xrw_A           75 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD--ANLCQVI-QMELDHERMSYLLYQMLCGIKHLH-SAGIIH  150 (371)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS--EEHHHHH-HSCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC--CCHHHHH-hhccCHHHHHHHHHHHHHHHHHHH-HCCeec
Confidence            899999876653 22222211       14589999995  5433333 346888899999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||.|||+. ++.++|+|||.|...+
T Consensus       151 ~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          151 RDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             SCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             ccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            99999999995 6899999999997543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.79  E-value=3.3e-19  Score=169.03  Aligned_cols=141  Identities=18%  Similarity=0.130  Sum_probs=103.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|..  .        |..||||+++......                      .  ......+
T Consensus        38 ~y~i~~~lG~G~~g~V~~~~~--~--------~~~vavK~~~~~~~~~----------------------~--~~~~~~~   83 (309)
T 3p86_A           38 DLNIKEKIGAGSFGTVHRAEW--H--------GSDVAVKILMEQDFHA----------------------E--RVNEFLR   83 (309)
T ss_dssp             GEEEEEEEEECSSEEEEEEEE--T--------TEEEEEEEECCCCCSH----------------------H--HHHHHHH
T ss_pred             HceeeeEeecCCCeEEEEEEE--C--------CCcEEEEEecCCCCCH----------------------H--HHHHHHH
Confidence            389999999999999999987  3        7899999987532110                      0  0112356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCC----CCHHHHHHHHHHHHHHHHHHHhhCC--
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTP----LTESGACKLYRECVVMMWRLYNKCH--  185 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~----l~~~~~~~l~~qll~~L~~LH~~~g--  185 (351)
                      |+..|.+|.+.+|  +..+..    ...+|||||+. .|.....+....    ++...+..++.||+.+|.+|| ..|  
T Consensus        84 E~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~  159 (309)
T 3p86_A           84 EVAIMKRLRHPNI--VLFMGAVTQPPNLSIVTEYLS-RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP  159 (309)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECSTTCCEEEEECCT-TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH-TSSSC
T ss_pred             HHHHHHhCCCCCE--eeEEEEEEECCceEEEEecCC-CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCC
Confidence            8999999977653  223322    34689999995 344433444332    788889999999999999999 589  


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||||||.|||+. ++.++|+|||.|...
T Consensus       160 ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  189 (309)
T 3p86_A          160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLK  189 (309)
T ss_dssp             CCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred             EECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence            99999999999995 579999999998643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.79  E-value=2.8e-19  Score=173.47  Aligned_cols=141  Identities=15%  Similarity=0.141  Sum_probs=106.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++.+...                           .....+
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~---------------------------~~~~~~   65 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLT--------KELVAVKYIERGAAI---------------------------DENVQR   65 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTT--------CCEEEEEEEESSTTS---------------------------CHHHHH
T ss_pred             cEEEEEEeccCCCEEEEEEEECCC--------CcEEEEEEEecCccc---------------------------cHHHHH
Confidence            499999999999999999999667        999999998753210                           011346


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.++++|.+.+|. +-..+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+||||||||
T Consensus        66 E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH-~~~ivH~Dlk  143 (361)
T 3uc3_A           66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS-GGELYERICNAGRFSEDEARFFFQQLLSGVSYCH-SMQICHRDLK  143 (361)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCCSCCCC
T ss_pred             HHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCC
Confidence            88999999776632 2222212 44589999995 344433333 346899999999999999999999 5999999999


Q ss_pred             CCceEEeC-C--eEEEEEcccccc
Q psy10135        193 EYNMLVHK-A--TLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~~-g--~l~IIDFG~Av~  213 (351)
                      |.|||++. +  .++|+|||.|..
T Consensus       144 p~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A          144 LENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             GGGEEECSSSSCCEEECCCCCC--
T ss_pred             HHHEEEcCCCCceEEEeecCcccc
Confidence            99999953 3  499999998863

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.79  E-value=4.6e-19  Score=169.32  Aligned_cols=142  Identities=17%  Similarity=0.109  Sum_probs=104.3

Q ss_pred             eeeecceeeecCceEEEEEEe-----CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASP-----GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVR  110 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~-----~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk  110 (351)
                      -|++.+.||.|+||.||+|.+     ..+        ++.||||+++.....                         ...
T Consensus        23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~--------~~~vavK~~~~~~~~-------------------------~~~   69 (359)
T 3vhe_A           23 RLKLGKPLGRGAFGQVIEADAFGIDKTAT--------CRTVAVKMLKEGATH-------------------------SEH   69 (359)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTC--------EEEEEEEEECTTCCH-------------------------HHH
T ss_pred             ceeeceeecCCCCceEEEEEecccccccc--------ceEEEEEEecCcCCH-------------------------HHH
Confidence            489999999999999999983     233        789999999753210                         001


Q ss_pred             HHHHHHHHHHHHh-hhCCCCccccccc-----cceEEEEcccCccccccccccc--------------------------
Q psy10135        111 TWAEKEMRNLTRM-YSEGLNVPKPILL-----KSHVLLMTFIGEDGWPAAKLKD--------------------------  158 (351)
Q Consensus       111 ~~aekE~~nL~rL-~~~gi~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~--------------------------  158 (351)
                      ....+|+..|.+| .+.+|  ...+..     ...++||||+. .|.....+..                          
T Consensus        70 ~~~~~E~~~l~~l~~hpni--v~~~~~~~~~~~~~~iv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (359)
T 3vhe_A           70 RALMSELKILIHIGHHLNV--VNLLGACTKPGGPLMVIVEFCK-FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP  146 (359)
T ss_dssp             HHHHHHHHHHHHHCCCTTB--CCEEEEECSTTSCCEEEEECCT-TEEHHHHHHTTTTSBCSCC-----------------
T ss_pred             HHHHHHHHHHHhhcCCcce--eeeeeeeecCCCceEEEEEecC-CCcHHHHHHhccccccccccccchhhcccccccccc
Confidence            1235799999999 44442  223321     23689999995 3333222221                          


Q ss_pred             -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        159 -----------------------------------------TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       159 -----------------------------------------~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                                                               ..++...+..++.||+.+|.+|| ..|||||||||.|||
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH-~~~ivH~Dikp~NIl  225 (359)
T 3vhe_A          147 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNIL  225 (359)
T ss_dssp             -------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEE
T ss_pred             hhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChhhEE
Confidence                                                     11777888999999999999999 599999999999999


Q ss_pred             Ee-CCeEEEEEccccccC
Q psy10135        198 VH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       198 i~-~g~l~IIDFG~Av~~  214 (351)
                      +. ++.++|+|||.|...
T Consensus       226 l~~~~~~kl~Dfg~a~~~  243 (359)
T 3vhe_A          226 LSEKNVVKICDFGLARDI  243 (359)
T ss_dssp             ECGGGCEEECCCGGGSCT
T ss_pred             EcCCCcEEEEeccceeee
Confidence            95 689999999999754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.79  E-value=4.4e-19  Score=165.87  Aligned_cols=142  Identities=19%  Similarity=0.179  Sum_probs=110.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++.....     .                    ......+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~-----~--------------------~~~~~~~   69 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRT--------QKVVAIKIIDLEEAE-----D--------------------EIEDIQQ   69 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEETTTCS-----T--------------------THHHHHH
T ss_pred             HHHHhhhhcccCCeEEEEEEECCC--------CcEEEEEEecccccH-----H--------------------HHHHHHH
Confidence            499999999999999999998666        899999998753210     0                    0112356


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.++.+.+|  +..+.    ....++||||++ .|.....+....++...+..++.||+.+|.+|| ..|++|+||
T Consensus        70 e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl  145 (303)
T 3a7i_A           70 EITVLSQCDSPYV--TKYYGSYLKDTKLWIIMEYLG-GGSALDLLEPGPLDETQIATILREILKGLDYLH-SEKKIHRDI  145 (303)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEEETTEEEEEEECCT-TEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHhCCCCCE--eEEEEEEecCCeEEEEEEeCC-CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCC
Confidence            8888988876653  23332    244589999995 344444455567899999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.|...
T Consensus       146 ~p~Nil~~~~~~~kl~Dfg~~~~~  169 (303)
T 3a7i_A          146 KAANVLLSEHGEVKLADFGVAGQL  169 (303)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ChheEEECCCCCEEEeecccceec
Confidence            99999995 689999999998654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.79  E-value=7.6e-19  Score=162.87  Aligned_cols=140  Identities=16%  Similarity=0.143  Sum_probs=107.2

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      --|++.+.||+|+||.||+|.+..+        |+.||||++.....    .                   .     ...
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~----~-------------------~-----~~~   52 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAA--------GEEVAIKLECVKTK----H-------------------P-----QLH   52 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTT--------TEEEEEEEEESCSS----C-------------------C-----HHH
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCC--------CcEEEEEEecCCcc----h-------------------h-----HHH
Confidence            3599999999999999999998666        99999999865210    0                   0     124


Q ss_pred             HHHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        115 KEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +|...+.++.+..+ +|....    ....+|||||++  |.....+.  ...++..++..++.||+.+|.+|| .+||||
T Consensus        53 ~e~~~l~~l~~~~~-i~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH  128 (296)
T 3uzp_A           53 IESKIYKMMQGGVG-IPTIRWCGAEGDYNVMVMELLG--PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH-SKNFIH  128 (296)
T ss_dssp             HHHHHHHHHTTSTT-CCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHHHhhcCCC-CCccccccCCCCceEEEEEecC--CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-hCCeee
Confidence            68888998876532 222221    134579999994  44433333  346889999999999999999999 599999


Q ss_pred             cCCCCCceEE----eCCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLV----HKATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi----~~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+    .++.++|+|||.|...
T Consensus       129 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A          129 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             SCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             CCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            9999999999    4578999999998754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.79  E-value=1.7e-19  Score=174.12  Aligned_cols=155  Identities=14%  Similarity=0.148  Sum_probs=104.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+   .....++.||||+++.....+......+.   ++            .......
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~~~~~e~~~~~---~~------------~~~~~~~   97 (364)
T 3op5_A           36 AWKVGLPIGQGGFGCIYLADMNSS---ESVGSDAPCVVKVEPSDNGPLFTELKFYQ---RA------------AKPEQIQ   97 (364)
T ss_dssp             EEEEEEECCCC-CCEEEEEEECCS---SCCCTTCSEEEEEEETTCHHHHHHHHHHH---HH------------CCHHHHH
T ss_pred             eEEEEEEEecCCCeEEEEeeecCc---cccccccceEEEEeeccchhHHHHHHHHH---hh------------hhhHHHH
Confidence            489999999999999999988332   11112588999998764322221111110   01            0111234


Q ss_pred             HHHHHHHhhhCCCCccccccc--------cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |+..+..+.+.+|  +..+..        ...+|||||+|  |.....+..  ..++..++..++.||+.+|.+|| ..|
T Consensus        98 e~~~~~~l~h~~i--v~~~~~~~~~~~~~~~~~lv~e~~g--~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH-~~~  172 (364)
T 3op5_A           98 KWIRTRKLKYLGV--PKYWGSGLHDKNGKSYRFMIMDRFG--SDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH-EHE  172 (364)
T ss_dssp             HHHHHTTCSCCCS--CCEEEEEEEEETTEEEEEEEEECEE--EEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHhhccCCCC--CeEEeeeeeccCCcceEEEEEeCCC--CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCC
Confidence            5555666655543  333322        22589999994  544333433  46899999999999999999999 589


Q ss_pred             ccccCCCCCceEEe---CCeEEEEEcccccc
Q psy10135        186 LVHADLSEYNMLVH---KATLFIIDVAQSVE  213 (351)
Q Consensus       186 lVH~DLkp~NILi~---~g~l~IIDFG~Av~  213 (351)
                      ||||||||.|||++   ++.++|+|||.|..
T Consensus       173 iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~  203 (364)
T 3op5_A          173 YVHGDIKASNLLLNYKNPDQVYLVDYGLAYR  203 (364)
T ss_dssp             EECCCCCGGGEEEESSCTTCEEECCCTTCEE
T ss_pred             eEEecCCHHHEEEecCCCCeEEEEECCccee
Confidence            99999999999995   47899999999954

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.79  E-value=7e-19  Score=173.17  Aligned_cols=143  Identities=15%  Similarity=0.207  Sum_probs=109.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||+|+++.....                          ......+|
T Consensus        53 y~i~~~LG~G~~g~Vy~~~~~~~--------~~~~a~K~~~~~~~~--------------------------~~~~~~~E   98 (387)
T 1kob_A           53 YDILEELGSGAFGVVHRCVEKAT--------GRVFVAKFINTPYPL--------------------------DKYTVKNE   98 (387)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECCSHH--------------------------HHHHHHHH
T ss_pred             eEEEEEEecCCCEEEEEEEECCC--------CCEEEEEEecccchh--------------------------hHHHHHHH
Confidence            89999999999999999999666        999999998753210                          01123578


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.+|. +-..+.. ...+|||||+. +|.....+..  ..++..++..++.||+.+|.+|| .+||||||||
T Consensus        99 ~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlk  176 (387)
T 1kob_A           99 ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS-GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDIK  176 (387)
T ss_dssp             HHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC-CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCC
T ss_pred             HHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC-CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccc
Confidence            9999988766532 2222211 44689999995 3444444433  35888999999999999999999 5999999999


Q ss_pred             CCceEEe---CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH---KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~---~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+.   .+.++|+|||.|....
T Consensus       177 p~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          177 PENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             GGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             hHHeEEecCCCCceEEEecccceecC
Confidence            9999995   3679999999997653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.79  E-value=3.1e-19  Score=164.59  Aligned_cols=145  Identities=19%  Similarity=0.235  Sum_probs=108.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....  . ..                    ......+|
T Consensus        13 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~--~-~~--------------------~~~~~~~e   61 (278)
T 3cok_A           13 FKVGNLLGKGSFAGVYRAESIHT--------GLEVAIKMIDKKAMY--K-AG--------------------MVQRVQNE   61 (278)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHH--H-TT--------------------CHHHHHHH
T ss_pred             ceeeeeecCCCceEEEEEEEccC--------CceEEEEEeehhhhh--h-hh--------------------HHHHHHHH
Confidence            89999999999999999998666        999999998752110  0 00                    01123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..+.++.+.+|  +..+..    ...++||||+. .|.....+..  ..++..++..++.||+.+|.+|| ..|++|+|
T Consensus        62 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~d  137 (278)
T 3cok_A           62 VKIHCQLKHPSI--LELYNYFEDSNYVYLVLEMCH-NGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH-SHGILHRD  137 (278)
T ss_dssp             HHHHTTBCCTTB--CCEEEEEECSSEEEEEEECCT-TEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSS
T ss_pred             HHHHHhCCCCCe--EeEEEEEccCCeEEEEEecCC-CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCC
Confidence            888888876653  223322    34579999995 3333333333  35888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHDH  216 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~~  216 (351)
                      |||.|||+. ++.++|+|||.+.....
T Consensus       138 l~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A          138 LTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             CCHHHEEEcCCCCEEEEeecceeeccC
Confidence            999999995 68999999999976643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.79  E-value=2.4e-19  Score=170.21  Aligned_cols=144  Identities=13%  Similarity=0.069  Sum_probs=104.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcE----EEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKE----FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~----vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.    ||+|++....    .... .   .++               
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~--------~~~~~~kv~~K~~~~~~----~~~~-~---~~~---------------   62 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPE--------GESIKIPVCIKVIEDKS----GRQS-F---QAV---------------   62 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCT--------TCSCCEEEEEEEECCTT----SCSC-B---CSC---------------
T ss_pred             HceeeeeeeecCCceEEEEEEcCC--------CceEEEEEEEEeccccc----cHHH-H---HHH---------------
Confidence            389999999999999999998555        555    6777664321    0000 0   011               


Q ss_pred             HHHHHHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        112 WAEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                        .+|+..+.++.+.+| .+-..+.....++||||+. .|.....+..  ..++...+..++.||+.+|.+|| .+||||
T Consensus        63 --~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH  138 (325)
T 3kex_A           63 --TDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLP-LGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE-EHGMVH  138 (325)
T ss_dssp             --CHHHHHHHTCCCTTBCCEEEEECBSSEEEEEECCT-TCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             --HHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEeCC-CCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH-hCCCCC
Confidence              247778888876653 2222222355689999995 4554444443  35788889999999999999999 599999


Q ss_pred             cCCCCCceEE-eCCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+ .++.++|+|||.|...
T Consensus       139 ~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A          139 RNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             SCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             CccchheEEECCCCeEEECCCCccccc
Confidence            9999999999 4689999999999754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.79  E-value=7.6e-19  Score=161.66  Aligned_cols=139  Identities=18%  Similarity=0.161  Sum_probs=106.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++....             +                 ..+
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~-------------~-----------------~~~   53 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRID--------GKTYVIKRVKYNNE-------------K-----------------AER   53 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTT--------CCEEEEEEEECCSG-------------G-----------------GHH
T ss_pred             ccceeeeeccCCceEEEEEEEcCC--------CeEEEEEEeccccH-------------H-----------------HHH
Confidence            389999999999999999999656        99999999875310             1                 135


Q ss_pred             HHHHHHHhhhCCCC-cccccc-----------------ccceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-----------------LKSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECV  174 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-----------------~~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll  174 (351)
                      |+..|.+|.+.+|. +...+.                 ....++||||+. .|.....+.   ...++...+..++.||+
T Consensus        54 e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~  132 (284)
T 2a19_B           54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCD-KGTLEQWIEKRRGEKLDKVLALELFEQIT  132 (284)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCC-SCBHHHHHHHGGGSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccC-CCCHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence            88888888766532 211111                 122579999995 334333332   24688888999999999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEE-eCCeEEEEEccccccC
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      .+|.+|| ..||||+||||.|||+ .++.++|+|||.|...
T Consensus       133 ~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  172 (284)
T 2a19_B          133 KGVDYIH-SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL  172 (284)
T ss_dssp             HHHHHHH-HTTEECSCCSGGGEEEEETTEEEECCCTTCEES
T ss_pred             HHHHHHH-hCCeeeccCCHHHEEEcCCCCEEECcchhheec
Confidence            9999999 5999999999999999 4689999999998654

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.79  E-value=1.7e-19  Score=170.98  Aligned_cols=143  Identities=15%  Similarity=0.123  Sum_probs=95.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++....   .  .               ..     ....+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~---~--~---------------~~-----~~~~~   52 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTT--------GVYVALKEVKLDSE---E--G---------------TP-----STAIR   52 (317)
T ss_dssp             -------------CEEEEEECSSS--------CCEEEEEEEECCST---T--C---------------SC-----HHHHH
T ss_pred             ceeEeeEECCCCCEEEEEEEECCC--------CcEEEEEEeecccc---c--c---------------cH-----HHHHH
Confidence            488999999999999999998666        99999999875320   0  0               00     11346


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc-------CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-------TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-------~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |+..|.+|.+.+|. +-..+.. ...+|||||++  |.....+..       ..++...+..++.||+.+|.+|| .+||
T Consensus        53 E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH-~~~i  129 (317)
T 2pmi_A           53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMD--NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-ENKI  129 (317)
T ss_dssp             HHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC--CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC--CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH-HCCe
Confidence            88999998776532 2112211 34589999995  533322221       24788889999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||.|||++ ++.++|+|||.|...
T Consensus       130 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A          130 LHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             eeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9999999999995 689999999999754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.79  E-value=7e-19  Score=162.86  Aligned_cols=140  Identities=15%  Similarity=0.130  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+......    .       .+                 ..+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~----~-------~~-----------------~~~   53 (296)
T 4hgt_A           10 RYRLGRKIGSGSFGDIYLGTDIAA--------GEEVAIKLECVKTK----H-------PQ-----------------LHI   53 (296)
T ss_dssp             -CEEEEEEEECSSSEEEEEEETTT--------TEEEEEEEEEC-------C-------CC-----------------HHH
T ss_pred             ceEEeeeecCCCCeEEEEEEEcCC--------CceEEEEeeccccc----c-------hH-----------------HHH
Confidence            499999999999999999998666        89999998664210    0       00                 245


Q ss_pred             HHHHHHHhhhCC-CCcccccc--ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEG-LNVPKPIL--LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~g-i~vP~pi~--~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |...+.++.+.. ++....+.  ....+|||||+|  |.....+.  ...++..++..++.||+.+|.+|| ..||||||
T Consensus        54 e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~D  130 (296)
T 4hgt_A           54 ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG--PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH-SKNFIHRD  130 (296)
T ss_dssp             HHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHHhcCCCCCCeeeeecCCCCceEEEEEccC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCC
Confidence            788888886543 22222111  134589999994  54433333  346889999999999999999999 59999999


Q ss_pred             CCCCceEE----eCCeEEEEEccccccC
Q psy10135        191 LSEYNMLV----HKATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi----~~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+    .++.++|+|||.|...
T Consensus       131 lkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A          131 VKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             CSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             CCHHHeeeeccCCCCeEEEecCccceec
Confidence            99999999    3578999999999754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.79  E-value=4.3e-19  Score=164.09  Aligned_cols=143  Identities=13%  Similarity=-0.013  Sum_probs=95.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++......                        ........
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~------------------------~~~~~~~~   55 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPS--------GQIMAVKRIRATVNSQ------------------------EQKRLLMD   55 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEC---CHH------------------------HHHHHHHH
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCC--------CeEEEEEEeecccCcH------------------------HHHHHHHH
Confidence            389999999999999999998666        9999999987531100                        00111112


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      +...+..+.+.+|  +..+.    ....+|||||++  |.....+.     ...++...+..++.||+.+|.+||..+|+
T Consensus        56 ~~~~~~~~~h~~i--v~~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i  131 (290)
T 3fme_A           56 LDISMRTVDCPFT--VTFYGALFREGDVWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV  131 (290)
T ss_dssp             HHHHHTTCCCTTB--CCEEEEEECSSSEEEEEECCS--EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHhCCCCeE--EEEeeeeeccCCEEEEEehhc--cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence            2223444444332  22222    245689999995  53322222     24688899999999999999999963499


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||.|||++ ++.++|+|||.|...
T Consensus       132 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A          132 IHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             CCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             ecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            9999999999996 589999999998654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.79  E-value=3.9e-19  Score=173.00  Aligned_cols=138  Identities=15%  Similarity=0.116  Sum_probs=102.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||++.....       +.                       .+
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~--------~~~vAiK~~~~~~~-------~~-----------------------~~   49 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIES--------GKRFALKKVLQDPR-------YK-----------------------NR   49 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTT--------CCEEEEEEEECCTT-------SC-----------------------CH
T ss_pred             eEEEEEEEEeccCEEEEEEEECCC--------CCEEEEEEEecCcc-------hH-----------------------HH
Confidence            499999999999999999998667        99999998865311       00                       14


Q ss_pred             HHHHHHHhhhCCCC-ccccc---------------------------------------cccceEEEEcccCcccccccc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPI---------------------------------------LLKSHVLLMTFIGEDGWPAAK  155 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi---------------------------------------~~~~~vLVMEfig~~G~~~~~  155 (351)
                      |+..|+.|.+.+|. +-..+                                       .....+|||||++  |.....
T Consensus        50 E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~  127 (383)
T 3eb0_A           50 ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP--DTLHKV  127 (383)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS--EEHHHH
T ss_pred             HHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC--ccHHHH
Confidence            77777777655431 11111                                       0012569999995  433222


Q ss_pred             cc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        156 LK-----DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       156 L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      +.     ...++...+..++.||+.+|.+|| .+|||||||||.|||++  ++.++|+|||.|...
T Consensus       128 l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  192 (383)
T 3eb0_A          128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL  192 (383)
T ss_dssp             HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCCGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCcCccCccCHHHEEEcCCCCcEEEEECCCCccc
Confidence            22     246888899999999999999999 59999999999999995  589999999999753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.79  E-value=2e-19  Score=171.28  Aligned_cols=143  Identities=15%  Similarity=0.065  Sum_probs=106.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......                        ......+|
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~------------------------~~~~~~~E   83 (329)
T 3gbz_A           36 YRRITKLGEGTYGEVYKAIDTVT--------NETVAIKRIRLEHEEEG------------------------VPGTAIRE   83 (329)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------TEEEEEEECCCCC--------------------------------CHHH
T ss_pred             EEEEEEEEecCCeEEEEEEECCC--------CceEEEEEEcccccccc------------------------cchhHHHH
Confidence            99999999999999999998666        99999999875321100                        01112368


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.+|.+.+|. +-..+.. ...+|||||++  |.....+.. ..++...+..++.||+.+|.+|| .+|||||||||
T Consensus        84 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH-~~~ivH~Dlkp  160 (329)
T 3gbz_A           84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE--NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH-SRRCLHRDLKP  160 (329)
T ss_dssp             HHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS--EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCG
T ss_pred             HHHHHHcCCCCcceEEEEEecCCEEEEEEecCC--CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-hCCEECCCCCH
Confidence            8899988766532 2122222 34579999994  544444433 35888999999999999999999 59999999999


Q ss_pred             CceEEeC------CeEEEEEccccccC
Q psy10135        194 YNMLVHK------ATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~~------g~l~IIDFG~Av~~  214 (351)
                      .|||+..      +.++|+|||.|...
T Consensus       161 ~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          161 QNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             GGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             HHEEEecCCCCccceEEECcCCCcccc
Confidence            9999942      35999999999654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.79  E-value=3.6e-19  Score=170.78  Aligned_cols=147  Identities=19%  Similarity=0.212  Sum_probs=109.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhcccccc--ccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVN--GEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~--ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......   .+..  ...+|                 .
T Consensus        26 y~~~~~lG~G~~g~Vy~a~~~~~--------~~~vavK~~~~~~~~~~---~~~~~~~~~~~-----------------~   77 (335)
T 3dls_A           26 YSTMSPLGSGAFGFVWTAVDKEK--------NKEVVVKFIKKEKVLED---CWIEDPKLGKV-----------------T   77 (335)
T ss_dssp             EEEEEECSSSSSCSEEEEEETTT--------TEEEEEEEEESTTSCTT---SEEEETTTEEE-----------------E
T ss_pred             eEEEeEEEecCCEEEEEEEECCC--------CcEEEEEEEehhhcccc---cccchHHHHHH-----------------H
Confidence            99999999999999999998666        99999999986432111   0000  00011                 2


Q ss_pred             HHHHHHHHhhhCCCCccccccc----cceEEEEcccCccc-cccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        115 KEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDG-WPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G-~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +|+..|.+|.+.+|  ++.+..    ...+|||||++ .| .....+.. ..++...+..++.||+.+|.+|| ..||||
T Consensus        78 ~E~~~l~~l~h~~I--v~~~~~~~~~~~~~lv~e~~~-~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH  153 (335)
T 3dls_A           78 LEIAILSRVEHANI--IKVLDIFENQGFFQLVMEKHG-SGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-LKDIIH  153 (335)
T ss_dssp             HHHHHHTTCCCTTB--CCEEEEEECSSEEEEEEECCT-TSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHHhCCCCCE--eeEEEEEeeCCEEEEEEEeCC-CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEE
Confidence            58888988876653  233322    34579999996 44 43333433 35888999999999999999999 589999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||.|||+. ++.++|+|||.|....
T Consensus       154 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~  181 (335)
T 3dls_A          154 RDIKDENIVIAEDFTIKLIDFGSAAYLE  181 (335)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             eccCHHHEEEcCCCcEEEeecccceECC
Confidence            99999999995 6899999999997553

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.79  E-value=1.2e-18  Score=163.81  Aligned_cols=146  Identities=14%  Similarity=0.154  Sum_probs=109.5

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      .+-.|.+.+.||+|+||.||+|.+ .+        |+.||||+++......                        .....
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~--------~~~vavK~~~~~~~~~------------------------~~~~~   72 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLN-EK--------KQIYAIKYVNLEEADN------------------------QTLDS   72 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEC-TT--------CCEEEEEEEECSSCCH------------------------HHHHH
T ss_pred             ccceEEEEEEecCCCCEEEEEEEc-CC--------CcEEEEEEeccccccc------------------------cchHH
Confidence            345699999999999999999998 56        8999999987532110                        01122


Q ss_pred             HHHHHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        113 AEKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      ..+|+..|.+|.+..-.+...+..    ...+||||+.  +|.....+.. ..++..++..++.||+.+|.+|| ..|||
T Consensus        73 ~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~iv  149 (313)
T 3cek_A           73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG--NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-QHGIV  149 (313)
T ss_dssp             HHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCC--SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCce
Confidence            356889999997521123333322    3457999966  3544444433 45888899999999999999999 59999


Q ss_pred             ccCCCCCceEEeCCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVHKATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+.++.++|+|||.|...
T Consensus       150 H~dlkp~NIl~~~~~~kL~Dfg~~~~~  176 (313)
T 3cek_A          150 HSDLKPANFLIVDGMLKLIDFGIANQM  176 (313)
T ss_dssp             CCCCCGGGEEEETTEEEECCCSSSCC-
T ss_pred             ecCCCcccEEEECCeEEEeeccccccc
Confidence            999999999999999999999999754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.79  E-value=1.1e-19  Score=176.54  Aligned_cols=146  Identities=9%  Similarity=0.038  Sum_probs=97.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++.....-..                       ......+
T Consensus        74 ~y~~~~~lG~G~~g~V~~a~~~~~--------~~~vavK~~~~~~~~~~~-----------------------~~~~~~~  122 (377)
T 3byv_A           74 TLVRGTVLGQEDPYAYLEATDQET--------GESFEVHVPYFTERPPSN-----------------------AIKQMKE  122 (377)
T ss_dssp             EEEEEEEEEEETTEEEEEEEC-CC--------CCEEEEEEEEECC-CCTT-----------------------HHHHHHH
T ss_pred             eEEEcceeecCCCEEEEEEEECCC--------CcEEEEEEEeeccccchH-----------------------HHHHHHH
Confidence            388899999999999999998666        999999999753110000                       0011123


Q ss_pred             HH-----------HHHHHhhhCCCCccccccc------------------cceEEEEcccCccccccccccc-CCCC---
Q psy10135        116 EM-----------RNLTRMYSEGLNVPKPILL------------------KSHVLLMTFIGEDGWPAAKLKD-TPLT---  162 (351)
Q Consensus       116 E~-----------~nL~rL~~~gi~vP~pi~~------------------~~~vLVMEfig~~G~~~~~L~~-~~l~---  162 (351)
                      |+           .|+.+++...+.....+..                  ...+|||||++  |.....+.. ..++   
T Consensus       123 E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~--g~L~~~l~~~~~~~~~~  200 (377)
T 3byv_A          123 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ--SNLQTFGEVLLSHSSTH  200 (377)
T ss_dssp             HHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCS--EEHHHHHHHHHHTTTTT
T ss_pred             HHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccC--CCHHHHHHhcccccccc
Confidence            33           3444443221110111110                  13679999994  654443332 1233   


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        163 ----ESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       163 ----~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                          ...+..++.||+.+|.+|| .+|||||||||.|||+. ++.++|+|||+|...+
T Consensus       201 ~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~  257 (377)
T 3byv_A          201 KSLVHHARLQLTLQVIRLLASLH-HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  257 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             ccccHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEEechhheecC
Confidence                3566779999999999999 59999999999999995 6899999999997543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.79  E-value=4.6e-19  Score=170.98  Aligned_cols=139  Identities=22%  Similarity=0.275  Sum_probs=101.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        ++.||||+++...    ..                        ....+|
T Consensus        55 y~~~~~lG~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~----~~------------------------~~~~~E   98 (349)
T 2w4o_A           55 FEVESELGRGATSIVYRCKQKGT--------QKPYALKVLKKTV----DK------------------------KIVRTE   98 (349)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEC--------------------------------------
T ss_pred             EEEeeEEeeCCCEEEEEEEECCC--------CcEEEEEEeccch----hH------------------------HHHHHH
Confidence            89999999999999999999666        8999999987531    00                        012358


Q ss_pred             HHHHHHhhhCCCCcccccc---c-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL---L-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~---~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  +..+.   . ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+|||||||
T Consensus        99 ~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Di  174 (349)
T 2w4o_A           99 IGVLLRLSHPNI--IKLKEIFETPTEISLVLELVT-GGELFDRIVEKGYYSERDAADAVKQILEAVAYLH-ENGIVHRDL  174 (349)
T ss_dssp             CHHHHHCCCTTB--CCEEEEEECSSEEEEEECCCC-SCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCC
T ss_pred             HHHHHhCCCCCC--cceeeeEecCCeEEEEEEeCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEecCC
Confidence            888999877653  22222   1 34579999995 3444344433 35888999999999999999999 599999999


Q ss_pred             CCCceEEe----CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+.    ++.++|+|||.|....
T Consensus       175 kp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          175 KPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CGGGEEESSSSTTCCEEECCCC------
T ss_pred             CcccEEEecCCCCCCEEEccCccccccC
Confidence            99999995    6789999999987543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.79  E-value=3.8e-19  Score=168.58  Aligned_cols=146  Identities=21%  Similarity=0.184  Sum_probs=106.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+...   .....++.||||+++.....                         .......+
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   99 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGL---LPYEPFTMVAVKMLKEEASA-------------------------DMQADFQR   99 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETS---STTSSEEEEEEEECCTTCCH-------------------------HHHHHHHH
T ss_pred             HCeeeeeeeecCCeeEEEEEecCc---CCCCCceeEEEEEeccccCH-------------------------HHHHHHHH
Confidence            489999999999999999987421   00011589999998753110                         01122457


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-------------------------CCCCHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-------------------------TPLTESGA  166 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-------------------------~~l~~~~~  166 (351)
                      |+..|.+|.+.+|  +..+..    ...+|||||+. .|.....+..                         ..++..++
T Consensus       100 E~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  176 (343)
T 1luf_A          100 EAALMAEFDNPNI--VKLLGVCAVGKPMCLLFEYMA-YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQ  176 (343)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHTCC----------------------CCCCHHHH
T ss_pred             HHHHHHhCCCCCE--EEEEEEEccCCceEEEEecCC-CCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHH
Confidence            8999999976653  233322    45689999995 3333332322                         35788889


Q ss_pred             HHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        167 CKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       167 ~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ..++.||+.+|.+|| .+|||||||||.|||++ ++.++|+|||.|..
T Consensus       177 ~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  223 (343)
T 1luf_A          177 LCIARQVAAGMAYLS-ERKFVHRDLATRNCLVGENMVVKIADFGLSRN  223 (343)
T ss_dssp             HHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCSCHHH
T ss_pred             HHHHHHHHHHHHHHH-hCCeecCCCCcceEEECCCCeEEEeecCCCcc
Confidence            999999999999999 59999999999999995 68999999999854

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.79  E-value=1e-18  Score=166.83  Aligned_cols=136  Identities=18%  Similarity=0.241  Sum_probs=102.5

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      .+.||+|+||.||+|.+..+        |+.||||++....                             .....+|+..
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~-----------------------------~~~~~~e~~~   58 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKS--------NQAFAVKIISKRM-----------------------------EANTQKEITA   58 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTT--------CCEEEEEEEEGGG-----------------------------HHHHHHHHHH
T ss_pred             CCccccCCCeEEEEEEECCC--------CCEEEEEEEChhh-----------------------------hhhHHHHHHH
Confidence            37899999999999999666        9999999986421                             0112468888


Q ss_pred             HHHhh-hCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        120 LTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       120 L~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      |.++. +.+| .+-..+.. ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| .+|||||||||.|
T Consensus        59 l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~N  136 (325)
T 3kn6_A           59 LKLCEGHPNIVKLHEVFHDQLHTFLVMELLN-GGELFERIKKKKHFSETEASYIMRKLVSAVSHMH-DVGVVHRDLKPEN  136 (325)
T ss_dssp             HHHTTTCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGG
T ss_pred             HHHhcCCCCeeEEEEEEEcCCEEEEEEEccC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCHHH
Confidence            88886 4443 22222222 34579999995 3444444433 45899999999999999999999 5999999999999


Q ss_pred             eEEeC-C---eEEEEEccccccC
Q psy10135        196 MLVHK-A---TLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi~~-g---~l~IIDFG~Av~~  214 (351)
                      ||+.. +   .++|+|||.|...
T Consensus       137 Ill~~~~~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A          137 LLFTDENDNLEIKIIDFGFARLK  159 (325)
T ss_dssp             EEEEC----CEEEECCCTTCEEC
T ss_pred             EEEecCCCcccEEEeccccceec
Confidence            99954 3   7999999999754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.79  E-value=3.6e-19  Score=178.34  Aligned_cols=144  Identities=18%  Similarity=0.195  Sum_probs=109.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||++........                  .     ......+|
T Consensus        28 y~~~~~lg~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~------------------~-----~~~~~~~E   76 (484)
T 3nyv_A           28 YKGQRVLGKGSFGEVILCKDKIT--------GQECAVKVISKRQVKQK------------------T-----DKESLLRE   76 (484)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEETTTCCBS------------------S-----CHHHHHHH
T ss_pred             eEEeeEEecCCCEEEEEEEECCC--------CCEEEEEEEEhhhcccc------------------h-----HHHHHHHH
Confidence            99999999999999999999667        99999999875321100                  0     01223568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  ++.+..    ...++||||+. +|.....+. ...++..++..++.||+.+|.+|| ..|||||||
T Consensus        77 ~~~l~~l~hpni--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dl  152 (484)
T 3nyv_A           77 VQLLKQLDHPNI--MKLYEFFEDKGYFYLVGEVYT-GGELFDEIISRKRFSEVDAARIIRQVLSGITYMH-KNKIVHRDL  152 (484)
T ss_dssp             HHHHTTCCCTTB--CCEEEEEECSSEEEEEECCCC-SCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhCCCCCC--CcEEEEEEeCCEEEEEEecCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCC
Confidence            999999977653  233322    34589999995 444444443 346888999999999999999999 599999999


Q ss_pred             CCCceEEe----CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+.    ++.++|+|||.|....
T Consensus       153 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          153 KPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             CGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             CHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            99999993    4789999999986543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.79  E-value=5.4e-19  Score=172.02  Aligned_cols=149  Identities=14%  Similarity=0.067  Sum_probs=105.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+... .......+..||||+++.....                         .......+
T Consensus        82 ~~~~~~~LG~G~fg~Vy~a~~~~~-~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~  135 (370)
T 2psq_A           82 KLTLGKPLGEGCFGQVVMAEAVGI-DKDKPKEAVTVAVKMLKDDATE-------------------------KDLSDLVS  135 (370)
T ss_dssp             GEEEEEEESCCSSSEEEEEEEETC-STTCTTCEEEEEEEECCTTCBH-------------------------HHHHHHHH
T ss_pred             HCEeeeEEeeCCCeeEEEEEEecc-cCcCcCcceeEEEEEecCCcCH-------------------------HHHHHHHH
Confidence            388999999999999999986211 0000112568999998753100                         01112457


Q ss_pred             HHHHHHHh-hhCCCCcccccc----ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYREC  173 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~ql  173 (351)
                      |+..|.+| .+.+|  +..+.    ....+|||||+. .|.....+..                 ..++..++..++.||
T Consensus       136 E~~~l~~l~~hpnI--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  212 (370)
T 2psq_A          136 EMEMMKMIGKHKNI--INLLGACTQDGPLYVIVEYAS-KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL  212 (370)
T ss_dssp             HHHHHHHSCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCE--eeEEEEEccCCCEEEEEEcCC-CCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHH
Confidence            89999999 55543  22332    245689999995 3433322221                 246788899999999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| .+|||||||||.|||+. ++.++|+|||.|...
T Consensus       213 ~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  253 (370)
T 2psq_A          213 ARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDI  253 (370)
T ss_dssp             HHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             HHHHHHHH-hCCeeccccchhhEEECCCCCEEEccccCCccc
Confidence            99999999 59999999999999995 689999999999754

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.79  E-value=2.7e-19  Score=170.13  Aligned_cols=141  Identities=14%  Similarity=0.095  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++...... ..       .++                 .+|
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~-~~-------~~~-----------------~~E   50 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLT--------DNLVALKEIRLEHEEG-AP-------CTA-----------------IRE   50 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECC-------C-------CCC-----------------CCC
T ss_pred             eEEEEEEcCCCCEEEEEEEECCC--------CcEEEEEEEecccccc-cc-------hhH-----------------HHH
Confidence            89999999999999999998666        8999999987532100 00       011                 136


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  +..+.    ....+|||||++  |.....+..  ..++...+..++.||+.+|.+|| ..||||||
T Consensus        51 ~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~D  125 (324)
T 3mtl_A           51 VSLLKDLKHANI--VTLHDIIHTEKSLTLVFEYLD--KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH-RQKVLHRD  125 (324)
T ss_dssp             HHHHSCCCCTTB--CCEEEEEECSSCEEEEEECCS--EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEEESS
T ss_pred             HHHHHhcCCCCC--CeeeeEEeeCCEEEEEecccc--cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCC
Confidence            778888876553  22332    244589999995  544443432  34788889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       126 ikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A          126 LKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             CCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             cCHHHEEECCCCCEEEccCccccccc
Confidence            999999995 6899999999987543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.79  E-value=6.1e-19  Score=163.90  Aligned_cols=147  Identities=17%  Similarity=0.117  Sum_probs=110.8

Q ss_pred             hcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         32 SRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        32 ~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      ..|..|.+...||+|+||.||+|.+..+        +..||+|+++......                        ....
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~--------~~~va~k~~~~~~~~~------------------------~~~~   70 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTET--------TVEVAWCELQDRKLTK------------------------SERQ   70 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEGGGSCH------------------------HHHH
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCC--------ceEEEEEEecchhhCH------------------------HHHH
Confidence            4566799999999999999999998666        8999999987532110                        1112


Q ss_pred             HHHHHHHHHHHhhhCCCCccccccc--------cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      ...+|+..|.+|.+.+|  +..+..        ...++||||+. .|.....+.. ..++...+..++.||+.+|.+|| 
T Consensus        71 ~~~~e~~~l~~l~h~~i--v~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-  146 (290)
T 1t4h_A           71 RFKEEAEMLKGLQHPNI--VRFYDSWESTVKGKKCIVLVTELMT-SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH-  146 (290)
T ss_dssp             HHHHHHHHHTTCCCTTB--CCEEEEEEEESSSCEEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHhCCCCCe--eeeeeeeccccCCCceEEEEEEecC-CCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-
Confidence            23568899998876653  222221        23579999995 3343333333 46888899999999999999999 


Q ss_pred             hCC--ccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        183 KCH--LVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~g--lVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      ..|  +||+||||.|||+.  ++.++|+|||.|...
T Consensus       147 ~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            488  99999999999995  579999999999644

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.79  E-value=7.4e-19  Score=162.82  Aligned_cols=149  Identities=15%  Similarity=0.070  Sum_probs=108.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        ++.||||+++.........  ..                 .......+
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~--~~-----------------~~~~~~~~   72 (287)
T 4f0f_A           20 EIEYEKQIGKGGFGLVHKGRLVKD--------KSVVAIKSLILGDSEGETE--MI-----------------EKFQEFQR   72 (287)
T ss_dssp             TEEEEEECCCCSSSCEEEEEETTT--------CCEEEEEECCCCTTTCCHH--HH-----------------CCSHHHHH
T ss_pred             cceehhccccCCceeEEEEEEcCC--------ceEEEEEEeeccccccchh--HH-----------------HHHHHHHH
Confidence            389999999999999999998666        9999999987532111000  00                 00012357


Q ss_pred             HHHHHHHhhhCCCCcccccc--ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCC--cccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCH--LVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~g--lVH~  189 (351)
                      |+..|.++.+.+|  ++.+.  ....++||||+. .|.....+.  ...++...+..++.|++.+|.+|| ..|  +||+
T Consensus        73 E~~~l~~l~h~~i--~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH-~~~~~ivH~  148 (287)
T 4f0f_A           73 EVFIMSNLNHPNI--VKLYGLMHNPPRMVMEFVP-CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR  148 (287)
T ss_dssp             HHHHHTTCCCTTB--CCEEEEETTTTEEEEECCT-TCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH-TSSSCCBCS
T ss_pred             HHHHHHhCCCCCc--hhhheeecCCCeEEEEecC-CCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH-hCCCCeecC
Confidence            8999998876653  22222  244589999995 344434443  235888899999999999999999 589  9999


Q ss_pred             CCCCCceEEe-CCe-----EEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KAT-----LFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g~-----l~IIDFG~Av~~~  215 (351)
                      ||||.|||+. ++.     ++|+|||.|....
T Consensus       149 dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~  180 (287)
T 4f0f_A          149 DLRSPNIFLQSLDENAPVCAKVADFGLSQQSV  180 (287)
T ss_dssp             CCSGGGEEESCCCTTCSCCEEECCCTTCBCCS
T ss_pred             CCCcceEEEeccCCCCceeEEeCCCCcccccc
Confidence            9999999995 344     9999999997543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.79  E-value=7.3e-19  Score=163.73  Aligned_cols=142  Identities=20%  Similarity=0.133  Sum_probs=105.6

Q ss_pred             eeeecceeeecCceEEEEEE----eCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHAS----PGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~----~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      .|++.+.||.|+||.||+|.    +..+        |+.||||+++....     ..                    ...
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~--------~~~vavK~~~~~~~-----~~--------------------~~~   68 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNT--------GEQVAVKSLKPESG-----GN--------------------HIA   68 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSC--------SEEEEEEEEC----------C--------------------CHH
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCcc--------CeEEEEEEeccccc-----ch--------------------hHH
Confidence            38999999999999999998    3234        89999999875310     00                    001


Q ss_pred             HHHHHHHHHHHhhhCCCCccccccc------cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ...+|+..|.+|.+.+|  +..+..      ...++||||+. .|.....+.  ...++..++..++.||+.+|.+|| .
T Consensus        69 ~~~~E~~~l~~l~h~~i--~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH-~  144 (302)
T 4e5w_A           69 DLKKEIEILRNLYHENI--VKYKGICTEDGGNGIKLIMEFLP-SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG-S  144 (302)
T ss_dssp             HHHHHHHHHHTCCCTTB--CCEEEEEEC---CCEEEEEECCT-TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHhCCCCCe--eeeeeEEecCCCceEEEEEEeCC-CCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh-c
Confidence            23568999999977653  222221      33579999995 333333332  235888899999999999999999 5


Q ss_pred             CCccccCCCCCceEE-eCCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      .|+||+||||.|||+ .++.++|+|||.|...
T Consensus       145 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             TTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCcccCCCchheEEEcCCCCEEECcccccccc
Confidence            999999999999999 5789999999999754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.79  E-value=9.6e-19  Score=163.48  Aligned_cols=148  Identities=15%  Similarity=0.090  Sum_probs=107.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+...   .....++.||||+++.....                         .......+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   75 (313)
T 1t46_A           24 RLSFGKTLGAGAFGKVVEATAYGL---IKSDAAMTVAVKMLKPSAHL-------------------------TEREALMS   75 (313)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESS---SSTTCEEEEEEEEECTTCCH-------------------------HHHHHHHH
T ss_pred             hhhHHHhhCccCCcceEEEEEeec---cccchhhhhHHHhcCcchhH-------------------------HHHHHHHH
Confidence            489999999999999999984110   00012789999999763210                         01122457


Q ss_pred             HHHHHHHh-hhCCCCcccccc----ccceEEEEcccCcccccccccccC-------------------CCCHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKDT-------------------PLTESGACKLYR  171 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~~-------------------~l~~~~~~~l~~  171 (351)
                      |+..|.+| .+.+|  ++.+.    ....+|||||+. .|.....+...                   .++..++..++.
T Consensus        76 E~~~l~~l~~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (313)
T 1t46_A           76 ELKVLSYLGNHMNI--VNLLGACTIGGPTLVITEYCC-YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY  152 (313)
T ss_dssp             HHHHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHH
T ss_pred             HHHHHhhcccCCCe--eeEEEEEecCCCcEEEEecCC-CCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHH
Confidence            89999999 55553  23332    245689999995 33333333221                   378889999999


Q ss_pred             HHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        172 ECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       172 qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||+.+|.+|| .+||||+||||.|||+. ++.++|+|||.|....
T Consensus       153 qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  196 (313)
T 1t46_A          153 QVAKGMAFLA-SKNCIHRDLAARNILLTHGRITKICDFGLARDIK  196 (313)
T ss_dssp             HHHHHHHHHH-HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTT
T ss_pred             HHHHHHHHHH-HCCeecCCCccceEEEcCCCCEEEcccccccccc
Confidence            9999999999 59999999999999995 6899999999997653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.79  E-value=1.3e-18  Score=168.15  Aligned_cols=146  Identities=19%  Similarity=0.115  Sum_probs=109.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+.+.||+|+||.||+|.+..+        |+.||||+++......                       ........+
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~--------~~~vaiK~~~~~~~~~-----------------------~~~~~~~~~  103 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRN--------SEVVAIKKMSYSGKQS-----------------------NEKWQDIIK  103 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEESCSSCH-----------------------HHHHHHHHH
T ss_pred             heeeeeEEccCCCEEEEEEEEccC--------CeEEEEEEEccccccc-----------------------hHHHHHHHH
Confidence            389999999999999999998666        9999999987532100                       011122357


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.+|.+.+|. +-..+. ....+|||||+.  |.....+.  ...++..++..++.|++.+|.+|| .+|||||||
T Consensus       104 E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~--g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dl  180 (348)
T 1u5q_A          104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL--GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDV  180 (348)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS--EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCC
T ss_pred             HHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCC
Confidence            89999999766532 111111 244579999994  54443332  346888999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+. ++.++|+|||.|....
T Consensus       181 kp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          181 KAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             SGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             CHHHEEECCCCCEEEeeccCceecC
Confidence            99999996 5899999999997543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.79  E-value=9.7e-19  Score=166.44  Aligned_cols=144  Identities=19%  Similarity=0.176  Sum_probs=106.6

Q ss_pred             eeeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         36 VSEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        36 ~y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      .|.+. +.||+|+||.||+|.+..+        |+.||||+++.......                        ......
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~------------------------~~~~~~   76 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKST--------GQEYAAKFLKKRRRGQD------------------------CRAEIL   76 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEESEETTEE------------------------CHHHHH
T ss_pred             EEeeccceeCCCCCeEEEEEEECCC--------CCEEEEEEEehhhcchH------------------------HHHHHH
Confidence            36776 8999999999999999666        99999999976321000                        011235


Q ss_pred             HHHHHHHHhhh-CCCCccccccc----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        115 KEMRNLTRMYS-EGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       115 kE~~nL~rL~~-~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      +|+..|.++.. .+  ++..+..    ...+|||||+. .|.....+..   ..++..++..++.||+.+|.+|| .+||
T Consensus        77 ~e~~~l~~l~~~~~--iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH-~~gi  152 (327)
T 3lm5_A           77 HEIAVLELAKSCPR--VINLHEVYENTSEIILILEYAA-GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH-QNNI  152 (327)
T ss_dssp             HHHHHHHHTTTCTT--BCCEEEEEECSSEEEEEEECCT-TEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHHhccCCCC--EEEEEEEEEeCCeEEEEEEecC-CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-HCCe
Confidence            68888888854 33  2233322    34589999995 3433333322   35888999999999999999999 5999


Q ss_pred             cccCCCCCceEEe----CCeEEEEEccccccCC
Q psy10135        187 VHADLSEYNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       187 VH~DLkp~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      |||||||.|||+.    ++.++|+|||.|....
T Consensus       153 vH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~  185 (327)
T 3lm5_A          153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG  185 (327)
T ss_dssp             ECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred             ecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence            9999999999995    3799999999997654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.79  E-value=4.2e-19  Score=168.07  Aligned_cols=138  Identities=22%  Similarity=0.248  Sum_probs=100.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|..  +        |+.||||+++....                           .....+.
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~--~--------~~~vavK~~~~~~~---------------------------~~~~~e~   56 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSL--D--------ERPVAVKVFSFANR---------------------------QNFINEK   56 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEE--T--------TEEEEEEEEEGGGH---------------------------HHHHHHH
T ss_pred             HhheeeecccCCCeEEEEEEE--C--------CeEEEEEEeeccch---------------------------hhHHHHH
Confidence            389999999999999999976  4        88999999864210                           0111233


Q ss_pred             HHHHHHHhhhCCCCcccccc---------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhC--
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL---------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC--  184 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~---------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~--  184 (351)
                      |+..+..+.+.+|  ...+.         ....+|||||+. .|.....+....++...+..++.||+.+|.+||. .  
T Consensus        57 ~~~~~~~~~h~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~  132 (336)
T 3g2f_A           57 NIYRVPLMEHDNI--ARFIVGDERVTADGRMEYLLVMEYYP-NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHT-ELP  132 (336)
T ss_dssp             HHHTSTTCCCTTB--CCEEEEEEEECTTSCEEEEEEECCCT-TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHC-CBC
T ss_pred             HHHHHHhccCcch--hhheecccccccCCCceEEEEEecCC-CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHh-hhc
Confidence            3333333444432  22221         113479999995 4455455555667888889999999999999994 7  


Q ss_pred             -------CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 -------HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 -------glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                             |||||||||.|||+. ++.++|+|||.|...
T Consensus       133 ~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~  170 (336)
T 3g2f_A          133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL  170 (336)
T ss_dssp             CGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cccccccceeecccccceEEEcCCCcEEEeeccceeec
Confidence                   999999999999995 589999999999654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.79  E-value=1.8e-19  Score=169.97  Aligned_cols=145  Identities=16%  Similarity=0.156  Sum_probs=97.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCC---cEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELE---KEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g---~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      -|++.+.||+|+||.||+|.+..+        +   ..||||+++.......                        ....
T Consensus        24 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~~~vavK~~~~~~~~~~------------------------~~~~   71 (323)
T 3qup_A           24 QFTLGRMLGKGEFGSVREAQLKQE--------DGSFVKVAVKMLKADIIASS------------------------DIEE   71 (323)
T ss_dssp             -CEEEEEEEEETTEEEEEEEC---------------CEEEEEEC------CH------------------------HHHH
T ss_pred             HeEEeceecccCCeEEEEEEEccc--------CCcceeEEEEEecccccCHH------------------------HHHH
Confidence            389999999999999999987443        3   3899999875321100                        0112


Q ss_pred             HHHHHHHHHHhhhCCCC-ccccccc-cc------eEEEEcccCccccccccccc-------CCCCHHHHHHHHHHHHHHH
Q psy10135        113 AEKEMRNLTRMYSEGLN-VPKPILL-KS------HVLLMTFIGEDGWPAAKLKD-------TPLTESGACKLYRECVVMM  177 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~-vP~pi~~-~~------~vLVMEfig~~G~~~~~L~~-------~~l~~~~~~~l~~qll~~L  177 (351)
                      ..+|+..|++|.+.+|. +-..+.. ..      .++||||+. .|.....+..       ..++..++..++.||+.+|
T Consensus        72 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al  150 (323)
T 3qup_A           72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMK-HGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM  150 (323)
T ss_dssp             HHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCT-TCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEecc-CCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHH
Confidence            35789999998766532 2111111 11      289999995 3333322221       1478889999999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .+|| ..|+|||||||.|||+. ++.++|+|||.|...
T Consensus       151 ~~LH-~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~  187 (323)
T 3qup_A          151 EYLS-SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI  187 (323)
T ss_dssp             HHHH-HTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred             HHHH-cCCcccCCCCcceEEEcCCCCEEEeeccccccc
Confidence            9999 59999999999999995 579999999999654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.78  E-value=5.5e-19  Score=173.06  Aligned_cols=143  Identities=21%  Similarity=0.258  Sum_probs=107.1

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -.|.+.+.||.|+||.||+|.+..+        |+.||||+++....  ..                  .     .....
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~--~~------------------~-----~~~~~   55 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKT--------GDLFAIKVFNNISF--LR------------------P-----VDVQM   55 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECGGGG--GS------------------C-----HHHHH
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCC--------CcEEEEEEeccccc--cc------------------h-----HHHHH
Confidence            3599999999999999999999666        99999999874210  00                  0     01124


Q ss_pred             HHHHHHHHhhhCCCCccccccc------cceEEEEcccCcccccccccccC----CCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        115 KEMRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKDT----PLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       115 kE~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~~----~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +|+..|.+|.+.+|  +..+..      ...+|||||+. .|.....+...    .++...+..++.||+.+|.+|| .+
T Consensus        56 ~E~~~l~~l~hpnI--v~~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~  131 (396)
T 4eut_A           56 REFEVLKKLNHKNI--VKLFAIEEETTTRHKVLIMEFCP-CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-EN  131 (396)
T ss_dssp             HHHHHHHHCCCTTB--CCEEEEEECTTTCCEEEEECCCT-TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHHHhcCCCCC--CeEEEeeccCCCCeeEEEEecCC-CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH-HC
Confidence            68999999977653  222221      24589999994 34333333321    2888999999999999999999 59


Q ss_pred             CccccCCCCCceEE----eC-CeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLV----HK-ATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi----~~-g~l~IIDFG~Av~~  214 (351)
                      |||||||||.|||+    .. +.++|+|||.|...
T Consensus       132 ~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~  166 (396)
T 4eut_A          132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL  166 (396)
T ss_dssp             TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred             CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence            99999999999998    32 46999999999754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.78  E-value=6.7e-19  Score=166.66  Aligned_cols=147  Identities=19%  Similarity=0.206  Sum_probs=109.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.........                    ........+|
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~--------------------~~~~~~~~~E   65 (321)
T 2a2a_A           14 YDIGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRR--------------------GVSREEIERE   65 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEBCSSSSCSS--------------------SBCHHHHHHH
T ss_pred             EEEeeEeeecCCEEEEEEEECCC--------CeEEEEEEEeccccccccc--------------------chhHHHHHHH
Confidence            89999999999999999998666        9999999998642111000                    0011224578


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  +..+..    ...++||||+. +|.....+.. ..++...+..++.||+.+|.+|| ..|+||+||
T Consensus        66 ~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH-~~~ivH~di  141 (321)
T 2a2a_A           66 VSILRQVLHHNV--ITLHDVYENRTDVVLILELVS-GGELFDFLAQKESLSEEEATSFIKQILDGVNYLH-TKKIAHFDL  141 (321)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEECSSEEEEEECCCC-SCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHhCCCCCc--ceEEEEEecCCEEEEEEEcCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCC
Confidence            999999977653  233322    34689999994 3333333333 35788899999999999999999 599999999


Q ss_pred             CCCceEEe-CC----eEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KA----TLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g----~l~IIDFG~Av~~~  215 (351)
                      ||.|||+. ++    .++|+|||.|....
T Consensus       142 kp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A          142 KPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             SGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             ChHHEEEecCCCCcCCEEEccCccceecC
Confidence            99999995 34    79999999997653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.78  E-value=3.2e-19  Score=179.27  Aligned_cols=144  Identities=16%  Similarity=0.205  Sum_probs=108.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++.......                   .     .....+|
T Consensus        24 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~-------------------~-----~~~~~~E   71 (486)
T 3mwu_A           24 YNIVCMLGKGSFGEVLKCKDRIT--------QQEYAVKVINKASAKNK-------------------D-----TSTILRE   71 (486)
T ss_dssp             EEEEEEEECCSSSEEEEEEETTT--------CCEEEEEEEEHHHHBCS-------------------C-----HHHHHHH
T ss_pred             eEEeEEEeecCCEEEEEEEECCC--------CCEEEEEEEecccccch-------------------H-----HHHHHHH
Confidence            99999999999999999999667        99999999875211000                   0     1123579


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|++|.+.+|. +-..+.. ...++||||+. +|.....+. ...++..++..++.||+.+|.+|| .+|||||||||
T Consensus        72 ~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp  149 (486)
T 3mwu_A           72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYT-GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH-KHNIVHRDLKP  149 (486)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSG
T ss_pred             HHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCch
Confidence            9999999776632 2222222 34579999995 344433332 356889999999999999999999 59999999999


Q ss_pred             CceEEe----CCeEEEEEccccccC
Q psy10135        194 YNMLVH----KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~----~g~l~IIDFG~Av~~  214 (351)
                      .|||+.    ++.++|+|||.|...
T Consensus       150 ~Nil~~~~~~~~~~kl~Dfg~a~~~  174 (486)
T 3mwu_A          150 ENILLESKEKDCDIKIIDFGLSTCF  174 (486)
T ss_dssp             GGEEESSSSTTCCEEECSCSCTTTB
T ss_pred             HHEEEecCCCCCCEEEEECCcCeEC
Confidence            999994    357999999998644

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.78  E-value=7.8e-19  Score=163.50  Aligned_cols=145  Identities=17%  Similarity=0.128  Sum_probs=106.2

Q ss_pred             eeeecc-eeeecCceEEEEEEe--CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         36 VSEVNG-CISTGKEANVYHASP--GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        36 ~y~I~~-~Ig~G~~a~VY~a~~--~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      -|.+.+ .||+|+||.||+|..  ..+        ++.||||+++.....                        ......
T Consensus        17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~--------~~~vavK~~~~~~~~------------------------~~~~~~   64 (291)
T 1xbb_A           17 LLTLEDKELGSGNFGTVKKGYYQMKKV--------VKTVAVKILKNEAND------------------------PALKDE   64 (291)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSS--------EEEEEEEEEC-----------------------------CHHHHH
T ss_pred             hhhhccCccccccCeeeEeeeecCCCc--------eeeEEEEeecccccC------------------------HHHHHH
Confidence            378887 999999999999954  233        789999999753210                        011223


Q ss_pred             HHHHHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        113 AEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       113 aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      ..+|+..|.+|.+.+| ++...+.....++||||+. .|.....+.. ..++..++..++.||+.+|.+|| ..|+||+|
T Consensus        65 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~d  142 (291)
T 1xbb_A           65 LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAE-LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRD  142 (291)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCT-TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCC-CCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH-hCCeEcCC
Confidence            4578999999876653 2222223355689999995 3333333333 35888899999999999999999 59999999


Q ss_pred             CCCCceEE-eCCeEEEEEccccccC
Q psy10135        191 LSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+ .++.++|+|||.|...
T Consensus       143 ikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A          143 LAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             CSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCcceEEEeCCCcEEEccCCcceee
Confidence            99999999 5789999999998755

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.78  E-value=3.8e-19  Score=186.43  Aligned_cols=141  Identities=21%  Similarity=0.245  Sum_probs=107.1

Q ss_pred             eeecceeeecCceEEEEEEeCC-CcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGA-NYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~-~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |++.++||.|+||.||+|.+.. +        |+.||||++.....                         ........+
T Consensus        82 y~i~~~lg~G~~g~Vy~a~~~~~~--------~~~vaiK~~~~~~~-------------------------~~~~~~~~~  128 (681)
T 2pzi_A           82 YEVKGCIAHGGLGWIYLALDRNVN--------GRPVVLKGLVHSGD-------------------------AEAQAMAMA  128 (681)
T ss_dssp             EEEEEEEEEETTEEEEEEEEGGGT--------TEEEEEEESCSSCC-------------------------HHHHHHHHH
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCC--------CcEEEEEEeCccCC-------------------------HHHHHHHHH
Confidence            9999999999999999999843 4        89999998864210                         011122356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cc-----eEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KS-----HVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~-----~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |...|.+|.+.+|  +..+..    ..     .+|||||++  |..+..+....++..++..++.||+.+|.+|| ..||
T Consensus       129 E~~~l~~l~hp~i--v~~~~~~~~~~~~~~~~~~lv~E~~~--g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH-~~gi  203 (681)
T 2pzi_A          129 ERQFLAEVVHPSI--VQIFNFVEHTDRHGDPVGYIVMEYVG--GQSLKRSKGQKLPVAEAIAYLLEILPALSYLH-SIGL  203 (681)
T ss_dssp             HHGGGGGCCCTTB--CCEEEEEEEECTTSCEEEEEEEECCC--CEECC----CCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHhcCCCCc--CeEeeeEeecCCCCCceeEEEEEeCC--CCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-HCCC
Confidence            8888888877653  333322    12     489999994  44444443347899999999999999999999 5999


Q ss_pred             cccCCCCCceEEeCCeEEEEEccccccCC
Q psy10135        187 VHADLSEYNMLVHKATLFIIDVAQSVEHD  215 (351)
Q Consensus       187 VH~DLkp~NILi~~g~l~IIDFG~Av~~~  215 (351)
                      |||||||.|||+..+.++|+|||.|....
T Consensus       204 iHrDlkp~NIll~~~~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          204 VYNDLKPENIMLTEEQLKLIDLGAVSRIN  232 (681)
T ss_dssp             ECCCCSGGGEEECSSCEEECCCTTCEETT
T ss_pred             eecccChHHeEEeCCcEEEEecccchhcc
Confidence            99999999999988899999999997553

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.78  E-value=8.1e-19  Score=165.43  Aligned_cols=140  Identities=19%  Similarity=0.233  Sum_probs=105.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++.....                           .....+
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~---------------------------~~~~~~   69 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKT--------GQLAAIKVMDVTGDE---------------------------EEEIKQ   69 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECCSST---------------------------THHHHH
T ss_pred             cEEEEEEeccCCCEEEEEEEECCC--------CCeEEEEEEecCccc---------------------------HHHHHH
Confidence            499999999999999999998666        999999998753210                           011346


Q ss_pred             HHHHHHHh-hhCCCCccccccc----------cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      |+..|.++ .+.+|  +..+..          ...+|||||++ .|.....+..   ..++...+..++.||+.+|.+||
T Consensus        70 e~~~l~~l~~h~~i--~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  146 (326)
T 2x7f_A           70 EINMLKKYSHHRNI--ATYYGAFIKKNPPGMDDQLWLVMEFCG-AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH  146 (326)
T ss_dssp             HHHHHHHHCCSTTB--CCEEEEEEECC--CCCCEEEEEEECCT-TEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCCe--eeeeeEEeeccCccccceEEEEEEcCC-CCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            88888888 45443  222221          24589999995 3333333332   35888889999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..||||+||||.|||+. ++.++|+|||.+...
T Consensus       147 -~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  179 (326)
T ss_dssp             -HTTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred             -HCCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence             59999999999999995 689999999998754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.78  E-value=1.2e-18  Score=159.88  Aligned_cols=141  Identities=17%  Similarity=0.171  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.||||+++.....                         .......+|
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~-------------------------~~~~~~~~e   55 (276)
T 2yex_A            9 WDLVQTLGEGAYGEVQLAVNRVT--------EEAVAVKIVDMKRAV-------------------------DCPENIKKE   55 (276)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEEGGGCT-------------------------THHHHHHHH
T ss_pred             eEEEEEeecCCCcEEEEEEECCC--------CcEEEEEEeeeccch-------------------------hhhHHHHHH
Confidence            89999999999999999998666        899999998752110                         001123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.+|  ++.+..    ...++||||+. .|.....+.. ..++..++..++.|++.+|.+|| .+|++|+||
T Consensus        56 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl  131 (276)
T 2yex_A           56 ICINKMLNHENV--VKFYGHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDI  131 (276)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEEETTEEEEEEECCT-TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred             HHHHHhcCCCCc--eeeeeEEEcCCEEEEEEEecC-CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCC
Confidence            888888876653  233322    34579999995 3344344443 35888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       132 ~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A          132 KPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ChHHEEEccCCCEEEeeCCCcccc
Confidence            99999995 589999999998643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.78  E-value=3.4e-19  Score=172.45  Aligned_cols=145  Identities=15%  Similarity=0.135  Sum_probs=96.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.......                       ........|
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~-----------------------~~~~~~~~E  112 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVER--------LEDFALKVFTMGAENSR-----------------------SELERLHEA  112 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEECCSTTHH-----------------------HHHHHHHHH
T ss_pred             eeeeeeccCCCCEEEEEEEECCC--------CceeEEEEEEecccccc-----------------------cHHHHHHHH
Confidence            88999999999999999998666        99999999987421100                       011112345


Q ss_pred             HHHHHHhh--hCCC-------Ccc-cccc------------------ccceEEEEcccCccccccccccc--CCCCHHHH
Q psy10135        117 MRNLTRMY--SEGL-------NVP-KPIL------------------LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGA  166 (351)
Q Consensus       117 ~~nL~rL~--~~gi-------~vP-~pi~------------------~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~  166 (351)
                      ...+..|.  +.++       .+| ..+.                  ....+|||||++  |.+...+..  ..++....
T Consensus       113 ~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~  190 (371)
T 3q60_A          113 TFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS--VDLELLFSTLDFVYVFRGD  190 (371)
T ss_dssp             HHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS--EEHHHHHHHHHHSCCCCHH
T ss_pred             HHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC--CCHHHHHHHhccccchhhh
Confidence            44444443  2221       011 0110                  023589999995  554444432  12333233


Q ss_pred             ------HHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        167 ------CKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       167 ------~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                            ..++.||+.+|.+|| .+|||||||||.|||++ ++.++|+|||.|...+
T Consensus       191 ~~~~vk~~i~~qi~~aL~~LH-~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~  245 (371)
T 3q60_A          191 EGILALHILTAQLIRLAANLQ-SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG  245 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HTTEEETTCSGGGEEECTTSCEEECCGGGEEETT
T ss_pred             hhhhhHHHHHHHHHHHHHHHH-HCCCccCcCCHHHEEECCCCCEEEEecceeeecC
Confidence                  456699999999999 59999999999999995 6899999999997654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.78  E-value=9.5e-19  Score=165.79  Aligned_cols=143  Identities=19%  Similarity=0.092  Sum_probs=107.5

Q ss_pred             eeeecceeeecCceEEEEEEe----CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASP----GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~----~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||.|+||.||+|..    ..+        |+.||||+++.....                          ...
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~--------~~~vavK~~~~~~~~--------------------------~~~   69 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNT--------GALVAVKQLQHSGPD--------------------------QQR   69 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSC--------SEEEEEEEESSCCHH--------------------------HHH
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCc--------ceEEEEEEeccCCHH--------------------------HHH
Confidence            389999999999999999983    334        889999998753210                          011


Q ss_pred             HHHHHHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      ...+|+..|.+|.+.+|.....+.    ....+|||||+. +|.....+..  ..++...+..++.||+.+|.+|| ..|
T Consensus        70 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~  147 (327)
T 3lxl_A           70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP-SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG-SRR  147 (327)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCT-TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecC-CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence            235789999999776543221111    133579999995 3433333332  35888999999999999999999 599


Q ss_pred             ccccCCCCCceEE-eCCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||+||||.|||+ .++.++|+|||.|...
T Consensus       148 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          148 CVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             ccCCCCChhhEEECCCCCEEEcccccceec
Confidence            9999999999999 5789999999999754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.78  E-value=6.7e-19  Score=164.62  Aligned_cols=147  Identities=19%  Similarity=0.118  Sum_probs=105.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.+...   .....+..||||+++....                       ..  ......+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~~~~~~vavK~~~~~~~-----------------------~~--~~~~~~~   75 (314)
T 2ivs_A           24 NLVLGKTLGEGEFGKVVKATAFHL---KGRAGYTTVAVKMLKENAS-----------------------PS--ELRDLLS   75 (314)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEETG---GGCSSEEEEEEEECCTTCC-----------------------HH--HHHHHHH
T ss_pred             heeeeeeecccCCeeEEEEEEecc---CcccCcceEEEEeccCCCC-----------------------HH--HHHHHHH
Confidence            389999999999999999986221   0001168899999875310                       00  0112356


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-------------------------CCCCHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-------------------------TPLTESGA  166 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-------------------------~~l~~~~~  166 (351)
                      |+..|.+|.+.+|  ++.+.    ....++||||+. .|.....+..                         ..++..++
T Consensus        76 E~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (314)
T 2ivs_A           76 EFNVLKQVNHPHV--IKLYGACSQDGPLLLIVEYAK-YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL  152 (314)
T ss_dssp             HHHHHTTCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHTTTSTTEEC----------------CEECHHHH
T ss_pred             HHHHHhhCCCCce--eeEEEEEecCCceEEEEeecC-CCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHH
Confidence            8999998876653  22222    245689999995 3333222221                         12677889


Q ss_pred             HHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        167 CKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       167 ~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..++.||+.+|.+|| .+|||||||||.|||+. ++.++|+|||.|...
T Consensus       153 ~~i~~qi~~~l~~lH-~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~  200 (314)
T 2ivs_A          153 ISFAWQISQGMQYLA-EMKLVHRDLAARNILVAEGRKMKISDFGLSRDV  200 (314)
T ss_dssp             HHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTEEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHH-HCCCcccccchheEEEcCCCCEEEccccccccc
Confidence            999999999999999 59999999999999996 579999999999754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.78  E-value=1.1e-18  Score=167.60  Aligned_cols=141  Identities=18%  Similarity=0.145  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |..||+|+++....                         ........+|
T Consensus        35 y~~~~~lg~G~~g~V~~~~~~~~--------~~~va~K~~~~~~~-------------------------~~~~~~~~~E   81 (360)
T 3eqc_A           35 FEKISELGAGNGGVVFKVSHKPS--------GLVMARKLIHLEIK-------------------------PAIRNQIIRE   81 (360)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEECCCC-------------------------HHHHHHHHHH
T ss_pred             ceeeeeecCCCCeEEEEEEECCC--------CcEEEEEEeccccC-------------------------HHHHHHHHHH
Confidence            99999999999999999999666        99999999876310                         0111234568


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+.+|  +..+.    ....+|||||+. .|.....+.. ..++...+..++.+++.+|.+||+++|||||||
T Consensus        82 ~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dl  158 (360)
T 3eqc_A           82 LQVLHECNSPYI--VGFYGAFYSDGEISICMEHMD-GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV  158 (360)
T ss_dssp             HGGGGGCCCTTB--CCEEEEEEETTEEEEEECCCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             HHHHHHCCCCCE--EEEeEEEEECCEEEEEEECCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCc
Confidence            888888876553  23332    134589999994 2333333332 368888899999999999999996569999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||.|||+. ++.++|+|||.|..
T Consensus       159 kp~Nil~~~~~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          159 KPSNILVNSRGEIKLCDFGVSGQ  181 (360)
T ss_dssp             SGGGEEECTTCCEEECCCCCCHH
T ss_pred             cHHHEEECCCCCEEEEECCCCcc
Confidence            99999995 68999999998853

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.78  E-value=4.3e-19  Score=165.36  Aligned_cols=140  Identities=16%  Similarity=0.134  Sum_probs=100.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+           ...+|||+++......                        .......+
T Consensus        25 ~y~~~~~lG~G~~g~Vy~~~~-----------~~~vavK~~~~~~~~~------------------------~~~~~~~~   69 (289)
T 3og7_A           25 QITVGQRIGSGSFGTVYKGKW-----------HGDVAVKMLNVTAPTP------------------------QQLQAFKN   69 (289)
T ss_dssp             SCEEEEEEEECSSEEEEEEES-----------SSEEEEEEESCSSCCH------------------------HHHHHHHH
T ss_pred             ceeeeeEecCCCCeEEEEEEE-----------cCceEEEEEeccCCCH------------------------HHHHHHHH
Confidence            389999999999999999987           3469999987532111                        01112356


Q ss_pred             HHHHHHHhhhCCCCcccccc---ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL---LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~---~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..|+++.+.+|.  ..+.   ....++||||+. .|.....+.  ...++..++..++.||+.+|.+|| ..|+||||
T Consensus        70 E~~~l~~l~h~~iv--~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH-~~~i~H~D  145 (289)
T 3og7_A           70 EVGVLRKTRHVNIL--LFMGYSTAPQLAIVTQWCE-GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH-AKSIIHRD  145 (289)
T ss_dssp             HHHHHTTCCCTTBC--CEEEEECSSSCEEEEECCC-EEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH-HTTCCCSC
T ss_pred             HHHHHHhCCCCcEE--EEEeeccCCccEEEEEecC-CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-hCCccccc
Confidence            88999988776542  2222   245689999995 333333332  235888889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       146 lkp~Nil~~~~~~~kl~Dfg~~~~~  170 (289)
T 3og7_A          146 LKSNNIFLHEDNTVKIGDFGLATEK  170 (289)
T ss_dssp             CCGGGEEEETTTEEEECCCC-----
T ss_pred             CccceEEECCCCCEEEccceecccc
Confidence            999999995 689999999998644

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.78  E-value=5.2e-19  Score=182.10  Aligned_cols=145  Identities=19%  Similarity=0.126  Sum_probs=108.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....  ...                     .......|
T Consensus       187 f~~~~~LG~G~fG~Vy~a~~~~t--------g~~vAiK~l~k~~~~--~~~---------------------~~~~~~~E  235 (543)
T 3c4z_A          187 FLDFRVLGRGGFGEVFACQMKAT--------GKLYACKKLNKKRLK--KRK---------------------GYQGAMVE  235 (543)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEEHHHHH--HTT---------------------CHHHHHHH
T ss_pred             eEEEEEEeeCCCeEEEEEEECCC--------CcEEEEEEEEhHHhh--hhH---------------------HHHHHHHH
Confidence            89999999999999999998666        999999998753211  000                     01123468


Q ss_pred             HHHHHHhhhCCCCcc-ccccc-cceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVP-KPILL-KSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~~-~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ..+|.++.+.+|... ..+.. ...+|||||+. +|.....+..     ..++...+..++.||+.+|.+|| .+|||||
T Consensus       236 ~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~-gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH-~~gIvHr  313 (543)
T 3c4z_A          236 KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN-GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYR  313 (543)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT-TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH-HTTEECC
T ss_pred             HHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc-CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH-HcCCccc
Confidence            899999877654221 11111 44689999995 3443333332     25888899999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||++ +|.++|+|||+|...
T Consensus       314 DLKP~NILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          314 DLKPENVLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCChHHEEEeCCCCEEEeecceeeec
Confidence            9999999995 689999999999654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.78  E-value=9.7e-19  Score=172.25  Aligned_cols=138  Identities=18%  Similarity=0.233  Sum_probs=101.8

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |.+. ++||.|+||.||+|.+..+        |+.||||+++...                               ...+
T Consensus        63 y~~~~~~LG~G~~g~V~~~~~~~~--------~~~vAiK~~~~~~-------------------------------~~~~  103 (400)
T 1nxk_A           63 YKVTSQVLGLGINGKVLQIFNKRT--------QEKFALKMLQDCP-------------------------------KARR  103 (400)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECSH-------------------------------HHHH
T ss_pred             ceeccceeeeccCeEEEEEEECCC--------CCEEEEEEeCcch-------------------------------hHHH
Confidence            5665 7899999999999999667        9999999986421                               1234


Q ss_pred             HHHHHHHhh-hCCC-Ccccccc-----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        116 EMRNLTRMY-SEGL-NVPKPIL-----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       116 E~~nL~rL~-~~gi-~vP~pi~-----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |+..+.++. +.+| .+-..+.     ....+|||||+. +|.....+..   ..++..++..++.||+.+|.+|| .+|
T Consensus       104 E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~  181 (400)
T 1nxk_A          104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD-GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH-SIN  181 (400)
T ss_dssp             HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC-SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC-CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCC
Confidence            666665553 3332 2222221     123579999995 3444444443   24888999999999999999999 599


Q ss_pred             ccccCCCCCceEEe----CCeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      ||||||||.|||+.    ++.++|+|||.|....
T Consensus       182 ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  215 (400)
T ss_dssp             EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence            99999999999995    5789999999997653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.78  E-value=9.9e-19  Score=161.78  Aligned_cols=140  Identities=14%  Similarity=0.138  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                           ......+|
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~---------------------------~~~~~~~E   52 (303)
T 1zy4_A            8 FEEIAVLGQGAFGQVVKARNALD--------SRYYAIKKIRHTEE---------------------------KLSTILSE   52 (303)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEEEHH---------------------------HHHHHHHH
T ss_pred             chhhheeccCCcEEEEEEEEcCC--------CeEEEEEEEeccHH---------------------------HHHHHHHH
Confidence            89999999999999999998666        99999999864210                           01123468


Q ss_pred             HHHHHHhhhCCCCcccccc-----------------ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLNVPKPIL-----------------LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMM  177 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~-----------------~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L  177 (351)
                      +..|.++.+.++.  ..+.                 ....++||||+. +|.....+..  ..++...+..++.||+.+|
T Consensus        53 ~~~l~~l~h~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  129 (303)
T 1zy4_A           53 VMLLASLNHQYVV--RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE-NGTLYDLIHSENLNQQRDEYWRLFRQILEAL  129 (303)
T ss_dssp             HHHHTTCCCTTBC--CEEEEEEECCCCCC------CEEEEEEEEECCC-SCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCchHHH--HHHHHHHhhcchhhhhcccccCCceEEEEecCC-CCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence            8888888766532  1111                 234579999995 3343333332  2466778889999999999


Q ss_pred             HHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        178 WRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       178 ~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .+|| .+|+||+||||.|||+. ++.++|+|||.|....
T Consensus       130 ~~LH-~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A          130 SYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             HHHH-HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             HHHH-hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence            9999 59999999999999995 6889999999997653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.78  E-value=3.6e-19  Score=173.28  Aligned_cols=141  Identities=20%  Similarity=0.183  Sum_probs=107.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|....+        |+.||||+++..... ....       +                 ..+|
T Consensus       116 ~~~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~-~~~~-------~-----------------~~~E  162 (377)
T 3cbl_A          116 LVLGEQIGRGNFGEVFSGRLRAD--------NTLVAVKSCRETLPP-DLKA-------K-----------------FLQE  162 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEECCTTSCH-HHHT-------T-----------------TTHH
T ss_pred             eEEeeEeccCCCCeEEEEEEecC--------CeEEEEEEccccCCH-HHHH-------H-----------------HHHH
Confidence            78899999999999999998656        899999998753210 0000       1                 2358


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  +..+..    ...+|||||+. +|.....+..  ..++...+..++.||+.+|.+|| ..|+||||
T Consensus       163 ~~~l~~l~hpni--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrD  238 (377)
T 3cbl_A          163 ARILKQYSHPNI--VRLIGVCTQKQPIYIVMELVQ-GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE-SKCCIHRD  238 (377)
T ss_dssp             HHHHTTCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHhCCCCCE--EEEEEEEecCCCcEEEEEcCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcCCcc
Confidence            888988876653  223322    34689999995 3444433432  34888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       239 lkp~Nil~~~~~~~kl~DfG~s~~~  263 (377)
T 3cbl_A          239 LAARNCLVTEKNVLKISDFGMSREE  263 (377)
T ss_dssp             CSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             cCHHHEEEcCCCcEEECcCCCceec
Confidence            999999995 689999999998653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.78  E-value=2e-18  Score=160.45  Aligned_cols=151  Identities=20%  Similarity=0.228  Sum_probs=110.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchh-hhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILV-FKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~-fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -|.+.+.||+|++|.||+|.+..+        |+.||||+++..... +..                  ......+....
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~------------------~~~~~~~~~~~   71 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPT--------CKEYAVKIIDVTGGGSFSA------------------EEVQELREATL   71 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEETTCSTTCCH------------------HHHHHHHHHHH
T ss_pred             ccceeeeecCCCceEEEEEEEcCc--------CceEEEEEEecccccccCH------------------HHHHHHHHHHH
Confidence            389999999999999999999666        899999999764210 000                  00112233356


Q ss_pred             HHHHHHHHhh-hCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        115 KEMRNLTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       115 kE~~nL~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +|+..|.++. +.+| ++-..+.. ...+|||||+. .|.....+.. ..++...+..++.||+.+|.+|| ..|++|+|
T Consensus        72 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~d  149 (298)
T 1phk_A           72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK-KGELFDYLTEKVTLSEKETRKIMRALLEVICALH-KLNIVHRD  149 (298)
T ss_dssp             HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccC-CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCC
Confidence            7999999995 5543 22122212 34589999995 3433333332 46888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.+...
T Consensus       150 l~p~Nil~~~~~~~kl~dfg~~~~~  174 (298)
T 1phk_A          150 LKPENILLDDDMNIKLTDFGFSCQL  174 (298)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCcceEEEcCCCcEEEecccchhhc
Confidence            999999995 589999999998754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.9e-18  Score=160.49  Aligned_cols=145  Identities=17%  Similarity=0.129  Sum_probs=105.3

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |.+. ..||+|+||.||+|.....      ..+..||||+++.....                         .......+
T Consensus        11 ~~i~~~~lg~G~~g~Vy~~~~~~~------~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   59 (287)
T 1u59_A           11 LLIADIELGCGNFGSVRQGVYRMR------KKQIDVAIKVLKQGTEK-------------------------ADTEEMMR   59 (287)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---------CCEEEEEEEECSSCCH-------------------------HHHHHHHH
T ss_pred             hhhhhccccccCceeEEEeEeccC------CCcceEEEEecCCccch-------------------------hHHHHHHH
Confidence            4454 5999999999999986221      11788999999763110                         01122457


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.+|.+.+| ++-..+.....++||||++ .|.....+.  ...++...+..++.||+.+|.+|| ..|++|+|||
T Consensus        60 E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlk  137 (287)
T 1u59_A           60 EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAG-GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLA  137 (287)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEESSSEEEEEECCT-TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCS
T ss_pred             HHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCC-CCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH-HCCEeeCCCc
Confidence            8999999976653 2222223355689999995 333333332  235888999999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |.|||+ .++.++|+|||.|...
T Consensus       138 p~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A          138 ARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             GGGEEEEETTEEEECCCTTCEEC
T ss_pred             hheEEEcCCCCEEECcccceeee
Confidence            999999 4689999999999754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.78  E-value=1.4e-18  Score=160.41  Aligned_cols=147  Identities=20%  Similarity=0.234  Sum_probs=109.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++..........                    .......+|
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~~~~--------------------~~~~~~~~E   58 (283)
T 3bhy_A            7 YEMGEELGSGQFAIVRKCRQKGT--------GKEYAAKFIKKRRLSSSRRG--------------------VSREEIERE   58 (283)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEBCSSTTCSSS--------------------BCHHHHHHH
T ss_pred             hhhHHhhcccCceEEEEEEEcCC--------CCeeehHHhhhccccccccc--------------------hHHHHHHHH
Confidence            89999999999999999999666        99999999986432111000                    011224578


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  +..+..    ...++||||+. .|.....+. ...++..++..++.||+.+|.+|| .+|+||+||
T Consensus        59 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl  134 (283)
T 3bhy_A           59 VNILREIRHPNI--ITLHDIFENKTDVVLILELVS-GGELFDFLAEKESLTEDEATQFLKQILDGVHYLH-SKRIAHFDL  134 (283)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred             HHHHHhCCCCCe--eehhheecCCCeEEEEEeecC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCC
Confidence            999999977653  223221    34689999994 233333332 246888999999999999999999 599999999


Q ss_pred             CCCceEEeC-C----eEEEEEccccccCC
Q psy10135        192 SEYNMLVHK-A----TLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~~-g----~l~IIDFG~Av~~~  215 (351)
                      ||.|||+.. +    .++|+|||.+....
T Consensus       135 ~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A          135 KPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             SGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             ChHHEEEecCCCCCCceEEEecccceecc
Confidence            999999953 4    79999999997654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.78  E-value=4.1e-19  Score=179.87  Aligned_cols=145  Identities=17%  Similarity=0.171  Sum_probs=109.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....  .. .                    ......+|
T Consensus        18 Y~l~~~LG~G~fg~V~~a~~~~~--------g~~vAvK~i~~~~~~--~~-~--------------------~~~~~~~E   66 (476)
T 2y94_A           18 YILGDTLGVGTFGKVKVGKHELT--------GHKVAVKILNRQKIR--SL-D--------------------VVGKIRRE   66 (476)
T ss_dssp             EEEEEEEECCSSSCEEEEEETTT--------CCEEEEEEEEHHHHH--HT-T--------------------THHHHHHH
T ss_pred             EEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEEhhhcc--CH-H--------------------HHHHHHHH
Confidence            99999999999999999998667        999999999753110  00 0                    01123578


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|+.+.+.+| .+-..+.. ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| ..|||||||||
T Consensus        67 i~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDLkp  144 (476)
T 2y94_A           67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS-GGELFDYICKNGRLDEKESRRLFQQILSGVDYCH-RHMVVHRDLKP  144 (476)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS-SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCSG
T ss_pred             HHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCCcccccH
Confidence            899988876653 22222222 44689999995 3444333433 46899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .|||++ ++.++|+|||.|...
T Consensus       145 ~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A          145 ENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             GGEEECTTCCEEECCCSSCEEC
T ss_pred             HHEEEecCCCeEEEeccchhhc
Confidence            999995 589999999998754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.78  E-value=5.8e-19  Score=182.98  Aligned_cols=145  Identities=17%  Similarity=0.133  Sum_probs=108.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++........                       ......+|
T Consensus       186 f~~~~~LG~G~fG~Vy~a~~~~t--------g~~vAvK~l~k~~~~~~~-----------------------~~~~~~~E  234 (576)
T 2acx_A          186 FRQYRVLGKGGFGEVCACQVRAT--------GKMYACKKLEKKRIKKRK-----------------------GEAMALNE  234 (576)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEHHHHHHTT-----------------------CHHHHHHH
T ss_pred             eEEEEEEeeCCCEEEEEEEECCC--------CCEEEEEEEEhHhhhhhH-----------------------HHHHHHHH
Confidence            89999999999999999998667        999999999753211000                       01123568


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      ..+|.++.+.+|. .-..+.. ...+|||||+. +|.....+..   ..++...+..++.||+.+|.+|| ..|||||||
T Consensus       235 ~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~-gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH-~~gIvHrDL  312 (576)
T 2acx_A          235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMN-GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-RERIVYRDL  312 (576)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCC-CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeccCC
Confidence            8999998766532 1111212 44689999995 3444333332   24889999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ +|.++|+|||.|...
T Consensus       313 KPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          313 KPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEEC
T ss_pred             chheEEEeCCCCeEEEecccceec
Confidence            99999995 689999999999754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.7e-18  Score=168.64  Aligned_cols=148  Identities=14%  Similarity=0.087  Sum_probs=105.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+... .......+..||||+++.....                         .......+|
T Consensus        71 y~i~~~LG~G~~g~Vy~a~~~~~-~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E  124 (382)
T 3tt0_A           71 LVLGKPLGEGAFGQVVLAEAIGL-DKDKPNRVTKVAVKMLKSDATE-------------------------KDLSDLISE  124 (382)
T ss_dssp             EEEEEEEEECSSEEEEEEEEETS-STTCTTCEEEEEEEEECTTCCH-------------------------HHHHHHHHH
T ss_pred             eEeeeEEecCCCeEEEEEEEccc-cccccccceEEEEEeeccccCH-------------------------HHHHHHHHH
Confidence            88999999999999999986321 0000112467999998753110                         011223578


Q ss_pred             HHHHHHh-hhCCCCccccccc----cceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHH
Q psy10135        117 MRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECV  174 (351)
Q Consensus       117 ~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll  174 (351)
                      +..|.++ .+.+|  +..+..    ...+|||||+. .|.....+..                 ..++..++..++.||+
T Consensus       125 ~~~l~~l~~hpnI--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~  201 (382)
T 3tt0_A          125 MEMMKMIGKHKNI--INLLGACTQDGPLYVIVEYAS-KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA  201 (382)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCchh--hhheeeeccCCceEEEEEecC-CCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHH
Confidence            9999999 55543  222321    45689999995 3333333322                 2488899999999999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .+|.+|| ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       202 ~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~  241 (382)
T 3tt0_A          202 RGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI  241 (382)
T ss_dssp             HHHHHHH-HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCS
T ss_pred             HHHHHHH-hCCEecCCCCcceEEEcCCCcEEEcccCccccc
Confidence            9999999 59999999999999995 689999999999754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.78  E-value=1.1e-18  Score=164.00  Aligned_cols=139  Identities=11%  Similarity=0.059  Sum_probs=103.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....                     +.  .......+|
T Consensus        33 y~i~~~lg~G~~g~Vy~a~~~~~--------~~~vavK~~~~~~~~---------------------~~--~~~~~~~~e   81 (286)
T 3uqc_A           33 YRLLIFHGGVPPLQFWQALDTAL--------DRQVALTFVDPQGVL---------------------PD--DVLQETLSR   81 (286)
T ss_dssp             EEEEEEEEBSTTCEEEEEEETTT--------TEEEEEEESCTTCCS---------------------CH--HHHHHHHHH
T ss_pred             EEEEEEEcccCCeEEEEEEecCC--------CceEEEEEECccccc---------------------CH--HHHHHHHHH
Confidence            99999999999999999999666        899999999763210                     00  011123468


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.+|  +..+..    ...+|||||+.  |..+..+........++..++.||+.+|.+|| .+||||||||
T Consensus        82 ~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH-~~givH~Dik  156 (286)
T 3uqc_A           82 TLRLSRIDKPGV--ARVLDVVHTRAGGLVVAEWIR--GGSLQEVADTSPSPVGAIRAMQSLAAAADAAH-RAGVALSIDH  156 (286)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEEETTEEEEEEECCC--EEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCS
T ss_pred             HHHHhcCCCCCc--ceeeEEEEECCcEEEEEEecC--CCCHHHHHhcCCChHHHHHHHHHHHHHHHHHH-HCCCccCCCC
Confidence            888888876653  333322    45689999994  43433333334566678899999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQS  211 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~A  211 (351)
                      |.|||+. +|.++|+++|..
T Consensus       157 p~NIll~~~g~~kl~~~~~~  176 (286)
T 3uqc_A          157 PSRVRVSIDGDVVLAYPATM  176 (286)
T ss_dssp             GGGEEEETTSCEEECSCCCC
T ss_pred             cccEEEcCCCCEEEEecccc
Confidence            9999995 578888877655

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.78  E-value=6.4e-19  Score=175.95  Aligned_cols=140  Identities=15%  Similarity=0.138  Sum_probs=107.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.. ..        +..||||+++.....                           .....+|
T Consensus       190 ~~~~~~lG~G~fg~V~~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~E  233 (454)
T 1qcf_A          190 LKLEKKLGAGQFGEVWMATY-NK--------HTKVAVKTMKPGSMS---------------------------VEAFLAE  233 (454)
T ss_dssp             EEEEEEEECCSSEEEEEEEE-TT--------TEEEEEEEECTTSBC---------------------------HHHHHHH
T ss_pred             eEEEEEcccCCceEEEEEEE-CC--------ccEEEEEEecCCCcc---------------------------HHHHHHH
Confidence            78899999999999999998 55        788999998763210                           1123468


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|++|.+.+| .....+.....+|||||+. .|.+...+..   ..++..++..++.||+.+|.+|| ..||||||||
T Consensus       234 ~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlk  311 (454)
T 1qcf_A          234 ANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA-KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-QRNYIHRDLR  311 (454)
T ss_dssp             HHHHTTCCCTTBCCEEEEECSSSCEEEECCCT-TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCS
T ss_pred             HHHHhhCCCCCEeeEEEEEeCCccEEEEeecC-CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCC
Confidence            899999876653 2222222345689999995 4554444443   25778888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       312 p~Nill~~~~~~kl~DFG~a~~~  334 (454)
T 1qcf_A          312 AANILVSASLVCKIADFGLARVI  334 (454)
T ss_dssp             GGGEEECTTCCEEECSTTGGGGB
T ss_pred             HHHEEECCCCcEEEeeCCCceEc
Confidence            9999995 589999999999754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.78  E-value=1.5e-18  Score=168.78  Aligned_cols=142  Identities=19%  Similarity=0.190  Sum_probs=105.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                           .......|
T Consensus        56 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~---------------------------~~~~~~~e  100 (382)
T 2vx3_A           56 YEIDSLIGKGSFGQVVKAYDRVE--------QEWVAIKIIKNKKA---------------------------FLNQAQIE  100 (382)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------TEEEEEEEECSSHH---------------------------HHHHHHHH
T ss_pred             EEEEEEEeecCCEEEEEEEEcCC--------CcEEEEEEEeccHH---------------------------HHHHHHHH
Confidence            89999999999999999998666        89999999875210                           01123457


Q ss_pred             HHHHHHhhhCC-CC---cccccc----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHh-hC
Q psy10135        117 MRNLTRMYSEG-LN---VPKPIL----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYN-KC  184 (351)
Q Consensus       117 ~~nL~rL~~~g-i~---vP~pi~----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~-~~  184 (351)
                      .+.|..+.... +.   ++..+.    ....+|||||++  |.....+..   ..++...+..++.||+.+|.+||. ..
T Consensus       101 ~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~  178 (382)
T 2vx3_A          101 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS--YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL  178 (382)
T ss_dssp             HHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred             HHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC--CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence            77888775432 21   122111    144579999994  544444433   348888999999999999999993 47


Q ss_pred             CccccCCCCCceEEe---CCeEEEEEccccccCC
Q psy10135        185 HLVHADLSEYNMLVH---KATLFIIDVAQSVEHD  215 (351)
Q Consensus       185 glVH~DLkp~NILi~---~g~l~IIDFG~Av~~~  215 (351)
                      |||||||||.|||+.   ++.++|+|||.|...+
T Consensus       179 ~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~  212 (382)
T 2vx3_A          179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG  212 (382)
T ss_dssp             CEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             CEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence            999999999999994   4679999999997653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.78  E-value=1.1e-18  Score=161.40  Aligned_cols=148  Identities=16%  Similarity=0.054  Sum_probs=107.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.....     .+.+..||||+++.....                         .......+
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   62 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNH-----KGEKINVAVKTCKKDCTL-------------------------DNKEKFMS   62 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECT-----TCCEEEEEEEECCTTSCH-------------------------HHHHHHHH
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCC-----CCCcceEEEEecccccCc-------------------------hHHHHHHH
Confidence            389999999999999999986322     011456999998753110                         01112356


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.+|.+.+| ++...+.....++||||+. .|.....+..  ..++...+..++.||+.+|.+|| .+|++|+|||
T Consensus        63 E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlk  140 (281)
T 3cc6_A           63 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP-YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE-SINCVHRDIA  140 (281)
T ss_dssp             HHHHHHHHCCTTBCCEEEEECSSSCEEEEECCT-TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCS
T ss_pred             HHHHHHhCCCCCcceEEEEEcCCCCEEEEecCC-CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCc
Confidence            8999999977653 2222223355689999995 3333333332  34888889999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccCC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      |.|||+ .++.++|+|||.|....
T Consensus       141 p~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A          141 VRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             GGGEEEEETTEEEECCCCGGGCC-
T ss_pred             cceEEECCCCcEEeCccCCCcccc
Confidence            999999 46899999999997553

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.78  E-value=6e-19  Score=163.22  Aligned_cols=141  Identities=16%  Similarity=0.120  Sum_probs=108.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|++|.||+|.+..+        +..||||+++.....                           .....+
T Consensus        14 ~~~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~---------------------------~~~~~~   58 (288)
T 3kfa_A           14 DITMKHKLGGGQYGEVYEGVWKKY--------SLTVAVKTLKEDTME---------------------------VEEFLK   58 (288)
T ss_dssp             GEEEEEESGGGTTCSEEEEEEGGG--------TEEEEEEEECSCSTH---------------------------HHHHHH
T ss_pred             ceeEEeecCCCCceeEEEeEecCC--------CEEEEEEecCcCHHH---------------------------HHHHHH
Confidence            389999999999999999998666        889999998753210                           112346


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|++|.+.+|  +..+..    ...++||||+. .|.....+..   ..++...+..++.||+.+|.+|| ..|+||
T Consensus        59 E~~~l~~l~h~~i--~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H  134 (288)
T 3kfa_A           59 EAAVMKEIKHPNL--VQLLGVCTREPPFYIITEFMT-YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIH  134 (288)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECSSSSEEEEEECCT-TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH-HHTCCC
T ss_pred             HHHHHHhCCCCCE--eeEEEEEccCCCEEEEEEcCC-CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH-HCCccC
Confidence            8999999987653  223322    44589999995 3443333332   34788889999999999999999 589999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +||||.|||+. ++.++|+|||.|....
T Consensus       135 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~  162 (288)
T 3kfa_A          135 RDLAARNCLVGENHLVKVADFGLSRLMT  162 (288)
T ss_dssp             SCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred             CCCCcceEEEcCCCCEEEccCccceecc
Confidence            99999999994 6889999999997553

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.78  E-value=7.7e-19  Score=162.73  Aligned_cols=143  Identities=21%  Similarity=0.232  Sum_probs=108.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        ++.||||++.........                       ......+|
T Consensus        16 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~-----------------------~~~~~~~e   64 (284)
T 2vgo_A           16 FDIGRPLGKGKFGNVYLAREKQN--------KFIMALKVLFKSQLEKEG-----------------------VEHQLRRE   64 (284)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEEHHHHHHTT-----------------------CHHHHHHH
T ss_pred             ceeeheecCCCCeEEEEEEEcCC--------CcEEEEEEEcccccchHH-----------------------HHHHHHHH
Confidence            99999999999999999998666        889999998753211000                       01123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.++.+.+|  +..+..    ...++||||+. .|.....+.. ..++...+..++.||+.+|.+|| .+|++|+||
T Consensus        65 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl  140 (284)
T 2vgo_A           65 IEIQSHLRHPNI--LRMYNYFHDRKRIYLMLEFAP-RGELYKELQKHGRFDEQRSATFMEELADALHYCH-ERKVIHRDI  140 (284)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEECSSEEEEEECCCT-TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCC
T ss_pred             HHHHhcCCCCCE--eeEEEEEEcCCEEEEEEEeCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCC
Confidence            899999876653  233322    44589999995 3333333332 45888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.+...
T Consensus       141 ~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A          141 KPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CHHHEEEcCCCCEEEecccccccC
Confidence            99999995 689999999998654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.78  E-value=6.9e-19  Score=167.46  Aligned_cols=144  Identities=15%  Similarity=0.078  Sum_probs=102.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcE----EEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKE----FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~----vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.    ||+|.++....     .                    ....
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~--------~~~~~~~vaiK~~~~~~~-----~--------------------~~~~   62 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPE--------GEKVKIPVAIKELREATS-----P--------------------KANK   62 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC------------CCEEEEEEEC--------------------------------CHH
T ss_pred             HcccceEEeeCCCeEEEEEEEcCC--------CceEEEEEEEeecccccC-----H--------------------HHHH
Confidence            389999999999999999997555        554    57776653210     0                    0011


Q ss_pred             HHHHHHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        112 WAEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ...+|+..|.++.+.+| .+-..+.....++||+|+. .|.....+..  ..++...+..++.||+.+|.+|| ..||||
T Consensus        63 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH  140 (327)
T 3poz_A           63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMP-FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-DRRLVH  140 (327)
T ss_dssp             HHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEEECCT-TCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh-hCCeeC
Confidence            23568999999977653 2222222355679999996 4555444443  45888899999999999999999 589999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.++|+|||.|...
T Consensus       141 ~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A          141 RDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             CCCChheEEECCCCCEEEccCcceeEc
Confidence            99999999994 689999999998643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.78  E-value=1.1e-18  Score=160.06  Aligned_cols=143  Identities=17%  Similarity=0.087  Sum_probs=101.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+ .         |..||||+++........                      .......+
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~-~---------~~~vavK~~~~~~~~~~~----------------------~~~~~~~~   55 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFW-I---------GDEVAVKAARHDPDEDIS----------------------QTIENVRQ   55 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEE-T---------TEEEEEEEC--------------------------------CHHHHHH
T ss_pred             heeeeeeeccCCCeEEEEEEE-c---------CCeEEEEEEecCCcccHH----------------------HHHHHHHH
Confidence            389999999999999999987 3         789999998753211000                      00112356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCC---ccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH---LVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~g---lVH  188 (351)
                      |+..+..+.+.+|  +..+..    ...++||||+. .|.....+....++...+..++.|++.+|.+|| ..|   +||
T Consensus        56 e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH-~~~~~~i~H  131 (271)
T 3dtc_A           56 EAKLFAMLKHPNI--IALRGVCLKEPNLCLVMEFAR-GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH-DEAIVPIIH  131 (271)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECCC--CEEEEECCT-TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH-HSSSSCCCC
T ss_pred             HHHHHHhcCCCCE--eeEEEEEecCCceEEEEEcCC-CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceee
Confidence            8889998877653  223322    44689999994 333333345567899999999999999999999 488   899


Q ss_pred             cCCCCCceEEe---------CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH---------KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~---------~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+.         ++.++|+|||.|...
T Consensus       132 ~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~  166 (271)
T 3dtc_A          132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREW  166 (271)
T ss_dssp             SCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred             cCCchHHEEEecccccccccCcceEEccCCccccc
Confidence            99999999995         567999999999654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.2e-18  Score=165.71  Aligned_cols=147  Identities=18%  Similarity=0.118  Sum_probs=104.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+...   ...+.+..||||+++.....     .                    ......+
T Consensus        46 ~y~~~~~lG~G~~g~V~~~~~~~~---~~~~~~~~vavK~~~~~~~~-----~--------------------~~~~~~~   97 (344)
T 1rjb_A           46 NLEFGKVLGSGAFGKVMNATAYGI---SKTGVSIQVAVKMLKEKADS-----S--------------------EREALMS   97 (344)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESC---SSSSCEEEEEEEEECC-------------------------------CHHHHH
T ss_pred             HceeeeeecCCCCceeEEeeeecc---ccCCcceEEEEEecccccCH-----H--------------------HHHHHHH
Confidence            489999999999999999986211   00112678999999752100     0                    0112356


Q ss_pred             HHHHHHHh-hhCCCCccccccc----cceEEEEcccCcccccccccccC------------------------CCCHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDT------------------------PLTESGA  166 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~------------------------~l~~~~~  166 (351)
                      |+..|.+| .+.+|  +..+..    ...+|||||+. .|.+...+...                        .++...+
T Consensus        98 E~~~l~~l~~hp~i--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  174 (344)
T 1rjb_A           98 ELKMMTQLGSHENI--VNLLGACTLSGPIYLIFEYCC-YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL  174 (344)
T ss_dssp             HHHHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHTTTTCC---------------------CCHHHH
T ss_pred             HHHHHHhhcCCCCe--eeEEEEEeeCCccEEEEecCC-CCcHHHHHhhccccccccccchhhhcccccccccccCCHHHH
Confidence            89999999 56553  233322    45689999995 34433333221                        2677888


Q ss_pred             HHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        167 CKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       167 ~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..++.||+.+|.+|| ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       175 ~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~  222 (344)
T 1rjb_A          175 LCFAYQVAKGMEFLE-FKSCVHRDLAARNVLVTHGKVVKICDFGLARDI  222 (344)
T ss_dssp             HHHHHHHHHHHHHHH-HTTEEETTCSGGGEEEETTTEEEECCCGGGSCG
T ss_pred             HHHHHHHHHHHHHHH-hCCcccCCCChhhEEEcCCCcEEeCCCccCccc
Confidence            999999999999999 59999999999999995 689999999999644

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.78  E-value=1.1e-18  Score=176.91  Aligned_cols=140  Identities=16%  Similarity=0.144  Sum_probs=106.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.++||.|+||.||+|.+..+        |+.||||+++....     .      .+                 ...
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~~~--------~~~vAvK~~~~~~~-----~------~~-----------------~~~   51 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNIQT--------NEEVAIKLENVKTK-----H------PQ-----------------LLY   51 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEETTT--------CCEEEEEEEETTCS-----S------CC-----------------HHH
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCC--------CcEEEEEEeccccc-----c------HH-----------------HHH
Confidence            499999999999999999998666        99999998765210     0      00                 235


Q ss_pred             HHHHHHHhhhC-CCCcccccc--ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSE-GLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~-gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |...+..|.+. +++....+.  ....+|||||+|  |.+...+.  ...++...+..++.||+.+|.+|| .+||||||
T Consensus        52 E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g--~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH-~~gIvHrD  128 (483)
T 3sv0_A           52 ESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG--PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRD  128 (483)
T ss_dssp             HHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCC
T ss_pred             HHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCC--CCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCEeecc
Confidence            78888888653 333222222  134589999994  44433333  346899999999999999999999 59999999


Q ss_pred             CCCCceEE----eCCeEEEEEccccccC
Q psy10135        191 LSEYNMLV----HKATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi----~~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+    .++.++|+|||+|...
T Consensus       129 IKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A          129 IKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             CCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             cCcceEEEecCCCCCeEEEEeCCcceec
Confidence            99999999    3588999999999654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=8.4e-19  Score=169.34  Aligned_cols=150  Identities=21%  Similarity=0.205  Sum_probs=105.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.....     ...|+.||||+++........  ...   .++                 .+
T Consensus        55 ~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~~~~vavK~~~~~~~~~~~--~~~---~~~-----------------~~  107 (355)
T 1vzo_A           55 NFELLKVLGTGAYGKVFLVRKISG-----HDTGKLYAMKVLKKATIVQKA--KTT---EHT-----------------RT  107 (355)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSS-----TTTTCEEEEEEESEEEEEEEE--SSG---GGC-----------------CC
T ss_pred             ceEEEEEeccCCCEEEEEEEEccc-----CCCCeEEEEEEEeHHHhhhhh--hHH---HHH-----------------HH
Confidence            389999999999999999987320     012899999998753211000  000   012                 23


Q ss_pred             HHHHHHHhh-hCCCCc-cccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMY-SEGLNV-PKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~-~~gi~v-P~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.++. +.+|.. -..+.. ...+|||||+. .|.....+.. ..++..++..++.||+.+|.+|| ..|||||||
T Consensus       108 E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dl  185 (355)
T 1vzo_A          108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYIN-GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH-KLGIIYRDI  185 (355)
T ss_dssp             HHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCC-SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCC
T ss_pred             HHHHHHHccCCCceeEEEEEEeeCceEEEEeecCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCC
Confidence            778888884 444321 111111 34679999995 3444333432 46888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+. ++.++|+|||.|...
T Consensus       186 kp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          186 KLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             CGGGEEECTTSCEEESCSSEEEEC
T ss_pred             CHHHEEECCCCcEEEeeCCCCeec
Confidence            99999995 689999999998653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.78  E-value=8.6e-19  Score=161.19  Aligned_cols=144  Identities=17%  Similarity=0.173  Sum_probs=108.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|++|.||+|.+..+        |+.||||+++.....  . ..                    ......+|
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~--~-~~--------------------~~~~~~~e   61 (276)
T 2h6d_A           13 YVLGDTLGVGTFGKVKIGEHQLT--------GHKVAVKILNRQKIR--S-LD--------------------VVGKIKRE   61 (276)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHH--H-TT--------------------CHHHHHHH
T ss_pred             EEEEeeecCCCCeEEEEEEECCC--------CceEEEEEecccccc--c-hh--------------------HHHHHHHH
Confidence            89999999999999999998656        999999998752110  0 00                    01123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++.+.+|  +..+..    ...++||||+. +|.....+. ...++..++..++.||+.+|.+|| ..|++|+||
T Consensus        62 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl  137 (276)
T 2h6d_A           62 IQNLKLFRHPHI--IKLYQVISTPTDFFMVMEYVS-GGELFDYICKHGRVEEMEARRLFQQILSAVDYCH-RHMVVHRDL  137 (276)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HHCSSCCCC
T ss_pred             HHHHhcCCCCCE--eEEEEEEecCCeEEEEEeccC-CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCC
Confidence            888998876653  223322    44689999994 233333332 246888899999999999999999 489999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||++ ++.++|+|||.+....
T Consensus       138 ~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A          138 KPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             CGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             ChhhEEECCCCCEEEeecccccccC
Confidence            99999995 6899999999997654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.78  E-value=1.7e-18  Score=162.87  Aligned_cols=143  Identities=17%  Similarity=0.200  Sum_probs=107.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||++......                          ......+
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~--------------------------~~~~~~~   74 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGS--------GREYALKRLLSNEEE--------------------------KNRAIIQ   74 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTT--------CCEEEEEEEEESSHH--------------------------HHHHHHH
T ss_pred             eEEEEEEEccCCceEEEEEEECCC--------CcEEEEEEecCCchH--------------------------HHHHHHH
Confidence            499999999999999999998666        999999988542110                          0112356


Q ss_pred             HHHHHHHhh-hCCCC-ccccc---------cccceEEEEcccCcccccccccc----cCCCCHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMY-SEGLN-VPKPI---------LLKSHVLLMTFIGEDGWPAAKLK----DTPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       116 E~~nL~rL~-~~gi~-vP~pi---------~~~~~vLVMEfig~~G~~~~~L~----~~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      |+..|.++. +.+|. +...+         .....++||||++  |.+...+.    ...++..++..++.||+.+|.+|
T Consensus        75 e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~--g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L  152 (337)
T 3ll6_A           75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK--GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM  152 (337)
T ss_dssp             HHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS--EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC--CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            888999985 55432 11111         0122579999994  65444332    24588899999999999999999


Q ss_pred             HhhCC--ccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        181 YNKCH--LVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       181 H~~~g--lVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      | ..|  |||+||||.|||+. ++.++|+|||.|....
T Consensus       153 H-~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  189 (337)
T 3ll6_A          153 H-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS  189 (337)
T ss_dssp             H-TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCS
T ss_pred             H-hCCCCEEEccCCcccEEECCCCCEEEecCccceecc
Confidence            9 588  99999999999995 5899999999997654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.78  E-value=1.8e-18  Score=159.46  Aligned_cols=140  Identities=16%  Similarity=0.162  Sum_probs=106.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        +..+|+|++......                     +     .....+|
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~--------~~~~a~k~~~~~~~~---------------------~-----~~~~~~E   56 (277)
T 3f3z_A           11 YTLENTIGRGSWGEVKIAVQKGT--------RIRRAAKKIPKYFVE---------------------D-----VDRFKQE   56 (277)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEGGGCS---------------------C-----HHHHHHH
T ss_pred             EEeeeEEeecCCEEEEEEEeCCC--------CcEEEEEeehhhccc---------------------h-----HHHHHHH
Confidence            89999999999999999998666        889999998752110                     0     0113468


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  +..+..    ...++||||+. +|.....+. ...++..++..++.|++.+|.+|| ..|+||+||
T Consensus        57 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dl  132 (277)
T 3f3z_A           57 IEIMKSLDHPNI--IRLYETFEDNTDIYLVMELCT-GGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-KLNVAHRDL  132 (277)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHhCCCCCE--eeEEEEEecCCeEEEEEeccC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCC
Confidence            899999876653  233322    34589999995 333333332 345888999999999999999999 599999999


Q ss_pred             CCCceEE---e-CCeEEEEEccccccC
Q psy10135        192 SEYNMLV---H-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi---~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||+   . ++.++|+|||.|...
T Consensus       133 kp~Nil~~~~~~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A          133 KPENFLFLTDSPDSPLKLIDFGLAARF  159 (277)
T ss_dssp             SGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             CHHHEEEecCCCCCcEEEEecccceec
Confidence            9999999   3 478999999998654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.77  E-value=1.6e-18  Score=162.72  Aligned_cols=143  Identities=15%  Similarity=0.050  Sum_probs=106.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++....                          .......+
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~--------------------------~~~~~~~~   75 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHD--------GHFYALKRILCHEQ--------------------------QDREEAQR   75 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTT--------CCEEEEEEEEESSH--------------------------HHHHHHHH
T ss_pred             EEEEEEEecCCCCeEEEEEEecCC--------CcEEEEEEEecCCH--------------------------HHHHHHHH
Confidence            499999999999999999998666        99999998864211                          01112356


Q ss_pred             HHHHHHHhhhCCCC-cccccc-----ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-----LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-----~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      |+..+.+|.+.+|. +-..+.     ....++||||+. .|.....+.     ...++..++..++.||+.+|.+|| .+
T Consensus        76 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~  153 (317)
T 2buj_A           76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK-RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH-AK  153 (317)
T ss_dssp             HHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT-TCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC-CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hC
Confidence            88899988776532 211111     124579999995 334333332     245888999999999999999999 58


Q ss_pred             CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||+||||.|||+. ++.++|+|||.+...
T Consensus       154 ~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            999999999999994 689999999988654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.77  E-value=1.2e-18  Score=164.59  Aligned_cols=140  Identities=16%  Similarity=0.107  Sum_probs=106.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.. .+        |+.||||++......                          ......+
T Consensus        40 ~y~~~~~lg~G~~g~Vy~~~~-~~--------~~~vavK~~~~~~~~--------------------------~~~~~~~   84 (321)
T 2qkw_B           40 NFDHKFLIGHGVFGKVYKGVL-RD--------GAKVALKRRTPESSQ--------------------------GIEEFET   84 (321)
T ss_dssp             CCSCCCCSCBCSSSEEEEEEC-TT--------CCEEEEEECCSCCSS--------------------------HHHHHHH
T ss_pred             ccCccceeecCCCeeEEEEEE-CC--------CCEEEEEEecccChH--------------------------HHHHHHH
Confidence            388999999999999999997 56        899999987653110                          0112356


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |+..|.++.+.+|  +..+..    ...++||||+. +|.....+..     ..++..++..++.||+.+|.+|| .+|+
T Consensus        85 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i  160 (321)
T 2qkw_B           85 EIETLSFCRHPHL--VSLIGFCDERNEMILIYKYME-NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH-TRAI  160 (321)
T ss_dssp             HHHGGGSCCCTTB--CCEEEECCCTTCCEEEEECCT-TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHHHHhCCCCCE--eeEEEEEcCCCeEEEEEEcCC-CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc-CCCe
Confidence            8888888876653  233322    45689999995 3444333432     24788889999999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||.|||++ ++.++|+|||.|...
T Consensus       161 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          161 IHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             ECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             ecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            9999999999995 589999999998643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.77  E-value=1.5e-18  Score=158.62  Aligned_cols=139  Identities=16%  Similarity=0.100  Sum_probs=107.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|++|.||+|.+ .+        +..||||+++.....                           .....+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~-~~--------~~~vaiK~~~~~~~~---------------------------~~~~~~   52 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYW-LN--------KDKVAIKTIREGAMS---------------------------EEDFIE   52 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEE-TT--------TEEEEEEEECTTTBC---------------------------HHHHHH
T ss_pred             heeeeeEecCCCceeEEEEEe-cC--------CCeEEEEEccccCCC---------------------------HHHHHH
Confidence            488999999999999999998 55        789999998763210                           012356


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..+.+|.+.+|  ++.+.    ....++||||+. .|.....+..  ..++...+..++.|++.+|.+|| ..|++|+
T Consensus        53 e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~  128 (267)
T 3t9t_A           53 EAEVMMKLSHPKL--VQLYGVCLEQAPICLVTEFME-HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHR  128 (267)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEECSSSSCEEEECCCT-TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHHhCCCCCE--eeEEEEEccCCCeEEEEeCCC-CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH-hCCcccC
Confidence            8899999876653  23332    245689999994 3333333332  34788889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||++ ++.++|+|||.+...
T Consensus       129 dl~p~Nili~~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A          129 DLAARNCLVGENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             SCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             CCchheEEECCCCCEEEccccccccc
Confidence            9999999994 688999999999754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.77  E-value=1.3e-18  Score=161.11  Aligned_cols=149  Identities=13%  Similarity=0.104  Sum_probs=105.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+ .......+..||+|+++......                          .....+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~-~~~~~~~~~~va~K~~~~~~~~~--------------------------~~~~~~   61 (289)
T 4fvq_A            9 DLIFNESLGQGTFTKIFKGVRREV-GDYGQLHETEVLLKVLDKAHRNY--------------------------SESFFE   61 (289)
T ss_dssp             GEEEEEEEEEETTEEEEEEEEEEE-CGGGCEEEEEEEEEEECGGGGGG--------------------------HHHHHH
T ss_pred             HeeeeeeeccCCCceEEEEEEecc-cccccccchhhhhhhcccccHHH--------------------------HHHHHH
Confidence            389999999999999999987443 00000002579999986521100                          112346


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.++.+.+|  +..+..    ...+|||||+. .|.....+...  .++...+..++.||+.+|.+|| ..|||||
T Consensus        62 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~  137 (289)
T 4fvq_A           62 AASMMSKLSHKHL--VLNYGVCVCGDENILVQEFVK-FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE-ENTLIHG  137 (289)
T ss_dssp             HHHHHHTSCCTTB--CCEEEEECCTTCCEEEEECCT-TCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH-HTTCCCC
T ss_pred             HHHHHHhCCCCCE--eEEEEEEEeCCCCEEEEECCC-CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh-hCCeECC
Confidence            8889999876653  223322    45689999995 34443334332  3888889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCe--------EEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KAT--------LFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g~--------l~IIDFG~Av~~~  215 (351)
                      ||||.|||+. ++.        ++|+|||.|....
T Consensus       138 Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~  172 (289)
T 4fvq_A          138 NVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL  172 (289)
T ss_dssp             CCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTS
T ss_pred             CcCcceEEEecCCcccccccceeeeccCccccccc
Confidence            9999999995 444        9999999996553

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.77  E-value=1.2e-18  Score=162.29  Aligned_cols=141  Identities=18%  Similarity=0.173  Sum_probs=107.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |..+|||++......                     ..    .....+|
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~---------------------~~----~~~~~~E   70 (285)
T 3is5_A           24 FIFKRKLGSGAFGDVHLVEERSS--------GLERVIKTINKDRSQ---------------------VP----MEQIEAE   70 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEGGGCC---------------------SC----HHHHHHH
T ss_pred             eeecceeccCCCeEEEEEEEccC--------CceEEEEEeeccccc---------------------hh----HHHHHHH
Confidence            89999999999999999998666        899999998752100                     00    1123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      +..|.+|.+.+|  ++.+..    ...++||||+. .|.....+.     ...++...+..++.||+.+|.+|| ..|||
T Consensus        71 ~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~iv  146 (285)
T 3is5_A           71 IEVLKSLDHPNI--IKIFEVFEDYHNMYIVMETCE-GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-SQHVV  146 (285)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEECSSEEEEEECCCS-CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHhCCCchH--HhHHHheecCCeEEEEEEeCC-CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH-hCCEE
Confidence            999999976653  233322    34589999995 344433332     245888899999999999999999 59999


Q ss_pred             ccCCCCCceEEe----CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH----KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~----~g~l~IIDFG~Av~~  214 (351)
                      ||||||.|||+.    ++.++|+|||.|...
T Consensus       147 H~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          147 HKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             ECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            999999999994    367999999999654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.77  E-value=3.3e-19  Score=174.69  Aligned_cols=144  Identities=19%  Similarity=0.177  Sum_probs=98.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        ++.||||+++...........                     .  ...|
T Consensus        40 y~~~~~lG~G~fg~V~~~~~~~~--------~~~~AiK~~~~~~~~~~~~~~---------------------~--~~~e   88 (373)
T 2r5t_A           40 FHFLKVIGKGSFGKVLLARHKAE--------EVFYAVKVLQKKAILKKKEEK---------------------H--IMSE   88 (373)
T ss_dssp             EEEEEEEECCTTCEEEEEEETTT--------CCEEEEEEEEGGGBC----------------------------------
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCC--------CCEEEEEEEEHHHhhhhHHHH---------------------H--HHHH
Confidence            89999999999999999999666        899999999763211110000                     0  0112


Q ss_pred             HHH-HHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRN-LTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~n-L~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ... +..+.+.+| .+-..+. ....+|||||+. +|.....+.. ..++...++.++.||+.+|.+|| .+||||||||
T Consensus        89 ~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlk  166 (373)
T 2r5t_A           89 RNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN-GGELFYHLQRERCFLEPRARFYAAEIASALGYLH-SLNIVYRDLK  166 (373)
T ss_dssp             --CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCC
T ss_pred             HHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCceecCCC
Confidence            222 122333221 1111111 144589999995 3444444433 45888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |.|||++ +|.++|+|||.|..
T Consensus       167 p~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          167 PENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             GGGEEECTTSCEEECCCCBCGG
T ss_pred             HHHEEECCCCCEEEeeCccccc
Confidence            9999995 68999999999865

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.77  E-value=9.3e-19  Score=163.24  Aligned_cols=146  Identities=16%  Similarity=0.102  Sum_probs=107.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++........                      .......+
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~--------~~~~avK~~~~~~~~~~~----------------------~~~~~~~~   55 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSET--------LCRRAVKILKKKKLRRIP----------------------NGEANVKK   55 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTT--------CCEEEEEEECHHHHHHST----------------------THHHHHHH
T ss_pred             ceeEeeEEecCCCeEEEEEEECCC--------CcEEEEEEeccccccccc----------------------hhHHHHHH
Confidence            389999999999999999998666        899999998753210000                      01122457


Q ss_pred             HHHHHHHhhhCCCC-cccccc---ccceEEEEcccCccccccccc---ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL---LKSHVLLMTFIGEDGWPAAKL---KDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~---~~~~vLVMEfig~~G~~~~~L---~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|.+|.+.+|. +...+.   ....+|||||++  |.....+   ....++...+..++.||+.+|.+|| ..|+||
T Consensus        56 E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH-~~~i~H  132 (305)
T 2wtk_C           56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCV--CGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH-SQGIVH  132 (305)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCS--EEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhcc--CCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH-HCCeee
Confidence            89999998766532 222211   134589999995  3222222   2346888899999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||||.|||+. ++.++|+|||.+...
T Consensus       133 ~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C          133 KDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCCcccEEEcCCCcEEeecccccccc
Confidence            99999999994 689999999999654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.77  E-value=1.4e-18  Score=161.76  Aligned_cols=144  Identities=17%  Similarity=0.105  Sum_probs=108.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||+|++......-                       ........+
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~a~K~~~~~~~~~-----------------------~~~~~~~~~   64 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADT--------KEVFAGKIVPKSLLLK-----------------------PHQREKMSM   64 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEGGGCCS-----------------------HHHHHHHHH
T ss_pred             ceEEEEEEeecCCEEEEEEEECCC--------CceEEEEEechhhccC-----------------------HHHHHHHHH
Confidence            499999999999999999999666        8999999987532100                       011223456


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..+..+.+.+|  +..+..    ...++||||++ .|.....+. ...++..++..++.||+.+|.+|| ..|++|+|
T Consensus        65 e~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~d  140 (294)
T 2rku_A           65 EISIHRSLAHQHV--VGFHGFFEDNDFVFVVLELCR-RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH-RNRVIHRD  140 (294)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCC
T ss_pred             HHHHHHhCCCCCE--eeeeeeeccCCEEEEEEecCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccC
Confidence            8889998876653  223322    34579999995 233322222 246888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||++ ++.++|+|||.+...
T Consensus       141 l~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A          141 LKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CChHhEEEcCCCCEEEEeccCceec
Confidence            999999995 579999999999754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.77  E-value=2.5e-18  Score=163.64  Aligned_cols=149  Identities=14%  Similarity=0.072  Sum_probs=104.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+... .......+..||||+++.....                         .......+
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   89 (334)
T 2pvf_A           36 KLTLGKPLGEGAFGQVVMAEAVGI-DKDKPKEAVTVAVKMLKDDATE-------------------------KDLSDLVS   89 (334)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTC-STTCC---CEEEEEECCTTCCH-------------------------HHHHHHHH
T ss_pred             HeEEeeEEeecCceeEEEeEeccc-cccccccceEEEEeeeccCCcH-------------------------HHHHHHHH
Confidence            489999999999999999987321 0001112778999998753110                         00112356


Q ss_pred             HHHHHHHh-hhCCCCcccccc----ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYREC  173 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~ql  173 (351)
                      |+..|.+| .+.+|  +..+.    ....+|||||+. .|.....+..                 ..++..++..++.||
T Consensus        90 E~~~l~~l~~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  166 (334)
T 2pvf_A           90 EMEMMKMIGKHKNI--INLLGACTQDGPLYVIVEYAS-KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL  166 (334)
T ss_dssp             HHHHHHHHCCCTTB--CCEEEEECSSSCCEEEEECCT-TCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCE--eeEEEEEccCCceEEEEECCC-CCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHH
Confidence            88999998 55543  22332    245689999995 3333222222                 237788899999999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| ..||||+||||.|||+. ++.++|+|||.|...
T Consensus       167 ~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  207 (334)
T 2pvf_A          167 ARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDI  207 (334)
T ss_dssp             HHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHH-hCCeeCCCCccceEEEcCCCCEEEccccccccc
Confidence            99999999 59999999999999995 689999999998654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.77  E-value=7.3e-19  Score=177.16  Aligned_cols=144  Identities=18%  Similarity=0.161  Sum_probs=104.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |..||||+++........                        .....+|
T Consensus        39 y~~~~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~~------------------------~~~~~~E   86 (494)
T 3lij_A           39 YQRVKKLGSGAYGEVLLCRDKVT--------HVERAIKIIRKTSVSTSS------------------------NSKLLEE   86 (494)
T ss_dssp             EEEEEEEECC---EEEEEEETTT--------CCEEEEEEEEC-----CT------------------------THHHHHH
T ss_pred             eEEeeEEecCCCEEEEEEEECCC--------CcEEEEEEEeccccCchH------------------------HHHHHHH
Confidence            99999999999999999999666        899999999763211000                        0123468


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|++|.+.+| ++-..+.. ...+|||||+. .|.....+. ...++..++..++.||+.+|.+|| .+|||||||||
T Consensus        87 ~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp  164 (494)
T 3lij_A           87 VAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK-GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH-KHNIVHRDLKP  164 (494)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSG
T ss_pred             HHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCh
Confidence            999999877653 22222222 34579999995 344433333 356888999999999999999999 59999999999


Q ss_pred             CceEEeC----CeEEEEEccccccC
Q psy10135        194 YNMLVHK----ATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~~----g~l~IIDFG~Av~~  214 (351)
                      .|||+..    +.++|+|||.|...
T Consensus       165 ~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          165 ENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             GGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             hhEEEeCCCCCCcEEEEECCCCeEC
Confidence            9999942    45999999998644

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.77  E-value=1.3e-18  Score=164.72  Aligned_cols=146  Identities=18%  Similarity=0.093  Sum_probs=108.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.....    ....|+.||||+++....                         ........+|
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~----~~~~~~~vavK~~~~~~~-------------------------~~~~~~~~~E   83 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPT----NDGTGEMVAVKALKADAG-------------------------PQHRSGWKQE   83 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSC----C--CCEEEEEEEECTTCC-------------------------HHHHHHHHHH
T ss_pred             HhhhheecCCCCeEEEEEEEccC----CCCCCcEEEEEEeccccC-------------------------hHHHHHHHHH
Confidence            69999999999999998854211    111288999999875310                         0111224579


Q ss_pred             HHHHHHhhhCCCCccccccc------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  +..+..      ...+|||||+. .|.....+....++..++..++.||+.+|.+|| ..||||+|
T Consensus        84 ~~~l~~l~h~~i--v~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH-~~~ivH~D  159 (318)
T 3lxp_A           84 IDILRTLYHEHI--IKYKGCCEDAGAASLQLVMEYVP-LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH-AQHYIHRD  159 (318)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEEETTTTEEEEEECCCT-TCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHhCCCcch--hhEEEEEecCCCceEEEEEeccc-CCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCC
Confidence            999999987653  222221      23479999995 345555566667899999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.|....
T Consensus       160 ikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          160 LAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             CSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             CchheEEEcCCCCEEECCcccccccc
Confidence            999999995 5789999999997653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.77  E-value=2.2e-18  Score=164.45  Aligned_cols=144  Identities=17%  Similarity=0.119  Sum_probs=108.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        ++.||+|++......                       .........+
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~a~K~~~~~~~~-----------------------~~~~~~~~~~   90 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDADT--------KEVFAGKIVPKSLLL-----------------------KPHQREKMSM   90 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEGGGCC-----------------------SHHHHHHHHH
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEechhhhc-----------------------CHHHHHHHHH
Confidence            499999999999999999999666        899999998753210                       0011223456


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+..+.+|.+.+|  +..+..    ...+|||||+. .|.....+. ...++..++..++.||+.+|.+|| .+||||+|
T Consensus        91 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~d  166 (335)
T 2owb_A           91 EISIHRSLAHQHV--VGFHGFFEDNDFVFVVLELCR-RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH-RNRVIHRD  166 (335)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEEECSSEEEEEECCCT-TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHhCCCCCC--CeEEEEEecCCeEEEEEecCC-CCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCEecC
Confidence            8899998876653  223322    34589999995 233322222 246888999999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.+...
T Consensus       167 lkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          167 LKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCchhEEEcCCCCEEEeeccCceec
Confidence            999999995 579999999999654

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.77  E-value=5.6e-19  Score=164.31  Aligned_cols=141  Identities=15%  Similarity=0.103  Sum_probs=104.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.||||+++.......                        ......+|
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~------------------------~~~~~~~e   52 (299)
T 2r3i_A            5 FQKVEKIGEGTYGVVYKARNKLT--------GEVVALKKIRLDTETEG------------------------VPSTAIRE   52 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEC--------------------------------CCHHHHHH
T ss_pred             hhhhhhhccCCCeeEEEEEEcCC--------CceEEEEEeecCccchh------------------------hHHHHHHH
Confidence            88999999999999999998666        99999999875321000                        00123468


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..|.++.+.+|  +..+..    ...+|||||++  |.....+..   ..++...+..++.||+.+|.+|| ..|+||+
T Consensus        53 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~  127 (299)
T 2r3i_A           53 ISLLKELNHPNI--VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-SHRVLHR  127 (299)
T ss_dssp             HHHHTTCCCTTB--CCEEEEEEETTEEEEEEECCS--EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCC
T ss_pred             HHHHHHcCCCCe--eeEEEEEecCCceEEEEEccc--CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH-HCCccCC
Confidence            888988876653  233322    44689999994  543333322   35788889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||++ ++.++|+|||.|...
T Consensus       128 dlkp~Nili~~~~~~kl~dfg~~~~~  153 (299)
T 2r3i_A          128 DLKPQNLLINTEGAIKLADFGLARAF  153 (299)
T ss_dssp             CCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred             CCCHHHeEEcCCCCEEECcchhhhhc
Confidence            9999999995 689999999998654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.77  E-value=7.1e-19  Score=167.11  Aligned_cols=145  Identities=19%  Similarity=0.225  Sum_probs=104.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        ++.||||+++........                   +.  ......+|
T Consensus        28 y~~~~~lG~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~-------------------~~--~~~~~~~E   78 (345)
T 3hko_A           28 YHLKGAIGQGSYGVVRVAIENQT--------RAIRAIKIMNKNKIRQIN-------------------PK--DVERIKTE   78 (345)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHC----------------------C--HHHHHHHH
T ss_pred             eeecceeeecCCeEEEEEEECCC--------CceEEEeehhhhhhcccC-------------------HH--HHHHHHHH
Confidence            89999999999999999998666        899999998753211000                   00  11224579


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-----------------------------------
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-----------------------------------  157 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-----------------------------------  157 (351)
                      +..|.+|.+.+|  ++.+..    ...+|||||+. +|.....+.                                   
T Consensus        79 ~~~l~~l~hpni--v~~~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (345)
T 3hko_A           79 VRLMKKLHHPNI--ARLYEVYEDEQYICLVMELCH-GGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIH  155 (345)
T ss_dssp             HHHHHHCCCTTB--CCEEEEEECSSEEEEEEECCC-SCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC-
T ss_pred             HHHHHhCCCCCc--ceeehhhccCCeEEEEEeCCC-CCcHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence            999999976653  223322    34589999995 333322221                                   


Q ss_pred             ------cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CC--eEEEEEccccccC
Q psy10135        158 ------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KA--TLFIIDVAQSVEH  214 (351)
Q Consensus       158 ------~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g--~l~IIDFG~Av~~  214 (351)
                            ...++...+..++.||+.+|.+|| ..|||||||||.|||+. ++  .++|+|||.|...
T Consensus       156 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~  220 (345)
T 3hko_A          156 GFRESLDFVQREKLISNIMRQIFSALHYLH-NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF  220 (345)
T ss_dssp             -CEEECCHHHHHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHH-HCCccccCCChhhEEEecCCCceEEEeeccccccc
Confidence                  001245567789999999999999 58999999999999995 34  7999999999754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=9.7e-19  Score=165.11  Aligned_cols=137  Identities=23%  Similarity=0.244  Sum_probs=99.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|..  .        |+.||||++.....                           .....+.|
T Consensus        39 y~~~~~lg~G~~g~V~~~~~--~--------~~~vavK~~~~~~~---------------------------~~~~~e~~   81 (337)
T 3mdy_A           39 IQMVKQIGKGRYGEVWMGKW--R--------GEKVAVKVFFTTEE---------------------------ASWFRETE   81 (337)
T ss_dssp             CEEEEEEEEETTEEEEEEEE--T--------TEEEEEEEEEGGGH---------------------------HHHHHHHH
T ss_pred             eEEEeEeecCCCeEEEEEEE--C--------CceEEEEEEecccc---------------------------chhhhHHH
Confidence            89999999999999999987  3        78999999864210                           01111222


Q ss_pred             HHHHHHhhhCCCCccccccc--------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhC----
Q psy10135        117 MRNLTRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC----  184 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~----  184 (351)
                      +..+..+.+.+|  ...+..        ...+|||||+. .|.....++...++...+..++.|++.+|.+||. .    
T Consensus        82 ~~~~~~~~h~~i--~~~~~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~  157 (337)
T 3mdy_A           82 IYQTVLMRHENI--LGFIAADIKGTGSWTQLYLITDYHE-NGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHT-EIFST  157 (337)
T ss_dssp             HHTSTTCCCTTB--CCEEEEEEESCGGGCEEEEEECCCT-TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHS-CBCST
T ss_pred             HHHHHhhcCCCe--eeEEEEEccCCCCCCceEEEEeccC-CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH-hhhhh
Confidence            222222233332  222211        34579999995 4455555666678999999999999999999994 6    


Q ss_pred             ----CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 ----HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 ----glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                          |||||||||.|||+. ++.++|+|||.|...
T Consensus       158 ~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~  192 (337)
T 3mdy_A          158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF  192 (337)
T ss_dssp             TCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence                999999999999995 689999999999654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.77  E-value=2e-18  Score=163.86  Aligned_cols=150  Identities=17%  Similarity=0.152  Sum_probs=108.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......   .......++                 .+|
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~---~~~~~~~~~-----------------~~E   96 (320)
T 3a99_A           45 YQVGPLLGSGGFGSVYSGIRVSD--------NLPVAIKHVEKDRISDW---GELPNGTRV-----------------PME   96 (320)
T ss_dssp             EEEEEECSSSSSCEEEEEEETTT--------TEEEEEEEEEGGGCCCE---EECTTCCEE-----------------EHH
T ss_pred             eEEEEEEeeCCCeEEEEEEECCC--------CcEEEEEEEecccchhh---hhhhhhhHH-----------------HHH
Confidence            99999999999999999998666        89999999976421110   000001122                 247


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.++......++..+..    ...++|||++...|.....+. ...++...+..++.||+.+|.+|| .+|||||||
T Consensus        97 ~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dl  175 (320)
T 3a99_A           97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRDI  175 (320)
T ss_dssp             HHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCcEeCCC
Confidence            88888886411123333332    446799999952243333333 246888899999999999999999 599999999


Q ss_pred             CCCceEEe--CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH--KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~--~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+.  ++.++|+|||.|....
T Consensus       176 kp~NIll~~~~~~~kL~Dfg~~~~~~  201 (320)
T 3a99_A          176 KDENILIDLNRGELKLIDFGSGALLK  201 (320)
T ss_dssp             SGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             CHHHEEEeCCCCCEEEeeCccccccc
Confidence            99999996  4799999999987553

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.77  E-value=1.1e-18  Score=166.37  Aligned_cols=144  Identities=16%  Similarity=0.104  Sum_probs=103.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEE----EEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEF----AIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~v----AIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.++||+|+||.||+|.+..+        |+.+    |+|.++....                       ..  ...
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~--------~~~~~~kv~iK~~~~~~~-----------------------~~--~~~   62 (327)
T 3lzb_A           16 EFKKIKVLGSGAFGTVYKGLWIPE--------GEKVKIPVAIKELREATS-----------------------PK--ANK   62 (327)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECCT--------TCSCCEEEEEEEECCCSS-----------------------CC--CHH
T ss_pred             HceEEEEeeeCCCeEEEEEEEcCC--------CceEEEEEEEEeeccccC-----------------------HH--HHH
Confidence            399999999999999999998555        6655    5555543110                       00  011


Q ss_pred             HHHHHHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        112 WAEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ...+|+..|.++.+.+| .+-..+.....++||+|+. .|.....+..  ..++...+..++.||+.+|.+|| .+||||
T Consensus        63 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~~~~-~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH  140 (327)
T 3lzb_A           63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMP-FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-DRRLVH  140 (327)
T ss_dssp             HHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEECCCS-SCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEEecC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh-hCCCcC
Confidence            23468899998876653 2222233356789999996 4554444433  45888899999999999999999 599999


Q ss_pred             cCCCCCceEE-eCCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+ .++.++|+|||.|...
T Consensus       141 ~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A          141 RDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SCCCGGGEEEEETTEEEECCTTC----
T ss_pred             CCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            9999999999 4689999999999754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.77  E-value=1.5e-18  Score=171.72  Aligned_cols=138  Identities=14%  Similarity=0.123  Sum_probs=104.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||++....              ++.                .+
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~--------~~~vaiK~~~~~~--------------~~~----------------~~   96 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDS--------GELVAIKKVLQDK--------------RFK----------------NR   96 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEECCT--------------TSC----------------CH
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCC--------CcEEEEEEecccc--------------hhH----------------HH
Confidence            499999999999999999999666        9999999886421              111                24


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-------cceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-------KSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-------~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      |+.+|++|.+.+|. +...+..       ...+|||||++  |.....+.     ...++...+..++.||+.+|.+|| 
T Consensus        97 E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-  173 (420)
T 1j1b_A           97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-  173 (420)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC--EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc--ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            88889988776642 2111111       11468999995  43222221     245888889999999999999999 


Q ss_pred             hCCccccCCCCCceEEe-C-CeEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVH-K-ATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~-g~l~IIDFG~Av~~  214 (351)
                      .+|||||||||.|||++ + +.++|+|||.|...
T Consensus       174 ~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             TTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             HCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            59999999999999997 3 57899999999754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=3.2e-18  Score=158.80  Aligned_cols=148  Identities=16%  Similarity=0.100  Sum_probs=106.0

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      +.|.+.++||+|+||.||+|....+     ...+..||||+++.....                         .......
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~aiK~~~~~~~~-------------------------~~~~~~~   70 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQ-----AQNRIQCAIKSLSRITEM-------------------------QQVEAFL   70 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECS-----SSCEEEEEEEEETTCCSH-------------------------HHHHHHH
T ss_pred             eEEccCceeccCCCceEEEEEEecC-----CCceeeeeeeeccccccH-------------------------HHHHHHH
Confidence            3588899999999999999986332     001347999998642100                         0011235


Q ss_pred             HHHHHHHHhhhCCCC-ccccccc-cc-eEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        115 KEMRNLTRMYSEGLN-VPKPILL-KS-HVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       115 kE~~nL~rL~~~gi~-vP~pi~~-~~-~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +|+..|.+|.+.+|. +-..+.. .. .++||||+. +|.....+..  ..++...+..++.|++.+|.+|| ..|+|||
T Consensus        71 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~  148 (298)
T 3pls_A           71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMC-HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA-EQKFVHR  148 (298)
T ss_dssp             HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCT-TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEeccc-CCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH-hCCcccC
Confidence            688999998766532 2222211 22 389999995 4444444443  45788889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       149 dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          149 DLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             CCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             CCCcceEEEcCCCcEEeCcCCCcccc
Confidence            9999999995 579999999999643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.77  E-value=1.8e-18  Score=161.78  Aligned_cols=147  Identities=16%  Similarity=0.087  Sum_probs=104.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+...   .....++.||||+++.....                         .......+
T Consensus        28 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   79 (316)
T 2xir_A           28 RLKLGKPLGRGAFGQVIEADAFGI---DKTATCRTVAVKMLKEGATH-------------------------SEHRALMS   79 (316)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESS---SSTTCEEEEEEEEECTTCCH-------------------------HHHHHHHH
T ss_pred             heeeeeEEcCCCceeEEEEEEecC---CccccceEEEEEecccCCCc-------------------------HHHHHHHH
Confidence            489999999999999999984210   00012789999998753210                         01112357


Q ss_pred             HHHHHHHh-hhCCCCccccccc-----cceEEEEcccCcccccccccccC-----------------CCCHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL-----KSHVLLMTFIGEDGWPAAKLKDT-----------------PLTESGACKLYRE  172 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~~-----------------~l~~~~~~~l~~q  172 (351)
                      |+..|.++ .+.+|  +..+..     ...++||||+. .|.....+...                 .++...+..++.|
T Consensus        80 E~~~l~~l~~hp~i--v~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q  156 (316)
T 2xir_A           80 ELKILIHIGHHLNV--VNLLGACTKPGGPLMVIVEFCK-FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ  156 (316)
T ss_dssp             HHHHHHHHCCCTTB--CCEEEEECCTTSCCEEEEECCT-TEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHH
T ss_pred             HHHHHHhcccCCCe--eeEEEEEecCCCceEEEEEcCC-CCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHH
Confidence            89999999 44443  223221     23689999995 33333333221                 1677889999999


Q ss_pred             HHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        173 CVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       173 ll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+.+|.+|| ..|||||||||.|||++ ++.++|+|||.|...
T Consensus       157 i~~al~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  198 (316)
T 2xir_A          157 VAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDI  198 (316)
T ss_dssp             HHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             HHHHHHHHH-hCCcccccCccceEEECCCCCEEECCCcccccc
Confidence            999999999 59999999999999995 689999999999754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.77  E-value=2.8e-18  Score=160.82  Aligned_cols=138  Identities=18%  Similarity=0.233  Sum_probs=102.3

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |.+. +.||+|+||.||+|.+..+        |+.||||+++...                               ...+
T Consensus        19 y~~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~-------------------------------~~~~   59 (299)
T 3m2w_A           19 YKVTSQVLGLGINGKVLQIFNKRT--------QEKFALKMLQDCP-------------------------------KARR   59 (299)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECSH-------------------------------HHHH
T ss_pred             hhhcCcccccCCCeEEEEEEEcCC--------CcEEEEEEecccH-------------------------------HHHH
Confidence            6665 7899999999999998666        9999999986421                               1235


Q ss_pred             HHHHHHHh-hhCCC-Ccccccc-----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        116 EMRNLTRM-YSEGL-NVPKPIL-----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       116 E~~nL~rL-~~~gi-~vP~pi~-----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |+..+.++ .+.+| .+...+.     ....+|||||+. .|.....+..   ..++...+..++.||+.+|.+|| .+|
T Consensus        60 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~  137 (299)
T 3m2w_A           60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD-GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH-SIN  137 (299)
T ss_dssp             HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC-SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC-CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence            66666554 33332 2211121     123579999995 3444334433   25888999999999999999999 599


Q ss_pred             ccccCCCCCceEEe----CCeEEEEEccccccCC
Q psy10135        186 LVHADLSEYNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       186 lVH~DLkp~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      +|||||||.|||+.    ++.++|+|||.|....
T Consensus       138 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  171 (299)
T 3m2w_A          138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  171 (299)
T ss_dssp             EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred             cccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence            99999999999995    5789999999997664

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.77  E-value=1.9e-18  Score=162.70  Aligned_cols=142  Identities=15%  Similarity=0.072  Sum_probs=103.3

Q ss_pred             eeeecceeeecCceEEEEEEeC-CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPG-ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~-~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      -|++.+.||+|+||.||+|.+. .+        |+.||||+++........                   ..     ...
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~--------~~~vavK~~~~~~~~~~~-------------------~~-----~~~   59 (326)
T 1blx_A           12 QYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGM-------------------PL-----STI   59 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTT--------TEEEEEEEEEEEBCTTSC-------------------BC-----THH
T ss_pred             ceeeeeeecccccEEEEEEEecCCC--------CEEEEEEEeccCcccccC-------------------Cc-----hhh
Confidence            3999999999999999999984 44        889999999753211000                   00     013


Q ss_pred             HHHHHHHHh---hhCCCCcccccc---------ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHH
Q psy10135        115 KEMRNLTRM---YSEGLNVPKPIL---------LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       115 kE~~nL~rL---~~~gi~vP~pi~---------~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~  179 (351)
                      +|+..+++|   .+.+|  +..+.         ....+|||||++  |.....+..   ..++...+..++.||+.+|.+
T Consensus        60 ~e~~~l~~l~~~~h~~i--~~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~  135 (326)
T 1blx_A           60 REVAVLRHLETFEHPNV--VRLFDVCTVSRTDRETKLTLVFEHVD--QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF  135 (326)
T ss_dssp             HHHHHHHHHHHTCCTTB--CCEEEEEEEEECSSEEEEEEEEECCS--CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhccCCCCe--EeeeeeeeecccCCCceEEEEEecCC--CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            466666666   34432  22222         133579999995  544333332   348888999999999999999


Q ss_pred             HHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      || ..||||+||||.|||+. ++.++|+|||.|...
T Consensus       136 lH-~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  170 (326)
T 1blx_A          136 LH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  170 (326)
T ss_dssp             HH-HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             HH-HCCceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence            99 59999999999999994 689999999998654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.77  E-value=3e-18  Score=164.19  Aligned_cols=142  Identities=18%  Similarity=0.200  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+        |+.||||+++....                           ......+
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~---------------------------~~~~~~~   64 (373)
T 1q8y_A           20 RYILVRKLGWGHFSTVWLAKDMVN--------NTHVAMKIVRGDKV---------------------------YTEAAED   64 (373)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECSCHH---------------------------HHHHHHH
T ss_pred             eEEEEEeeeecCCeEEEEEEecCC--------CcEEEEEEecCCcc---------------------------chhhhhH
Confidence            499999999999999999998666        99999999875211                           1112356


Q ss_pred             HHHHHHHhhhCC---------CCccccccc---c-----ceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEG---------LNVPKPILL---K-----SHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVV  175 (351)
Q Consensus       116 E~~nL~rL~~~g---------i~vP~pi~~---~-----~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~  175 (351)
                      |+..|.++.+..         -.++..+..   .     ..++||||+|  |.....+.   ...++...+..++.||+.
T Consensus        65 e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~~i~~qi~~  142 (373)
T 1q8y_A           65 EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLG--ENLLALIKKYEHRGIPLIYVKQISKQLLL  142 (373)
T ss_dssp             HHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCC--EEHHHHHHHTTTSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCC--CCHHHHHHHhhccCCcHHHHHHHHHHHHH
Confidence            788888876431         012222222   1     4579999994  44443333   235888899999999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEeC-------CeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVHK-------ATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~~-------g~l~IIDFG~Av~~  214 (351)
                      +|.+||..+|||||||||.|||+..       +.++|+|||.|...
T Consensus       143 aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~  188 (373)
T 1q8y_A          143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY  188 (373)
T ss_dssp             HHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred             HHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccccc
Confidence            9999995339999999999999941       27999999999754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.77  E-value=2e-18  Score=168.49  Aligned_cols=137  Identities=19%  Similarity=0.207  Sum_probs=99.8

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      .++||+|+||.||+|.+..+        |+.||||+++.....                          ......+|+.+
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~--------g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~  139 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETAT--------GLKLAAKIIKTRGMK--------------------------DKEEVKNEISV  139 (373)
T ss_dssp             EEECC-----CEEEEEETTT--------CCEEEEEEEECCSHH--------------------------HHHHHHHHHHH
T ss_pred             ceEEecCcCEEEEEEEEcCC--------CcEEEEEEEcccccc--------------------------cHHHHHHHHHH
Confidence            67899999999999998666        999999999863210                          01123578999


Q ss_pred             HHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        120 LTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |.+|.+.+|  ++.+..    ...+|||||+. .|.....+..  ..++..++..++.||+.+|.+|| ..|||||||||
T Consensus       140 l~~l~hpnI--v~~~~~~~~~~~~~lv~E~~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp  215 (373)
T 2x4f_A          140 MNQLDHANL--IQLYDAFESKNDIVLVMEYVD-GGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-QMYILHLDLKP  215 (373)
T ss_dssp             HTTCCCTTB--CCEEEEEECSSEEEEEEECCT-TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCG
T ss_pred             HHhCCCCCC--CeEEEEEEECCEEEEEEeCCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCH
Confidence            999977653  333322    44589999995 3444333432  35888889999999999999999 59999999999


Q ss_pred             CceEEe---CCeEEEEEccccccC
Q psy10135        194 YNMLVH---KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~---~g~l~IIDFG~Av~~  214 (351)
                      .|||+.   ++.++|+|||.|...
T Consensus       216 ~NIll~~~~~~~~kl~DFG~a~~~  239 (373)
T 2x4f_A          216 ENILCVNRDAKQIKIIDFGLARRY  239 (373)
T ss_dssp             GGEEEEETTTTEEEECCCSSCEEC
T ss_pred             HHEEEecCCCCcEEEEeCCCceec
Confidence            999993   368999999999754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.77  E-value=8.6e-19  Score=165.54  Aligned_cols=146  Identities=16%  Similarity=0.177  Sum_probs=106.2

Q ss_pred             cCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHH
Q psy10135         33 RGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTW  112 (351)
Q Consensus        33 ~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~  112 (351)
                      .+--|.+.+.||+|+||.||+|.. .+        |+.||||+++.....  .      ...                 .
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-~~--------~~~vavK~~~~~~~~--~------~~~-----------------~   73 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRL-AD--------GTLVAVKRLKEERTQ--G------GEL-----------------Q   73 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECC-SS--------SCCEEEEECCC-------------CCC-----------------H
T ss_pred             HhhccccceeEecCCCcEEEEEEe-cC--------CCEEEEEEeccccCc--h------HHH-----------------H
Confidence            344589999999999999999986 56        899999998753210  0      000                 1


Q ss_pred             HHHHHHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhC-
Q psy10135        113 AEKEMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKC-  184 (351)
Q Consensus       113 aekE~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~-  184 (351)
                      ..+|+..|.++.+.+|. +-..+. ....+|||||+. .|.....+..     ..++...+..++.|++.+|.+||. . 
T Consensus        74 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~  151 (326)
T 3uim_A           74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA-NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD-HC  151 (326)
T ss_dssp             HHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCT-TCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH-SS
T ss_pred             HHHHHHHHHhccCCCccceEEEEecCCceEEEEEecc-CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence            34678888888766532 111111 245589999995 3444333332     237888899999999999999995 7 


Q ss_pred             --CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 --HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 --glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                        |+|||||||.|||+. ++.++|+|||.|...
T Consensus       152 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  184 (326)
T 3uim_A          152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM  184 (326)
T ss_dssp             SSCEECCCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CCCeEeCCCchhhEEECCCCCEEeccCcccccc
Confidence              999999999999995 579999999999754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.77  E-value=2.8e-18  Score=161.10  Aligned_cols=141  Identities=17%  Similarity=0.178  Sum_probs=103.7

Q ss_pred             eeeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         36 VSEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        36 ~y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      .|.|. +.||+|+||.||+|.+..+        |+.||||+++.....                          ......
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~--------------------------~~~~~~   58 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLIT--------SQEYAVKIIEKQPGH--------------------------IRSRVF   58 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSS--------CCEEEEEEEECCSSC--------------------------CHHHHH
T ss_pred             eEEecCceecCCceEEEEEEEEcCC--------CcEEEEEEEeeCcch--------------------------hHHHHH
Confidence            48885 7899999999999998666        999999998753100                          011234


Q ss_pred             HHHHHHHHh-hhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        115 KEMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       115 kE~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +|+..|.++ .+.+|  ++.+..    ...+|||||+. +|.....+.. ..++..++..++.||+.+|.+|| ..||||
T Consensus        59 ~E~~~l~~~~~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH  134 (316)
T 2ac3_A           59 REVEMLYQCQGHRNV--LELIEFFEEEDRFYLVFEKMR-GGSILSHIHKRRHFNELEASVVVQDVASALDFLH-NKGIAH  134 (316)
T ss_dssp             HHHHHHHHTCCCTTB--CCEEEEEEETTEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHHHHhcCCCCe--eeEEEEEeeCCEEEEEEEcCC-CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCcee
Confidence            688888885 34442  233322    45689999995 3444333332 46888899999999999999999 589999


Q ss_pred             cCCCCCceEEeC-Ce---EEEEEccccccC
Q psy10135        189 ADLSEYNMLVHK-AT---LFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~~-g~---l~IIDFG~Av~~  214 (351)
                      |||||.|||+.. +.   ++|+|||.+...
T Consensus       135 ~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A          135 RDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             CCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             CCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            999999999953 43   999999998643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.77  E-value=1.9e-18  Score=174.58  Aligned_cols=155  Identities=19%  Similarity=0.176  Sum_probs=106.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        ++.||||+++.......   ++...         ..+. ........+|
T Consensus        38 Y~~~~~lG~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~~~---~~~~~---------~~~~-~~~~~~~~~E   96 (504)
T 3q5i_A           38 YFKVRKLGSGAYGEVLLCKEKNG--------HSEKAIKVIKKSQFDKG---RYSDD---------NKNI-EKFHEEIYNE   96 (504)
T ss_dssp             EEEEEEEEC--CEEEEEEEETTT--------CCEEEEEEEEC-----------------------------CTHHHHHHH
T ss_pred             eEEEeEecccCCeEEEEEEECCC--------CcEEEEEEEEhhhcccc---ccccc---------chhh-HHHHHHHHHH
Confidence            99999999999999999998666        89999999986432110   00000         0000 0112234679


Q ss_pred             HHHHHHhhhCCCC-ccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|++|.+.+|. +-..+.. ...+|||||+. +|.....+. ...++...+..++.||+.+|.+|| .+|||||||||
T Consensus        97 ~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp  174 (504)
T 3q5i_A           97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE-GGELFEQIINRHKFDECDAANIMKQILSGICYLH-KHNIVHRDIKP  174 (504)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSG
T ss_pred             HHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCcH
Confidence            9999999776532 2222222 34579999995 344433333 356899999999999999999999 59999999999


Q ss_pred             CceEEeC-C---eEEEEEccccccC
Q psy10135        194 YNMLVHK-A---TLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~~-g---~l~IIDFG~Av~~  214 (351)
                      .|||+.. +   .++|+|||.|...
T Consensus       175 ~Nil~~~~~~~~~~kl~Dfg~a~~~  199 (504)
T 3q5i_A          175 ENILLENKNSLLNIKIVDFGLSSFF  199 (504)
T ss_dssp             GGEEESSTTCCSSEEECCCTTCEEC
T ss_pred             HHEEEecCCCCccEEEEECCCCEEc
Confidence            9999954 3   6999999999654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.76  E-value=9.5e-19  Score=169.92  Aligned_cols=145  Identities=14%  Similarity=0.122  Sum_probs=102.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.....   .....++.||||+++.....                         .......+|
T Consensus        73 ~~~~~~LG~G~fg~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E  124 (367)
T 3l9p_A           73 ITLIRGLGHGAFGEVYEGQVSGM---PNDPSPLQVAVKTLPEVCSE-------------------------QDELDFLME  124 (367)
T ss_dssp             EEEEEECCCCSSSCEEEEEECC--------CCEEEEEEECCSSCCH-------------------------HHHHHHHHH
T ss_pred             eEEeeEeeeCCCEEEEEEEEccC---CCCCcceeEEEEecccccCh-------------------------hhHHHHHHH
Confidence            78999999999999999985211   00112788999998642110                         011123568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--------CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--------TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--------~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +..|.+|.+.+|  +..+..    ...+|||||+. +|.+...+..        ..++..++..++.||+.+|.+|| ..
T Consensus       125 ~~~l~~l~hpnI--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~  200 (367)
T 3l9p_A          125 ALIISKFNHQNI--VRCIGVSLQSLPRFILLELMA-GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-EN  200 (367)
T ss_dssp             HHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHhCCCCCC--CeEEEEEecCCCCEEEEEeCC-CCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH-hC
Confidence            889999876653  222221    34589999995 3333333322        24788889999999999999999 59


Q ss_pred             CccccCCCCCceEEe-CC---eEEEEEcccccc
Q psy10135        185 HLVHADLSEYNMLVH-KA---TLFIIDVAQSVE  213 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g---~l~IIDFG~Av~  213 (351)
                      |||||||||.|||+. +|   .++|+|||.|..
T Consensus       201 ~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~  233 (367)
T 3l9p_A          201 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD  233 (367)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred             CeeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence            999999999999995 23   599999999963

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.76  E-value=1.1e-18  Score=170.24  Aligned_cols=144  Identities=16%  Similarity=0.123  Sum_probs=101.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.....     ...+..||||+++.....                         .......+|
T Consensus        47 ~~~~~~lG~G~fg~Vy~~~~~~~-----~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~E   96 (373)
T 2qol_A           47 ISIDKVVGAGEFGEVCSGRLKLP-----SKKEISVAIKTLKVGYTE-------------------------KQRRDFLGE   96 (373)
T ss_dssp             CCCCEEEEECSSSEEEEC-CBCT-----TSCBCCEEEEECCTTCCH-------------------------HHHHHHHHH
T ss_pred             ceeeeEEeeCCCeEEEEEEEecC-----CCCceeEEEEEecCccCH-------------------------HHHHHHHHH
Confidence            88999999999999999987311     011778999998753210                         011223568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|  ++.+..    ...+|||||+. +|.....+..  ..++..++..++.||+.+|.+|| ..||||||
T Consensus        97 ~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~D  172 (373)
T 2qol_A           97 ASIMGQFDHPNI--IRLEGVVTKSKPVMIVTEYME-NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS-DMGYVHRD  172 (373)
T ss_dssp             HHHHTTCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSC
T ss_pred             HHHHHhCCCCCC--CeEEEEEeeCCceEEEEeCCC-CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCC
Confidence            899998876653  233322    34689999995 3444333433  35888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||++ ++.++|+|||.|...
T Consensus       173 lkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          173 LAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             CCGGGEEECTTCCEEECCC------
T ss_pred             CCcceEEEcCCCCEEECcCcccccc
Confidence            999999995 589999999998754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.76  E-value=3.6e-18  Score=161.96  Aligned_cols=141  Identities=16%  Similarity=0.093  Sum_probs=106.7

Q ss_pred             eeeecceeeecCceEEEEEEe----CCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASP----GANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~----~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||+|+||.||+|..    ..+        |+.||||+++....                          ....
T Consensus        42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~--------~~~vavK~~~~~~~--------------------------~~~~   87 (326)
T 2w1i_A           42 HLKFLQQLGKGNFGSVEMCRYDPLQDNT--------GEVVAVKKLQHSTE--------------------------EHLR   87 (326)
T ss_dssp             GEEEEEEEECCSSEEEEEEEECTTSSSC--------CEEEEEEEESSCCS--------------------------HHHH
T ss_pred             HceeeeeeccCCCeEEEEEEeccccCCC--------ceEEEEEEeccCCH--------------------------HHHH
Confidence            389999999999999999983    234        89999999875311                          0011


Q ss_pred             HHHHHHHHHHHhhhCCCCccccccc------cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      ...+|+..|.+|.+.+|  +..+..      ...+|||||+. .|.....+..  ..++..++..++.||+.+|.+|| .
T Consensus        88 ~~~~E~~~l~~l~h~~i--v~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~  163 (326)
T 2w1i_A           88 DFEREIEILKSLQHDNI--VKYKGVCYSAGRRNLKLIMEYLP-YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG-T  163 (326)
T ss_dssp             HHHHHHHHHHTCCCTTB--CCEEEEECC----CCEEEECCCT-TCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHhCCCCCe--eeEEEEEEecCCCceEEEEECCC-CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-h
Confidence            23578999999976653  222221      24589999995 3333333333  34888899999999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .||||+||||.|||+. ++.++|+|||.|...
T Consensus       164 ~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          164 KRYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            9999999999999995 689999999999754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.76  E-value=1.1e-18  Score=163.77  Aligned_cols=148  Identities=14%  Similarity=0.093  Sum_probs=101.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.....     .+.+..||||+++......                      ..  .....+
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~vavK~~~~~~~~~----------------------~~--~~~~~~   85 (313)
T 3brb_A           35 LLILGKILGEGEFGSVMEGNLKQE-----DGTSLKVAVKTMKLDNSSQ----------------------RE--IEEFLS   85 (313)
T ss_dssp             GEEEEEEEEC-CCCCEEEEEEECT-----TSCEEEEEEEEC---CCCH----------------------HH--HHHHHH
T ss_pred             HeeeccceeecCCeEEEEEEEecc-----CCceeEEEEEEEeccccch----------------------hH--HHHHHH
Confidence            499999999999999999976332     1125689999987532110                      00  112356


Q ss_pred             HHHHHHHhhhCCCC-ccccccc------cceEEEEcccCccccccccc-------ccCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL------KSHVLLMTFIGEDGWPAAKL-------KDTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~------~~~vLVMEfig~~G~~~~~L-------~~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      |+..|.+|.+.+|. +...+..      ...++||||+. .|.....+       ....++..++..++.||+.+|.+||
T Consensus        86 e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  164 (313)
T 3brb_A           86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK-YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS  164 (313)
T ss_dssp             HHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCT-TCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEeccc-CCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence            88999999776532 2221111      12389999995 33332222       1235888999999999999999999


Q ss_pred             hhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        182 NKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 ~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       .+|||||||||.|||+. ++.++|+|||.|...
T Consensus       165 -~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~  197 (313)
T 3brb_A          165 -NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI  197 (313)
T ss_dssp             -TTTCCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred             -hCCcccCCCCcceEEEcCCCcEEEeecCcceec
Confidence             59999999999999995 579999999999654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.76  E-value=3.2e-18  Score=162.07  Aligned_cols=147  Identities=12%  Similarity=0.091  Sum_probs=106.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.+..+   .....+..||||+++.....                         .......+
T Consensus        47 ~~~~~~~lG~G~~g~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   98 (333)
T 2i1m_A           47 NLQFGKTLGAGAFGKVVEATAFGL---GKEDAVLKVAVKMLKSTAHA-------------------------DEKEALMS   98 (333)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTC---SSSCCCCEEEEEEECTTCCH-------------------------HHHHHHHH
T ss_pred             HceeeeEeccCCCcceEEEEecCC---CcccchhHHHHHhcccccCh-------------------------HHHHHHHH
Confidence            489999999999999999997443   00011348999998753210                         01123457


Q ss_pred             HHHHHHHh-hhCCCCccccccc----cceEEEEcccCcccccccccc---------------cCCCCHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK---------------DTPLTESGACKLYRECVV  175 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~---------------~~~l~~~~~~~l~~qll~  175 (351)
                      |+..|.+| .+.+|  +..+..    ...+|||||+. .|.....+.               ...++...+..++.||+.
T Consensus        99 E~~~l~~l~~h~~i--v~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~  175 (333)
T 2i1m_A           99 ELKIMSHLGQHENI--VNLLGACTHGGPVLVITEYCC-YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ  175 (333)
T ss_dssp             HHHHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCCCe--eeEEEEEecCCceEEEEecCC-CCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHH
Confidence            89999999 55543  333322    45689999995 333322222               234788889999999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.+|| ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       176 ~l~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  214 (333)
T 2i1m_A          176 GMAFLA-SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI  214 (333)
T ss_dssp             HHHHHH-HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCG
T ss_pred             HHHHHh-cCCcccCCcccceEEECCCCeEEECcccccccc
Confidence            999999 58999999999999995 589999999999743

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.76  E-value=4e-18  Score=158.67  Aligned_cols=148  Identities=16%  Similarity=0.084  Sum_probs=105.4

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      ..|.+.+.||+|+||.||+|....+     .+.+..||+|+++....                       .  .......
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~avk~~~~~~~-----------------------~--~~~~~~~   74 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDN-----DGKKIHCAVKSLNRITD-----------------------I--GEVSQFL   74 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC----------CEEEEEEEETTCCS-----------------------H--HHHHHHH
T ss_pred             eehhhcceeeecCCceEEEEEEecC-----CCceeEEEEEecccCCC-----------------------H--HHHHHHH
Confidence            3599999999999999999986322     01134689998864210                       0  0111235


Q ss_pred             HHHHHHHHhhhCCC-Cccccc-c-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        115 KEMRNLTRMYSEGL-NVPKPI-L-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       115 kE~~nL~rL~~~gi-~vP~pi-~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +|+..|+++.+.+| ++-..+ . ....++||||++ .|.....+..  ..++..++..++.||+.+|.+|| ..|+|||
T Consensus        75 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH-~~~i~H~  152 (298)
T 3f66_A           75 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK-HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-SKKFVHR  152 (298)
T ss_dssp             HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCT-TCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCC-CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-hCCccCC
Confidence            68889999977653 222221 1 134589999995 3444333432  34788889999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       153 dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          153 DLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             CCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             CCchheEEECCCCCEEECcccccccc
Confidence            9999999995 579999999999754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.76  E-value=3.3e-18  Score=160.23  Aligned_cols=143  Identities=20%  Similarity=0.208  Sum_probs=107.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++..... .                         .....+|
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~-~-------------------------~~~~~~e   56 (304)
T 2jam_A           11 FIFMEVLGSGAFSEVFLVKQRLT--------GKLFALKCIKKSPAF-R-------------------------DSSLENE   56 (304)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEECC--------------------------------HHHHH
T ss_pred             ceeeeeccCCCCceEEEEEECCC--------CCEEEEEEEeccccc-c-------------------------hHHHHHH
Confidence            89999999999999999998666        999999999753210 0                         0113468


Q ss_pred             HHHHHHhhhCCCCcc-ccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGLNVP-KPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP-~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.+|.+.+|... ..+.. ...++||||+. +|.....+. ...++..++..++.||+.+|.+|| ..|++|+||||
T Consensus        57 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dikp  134 (304)
T 2jam_A           57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS-GGELFDRILERGVYTEKDASLVIQQVLSAVKYLH-ENGIVHRDLKP  134 (304)
T ss_dssp             HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCSCCG
T ss_pred             HHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC-CccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCH
Confidence            899999977664221 11111 34589999995 333333332 346888899999999999999999 59999999999


Q ss_pred             CceEE---e-CCeEEEEEccccccCC
Q psy10135        194 YNMLV---H-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi---~-~g~l~IIDFG~Av~~~  215 (351)
                      .|||+   . ++.++|+|||.|....
T Consensus       135 ~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A          135 ENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             GGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             HHEEEecCCCCCCEEEccCCcceecC
Confidence            99999   3 4789999999986543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.76  E-value=2.3e-18  Score=161.54  Aligned_cols=139  Identities=18%  Similarity=0.156  Sum_probs=103.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++....        .                    ....+
T Consensus        30 ~y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~--------~--------------------~~~~~   73 (314)
T 3com_A           30 VFDVLEKLGEGSYGSVYKAIHKET--------GQIVAIKQVPVESD--------L--------------------QEIIK   73 (314)
T ss_dssp             CEEEEEECC----CEEEEEEETTT--------CCEEEEEEEETTSC--------C--------------------HHHHH
T ss_pred             hhhhheeeccCCCeEEEEEEECCC--------CCEEEEEecCchHH--------H--------------------HHHHH
Confidence            499999999999999999998666        99999999875210        0                    01246


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.++.+.+|  +..+.    ....+|||||++ .|.....+.  ...++...+..++.+|+.+|.+|| ..|+||+
T Consensus        74 e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~  149 (314)
T 3com_A           74 EISIMQQCDSPHV--VKYYGSYFKNTDLWIVMEYCG-AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH-FMRKIHR  149 (314)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEEEETTEEEEEEECCT-TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECC
T ss_pred             HHHHHHhCCCCCC--ccEEEEEEeCCEEEEEeecCC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcCC
Confidence            8888998876653  23332    244589999995 233322232  356889999999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.+...
T Consensus       150 dl~p~Nil~~~~~~~kl~dfg~~~~~  175 (314)
T 3com_A          150 DIKAGNILLNTEGHAKLADFGVAGQL  175 (314)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CcCHHHEEECCCCCEEEeecccchhh
Confidence            9999999994 689999999999654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.76  E-value=1e-18  Score=160.99  Aligned_cols=144  Identities=14%  Similarity=0.090  Sum_probs=107.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++......                        .......+
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~------------------------~~~~~~~~   54 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRKSD--------GKILVWKELDYGSMTE------------------------AEKQMLVS   54 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEECTTCCH------------------------HHHHHHHH
T ss_pred             heeeehhccCCCCcEEEEEEECCC--------CcEEEEEEEEcccCCH------------------------HHHHHHHH
Confidence            489999999999999999998666        9999999997632111                        11223457


Q ss_pred             HHHHHHHhhhCCCCcccccc------ccceEEEEcccCccccccccccc-----CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL------LKSHVLLMTFIGEDGWPAAKLKD-----TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~------~~~~vLVMEfig~~G~~~~~L~~-----~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      |+..|.++.+.+|  +..+.      ....++||||+. .|.....+..     ..++...+..++.||+.+|.+||. .
T Consensus        55 e~~~l~~l~h~~i--~~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~  130 (279)
T 2w5a_A           55 EVNLLRELKHPNI--VRYYDRIIDRTNTTLYIVMEYCE-GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR-R  130 (279)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEEEGGGTEEEEEEECCT-TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHhcCCCCC--CeEEEEEecCCCceEEEEEeCCC-CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-c
Confidence            8999999977654  22332      134589999994 2333332321     238888999999999999999995 7


Q ss_pred             C-----ccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        185 H-----LVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       185 g-----lVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |     +||+||||.|||+. ++.++|+|||.+....
T Consensus       131 ~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~  167 (279)
T 2w5a_A          131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  167 (279)
T ss_dssp             C------CCCCCSGGGEEECSSSCEEECCCCHHHHC-
T ss_pred             cCCCCeeEEeccchhhEEEcCCCCEEEecCchheeec
Confidence            7     99999999999995 6889999999987654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.76  E-value=1.8e-18  Score=172.73  Aligned_cols=140  Identities=16%  Similarity=0.125  Sum_probs=106.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.. ..        +..||||+++.....                           .....+|
T Consensus       186 ~~~~~~lG~G~fg~Vy~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~E  229 (452)
T 1fmk_A          186 LRLEVKLGQGCFGEVWMGTW-NG--------TTRVAIKTLKPGTMS---------------------------PEAFLQE  229 (452)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TT--------TEEEEEEECCTTSSC---------------------------HHHHHHH
T ss_pred             ceeeeeecCCCCeEEEEEEE-CC--------CceEEEEEeccCCCC---------------------------HHHHHHH
Confidence            78899999999999999998 44        678999998753210                           0113568


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|++|.+.+| .+...+.....+|||||+. .|.....+..   ..++..++..++.||+.+|.+|| .+||||||||
T Consensus       230 ~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~-~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivHrDlk  307 (452)
T 1fmk_A          230 AQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS-KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLR  307 (452)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSCEEEECCCT-TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCS
T ss_pred             HHHHHhCCCCCEeeEEEEEcCCceEEEehhhc-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCC
Confidence            999999977653 2222222355689999995 4444444432   34888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       308 p~Nill~~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          308 AANILVGENLVCKVADFGLARLI  330 (452)
T ss_dssp             GGGEEECGGGCEEECCCCTTC--
T ss_pred             hhhEEECCCCCEEECCCccceec
Confidence            9999995 579999999999754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.76  E-value=1.3e-18  Score=182.97  Aligned_cols=144  Identities=16%  Similarity=0.165  Sum_probs=105.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.........                       ......|
T Consensus       343 f~~~~~LG~G~fG~V~~~~~~~~--------~~~vAvK~l~~~~~~~~~~-----------------------~~~~~~E  391 (674)
T 3pfq_A          343 FNFLMVLGKGSFGKVMLSERKGT--------DELYAVKILKKDVVIQDDD-----------------------VECTMVE  391 (674)
T ss_dssp             EEEEEESSBTTTBCEEEEEESSS--------CCEEEEEEEEHHHHHHTTT-----------------------THHHHHH
T ss_pred             eEEEEEEccCCCEEEEEEEECCC--------CcEEEEEEEeccccccHHH-----------------------HHHHHHH
Confidence            89999999999999999998666        8999999997532110000                       0112346


Q ss_pred             HHHHHHhhh-CCCC-ccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYS-EGLN-VPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~-~gi~-vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ..+|..+.. ..|. .-..+.. ...+|||||+. +|.+...+.. ..++...++.++.||+.+|.+|| ..||||||||
T Consensus       392 ~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~-gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH-~~gIiHrDLK  469 (674)
T 3pfq_A          392 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN-GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ-SKGIIYRDLK  469 (674)
T ss_dssp             HHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTSEECCCCC
T ss_pred             HHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeEeccCC
Confidence            677766532 2221 1111111 34579999995 4444444443 46899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEcccccc
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |+|||++ +|.++|+|||+|..
T Consensus       470 p~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          470 LDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             STTEEECSSSCEEECCCTTCEE
T ss_pred             hhhEEEcCCCcEEEeecceeec
Confidence            9999995 68999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.76  E-value=4.2e-18  Score=159.68  Aligned_cols=143  Identities=15%  Similarity=0.143  Sum_probs=101.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....                     +  ........+|
T Consensus        34 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~---------------------~--~~~~~~~~~E   82 (310)
T 2wqm_A           34 FRIEKKIGRGQFSEVYRAACLLD--------GVPVALKKVQIFDLM---------------------D--AKARADCIKE   82 (310)
T ss_dssp             EEEEEEEECC--CEEEEEEETTT--------CCEEEEEEECTTSSC---------------------C--HHHHHHHHHH
T ss_pred             eEEEEeecCCCCceEEEEEEcCC--------CceEEEEeeehhhcc---------------------C--HHHHHHHHHH
Confidence            99999999999999999998666        999999998752110                     0  0112224578


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      +..|.+|.+.+|  +..+.    ....++||||+. .|.....+.     ...++...+..++.||+.+|.+|| ..|+|
T Consensus        83 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~  158 (310)
T 2wqm_A           83 IDLLKQLNHPNV--IKYYASFIEDNELNIVLELAD-AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH-SRRVM  158 (310)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEEETTEEEEEEECCC-SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred             HHHHHhCCCCCE--eeEEEEEEcCCcEEEEEecCC-CCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh-hCCee
Confidence            999999976653  22332    245679999995 233322222     235788899999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |+||||.|||+. ++.++|+|||.+...
T Consensus       159 H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          159 HRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             CCCCCGGGEEECTTSCEEECCC------
T ss_pred             CCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            999999999995 689999999998654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.76  E-value=1.6e-18  Score=163.07  Aligned_cols=147  Identities=19%  Similarity=0.163  Sum_probs=105.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+...   .....++.||||+++.....                       .  ......+
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~~vaiK~~~~~~~~-----------------------~--~~~~~~~   77 (322)
T 1p4o_A           26 KITMSRELGQGSFGMVYEGVAKGV---VKDEPETRVAIKTVNEAASM-----------------------R--ERIEFLN   77 (322)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEE---ETTEEEEEEEEEECCTTSCH-----------------------H--HHHHHHH
T ss_pred             heeeeeEeccCCceEEEeeeecCc---cCCCCceEEEEEecccccCH-----------------------H--HHHHHHH
Confidence            389999999999999999976310   00012678999998642110                       0  0112346


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-----------CCCCHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-----------TPLTESGACKLYRECVVMMWRL  180 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-----------~~l~~~~~~~l~~qll~~L~~L  180 (351)
                      |+..|+++.+.+|  +..+..    ...++||||+. .|.....+..           ..++...+..++.||+.+|.+|
T Consensus        78 E~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  154 (322)
T 1p4o_A           78 EASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMT-RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL  154 (322)
T ss_dssp             HHHHGGGCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCE--eeeEEEEccCCccEEEEEeCC-CCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence            8888988876653  233322    45689999995 3333332321           3467888999999999999999


Q ss_pred             HhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        181 YNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       181 H~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      | ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       155 H-~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~  188 (322)
T 1p4o_A          155 N-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  188 (322)
T ss_dssp             H-HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred             H-HCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence            9 58999999999999995 579999999998643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.76  E-value=2.4e-18  Score=175.79  Aligned_cols=140  Identities=16%  Similarity=0.125  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+ ..        +..||||+++.....                           .....+|
T Consensus       269 ~~~~~~lG~G~fg~Vy~~~~-~~--------~~~vavK~~~~~~~~---------------------------~~~~~~E  312 (535)
T 2h8h_A          269 LRLEVKLGQGCFGEVWMGTW-NG--------TTRVAIKTLKPGTMS---------------------------PEAFLQE  312 (535)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TT--------TEEEEEEEECTTSSC---------------------------HHHHHHH
T ss_pred             hhhheecccCCCeEEEEEEE-CC--------CceEEEEEeCCCCCC---------------------------HHHHHHH
Confidence            78899999999999999998 44        678999999763210                           0113568


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|++|.+.+| .+-..+.....+|||||+. .|.+...|..   ..++..++..++.||+.+|.+|| .+||||||||
T Consensus       313 ~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlk  390 (535)
T 2h8h_A          313 AQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS-KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLR  390 (535)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSCEEEECCCT-TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCS
T ss_pred             HHHHHhCCCCCEeeEEEEEeeccceEeeehhc-CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCC
Confidence            999999977653 2222222355689999995 4444444432   34888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||+|...
T Consensus       391 p~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          391 AANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             GGGEEECGGGCEEECCTTSTTTC
T ss_pred             HhhEEEcCCCcEEEcccccceec
Confidence            9999995 579999999999754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.76  E-value=2.9e-18  Score=160.52  Aligned_cols=141  Identities=19%  Similarity=0.151  Sum_probs=93.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||.|+||.||+|.+..+        |+.||||+++......                       ...+ ....+
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~-----------------------~~~~-~~~~~   74 (318)
T 2dyl_A           27 LENLGEMGSGTCGQVWKMRFRKT--------GHVIAVKQMRRSGNKE-----------------------ENKR-ILMDL   74 (318)
T ss_dssp             EEEEEEC------CEEEEEETTT--------CCEEEEEEEETTSCHH-----------------------HHHH-HHHHH
T ss_pred             ccccceeeecCCeeEEEEEEecC--------CeEEEEEEecccccch-----------------------HHHH-HHHHH
Confidence            78899999999999999999666        9999999997632100                       0001 11122


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      ...+..+.+.+|  +..+..    ...+|||||++  +. +..+.   ...++...+..++.||+.+|.+||.++|+||+
T Consensus        75 ~~~~~~~~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~-~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~  149 (318)
T 2dyl_A           75 DVVLKSHDCPYI--VQCFGTFITNTDVFIAMELMG--TC-AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR  149 (318)
T ss_dssp             HHHHHTTTCTTB--CCEEEEEECSSEEEEEECCCS--EE-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHhcCCCce--eeEEEEEecCCcEEEEEeccC--Cc-HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC
Confidence            334444444432  222221    44589999995  22 22221   35688889999999999999999954599999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       150 dlkp~Nil~~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          150 DVKPSNILLDERGQIKLCDFGISGRL  175 (318)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTC---
T ss_pred             CCCHHHEEECCCCCEEEEECCCchhc
Confidence            9999999995 689999999998654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.76  E-value=1.1e-18  Score=170.92  Aligned_cols=139  Identities=19%  Similarity=0.195  Sum_probs=96.6

Q ss_pred             eeec-ceeeecCceEEEEEEeC--CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         37 SEVN-GCISTGKEANVYHASPG--ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~--~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      |++. ..||+|+||.||+|...  .+        ++.||||+++.....                            ...
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~--------~~~vaiK~~~~~~~~----------------------------~~~   65 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKD--------DKDYALKQIEGTGIS----------------------------MSA   65 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSC--------CCCEEEEECSSSSCC----------------------------HHH
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCC--------CeEEEEEEECCCCCC----------------------------HHH
Confidence            7775 47999999999999963  24        789999998642100                            013


Q ss_pred             HHHHHHHHHhhhCCC-Ccccccc---ccceEEEEcccCcccccccccc----------cCCCCHHHHHHHHHHHHHHHHH
Q psy10135        114 EKEMRNLTRMYSEGL-NVPKPIL---LKSHVLLMTFIGEDGWPAAKLK----------DTPLTESGACKLYRECVVMMWR  179 (351)
Q Consensus       114 ekE~~nL~rL~~~gi-~vP~pi~---~~~~vLVMEfig~~G~~~~~L~----------~~~l~~~~~~~l~~qll~~L~~  179 (351)
                      .+|+..|.+|.+.+| .+-..+.   ....+|||||++  |.....+.          ...++...+..++.||+.+|.+
T Consensus        66 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~  143 (405)
T 3rgf_A           66 CREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE--HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY  143 (405)
T ss_dssp             HHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS--EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC--CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            468999999987664 2222221   234589999995  43332222          1248888999999999999999


Q ss_pred             HHhhCCccccCCCCCceEE----e-CCeEEEEEccccccC
Q psy10135        180 LYNKCHLVHADLSEYNMLV----H-KATLFIIDVAQSVEH  214 (351)
Q Consensus       180 LH~~~glVH~DLkp~NILi----~-~g~l~IIDFG~Av~~  214 (351)
                      || ..|||||||||.|||+    . ++.++|+|||.|...
T Consensus       144 LH-~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          144 LH-ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             HH-HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             HH-hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence            99 5999999999999999    2 378999999999754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.76  E-value=2.1e-18  Score=160.64  Aligned_cols=138  Identities=20%  Similarity=0.161  Sum_probs=104.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||+|++......                     .     .....+
T Consensus        20 ~y~i~~~lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~~---------------------~-----~~~~~~   65 (302)
T 2j7t_A           20 VWEIVGELGDGAFGKVYKAKNKET--------GALAAAKVIETKSEE---------------------E-----LEDYIV   65 (302)
T ss_dssp             TEEEEEEEECSTTCCEEEEEETTT--------CCEEEEEEEC----C---------------------C-----HHHHHH
T ss_pred             ceeecceeccCCCeEEEEEEEcCC--------CcEEEEEEecCCCHH---------------------H-----HHHHHH
Confidence            599999999999999999999666        899999998753110                     0     011246


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccc-cc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAK-LK--DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~-L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|.++.+.+|  +..+.    ....++||||+.  |..+.. +.  ...++...+..++.||+.+|.+|| ..|+||
T Consensus        66 e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H  140 (302)
T 2j7t_A           66 EIEILATCDHPYI--VKLLGAYYHDGKLWIMIEFCP--GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH-SKRIIH  140 (302)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEEECC-CEEEEEECCT--TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHhcCCCCCE--eeeeeeeeeCCeEEEEEEeCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh-cCCccc
Confidence            8888988876653  22332    245689999995  433322 22  346889999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccc
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av  212 (351)
                      +||||.|||+. ++.++|+|||.|.
T Consensus       141 ~dlkp~Nil~~~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A          141 RDLKAGNVLMTLEGDIRLADFGVSA  165 (302)
T ss_dssp             CCCSGGGEEECTTSCEEECCCHHHH
T ss_pred             CCCCHHHEEECCCCCEEEEECCCCc
Confidence            99999999996 6899999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.76  E-value=1.2e-18  Score=167.03  Aligned_cols=154  Identities=15%  Similarity=0.107  Sum_probs=102.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+     ...+..+|||++......+.......               +.+......+
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~aiK~~~~~~~~~~~e~~~~---------------~~~~~~~~~~   97 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNK-----PEKDARHVVKVEYQENGPLFSELKFY---------------QRVAKKDCIK   97 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSS-----CGGGCCEEEEEEECC-CHHHHHHHHH---------------HHHCCHHHHH
T ss_pred             eEEEEeeEeecCCeEEEEEEecCC-----CCccceEEEEeeecCCcchHHHHHHH---------------HHHhhhHHHH
Confidence            389999999999999999998541     01178999999886532221111111               0011122346


Q ss_pred             HHHHHHHhhhCCCCccccccc--------cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      |+..+..+.+.+|  +..+..        ...+|||||+|  |.....+.. ..++..++..++.||+.+|.+|| .+||
T Consensus        98 e~~~~~~l~h~ni--~~~~~~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~i  172 (345)
T 2v62_A           98 KWIERKQLDYLGI--PLFYGSGLTEFKGRSYRFMVMERLG--IDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH-ENEY  172 (345)
T ss_dssp             HHHHHHTCSCCCC--CCEEEEEEEESSSCEEEEEEEECEE--EEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH-HTTE
T ss_pred             HHHhhccccccCc--ceeecccccccCCCcEEEEEEeccC--CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCe
Confidence            7777887776653  333321        34589999993  544433433 26888999999999999999999 5899


Q ss_pred             cccCCCCCceEEe-CC--eEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH-KA--TLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~-~g--~l~IIDFG~Av~~  214 (351)
                      |||||||.|||+. ++  .++|+|||.|...
T Consensus       173 vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~  203 (345)
T 2v62_A          173 VHGDIKAANLLLGYKNPDQVYLADYGLSYRY  203 (345)
T ss_dssp             ECSCCSGGGEEEESSSTTSEEECCCTTCEES
T ss_pred             eCCCcCHHHEEEccCCCCcEEEEeCCCceec
Confidence            9999999999995 44  8999999999643

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.76  E-value=2.7e-18  Score=161.94  Aligned_cols=144  Identities=19%  Similarity=0.216  Sum_probs=106.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....                       .........+|
T Consensus        36 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~-----------------------~~~~~~~~~~e   84 (309)
T 2h34_A           36 YRLRRLVGRGGMGDVYEAEDTVR--------ERIVALKLMSETLSS-----------------------DPVFRTRMQRE   84 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------TEEEEEEECGGGGGG-----------------------SHHHHHHHHHH
T ss_pred             EEEEEEEcCCCCeeEEEEEEcCC--------CeEEEEEecCccccc-----------------------CHHHHHHHHHH
Confidence            99999999999999999998666        899999998753110                       01112234578


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..+.+|.+.+|  +..+..    ...++||||+. .|.....+.. ..++..++..++.||+.+|.+|| .+||+|+||
T Consensus        85 ~~~l~~l~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dl  160 (309)
T 2h34_A           85 ARTAGRLQEPHV--VPIHDFGEIDGQLYVDMRLIN-GVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH-AAGATHRDV  160 (309)
T ss_dssp             HHHHTTCCCTTB--CCEEEEEEETTEEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHhhcCCCCe--eEEEEEEeeCCeEEEEEEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCcCCcCCC
Confidence            889988876653  223222    44589999994 2333333332 45888999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccCC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+. ++.++|+|||.|....
T Consensus       161 kp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          161 KPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             CGGGEEECTTSCEEECSCCC-----
T ss_pred             ChHHEEEcCCCCEEEecCccCcccc
Confidence            99999995 6899999999986543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.76  E-value=3.4e-18  Score=167.66  Aligned_cols=137  Identities=14%  Similarity=0.115  Sum_probs=101.6

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..         +..+|||.+....              ++.                .+
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~---------~~~~aikk~~~~~--------------~~~----------------~~   81 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVE---------SDEVAIKKVLQDK--------------RFK----------------NR   81 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT---------TEEEEEEEEECCT--------------TSC----------------CH
T ss_pred             eEEEeEEEeeCCCeEEEEEEECC---------CCeEEEEEEecCc--------------chH----------------HH
Confidence            39999999999999999999843         4558888765321              111                14


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-c------ceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-K------SHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~------~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      |+..|+.|.+.+|. +...+.. .      ..+|||||++  |.....+.     ...++...+..++.||+.+|.+|| 
T Consensus        82 E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-  158 (394)
T 4e7w_A           82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-  158 (394)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS--EEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC--ccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            88888888776542 1111111 1      1569999995  43322221     345888889999999999999999 


Q ss_pred             hCCccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      .+|||||||||.|||++  ++.++|+|||.|...
T Consensus       159 ~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            59999999999999996  589999999999653

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.76  E-value=4.4e-18  Score=162.58  Aligned_cols=141  Identities=14%  Similarity=0.097  Sum_probs=92.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.+..+        |+.||||++.....              +..             ....
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~--------------~~~-------------~~~~   68 (360)
T 3e3p_A           24 RFQVERMAGQGTFGTVQLGKEKST--------GMSVAIKKVIQDPR--------------FRN-------------RELQ   68 (360)
T ss_dssp             TEEEC----------CEEEEETTT--------CCEEEEEEEECCTT--------------CCC-------------HHHH
T ss_pred             ceEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEEecCcc--------------ccH-------------HHHH
Confidence            389999999999999999998666        99999998865210              000             0124


Q ss_pred             HHHHHHHhhhCCCC-ccccccc-c-------ceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSEGLN-VPKPILL-K-------SHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLY  181 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~~-~-------~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH  181 (351)
                      ++..|..+.+.+|. +-..+.. .       ..+|||||++  |.....+     ....++...+..++.|++.+|.+||
T Consensus        69 ~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH  146 (360)
T 3e3p_A           69 IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH  146 (360)
T ss_dssp             HHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCS--CBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccc--ccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            56667777665532 1111111 1       1579999995  4322222     2245788888999999999999999


Q ss_pred             --hhCCccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        182 --NKCHLVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       182 --~~~glVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                        . +|||||||||.|||++  ++.++|+|||.|...
T Consensus       147 ~~~-~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~  182 (360)
T 3e3p_A          147 LPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL  182 (360)
T ss_dssp             STT-TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred             CCC-CCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence              6 8999999999999995  589999999999754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.76  E-value=4.9e-18  Score=158.78  Aligned_cols=145  Identities=18%  Similarity=0.229  Sum_probs=107.3

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      ..+|..+..||+|+||.||+|..  +        ++.||||++........                      .......
T Consensus        30 ~~~~~~~~~lg~G~~g~Vy~~~~--~--------~~~vavK~~~~~~~~~~----------------------~~~~~~~   77 (307)
T 2nru_A           30 RPISVGGNKMGEGGFGVVYKGYV--N--------NTTVAVKKLAAMVDITT----------------------EELKQQF   77 (307)
T ss_dssp             SBTTTTCCEEEECSSEEEEEEES--S--------SCEEEEEEECCCTTSCT----------------------TTHHHHH
T ss_pred             ccccccCCccccCCCeEEEEEEE--C--------CceEEEEEEecccCcch----------------------HHHHHHH
Confidence            34567779999999999999986  3        78999999875321000                      0112234


Q ss_pred             HHHHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc----cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        114 EKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK----DTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       114 ekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~----~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      .+|+..|.+|.+.+|  +..+..    ...++||||+. +|.....+.    ...++...+..++.||+.+|.+|| ..|
T Consensus        78 ~~E~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~  153 (307)
T 2nru_A           78 DQEIKVMAKCQHENL--VELLGFSSDGDDLCLVYVYMP-NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH-ENH  153 (307)
T ss_dssp             HHHHHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHHHHhcCCCCe--EEEEEEEecCCceEEEEEecC-CCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh-cCC
Confidence            578999999977653  333322    45689999995 343333332    235888889999999999999999 599


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||+||||.|||++ ++.++|+|||.|...
T Consensus       154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  183 (307)
T 2nru_A          154 HIHRDIKSANILLDEAFTAKISDFGLARAS  183 (307)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eecCCCCHHHEEEcCCCcEEEeeccccccc
Confidence            99999999999995 579999999998654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.76  E-value=4.1e-18  Score=158.28  Aligned_cols=143  Identities=17%  Similarity=0.229  Sum_probs=107.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|.+..+        |+.||||+++.......                   .     .....+|
T Consensus        24 y~i~~~lg~G~~g~V~~~~~~~~--------~~~valK~~~~~~~~~~-------------------~-----~~~~~~e   71 (287)
T 2wei_A           24 YNIVCMLGKGSFGEVLKCKDRIT--------QQEYAVKVINKASAKNK-------------------D-----TSTILRE   71 (287)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEGGGBSSS-------------------C-----HHHHHHH
T ss_pred             ceeeEEEcCCCCEEEEEEEEcCC--------CcEEEEEEecccccchH-------------------H-----HHHHHHH
Confidence            99999999999999999998656        89999999875321000                   0     1123468


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|  +..+..    ...++||||+. .|.....+. ...++..++..++.||+.+|.+|| .+|+||+||
T Consensus        72 ~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl  147 (287)
T 2wei_A           72 VELLKKLDHPNI--MKLFEILEDSSSFYIVGELYT-GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH-KHNIVHRDL  147 (287)
T ss_dssp             HHHHHTCCCTTB--CCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhccCCCc--cEEEEEEeCCCeEEEEEEccC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCC
Confidence            899999876653  223321    44579999995 333333332 346888999999999999999999 599999999


Q ss_pred             CCCceEEeC----CeEEEEEccccccCC
Q psy10135        192 SEYNMLVHK----ATLFIIDVAQSVEHD  215 (351)
Q Consensus       192 kp~NILi~~----g~l~IIDFG~Av~~~  215 (351)
                      ||.|||+..    +.++|+|||.+....
T Consensus       148 ~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A          148 KPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             CGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             ChhhEEEecCCCcccEEEeccCcceeec
Confidence            999999942    369999999987553

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.75  E-value=2.1e-18  Score=174.57  Aligned_cols=139  Identities=16%  Similarity=0.112  Sum_probs=107.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        +..||||+++.....                           .....+|
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~--------~~~vavK~~~~~~~~---------------------------~~~~~~E  266 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKY--------SLTVAVKTLKEDTME---------------------------VEEFLKE  266 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGG--------TEEEEEEECCSSSSC---------------------------HHHHHHH
T ss_pred             ceeeeEecCCCCeEEEEEEEcCC--------CeEEEEEEecCcccc---------------------------hHHHHHH
Confidence            78899999999999999998555        889999998753210                           0113468


Q ss_pred             HHHHHHhhhCCCCcccccc----ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +..|.+|.+.+|  ...+.    ....+|||||+. .|.+...+..   ..++...+..++.||+.+|.+|| ..|||||
T Consensus       267 ~~~l~~l~hpni--v~l~~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivHr  342 (495)
T 1opk_A          267 AAVMKEIKHPNL--VQLLGVCTREPPFYIITEFMT-YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHR  342 (495)
T ss_dssp             HHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH-HTTEECS
T ss_pred             HHHHHhcCCCCE--eeEEEEEecCCcEEEEEEccC-CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH-hCCcccC
Confidence            999999977653  22222    245689999995 4544444432   34788888999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||+|...
T Consensus       343 Dlkp~NIll~~~~~~kl~DFG~a~~~  368 (495)
T 1opk_A          343 NLAARNCLVGENHLVKVADFGLSRLM  368 (495)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEECC
T ss_pred             CCChhhEEECCCCcEEEeecccceec
Confidence            9999999994 689999999999754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=4.3e-18  Score=162.61  Aligned_cols=146  Identities=18%  Similarity=0.146  Sum_probs=103.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|....+    ....+..||||+++.....                         .......+
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~----~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   95 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTS----SGKKEVPVAIKTLKAGYTE-------------------------KQRVDFLG   95 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC-------CCEEEEEEEEECTTCCH-------------------------HHHHHHHH
T ss_pred             HhhcccEEecCCCeEEEEEEEecC----CCCccccEEEEEcCCCCCH-------------------------HHHHHHHH
Confidence            388899999999999999987332    0011346999998753210                         01122457


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |+..|.+|.+.+|  ++.+..    ...+|||||+. .|.....+..  ..++..++..++.||+.+|.+|| ..|||||
T Consensus        96 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~  171 (333)
T 1mqb_A           96 EAGIMGQFSHHNI--IRLEGVISKYKPMMIITEYME-NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-NMNYVHR  171 (333)
T ss_dssp             HHHHHHTCCCTTB--CCEEEEECSSSSEEEEEECCT-TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHHhCCCCCC--CcEEEEEecCCCcEEEEeCCC-CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCC
Confidence            8899999876653  233322    45689999995 3333333332  45888899999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+. ++.++|+|||.|...
T Consensus       172 Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          172 DLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             CCCGGGEEECTTCCEEECCCCC----
T ss_pred             CCChheEEECCCCcEEECCCCcchhh
Confidence            9999999995 689999999999754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.75  E-value=3.9e-18  Score=161.56  Aligned_cols=137  Identities=23%  Similarity=0.206  Sum_probs=103.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+  +        |+.||||+++....                             ....+
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~--~--------~~~vavK~~~~~~~-----------------------------~~~~~   83 (342)
T 1b6c_B           43 TIVLQESIGKGRFGEVWRGKW--R--------GEEVAVKIFSSREE-----------------------------RSWFR   83 (342)
T ss_dssp             HCEEEEEEEEETTEEEEEEEE--T--------TEEEEEEEECGGGH-----------------------------HHHHH
T ss_pred             cEEEEeeecCCCCcEEEEEEE--c--------CccEEEEEeCchhH-----------------------------HHHHH
Confidence            389999999999999999987  3        88999999864210                             01134


Q ss_pred             HHHHHHH--hhhCCCCccccccc---c-----ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---
Q psy10135        116 EMRNLTR--MYSEGLNVPKPILL---K-----SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN---  182 (351)
Q Consensus       116 E~~nL~r--L~~~gi~vP~pi~~---~-----~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~---  182 (351)
                      |...+..  +.+.+|  ...+..   .     ..++||||+. .|.....+....++..++..++.|++.+|.+||.   
T Consensus        84 e~~~~~~~~l~h~ni--~~~~~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  160 (342)
T 1b6c_B           84 EAEIYQTVMLRHENI--LGFIAADNKDNGTWTQLWLVSDYHE-HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV  160 (342)
T ss_dssp             HHHHHHHSCCCCTTB--CCEEEEEECCCSSCCCEEEEECCCT-TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHHHHhhcCCCcE--EEEEeeecccCCccceeEEEEeecC-CCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6666666  444442  222221   1     4689999995 4455555556678889999999999999999992   


Q ss_pred             ----hCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        183 ----KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ----~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                          ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       161 ~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  197 (342)
T 1b6c_B          161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  197 (342)
T ss_dssp             STTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEE
T ss_pred             hhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceec
Confidence                38999999999999995 689999999998643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.75  E-value=2.3e-18  Score=159.27  Aligned_cols=149  Identities=15%  Similarity=0.082  Sum_probs=100.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.....     .+.+..||||+++......                     .  .......+
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~vavK~~~~~~~~~---------------------~--~~~~~~~~   70 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAP-----SGKTVSVAVKCLKPDVLSQ---------------------P--EAMDDFIR   70 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECT-----TSCEEEEEEEC-----------------------------C--HHHHHHHH
T ss_pred             HeeeeeeecCCCceeEEEEEeccC-----CCceeEEEEEEEccCccCC---------------------H--HHHHHHHH
Confidence            499999999999999999985222     0113369999987532100                     0  01122357


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.+|.+.+| .+...+.....++||||+. .|.....+..  ..++...+..++.||+.+|.+|| .+|+||+|||
T Consensus        71 e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dik  148 (291)
T 1u46_A           71 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE-SKRFIHRDLA  148 (291)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT-TCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCC
T ss_pred             HHHHHHhCCCCCcccEEEEEccCCceeeEeccc-CCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH-hCCcccCCCc
Confidence            8999999976653 2222223345789999995 3444333332  35888899999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |.|||+ .++.++|+|||.+...
T Consensus       149 p~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A          149 ARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             GGGEEEEETTEEEECCCTTCEEC
T ss_pred             hheEEEcCCCCEEEccccccccc
Confidence            999999 5789999999998755

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.75  E-value=5.4e-18  Score=161.23  Aligned_cols=158  Identities=15%  Similarity=0.113  Sum_probs=109.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+  +        |+.||||+++...............         .............+|
T Consensus        33 y~~~~~lg~G~~g~V~~~~~--~--------~~~vavK~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~E   93 (348)
T 2pml_X           33 YRIIRTLNQGKFNKIILCEK--D--------NKFYALKKYEKSLLEKKRDFTKSNN---------DKISIKSKYDDFKNE   93 (348)
T ss_dssp             EEEEEEEECCSSCCEEEEEE--T--------TEEEEEEEEEHHHHSSCEEECCCSS---------SSCCEEEHHHHHHHH
T ss_pred             eEEEEEEcCCCCeEEEEEEc--C--------CceEEEEEeecccccchhhhccccc---------hhhhHHhHHHHHHHH
Confidence            89999999999999999998  5        8999999998532211100000000         000000111234578


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccc------cc---cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAK------LK---DTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~------L~---~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      +..|.+|.+.+|. +-..+. ....++||||+. .|.....      +.   ...++...+..++.||+.+|.+||..+|
T Consensus        94 ~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~  172 (348)
T 2pml_X           94 LQIITDIKNEYCLTCEGIITNYDEVYIIYEYME-NDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN  172 (348)
T ss_dssp             HHHHTTCCCTTBCCCSEEEESSSEEEEEEECCT-TCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHhCCCCCcceEEEEEeeCCeEEEEEeccC-CCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            9999999766532 211111 245689999995 2333332      33   2458889999999999999999993389


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +||+||||.|||+. ++.++|+|||.|...
T Consensus       173 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  202 (348)
T 2pml_X          173 ICHRDVKPSNILMDKNGRVKLSDFGESEYM  202 (348)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EeecCCChHhEEEcCCCcEEEecccccccc
Confidence            99999999999994 689999999999754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.75  E-value=6.9e-18  Score=159.15  Aligned_cols=138  Identities=25%  Similarity=0.226  Sum_probs=100.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .         ++.||||+++...                            ......+
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~-~---------~~~vavK~~~~~~----------------------------~~~~~~~   50 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKW-R---------AKDVAIKQIESES----------------------------ERKAFIV   50 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-T---------TEEEEEEECSSTT----------------------------HHHHHHH
T ss_pred             HeeeeeEeecCCCceEEEEEE-C---------CeeEEEEEecChh----------------------------HHHHHHH
Confidence            388999999999999999987 3         7789999986421                            0112346


Q ss_pred             HHHHHHHhhhCCCCcccccc--ccceEEEEcccCcccccccccccC----CCCHHHHHHHHHHHHHHHHHHHhh--CCcc
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL--LKSHVLLMTFIGEDGWPAAKLKDT----PLTESGACKLYRECVVMMWRLYNK--CHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~--~~~~vLVMEfig~~G~~~~~L~~~----~l~~~~~~~l~~qll~~L~~LH~~--~glV  187 (351)
                      |+..|.+|.+.+|.  +.+.  ....+|||||+. +|.....+...    .++...+..++.|++.+|.+||..  .|||
T Consensus        51 E~~~l~~l~hp~iv--~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~iv  127 (307)
T 2eva_A           51 ELRQLSRVNHPNIV--KLYGACLNPVCLVMEYAE-GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI  127 (307)
T ss_dssp             HHHHHHHCCCTTBC--CEEEBCTTTTEEEEECCT-TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCC
T ss_pred             HHHHHhcCCCCCcC--eEEEEEcCCcEEEEEcCC-CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCee
Confidence            88999999776532  2222  245689999995 34433333322    267778889999999999999932  6899


Q ss_pred             ccCCCCCceEEeC-Ce-EEEEEccccccC
Q psy10135        188 HADLSEYNMLVHK-AT-LFIIDVAQSVEH  214 (351)
Q Consensus       188 H~DLkp~NILi~~-g~-l~IIDFG~Av~~  214 (351)
                      ||||||.|||+.. +. ++|+|||.|...
T Consensus       128 H~dlkp~NIll~~~~~~~kl~Dfg~~~~~  156 (307)
T 2eva_A          128 HRDLKPPNLLLVAGGTVLKICDFGTACDI  156 (307)
T ss_dssp             CCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred             cCCCChhHEEEeCCCCEEEEccccccccc
Confidence            9999999999954 54 899999998654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.74  E-value=8.7e-18  Score=161.22  Aligned_cols=153  Identities=14%  Similarity=0.175  Sum_probs=99.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||+|+||.||+|.+..+........++.||||+++...              ++.         ..+......
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~--------------~~~---------~E~~~l~~l   99 (352)
T 2jii_A           43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG--------------RLF---------NEQNFFQRA   99 (352)
T ss_dssp             EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTS--------------THH---------HHHHHHHHH
T ss_pred             eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccc--------------hHH---------HHHHHHHHh
Confidence            489999999999999999998441000000017899999987531              010         011111111


Q ss_pred             HHHHHHH----hhhCC-CCccccccc-----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTR----MYSEG-LNVPKPILL-----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~r----L~~~g-i~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      .+.|+.+    +.... ..+|..+..     ...+|||||+|  |.+...+..   ..++..++..++.||+.+|.+|| 
T Consensus       100 ~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-  176 (352)
T 2jii_A          100 AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLG--RSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH-  176 (352)
T ss_dssp             CCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCC--EEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             cccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCC--cCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            1222222    22211 234444432     34589999994  544444433   46899999999999999999999 


Q ss_pred             hCCccccCCCCCceEEeC-C--eEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVHK-A--TLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~~-g--~l~IIDFG~Av~~  214 (351)
                      ..|||||||||.|||+.. +  .++|+|||.|...
T Consensus       177 ~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~  211 (352)
T 2jii_A          177 ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRY  211 (352)
T ss_dssp             HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCS
T ss_pred             hCCccCCCCCHHHEEEcCCCCceEEEecCcceeec
Confidence            589999999999999965 4  7999999999643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.74  E-value=3.7e-18  Score=161.70  Aligned_cols=140  Identities=19%  Similarity=0.134  Sum_probs=102.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEE--EEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEF--AIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~v--AIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |++.+.||+|+||.||+|.+..+        |..+  |||+++.....  .                       ......
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~~~v~iK~~~~~~~~--~-----------------------~~~~~~   73 (327)
T 1fvr_A           27 IKFQDVIGEGNFGQVLKARIKKD--------GLRMDAAIKRMKEYASK--D-----------------------DHRDFA   73 (327)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEET--------TEEEEEEEEEEECC-------------------------------CHHH
T ss_pred             ccceeeeecCCCceEEEEEEccC--------Ccccceeeeeeccccch--H-----------------------HHHHHH
Confidence            88999999999999999988555        6654  99988742100  0                       001134


Q ss_pred             HHHHHHHHh-hhCCCCccccccc----cceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHH
Q psy10135        115 KEMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRE  172 (351)
Q Consensus       115 kE~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~q  172 (351)
                      +|+..|.+| .+.+|  ++.+..    ...+|||||+. .|.....+..                 ..++..++..++.|
T Consensus        74 ~E~~~l~~l~~hp~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  150 (327)
T 1fvr_A           74 GELEVLCKLGHHPNI--INLLGACEHRGYLYLAIEYAP-HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD  150 (327)
T ss_dssp             HHHHHHTTCCCCTTB--CCEEEEEEETTEEEEEECCCT-TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCch--hhhceeeeeCCceEEEEecCC-CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHH
Confidence            688889888 55543  233322    44679999995 3333333322                 25788899999999


Q ss_pred             HHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        173 CVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       173 ll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      |+.+|.+|| ..|||||||||.|||+. ++.++|+|||.|..
T Consensus       151 i~~aL~~LH-~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~  191 (327)
T 1fvr_A          151 VARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSRG  191 (327)
T ss_dssp             HHHHHHHHH-HTTEECSCCSGGGEEECGGGCEEECCTTCEES
T ss_pred             HHHHHHHHH-hCCccCCCCccceEEEcCCCeEEEcccCcCcc
Confidence            999999999 59999999999999995 57999999999863

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.74  E-value=1.3e-17  Score=159.69  Aligned_cols=136  Identities=16%  Similarity=0.212  Sum_probs=97.4

Q ss_pred             eeec-ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVN-GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~-~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |.+. +.||.|+||.||+|.+..+        |+.||||+++....                               ...
T Consensus        30 y~i~~~~lG~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~-------------------------------~~~   70 (336)
T 3fhr_A           30 YQLSKQVLGLGVNGKVLECFHRRT--------GQKCALKLLYDSPK-------------------------------ARQ   70 (336)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEESSHH-------------------------------HHH
T ss_pred             eEecceeeeeCCCeEEEEEEECCC--------CCEEEEEEecCcHH-------------------------------HHH
Confidence            7875 5799999999999999667        99999999865311                               011


Q ss_pred             HHHHH-HHhhhCCCCccccccc--------cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNL-TRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL-~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+..+ ..+.+.+  ++..+..        ...+|||||+. +|.....+..   ..++..++..++.||+.+|.+|| .
T Consensus        71 e~~~~~~~~~h~~--i~~~~~~~~~~~~~~~~~~lv~e~~~-gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH-~  146 (336)
T 3fhr_A           71 EVDHHWQASGGPH--IVCILDVYENMHHGKRCLLIIMECME-GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-S  146 (336)
T ss_dssp             HHHHHHHHTTSTT--BCCEEEEEEEEETTEEEEEEEEECCT-TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHhcCCCC--hHHHHHHHhhccCCCceEEEEEeccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-h
Confidence            22222 2333333  2222221        12579999995 3444444433   25888999999999999999999 5


Q ss_pred             CCccccCCCCCceEEe----CCeEEEEEccccccCC
Q psy10135        184 CHLVHADLSEYNMLVH----KATLFIIDVAQSVEHD  215 (351)
Q Consensus       184 ~glVH~DLkp~NILi~----~g~l~IIDFG~Av~~~  215 (351)
                      .|||||||||.|||+.    ++.++|+|||.|....
T Consensus       147 ~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~  182 (336)
T 3fhr_A          147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT  182 (336)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred             CCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence            8999999999999995    3459999999997543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.74  E-value=8.7e-18  Score=157.65  Aligned_cols=146  Identities=14%  Similarity=0.158  Sum_probs=104.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....-...   ...                 .....+|
T Consensus        33 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vavK~~~~~~~~~~~~---~~~-----------------~~~~~~e   84 (312)
T 2iwi_A           33 YRLGPLLGKGGFGTVFAGHRLTD--------RLQVAIKVIPRNRVLGWSP---LSD-----------------SVTCPLE   84 (312)
T ss_dssp             CEEEEEEEEETTEEEEEEECTTT--------CCEEEEEECCSTTTC----------------------------CCCCHH
T ss_pred             eEEeeEEEcCCCEEEEEEEEccC--------CeEEEEEEEeccccccccc---chh-----------------hHHHHHH
Confidence            89999999999999999998666        8999999997542110000   000                 0011358


Q ss_pred             HHHHHHhh----hCCCCcccccc----ccceEEEEcc-cCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        117 MRNLTRMY----SEGLNVPKPIL----LKSHVLLMTF-IGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       117 ~~nL~rL~----~~gi~vP~pi~----~~~~vLVMEf-ig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      +..+.++.    +.+  ++..+.    ....++|||+ +. +|.....+. ...++...+..++.||+.+|.+|| ..|+
T Consensus        85 ~~~l~~l~~~~~h~~--i~~~~~~~~~~~~~~~v~e~~~~-~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i  160 (312)
T 2iwi_A           85 VALLWKVGAGGGHPG--VIRLLDWFETQEGFMLVLERPLP-AQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH-SRGV  160 (312)
T ss_dssp             HHHHHHHHSSCCCSS--BCCEEEEC-----CEEEEECCSS-EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HHTE
T ss_pred             HHHHHhhcccCCCCC--eeeEEEEEecCCeEEEEEEecCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCe
Confidence            88888883    333  222222    2445899999 53 343333333 245888999999999999999999 5899


Q ss_pred             cccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        187 VHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       187 VH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      ||+||||.|||+.  ++.++|+|||.|...
T Consensus       161 ~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~  190 (312)
T 2iwi_A          161 VHRDIKDENILIDLRRGCAKLIDFGSGALL  190 (312)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCSSCEEC
T ss_pred             eecCCChhhEEEeCCCCeEEEEEcchhhhc
Confidence            9999999999996  589999999998754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.74  E-value=2.1e-18  Score=161.88  Aligned_cols=140  Identities=17%  Similarity=0.165  Sum_probs=98.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+ .          ..+|||+++.........       .+|.                 +|
T Consensus        35 ~~~~~~lg~G~~g~V~~~~~-~----------~~~avk~~~~~~~~~~~~-------~~~~-----------------~e   79 (319)
T 2y4i_B           35 LEIGELIGKGRFGQVYHGRW-H----------GEVAIRLIDIERDNEDQL-------KAFK-----------------RE   79 (319)
T ss_dssp             EECCCBCCCSSSSEEEEEEE-S----------SSEEEEECCCCSCCCCCC-------CCCC-----------------TT
T ss_pred             eEEeeEeccCCceEEEEEEE-c----------CeEEEEEeecCCCCHHHH-------HHHH-----------------HH
Confidence            89999999999999999987 2          359999987642111110       1121                 35


Q ss_pred             HHHHHHhhhCCCC-cccccc-ccceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.+|. +-..+. ....++||||+. .|.....+...  .++..++..++.||+.+|.+|| ..|+||+|||
T Consensus        80 ~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~i~H~dlk  157 (319)
T 2y4i_B           80 VMAYRQTRHENVVLFMGACMSPPHLAIITSLCK-GRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH-AKGILHKDLK  157 (319)
T ss_dssp             GGGGTTCCCTTBCCCCEEEECSSCEEEECBCCC-SEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH-HTTCCCCCCC
T ss_pred             HHHHhcCCCCCEeEEEEEEecCCceEEEeeccc-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCC
Confidence            5666666655432 111111 144689999994 23333334332  4788899999999999999999 5999999999


Q ss_pred             CCceEEeCCeEEEEEcccccc
Q psy10135        193 EYNMLVHKATLFIIDVAQSVE  213 (351)
Q Consensus       193 p~NILi~~g~l~IIDFG~Av~  213 (351)
                      |.|||++++.++|+|||.|..
T Consensus       158 p~NIl~~~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          158 SKNVFYDNGKVVITDFGLFSI  178 (319)
T ss_dssp             STTEEEC--CCEECCCSCCC-
T ss_pred             hhhEEEeCCCEEEeecCCccc
Confidence            999999999999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.74  E-value=4.7e-18  Score=177.55  Aligned_cols=141  Identities=18%  Similarity=0.121  Sum_probs=104.5

Q ss_pred             cceeeecCceEEEEEEeC--CCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPG--ANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~--~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      .+.||+|+||.||+|...  ..        ++.||||+++......                        .......+|+
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~--------~~~vAvK~~~~~~~~~------------------------~~~~~~~~E~  421 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKV--------VKTVAVKILKNEANDP------------------------ALKDELLAEA  421 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSC--------EEEEEEEEECGGGGCG------------------------GGHHHHHHHH
T ss_pred             CCEeccCCCEEEEEEEEcCCCc--------ceEEEEEEeccccCCH------------------------HHHHHHHHHH
Confidence            358999999999999652  23        6889999997532100                        0111235789


Q ss_pred             HHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        118 RNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       118 ~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      ..|.+|.+.+| .+-..+.....+|||||+. .|.....+.. ..++..++..++.||+.+|.+|| ..|||||||||.|
T Consensus       422 ~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH-~~~iiHrDLkp~N  499 (635)
T 4fl3_A          422 NVMQQLDNPYIVRMIGICEAESWMLVMEMAE-LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARN  499 (635)
T ss_dssp             HHHHHCCCTTBCCEEEEEESSSEEEEEECCT-TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGG
T ss_pred             HHHHhCCCCCEeeEEEEEecCCEEEEEEccC-CCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH-HCCEeCCCCChHh
Confidence            99999977653 2222223355689999995 4444444433 35888899999999999999999 5999999999999


Q ss_pred             eEE-eCCeEEEEEccccccC
Q psy10135        196 MLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       196 ILi-~~g~l~IIDFG~Av~~  214 (351)
                      ||+ .++.++|+|||+|...
T Consensus       500 ILl~~~~~~kL~DFGla~~~  519 (635)
T 4fl3_A          500 VLLVTQHYAKISDFGLSKAL  519 (635)
T ss_dssp             EEEEETTEEEECCTTHHHHT
T ss_pred             EEEeCCCCEEEEEcCCcccc
Confidence            999 5689999999999754

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.74  E-value=1.1e-17  Score=158.12  Aligned_cols=141  Identities=13%  Similarity=0.091  Sum_probs=99.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+..+        |+.||||+++.....                       ..  ......|
T Consensus        24 y~~~~~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~-----------------------~~--~~~~~~e   70 (327)
T 3aln_A           24 LKDLGEIGRGAYGSVNKMVHKPS--------GQIMAVKRIRSTVDE-----------------------KE--QKQLLMD   70 (327)
T ss_dssp             EEC-CEEEECSSEEEEEEEETTT--------TEEEEEEEEECCCCH-----------------------HH--HHHHHHH
T ss_pred             hhehheeccCCCEEEEEEEEcCC--------CCEEEEEEeecccCc-----------------------hH--HHHHHHH
Confidence            88999999999999999999666        999999999753210                       00  0111233


Q ss_pred             HH-HHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc------cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        117 MR-NLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       117 ~~-nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~------~~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      .. .+..+.+.+|  +..+.    ....+|||||++  |.....+.      ...++...+..++.|++.+|.+||+..|
T Consensus        71 ~~~~~~~~~h~ni--v~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  146 (327)
T 3aln_A           71 LDVVMRSSDCPYI--VQFYGALFREGDCWICMELMS--TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK  146 (327)
T ss_dssp             HHHHHSSCCCTTB--CCEEEEEECSSEEEEEECCCS--EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCCCCcE--eeeeeEEEeCCceEEEEeecC--CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC
Confidence            33 3333443332  22222    144579999995  43222222      3468888899999999999999996339


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||+||||.|||+. ++.++|+|||.|...
T Consensus       147 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          147 IIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99999999999995 689999999999654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.74  E-value=5.7e-18  Score=169.04  Aligned_cols=138  Identities=18%  Similarity=0.161  Sum_probs=105.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.. .         |+.||||+++...    .                        .....+|
T Consensus       195 ~~~~~~lG~G~fg~V~~~~~-~---------~~~vavK~~~~~~----~------------------------~~~~~~E  236 (450)
T 1k9a_A          195 LKLLQTIGKGEFGDVMLGDY-R---------GNKVAVKCIKNDA----T------------------------AQAFLAE  236 (450)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-T---------TEEEEEEEESSCT----T------------------------SHHHHHH
T ss_pred             eEEEeeecCcCCeeEEEEEe-c---------CCeEEEEEeCCch----H------------------------HHHHHHH
Confidence            88999999999999999987 3         7899999987531    0                        0012468


Q ss_pred             HHHHHHhhhCCCC-ccccccc--cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLN-VPKPILL--KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~~--~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|. +...+..  ...+|||||+. .|.....+..   ..++...+..++.||+.+|.+|| ..|+||||
T Consensus       237 ~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrD  314 (450)
T 1k9a_A          237 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA-KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRD  314 (450)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT-TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC-CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCC
Confidence            8999999776532 1111111  24689999995 4444444432   23688889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||+|...
T Consensus       315 lkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          315 LAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCHhhEEECCCCCEEEeeCCCcccc
Confidence            999999995 689999999999754

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.74  E-value=3.7e-18  Score=157.66  Aligned_cols=139  Identities=18%  Similarity=0.156  Sum_probs=100.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|++|.||+|..  .        |+.||||+++....                            .....+|
T Consensus        23 y~~~~~lg~G~~g~V~~~~~--~--------~~~vavK~~~~~~~----------------------------~~~~~~E   64 (278)
T 1byg_A           23 LKLLQTIGKGEFGDVMLGDY--R--------GNKVAVKCIKNDAT----------------------------AQAFLAE   64 (278)
T ss_dssp             EEEEEEEEECSSCEEEEEEE--T--------TEEEEEEECCCCC------------------------------HHHHHT
T ss_pred             ceEEeEEecCCCceEEEEEE--c--------CCEEEEEEecchhH----------------------------HHHHHHH
Confidence            89999999999999999987  3        78999999875210                            0112458


Q ss_pred             HHHHHHhhhCCCC-cccccc-c-cceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLN-VPKPIL-L-KSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi~-~-~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.++. +...+. . ...++||||+. .|.....+...   .++...+..++.|++.+|.+|| ..|++|+|
T Consensus        65 ~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~d  142 (278)
T 1byg_A           65 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA-KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRD  142 (278)
T ss_dssp             HHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT-TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HTTCCCSC
T ss_pred             HHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH-hCCccccC
Confidence            8888888766532 111111 1 34689999995 33333333321   2778888999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||.|||+. ++.++|+|||.+....
T Consensus       143 lkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A          143 LAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCcceEEEeCCCcEEEeecccccccc
Confidence            999999995 6899999999986543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.73  E-value=7.5e-18  Score=159.62  Aligned_cols=146  Identities=15%  Similarity=0.116  Sum_probs=100.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.+.||.|+||.||+|.....   .....+..||||+++.....                         .......+
T Consensus        31 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~   82 (327)
T 2yfx_A           31 NITLIRGLGHGAFGEVYEGQVSGM---PNDPSPLQVAVKTLPEVCSE-------------------------QDELDFLM   82 (327)
T ss_dssp             GCEEEEECC--CSSCEEEEEC-----------CCEEEEEECCSSCCH-------------------------HHHHHHHH
T ss_pred             heEEEEEEcCCCCeeEEEEEEcCC---CCCCccceEEEEEeccccch-------------------------hhHHHHHH
Confidence            389999999999999999984110   00112789999998642100                         01112346


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc--------CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD--------TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~--------~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+..|.+|.+.+|  +..+..    ...+|||||+. +|.....+..        ..++..++..++.||+.+|.+|| .
T Consensus        83 E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH-~  158 (327)
T 2yfx_A           83 EALIISKFNHQNI--VRCIGVSLQSLPRFILMELMA-GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-E  158 (327)
T ss_dssp             HHHHHHHCCCTTB--CCEEEEECSSSSCEEEEECCT-TEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHhhCCCCCC--CeEEEEEcCCCCcEEEEecCC-CCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh-h
Confidence            8899999876653  223322    34589999994 2333332322        23778889999999999999999 5


Q ss_pred             CCccccCCCCCceEEe----CCeEEEEEcccccc
Q psy10135        184 CHLVHADLSEYNMLVH----KATLFIIDVAQSVE  213 (351)
Q Consensus       184 ~glVH~DLkp~NILi~----~g~l~IIDFG~Av~  213 (351)
                      .|||||||||.|||+.    +..++|+|||.|..
T Consensus       159 ~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~  192 (327)
T 2yfx_A          159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD  192 (327)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred             CCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence            9999999999999996    23699999999863

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.73  E-value=1.6e-18  Score=160.94  Aligned_cols=142  Identities=20%  Similarity=0.160  Sum_probs=94.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|++|.||+|.+..+        |+.||||+++.....  .   .                    .....+
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~--~---~--------------------~~~~~~   62 (303)
T 2vwi_A           16 DYELQEVIGSGATAVVQAAYCAPK--------KEKVAIKRINLEKCQ--T---S--------------------MDELLK   62 (303)
T ss_dssp             CCEEEEECC---CCCEEEEEC------------CEEEEECCC--------------------------------------
T ss_pred             hhhhhheeccccceEEEEEEECCC--------CcEEEEEEEEhhhcc--h---h--------------------HHHHHH
Confidence            489999999999999999998556        899999998653110  0   0                    001235


Q ss_pred             HHHHHHHhhhCCCCcccccc----ccceEEEEcccCcccccccccc---------cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTRMYSEGLNVPKPIL----LKSHVLLMTFIGEDGWPAAKLK---------DTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~----~~~~vLVMEfig~~G~~~~~L~---------~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      |+..|.++.+.+|  +..+.    ....++||||+. +|.....+.         ...++...+..++.||+.+|.+|| 
T Consensus        63 e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-  138 (303)
T 2vwi_A           63 EIQAMSQCHHPNI--VSYYTSFVVKDELWLVMKLLS-GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH-  138 (303)
T ss_dssp             ---CCCCCCCTTB--CCEEEEEESSSCEEEEEECCT-TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHhhcCCCCE--eeEEEEEeecCCcEEEehhcc-CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            6777777765553  22222    245689999995 333322222         234788899999999999999999 


Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ..|++|+||||.|||+. ++.++|+|||.|...
T Consensus       139 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A          139 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             hCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            59999999999999995 689999999998654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.73  E-value=1.7e-17  Score=153.67  Aligned_cols=138  Identities=17%  Similarity=0.112  Sum_probs=100.6

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      +||+|+||.||+|.+..+        ++.||||+++....      .                    ......+|+..+.
T Consensus        29 ~lg~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~------~--------------------~~~~~~~e~~~l~   74 (295)
T 2clq_A           29 VLGKGTYGIVYAGRDLSN--------QVRIAIKEIPERDS------R--------------------YSQPLHEEIALHK   74 (295)
T ss_dssp             EEEECSSSEEEEEEETTT--------CCEEEEEEEECCCC-----------------------------HHHHHHHHHHH
T ss_pred             EEeecCcEEEEEEEECCC--------CeEEEEEEccCCch------H--------------------HHHHHHHHHHHHH
Confidence            999999999999998666        89999999875311      0                    0112346888898


Q ss_pred             HhhhCCCC-cccccc-ccceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        122 RMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       122 rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      .+.+.+|. +...+. ....++||||+. +|.....+..    ..++...+..++.||+.+|.+|| ..|+||+||||.|
T Consensus        75 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~N  152 (295)
T 2clq_A           75 HLKHKNIVQYLGSFSENGFIKIFMEQVP-GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH-DNQIVHRDIKGDN  152 (295)
T ss_dssp             TCCCTTBCCEEEEEEETTEEEEEEECCS-EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGG
T ss_pred             hCCCCCEeeEeeEEEeCCcEEEEEEeCC-CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH-hCCEEccCCChhh
Confidence            88766532 111121 134579999994 2333222322    23567778889999999999999 5999999999999


Q ss_pred             eEEe--CCeEEEEEccccccCC
Q psy10135        196 MLVH--KATLFIIDVAQSVEHD  215 (351)
Q Consensus       196 ILi~--~g~l~IIDFG~Av~~~  215 (351)
                      ||+.  ++.++|+|||.|....
T Consensus       153 il~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A          153 VLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             EEEETTTCCEEECCTTTCEESC
T ss_pred             EEEECCCCCEEEeecccccccC
Confidence            9995  6899999999997543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.73  E-value=6.7e-18  Score=154.00  Aligned_cols=140  Identities=11%  Similarity=0.051  Sum_probs=103.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|.+ .         |..||||+++.......                        ......+|
T Consensus        12 y~~~~~lg~G~~g~V~~~~~-~---------~~~~avK~~~~~~~~~~------------------------~~~~~~~E   57 (271)
T 3kmu_A           12 LNFLTKLNENHSGELWKGRW-Q---------GNDIVVKVLKVRDWSTR------------------------KSRDFNEE   57 (271)
T ss_dssp             CEEEEEEEEETTEEEEEEEE-T---------TEEEEEEEECCTTCCHH------------------------HHHHHHHH
T ss_pred             hHHHHHhcCCCcceEEEEEE-C---------CeeEEEEEecccccCHH------------------------HHHHHHHH
Confidence            89999999999999999998 3         78999999976321110                        11123567


Q ss_pred             HHHHHHhhhCCCCccccccc------cceEEEEcccCcccccccccccC---CCCHHHHHHHHHHHHHHHHHHHhhCC--
Q psy10135        117 MRNLTRMYSEGLNVPKPILL------KSHVLLMTFIGEDGWPAAKLKDT---PLTESGACKLYRECVVMMWRLYNKCH--  185 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~------~~~vLVMEfig~~G~~~~~L~~~---~l~~~~~~~l~~qll~~L~~LH~~~g--  185 (351)
                      +..|.++.+.+|  .+.+..      ...++||||+. .|.....+...   .++..++..++.||+.+|.+|| .+|  
T Consensus        58 ~~~l~~l~h~~i--v~~~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~~  133 (271)
T 3kmu_A           58 CPRLRIFSHPNV--LPVLGACQSPPAPHPTLITHWMP-YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPL  133 (271)
T ss_dssp             GGGGCCCSCTTE--ECEEEEECTTTSSSCEEEEECCT-TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT-TSSSC
T ss_pred             HHHHHhcCCCch--hheEEEEccCCCCCeEeeecccC-CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence            888887766553  222221      34589999995 34444444432   3788999999999999999999 589  


Q ss_pred             ccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ++|+||||.|||++ ++.++|+|||.+...
T Consensus       134 i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A          134 IPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             CTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             eecCCCccceEEEcCCcceeEEeccceeee
Confidence            99999999999996 578889888876543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.72  E-value=1.3e-17  Score=173.42  Aligned_cols=142  Identities=17%  Similarity=0.129  Sum_probs=103.7

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...||+|+||.||+|.....      ..+..||||+++.....                         .......+|+.+
T Consensus       341 ~~~LG~G~fG~Vy~~~~~~~------~~~~~vAvK~~~~~~~~-------------------------~~~~~~~~E~~i  389 (613)
T 2ozo_A          341 DIELGCGNFGSVRQGVYRMR------KKQIDVAIKVLKQGTEK-------------------------ADTEEMMREAQI  389 (613)
T ss_dssp             EEEEEECSSSEEEEEEEECS------SCEEEEEEEECCCCCSS-------------------------TTHHHHHHHHHH
T ss_pred             CcEEecCCCcEEEEEEEecC------CCcEEEEEEEcCCCCCh-------------------------HHHHHHHHHHHH
Confidence            34899999999999976321      01668999998753100                         001123468999


Q ss_pred             HHHhhhCCC-CccccccccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCce
Q psy10135        120 LTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNM  196 (351)
Q Consensus       120 L~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NI  196 (351)
                      |.+|.+.+| .+-..+.....+|||||+. .|.....+.  ...++..++..++.||+.+|.+|| ..|||||||||.||
T Consensus       390 l~~l~hpniv~l~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~iiHrDlkp~NI  467 (613)
T 2ozo_A          390 MHQLDNPYIVRLIGVCQAEALMLVMEMAG-GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRNLAARNV  467 (613)
T ss_dssp             HTTCCCTTBCCEEEEEESSSEEEEEECCT-TCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGE
T ss_pred             HHhCCCCCEeeEEEEeccCCeEEEEEeCC-CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HCCEEcCcCCHHHE
Confidence            998876653 2222222355689999996 444433343  235888999999999999999999 59999999999999


Q ss_pred             EEe-CCeEEEEEccccccC
Q psy10135        197 LVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       197 Li~-~g~l~IIDFG~Av~~  214 (351)
                      |+. ++.++|+|||+|...
T Consensus       468 Ll~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          468 LLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             EEEETTEEEECCCSTTTTC
T ss_pred             EEcCCCcEEEeeccCcccc
Confidence            994 689999999999764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.72  E-value=1.8e-17  Score=170.12  Aligned_cols=140  Identities=19%  Similarity=0.230  Sum_probs=98.8

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      .+.||+|+||.||+|..  .        +..+|+|...........                  ...........+|+.+
T Consensus       341 ~~~LG~G~fg~Vy~~~~--~--------~~~~~~k~~~~~~~~~~~------------------~~~~~~~~~~~~E~~i  392 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY--L--------DFDVIIKERVKKGYRDER------------------LDENIRKSRTAREARY  392 (540)
T ss_dssp             -------CCEEEEEEEC--S--------SCEEEEEEECCCTTSCHH------------------HHHHHHHHHHHHHHHH
T ss_pred             CCEEeeCCCEEEEEEEE--C--------CCeEEEEEEecccccchh------------------hhhHHHHHHHHHHHHH
Confidence            46899999999999954  4        789999987542110000                  0011223345789999


Q ss_pred             HHHhhhCCCCccccccc--cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceE
Q psy10135        120 LTRMYSEGLNVPKPILL--KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNML  197 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~~--~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NIL  197 (351)
                      |.+|.+.+|..|..+..  ...+|||||+. +|.....+..       +..++.|++.+|.+|| ++|||||||||.|||
T Consensus       393 l~~l~h~nIv~~~~~~~~~~~~~lVmE~~~-ggsL~~~l~~-------~~~i~~qi~~aL~~LH-~~gIiHrDiKp~NIL  463 (540)
T 3en9_A          393 LALVKDFGIPAPYIFDVDLDNKRIMMSYIN-GKLAKDVIED-------NLDIAYKIGEIVGKLH-KNDVIHNDLTTSNFI  463 (540)
T ss_dssp             HHHGGGGTCCCCCEEEEETTTTEEEEECCC-SEEHHHHSTT-------CTHHHHHHHHHHHHHH-HTTEECTTCCTTSEE
T ss_pred             HHhcCCCCcCceEEEEEeCCccEEEEECCC-CCCHHHHHHH-------HHHHHHHHHHHHHHHH-HCcCccCCCCHHHEE
Confidence            99999888776666544  45699999994 2333333332       4589999999999999 599999999999999


Q ss_pred             EeCCeEEEEEccccccCCCC
Q psy10135        198 VHKATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       198 i~~g~l~IIDFG~Av~~~~p  217 (351)
                      ++. .++|+|||+|.....+
T Consensus       464 l~~-~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          464 FDK-DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             ESS-SEEECCCTTCEECCCH
T ss_pred             ECC-eEEEEECccCEECCCc
Confidence            988 9999999999887654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.72  E-value=6.2e-18  Score=174.70  Aligned_cols=98  Identities=18%  Similarity=0.201  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHhhhCCCCccccccc----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCc
Q psy10135        112 WAEKEMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHL  186 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~gl  186 (351)
                      ...+|+.+|.++... ..+|+.+..    ...|||||||. +|.+...+.. .+++.   ..++.||+.+|.++| ++||
T Consensus       287 ~~~~E~~~l~~~~~~-~~i~~~~~~~ed~~~~yLVMEyv~-G~~L~d~i~~~~~l~~---~~I~~QIl~AL~ylH-~~GI  360 (569)
T 4azs_A          287 ELHNEIKFLTQPPAG-FDAPAVLAHGENAQSGWLVMEKLP-GRLLSDMLAAGEEIDR---EKILGSLLRSLAALE-KQGF  360 (569)
T ss_dssp             HHHHHHHHHHSCCTT-CCCCCEEEEEECSSEEEEEEECCC-SEEHHHHHHTTCCCCH---HHHHHHHHHHHHHHH-HTTC
T ss_pred             HHHHHHHHHHhcCCC-CCeeEEEEEEEECCEEEEEEecCC-CCcHHHHHHhCCCCCH---HHHHHHHHHHHHHHH-HCCc
Confidence            356799999998532 457777754    45689999994 3333344443 34554   468999999999999 5999


Q ss_pred             cccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        187 VHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       187 VH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |||||||+|||+. +|.+||+|||.|....
T Consensus       361 IHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          361 WHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             EESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             eeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            9999999999994 6899999999997664

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=1.2e-17  Score=163.04  Aligned_cols=148  Identities=16%  Similarity=0.073  Sum_probs=100.6

Q ss_pred             ceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         35 MVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        35 ~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      ..|.+.+.||+|+||.||+|....+     .+.+..||||+++....                       .  .......
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~-----~~~~~~vavK~~~~~~~-----------------------~--~~~~~~~  138 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDN-----DGKKIHCAVKSLNRITD-----------------------I--GEVSQFL  138 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEET-----TTEEEEEEEEECCSCSC-----------------------S--HHHHHHH
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECC-----CCcEEEEEEEEcCCCCC-----------------------H--HHHHHHH
Confidence            4588999999999999999986322     01134689998864210                       0  0011234


Q ss_pred             HHHHHHHHhhhCCCC-ccccc-c-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        115 KEMRNLTRMYSEGLN-VPKPI-L-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       115 kE~~nL~rL~~~gi~-vP~pi-~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +|+..|.+|.+.+|. +-... . ....++||||+. .|.....+..  ..++..++..++.||+.+|.+|| ..|||||
T Consensus       139 ~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHr  216 (373)
T 3c1x_A          139 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK-HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-SKKFVHR  216 (373)
T ss_dssp             HHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCT-TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH-HTTCCCS
T ss_pred             HHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCC-CCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH-HCCEecC
Confidence            688888888766532 22111 1 134589999995 3444444433  34777888999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||++ ++.++|+|||.|...
T Consensus       217 Dlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          217 DLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             CCCGGGEEECTTCCEEECCC------
T ss_pred             ccchheEEECCCCCEEEeeccccccc
Confidence            9999999995 579999999999744

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.71  E-value=8.6e-18  Score=165.99  Aligned_cols=144  Identities=12%  Similarity=0.108  Sum_probs=93.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.++||+|+||.||+|.+..+        |+.||||+++.........   +                    ....+|
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~--------g~~vAvK~~~~~~~~~~~~---~--------------------~~~~~E  128 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQET--------GESFEVHVPYFTERPPSNA---I--------------------KQMKEE  128 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEECCSCC----C---C--------------------HHHHHH
T ss_pred             EEEecccccCCCEEEEEEEecCC--------CCceEEEEEecCCCccHHH---H--------------------HHHHHH
Confidence            67889999999999999998667        9999999988432110000   0                    001233


Q ss_pred             HHHHHHhhhC----------CCCc----------cccc---------cccceEEEEcccCcccccccccc--------cC
Q psy10135        117 MRNLTRMYSE----------GLNV----------PKPI---------LLKSHVLLMTFIGEDGWPAAKLK--------DT  159 (351)
Q Consensus       117 ~~nL~rL~~~----------gi~v----------P~pi---------~~~~~vLVMEfig~~G~~~~~L~--------~~  159 (351)
                      +..+..|.+.          ++.+          |..+         .....+++|++.+  |.....+.        ..
T Consensus       129 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~~ll~~l~~~~~~~~  206 (413)
T 3dzo_A          129 VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ--SNLQTFGEVLLSHSSTHK  206 (413)
T ss_dssp             HHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECCS--EEHHHHHHHHHHHTTTSH
T ss_pred             HHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehhc--CCHHHHHHHhhcccccCC
Confidence            3333333220          1101          0000         0123468888874  43322221        12


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        160 PLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       160 ~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      .++......++.||+.+|.+|| ..|||||||||.|||+. ++.++|+|||.|...
T Consensus       207 ~l~~~~~~~i~~qi~~aL~~LH-~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~  261 (413)
T 3dzo_A          207 SLVHHARLQLTLQVIRLLASLH-HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD  261 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH-hCCcccCCcccceEEEecCCeEEEEeccceeec
Confidence            2555667788899999999999 59999999999999995 678999999998654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.71  E-value=5e-17  Score=170.38  Aligned_cols=147  Identities=18%  Similarity=0.105  Sum_probs=108.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||+|+||.||+|.+..+     ...+..||||+++....                         ........+|
T Consensus       392 y~i~~~LG~G~fG~Vy~a~~~~~-----~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~~E  441 (656)
T 2j0j_A          392 IELGRCIGEGQFGDVHQGIYMSP-----ENPAMAVAIKTCKNCTS-------------------------DSVREKFLQE  441 (656)
T ss_dssp             EEEEEEEECCSSCCEEEEEECCS-----SSCCEEEEEEECSSTTC-------------------------HHHHHHHHHH
T ss_pred             EEEeeEEeeCCCEEEEEEEEecC-----CCccEEEEEEEecccCC-------------------------HHHHHHHHHH
Confidence            88999999999999999987432     11256799998765210                         0111223568


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.++.+.+| .+-..+.....+|||||+. .|.....+..  ..++...+..++.||+.+|.+|| ..|||||||||
T Consensus       442 ~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDikp  519 (656)
T 2j0j_A          442 ALTMRQFDHPHIVKLIGVITENPVWIIMELCT-LGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAA  519 (656)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSCEEEEECCT-TCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSG
T ss_pred             HHHHHhCCCCCCCeEEEEEecCceEEEEEcCC-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccch
Confidence            899999977663 2222222345689999995 3444333432  35788888999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .|||+. ++.++|+|||.|....
T Consensus       520 ~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          520 RNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             GGEEEEETTEEEECCCCCCCSCC
T ss_pred             HhEEEeCCCCEEEEecCCCeecC
Confidence            999994 7899999999997653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.68  E-value=1.7e-16  Score=157.57  Aligned_cols=137  Identities=15%  Similarity=0.135  Sum_probs=97.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|.+.+.||+|+||.||.+.. .+        |+.||||++....   .                          ..+.+
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~-~~--------g~~vAvK~~~~~~---~--------------------------~~~~~   57 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGS-FQ--------GRPVAVKRMLIDF---C--------------------------DIALM   57 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEE-SS--------SSEEEEEEEEGGG---H--------------------------HHHHH
T ss_pred             eeeccCeEeeCCCeEEEEEEE-EC--------CeEEEEEEEcHHH---H--------------------------HHHHH
Confidence            477889999999999987755 56        8999999886421   0                          01346


Q ss_pred             HHHHHHHh-hhCCCCccccccc----cceEEEEcccCcccccccccccCCC--------CHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPL--------TESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l--------~~~~~~~l~~qll~~L~~LH~  182 (351)
                      |+..|.++ .+.+|  ++.+..    ...+|||||++  |.....+.....        +...+..++.||+.+|.+|| 
T Consensus        58 E~~~l~~l~~HpnI--v~~~~~~~~~~~~~lv~E~~~--gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-  132 (434)
T 2rio_A           58 EIKLLTESDDHPNV--IRYYCSETTDRFLYIALELCN--LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-  132 (434)
T ss_dssp             HHHHHHHHTTSTTB--CCEEEEEECSSEEEEEECCCS--EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHhccCCCCc--CeEEEEEecCCeEEEEEecCC--CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH-
Confidence            88888877 45543  222322    34579999994  544333333221        22235679999999999999 


Q ss_pred             hCCccccCCCCCceEEeC--------------CeEEEEEccccccCC
Q psy10135        183 KCHLVHADLSEYNMLVHK--------------ATLFIIDVAQSVEHD  215 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~~--------------g~l~IIDFG~Av~~~  215 (351)
                      .+|||||||||.|||+..              +.++|+|||.|....
T Consensus       133 ~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~  179 (434)
T 2rio_A          133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD  179 (434)
T ss_dssp             HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECC
T ss_pred             HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecC
Confidence            599999999999999953              379999999997553

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.66  E-value=7.1e-17  Score=170.00  Aligned_cols=144  Identities=17%  Similarity=0.131  Sum_probs=105.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||.|+||.||+|.+..+        |+.||||+++.....                         .......+
T Consensus        15 rY~i~~~LG~G~fG~Vyla~~~~t--------g~~VAVKvi~~~~~~-------------------------~~~~~~~~   61 (676)
T 3qa8_A           15 PWEMKERLGTGGFGYVLRWIHQDT--------GEQVAIKQCRQELSP-------------------------KNRERWCL   61 (676)
T ss_dssp             --CCCCCCCBCSSSBCCCCCCTTT--------TCCEEECCCCSCCCH-------------------------HHHHHHHH
T ss_pred             CeEEEEEEeeCCCeEEEEEEECCC--------CcEEEEEEecccCCH-------------------------HHHHHHHH
Confidence            389999999999999999998666        899999998753100                         01112356


Q ss_pred             HHHHHHHhhhCCCC-cccccc-------ccceEEEEcccCccccccccccc----CCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-------LKSHVLLMTFIGEDGWPAAKLKD----TPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~----~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+..|.+|.+.+|. +...+.       ....+|||||+. +|.....+..    ..++...+..++.+|+.+|.+|| .
T Consensus        62 Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~-ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH-s  139 (676)
T 3qa8_A           62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE-GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH-E  139 (676)
T ss_dssp             HHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCS-SCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCC-CCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH-H
Confidence            89999999877642 111111       234579999995 3433333332    14788889999999999999999 5


Q ss_pred             CCccccCCCCCceEEeC-C---eEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVHK-A---TLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~~-g---~l~IIDFG~Av~~  214 (351)
                      +|||||||||.|||+.. +   .++|+|||.|...
T Consensus       140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~  174 (676)
T 3qa8_A          140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL  174 (676)
T ss_dssp             TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred             CCCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence            99999999999999963 3   3999999999764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.66  E-value=2.4e-16  Score=157.00  Aligned_cols=136  Identities=13%  Similarity=0.135  Sum_probs=97.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.++||.|+||.||.... .+        |+.||||++.....      .      .                 +.+
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~-~~--------~~~vAvK~~~~~~~------~------~-----------------~~~   66 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGM-FD--------NRDVAVKRILPECF------S------F-----------------ADR   66 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEE-SS--------SSEEEEEEECTTTE------E------E-----------------CHH
T ss_pred             EEecCCeeecCcCEEEEEEEE-eC--------CeEEEEEEECHHHH------H------H-----------------HHH
Confidence            489999999999999765444 45        89999999865210      0      0                 135


Q ss_pred             HHHHHHHh-hhCCCCccccccc----cceEEEEcccCcccccccccccC--CCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRM-YSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL-~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~--~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+..|+.+ .+.+|  ...+..    ...+|||||++  |.....+...  .+...++..++.||+.+|.+|| .+||||
T Consensus        67 E~~~l~~l~~HpnI--v~l~~~~~~~~~~~lv~E~~~--g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH  141 (432)
T 3p23_A           67 EVQLLRESDEHPNV--IRYFCTEKDRQFQYIAIELCA--ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH-SLNIVH  141 (432)
T ss_dssp             HHHHHHHSCCCTTB--CCEEEEEEETTEEEEEEECCS--EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHHhccCCCCc--CeEEEEEecCCEEEEEEECCC--CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH-HCcCEe
Confidence            88888888 44442  222221    34589999994  5444444332  3444567789999999999999 599999


Q ss_pred             cCCCCCceEEe----CC--eEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH----KA--TLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~----~g--~l~IIDFG~Av~~  214 (351)
                      |||||.|||+.    ++  +++|+|||.|...
T Consensus       142 rDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            99999999994    22  5889999999654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.50  E-value=8.7e-14  Score=127.58  Aligned_cols=134  Identities=19%  Similarity=0.165  Sum_probs=100.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+...++.|+.+.||++..  .        |..+++|+.+.....  ..       .                 ...+|
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~--~--------~~~~vlK~~~~~~~~--~~-------~-----------------~~~~E   59 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVG--E--------NENLYLKMTDSRYKG--TT-------Y-----------------DVERE   59 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEEC--S--------SCEEEEEEECGGGTT--ST-------T-----------------CHHHH
T ss_pred             ceeEeeccCCCCCeEEEEEC--C--------CCcEEEEeCCcccCC--CH-------H-----------------HHHHH
Confidence            78888999999999999975  3        679999998752110  00       0                 13568


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhh---------
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNK---------  183 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~---------  183 (351)
                      +.+|..|.. ++++|+++..    +..++||||+  +|.++....   .+..+...++.++..+++.||.-         
T Consensus        60 ~~~l~~l~~-~~~vP~v~~~~~~~~~~~lv~e~i--~G~~l~~~~---~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~  133 (263)
T 3tm0_A           60 KDMMLWLEG-KLPVPKVLHFERHDGWSNLLMSEA--DGVLCSEEY---EDEQSPEKIIELYAECIRLFHSIDISDCPYTN  133 (263)
T ss_dssp             HHHHHHHTT-TSCCCCEEEEEEETTEEEEEEECC--SSEEHHHHC---CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBC
T ss_pred             HHHHHHHhc-CCCCCeEEEEEecCCceEEEEEec--CCeehhhcc---CCcccHHHHHHHHHHHHHHHhCCCcccCCCcc
Confidence            999999977 6899999865    3457999999  575543321   12223457888999999999950         


Q ss_pred             -------------------------------------------------CCccccCCCCCceEEeCCeE-EEEEccccc
Q psy10135        184 -------------------------------------------------CHLVHADLSEYNMLVHKATL-FIIDVAQSV  212 (351)
Q Consensus       184 -------------------------------------------------~glVH~DLkp~NILi~~g~l-~IIDFG~Av  212 (351)
                                                                       .++||+|++|.|||++++++ .||||+.|.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          134 SLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             hHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                                             45999999999999988776 599999884

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.50  E-value=8.5e-14  Score=125.94  Aligned_cols=129  Identities=16%  Similarity=0.131  Sum_probs=93.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      +.+....+.|..+.||++.. .+        |..+++|+.....  .   .                        ....|
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~-~~--------g~~~vlK~~~~~~--~---~------------------------~~~~E   63 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSA-QG--------RPVLFVKTDLSGA--L---N------------------------ELQDE   63 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEEC-TT--------SCCEEEEEECSCT--T---S------------------------CHHHH
T ss_pred             CceEecccCCCCceEEEEec-CC--------CCeEEEEeCCccc--c---h------------------------hhhHH
Confidence            44443444666799999976 55        7889999976520  0   0                        02468


Q ss_pred             HHHHHHhhhCCCCcccccccc----ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCC-------
Q psy10135        117 MRNLTRMYSEGLNVPKPILLK----SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH-------  185 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~~----~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~g-------  185 (351)
                      +.+|..|...|+++|+++...    ..++||||+  .|.++. +.  ..+   ...++.+++..++.||. ..       
T Consensus        64 ~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i--~G~~l~-~~--~~~---~~~~~~~l~~~l~~lh~-~~~~~~~~~  134 (264)
T 1nd4_A           64 AARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV--PGQDLL-SS--HLA---PAEKVSIMADAMRRLHT-LDPATCPFD  134 (264)
T ss_dssp             HHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC--SSEETT-TS--CCC---HHHHHHHHHHHHHHHTT-SCGGGCCCB
T ss_pred             HHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec--CCcccC-cC--cCC---HhHHHHHHHHHHHHHhC-CCCCCCCCc
Confidence            999999988899999998653    348999999  565543 11  122   23667778888888884 32       


Q ss_pred             ---------------------------------------------------ccccCCCCCceEEeCCeEE-EEEccccc
Q psy10135        186 ---------------------------------------------------LVHADLSEYNMLVHKATLF-IIDVAQSV  212 (351)
Q Consensus       186 ---------------------------------------------------lVH~DLkp~NILi~~g~l~-IIDFG~Av  212 (351)
                                                                         ++|+||+|.|||++++++. ||||+.|.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          135 HQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                                               9999999999999887765 99999985

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.48  E-value=2.1e-13  Score=131.36  Aligned_cols=172  Identities=16%  Similarity=0.176  Sum_probs=118.8

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEee--CCchhhhhccccccccccccccccCCChhHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFK--TSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEM  117 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k--~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~  117 (351)
                      ...|+.|..+.||++.. .         +..+++|+..  ++.... .                        .....+|+
T Consensus        43 ~~~l~~G~sn~~y~v~~-~---------~~~~vlr~~~~p~~~~~~-~------------------------~~~~~~E~   87 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVT-P---------GQTYVMRAKPGPKSKLLP-S------------------------AHAIEREY   87 (359)
T ss_dssp             EEECCC-CCSCEEEEEC-S---------SCEEEEECCCC-----------------------------------CHHHHH
T ss_pred             EEEcCCcccceEEEEEE-C---------CceEEEEeCCCCCCCCCC-c------------------------HHHHHHHH
Confidence            46789999999999976 3         5689999886  432100 0                        01235799


Q ss_pred             HHHHHhhhCCCCccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--------
Q psy10135        118 RNLTRMYSEGLNVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN--------  182 (351)
Q Consensus       118 ~nL~rL~~~gi~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~--------  182 (351)
                      ++|..|...|+++|+++..       +..++||||+  +|..+..-.-..++..+...++.+++..|..||.        
T Consensus        88 ~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v--~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~  165 (359)
T 3dxp_A           88 RVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV--SGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGL  165 (359)
T ss_dssp             HHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC--CCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTC
T ss_pred             HHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec--CCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccc
Confidence            9999999999999999865       2368999999  4654422112246777888899999999999995        


Q ss_pred             -------------------------------------------------hCCccccCCCCCceEEeC-C-e-EEEEEccc
Q psy10135        183 -------------------------------------------------KCHLVHADLSEYNMLVHK-A-T-LFIIDVAQ  210 (351)
Q Consensus       183 -------------------------------------------------~~glVH~DLkp~NILi~~-g-~-l~IIDFG~  210 (351)
                                                                       ..++||+|++|.|||+++ + . +.||||+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~  245 (359)
T 3dxp_A          166 GDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWEL  245 (359)
T ss_dssp             TTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTT
T ss_pred             cccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccc
Confidence                                                             147999999999999964 3 3 68999998


Q ss_pred             cccCCCCChHHHHHhhhhhhhhccccC--------------CCCCcHHHHHHhhhhcCC
Q psy10135        211 SVEHDHPHALQFLRKDCDNVTVFVILN--------------PVSDDDEKIFKKWDSDYV  255 (351)
Q Consensus       211 Av~~~~p~a~~fl~~D~~~v~~ff~~~--------------~~~~~~~~~~~~~~~~~~  255 (351)
                      |. .++|      ..|+..+.-+|...              ++++..+++++.|.+...
T Consensus       246 a~-~g~p------~~DLa~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~Y~~~~g  297 (359)
T 3dxp_A          246 ST-LGHP------MGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTG  297 (359)
T ss_dssp             CE-EECH------HHHHHHHGGGGTSCSSSSCCCTTSCHHHHTCCCHHHHHHHHHHHHS
T ss_pred             cc-cCCH------HHHHHHHHHHhccCccccccccCCCccCCCCCCHHHHHHHHHHHhC
Confidence            85 3443      44665555444221              234456788888876543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=99.12  E-value=2.9e-10  Score=104.28  Aligned_cols=133  Identities=22%  Similarity=0.208  Sum_probs=89.8

Q ss_pred             eeeecCc-eEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         42 CISTGKE-ANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        42 ~Ig~G~~-a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      .+..|.- +.||+......        +..+++|+.+...                             ......|+..|
T Consensus        31 ~~~~G~S~~~v~rl~~~~~--------~~~~~lk~~~~~~-----------------------------~~~~~~E~~~l   73 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPN--------APELFLKHGKGSV-----------------------------ANDVTDEMVRL   73 (272)
T ss_dssp             EEECSSSSCEEEEEECCTT--------CCCEEEEEEETHH-----------------------------HHHHHHHHHHH
T ss_pred             EccCCCcCCeEEEEEecCC--------CeEEEEEECCCCC-----------------------------HhHHHHHHHHH
Confidence            3444443 46999877444        6789999876521                             01134688999


Q ss_pred             HHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--------------
Q psy10135        121 TRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN--------------  182 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~--------------  182 (351)
                      ..|.. +++||+++..    ...++|||++  .|.++.....  ........++.++...|+.||.              
T Consensus        74 ~~l~~-~vPVP~v~~~~~~~~~~~lvme~l--~G~~~~~~~~--~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~  148 (272)
T 4gkh_A           74 NWLTA-FMPLPTIKHFIRTPDDAWLLTTAI--PGKTAFQVLE--EYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVF  148 (272)
T ss_dssp             HHHTT-TSCCCCEEEEEEETTEEEEEEECC--CSEEHHHHHH--HCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHH
T ss_pred             HHhcc-CCCcCeEEEEEEECCeEEEEEEee--CCcccccccc--CCHHHHHHHHHHHHHHHHHhcCCCcccCCcCccccc
Confidence            98865 6999999864    4568999999  4654332211  1123345667777777777770              


Q ss_pred             -------------------------------------------hCCccccCCCCCceEEeCCeE-EEEEccccccCCCC
Q psy10135        183 -------------------------------------------KCHLVHADLSEYNMLVHKATL-FIIDVAQSVEHDHP  217 (351)
Q Consensus       183 -------------------------------------------~~glVH~DLkp~NILi~~g~l-~IIDFG~Av~~~~p  217 (351)
                                                                 ...+||+|++|.|||++++++ .||||+.|. .++|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~-~gdp  226 (272)
T 4gkh_A          149 RLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG-IADR  226 (272)
T ss_dssp             HHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE-EEET
T ss_pred             chhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc-cCCH
Confidence                                                       113899999999999988765 599999985 3444

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.10  E-value=7.5e-10  Score=104.10  Aligned_cols=133  Identities=22%  Similarity=0.241  Sum_probs=95.4

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..++.|..+.||++             +..+++|+.+..                            .......+|++.|
T Consensus        26 ~~~~~G~~n~v~~v-------------~~~~vlR~~~~~----------------------------~~~~~~~~E~~~l   64 (304)
T 3sg8_A           26 EISGEGNDCIAYEI-------------NRDFIFKFPKHS----------------------------RGSTNLFNEVNIL   64 (304)
T ss_dssp             CEEEECSSEEEEES-------------TTSEEEEEESSH----------------------------HHHHHHHHHHHHH
T ss_pred             EecCCCCcceEEEE-------------CCEEEEEecCCc----------------------------chHHHHHHHHHHH
Confidence            56999999999985             235999986542                            0112246799999


Q ss_pred             HHhh-hCCCCcccccccc-------ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh----------
Q psy10135        121 TRMY-SEGLNVPKPILLK-------SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN----------  182 (351)
Q Consensus       121 ~rL~-~~gi~vP~pi~~~-------~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~----------  182 (351)
                      ..|. ..++++|.++...       ..++||+|+  +|.++.......++.++...++.+++..++.||.          
T Consensus        65 ~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i--~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~  142 (304)
T 3sg8_A           65 KRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI--KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNL  142 (304)
T ss_dssp             HHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC--CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGG
T ss_pred             HHHHhcCCCCCCceEeecCCCCCCCcceEEEccc--CCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccc
Confidence            9984 4678999998652       237899999  5765543222346677777888888888888883          


Q ss_pred             -----------------------------------------------hCCccccCCCCCceEEeC--Ce-EEEEEccccc
Q psy10135        183 -----------------------------------------------KCHLVHADLSEYNMLVHK--AT-LFIIDVAQSV  212 (351)
Q Consensus       183 -----------------------------------------------~~glVH~DLkp~NILi~~--g~-l~IIDFG~Av  212 (351)
                                                                     ...+||+|++|.|||+++  +. +.||||+.|.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~  222 (304)
T 3sg8_A          143 VLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA  222 (304)
T ss_dssp             BCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence                                                           024799999999999976  54 6799999985


Q ss_pred             cCCCC
Q psy10135        213 EHDHP  217 (351)
Q Consensus       213 ~~~~p  217 (351)
                      . ++|
T Consensus       223 ~-~~~  226 (304)
T 3sg8_A          223 I-SDP  226 (304)
T ss_dssp             E-ECT
T ss_pred             c-CCh
Confidence            4 344

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=99.09  E-value=4.3e-10  Score=107.67  Aligned_cols=83  Identities=8%  Similarity=0.154  Sum_probs=51.9

Q ss_pred             ccee-eecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         40 NGCI-STGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        40 ~~~I-g~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      ...| +.|..+.+|+... .. ...+...|..+++|+...... .    .... .                 .....|++
T Consensus        25 ~~~l~~~G~~n~~y~v~~-~~-~~~~~~~~~~~vlR~~~~~~~-~----~~~~-~-----------------~~~~~E~~   79 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTA-RW-QQDGRSIQQKLVARVAPAAED-V----PVFP-T-----------------YRLDHQFE   79 (357)
T ss_dssp             EEEECTTSSEEEEEEEEE-EE-EETTEEEEEEEEEEECCCGGG-C----CSSS-C-----------------CCHHHHHH
T ss_pred             EEECCCCCccceEEEEEE-ec-ccCCCCCCceEEEEeCCCCCc-c----ccCc-h-----------------hHHHHHHH
Confidence            3567 8899999999875 20 000000056899998765210 0    0000 0                 01256899


Q ss_pred             HHHHhhhC-CCCccccccc-------cceEEEEcccC
Q psy10135        119 NLTRMYSE-GLNVPKPILL-------KSHVLLMTFIG  147 (351)
Q Consensus       119 nL~rL~~~-gi~vP~pi~~-------~~~vLVMEfig  147 (351)
                      +|..|... ++++|+++..       +..++||||++
T Consensus        80 ~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~  116 (357)
T 3ats_A           80 VIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVE  116 (357)
T ss_dssp             HHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCC
T ss_pred             HHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecC
Confidence            99999876 8999999864       23579999994

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=99.07  E-value=1e-09  Score=104.05  Aligned_cols=133  Identities=17%  Similarity=0.195  Sum_probs=90.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..++.|..+.||+.             |..+++|+.+..                            .......+|+++|
T Consensus        25 ~~l~~G~~n~v~~v-------------g~~~VlR~~~~~----------------------------~~~~~~~~E~~~L   63 (306)
T 3tdw_A           25 ESLGEGFRNYAILV-------------NGDWVFRFPKSQ----------------------------QGADELNKEIQLL   63 (306)
T ss_dssp             EEEEECSSEEEEEE-------------TTTEEEEEESSH----------------------------HHHHHHHHHHHHH
T ss_pred             eecCCCcceeEEEE-------------CCEEEEEecCCc----------------------------hHHHHHHHHHHHH
Confidence            56899999999987             235899985431                            0112346799999


Q ss_pred             HHhhh-CCCCccccccccc-----eEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh------------
Q psy10135        121 TRMYS-EGLNVPKPILLKS-----HVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN------------  182 (351)
Q Consensus       121 ~rL~~-~gi~vP~pi~~~~-----~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~------------  182 (351)
                      ..|.. .++++|+++....     .++||+|+  +|.++....-..++..+...++.++...|..||.            
T Consensus        64 ~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i--~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p  141 (306)
T 3tdw_A           64 PLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV--QGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVP  141 (306)
T ss_dssp             HHHTTTCSSBCCCEEEEEECTTSCEEEEEECC--CSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCC
T ss_pred             HHHHhcCCCCCCCeEeecccCCCceEEEEecc--CCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Confidence            99976 4689999987653     68999999  5765543211223444444555555555555552            


Q ss_pred             -----------------------------------------------hCCccccCCCCCceEEeC----CeE-EEEEccc
Q psy10135        183 -----------------------------------------------KCHLVHADLSEYNMLVHK----ATL-FIIDVAQ  210 (351)
Q Consensus       183 -----------------------------------------------~~glVH~DLkp~NILi~~----g~l-~IIDFG~  210 (351)
                                                                     ...+||+|++|.|||+.+    +++ .||||+.
T Consensus       142 ~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~  221 (306)
T 3tdw_A          142 VTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGD  221 (306)
T ss_dssp             BCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTT
T ss_pred             hHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhh
Confidence                                                           124699999999999975    665 7999998


Q ss_pred             cccCCCC
Q psy10135        211 SVEHDHP  217 (351)
Q Consensus       211 Av~~~~p  217 (351)
                      |.. ++|
T Consensus       222 a~~-gd~  227 (306)
T 3tdw_A          222 AAI-SDP  227 (306)
T ss_dssp             CEE-ECG
T ss_pred             cCC-CCH
Confidence            753 444

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=99.05  E-value=2.3e-09  Score=100.95  Aligned_cols=174  Identities=16%  Similarity=0.190  Sum_probs=101.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|..+.+|+... .+        | .+++|++....    ..                        .....|+..+
T Consensus        28 ~~i~~G~~n~~~~v~~-~~--------g-~~vlk~~~~~~----~~------------------------~~l~~e~~~l   69 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHT-TK--------D-PLILTLYEKRV----EK------------------------NDLPFFLGLM   69 (322)
T ss_dssp             EEECC---EEEEEEEE-SS--------C-CEEEEEECC-------C------------------------CHHHHHHHHH
T ss_pred             eccCCCcccceEEEEe-CC--------c-cEEEEEeCCCC----CH------------------------HHHHHHHHHH
Confidence            5678899999999987 43        4 79999987620    00                        0123588899


Q ss_pred             HHhhhCCCCccccccc----------cceEEEEcccCccccccc---------------cccc----CC------CCHHH
Q psy10135        121 TRMYSEGLNVPKPILL----------KSHVLLMTFIGEDGWPAA---------------KLKD----TP------LTESG  165 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~----------~~~vLVMEfig~~G~~~~---------------~L~~----~~------l~~~~  165 (351)
                      ..|...|++||+|+..          +..++||+|+.  |.+..               ++..    ..      .....
T Consensus        70 ~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~--G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~  147 (322)
T 2ppq_A           70 QHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE--GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDG  147 (322)
T ss_dssp             HHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC--CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHH
T ss_pred             HHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC--CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHH
Confidence            9999889999999853          23578999994  43211               1110    00      01111


Q ss_pred             HHHHHH---------------HHHHHHHHHHh------hCCccccCCCCCceEEeCCeE-EEEEccccccCCCCChHHHH
Q psy10135        166 ACKLYR---------------ECVVMMWRLYN------KCHLVHADLSEYNMLVHKATL-FIIDVAQSVEHDHPHALQFL  223 (351)
Q Consensus       166 ~~~l~~---------------qll~~L~~LH~------~~glVH~DLkp~NILi~~g~l-~IIDFG~Av~~~~p~a~~fl  223 (351)
                      +...+.               .+...+..+..      ..++||+|++|.|||+.++++ .||||+.|..       ...
T Consensus       148 w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~-------g~~  220 (322)
T 2ppq_A          148 WKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN-------DLL  220 (322)
T ss_dssp             HHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE-------EEH
T ss_pred             HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC-------chh
Confidence            111111               12222333321      247999999999999988776 7999998842       233


Q ss_pred             Hhhhhhhhh-cc-ccCCCCCc--HHHHHHhhhhcCCCCcccc
Q psy10135        224 RKDCDNVTV-FV-ILNPVSDD--DEKIFKKWDSDYVTSSDED  261 (351)
Q Consensus       224 ~~D~~~v~~-ff-~~~~~~~~--~~~~~~~~~~~~~~~~~~~  261 (351)
                      ..|+..... |. ......+.  ...++++|.+..+.+.++.
T Consensus       221 ~~Dla~~l~~~~~~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~  262 (322)
T 2ppq_A          221 AYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAEL  262 (322)
T ss_dssp             HHHHHHHHHHHSBCTTSCBCHHHHHHHHHHHHTTSCCCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHH
Confidence            456655443 22 11112222  7889999988766544443

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=99.02  E-value=1.8e-09  Score=101.50  Aligned_cols=71  Identities=18%  Similarity=0.279  Sum_probs=47.3

Q ss_pred             hCCccccCCCCCceEEe-CCeEEEEEccccccCCCCChHHHHHhhhhhhhhcc-ccCCCCC--cHHHHHHhhhhcCCCCc
Q psy10135        183 KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV-ILNPVSD--DDEKIFKKWDSDYVTSS  258 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff-~~~~~~~--~~~~~~~~~~~~~~~~~  258 (351)
                      ..++||+|++|.|||++ ++.+.||||+.|. .++|      ..|+..+...+ .......  ..+.++++|.+..+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~-~g~~------~~Dla~~l~~~~~~~~~~~~~~~~~~l~~Y~~~~~l~~  293 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS-FDLP------IRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTE  293 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE-ECCT------HHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHSCCCH
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc-cCCh------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCH
Confidence            46899999999999995 6789999999884 2333      44555544332 2112222  27888999887765444


Q ss_pred             cc
Q psy10135        259 DE  260 (351)
Q Consensus       259 ~~  260 (351)
                      ++
T Consensus       294 ~e  295 (346)
T 2q83_A          294 EQ  295 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=99.00  E-value=2.5e-09  Score=99.89  Aligned_cols=171  Identities=16%  Similarity=0.134  Sum_probs=105.2

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...+|.|..+.||+... .+        |+.|++|+........                      ..    ..+.|++.
T Consensus        20 v~~~g~G~~~~vyrv~l-~D--------G~~~~vK~~~~~~~~~----------------------~~----~~~~Ea~~   64 (288)
T 3f7w_A           20 VAERGHSHRWHLYRVEL-AD--------GTPLFVKALPDDAPAL----------------------DG----LFRAEALG   64 (288)
T ss_dssp             EEEEEEETTEEEEEEEE-TT--------SCEEEEEECCTTCCCC----------------------TT----HHHHHHHH
T ss_pred             EEecCCCCCeEEEEEEE-CC--------CCEEEEEEeCCCCcch----------------------hh----HHHHHHHH
Confidence            46789999999999998 77        9999999876431100                      00    13579999


Q ss_pred             HHHhhhC-CCCccccccccceEEEEcccCccc-c---------cccccccCC----------------------CCHH--
Q psy10135        120 LTRMYSE-GLNVPKPILLKSHVLLMTFIGEDG-W---------PAAKLKDTP----------------------LTES--  164 (351)
Q Consensus       120 L~rL~~~-gi~vP~pi~~~~~vLVMEfig~~G-~---------~~~~L~~~~----------------------l~~~--  164 (351)
                      |+.|... +++||+++.....++||||+.... .         .+..+....                      -+..  
T Consensus        65 L~~L~~~~~vpvP~v~~~~~~~lv~e~l~~~~~~~~~~~~lg~~La~lH~~~~~~fg~~~~~~~g~~~~~~~~~~~w~~~  144 (288)
T 3f7w_A           65 LDWLGRSFGSPVPQVAGWDDRTLAMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEF  144 (288)
T ss_dssp             HHHHTCSTTCCSCCEEEEETTEEEEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHH
T ss_pred             HHHHHhhCCCCcceEEeccCceEEEEeecccCCChHHHHHHHHHHHhhhhccccccccccccccccccccCcccccchhh
Confidence            9999765 699999999999999999995211 0         011111000                      0000  


Q ss_pred             ---------------------HHHHHHHHHHHHHHHHH---hhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChH
Q psy10135        165 ---------------------GACKLYRECVVMMWRLY---NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHAL  220 (351)
Q Consensus       165 ---------------------~~~~l~~qll~~L~~LH---~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~  220 (351)
                                           .....+..++..+..+-   ..-.|||+||++.|||++.+.+.|||-.  ...+||.  
T Consensus       145 ~~~~rl~~~~~~~~~~~~~~~~~~~~~e~l~~~L~~~~~~~~~p~LvHGDlw~gNvl~~~~g~~~iDp~--~~~g~~e--  220 (288)
T 3f7w_A          145 YAEQRILPYLRRAADRGALTPGDVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDDGAVVIDPA--AHGGHRE--  220 (288)
T ss_dssp             HHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETTEEEECSCC--CEEECHH--
T ss_pred             hHHhhHHHHHHHHHhccCcchhhhHHHHHHHHHHHHhcccCCCCeeeecCCCCCcEEEcCCCeEEEecc--cccCCHH--
Confidence                                 00111222222222221   1236999999999999998888999854  3345552  


Q ss_pred             HHHHhhhhhhhhccccCCCCCcHHHHHHhhhhcCCCCc
Q psy10135        221 QFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSS  258 (351)
Q Consensus       221 ~fl~~D~~~v~~ff~~~~~~~~~~~~~~~~~~~~~~~~  258 (351)
                          .|+....- |..  .+  .++++++|.+..+.++
T Consensus       221 ----~Dla~~~~-fg~--~~--~~~f~~~Y~~~~pl~~  249 (288)
T 3f7w_A          221 ----ADLAMLAL-FGL--PY--LDRVRDAYNEVAPLAE  249 (288)
T ss_dssp             ----HHHHHHHH-HCC--TT--HHHHHHHHHHHSCCCT
T ss_pred             ----HHHHHHHh-cCC--Cc--hHHHHHHHHhhCCCCc
Confidence                34543332 321  11  4678888888776544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.83  E-value=2.5e-08  Score=93.57  Aligned_cols=156  Identities=15%  Similarity=0.149  Sum_probs=94.2

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...|+.|-.+.+|++   .           .+++|++......+.+                           .+.|+.+
T Consensus        23 i~~l~gG~tN~~~~~---~-----------~~vlR~~~~~~~~~~~---------------------------r~~E~~~   61 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA---G-----------DLCLRIPGKGTEEYIN---------------------------RANEAVA   61 (301)
T ss_dssp             CEEEESCSSEEEEEE---T-----------TEEEEEECC----CCC---------------------------HHHHHHH
T ss_pred             eeEcCCcccccccee---e-----------eEEEECCCCCccceeC---------------------------HHHHHHH
Confidence            478899999999998   2           3899998763211100                           1358999


Q ss_pred             HHHhhhCCCCccccccccc--eEEEEcccCcccccccc--cccCCCCHHHHHHHHHHHHHHHHHHHh-------------
Q psy10135        120 LTRMYSEGLNVPKPILLKS--HVLLMTFIGEDGWPAAK--LKDTPLTESGACKLYRECVVMMWRLYN-------------  182 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~~~~--~vLVMEfig~~G~~~~~--L~~~~l~~~~~~~l~~qll~~L~~LH~-------------  182 (351)
                      +..|...|+. |+++....  .++||||+. +|.++..  +.+       ...++.+++..|+.||.             
T Consensus        62 l~~l~~~g~~-P~~~~~~~~~~~~v~e~i~-~g~~l~~~~~~~-------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~  132 (301)
T 3dxq_A           62 AREAAKAGVS-PEVLHVDPATGVMVTRYIA-GAQTMSPEKFKT-------RPGSPARAGEAFRKLHGSGAVFPFRFELFA  132 (301)
T ss_dssp             HHHHHHTTSS-CCEEEECTTTCCEEEECCT-TCEECCHHHHHH-------STTHHHHHHHHHHHHHTSCCCCSSBCCHHH
T ss_pred             HHHHHHcCCC-CceEEEECCCCEEEEeecC-CCccCCHhhHhh-------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence            9999999987 99987654  789999992 2432210  000       00122222222222221             


Q ss_pred             ---------------------------------------hCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHH
Q psy10135        183 ---------------------------------------KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFL  223 (351)
Q Consensus       183 ---------------------------------------~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl  223 (351)
                                                             ...++|+|++|.|||..++++.||||..|.. ++|      
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil~~~~~~~lID~e~a~~-g~~------  205 (301)
T 3dxq_A          133 MIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTGERMWIVDWEYSGM-NDP------  205 (301)
T ss_dssp             HHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEEECSSCEEECCCTTCEE-ECT------
T ss_pred             HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEEECCCCEEEEecccccC-CCH------
Confidence                                                   1248999999999998788999999998752 332      


Q ss_pred             HhhhhhhhhccccCCCCCcHHHHHHhhhhcC
Q psy10135        224 RKDCDNVTVFVILNPVSDDDEKIFKKWDSDY  254 (351)
Q Consensus       224 ~~D~~~v~~ff~~~~~~~~~~~~~~~~~~~~  254 (351)
                      ..|+.+...+.  .......+.+++.|....
T Consensus       206 ~~Dla~~~~~~--~~~~~~~~~~l~~Y~~~~  234 (301)
T 3dxq_A          206 LWDLGDLSVEG--KFNANQDEELMRAYFGGE  234 (301)
T ss_dssp             HHHHHHHHHHT--TCCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHh--CCCHHHHHHHHHHHhCCC
Confidence            23444433221  111112567777776543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=98.82  E-value=2e-08  Score=96.91  Aligned_cols=78  Identities=8%  Similarity=0.065  Sum_probs=49.7

Q ss_pred             ceeeecCceEEEEEEeCCCccc-ccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKI-ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~-~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ..|+.|-...+|++.. .+... .....+..+++|++......+      +                     ....|+.+
T Consensus        39 ~~l~~G~~N~~y~v~~-~~~~~~~~~~~~~~~vlRi~~~~~~~~------~---------------------~~~~E~~~   90 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGL-KEETANNYNSIRTRVLFRIYGKHVDEL------Y---------------------NTISEFEV   90 (369)
T ss_dssp             EEC----CCEEEEEEE-CHHHHTTCTTSCCEEEEEECCTTGGGT------S---------------------CHHHHHHH
T ss_pred             EEeCCcccceEEEEEe-CCCCcccccCCCceEEEEecCCCccce------e---------------------cHHHHHHH
Confidence            5788899999999986 21000 000012689999987532111      0                     01468999


Q ss_pred             HHHhhhCCCCccccccccceEEEEcccC
Q psy10135        120 LTRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      |..|...|+ +|+++.....++||+|+.
T Consensus        91 l~~L~~~g~-~P~~~~~~~~~~v~e~i~  117 (369)
T 3c5i_A           91 YKTMSKYKI-APQLLNTFNGGRIEEWLY  117 (369)
T ss_dssp             HHHHHHTTS-SCCEEEEETTEEEEECCC
T ss_pred             HHHHHhcCC-CCceEEecCCcEEEEEec
Confidence            999999998 999997767789999994

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=98.80  E-value=1.8e-08  Score=95.70  Aligned_cols=69  Identities=6%  Similarity=0.012  Sum_probs=42.7

Q ss_pred             ceeeecCceE-EEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEAN-VYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        41 ~~Ig~G~~a~-VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ..|+.|..+. +|+... .+        |..+++|...+...      .      .                 ...|+.+
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~--------~~~~vlk~~~~~~~------~------~-----------------~~~e~~~   65 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PT--------GAKAVLMDWSPEEG------G------D-----------------TQPFVDL   65 (333)
T ss_dssp             CC--------CCEEEEC-TT--------CCEEEEEECCTTTT------C------C-----------------SHHHHHH
T ss_pred             eECCCCCCCceEEEEEc-CC--------CCeEEEEECCCCCC------c------c-----------------ccHHHHH
Confidence            4676666655 667765 44        67888887554210      0      0                 1357889


Q ss_pred             HHHhhhCCCCcccccc--ccceEEEEcccC
Q psy10135        120 LTRMYSEGLNVPKPIL--LKSHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~~~gi~vP~pi~--~~~~vLVMEfig  147 (351)
                      +..|...|+++|+++.  ....++|||+++
T Consensus        66 l~~L~~~g~~vP~v~~~d~~~g~ll~e~l~   95 (333)
T 3csv_A           66 AQYLRNLDISAPEIYAEEHARGLLLIEDLG   95 (333)
T ss_dssp             HHHHHHTTCBCCCEEEEETTTTEEEECCCC
T ss_pred             HHHHHhCCCCCCceeeecCCCCEEEEeeCC
Confidence            9999888999999997  344589999996

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.79  E-value=1.3e-08  Score=99.12  Aligned_cols=81  Identities=19%  Similarity=0.158  Sum_probs=49.6

Q ss_pred             cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHH
Q psy10135         40 NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN  119 (351)
Q Consensus        40 ~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~n  119 (351)
                      ...||.|..+.||++....+        ++.++||...+........  +.     +       .     ......|+++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~--------~~~~vvK~~~~~~r~~~~~--~~-----~-------~-----~~r~~~E~~~   87 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEH--------DRALIIKQAVPYAKVVGES--WP-----L-------T-----IDRARIESSA   87 (397)
T ss_dssp             EEECCSSSSEEEEEEEC------------CEEEEEEECCC---------CC-----C-------C-----TTHHHHHHHH
T ss_pred             EEECCCCceEEEEEEEECCC--------CcEEEEEecchhhcccCCC--Cc-----C-------c-----HHHHHHHHHH
Confidence            46899999999999976334        6899999876532100000  00     0       0     0012458888


Q ss_pred             HHHhhhC-CCCccccccc--cceEEEEcccC
Q psy10135        120 LTRMYSE-GLNVPKPILL--KSHVLLMTFIG  147 (351)
Q Consensus       120 L~rL~~~-gi~vP~pi~~--~~~vLVMEfig  147 (351)
                      |..+... +..+|+++..  ...+|||||++
T Consensus        88 L~~l~~~~~~~vP~~~~~d~~~~~lvmE~l~  118 (397)
T 2olc_A           88 LIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS  118 (397)
T ss_dssp             HHHHHTTCGGGSCCEEEEETTTTEEEECCCT
T ss_pred             HHHhhhhCCCCcCeEEEEcCCccEEEEEeCC
Confidence            8888653 3568888754  45689999995

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.76  E-value=4.8e-08  Score=93.66  Aligned_cols=163  Identities=15%  Similarity=0.187  Sum_probs=102.8

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|..+.+|+...  +        +..+++|+.....                             ......|++.|
T Consensus        42 ~~l~gG~~n~~y~v~~--~--------~~~~vlK~~~~~~-----------------------------~~~~~~E~~~L   82 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND--E--------VQTVFVKINERSY-----------------------------RSMFRAEADQL   82 (312)
T ss_dssp             EEECCSSSSEEEEEES--S--------SCEEEEEEEEGGG-----------------------------HHHHHHHHHHH
T ss_pred             EEeCCccceeeeEEEE--C--------CCeEEEEeCCccc-----------------------------HHHHHHHHHHH
Confidence            6789999999999976  3        6789999876421                             11235799999


Q ss_pred             HHhhhC-CCCcccccccc----ceEEEEcccCcccccc------------cccccCCC------C--------------H
Q psy10135        121 TRMYSE-GLNVPKPILLK----SHVLLMTFIGEDGWPA------------AKLKDTPL------T--------------E  163 (351)
Q Consensus       121 ~rL~~~-gi~vP~pi~~~----~~vLVMEfig~~G~~~------------~~L~~~~l------~--------------~  163 (351)
                      ..|... +++||+|+...    ..++||||+.  |.+.            ..|.....      +              .
T Consensus        83 ~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~--G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~  160 (312)
T 3jr1_A           83 ALLAKTNSINVPLVYGIGNSQGHSFLLLEALN--KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQ  160 (312)
T ss_dssp             HHHHHTTSSBCCCEEEEEECSSEEEEEEECCC--CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCB
T ss_pred             HHHHhhCCCCcceEEEEeecCCceEEEEEecc--CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCc
Confidence            999876 69999999763    4789999994  4321            11211100      0              0


Q ss_pred             HHHHHHHH----------------------HHHHHHH-HHH---hhCCccccCCCCCceEEeCCeEEEEEccccccCCCC
Q psy10135        164 SGACKLYR----------------------ECVVMMW-RLY---NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHP  217 (351)
Q Consensus       164 ~~~~~l~~----------------------qll~~L~-~LH---~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p  217 (351)
                      ..+..++.                      +++..+. .|.   ....+||+|+++.|+|+.++.+.||||. | ..++|
T Consensus       161 ~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~~~~iD~~-~-~~g~~  238 (312)
T 3jr1_A          161 TSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCNPA-C-YWGDR  238 (312)
T ss_dssp             SCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTEEEECSCC-C-EEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCCeEEEcCc-c-ccCCh
Confidence            12222221                      1222222 221   1356999999999999987669999984 3 46666


Q ss_pred             ChHHHHHhhhhhhhhccccCCCCCcHHHHHHhhhhcCCCCc
Q psy10135        218 HALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSS  258 (351)
Q Consensus       218 ~a~~fl~~D~~~v~~ff~~~~~~~~~~~~~~~~~~~~~~~~  258 (351)
                      .      .|+..+. .|..   +  .+.++++|.+..+.++
T Consensus       239 ~------~Dl~~~~-~~~~---~--~~~~~~~Y~~~~pl~~  267 (312)
T 3jr1_A          239 E------CDIAFSS-LFEP---F--PTNFYQRYNEIYPLEE  267 (312)
T ss_dssp             H------HHHHHHT-TSSC---C--CHHHHHHHHHHSCCCT
T ss_pred             H------HHHHHHH-HhCC---c--cHHHHHHHHHhCCCCh
Confidence            3      2443322 3421   1  3678888888776544

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=98.76  E-value=2.2e-08  Score=94.44  Aligned_cols=170  Identities=12%  Similarity=0.164  Sum_probs=99.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+ |..+.||++.. .+        |+.+++|++++....                           ......|+.++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~--------g~~~vlK~~~~~~~~---------------------------~~~~~~E~~~~   74 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-ED--------RRRFVVKFYRPERWT---------------------------ADQILEEHQFA   74 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TT--------CCCEEEEEECTTTSC---------------------------HHHHHHHHHHH
T ss_pred             Eeec-CcccceEEEEc-CC--------CCEEEEEEcCCCCCC---------------------------HHHHHHHHHHH
Confidence            3566 88999999876 45        778999999753100                           01124588999


Q ss_pred             HHhhhCCCCccccccc-c--------ceEEEEcccCccccccc---------------cccc----C------CCCHHH-
Q psy10135        121 TRMYSEGLNVPKPILL-K--------SHVLLMTFIGEDGWPAA---------------KLKD----T------PLTESG-  165 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~-~--------~~vLVMEfig~~G~~~~---------------~L~~----~------~l~~~~-  165 (351)
                      ..|...|+++|.|+.. +        ..++||+|++  |.+..               ++..    .      ..+... 
T Consensus        75 ~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~--G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~  152 (328)
T 1zyl_A           75 LQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG--GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEY  152 (328)
T ss_dssp             HHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC--CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHH
T ss_pred             HHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHH
Confidence            9999999999999874 1        2367999995  43211               0100    0      011111 


Q ss_pred             ---------------------HHHHHHHHHHHHHHHH---hhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHH
Q psy10135        166 ---------------------ACKLYRECVVMMWRLY---NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQ  221 (351)
Q Consensus       166 ---------------------~~~l~~qll~~L~~LH---~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~  221 (351)
                                           ...+...++..+..+.   ...++||+|++|.|||+.+ .+.||||+.|.. ++| +  
T Consensus       153 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~-~~~lIDfe~a~~-g~~-~--  227 (328)
T 1zyl_A          153 LIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRD-GPMFVDLDDARN-GPA-V--  227 (328)
T ss_dssp             THHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESS-SEEECCCTTCCE-ECT-T--
T ss_pred             HhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEcC-CCEEEECCCCCc-CcH-H--
Confidence                                 0112222333333332   1356899999999999985 899999998742 222 2  


Q ss_pred             HHHhhhhhhhhccccCCCCC--cHHHHHHhhhhcCCCCccc
Q psy10135        222 FLRKDCDNVTVFVILNPVSD--DDEKIFKKWDSDYVTSSDE  260 (351)
Q Consensus       222 fl~~D~~~v~~ff~~~~~~~--~~~~~~~~~~~~~~~~~~~  260 (351)
                         .|+..+.  + ......  ..+.++++|.+....+.++
T Consensus       228 ---~Dla~~l--~-~~~~~~~~~~~~~l~~Y~~~~~l~~~e  262 (328)
T 1zyl_A          228 ---QDLWMLL--N-GDKAEQRMQLETIIEAYEEFSEFDTAE  262 (328)
T ss_dssp             ---HHHHTTC--C-SSHHHHHHHHHHHHHHHTTTSCCCGGG
T ss_pred             ---HHHHHHh--c-CChHHHHHHHHHHHHHHHhcCCCCHHH
Confidence               2333321  1 110011  1577888887766544433

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=98.63  E-value=1.6e-07  Score=90.26  Aligned_cols=62  Identities=18%  Similarity=0.252  Sum_probs=47.1

Q ss_pred             eecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHh
Q psy10135         44 STGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRM  123 (351)
Q Consensus        44 g~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL  123 (351)
                      |.|..+.||+... .+        | .+++|+++....                                ..|+.+|..|
T Consensus        32 G~g~~N~vy~v~~-~~--------g-~~vLK~~~~~~~--------------------------------~~E~~~l~~L   69 (339)
T 3i1a_A           32 GADTNAFAYQADS-ES--------K-SYFIKLKYGYHD--------------------------------EINLSIIRLL   69 (339)
T ss_dssp             TSCSSCEEEEEEC-SS--------C-EEEEEEEECSSC--------------------------------CHHHHHHHHH
T ss_pred             cCccccceEEEEe-CC--------C-CEEEEEecCccc--------------------------------hHHHHHHHHH
Confidence            4444899999987 54        6 999999876310                                2478889999


Q ss_pred             hhCCCC-ccccccc----------cceEEEEcccC
Q psy10135        124 YSEGLN-VPKPILL----------KSHVLLMTFIG  147 (351)
Q Consensus       124 ~~~gi~-vP~pi~~----------~~~vLVMEfig  147 (351)
                      ...|++ ||.|+..          +..++||+|++
T Consensus        70 ~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           70 HDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             HHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             HhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            889999 9999864          23479999994

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.41  E-value=4.3e-07  Score=89.42  Aligned_cols=30  Identities=27%  Similarity=0.349  Sum_probs=26.8

Q ss_pred             hCCccccCCCCCceEEeCCeEEEEEccccc
Q psy10135        183 KCHLVHADLSEYNMLVHKATLFIIDVAQSV  212 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~~g~l~IIDFG~Av  212 (351)
                      ...++|+||+|.|||++++.+.||||+.|.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~~~lID~e~a~  260 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDSTQVIDPEFSF  260 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSCEEECCCTTCE
T ss_pred             CCeEEecCCCCCcEEEeCCCCEEEeCcccc
Confidence            468999999999999987669999999885

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=98.39  E-value=7.7e-07  Score=87.55  Aligned_cols=141  Identities=15%  Similarity=0.121  Sum_probs=80.0

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|-.+.+|++...... .+..+.+..+++|++-.....                           .....+|+++|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~-~~~~~~~~~~vlR~~g~~~~~---------------------------~~~~~rE~~vl  107 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHL-PSVGEEPREVLLRLYGAILQG---------------------------VDSLVLESVMF  107 (379)
T ss_dssp             EEC-----CCEEEEECCTTS-CCCSSCCSEEEEEECC---CC---------------------------HHHHHHHHHHH
T ss_pred             EEcCCcccccEEEEEeCCCc-cccCCCCCeEEEEECCCccch---------------------------HHHHHHHHHHH
Confidence            57888888999999862100 000011578999997431000                           00123799999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccCccccccc------------------ccccCC--C----C--HHHHHHHHHHHH
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAA------------------KLKDTP--L----T--ESGACKLYRECV  174 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~------------------~L~~~~--l----~--~~~~~~l~~qll  174 (351)
                      ..|...|+ .|+++......+||||+.  |.++.                  .|....  +    .  ..++..++.++-
T Consensus       108 ~~L~~~gv-~P~ll~~~~~g~v~e~i~--G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~  184 (379)
T 3feg_A          108 AILAERSL-GPQLYGVFPEGRLEQYIP--SRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQ  184 (379)
T ss_dssp             HHHHHTTS-SCCEEEEETTEEEEECCS--EEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCC-CCeEEEEcCCccEEEEec--CccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHH
Confidence            99999998 599987766679999994  53321                  111111  1    1  123333332221


Q ss_pred             H-------------------HHHHHH-------hhCCccccCCCCCceEEeC-----CeEEEEEccccc
Q psy10135        175 V-------------------MMWRLY-------NKCHLVHADLSEYNMLVHK-----ATLFIIDVAQSV  212 (351)
Q Consensus       175 ~-------------------~L~~LH-------~~~glVH~DLkp~NILi~~-----g~l~IIDFG~Av  212 (351)
                      .                   .+..|.       ....++|+|+.+.|||+.+     +.+.||||..|.
T Consensus       185 ~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          185 DLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             hccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            1                   112221       1236999999999999964     489999999884

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=98.37  E-value=1.4e-06  Score=86.65  Aligned_cols=77  Identities=13%  Similarity=0.046  Sum_probs=51.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|-.+.||++.. .+........+..+++|++.... ..                      ..+     ..|+.+|
T Consensus        79 ~~l~gG~tN~~y~v~~-~~~~~~~~~~~~~~vlRi~~~~~-~~----------------------~~l-----i~E~~~l  129 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRL-SEVYPPIRNEPNKVLLRVYFNPE-TE----------------------SHL-----VAESVIF  129 (429)
T ss_dssp             EEECCCTTEEEEEEEE-CTTSCCSSSCCSEEEEEEECSCC-CH----------------------HHH-----HHHHHHH
T ss_pred             EEeCCCcccceEEEEe-CCCccccCCCCceEEEEEeCCCC-cH----------------------HHH-----HHHHHHH
Confidence            5788899999999986 21000000014789999984310 00                      011     1589999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ..|...|+ +|+++......+||||+.
T Consensus       130 ~~L~~~g~-~P~l~~~~~~g~v~e~l~  155 (429)
T 1nw1_A          130 TLLSERHL-GPKLYGIFSGGRLEEYIP  155 (429)
T ss_dssp             HHHHHTTS-SSCEEEEETTEEEECCCC
T ss_pred             HHHHhCCC-CCcEEEEeCCCEEEEEeC
Confidence            99999997 698887655679999994

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=98.32  E-value=1.2e-06  Score=88.27  Aligned_cols=71  Identities=13%  Similarity=0.229  Sum_probs=50.1

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|-.+.+|++.....        +..+++|++......      .+.                     -..|+.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~--------~~~~vLRi~g~~~~~------~id---------------------R~~E~~vl  158 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSK--------QAKYLIRLYGPKTDE------IIN---------------------REREKKIS  158 (458)
T ss_dssp             EEECC--CEEEEEEEETTT--------TEEEEEEEECC-CCS------CSC---------------------HHHHHHHH
T ss_pred             EEcCCCeEeEEEEEEECCC--------CceEEEEECCCChhh------hcC---------------------HHHHHHHH
Confidence            5788899999999987222        478999998652111      110                     14699999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ..|...|+ .|+++......+||||+.
T Consensus       159 ~~L~~~gl-~P~ll~~~~~G~v~e~I~  184 (458)
T 2qg7_A          159 CILYNKNI-AKKIYVFFTNGRIEEFMD  184 (458)
T ss_dssp             HHHTTSSS-BCCEEEEETTEEEEECCC
T ss_pred             HHHHhcCC-CCCEEEEeCCeEEEEeeC
Confidence            99998887 688887666678999994

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=98.20  E-value=3.2e-06  Score=84.40  Aligned_cols=78  Identities=14%  Similarity=0.140  Sum_probs=53.5

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|..|-...+|++..... .......+..|++|++......+.+                           -++|++++
T Consensus        76 ~~lsGG~TN~~y~v~~~~~-~~~~~~~~~~~vlRi~g~~t~~~id---------------------------R~~E~~~l  127 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNE-SMSLSLKHPRILFRIYGKHVGKFYD---------------------------SKVELDVF  127 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC------CCCSEEEEEECCCCC-CCCC---------------------------HHHHHHHH
T ss_pred             EEcCCCcccceEEEEeCCC-cccccCCCCeEEEEECCCCcchhcC---------------------------HHHHHHHH
Confidence            5778888999999987211 0000001478999998653211111                           14699999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccC
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ..|...|+ +|+++.....++||+|+.
T Consensus       128 ~~L~~~gi-~P~l~~~~~~~~I~efI~  153 (424)
T 3mes_A          128 RYLSNINI-APNIIADFPEGRIEEFID  153 (424)
T ss_dssp             HHHHHTTS-SCCEEEEETTEEEEECCC
T ss_pred             HHHHhcCC-CCCEEEEcCCCEEEEEeC
Confidence            99999998 899998777899999994

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=97.68  E-value=0.00011  Score=71.91  Aligned_cols=122  Identities=14%  Similarity=0.097  Sum_probs=60.3

Q ss_pred             hhhCChhHHHHHHHHHh---cCc---e--eee-cceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhc
Q psy10135         16 EQVMDPRTRMILFKLIS---RGM---V--SEV-NGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDR   86 (351)
Q Consensus        16 ~~v~d~rt~~~L~~l~~---~g~---~--y~I-~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~   86 (351)
                      ++.=+|+++.....+..   .|.   +  ..| ...|+-|-...+|++.. .+........+..|+++++-.....+.++
T Consensus        24 ~~~~~~~~~~~a~~~c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~-~~~~~~~~~~~~~~llRi~g~~~~~~~~r  102 (401)
T 3g15_A           24 DEQPEPRTRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSL-PDTTATLGDEPRKVLLRLYGAILQMRSCN  102 (401)
T ss_dssp             -CCCCHHHHHHHHHHHHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEEC-CTTCCCSSSCCSEEEEEEEEC--------
T ss_pred             CCCCCchHHHHHHHHHHHhCCccccCCCcCCEEEEEeCCccccceEEEEE-CCCCcccccCCCeEEEEeCCCCccchhhh
Confidence            34446777776544432   221   1  122 36788888889999986 32000000124679999997654333222


Q ss_pred             cccccccccccccccCCChhHHHHHHHHHHHHHHHHhhhCCCCccccccccceEEEEcccC
Q psy10135         87 DKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIG  147 (351)
Q Consensus        87 ~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig  147 (351)
                      ..-.  +.+.+.      .......-...|..++..+...|+ .|+.+....+.++++|+.
T Consensus       103 ~~~~--~~~~~~------~~~~~~~~~~~e~~~~~~ls~~g~-~p~l~~~f~~g~i~e~i~  154 (401)
T 3g15_A          103 KEGS--EQAQKE------NEFQGAEAMVLESVMFAILAERSL-GPKLYGIFPQGRLEQFIP  154 (401)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHTTS-SCCEEEEETTEEEEECCC
T ss_pred             hHHH--HHHHHH------HhccCCCCCcchhHHHHHHHhCCC-CCEEEEEECCcEEEEecC
Confidence            1100  000000      000001112357777888888776 577777767789999994

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=82.90  E-value=11  Score=36.30  Aligned_cols=76  Identities=20%  Similarity=0.168  Sum_probs=39.1

Q ss_pred             ceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHH--HHHHH-hhCCc--cc-cCCCCCceEEe--CCeEEEEEcc
Q psy10135        138 SHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVM--MWRLY-NKCHL--VH-ADLSEYNMLVH--KATLFIIDVA  209 (351)
Q Consensus       138 ~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~--L~~LH-~~~gl--VH-~DLkp~NILi~--~g~l~IIDFG  209 (351)
                      ...++|+|+  .|.++..+........-..+...++...  +..+. ...++  +. .--.|+|||+.  ++.+++||-+
T Consensus       156 ~~~l~meyv--~G~~L~e~~~~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn  233 (342)
T 1cja_A          156 ANILLMELV--RGITLNKLTTTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK  233 (342)
T ss_dssp             SEEEEEECC--CEEESTTCCSSSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred             cceehhhhc--CCCccccchhhhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence            456999999  4766544433211110012223333222  22222 11122  11 12589999994  4569999999


Q ss_pred             ccccCC
Q psy10135        210 QSVEHD  215 (351)
Q Consensus       210 ~Av~~~  215 (351)
                      +|..-+
T Consensus       234 ~af~~~  239 (342)
T 1cja_A          234 IIPLDA  239 (342)
T ss_dssp             CCCCCS
T ss_pred             ccccCC
Confidence            996543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	351
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-21

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 88.7 bits (219), Expect = 2e-21
 Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)

Query: 36  VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD-RDKYVNGEF 94
           V  +   +  GKE+ V++            E   E  +K  K     FK  ++K   G+ 
Sbjct: 1   VDAIGKLMGEGKESAVFNCY---------SEKFGECVVKFHKVGHTSFKKVKEKRDYGDL 51

Query: 95  RFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAA 154
            F           +    A  E R L ++   GL VPK    + + +LM  I        
Sbjct: 52  HFS---------VLAIRSARNEFRALQKLQ--GLAVPKVYAWEGNAVLMELIDAKEL--- 97

Query: 155 KLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEH 214
                 +      ++    +  + + Y+   +VH DLS+YN+LV +  ++IID  QSVE 
Sbjct: 98  ----YRVRVENPDEVLDMILEEVAKFYH-RGIVHGDLSQYNVLVSEEGIWIIDFPQSVEV 152

Query: 215 DHPHALQFLRKDCDNVTVF 233
                 + L +D  N+  +
Sbjct: 153 GEEGWREILERDVRNIITY 171

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	351
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.9
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.89
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.89
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.89
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.89
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.89
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.89
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.89
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.89
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.88
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.88
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.88
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.88
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.88
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.88
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.88
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.88
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.88
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.88
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.88
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.87
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.87
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.86
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.86
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.86
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.86
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.86
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.85
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.85
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.85
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.85
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.85
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.85
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.85
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.84
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.84
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.84
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.83
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.83
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.83
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.83
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.81
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.81
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.81
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.81
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.8
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.79
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.79
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.78
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.78
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.78
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	99.26
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	99.11
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.08
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	99.04
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.72
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	98.26

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=7.6e-35  Score=257.43  Aligned_cols=189  Identities=23%  Similarity=0.322  Sum_probs=148.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +|.|++.||+|+||.||+|.+ .+        |+.||||+++.+...|+....+..        +.......+.+.++.+
T Consensus         1 ~~~vg~~IG~G~~g~Vy~a~~-~~--------g~~vAvKi~r~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~   63 (191)
T d1zara2           1 VDAIGKLMGEGKESAVFNCYS-EK--------FGECVVKFHKVGHTSFKKVKEKRD--------YGDLHFSVLAIRSARN   63 (191)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TT--------TEEEEEEEECC------CCCC---------------CHHHHHHHHHHH
T ss_pred             CchhCCEeeeCcceEEEEEEC-CC--------CCEEEEEEEecccchhhhhhhhhh--------hccHHHHHHHHHHHHH
Confidence            478999999999999999998 66        899999999988776655333221        0112234567788899


Q ss_pred             HHHHHHHhhhCCCCccccccccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYN  195 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~N  195 (351)
                      |+++|.++..  +++|.++....++|||||++  |.+...     ++...+..++.|++.++.+|| ++|||||||||+|
T Consensus        64 e~~~l~~l~~--~~v~~~~~~~~~~lvme~~~--~~~~~~-----l~~~~~~~i~~ql~~~l~~lH-~~giiHrDiKP~N  133 (191)
T d1zara2          64 EFRALQKLQG--LAVPKVYAWEGNAVLMELID--AKELYR-----VRVENPDEVLDMILEEVAKFY-HRGIVHGDLSQYN  133 (191)
T ss_dssp             HHHHHHHTTT--SSSCCEEEEETTEEEEECCC--CEEGGG-----CCCSCHHHHHHHHHHHHHHHH-HTTEECSCCSTTS
T ss_pred             HHHHHHHccC--CCcceEEEecCCEEEEEeec--cccccc-----hhhHHHHHHHHHHHHHHHHHh-hCCEEEccCChhh
Confidence            9999999974  56888888888899999995  543333     333456789999999999999 5999999999999


Q ss_pred             eEEeCCeEEEEEccccccCCCCChHHHHHhhhhhhhhccccCCCCC-cHHHHHHhhh
Q psy10135        196 MLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSD-DDEKIFKKWD  251 (351)
Q Consensus       196 ILi~~g~l~IIDFG~Av~~~~p~a~~fl~~D~~~v~~ff~~~~~~~-~~~~~~~~~~  251 (351)
                      ||++++.++|||||+|+..+||++.++|.||+.++..||...++.. |+..+++.+.
T Consensus       134 ILv~~~~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         134 VLVSEEGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             EEEETTEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred             eeeeCCCEEEEECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHh
Confidence            9999999999999999999999999999999999999996655554 4777776653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-24  Score=204.14  Aligned_cols=143  Identities=17%  Similarity=0.231  Sum_probs=111.5

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++.....                     .     .-...+
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~--------~~~vAvK~~~~~~~~---------------------~-----~~~~~~   66 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVAT--------GQEVAIRQMNLQQQP---------------------K-----KELIIN   66 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTT--------CCEEEEEEEEGGGCS---------------------C-----HHHHHH
T ss_pred             ccEEEEEEecCcCcEEEEEEECCC--------CCEEEEEEEecccCh---------------------H-----HHHHHH
Confidence            499999999999999999998777        999999998752100                     0     012357


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      |+.+|++|.+.+| .+-..+.. ...+|||||+. +|.....+....+++.+++.++.||+.+|.+|| .+|||||||||
T Consensus        67 E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~-gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH-~~~iiHrDiKp  144 (293)
T d1yhwa1          67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA-GGSLTDVVTETCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKS  144 (293)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT-TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC-CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCcH
Confidence            9999999987653 22222222 44579999995 344433344567999999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||+. +|.++|+|||+|...
T Consensus       145 ~NILl~~~~~vkl~DFG~a~~~  166 (293)
T d1yhwa1         145 DNILLGMDGSVKLTDFGFCAQI  166 (293)
T ss_dssp             GGEEECTTCCEEECCCTTCEEC
T ss_pred             HHeEECCCCcEeeccchhheee
Confidence            999995 689999999999754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.1e-24  Score=199.30  Aligned_cols=143  Identities=16%  Similarity=0.168  Sum_probs=110.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....  .+   .                    .....+|
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~--------~~~vAiK~i~~~~~--~~---~--------------------~~~~~~E   53 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNRVT--------EEAVAVKIVDMKRA--VD---C--------------------PENIKKE   53 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECC--------------------------------CHHHH
T ss_pred             eEEEEEEecCcCeEEEEEEECCC--------CCEEEEEEEehhhc--ch---H--------------------HHHHHHH
Confidence            89999999999999999999777        99999999875321  00   0                    0113579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|++|.+.+| ..-..+.. ...+|||||+. .|.....+.. ..+++.+++.++.||+.+|.+|| .+|||||||||
T Consensus        54 i~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~-gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH-~~~IiHrDiKp  131 (271)
T d1nvra_          54 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCS-GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKP  131 (271)
T ss_dssp             HHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT-TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCG
T ss_pred             HHHHHhCCCCCEeeEeeeeccCceeEEEEeccC-CCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HcCCccCcccH
Confidence            999999977653 22222222 34579999995 4555555544 46899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||+. ++.++|+|||.|...
T Consensus       132 ~NILl~~~~~~KL~DFG~a~~~  153 (271)
T d1nvra_         132 ENLLLDERDNLKISDFGLATVF  153 (271)
T ss_dssp             GGEEECTTCCEEECCCTTCEEC
T ss_pred             HHEEECCCCCEEEccchhheee
Confidence            999995 689999999999743

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.2e-24  Score=199.08  Aligned_cols=146  Identities=18%  Similarity=0.151  Sum_probs=111.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.......                       .......+|
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~--------~~~vAiK~i~~~~~~~~-----------------------~~~~~~~~E   56 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQS--------KFILALKVLFKAQLEKA-----------------------GVEHQLRRE   56 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHHT-----------------------TCHHHHHHH
T ss_pred             eEEEEEEecCCCcEEEEEEECCC--------CcEEEEEEEchHHccCh-----------------------HHHHHHHHH
Confidence            89999999999999999999667        99999999875321100                       011224579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|.+|.+.+| .+-..+.. ...+|||||+. .|.....+. ...+++.++..++.||+.+|.+|| +.|||||||||
T Consensus        57 ~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~-~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH-~~~ivHrDiKp  134 (263)
T d2j4za1          57 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYRELQKLSKFDEQRTATYITELANALSYCH-SKRVIHRDIKP  134 (263)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCG
T ss_pred             HHHHHhcCCCCCCeEEEEEEECCEEEEEEeecC-CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeeeecc
Confidence            999999977653 22222222 34579999995 444444443 356899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      +|||+. ++.++|+|||.|....
T Consensus       135 ~Nill~~~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1         135 ENLLLGSAGELKIADFGWSVHAP  157 (263)
T ss_dssp             GGEEECTTSCEEECCCCSCSCCC
T ss_pred             ccceecCCCCEeecccceeeecC
Confidence            999995 6899999999997654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.2e-24  Score=205.05  Aligned_cols=143  Identities=18%  Similarity=0.167  Sum_probs=110.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....   .                      ..+....+|
T Consensus         8 y~~~~~iG~G~fg~V~~~~~~~~--------~~~vAiK~i~~~~~---~----------------------~~~~~~~~E   54 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSHKPS--------GLVMARKLIHLEIK---P----------------------AIRNQIIRE   54 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTT--------TEEEEEEEEECCCC---T----------------------THHHHHHHH
T ss_pred             CEEEEEEecCCCeEEEEEEECCC--------CcEEEEEEEChhhC---H----------------------HHHHHHHHH
Confidence            89999999999999999999677        99999999875310   0                      011234579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|++|.+.+| ..-..+.. ...+|||||+. +|.....+. ...+++..++.++.||+.+|.+||+++|||||||||
T Consensus        55 i~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~-gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP  133 (322)
T d1s9ja_          55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMD-GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP  133 (322)
T ss_dssp             GGGGGGCCCTTBCCEEEEEECSSEEEEEEECCT-TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSG
T ss_pred             HHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC-CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCH
Confidence            999998876653 22222222 34589999995 344433343 346899999999999999999999657999999999


Q ss_pred             CceEEe-CCeEEEEEcccccc
Q psy10135        194 YNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~  213 (351)
                      +|||+. +|.++|+|||.|..
T Consensus       134 ~NILl~~~~~vkl~DFGla~~  154 (322)
T d1s9ja_         134 SNILVNSRGEIKLCDFGVSGQ  154 (322)
T ss_dssp             GGEEECTTCCEEECCCCCCHH
T ss_pred             HHeeECCCCCEEEeeCCCccc
Confidence            999995 68999999999964

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.89  E-value=1.5e-23  Score=202.39  Aligned_cols=142  Identities=15%  Similarity=0.222  Sum_probs=110.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++....                          ..+..+.+|
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~~~~--------~~~vAiK~i~~~~~--------------------------~~~~~~~~E   76 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVEKAT--------GRVFVAKFINTPYP--------------------------LDKYTVKNE   76 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECCSH--------------------------HHHHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEECCcch--------------------------hHHHHHHHH
Confidence            99999999999999999998777        99999999875321                          011234579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.+|.+.+| .+-..+.. ...+|||||+. +|.+...+..  .++++.+++.++.||+.+|.+|| ++||||||||
T Consensus        77 i~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~-gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH-~~~iiHRDiK  154 (352)
T d1koba_          77 ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS-GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDIK  154 (352)
T ss_dssp             HHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC-CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCC
T ss_pred             HHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCeeecccc
Confidence            999999977653 22222222 44579999995 3444333332  35899999999999999999999 5999999999


Q ss_pred             CCceEEe---CCeEEEEEccccccC
Q psy10135        193 EYNMLVH---KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~---~g~l~IIDFG~Av~~  214 (351)
                      |.|||+.   ++.++|+|||+|...
T Consensus       155 p~NILl~~~~~~~vkL~DFGla~~~  179 (352)
T d1koba_         155 PENIMCETKKASSVKIIDFGLATKL  179 (352)
T ss_dssp             GGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             cccccccccCCCeEEEeecccceec
Confidence            9999995   478999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.89  E-value=2e-23  Score=194.97  Aligned_cols=151  Identities=19%  Similarity=0.200  Sum_probs=114.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-...                 ...+..+..+.+|
T Consensus         5 y~~~~~iG~G~~g~V~~~~~~~~--------~~~~AvK~i~~~~~~~~~~-----------------~~~~~~~~~~~~E   59 (277)
T d1phka_           5 YEPKEILGRGVSSVVRRCIHKPT--------CKEYAVKIIDVTGGGSFSA-----------------EEVQELREATLKE   59 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEEETTCSTTCCH-----------------HHHHHHHHHHHHH
T ss_pred             CEEceEEecCcCeEEEEEEECCC--------CCEEEEEEEecccccchhH-----------------HHHHHHHHHHHHH
Confidence            89999999999999999998667        9999999998642110000                 0012334456789


Q ss_pred             HHHHHHhh-hCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.+|. +.+| ..-..+.. ...+|||||+. .|.....++ ...+++.+++.++.||+.+|.+|| .+||||||||
T Consensus        60 ~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH-~~~ivHrDlk  137 (277)
T d1phka_          60 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK-KGELFDYLTEKVTLSEKETRKIMRALLEVICALH-KLNIVHRDLK  137 (277)
T ss_dssp             HHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCS
T ss_pred             HHHHHHhcCCCCeEEEEeecccCcceEEEEEcCC-CchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HcCCcccccc
Confidence            99999997 5442 33333333 34589999995 444444443 357899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       138 p~Nill~~~~~~kl~DFG~a~~~  160 (277)
T d1phka_         138 PENILLDDDMNIKLTDFGFSCQL  160 (277)
T ss_dssp             GGGEEECTTCCEEECCCTTCEEC
T ss_pred             cceEEEcCCCCeEEccchheeEc
Confidence            9999995 689999999999754

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.7e-24  Score=199.46  Aligned_cols=145  Identities=16%  Similarity=0.159  Sum_probs=110.6

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-..                       ......+|
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~--------~~~vAvK~i~~~~~~~~~-----------------------~~~~~~~E   58 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELAT--------SREYAIKILEKRHIIKEN-----------------------KVPYVTRE   58 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHHTT-----------------------CHHHHHHH
T ss_pred             CEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEehHHccCHH-----------------------HHHHHHHH
Confidence            99999999999999999999667        999999998753211000                       01124579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|++|.+.+| .+-..+.. ...+|||||+. +|.....+. ...+++.+++.++.||+.+|.+|| ++|||||||||
T Consensus        59 ~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~-gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH-~~~iiHrDiKp  136 (288)
T d1uu3a_          59 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-GKGIIHRDLKP  136 (288)
T ss_dssp             HHHHHHCCSTTBCCEEEEEECSSEEEEEECCCT-TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSG
T ss_pred             HHHHHHcCCCCeeEEEEEEEECCEEEEEEEccC-CCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhc-cccEEcCcCCc
Confidence            999999987663 22222222 44589999995 344333333 356899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||++ ++.++|+|||.|...
T Consensus       137 ~NIll~~~~~vkl~DFG~a~~~  158 (288)
T d1uu3a_         137 ENILLNEDMHIQITDFGTAKVL  158 (288)
T ss_dssp             GGEEECTTSCEEECCCTTCEEC
T ss_pred             cccccCCCceEEecccccceec
Confidence            999995 689999999999754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.7e-23  Score=196.47  Aligned_cols=142  Identities=20%  Similarity=0.225  Sum_probs=109.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++.....  .    +   .+                 ..+
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~--------~~~vAvK~i~~~~~~--~----~---~~-----------------~~~   58 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKET--------SVLAAAKVIDTKSEE--E----L---ED-----------------YMV   58 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECSSSG--G----G---GG-----------------THH
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCC--------CeEEEEEEECcCCHH--H----H---HH-----------------HHH
Confidence            599999999999999999999667        999999999763210  0    0   01                 246


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+.+|.+|.+.+| .+-..+.. ...+|||||+. .|.....+.  ...+++.++..++.||+.+|.+|| .+|||||||
T Consensus        59 E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~-~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH-~~~ivHrDi  136 (288)
T d2jfla1          59 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCA-GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH-DNKIIHRDL  136 (288)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT-TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCEEEeec
Confidence            8999999977653 22222222 44579999995 343322222  346899999999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEcccccc
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      ||+|||+. ++.++|+|||.|..
T Consensus       137 Kp~NIll~~~~~~Kl~DFG~a~~  159 (288)
T d2jfla1         137 KAGNILFTLDGDIKLADFGVSAK  159 (288)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEE
T ss_pred             ChhheeECCCCCEEEEechhhhc
Confidence            99999995 68999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1.2e-23  Score=199.59  Aligned_cols=146  Identities=18%  Similarity=0.106  Sum_probs=111.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++......                       ........+
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~--------~~~vAvK~i~~~~~~~-----------------------~~~~~~~~~   64 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRN--------SEVVAIKKMSYSGKQS-----------------------NEKWQDIIK   64 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTT--------TEEEEEEEEECCSSCH-----------------------HHHHHHHHH
T ss_pred             hcEeeEEEecCCCeEEEEEEECCC--------CcEEEEEEEchhhccC-----------------------HHHHHHHHH
Confidence            589999999999999999998667        9999999987532110                       011122457


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccc-ccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAA-KLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~-~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|.+|.+.+| .+-..+.. ...+|||||+. .|.... .....++++.++..++.||+.+|.+|| .+||||||||
T Consensus        65 Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~-~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH-~~~iiHrDiK  142 (309)
T d1u5ra_          65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVK  142 (309)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCS
T ss_pred             HHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecC-CCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hCCEeccCCC
Confidence            9999999977653 33223222 44579999995 332221 123457899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       143 p~NILl~~~~~~Kl~DFG~a~~~  165 (309)
T d1u5ra_         143 AGNILLSEPGLVKLGDFGSASIM  165 (309)
T ss_dssp             GGGEEEETTTEEEECCCTTCBSS
T ss_pred             cceEEECCCCCEEEeeccccccc
Confidence            9999995 689999999999765

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.89  E-value=3.4e-23  Score=199.80  Aligned_cols=143  Identities=20%  Similarity=0.268  Sum_probs=111.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+..+        |+.||||+++.....                          ......+|
T Consensus        28 Y~i~~~lG~G~fg~Vy~~~~~~~--------g~~vAvK~i~~~~~~--------------------------~~~~~~~E   73 (350)
T d1koaa2          28 YDIHEELGTGAFGVVHRVTERAT--------GNNFAAKFVMTPHES--------------------------DKETVRKE   73 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTT--------TEEEEEEEECCCSHH--------------------------HHHHHHHH
T ss_pred             eEEEEEEecCcCeEEEEEEECCC--------CCEEEEEEEcccchh--------------------------hHHHHHHH
Confidence            99999999999999999999667        999999998753210                          01224579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.+|.+.+| .+-..+.. ...+|||||+. +|.+...+..  ..+++.++..++.||+.+|.+|| .+||||||||
T Consensus        74 ~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~-gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH-~~~iiHrDiK  151 (350)
T d1koaa2          74 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS-GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLK  151 (350)
T ss_dssp             HHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC-SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCC
T ss_pred             HHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-hcCCeeeeec
Confidence            999999977653 22222222 45679999995 4554444532  35899999999999999999999 5999999999


Q ss_pred             CCceEEe---CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH---KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~---~g~l~IIDFG~Av~~~  215 (351)
                      |+|||+.   ++.++|+|||+|...+
T Consensus       152 p~NIll~~~~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2         152 PENIMFTTKRSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             GGGEEESSTTSCCEEECCCTTCEECC
T ss_pred             hhHeeeccCCCCeEEEeecchheecc
Confidence            9999994   4789999999997653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=5.6e-23  Score=190.59  Aligned_cols=226  Identities=12%  Similarity=0.126  Sum_probs=143.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+..+        |+.||||+++.....                     ++  .......+|
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~--------~~~vAiK~i~~~~~~---------------------~~--~~~~~~~~E   57 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRL--------HRDVAVKVLRADLAR---------------------DP--SFYLRFRRE   57 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECSTTTT---------------------CH--HHHHHHHHH
T ss_pred             eEEeEEEeeCCCeEEEEEEECCC--------CCEEEEEEEchhhcc---------------------CH--HHHHHHHHH
Confidence            89999999999999999998667        999999999763210                     00  112235679


Q ss_pred             HHHHHHhhhCCC-Ccccccccc-----ceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLK-----SHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~-----~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +.+|+++.+.+| .+-..+...     ..+|||||+. +|.....+. ...+++.++..++.||+.+|.+|| ++|||||
T Consensus        58 ~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~-g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH-~~~iiHr  135 (277)
T d1o6ya_          58 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH-QNGIIHR  135 (277)
T ss_dssp             HHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCC-EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECC
T ss_pred             HHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCC-CCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHH-hCCccCc
Confidence            999999887663 222222211     2579999995 233222332 346899999999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCC----------------CCChHHHHHhh-hhhhhhcc-----------ccCCCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHD----------------HPHALQFLRKD-CDNVTVFV-----------ILNPVS  240 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~----------------~p~a~~fl~~D-~~~v~~ff-----------~~~~~~  240 (351)
                      ||||+|||+. ++.++|+|||.+....                ...|.|.++.. ...-.|.|           ...|--
T Consensus       136 DiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  215 (277)
T d1o6ya_         136 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT  215 (277)
T ss_dssp             CCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCC
Confidence            9999999995 6899999999875432                12344554322 11222332           111111


Q ss_pred             C-cHHHHHHhhhhcCCCCccccc-ccccchhHHHHHHhcCCCCCCcchhhhhhhhccccC
Q psy10135        241 D-DDEKIFKKWDSDYVTSSDEDE-ENVVDFERDINLIKSGQGSSNTLIYQNIVGLNADLS  298 (351)
Q Consensus       241 ~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~d~~~~~~~~~~~~~~~y~~~~~~~~~~~  298 (351)
                      . ...+.+.........+..... .....+..=+.+|-+.+   ++-+|+++..|..||.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~d---p~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         216 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN---PENRYQTAAEMRADLV  272 (277)
T ss_dssp             CSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSS---GGGSCSSHHHHHHHHH
T ss_pred             CcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCC---HhHCHhHHHHHHHHHH
Confidence            1 122233222222222222222 22233555667777665   6678888888888774

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-23  Score=201.26  Aligned_cols=145  Identities=19%  Similarity=0.163  Sum_probs=110.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-..                   .    .....+|
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~--------~~~~AiK~i~k~~~~~~~-------------------~----~~~~~~E   55 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKAT--------GRYYAMKILRKEVIIAKD-------------------E----VAHTVTE   55 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEHHHHHHTT-------------------C----HHHHHHH
T ss_pred             cEEEEEEecCcCeEEEEEEECCC--------CCEEEEEEEchhhccCHH-------------------H----HHHHHHH
Confidence            89999999999999999999777        999999999753211110                   0    0113468


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ..+|.++.+.+| ..-..+.. ...+|||||+. +|.....+.. ..+++..++.++.||+.+|.+|| +.|||||||||
T Consensus        56 ~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~-gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH-~~~iiHRDlKP  133 (337)
T d1o6la_          56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN-GGELFFHLSRERVFTEERARFYGAEIVSALEYLH-SRDVVYRDIKL  133 (337)
T ss_dssp             HHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCG
T ss_pred             HHHHHhCCCCCEEEEEeeeccccccccceeccC-CCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhh-hcCccccccCH
Confidence            899999877653 22222222 34579999996 4544444433 56888999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||++ +|.++|+|||.|...
T Consensus       134 ~NILl~~~g~vkl~DFG~a~~~  155 (337)
T d1o6la_         134 ENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             GGEEECTTSCEEECCCTTCBCS
T ss_pred             HHeEecCCCCEEEeeccccccc
Confidence            999995 689999999999754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=1.7e-23  Score=199.07  Aligned_cols=156  Identities=17%  Similarity=0.125  Sum_probs=115.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....-.   ..                    .....+|
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~--------g~~vAvK~i~~~~~~~~---~~--------------------~~~~~~E   54 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHN--------GRYYAMKVLKKEIVVRL---KQ--------------------VEHTNDE   54 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHHT---TC--------------------HHHHHHH
T ss_pred             eEEEEEEecCcCcEEEEEEECCC--------CCEEEEEEEchHHccCH---HH--------------------HHHHHHH
Confidence            89999999999999999999777        99999999975321100   00                    1123578


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      ...|.+|.+.+| .+-..+.. ...++||||+. +|.....+. ...++...++.++.||+.+|.+|| +.|||||||||
T Consensus        55 ~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~-gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~iiHrDiKp  132 (316)
T d1fota_          55 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE-GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH-SKDIIYRDLKP  132 (316)
T ss_dssp             HHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCG
T ss_pred             HHHHHhccCcChhheeeeEeeCCeeeeEeeecC-CccccccccccccccccHHHHHHHHHHHhhhhhc-cCcEEccccCc
Confidence            999999977663 22222222 44589999995 343322232 345788888899999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC----------CCChHHHHHh
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD----------HPHALQFLRK  225 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~----------~p~a~~fl~~  225 (351)
                      +|||++ +|.++|+|||.|....          ..+|.|.+..
T Consensus       133 ~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~  175 (316)
T d1fota_         133 ENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVST  175 (316)
T ss_dssp             GGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTT
T ss_pred             hheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcC
Confidence            999995 6899999999997652          2446777654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.9e-23  Score=196.05  Aligned_cols=141  Identities=15%  Similarity=0.158  Sum_probs=111.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+..+        |+.||||+++....                           -+....+|
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~--------~~~~AiK~i~~~~~---------------------------~~~~~~~E   51 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSS--------KKTYMAKFVKVKGT---------------------------DQVLVKKE   51 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECCCTH---------------------------HHHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEECCC--------CcEEEEEEEcCCcc---------------------------cHHHHHHH
Confidence            89999999999999999999667        99999999975311                           01124579


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.++.+.+| .+-..+.. ...+|||||+. +|.+...+..  ..+++.++..++.||+.+|.+|| ..||||||||
T Consensus        52 i~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~-gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH-~~~iiHrDlK  129 (321)
T d1tkia_          52 ISILNIARHRNILHLHESFESMEELVMIFEFIS-GLDIFERINTSAFELNEREIVSYVHQVCEALQFLH-SHNIGHFDIR  129 (321)
T ss_dssp             HHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC-CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCC
T ss_pred             HHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC-CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HcCCCccccc
Confidence            999999987663 33333332 45689999995 4555555543  25899999999999999999999 5999999999


Q ss_pred             CCceEEeC---CeEEEEEccccccC
Q psy10135        193 EYNMLVHK---ATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~~---g~l~IIDFG~Av~~  214 (351)
                      |+|||+..   ..++|+|||.|...
T Consensus       130 p~NIll~~~~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_         130 PENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             GGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             ccceeecCCCceEEEEcccchhhcc
Confidence            99999952   47999999999765

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.8e-23  Score=190.66  Aligned_cols=151  Identities=17%  Similarity=0.174  Sum_probs=108.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|+|.+.||+|+||.||+|.+..+        |+.||||+++.....-...   .....++                 .+
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~--------~~~vAvK~i~~~~~~~~~~---~~~~~~~-----------------~~   56 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSD--------NLPVAIKHVEKDRISDWGE---LPNGTRV-----------------PM   56 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEEGGGCCCEEE---CTTCCEE-----------------EH
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCC--------CCEEEEEEEehHHccchhh---hhHHHHH-----------------HH
Confidence            389999999999999999999777        9999999987532111000   0000112                 25


Q ss_pred             HHHHHHHhhh--CC-CCccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        116 EMRNLTRMYS--EG-LNVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       116 E~~nL~rL~~--~g-i~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      |+.+|+++..  .+ +.+-..+.. ...++||||+.+.+.....+. ...+++.+++.++.||+.+|.+|| .+||||||
T Consensus        57 E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH-~~~iiHrD  135 (273)
T d1xwsa_          57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCGVLHRD  135 (273)
T ss_dssp             HHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECSC
T ss_pred             HHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccc
Confidence            8899998863  22 222222222 455899999952333333332 356899999999999999999999 59999999


Q ss_pred             CCCCceEEe-C-CeEEEEEccccccCC
Q psy10135        191 LSEYNMLVH-K-ATLFIIDVAQSVEHD  215 (351)
Q Consensus       191 Lkp~NILi~-~-g~l~IIDFG~Av~~~  215 (351)
                      |||+|||++ + +.++|+|||.|....
T Consensus       136 iKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_         136 IKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             CSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             CcccceEEecCCCeEEECccccceecc
Confidence            999999996 4 689999999997543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.3e-23  Score=191.65  Aligned_cols=149  Identities=17%  Similarity=0.209  Sum_probs=111.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.+.||+|+||.||+|.+..+        |+.||||+++.........                    ........+
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~--------~~~~AvK~i~~~~~~~~~~--------------------~~~~~~~~~   62 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKST--------GLQYAAKFIKKRRTKSSRR--------------------GVSREDIER   62 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEBCSSTTCSS--------------------SBCHHHHHH
T ss_pred             CEEEeEEEecCCCeEEEEEEECCC--------CCEEEEEEEEhhhcchhhh--------------------hHHHHHHHH
Confidence            399999999999999999999667        9999999997642211110                    011223467


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|++|.+.+| .+-..+.. ...+|||||+. +|.....+.. ..++..+++.++.||+.+|.+|| .+||||||||
T Consensus        63 E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~-gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH-~~~ivHrDiK  140 (293)
T d1jksa_          63 EVSILKEIQHPNVITLHEVYENKTDVILILELVA-GGELFDFLAEKESLTEEEATEFLKQILNGVYYLH-SLQIAHFDLK  140 (293)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCS
T ss_pred             HHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC-CccccchhccccccchhHHHHHHHHHHHHHHhhh-hcceeecccc
Confidence            9999999987653 22222222 44579999995 3444444433 46999999999999999999999 5999999999


Q ss_pred             CCceEEeC-C----eEEEEEccccccC
Q psy10135        193 EYNMLVHK-A----TLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~~-g----~l~IIDFG~Av~~  214 (351)
                      |.|||+.. +    .++|+|||.|...
T Consensus       141 p~Nill~~~~~~~~~vkl~DfG~a~~~  167 (293)
T d1jksa_         141 PENIMLLDRNVPKPRIKIIDFGLAHKI  167 (293)
T ss_dssp             GGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             cceEEEecCCCcccceEecchhhhhhc
Confidence            99999943 3    5999999999755

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.2e-23  Score=193.27  Aligned_cols=144  Identities=19%  Similarity=0.157  Sum_probs=103.8

Q ss_pred             ecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHH
Q psy10135         39 VNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMR  118 (351)
Q Consensus        39 I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~  118 (351)
                      ..+.||+|+||.||+|.+..+        |+.||||+++........ .                    .....+.+|+.
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~--------~~~vAvK~i~~~~~~~~~-~--------------------~~~~~~~~Ei~   52 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNT--------NQIVAIKKIKLGHRSEAK-D--------------------GINRTALREIK   52 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSC--------CSEEEEEEC---------------------------------CTHHHHHHH
T ss_pred             cceEeccCcCeEEEEEEECCC--------CcEEEEEEEehhhhhhhh-H--------------------HHHHHHHHHHH
Confidence            457899999999999998667        999999998753211100 0                    00112457999


Q ss_pred             HHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC
Q psy10135        119 NLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY  194 (351)
Q Consensus       119 nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~  194 (351)
                      +|.+|.+.+| ..-..+.. ...+|||||+.  |..+..+.  ...+++.++..++.||+.+|.+|| .+|||||||||+
T Consensus        53 il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~--~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH-~~~iiHrDiKp~  129 (299)
T d1ua2a_          53 LLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH-QHWILHRDLKPN  129 (299)
T ss_dssp             HHHHCCCTTBCCEEEEECCTTCCEEEEECCS--EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH-HTTCCCCCCCGG
T ss_pred             HHHhCCCCCEeEEEeeeccCCceeehhhhhc--chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhh-ccceecccCCcc
Confidence            9999977653 22222222 45689999995  43333333  245888899999999999999999 599999999999


Q ss_pred             ceEEe-CCeEEEEEccccccC
Q psy10135        195 NMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       195 NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||++ ++.++|+|||.|...
T Consensus       130 NIli~~~~~~KL~DFG~a~~~  150 (299)
T d1ua2a_         130 NLLLDENGVLKLADFGLAKSF  150 (299)
T ss_dssp             GEEECTTCCEEECCCGGGSTT
T ss_pred             eEEecCCCccccccCcccccc
Confidence            99995 589999999999654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.3e-23  Score=195.37  Aligned_cols=143  Identities=14%  Similarity=0.092  Sum_probs=107.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....    ...                    .....+|
T Consensus         4 Y~~~~~lG~G~fg~Vy~~~~~~~--------~~~vAvK~i~~~~~~----~~~--------------------~~~~~~E   51 (298)
T d1gz8a_           4 FQKVEKIGEGTYGVVYKARNKLT--------GEVVALKKIRLDTET----EGV--------------------PSTAIRE   51 (298)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEC-----------C--------------------CHHHHHH
T ss_pred             CEeccEEecCcCeEEEEEEECCC--------CCEEEEEEEehhhcC----hHH--------------------HHHHHHH
Confidence            88999999999999999999777        999999999753210    000                    0123569


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccc---ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKL---KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L---~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +.+|++|.+.+| .+-..+.. ...+|||||++  |.....+   ....+++.+++.++.||+.+|.+|| ++|||||||
T Consensus        52 i~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~--~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH-~~~IiHrDi  128 (298)
T d1gz8a_          52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-SHRVLHRDL  128 (298)
T ss_dssp             HHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS--EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhCCCCcEEEeccccccccceeEEEeecC--CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh-cCCEEcccc
Confidence            999999977653 22222222 34589999995  4322222   2245899999999999999999999 599999999


Q ss_pred             CCCceEE-eCCeEEEEEccccccC
Q psy10135        192 SEYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      ||+|||+ .++.++|+|||.|...
T Consensus       129 KpeNIl~~~~~~~kl~DFG~a~~~  152 (298)
T d1gz8a_         129 KPQNLLINTEGAIKLADFGLARAF  152 (298)
T ss_dssp             CGGGEEECTTSCEEECSTTHHHHH
T ss_pred             CchheeecccCcceeccCCcceec
Confidence            9999999 4689999999999644

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4e-23  Score=193.63  Aligned_cols=141  Identities=16%  Similarity=0.114  Sum_probs=109.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....                           .....+|
T Consensus        19 ~~~~~~iG~G~fg~Vy~a~~~~~--------~~~vAvK~i~~~~~~---------------------------~~~~~~E   63 (287)
T d1opja_          19 ITMKHKLGGGQYGEVYEGVWKKY--------SLTVAVKTLKEDTME---------------------------VEEFLKE   63 (287)
T ss_dssp             EEEEEETTTTTTSSEEEEEEGGG--------TEEEEEEECCTTCSC---------------------------HHHHHHH
T ss_pred             eEEeeEEeeCCCeEEEEEEECCC--------CeEEEEEEECCccch---------------------------HHHHHHH
Confidence            78899999999999999998666        899999998653210                           0113579


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+| ..-..+. ....+|||||+. .|.....+..   ..++...+..++.||+.+|.+|| .+|||||||
T Consensus        64 ~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~-~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH-~~~iiHrDl  141 (287)
T d1opja_          64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT-YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRDL  141 (287)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT-TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhCCCCCEecCCccEeeCCeeEEEeeccc-CcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH-HCCcccCcc
Confidence            999999987653 2211111 245689999996 4555444432   35788889999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||.|...
T Consensus       142 Kp~NILl~~~~~~Kl~DFG~a~~~  165 (287)
T d1opja_         142 AARNCLVGENHLVKVADFGLSRLM  165 (287)
T ss_dssp             SGGGEEECGGGCEEECCCCCTTTC
T ss_pred             ccCeEEECCCCcEEEccccceeec
Confidence            99999994 689999999999754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.7e-23  Score=189.90  Aligned_cols=141  Identities=15%  Similarity=0.129  Sum_probs=107.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.. .+        ++.||||+++.....                           .-...+
T Consensus        14 ~~~~~~~iG~G~fg~Vy~~~~-~~--------~~~vAvK~~~~~~~~---------------------------~~~~~~   57 (272)
T d1qpca_          14 TLKLVERLGAGQFGEVWMGYY-NG--------HTKVAVKSLKQGSMS---------------------------PDAFLA   57 (272)
T ss_dssp             GEEEEEEEEEETTEEEEEEEE-TT--------TEEEEEEEECTTSSC---------------------------HHHHHH
T ss_pred             HeEEeEEEecCCCcEEEEEEE-CC--------CCEEEEEEEccCcCC---------------------------HHHHHH
Confidence            378999999999999999998 55        789999998652110                           011357


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      |+..|.+|.+.+| ..-........+|||||+. .|.....+..   .+++..++..++.||+.+|.+|| .+|||||||
T Consensus        58 E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~-~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH-~~~ivHrDi  135 (272)
T d1qpca_          58 EANLMKQLQHQRLVRLYAVVTQEPIYIITEYME-NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-ERNYIHRDL  135 (272)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT-TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred             HHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCC-CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCcc
Confidence            9999999977653 2222222345689999996 4544332222   25888899999999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||+|...
T Consensus       136 Kp~NIll~~~~~~Kl~DFGla~~~  159 (272)
T d1qpca_         136 RAANILVSDTLSCKIADFGLARLI  159 (272)
T ss_dssp             SGGGEEECTTSCEEECCCTTCEEC
T ss_pred             chhheeeecccceeeccccceEEc
Confidence            99999995 589999999999754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.2e-23  Score=190.53  Aligned_cols=149  Identities=17%  Similarity=0.119  Sum_probs=111.1

Q ss_pred             hcCceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         32 SRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        32 ~~g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      +.|-.|++...||+|+||.||+|.+..+        |+.||||+++.....-                        ....
T Consensus         6 ~~gry~~~~~~iG~G~fg~Vy~~~~~~~--------~~~va~K~i~~~~~~~------------------------~~~~   53 (270)
T d1t4ha_           6 NDGRFLKFDIEIGRGSFKTVYKGLDTET--------TVEVAWCELQDRKLTK------------------------SERQ   53 (270)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEEEGGGSCH------------------------HHHH
T ss_pred             CCCCEEEeeeEEecCcCcEEEEEEECCC--------CeEEEEEEEchhhCCH------------------------HHHH
Confidence            3566778989999999999999999666        8999999987522110                        0112


Q ss_pred             HHHHHHHHHHHhhhCCC-Cccccccc-----cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        112 WAEKEMRNLTRMYSEGL-NVPKPILL-----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi-~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      ...+|+..|++|.+.+| ..-..+..     ...+|||||+. .|.....+.. ..++..+++.++.||+.+|.+||. .
T Consensus        54 ~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~-~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~-~  131 (270)
T d1t4ha_          54 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT-SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT-R  131 (270)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCC-SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-S
T ss_pred             HHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCC-CCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHH-C
Confidence            24579999999977653 22211111     22479999995 4444444433 468889999999999999999994 7


Q ss_pred             C--ccccCCCCCceEEe--CCeEEEEEccccccC
Q psy10135        185 H--LVHADLSEYNMLVH--KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 g--lVH~DLkp~NILi~--~g~l~IIDFG~Av~~  214 (351)
                      |  ||||||||+|||+.  ++.++|+|||.|...
T Consensus       132 ~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~  165 (270)
T d1t4ha_         132 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  165 (270)
T ss_dssp             SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             CCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence            7  99999999999994  479999999999643

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4.7e-23  Score=198.62  Aligned_cols=146  Identities=17%  Similarity=0.145  Sum_probs=111.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....  + ...                    .....+|
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~~~--------g~~~AvK~i~~~~~~--~-~~~--------------------~~~~~~E   91 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHKES--------GNHYAMKILDKQKVV--K-LKQ--------------------IEHTLNE   91 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHH--H-TTC--------------------HHHHHHH
T ss_pred             eEEEEEeecCcCcEEEEEEECCC--------CCEEEEEEEchHHcc--C-HHH--------------------HHHHHHH
Confidence            99999999999999999999777        999999998752110  0 000                    0123578


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +.+|++|.+.+| ..-..+.. ...++||||+. +|.....+. ...+++.+++.++.||+.+|.+|| ++|||||||||
T Consensus        92 ~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~-~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH-~~~iiHRDIKP  169 (350)
T d1rdqe_          92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA-GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKP  169 (350)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSG
T ss_pred             HHHHHHcCCCcEeeccccccccccccccccccc-ccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHH-hCCEecCcCCH
Confidence            999998876653 22222222 34579999996 444444443 357899999999999999999999 59999999999


Q ss_pred             CceEEe-CCeEEEEEccccccCC
Q psy10135        194 YNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       194 ~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      .|||+. +|.++|+|||.|....
T Consensus       170 ~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         170 ENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             GGEEECTTSCEEECCCTTCEECS
T ss_pred             HHcccCCCCCEEeeeceeeeecc
Confidence            999994 6899999999997654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.8e-23  Score=192.22  Aligned_cols=147  Identities=14%  Similarity=0.119  Sum_probs=103.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++.....-                        .......+
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~--------~~~vAvK~i~~~~~~~------------------------~~~~~~~~   52 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSD--------GKILVWKELDYGSMTE------------------------AEKQMLVS   52 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTT--------CCEEEEEEECCTTSCH------------------------HHHHHHHH
T ss_pred             hCEEeEEEecCCCeEEEEEEECCC--------CCEEEEEEEChhhCCH------------------------HHHHHHHH
Confidence            389999999999999999999777        9999999987632110                        01123467


Q ss_pred             HHHHHHHhhhCCC-Ccccccc---ccceEEEEcccCcccccccccc-----cCCCCHHHHHHHHHHHHHHHHHHHhhC--
Q psy10135        116 EMRNLTRMYSEGL-NVPKPIL---LKSHVLLMTFIGEDGWPAAKLK-----DTPLTESGACKLYRECVVMMWRLYNKC--  184 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~---~~~~vLVMEfig~~G~~~~~L~-----~~~l~~~~~~~l~~qll~~L~~LH~~~--  184 (351)
                      |+.+|.+|.+.+| ..-..+.   ....+|||||+. +|.....+.     ...+++..+..++.||+.+|.+||.+.  
T Consensus        53 E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~-~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~  131 (269)
T d2java1          53 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE-GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG  131 (269)
T ss_dssp             HHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCT-TEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCC-CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999977653 2222221   123479999995 444433332     245899999999999999999999532  


Q ss_pred             --CccccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        185 --HLVHADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       185 --glVH~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                        +||||||||.|||++ ++.++|+|||.|....
T Consensus       132 ~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  165 (269)
T d2java1         132 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  165 (269)
T ss_dssp             --------CCGGGEEECTTSCEEECCHHHHHHC-
T ss_pred             CCCEEeCcCchhhcCcCCCCcEEEeeccceeecc
Confidence              399999999999995 6899999999997553

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.2e-23  Score=192.57  Aligned_cols=139  Identities=16%  Similarity=0.126  Sum_probs=105.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|..           +..||||+++......                      .  ......+|
T Consensus        10 ~~~~~~lG~G~fg~Vy~~~~-----------~~~vAvK~~~~~~~~~----------------------~--~~~~~~~E   54 (276)
T d1uwha_          10 ITVGQRIGSGSFGTVYKGKW-----------HGDVAVKMLNVTAPTP----------------------Q--QLQAFKNE   54 (276)
T ss_dssp             CCCCSEEEECSSCEEEEEES-----------SSEEEEEECCCSSCCT----------------------T--HHHHHHHH
T ss_pred             EEEEEEEeeCCCcEEEEEEE-----------CCEEEEEEEEcccCCH----------------------H--HHHHHHHH
Confidence            78899999999999999976           3469999987532110                      0  01123579


Q ss_pred             HHHHHHhhhCCCCcccccc---ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGLNVPKPIL---LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~---~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+|-  ..+.   ....+|||||+. .|.....+.  ...++..++..++.||+.+|.+|| ..|||||||
T Consensus        55 ~~~l~~l~HpnIv--~~~~~~~~~~~~lv~Ey~~-~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH-~~~ivHrDl  130 (276)
T d1uwha_          55 VGVLRKTRHVNIL--LFMGYSTAPQLAIVTQWCE-GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH-AKSIIHRDL  130 (276)
T ss_dssp             HHHHTTCCCTTBC--CEEEEECSSSCEEEEECCC-EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhCCCCCEe--eeeEEEeccEEEEEEecCC-CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh-cCCEecccc
Confidence            9999999877642  2222   245689999995 454444443  345889999999999999999999 589999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||+|...
T Consensus       131 Kp~NiLl~~~~~~Kl~DFGla~~~  154 (276)
T d1uwha_         131 KSNNIFLHEDLTVKIGDFGLATVK  154 (276)
T ss_dssp             CGGGEEEETTSSEEECCCCCSCC-
T ss_pred             CHHHEEEcCCCCEEEccccceeec
Confidence            99999995 689999999999654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-22  Score=194.00  Aligned_cols=145  Identities=21%  Similarity=0.227  Sum_probs=106.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++.....                        ......+.+
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~~~--------~~~vAiK~i~~~~~~------------------------~~~~~~~~~   66 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDGRT--------GAKVAIKKLYRPFQS------------------------ELFAKRAYR   66 (346)
T ss_dssp             SEEEEEEC------CEEEEEETTT--------CCEEEEEECSSTTSS------------------------HHHHHHHHH
T ss_pred             cEEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEEchhhcC------------------------hHHHHHHHH
Confidence            389999999999999999999777        999999998753110                        011223467


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV  187 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glV  187 (351)
                      |+.+|++|.+.+| ..-..+..       ...+|||||+|  +......+..+++...++.++.||+.+|.+|| .+|||
T Consensus        67 Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~--~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~Ii  143 (346)
T d1cm8a_          67 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG--TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH-AAGII  143 (346)
T ss_dssp             HHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCS--EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEE
T ss_pred             HHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEeccc--ccHHHHHHhccccHHHHHHHHHHHHHHHHHHH-hCCCc
Confidence            9999999977653 22222221       23589999995  33333344567999999999999999999999 59999


Q ss_pred             ccCCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        188 HADLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       188 H~DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||||.|||++ ++.++|+|||.|...+
T Consensus       144 HrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_         144 HRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ccccCcchhhcccccccccccccceeccC
Confidence            999999999995 6899999999998664

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=5.2e-23  Score=194.86  Aligned_cols=144  Identities=21%  Similarity=0.200  Sum_probs=104.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      .|++.++||+|+||.||+|.+..+        |+.||||++........                         .....+
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~--------~~~vAvK~i~~~~~~~~-------------------------~~~~~~   56 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRT--------QKLVAIKCIAKKALEGK-------------------------EGSMEN   56 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTT--------CCEEEEEEEEC-----------------------------------CH
T ss_pred             ceEEEEEEeeccCeEEEEEEECCC--------CCEEEEEEEchHHhhhH-------------------------HHHHHH
Confidence            399999999999999999999667        99999999976321100                         011246


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|.+|.+.+| .+-..+.. ...+|||||+. +|.+...+.. ..+++.++..++.||+.+|.+|| ..||||||||
T Consensus        57 Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~-gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH-~~~iiHrDiK  134 (307)
T d1a06a_          57 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS-GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH-DLGIVHRDLK  134 (307)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCC
T ss_pred             HHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC-CCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhh-hceeeeEEec
Confidence            8999999977653 22222222 44579999995 3544444433 46999999999999999999999 5999999999


Q ss_pred             CCceEEe----CCeEEEEEccccccC
Q psy10135        193 EYNMLVH----KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~----~g~l~IIDFG~Av~~  214 (351)
                      |.|||+.    ++.++|+|||.|...
T Consensus       135 p~Nil~~~~~~~~~vkl~DFG~a~~~  160 (307)
T d1a06a_         135 PENLLYYSLDEDSKIMISDFGLSKME  160 (307)
T ss_dssp             GGGEEESSSSTTCCEEECCC------
T ss_pred             ccceeecccCCCceEEEeccceeEEc
Confidence            9999993    478999999999644

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.88  E-value=3.7e-22  Score=188.88  Aligned_cols=137  Identities=15%  Similarity=0.172  Sum_probs=106.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+..+        |+.||||+++....                             ....+|
T Consensus        37 y~i~~~LG~G~fg~V~~a~~~~~--------~~~vAiK~i~~~~~-----------------------------~~~~~E   79 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAINITN--------NEKVVVKILKPVKK-----------------------------KKIKRE   79 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECSSCH-----------------------------HHHHHH
T ss_pred             eEEEEEEecCcCeEEEEEEECCC--------CCEEEEEEECHHHH-----------------------------HHHHHH
Confidence            99999999999999999999767        99999999875210                             013468


Q ss_pred             HHHHHHhh-hCCCC-cccccc---ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMY-SEGLN-VPKPIL---LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~-~~gi~-vP~pi~---~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +.+|..|. +.+|. .-..+.   ....++||||++  |..+..+. ..+++.+++.++.||+.+|.+|| ++|||||||
T Consensus        80 i~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~--~~~L~~~~-~~l~e~~i~~i~~qil~aL~~LH-~~gIvHrDi  155 (328)
T d3bqca1          80 IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN--NTDFKQLY-QTLTDYDIRFYMYEILKALDYCH-SMGIMHRDV  155 (328)
T ss_dssp             HHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCC--SCBGGGTT-TSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCC
T ss_pred             HHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecC--CCcHHHHh-cCCCHHHHHHHHHHHHHHHHHHh-hcccccccc
Confidence            99999995 45432 112221   134689999995  43333332 35899999999999999999999 599999999


Q ss_pred             CCCceEEe-C-CeEEEEEccccccC
Q psy10135        192 SEYNMLVH-K-ATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~-g~l~IIDFG~Av~~  214 (351)
                      ||+|||+. + +.++|+|||.|...
T Consensus       156 Kp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         156 KPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             SGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             cccceEEcCCCCeeeecccccceec
Confidence            99999995 3 46999999999754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=1e-22  Score=197.29  Aligned_cols=145  Identities=16%  Similarity=0.171  Sum_probs=104.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.++||+|+||.||+|.+..+        |+.||||++..........                       .....+|
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t--------~~~vAiK~i~~~~~~~~~~-----------------------~~~~~~e   54 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADT--------GKMYAMKCLDKKRIKMKQG-----------------------ETLALNE   54 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEEHHHHHHHTC-----------------------HHHHHHH
T ss_pred             CeeeeEEecCCCeEEEEEEECCC--------CCEEEEEEEchHHcchhhH-----------------------HHHHHHH
Confidence            89999999999999999999667        9999999987532111110                       1112233


Q ss_pred             ---HHHHHHhhhCCC-Cccccccc-cceEEEEcccCcccccccccc-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 ---MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-DTPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ---~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                         +..|..+.+.+| .+-..+.. ...+|||||+. +|.+...+. ...+++.+++.++.||+.+|.+|| .+||||||
T Consensus        55 ~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~-gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH-~~~iiHrD  132 (364)
T d1omwa3          55 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN-GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-NRFVVYRD  132 (364)
T ss_dssp             HHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCC-SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCC
T ss_pred             HHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecC-CCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHH-HCCcccee
Confidence               444444433332 11111222 44689999995 444444443 346888899999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||+|||++ +|.++|+|||+|...
T Consensus       133 lKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3         133 LKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             CSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             eccceeEEcCCCcEEEeeeceeeec
Confidence            999999995 689999999999755

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.87  E-value=1.3e-22  Score=188.41  Aligned_cols=143  Identities=17%  Similarity=0.139  Sum_probs=108.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+ .+        |+.||||+++.....    ..+.                    ....+|
T Consensus         4 Y~~~~~iG~G~fg~Vy~~~~-~~--------~~~vAvK~i~~~~~~----~~~~--------------------~~~~~E   50 (286)
T d1ob3a_           4 YHGLEKIGEGTYGVVYKAQN-NY--------GETFALKKIRLEKED----EGIP--------------------STTIRE   50 (286)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TT--------SCEEEEEEECCSSGG----GCCC--------------------HHHHHH
T ss_pred             ceeccEEecCCCcEEEEEEe-CC--------CCEEEEEEEehhhcC----hHHH--------------------HHHHHH
Confidence            88999999999999999998 56        899999999763210    0000                    123469


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|++|.+.+| .+-..+. ....+++||+++  |..+..+.  ...+++..+..++.||+.+|.+|| ..||||||||
T Consensus        51 ~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~--~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~IvHrDiK  127 (286)
T d1ob3a_          51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH-DRRVLHRDLK  127 (286)
T ss_dssp             HHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS--EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCC
T ss_pred             HHHHHhCCCCcEEeeeeecccCCceeEEEEeeh--hhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhc-cCcEEecCCC
Confidence            999999977653 2111111 245689999995  33333332  346899999999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccCC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~~  215 (351)
                      |+|||+ .++.++|+|||.|....
T Consensus       128 p~NIll~~~~~~kl~DfG~a~~~~  151 (286)
T d1ob3a_         128 PQNLLINREGELKIADFGLARAFG  151 (286)
T ss_dssp             GGGEEECTTSCEEECCTTHHHHHC
T ss_pred             CceeeEcCCCCEEecccccceecc
Confidence            999999 46899999999996554

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.87  E-value=4.6e-22  Score=186.32  Aligned_cols=139  Identities=14%  Similarity=0.167  Sum_probs=105.8

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|+|.+.||+|+||.||+|.+..+        |+.||||+.+....    .       ..                 ...
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~--------~~~vAvK~~~~~~~----~-------~~-----------------~~~   49 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLN--------NQQVAIKFEPRRSD----A-------PQ-----------------LRD   49 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTT--------TEEEEEEEEECCTT----S-------CC-----------------HHH
T ss_pred             ceEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEEccccC----c-------HH-----------------HHH
Confidence            499999999999999999998667        99999999865210    0       00                 235


Q ss_pred             HHHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        116 EMRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       116 E~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      |++.+..|.+.. .+|..+..    ...++||||+|  |.....+.  ...++...+..++.|++.+|.+|| ++|||||
T Consensus        50 e~~~~~~l~~~~-~i~~~~~~~~~~~~~~~vme~~~--~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH-~~giiHr  125 (293)
T d1csna_          50 EYRTYKLLAGCT-GIPNVYYFGQEGLHNVLVIDLLG--PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH-EKSLVYR  125 (293)
T ss_dssp             HHHHHHHTTTCT-TCCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-TTTEECC
T ss_pred             HHHHHHHhcCCC-CCCEEEEEeecCCccEEEEEecC--CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH-HCCceec
Confidence            788888886531 23444332    44589999995  43322232  345888899999999999999999 5999999


Q ss_pred             CCCCCceEEe------CCeEEEEEccccccC
Q psy10135        190 DLSEYNMLVH------KATLFIIDVAQSVEH  214 (351)
Q Consensus       190 DLkp~NILi~------~g~l~IIDFG~Av~~  214 (351)
                      ||||.|||+.      .+.++|+|||+|...
T Consensus       126 DiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_         126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             CCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             cCCccceeecCcccccCCceEEcccceeEEc
Confidence            9999999994      468999999999643

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.5e-22  Score=191.11  Aligned_cols=143  Identities=18%  Similarity=0.161  Sum_probs=105.9

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.+..+        |+.||||+++....     .                    .....+.+
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~--------~~~vAvK~i~~~~~-----~--------------------~~~~~~~~   55 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVN--------KVRVAIKKISPFEH-----Q--------------------TYCQRTLR   55 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTT--------CSEEEEEEECCTTC-----H--------------------HHHHHHHH
T ss_pred             CeEEEEEEeeccCeEEEEEEECCC--------CcEEEEEEEehhcC-----h--------------------HHHHHHHH
Confidence            389999999999999999998677        99999999865210     0                    01112457


Q ss_pred             HHHHHHHhhhCCC-Cccccccc-----cce-EEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL-----KSH-VLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~-----~~~-vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      |+.+|+.|.+.++ .+...+..     ..+ +|+|++.  +|.+...+...+++...++.++.||+.+|.+|| ++||||
T Consensus        56 Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~--~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH-~~~iiH  132 (345)
T d1pmea_          56 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM--GADLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SANVLH  132 (345)
T ss_dssp             HHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC--CEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeec--CCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCcC
Confidence            9999999987663 22222211     223 4555544  465555566668999999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||+|||++ ++.++|+|||.|...
T Consensus       133 RDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_         133 RDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCCCcceEEECCCCCEEEcccCceeec
Confidence            99999999995 589999999998643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2e-22  Score=191.79  Aligned_cols=145  Identities=18%  Similarity=0.156  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++......                        .....+.+|
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~~~--------~~~vAiK~i~~~~~~~------------------------~~~~~~~~E   67 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDTKT--------GLRVAVKKLSRPFQSI------------------------IHAKRTYRE   67 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEETTT--------TEEEEEEECSCTTSSH------------------------HHHHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEECCC--------CCEEEEEEECchhcCh------------------------HHHHHHHHH
Confidence            89999999999999999998777        9999999987532111                        011234579


Q ss_pred             HHHHHHhhhCCC-Ccccccc------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCcccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHA  189 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~  189 (351)
                      +.+|++|.+.++ .....+.      ...++++|+++. +|.+...+...++++.+++.++.||+.+|.+|| ++|||||
T Consensus        68 i~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~-gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH-~~giiHr  145 (348)
T d2gfsa1          68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SADIIHR  145 (348)
T ss_dssp             HHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCC
T ss_pred             HHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeec-CCchhhhcccccccHHHHHHHHHHHHHHHHHHH-hCCCccc
Confidence            999999977663 2222222      123455566663 455544455567999999999999999999999 5999999


Q ss_pred             CCCCCceEEe-CCeEEEEEccccccCC
Q psy10135        190 DLSEYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       190 DLkp~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      ||||+|||++ ++.++++|||.|....
T Consensus       146 DiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1         146 DLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CCCGGGEEECTTCCEEECCC----CCT
T ss_pred             ccCCccccccccccccccccchhcccC
Confidence            9999999994 6899999999997654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.6e-22  Score=184.05  Aligned_cols=144  Identities=15%  Similarity=0.104  Sum_probs=109.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....    .                    -....+.+|
T Consensus         4 y~~i~~LG~G~fg~V~~~~~~~~--------~~~vAvK~i~~~~~~----~--------------------~~~~~~~~E   51 (292)
T d1unla_           4 YEKLEKIGEGTYGTVFKAKNRET--------HEIVALKRVRLDDDD----E--------------------GVPSSALRE   51 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEEESSCSS----T--------------------THHHHHHHH
T ss_pred             CEeeeEEecCcCeEEEEEEECCC--------CcEEEEEEEehhhCC----h--------------------HHHHHHHHH
Confidence            89999999999999999999777        999999999763210    0                    012234679


Q ss_pred             HHHHHHhhhCCC-Cccccccc-cceEEEEcccCccccccccc-c-cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKL-K-DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L-~-~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|+.+.+.+| ..-..+.. ...++||++++  |..+..+ . ...++...++.++.|++.+|.+|| .+||||||||
T Consensus        52 ~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH-~~~IvHrDiK  128 (292)
T d1unla_          52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD--QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH-SRNVLHRDLK  128 (292)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS--EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCS
T ss_pred             HHHHHhcCcCCEEeeccccccccceeEEeeecc--ccccccccccccccchhHHHHHHHHHHHHHHHhh-cCCEeeeccc
Confidence            999999877653 22222222 34579999995  4333333 2 235788899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccCC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEHD  215 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~~  215 (351)
                      |+|||+. ++.++|+|||.|....
T Consensus       129 P~NIli~~~~~~kl~DFG~a~~~~  152 (292)
T d1unla_         129 PQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECC
T ss_pred             CcccccccCCceeeeecchhhccc
Confidence            9999995 6899999999997654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.4e-22  Score=190.12  Aligned_cols=138  Identities=13%  Similarity=0.126  Sum_probs=105.3

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|.+.++||+|+||.||+|.+..+        |+.||||+++...       .       +                ..+
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~--------~~~vAiK~i~~~~-------~-------~----------------~~~   62 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDS--------GELVAIKKVLQDK-------R-------F----------------KNR   62 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT--------CCEEEEEEEECCS-------S-------S----------------CCH
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCC--------CCEEEEEEECccc-------h-------H----------------HHH
Confidence            489999999999999999999767        9999999987521       0       0                025


Q ss_pred             HHHHHHHhhhCCC-Cccccccc------c-ceEEEEcccCccccccccc-----ccCCCCHHHHHHHHHHHHHHHHHHHh
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILL------K-SHVLLMTFIGEDGWPAAKL-----KDTPLTESGACKLYRECVVMMWRLYN  182 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~------~-~~vLVMEfig~~G~~~~~L-----~~~~l~~~~~~~l~~qll~~L~~LH~  182 (351)
                      |+.+|++|.+.+| .+...+..      . ..+|||||++ .| ....+     ....++..+++.++.||+.+|.+|| 
T Consensus        63 Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~-~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH-  139 (350)
T d1q5ka_          63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-  139 (350)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCS-EE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccC-Cc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            8889999976653 22222211      1 1379999996 33 22222     2346899999999999999999999 


Q ss_pred             hCCccccCCCCCceEEe-CC-eEEEEEccccccC
Q psy10135        183 KCHLVHADLSEYNMLVH-KA-TLFIIDVAQSVEH  214 (351)
Q Consensus       183 ~~glVH~DLkp~NILi~-~g-~l~IIDFG~Av~~  214 (351)
                      .+|||||||||+|||+. ++ .++|+|||.|...
T Consensus       140 ~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_         140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             TTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             hcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            59999999999999995 44 7999999999654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=7.5e-22  Score=184.39  Aligned_cols=142  Identities=15%  Similarity=0.125  Sum_probs=106.1

Q ss_pred             CceeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHH
Q psy10135         34 GMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWA  113 (351)
Q Consensus        34 g~~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~a  113 (351)
                      |--|+|.+.||+|+||.||+|.+..+        |+.||||+.+....     .      .+                 .
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~--------~~~vAvK~~~~~~~-----~------~~-----------------~   49 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAA--------GEEVAIKLECVKTK-----H------PQ-----------------L   49 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTT--------TEEEEEEEEESCTT-----S------CC-----------------H
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCC--------CCEEEEEEEchhcc-----C------HH-----------------H
Confidence            33499999999999999999998677        99999999875310     0      01                 2


Q ss_pred             HHHHHHHHHhhhCC-CCcccccc--ccceEEEEcccCccccccccc--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        114 EKEMRNLTRMYSEG-LNVPKPIL--LKSHVLLMTFIGEDGWPAAKL--KDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       114 ekE~~nL~rL~~~g-i~vP~pi~--~~~~vLVMEfig~~G~~~~~L--~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ..|...++++.+.. |.....+.  ....++||||+|  |.....+  ....++...+..++.|++.+|.+|| ++||||
T Consensus        50 ~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~--~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~iiH  126 (299)
T d1ckia_          50 HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG--PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH-SKNFIH  126 (299)
T ss_dssp             HHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC--CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH-HTTEEC
T ss_pred             HHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC--CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH-HCCeee
Confidence            35888888886543 22211111  134579999996  3332222  2346899999999999999999999 599999


Q ss_pred             cCCCCCceEEe----CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH----KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~----~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+.    +..++|+|||.|...
T Consensus       127 rDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_         127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             SCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             ccCCHhhccccccCCCceeeeeccCcceec
Confidence            99999999984    347999999999754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.6e-22  Score=189.35  Aligned_cols=137  Identities=18%  Similarity=0.234  Sum_probs=104.0

Q ss_pred             eeecc-eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVNG-CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~~-~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      |.|.+ +||+|+||.||+|.+..+        |+.||||+++...                               ...+
T Consensus        13 y~i~~~~lG~G~fg~Vy~a~~~~~--------~~~vAiK~i~~~~-------------------------------~~~~   53 (335)
T d2ozaa1          13 YKVTSQVLGLGINGKVLQIFNKRT--------QEKFALKMLQDCP-------------------------------KARR   53 (335)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTT--------CCEEEEEEEECSH-------------------------------HHHH
T ss_pred             EEEeeEEeeeccCeEEEEEEECCC--------CCEEEEEEECCcH-------------------------------HHHH
Confidence            78764 699999999999999777        9999999986421                               1245


Q ss_pred             HHHHHHHh-hhCC-CCccccccc-----cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy10135        116 EMRNLTRM-YSEG-LNVPKPILL-----KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCH  185 (351)
Q Consensus       116 E~~nL~rL-~~~g-i~vP~pi~~-----~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~g  185 (351)
                      |+.++.++ .+.+ +.+-..+..     ...+|||||+. +|.+...+..   ..+++.+++.++.||+.+|.+|| .+|
T Consensus        54 E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~-gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH-~~~  131 (335)
T d2ozaa1          54 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD-GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH-SIN  131 (335)
T ss_dssp             HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC-SEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCC-CCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH-HcC
Confidence            78887766 3444 222222211     23489999995 4555444543   35899999999999999999999 599


Q ss_pred             ccccCCCCCceEEe----CCeEEEEEccccccC
Q psy10135        186 LVHADLSEYNMLVH----KATLFIIDVAQSVEH  214 (351)
Q Consensus       186 lVH~DLkp~NILi~----~g~l~IIDFG~Av~~  214 (351)
                      ||||||||+|||+.    .+.++|+|||.|...
T Consensus       132 iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1         132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             Cccccccccccccccccccccccccccceeeec
Confidence            99999999999995    357999999999644

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-21  Score=182.59  Aligned_cols=145  Identities=17%  Similarity=0.145  Sum_probs=105.6

Q ss_pred             eeecce-eeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         37 SEVNGC-ISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        37 y~I~~~-Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      +.+... ||+|+||.||+|.....      ..+..||||+++.....                         .......+
T Consensus        10 ~~~~~~~iG~G~fg~Vy~~~~~~~------~~~~~vAvK~l~~~~~~-------------------------~~~~~~~~   58 (285)
T d1u59a_          10 LLIADIELGCGNFGSVRQGVYRMR------KKQIDVAIKVLKQGTEK-------------------------ADTEEMMR   58 (285)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---------CCEEEEEEEECSSCCH-------------------------HHHHHHHH
T ss_pred             eEECCcEEecccCeEEEEEEEecC------CCcEEEEEEEEChhcCH-------------------------HHHHHHHH
Confidence            456664 99999999999976332      11568999998753210                         01112357


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+..|.+|.+.+| .+-..+.....+|||||+. .|.....+..  ..++..++..++.||+.+|.+|| ++||||||||
T Consensus        59 E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~-~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH-~~~iiHrDlK  136 (285)
T d1u59a_          59 EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAG-GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLA  136 (285)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEESSSEEEEEECCT-TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCS
T ss_pred             HHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCC-CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCcCc
Confidence            9999999977653 2222233356689999995 3443333332  45888999999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |.|||+ .++.++|+|||+|...
T Consensus       137 p~Nill~~~~~~Kl~DFGla~~~  159 (285)
T d1u59a_         137 ARNVLLVNRHYAKISDFGLSKAL  159 (285)
T ss_dssp             GGGEEEEETTEEEECCCTTCEEC
T ss_pred             hhheeeccCCceeeccchhhhcc
Confidence            999999 5789999999999754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.2e-22  Score=181.87  Aligned_cols=140  Identities=16%  Similarity=0.126  Sum_probs=103.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.. .+        +..||||+++.....                           +....+|
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~-~~--------~~~vAvK~i~~~~~~---------------------------~~~~~~E   50 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYW-LN--------KDKVAIKTIREGAMS---------------------------EEDFIEE   50 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEE-TT--------TEEEEEEECCSSSSC---------------------------HHHHHHH
T ss_pred             cEEEEEEeeCCCeEEEEEEE-CC--------CCEEEEEEECCCcCc---------------------------HHHHHHH
Confidence            78999999999999999998 56        788999998752110                           0113469


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.+| .+-..+. ....+|||||+. .|.....+..  ..++...+..++.||+.+|.+|| .+||||||||
T Consensus        51 ~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH-~~~iiHrDlK  128 (263)
T d1sm2a_          51 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME-HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDLA  128 (263)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT-TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCTTCS
T ss_pred             HHHHHhcCCCCcccccceeccCCceEEEEEecC-CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh-ccceeecccc
Confidence            999999977653 2211111 245689999995 4544333333  34778888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ ++.++|+|||.|...
T Consensus       129 p~Nill~~~~~~Kl~DFGla~~~  151 (263)
T d1sm2a_         129 ARNCLVGENQVIKVSDFGMTRFV  151 (263)
T ss_dssp             GGGEEECGGGCEEECSCC-----
T ss_pred             hhheeecCCCCeEecccchheec
Confidence            9999995 689999999998644

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-21  Score=186.25  Aligned_cols=145  Identities=19%  Similarity=0.182  Sum_probs=106.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.........                     .  .....|
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t--------~~~vAvK~i~k~~~~~~~~---------------------~--~~~~~e   52 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKT--------NQFFAIKALKKDVVLMDDD---------------------V--ECTMVE   52 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------TEEEEEEEEEHHHHHHTTC---------------------H--HHHHHH
T ss_pred             eEEeeEEecCCCcEEEEEEECCC--------CCEEEEEEEchhhccChHH---------------------H--HHHHHH
Confidence            89999999999999999999767        9999999997532111100                     0  011245


Q ss_pred             HHHHH-HhhhCCC-Cccccccc-cceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLT-RMYSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~-rL~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      ...|. .+.+.+| .+-..+.. ...+|||||+. .|.....+.. ..+++.+++.++.||+.||.+|| ++||||||||
T Consensus        53 ~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~-~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH-~~~iiHrDik  130 (320)
T d1xjda_          53 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN-GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH-SKGIVYRDLK  130 (320)
T ss_dssp             HHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT-TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCC
T ss_pred             HHHHHHhCCCCcEEEEEEEEccCCceeEEEeecC-CCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCc
Confidence            55554 4555542 22222222 34579999995 4554444433 46889999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       131 p~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_         131 LDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             GGGEEECTTSCEEECCCTTCBCC
T ss_pred             ccceeecCCCceeccccchhhhc
Confidence            9999995 589999999999754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.9e-22  Score=183.78  Aligned_cols=142  Identities=18%  Similarity=0.155  Sum_probs=103.8

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      +.||+|+||.||+|.....      ..++.||||+++.....                      +  ..+....+|+..|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~------~~~~~vAvK~~~~~~~~----------------------~--~~~~~~~~E~~il   62 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMK------KVVKTVAVKILKNEAND----------------------P--ALKDELLAEANVM   62 (277)
T ss_dssp             EEEEECSSEEEEEEEEECS------SSEEEEEEEEEC---------------------------C--HHHHHHHHHHHHH
T ss_pred             CCcccCCCeEEEEEEEccC------CcCeEEEEEEEChhhCC----------------------H--HHHHHHHHHHHHH
Confidence            5799999999999976322      11678999998753210                      0  1112345799999


Q ss_pred             HHhhhCCC-CccccccccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCceEE
Q psy10135        121 TRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV  198 (351)
Q Consensus       121 ~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp~NILi  198 (351)
                      .+|.+.+| ..-..+.....+|||||+. .|.....+.. ..++..++..++.||+.+|.+|| ++|||||||||.|||+
T Consensus        63 ~~l~HpnIv~~~g~~~~~~~~lvmE~~~-~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH-~~~iiHrDlKp~Nill  140 (277)
T d1xbba_          63 QQLDNPYIVRMIGICEAESWMLVMEMAE-LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLL  140 (277)
T ss_dssp             HTCCCTTBCCEEEEEESSSEEEEEECCT-TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEE
T ss_pred             HhCCCCCCceEEEEeccCCEEEEEEcCC-CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHH-hCCcccCCCcchhhcc
Confidence            99977663 2222233356689999995 3444333433 45899999999999999999999 5999999999999999


Q ss_pred             -eCCeEEEEEccccccC
Q psy10135        199 -HKATLFIIDVAQSVEH  214 (351)
Q Consensus       199 -~~g~l~IIDFG~Av~~  214 (351)
                       .++.++|+|||+|...
T Consensus       141 ~~~~~~kl~DFGla~~~  157 (277)
T d1xbba_         141 VTQHYAKISDFGLSKAL  157 (277)
T ss_dssp             EETTEEEECCCTTCEEC
T ss_pred             cccCcccccchhhhhhc
Confidence             5799999999999754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-21  Score=183.83  Aligned_cols=140  Identities=16%  Similarity=0.125  Sum_probs=107.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+ .+        +..||||+++.....                           +....+|
T Consensus        19 ~~i~~~iG~G~fg~Vy~~~~-~~--------~~~vAiK~l~~~~~~---------------------------~~~~~~E   62 (285)
T d1fmka3          19 LRLEVKLGQGCFGEVWMGTW-NG--------TTRVAIKTLKPGTMS---------------------------PEAFLQE   62 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TT--------TEEEEEEECCTTSSC---------------------------HHHHHHH
T ss_pred             EEEeeEEeeCCCeEEEEEEE-CC--------CCEEEEEEECcccCC---------------------------HHHHHHH
Confidence            89999999999999999998 55        678999998753210                           0113469


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc---cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK---DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~---~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.++.+.+| ..-..+.....+|||||+. .|.....+.   ...++..++..++.||+.+|.+|| ..||||||||
T Consensus        63 ~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~-~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH-~~~ivH~DlK  140 (285)
T d1fmka3          63 AQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS-KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLR  140 (285)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSCEEEECCCT-TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCS
T ss_pred             HHHHHhcccCCEeEEEEEEecCCeEEEEEecC-CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh-hhheeccccc
Confidence            999999987763 2222233356789999996 454333332   235899999999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ ++.++|+|||.|...
T Consensus       141 p~NIll~~~~~~kl~DfGla~~~  163 (285)
T d1fmka3         141 AANILVGENLVCKVADFGLARLI  163 (285)
T ss_dssp             GGGEEECGGGCEEECCCCTTC--
T ss_pred             ceEEEECCCCcEEEcccchhhhc
Confidence            9999995 689999999999643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-21  Score=184.52  Aligned_cols=143  Identities=17%  Similarity=0.175  Sum_probs=105.2

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....    ..+                    ...+.+|
T Consensus        12 Y~i~~~LG~G~fg~Vy~a~~~~~--------~~~vAvK~i~~~~~~----~~~--------------------~~~~~~E   59 (318)
T d3blha1          12 YEKLAKIGQGTFGEVFKARHRKT--------GQKVALKKVLMENEK----EGF--------------------PITALRE   59 (318)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTT--------CCEEEEEEC----CT----TSS--------------------CHHHHHH
T ss_pred             EEEEEEEecCcCeEEEEEEECCC--------CCEEEEEEEehhhcc----hHH--------------------HHHHHHH
Confidence            89999999999999999998667        999999998653210    000                    0113479


Q ss_pred             HHHHHHhhhCCC-Cccccccc---------cceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILL---------KSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKC  184 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~---------~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~  184 (351)
                      +.+|++|.+.++ .....+..         ...++||||++ .| .+....  ...++...++.++.||+.+|.+|| ++
T Consensus        60 ~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~-~~-~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH-~~  136 (318)
T d3blha1          60 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-RN  136 (318)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCC-EE-HHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccC-CC-ccchhhhcccccccHHHHHHHHHHHHHHHHhc-cC
Confidence            999999987653 22222211         23579999996 23 222222  235888899999999999999999 59


Q ss_pred             CccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        185 HLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       185 glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||||||+|||+. ++.++|+|||.|...
T Consensus       137 ~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~  167 (318)
T d3blha1         137 KILHRDMKAANVLITRDGVLKLADFGLARAF  167 (318)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CEEecCcCchheeecCCCcEEeeecceeeec
Confidence            999999999999994 689999999999654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=1.9e-21  Score=183.12  Aligned_cols=146  Identities=18%  Similarity=0.134  Sum_probs=100.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|....+     ......||||.++.....                         .......+|
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~-----~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E   77 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLP-----GKREIFVAIKTLKSGYTE-------------------------KQRRDFLSE   77 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC--------CCEEEEEEECCSSCCH-------------------------HHHHHHHHH
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCC-----CCEEEEEEEEEECcccCH-------------------------HHHHHHHHH
Confidence            88999999999999999988444     001235888887642110                         011123579


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.+| ..-..+. ....+|||||+. .|.....+..  ..++..++..++.||+.+|.+|| .+|+||||||
T Consensus        78 ~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~-~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHrDlK  155 (299)
T d1jpaa_          78 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME-NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA-DMNYVHRDLA  155 (299)
T ss_dssp             HHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT-TEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCC
T ss_pred             HHHHHhCCCCCCccEEEEEeeCCEEEEEEEecC-CCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh-hCCCccCccc
Confidence            999999977653 2211111 145689999995 3433332332  35888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ ++.++|+|||+|...
T Consensus       156 p~NILl~~~~~~Kl~DFGla~~~  178 (299)
T d1jpaa_         156 ARNILVNSNLVCKVSDFGLSRFL  178 (299)
T ss_dssp             GGGEEECTTCCEEECCC------
T ss_pred             cceEEECCCCcEEECCcccceEc
Confidence            9999995 689999999999654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.4e-21  Score=179.24  Aligned_cols=147  Identities=18%  Similarity=0.104  Sum_probs=101.4

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.++||+|+||.||+|.+..+     ...+..||||+++....                         ...+....+
T Consensus         8 ~~~l~~~iG~G~fg~Vy~a~~~~~-----~~~~~~vaik~~~~~~~-------------------------~~~~~~~~~   57 (273)
T d1mp8a_           8 RIELGRCIGEGQFGDVHQGIYMSP-----ENPALAVAIKTCKNCTS-------------------------DSVREKFLQ   57 (273)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC-------CCEEEEEEECTTTTS-------------------------HHHHHHHHH
T ss_pred             HeEEEEEEeeCCCcEEEEEEEecC-----CceeEEEEEEEeccccC-------------------------HHHHHHHHH
Confidence            389999999999999999987432     11145688888754210                         011223457


Q ss_pred             HHHHHHHhhhCCC-CccccccccceEEEEcccCccccccccc--ccCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        116 EMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKL--KDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       116 E~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L--~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      |+.+|++|.+.+| ..-..+.....+|||||+. .|.....+  ....++..++..++.||+.+|.+|| .+|+||||||
T Consensus        58 E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E~~~-~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH-~~~iiHrDlK  135 (273)
T d1mp8a_          58 EALTMRQFDHPHIVKLIGVITENPVWIIMELCT-LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIA  135 (273)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECSSSCEEEEECCT-TEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCS
T ss_pred             HHHHHHhCCCCCEeeEEEEEecCeEEEEEEecc-CCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc-ccCeeccccc
Confidence            9999999977653 2222223355689999995 34333222  2346888899999999999999999 5999999999


Q ss_pred             CCceEE-eCCeEEEEEccccccC
Q psy10135        193 EYNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      |.|||+ .++.++|+|||.|...
T Consensus       136 p~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_         136 ARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             GGGEEEEETTEEEECC-------
T ss_pred             hhheeecCCCcEEEccchhheec
Confidence            999999 4689999999999754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.9e-21  Score=182.58  Aligned_cols=148  Identities=19%  Similarity=0.129  Sum_probs=102.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.....   .....+..||+|++......                         .......+|
T Consensus        39 ~~l~~~lG~G~fG~Vy~a~~~~~---~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E   90 (325)
T d1rjba_          39 LEFGKVLGSGAFGKVMNATAYGI---SKTGVSIQVAVKMLKEKADS-------------------------SEREALMSE   90 (325)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESC---SSSSCEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred             eEEeeEEeeCCCeEEEEEEEcCC---CcccceeEEEEEEeccccCH-------------------------HHHHHHHHH
Confidence            78999999999999999987432   00011346999988642100                         001123568


Q ss_pred             HHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCccccccccccc------------------------CCCCHHHHHHH
Q psy10135        117 MRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD------------------------TPLTESGACKL  169 (351)
Q Consensus       117 ~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~------------------------~~l~~~~~~~l  169 (351)
                      ...|.++ .+.+| ..-..+. ....+|||||+. .|.....|..                        ..++..++..+
T Consensus        91 ~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  169 (325)
T d1rjba_          91 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCC-YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF  169 (325)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT-TCBHHHHHHTTTTCC---------------------CCHHHHHHH
T ss_pred             HHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCC-CCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHH
Confidence            8999988 44442 2222221 245689999996 4544433322                        23777889999


Q ss_pred             HHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        170 YRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       170 ~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.||+.+|.+|| .+|||||||||.|||++ ++.++|+|||+|...
T Consensus       170 ~~qi~~gl~yLH-~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~  214 (325)
T d1rjba_         170 AYQVAKGMEFLE-FKSCVHRDLAARNVLVTHGKVVKICDFGLARDI  214 (325)
T ss_dssp             HHHHHHHHHHHH-HTTEEETTCSGGGEEEETTTEEEECCCGGGSCG
T ss_pred             HHHHHHHHHHHH-hCCeeeccCchhccccccCCeEEEeeccccccc
Confidence            999999999999 59999999999999995 689999999999643

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.7e-21  Score=179.87  Aligned_cols=148  Identities=16%  Similarity=0.085  Sum_probs=95.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.....   .....++.||||+++.....                         ........
T Consensus        14 ~y~~~~~iG~G~fG~Vy~a~~~~~---~~~~~~~~vAvK~l~~~~~~-------------------------~~~~~~~~   65 (299)
T d1ywna1          14 RLKLGKPLGRGAFGQVIEADAFGI---DKTATCRTVAVKMLKEGATH-------------------------SEHRALMS   65 (299)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEEST---TSSSCEEEEEEEEC----CH-------------------------HHHHHHHH
T ss_pred             HEEEeeEEeecCCeEEEEEEEcCC---CcccCCeEEEEEEEccccCc-------------------------HHHHHHHH
Confidence            389999999999999999986322   00112578999998742110                         00112245


Q ss_pred             HHHHHHHhhhC-CCC-cccccc--ccceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHH
Q psy10135        116 EMRNLTRMYSE-GLN-VPKPIL--LKSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECV  174 (351)
Q Consensus       116 E~~nL~rL~~~-gi~-vP~pi~--~~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll  174 (351)
                      |...+.++.+. .|. .-....  ....++||||+. .|.....+.                 ...++..++..++.||+
T Consensus        66 e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~  144 (299)
T d1ywna1          66 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK-FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA  144 (299)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCT-TCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecC-CCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHH
Confidence            77778777433 221 111111  123589999995 444333222                 12477888999999999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .+|.+|| .+|||||||||.|||++ ++.++|+|||.|..
T Consensus       145 ~gl~ylH-~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~  183 (299)
T d1ywna1         145 KGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD  183 (299)
T ss_dssp             HHHHHHH-HTTCCCSCCCGGGEEECGGGCEEECC------
T ss_pred             HHHHHHH-hCCCcCCcCCccceeECCCCcEEEccCcchhh
Confidence            9999999 59999999999999995 68999999999964

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.5e-21  Score=176.39  Aligned_cols=140  Identities=16%  Similarity=0.154  Sum_probs=106.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.. .+        ++.||||+++.+...                           +....+|
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~-~~--------~~~vAvK~l~~~~~~---------------------------~~~~~~E   49 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKW-RG--------QYDVAIKMIKEGSMS---------------------------EDEFIEE   49 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEE-TT--------TEEEEEEEEESSSSC---------------------------HHHHHHH
T ss_pred             CEEeEEEecCCCeEEEEEEE-CC--------CCEEEEEEECcCcCC---------------------------HHHHHHH
Confidence            67889999999999999998 56        889999998863211                           0113468


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..+.++.+.+| +.-..+. ....++||||+. .|.....+.  ...++...+..++.|++.+|.+|| .+||||||||
T Consensus        50 v~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~-~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH-~~~iiH~dlk  127 (258)
T d1k2pa_          50 AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA-NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-SKQFLHRDLA  127 (258)
T ss_dssp             HHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT-TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH-HTTBCCSCCS
T ss_pred             HHHHHhcCCCceeeEEEEEeeCCceEEEEEccC-CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh-hcCccccccc
Confidence            999999876653 2222111 145589999995 454333322  345788888999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||+. ++.++|+|||.|...
T Consensus       128 ~~Nill~~~~~~kl~DfG~a~~~  150 (258)
T d1k2pa_         128 ARNCLVNDQGVVKVSDFGLSRYV  150 (258)
T ss_dssp             GGGEEECTTCCEEECCCSSCCBC
T ss_pred             ceeEEEcCCCcEEECcchhheec
Confidence            9999995 589999999999643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.6e-21  Score=176.71  Aligned_cols=147  Identities=19%  Similarity=0.177  Sum_probs=102.4

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|....+    .......||||+++.....                       .  ......+|
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~----~~~~~~~vAvK~~~~~~~~-----------------------~--~~~~~~~E   59 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTS----SGKKEVPVAIKTLKAGYTE-----------------------K--QRVDFLGE   59 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC-------CCEEEEEEEEECTTCCH-----------------------H--HHHHHHHH
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCC----CCEEEEEEEEEEECcccCh-----------------------H--HHHHHHHH
Confidence            78889999999999999987433    0001247999998653210                       0  01123579


Q ss_pred             HHHHHHhhhCCC-Cccccc-cccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPI-LLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi-~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +..|.+|.+.+| ..-..+ .....++||||+. .|.....+.  ...++..++..++.||+.+|.+|| .+||||||||
T Consensus        60 ~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~-~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH-~~~iiHrDlK  137 (283)
T d1mqba_          60 AGIMGQFSHHNIIRLEGVISKYKPMMIITEYME-NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-NMNYVHRDLA  137 (283)
T ss_dssp             HHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT-TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCC
T ss_pred             HHHHHhcCCCCEeeeeEEEecCCceEEEEEecc-cCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc-ccccccCccc
Confidence            999999977653 221111 1245689999995 333322222  245888899999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ ++.++|+|||.|...
T Consensus       138 p~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_         138 ARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             GGGEEECTTCCEEECCCCC----
T ss_pred             cceEEECCCCeEEEcccchhhcc
Confidence            9999995 689999999999643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=180.94  Aligned_cols=142  Identities=16%  Similarity=0.178  Sum_probs=105.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+        |+.||||+++.....                      ..  ....+.+|
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t--------~~~vAvK~i~~~~~~----------------------~~--~~~~~~~E   66 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVL--------DRNVAIKKLSRPFQN----------------------QT--HAKRAYRE   66 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTT--------TEEEEEEEEESTTSS----------------------HH--HHHHHHHH
T ss_pred             eEEEEEeecCcCeEEEEEEECCC--------CCEEEEEEEChhhcC----------------------HH--HHHHHHHH
Confidence            89999999999999999999667        999999999763210                      00  11234689


Q ss_pred             HHHHHHhhhCCC-Ccccccc-------ccceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-------LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-------~~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      +.+|+++.+.+| ..-..+.       ....|+||||++  |..+..+ ...++..+++.++.||+.+|.+|| .+||||
T Consensus        67 i~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~--~~l~~~~-~~~~~~~~i~~~~~qil~gl~~LH-~~giiH  142 (355)
T d2b1pa1          67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD--ANLCQVI-QMELDHERMSYLLYQMLCGIKHLH-SAGIIH  142 (355)
T ss_dssp             HHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCS--EEHHHHH-TSCCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccc--hHHHHhh-hcCCCHHHHHHHHHHHHHHHHHhh-hccccc
Confidence            999999977653 2222221       134479999995  4443333 346889999999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||+. ++.++++|||++...
T Consensus       143 rDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1         143 RDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             SCCCGGGEEECTTCCEEECCCCC----
T ss_pred             ccCCccccccccccceeeechhhhhcc
Confidence            99999999995 688999999987644

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1e-20  Score=178.91  Aligned_cols=144  Identities=16%  Similarity=0.077  Sum_probs=103.7

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCc----EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEK----EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT  111 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~----~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~  111 (351)
                      -|++.+.||+|+||.||+|.+..+        |+    .||||.++....     .+                   . ..
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~--------~~~~~~~vavK~~~~~~~-----~~-------------------~-~~   56 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPE--------GEKVKIPVAIKELREATS-----PK-------------------A-NK   56 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC------------CCEEEEEEEECC---------C-------------------T-HH
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCC--------CCEEEEEEEEEEeccccC-----HH-------------------H-HH
Confidence            499999999999999999988555        54    578887754210     00                   0 11


Q ss_pred             HHHHHHHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccc
Q psy10135        112 WAEKEMRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVH  188 (351)
Q Consensus       112 ~aekE~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH  188 (351)
                      ...+|+..|.+|.+.+| ..-..+.....+++|+|+. .|.....+.  ...++...+..++.||+.+|.+|| .+||||
T Consensus        57 ~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e~~~-~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH-~~~iiH  134 (317)
T d1xkka_          57 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMP-FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-DRRLVH  134 (317)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCT-TCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH-HTTCCC
T ss_pred             HHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEEecc-CCcccccccccccCCCHHHHHHHHHHHHHHHHHHH-HcCccc
Confidence            23579999999977653 2222223355678888885 344333333  346888889999999999999999 599999


Q ss_pred             cCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        189 ADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       189 ~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||||.|||++ ++.++|+|||.|...
T Consensus       135 rDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_         135 RDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             SCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             CcchhhcceeCCCCCeEeeccccceec
Confidence            99999999995 689999999998643

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.7e-21  Score=176.81  Aligned_cols=146  Identities=14%  Similarity=0.065  Sum_probs=102.1

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|+|.+.||+|+||.||+|.+..+       .++.||||+++........    .                    ....+
T Consensus         8 ~Y~i~~~LG~G~fg~V~~a~~~~~-------~~~~vAiK~i~~~~~~~~~----~--------------------~~~~~   56 (305)
T d1blxa_           8 QYECVAEIGEGAYGKVFKARDLKN-------GGRFVALKRVRVQTGEEGM----P--------------------LSTIR   56 (305)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTT-------TTEEEEEEEEEEEBCTTSC----B--------------------CTHHH
T ss_pred             CEEEEEEEecccCeEEEEEEEECC-------CCEEEEEEEEehhhccchH----H--------------------HHHHH
Confidence            499999999999999999998443       1667999998753211000    0                    01235


Q ss_pred             HHHHHHHhh---hCCC-Ccccccc------ccceEEEEcccCccccc-cc-ccccCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        116 EMRNLTRMY---SEGL-NVPKPIL------LKSHVLLMTFIGEDGWP-AA-KLKDTPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       116 E~~nL~rL~---~~gi-~vP~pi~------~~~~vLVMEfig~~G~~-~~-~L~~~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      |+..|+.|.   +.+| ..-..+.      ....+++|||++ .|.. .. ......++...++.++.|++.+|.+|| .
T Consensus        57 E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH-~  134 (305)
T d1blxa_          57 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH-S  134 (305)
T ss_dssp             HHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEecc-CCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH-h
Confidence            777777764   3332 2111111      123579999995 2321 11 122345888899999999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|||||||||+|||+. .+.++|+|||.+...
T Consensus       135 ~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~  166 (305)
T d1blxa_         135 HRVVHRDLKPQNILVTSSGQIKLADFGLARIY  166 (305)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             CCEEecCCCccEEEEcCCCCeeecchhhhhhh
Confidence            9999999999999995 589999999998654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.4e-20  Score=176.29  Aligned_cols=149  Identities=20%  Similarity=0.215  Sum_probs=107.0

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+..+     ...|+.||||+++.....-.  ....   .++                 .+|
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~-----~~~g~~vAvK~i~~~~~~~~--~~~~---~~~-----------------~~E   78 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISG-----HDTGKLYAMKVLKKATIVQK--AKTT---EHT-----------------RTE   78 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSS-----TTTTCEEEEEEESEEEEEEE--ESSG---GGC-----------------CCH
T ss_pred             eEEEEEEecCCCeEEEEEEECcc-----CCCCcEEEEEEEehHHhccc--hHHH---HHH-----------------HHH
Confidence            99999999999999999986221     01288999999875321110  0000   012                 358


Q ss_pred             HHHHHHhhhC-CC-Ccccccc-ccceEEEEcccCccccccccccc-CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCC
Q psy10135        117 MRNLTRMYSE-GL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECVVMMWRLYNKCHLVHADLS  192 (351)
Q Consensus       117 ~~nL~rL~~~-gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLk  192 (351)
                      +.+|.+|.+. +| ..-..+. ....++||||+. .|.....+.. ..+++..+..++.||+.+|.+|| ++||||||||
T Consensus        79 ~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~-~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH-~~~ivHrDiK  156 (322)
T d1vzoa_          79 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYIN-GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIK  156 (322)
T ss_dssp             HHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCC-SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCC
T ss_pred             HHHHHhccCCCeEEEeeeeeccCCceeeeeeccc-ccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhh-cCCEEeccCC
Confidence            9999999763 43 1112222 245579999995 4444444432 45788889999999999999999 5999999999


Q ss_pred             CCceEEe-CCeEEEEEccccccC
Q psy10135        193 EYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       193 p~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |.|||++ +|.++|+|||.|...
T Consensus       157 p~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         157 LENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             GGGEEECTTSCEEESCSSEEEEC
T ss_pred             ccceeecCCCCEEEeeccchhhh
Confidence            9999995 689999999999654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.2e-20  Score=175.22  Aligned_cols=148  Identities=14%  Similarity=0.071  Sum_probs=99.9

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.....     .+.+..||||+++.....-.                       .......+|
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~-----~~~~~~vAiK~l~~~~~~~~-----------------------~~~~~~~~E   61 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAP-----SGKTVSVAVKCLKPDVLSQP-----------------------EAMDDFIRE   61 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECT-----TSCEEEEEEEC--------C-----------------------HHHHHHHHH
T ss_pred             eEEEEEEecCCCeEEEEEEEECC-----CCcEEEEEEEEEChhhcCCH-----------------------HHHHHHHHH
Confidence            89999999999999999976322     11134799999875321100                       011123578


Q ss_pred             HHHHHHhhhCCC-CccccccccceEEEEcccCcccccccccc--cCCCCHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPILLKSHVLLMTFIGEDGWPAAKLK--DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSE  193 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~~~~~vLVMEfig~~G~~~~~L~--~~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DLkp  193 (351)
                      +..|.+|.+.+| ..-..+.....+|||||+. .|.....+.  ...++...+..++.||+.+|.+|| .+|||||||||
T Consensus        62 i~~l~~l~H~nIv~~~g~~~~~~~~lv~e~~~-~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH-~~~iiHrDikp  139 (273)
T d1u46a_          62 VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAP-LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE-SKRFIHRDLAA  139 (273)
T ss_dssp             HHHHHHCCCTTBCCEEEEECSSSCEEEEECCT-TCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCG
T ss_pred             HHHHHhCCCCCEEEEEEEEeecchheeeeeec-CcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh-hCCEeeeeecH
Confidence            999999976653 2222222345689999996 343333222  245888999999999999999999 59999999999


Q ss_pred             CceEE-eCCeEEEEEccccccC
Q psy10135        194 YNMLV-HKATLFIIDVAQSVEH  214 (351)
Q Consensus       194 ~NILi-~~g~l~IIDFG~Av~~  214 (351)
                      .|||+ .++.++|+|||.|...
T Consensus       140 ~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_         140 RNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             GGEEEEETTEEEECCCTTCEEC
T ss_pred             HHhccccccceeeccchhhhhc
Confidence            99999 5789999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=2.8e-20  Score=174.51  Aligned_cols=147  Identities=20%  Similarity=0.154  Sum_probs=105.0

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++.+.||+|+||.||+|.....   .....++.||||+++....                         ........+
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~---~~~~~~~~vAvK~i~~~~~-------------------------~~~~~~~~~   65 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGL---LPYEPFTMVAVKMLKEEAS-------------------------ADMQADFQR   65 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETS---STTSSEEEEEEEECCTTCC-------------------------HHHHHHHHH
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCC---ccCCCCeEEEEEEEChhcC-------------------------hHHHHHHHH
Confidence            389999999999999999986321   0011267899999864211                         011223457


Q ss_pred             HHHHHHHhhhCCCC-cccccc-ccceEEEEcccCccccccccccc-------------------------CCCCHHHHHH
Q psy10135        116 EMRNLTRMYSEGLN-VPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-------------------------TPLTESGACK  168 (351)
Q Consensus       116 E~~nL~rL~~~gi~-vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-------------------------~~l~~~~~~~  168 (351)
                      |+.+|++|.+.++. .-..+. ....++||||+. .|.....+..                         ..++..++..
T Consensus        66 E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  144 (301)
T d1lufa_          66 EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMA-YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC  144 (301)
T ss_dssp             HHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCT-TCBHHHHHHHTCC----------------------CCCCHHHHHH
T ss_pred             HHHHHHhcCCCCcccceeeeccCCceEEEEEecC-CCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHH
Confidence            99999999776532 111111 145689999996 4443322211                         1367788899


Q ss_pred             HHHHHHHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccc
Q psy10135        169 LYRECVVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSV  212 (351)
Q Consensus       169 l~~qll~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av  212 (351)
                      ++.||+.+|.+|| .+|+|||||||.|||++ ++.++|+|||.|.
T Consensus       145 i~~qi~~gl~ylH-~~~ivHrDlKp~NILld~~~~~Kl~DFGls~  188 (301)
T d1lufa_         145 IARQVAAGMAYLS-ERKFVHRDLATRNCLVGENMVVKIADFGLSR  188 (301)
T ss_dssp             HHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             HHHHHHHHhhhcc-cCCeEeeEEcccceEECCCCcEEEccchhhe
Confidence            9999999999999 59999999999999995 5789999999985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.4e-20  Score=175.60  Aligned_cols=138  Identities=23%  Similarity=0.227  Sum_probs=102.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |.+.+.||+|+||.||+|..  +        |+.||||+++....                           .....+.|
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~--~--------g~~vAvK~~~~~~~---------------------------~~~~~e~e   47 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW--R--------GEEVAVKIFSSREE---------------------------RSWFREAE   47 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE--T--------TEEEEEEEECGGGH---------------------------HHHHHHHH
T ss_pred             EEEEEEEeeCCCeEEEEEEE--C--------CEEEEEEEECccch---------------------------hHHHHHHH
Confidence            66788999999999999986  3        88999999864210                           01112345


Q ss_pred             HHHHHHhhhCCCCccccccc--------cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHHh------
Q psy10135        117 MRNLTRMYSEGLNVPKPILL--------KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN------  182 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~--------~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH~------  182 (351)
                      +..+..+.+.+|-  +.+..        ...+|||||+. .|.....|...+++..+...+..+++.+|.++|.      
T Consensus        48 i~~~~~~~HpnIv--~~~~~~~~~~~~~~~~~lv~Ey~~-~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~  124 (303)
T d1vjya_          48 IYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSDYHE-HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ  124 (303)
T ss_dssp             HHTSTTCCCTTBC--CEEEEEEEECSSSEEEEEEEECCT-TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTT
T ss_pred             HHHHhhCCCCcCc--ceEEEEEeCCCcceEEEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            5555566554421  12221        13479999996 5666566666778888889999999999999994      


Q ss_pred             -hCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        183 -KCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       183 -~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                       ..|||||||||.|||++ ++.++|+|||+|...
T Consensus       125 ~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~  158 (303)
T d1vjya_         125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             CBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             cCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence             25999999999999994 689999999988644

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.3e-19  Score=170.72  Aligned_cols=149  Identities=15%  Similarity=0.098  Sum_probs=105.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++++.||+|+||.||+|.....   .....++.||||+++....                         ........+
T Consensus        24 ~~~l~~~iG~G~fg~Vy~a~~~~~---~~~~~~~~vAvK~i~~~~~-------------------------~~~~~~~~~   75 (311)
T d1t46a_          24 RLSFGKTLGAGAFGKVVEATAYGL---IKSDAAMTVAVKMLKPSAH-------------------------LTEREALMS   75 (311)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESS---SSTTCEEEEEEEEECTTCC-------------------------HHHHHHHHH
T ss_pred             HeEEeeEEeecCCeEEEEEEEecc---ccCCCCeEEEEEEECcccC-------------------------HHHHHHHHH
Confidence            378899999999999999975211   0011277999999875311                         011122346


Q ss_pred             HHHHHHHhh-hCCC-Cccccccc-cceEEEEcccCccccccccccc-------------------CCCCHHHHHHHHHHH
Q psy10135        116 EMRNLTRMY-SEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLKD-------------------TPLTESGACKLYREC  173 (351)
Q Consensus       116 E~~nL~rL~-~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~~-------------------~~l~~~~~~~l~~ql  173 (351)
                      |+..+.+|. +.+| ..-..+.. ...+|||||+. .|.....+..                   ..++..++..++.||
T Consensus        76 E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~-~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  154 (311)
T d1t46a_          76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC-YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV  154 (311)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT-TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCC-CCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHH
Confidence            888898883 4332 21111111 34689999996 4443333321                   247888899999999


Q ss_pred             HHHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        174 VVMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       174 l~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +.+|.+|| ..|+|||||||+|||++ ++.++|+|||.|...
T Consensus       155 ~~gl~~LH-~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~  195 (311)
T d1t46a_         155 AKGMAFLA-SKNCIHRDLAARNILLTHGRITKICDFGLARDI  195 (311)
T ss_dssp             HHHHHHHH-HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCT
T ss_pred             HHHHHHHH-hCCeeecccccccccccccCcccccccchheec
Confidence            99999999 59999999999999995 689999999999754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.6e-19  Score=169.32  Aligned_cols=151  Identities=15%  Similarity=0.104  Sum_probs=99.2

Q ss_pred             eeeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHH
Q psy10135         36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEK  115 (351)
Q Consensus        36 ~y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aek  115 (351)
                      -|++++.||+|+||.||+|..... .......+..||||+++.....                       ..  ......
T Consensus        14 ~~~l~~~iG~G~fg~Vy~~~~~~~-~~~~~~~~~~vAvK~~~~~~~~-----------------------~~--~~~~~~   67 (299)
T d1fgka_          14 RLVLGKPLGEGAFGQVVLAEAIGL-DKDKPNRVTKVAVKMLKSDATE-----------------------KD--LSDLIS   67 (299)
T ss_dssp             GEEEEEECC-----CEEEEEEECC-----CCCEEEEEEECCCTTCCH-----------------------HH--HHHHHH
T ss_pred             HeEEeeEEeecCCcEEEEEEEcCC-CcccccCceEEEEEEECcccCh-----------------------HH--HHHHHH
Confidence            489999999999999999986332 0000111357999998752210                       00  112345


Q ss_pred             HHHHHHHh-hhCCC-Ccccccc-ccceEEEEcccCccccccccccc-----------------CCCCHHHHHHHHHHHHH
Q psy10135        116 EMRNLTRM-YSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLKD-----------------TPLTESGACKLYRECVV  175 (351)
Q Consensus       116 E~~nL~rL-~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~~-----------------~~l~~~~~~~l~~qll~  175 (351)
                      |...+.++ .+.+| ..-..+. ....++||||+. .|.....+..                 ..++..++..++.||+.
T Consensus        68 e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~-~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~  146 (299)
T d1fgka_          68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS-KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR  146 (299)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCT-TCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCeEEecccccccCCeEEEEEEccC-CCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHH
Confidence            78888888 34432 2222221 244689999995 4443333321                 24788899999999999


Q ss_pred             HHHHHHhhCCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        176 MMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       176 ~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      +|.+|| .+|||||||||.|||++ ++.++|+|||.|...
T Consensus       147 al~ylH-~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~  185 (299)
T d1fgka_         147 GMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI  185 (299)
T ss_dssp             HHHHHH-HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCG
T ss_pred             HHHHhh-hCCEEeeeecccceeecCCCCeEeccchhhccc
Confidence            999999 59999999999999995 689999999998744

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7.9e-20  Score=169.02  Aligned_cols=138  Identities=18%  Similarity=0.147  Sum_probs=101.8

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.++||+|+||.||+|.. .         |..||||+++.+..                            .....+|
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~-~---------~~~vAvK~i~~~~~----------------------------~~~~~~E   50 (262)
T d1byga_           9 LKLLQTIGKGEFGDVMLGDY-R---------GNKVAVKCIKNDAT----------------------------AQAFLAE   50 (262)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-T---------TEEEEEEECCCCC------------------------------HHHHHT
T ss_pred             eEEeEEEecCCCeEEEEEEE-C---------CeEEEEEEECcHHH----------------------------HHHHHHH
Confidence            78899999999999999987 3         78999999875310                            0112468


Q ss_pred             HHHHHHhhhCCCC-ccccc-cc-cceEEEEcccCccccccccccc---CCCCHHHHHHHHHHHHHHHHHHHhhCCccccC
Q psy10135        117 MRNLTRMYSEGLN-VPKPI-LL-KSHVLLMTFIGEDGWPAAKLKD---TPLTESGACKLYRECVVMMWRLYNKCHLVHAD  190 (351)
Q Consensus       117 ~~nL~rL~~~gi~-vP~pi-~~-~~~vLVMEfig~~G~~~~~L~~---~~l~~~~~~~l~~qll~~L~~LH~~~glVH~D  190 (351)
                      +..|.+|.+.+|. .-... .. ...+|||||+. .|.....|..   ..++...+..++.||+.+|.+|| ..+|||||
T Consensus        51 ~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~-~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH-~~~ivH~d  128 (262)
T d1byga_          51 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA-KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRD  128 (262)
T ss_dssp             HHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT-TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HTTCCCSC
T ss_pred             HHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc-cCceeccc
Confidence            8899988766532 11111 11 23589999996 4544444432   24788889999999999999999 59999999


Q ss_pred             CCCCceEEe-CCeEEEEEccccccC
Q psy10135        191 LSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       191 Lkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      |||.|||+. ++.++|+|||.|...
T Consensus       129 lkp~Nil~~~~~~~kl~dfg~s~~~  153 (262)
T d1byga_         129 LAARNVLVSEDNVAKVSDFGLTKEA  153 (262)
T ss_dssp             CSGGGEEECTTSCEEECCCCC----
T ss_pred             cchHhheecCCCCEeecccccceec
Confidence            999999995 689999999999754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.4e-19  Score=167.05  Aligned_cols=146  Identities=16%  Similarity=0.097  Sum_probs=101.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      ..+.+.||+|+||.||+|....+     .+....||||+++....                       ...  .....+|
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~-----~~~~~~vAvK~~~~~~~-----------------------~~~--~~~~~~E   78 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDN-----DGKKIHCAVKSLNRITD-----------------------IGE--VSQFLTE   78 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC---------CEEEEEEEECCCCC-----------------------HHH--HHHHHHH
T ss_pred             eccceEEeecCCeEEEEEEEECC-----CCEEEEEEEEEECcccC-----------------------HHH--HHHHHHH
Confidence            45578999999999999987432     01134689998864110                       001  1123578


Q ss_pred             HHHHHHhhhCCC-Ccccccc-c-cceEEEEcccCccccccccccc--CCCCHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-L-KSHVLLMTFIGEDGWPAAKLKD--TPLTESGACKLYRECVVMMWRLYNKCHLVHADL  191 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~-~~~vLVMEfig~~G~~~~~L~~--~~l~~~~~~~l~~qll~~L~~LH~~~glVH~DL  191 (351)
                      +..|.+|.+.+| ..-.... . +..++||||+. .|.....+..  ..++...+..++.|++.+|.++| ..|||||||
T Consensus        79 ~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~-~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH-~~~iiHrDL  156 (311)
T d1r0pa_          79 GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK-HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-SKKFVHRDL  156 (311)
T ss_dssp             HHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT-TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCC
T ss_pred             HHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee-cCchhhhhccccccchHHHHHHHHHHHHHhhhhhc-ccCcccCCc
Confidence            999999977653 2211111 1 34579999995 3332222222  23666778899999999999999 599999999


Q ss_pred             CCCceEEe-CCeEEEEEccccccC
Q psy10135        192 SEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       192 kp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ||.|||++ ++.++|+|||.|...
T Consensus       157 K~~NILl~~~~~~kL~DFG~~~~~  180 (311)
T d1r0pa_         157 AARNCMLDEKFTVKVADFGLARDM  180 (311)
T ss_dssp             SGGGEEECTTCCEEECSSGGGCCT
T ss_pred             cHHhEeECCCCCEEEecccchhhc
Confidence            99999995 588999999999754

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=5.4e-19  Score=167.96  Aligned_cols=143  Identities=17%  Similarity=0.166  Sum_probs=101.5

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |+|.+.||+|+||.||+|.+..+        |+.||||+++....                           ..-...+|
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~--------g~~vAvKvi~~~~~---------------------------~~~~~~~E   59 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVN--------NTHVAMKIVRGDKV---------------------------YTEAAEDE   59 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT--------TEEEEEEEECSCHH---------------------------HHHHHHHH
T ss_pred             EEEEEEEeeCCCeEEEEEEECCC--------CCEEEEEEEecccc---------------------------chHHHHHH
Confidence            99999999999999999999677        99999999975311                           11123567


Q ss_pred             HHHHHHhhhCCCC---------ccccccc------cceEEEEcccCccccccc---ccccCCCCHHHHHHHHHHHHHHHH
Q psy10135        117 MRNLTRMYSEGLN---------VPKPILL------KSHVLLMTFIGEDGWPAA---KLKDTPLTESGACKLYRECVVMMW  178 (351)
Q Consensus       117 ~~nL~rL~~~gi~---------vP~pi~~------~~~vLVMEfig~~G~~~~---~L~~~~l~~~~~~~l~~qll~~L~  178 (351)
                      +..|+++.+..+.         +...+..      ...+++|.+....+....   ......++...++.++.||+.+|.
T Consensus        60 i~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~  139 (362)
T d1q8ya_          60 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD  139 (362)
T ss_dssp             HHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHH
Confidence            8888888654321         2222211      122456665532221111   112235788889999999999999


Q ss_pred             HHHhhCCccccCCCCCceEEeC-C------eEEEEEccccccC
Q psy10135        179 RLYNKCHLVHADLSEYNMLVHK-A------TLFIIDVAQSVEH  214 (351)
Q Consensus       179 ~LH~~~glVH~DLkp~NILi~~-g------~l~IIDFG~Av~~  214 (351)
                      +||+.+|||||||||+|||+.. +      .++++|||.|...
T Consensus       140 ~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~  182 (362)
T d1q8ya_         140 YMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY  182 (362)
T ss_dssp             HHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred             HHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccc
Confidence            9996589999999999999952 2      5999999999755

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.6e-19  Score=168.61  Aligned_cols=148  Identities=18%  Similarity=0.130  Sum_probs=103.7

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+.||+|+||.||+|.+...   .....+..||||+++.... .                        .......+|
T Consensus        22 ~~l~~~lG~G~fG~Vy~a~~~~~---~~~~~~~~VAvK~~~~~~~-~------------------------~~~~~~~~E   73 (308)
T d1p4oa_          22 ITMSRELGQGSFGMVYEGVAKGV---VKDEPETRVAIKTVNEAAS-M------------------------RERIEFLNE   73 (308)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEEE---ETTEEEEEEEEEECCTTSC-H------------------------HHHHHHHHH
T ss_pred             eEEeeEEeeCCCeEEEEEEECCc---ccCCCCcEEEEEEECcccC-h------------------------HHHHHHHHH
Confidence            78899999999999999986311   0001157899998864210 0                        111224578


Q ss_pred             HHHHHHhhhCCC-Ccccccc-ccceEEEEcccCcccccccccc-----------cCCCCHHHHHHHHHHHHHHHHHHHhh
Q psy10135        117 MRNLTRMYSEGL-NVPKPIL-LKSHVLLMTFIGEDGWPAAKLK-----------DTPLTESGACKLYRECVVMMWRLYNK  183 (351)
Q Consensus       117 ~~nL~rL~~~gi-~vP~pi~-~~~~vLVMEfig~~G~~~~~L~-----------~~~l~~~~~~~l~~qll~~L~~LH~~  183 (351)
                      +.+|.++.+.+| ..-..+. ....+|||||+. +|.....+.           ...++...+..++.+++.+|.+|| .
T Consensus        74 ~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH-~  151 (308)
T d1p4oa_          74 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMT-RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN-A  151 (308)
T ss_dssp             HHHGGGCCCTTBCCEEEEECSSSSCEEEEECCT-TCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHcCCCCEeeeeeEEecCCceeEEEeecC-CCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh-h
Confidence            999999876653 2211111 145689999996 443322221           123577788899999999999999 5


Q ss_pred             CCccccCCCCCceEEe-CCeEEEEEccccccC
Q psy10135        184 CHLVHADLSEYNMLVH-KATLFIIDVAQSVEH  214 (351)
Q Consensus       184 ~glVH~DLkp~NILi~-~g~l~IIDFG~Av~~  214 (351)
                      ++||||||||.|||++ ++.++|+|||+|...
T Consensus       152 ~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~  183 (308)
T d1p4oa_         152 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  183 (308)
T ss_dssp             TTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred             CCeeeceEcCCceeecCCceEEEeecccceec
Confidence            9999999999999996 578999999999643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.6e-19  Score=168.52  Aligned_cols=142  Identities=20%  Similarity=0.147  Sum_probs=101.1

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCc--EEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEK--EFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE  114 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~--~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~ae  114 (351)
                      |++.++||+|+||.||+|.+..+        |.  .||||.++....  .+                       ......
T Consensus        12 ~~~~~~iG~G~fg~Vy~~~~~~~--------~~~~~vaiK~~~~~~~--~~-----------------------~~~~~~   58 (309)
T d1fvra_          12 IKFQDVIGEGNFGQVLKARIKKD--------GLRMDAAIKRMKEYAS--KD-----------------------DHRDFA   58 (309)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEET--------TEEEEEEEEEEECC-------------------------------CHHH
T ss_pred             cEEEEEEeeCCCcEEEEEEECCC--------CeEEEEEEEEECcccC--hH-----------------------HHHHHH
Confidence            68899999999999999988544        55  467776653210  00                       001135


Q ss_pred             HHHHHHHHh-hhCCC-Cccccccc-cceEEEEcccCcccccccccc-----------------cCCCCHHHHHHHHHHHH
Q psy10135        115 KEMRNLTRM-YSEGL-NVPKPILL-KSHVLLMTFIGEDGWPAAKLK-----------------DTPLTESGACKLYRECV  174 (351)
Q Consensus       115 kE~~nL~rL-~~~gi-~vP~pi~~-~~~vLVMEfig~~G~~~~~L~-----------------~~~l~~~~~~~l~~qll  174 (351)
                      +|+.+|.+| .+.+| .+-..+.. ...+|||||+. .|.....|.                 ...++..++..++.||+
T Consensus        59 ~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~-~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia  137 (309)
T d1fvra_          59 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP-HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA  137 (309)
T ss_dssp             HHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT-TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecC-CCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHH
Confidence            689999988 34432 22222222 44689999996 444433332                 13578888999999999


Q ss_pred             HHHHHHHhhCCccccCCCCCceEEe-CCeEEEEEcccccc
Q psy10135        175 VMMWRLYNKCHLVHADLSEYNMLVH-KATLFIIDVAQSVE  213 (351)
Q Consensus       175 ~~L~~LH~~~glVH~DLkp~NILi~-~g~l~IIDFG~Av~  213 (351)
                      .+|.++| ..|||||||||.|||+. ++.++|+|||.|..
T Consensus       138 ~gl~~lH-~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~  176 (309)
T d1fvra_         138 RGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSRG  176 (309)
T ss_dssp             HHHHHHH-HTTEECSCCSGGGEEECGGGCEEECCTTCEES
T ss_pred             HHHHhhh-cCCccccccccceEEEcCCCceEEcccccccc
Confidence            9999999 59999999999999995 68999999999864

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=7e-12  Score=117.79  Aligned_cols=171  Identities=12%  Similarity=0.130  Sum_probs=105.4

Q ss_pred             ecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHHHhh
Q psy10135         45 TGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMY  124 (351)
Q Consensus        45 ~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~rL~  124 (351)
                      .|-+..||++.. .+        |..|++|+++++..+                           ......|+.+|..|.
T Consensus        32 ~s~EN~vy~v~~-~d--------g~~~VlK~~rp~~~s---------------------------~~~i~~E~~~l~~L~   75 (325)
T d1zyla1          32 NSYENRVYQFQD-ED--------RRRFVVKFYRPERWT---------------------------ADQILEEHQFALQLV   75 (325)
T ss_dssp             CCSSSEEEEECC-TT--------CCCEEEEEECTTTSC---------------------------HHHHHHHHHHHHHHH
T ss_pred             ccccceeEEEEc-CC--------CCEEEEEEeCCCCCC---------------------------HHHHHHHHHHHHHHH
Confidence            466899999988 66        899999999984211                           111346899999999


Q ss_pred             hCCCCccccccc---------cceEEEEcccCccccccc---------------cccc----------CC----------
Q psy10135        125 SEGLNVPKPILL---------KSHVLLMTFIGEDGWPAA---------------KLKD----------TP----------  160 (351)
Q Consensus       125 ~~gi~vP~pi~~---------~~~vLVMEfig~~G~~~~---------------~L~~----------~~----------  160 (351)
                      ..|++||.|+..         ...+.|++|++  |.+..               ++..          ..          
T Consensus        76 ~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~--G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~  153 (325)
T d1zyla1          76 NDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG--GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEP  153 (325)
T ss_dssp             HTTCSBCCCCCBTTBSCEEETTEEEEEEECCC--CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHH
T ss_pred             hcCCCCCCceecCCCeeeeeeeEEEEEEeecC--CcCCCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhh
Confidence            999999999865         23467999995  43211               0000          00          


Q ss_pred             ---------CCHH---HHHHHHHHHHHHHHHHH---hhCCccccCCCCCceEEeCCeEEEEEccccccCCCCChHHHHHh
Q psy10135        161 ---------LTES---GACKLYRECVVMMWRLY---NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRK  225 (351)
Q Consensus       161 ---------l~~~---~~~~l~~qll~~L~~LH---~~~glVH~DLkp~NILi~~g~l~IIDFG~Av~~~~p~a~~fl~~  225 (351)
                               ++..   ....+..+++..+....   ...++||+|++|.|||++++ ..+|||+.|+.       .+...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~~-~~~IDFdd~~~-------g~~~~  225 (325)
T d1zyla1         154 RKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG-PMFVDLDDARN-------GPAVQ  225 (325)
T ss_dssp             HHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESSS-EEECCCTTCCE-------ECTTH
T ss_pred             HHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCceeecCCCCcccEEEeCC-ceEEechhccc-------CcHHH
Confidence                     1111   11222333333333332   13579999999999999876 56899999963       22233


Q ss_pred             hhhhhhhccccCCCCCcHHHHHHhhhhcCCCCccccc
Q psy10135        226 DCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDE  262 (351)
Q Consensus       226 D~~~v~~ff~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (351)
                      |+.....+...++ ....+.++++|.+..+.+.+++.
T Consensus       226 DLa~~l~~~~~~~-~~~~~~~l~GY~~~~~l~~~el~  261 (325)
T d1zyla1         226 DLWMLLNGDKAEQ-RMQLETIIEAYEEFSEFDTAEIG  261 (325)
T ss_dssp             HHHTTCCSSHHHH-HHHHHHHHHHHTTTSCCCGGGGG
T ss_pred             HHHHhccccccCH-HHHHHHHHHHHHhcCCCCHHHHH
Confidence            4433221111110 00167899999999887766655

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.11  E-value=8e-11  Score=108.95  Aligned_cols=174  Identities=16%  Similarity=0.190  Sum_probs=107.6

Q ss_pred             eeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHHH
Q psy10135         42 CISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT  121 (351)
Q Consensus        42 ~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL~  121 (351)
                      .|..|-....|+... .+        | .+++|++.... .    .                       .....|+..|.
T Consensus        25 ~i~~G~~N~ny~v~t-~~--------g-~yVLri~~~~~-~----~-----------------------~~l~~~~~~l~   66 (316)
T d2ppqa1          25 GIAEGVENSNFLLHT-TK--------D-PLILTLYEKRV-E----K-----------------------NDLPFFLGLMQ   66 (316)
T ss_dssp             EECC---EEEEEEEE-SS--------C-CEEEEEECC--------C-----------------------CHHHHHHHHHH
T ss_pred             cCCCCcccCeEEEEE-CC--------C-cEEEEEcCCCC-C----H-----------------------HHHHHHHHHHH
Confidence            466888899999987 43        4 59999986521 0    0                       01245788999


Q ss_pred             HhhhCCCCccccccccc----------eEEEEcccCccccccc---------------ccc----cC------CCCH---
Q psy10135        122 RMYSEGLNVPKPILLKS----------HVLLMTFIGEDGWPAA---------------KLK----DT------PLTE---  163 (351)
Q Consensus       122 rL~~~gi~vP~pi~~~~----------~vLVMEfig~~G~~~~---------------~L~----~~------~l~~---  163 (351)
                      .|...|++||.|+....          .+.++.++.  |....               .+.    ..      ....   
T Consensus        67 ~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (316)
T d2ppqa1          67 HLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE--GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGW  144 (316)
T ss_dssp             HHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC--CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHH
T ss_pred             hhhhccccccccceecCCCcceeeecccceeeeecc--cccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhc
Confidence            99999999999986522          234566663  22110               000    00      0000   


Q ss_pred             ---------------HHHHHHHHHHHHHHHHHH---hhCCccccCCCCCceEEeCCeE-EEEEccccccCCCCChHHHHH
Q psy10135        164 ---------------SGACKLYRECVVMMWRLY---NKCHLVHADLSEYNMLVHKATL-FIIDVAQSVEHDHPHALQFLR  224 (351)
Q Consensus       164 ---------------~~~~~l~~qll~~L~~LH---~~~glVH~DLkp~NILi~~g~l-~IIDFG~Av~~~~p~a~~fl~  224 (351)
                                     ......+..+...+...+   -..|+||+|+++.|||++++++ .||||+.|       +..++-
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~-------~~~~~~  217 (316)
T d2ppqa1         145 KVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA-------CNDLLA  217 (316)
T ss_dssp             HHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC-------EEEEHH
T ss_pred             chhhhHHHHhhhhcchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccc-------ccchhh
Confidence                           011122223333333322   1468999999999999988775 79999999       567888


Q ss_pred             hhhhhhhhccc--cCCCCC-c-HHHHHHhhhhcCCCCccccc
Q psy10135        225 KDCDNVTVFVI--LNPVSD-D-DEKIFKKWDSDYVTSSDEDE  262 (351)
Q Consensus       225 ~D~~~v~~ff~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~~  262 (351)
                      .|++-...+|.  .+..+. + ...++++|++..+.++++.+
T Consensus       218 ~DLAi~~~~~~~~~~~~~~~~~~~afl~GY~~~rpLs~~E~~  259 (316)
T d2ppqa1         218 YDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELE  259 (316)
T ss_dssp             HHHHHHHHHHSBCTTSCBCHHHHHHHHHHHHTTSCCCHHHHH
T ss_pred             hhHHHHHHHHhhcchhhhHHHHHHHHHHHHHhcCCCCHHHHH
Confidence            99976665542  232333 2 68999999999998877665

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.08  E-value=1.8e-10  Score=102.93  Aligned_cols=134  Identities=19%  Similarity=0.151  Sum_probs=87.3

Q ss_pred             eeecceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHH
Q psy10135         37 SEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKE  116 (351)
Q Consensus        37 y~I~~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE  116 (351)
                      |++.+..+-|+.+.||+...  +        +..++||+.........                          ....+|
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~--~--------~~~~vlk~~~~~~~~~~--------------------------~~~~~E   59 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVG--E--------NENLYLKMTDSRYKGTT--------------------------YDVERE   59 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEEC--S--------SCEEEEEEECGGGTTST--------------------------TCHHHH
T ss_pred             eEEEEcCCCCCCCcEEEEEe--C--------CCeEEEEEcCCCcccch--------------------------hhHHHH
Confidence            34444444555679999865  3        67889998764211000                          012467


Q ss_pred             HHHHHHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHH-----------
Q psy10135        117 MRNLTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY-----------  181 (351)
Q Consensus       117 ~~nL~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH-----------  181 (351)
                      ...|..|.. +++||+++..    +..++||+++  .|.++....   .+......++.++...++.||           
T Consensus        60 ~~~l~~l~~-~vpvP~vl~~~~~~~~~~lv~~~l--~G~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~  133 (263)
T d1j7la_          60 KDMMLWLEG-KLPVPKVLHFERHDGWSNLLMSEA--DGVLCSEEY---EDEQSPEKIIELYAECIRLFHSIDISDCPYTN  133 (263)
T ss_dssp             HHHHHHHTT-TSCCCCEEEEEEETTEEEEEEECC--SSEEHHHHT---TTCSCHHHHHHHHHHHHHHHHTSCCTTCSCBC
T ss_pred             HHHHHHHhc-cCCCCcEEEEEecCCceEEEEEec--ccccccccc---cccccHHHHHHHHHHHHHHHhccCccccccCc
Confidence            888888754 6899999864    3458999999  465432211   111223445666666666666           


Q ss_pred             -----------------------------------------------hhCCccccCCCCCceEEeCCeE-EEEEccccc
Q psy10135        182 -----------------------------------------------NKCHLVHADLSEYNMLVHKATL-FIIDVAQSV  212 (351)
Q Consensus       182 -----------------------------------------------~~~glVH~DLkp~NILi~~g~l-~IIDFG~Av  212 (351)
                                                                     ....++|+|++|.|||++++++ .||||+.|.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         134 SLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             chhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                                                           0123899999999999998876 599999885

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=99.04  E-value=4.2e-10  Score=100.03  Aligned_cols=126  Identities=17%  Similarity=0.139  Sum_probs=84.4

Q ss_pred             eeeecC-ceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         42 CISTGK-EANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        42 ~Ig~G~-~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      .+..|. .+.||+... .+        |..+++|+.+.....                             ....|...|
T Consensus        17 ~~~~G~s~~~v~r~~~-~~--------~~~~vlK~~~~~~~~-----------------------------~l~~E~~~l   58 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QG--------RPVLFVKTDLSGALN-----------------------------ELQDEAARL   58 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TT--------SCCEEEEEECSCTTS-----------------------------CHHHHHHHH
T ss_pred             EcCCcccCCeEEEEEe-CC--------CCEEEEEeCCccCHh-----------------------------HHHHHHHHH
Confidence            334443 578999987 55        777999987653110                             024688889


Q ss_pred             HHhhhCCCCccccccc----cceEEEEcccCcccccccccccCCCCHHHHHHHHHHHHHHHHHHH---------------
Q psy10135        121 TRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY---------------  181 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~----~~~vLVMEfig~~G~~~~~L~~~~l~~~~~~~l~~qll~~L~~LH---------------  181 (351)
                      ..|...|+++|+++..    +..++||+|+  .|.++..   ..+...   .+..++...|+.||               
T Consensus        59 ~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i--~G~~~~~---~~~~~~---~~~~~l~~~la~LH~~~~~~~~~~~~~~~  130 (255)
T d1nd4a_          59 SWLATTGVPCAAVLDVVTEAGRDWLLLGEV--PGQDLLS---SHLAPA---EKVSIMADAMRRLHTLDPATCPFDHQAKH  130 (255)
T ss_dssp             HHHHTTTCCBCCEEEEEECSSCEEEEEECC--SSEETTT---SCCCHH---HHHHHHHHHHHHHTTSCGGGCCCBCCHHH
T ss_pred             HHHHhcCCCCCceeeecccccceEEEEEee--ecccccc---ccccHH---HHHHHHHHHHHHHccCChhhCCCcccchh
Confidence            9999999999999864    4568999999  4644321   112211   22334444455554               


Q ss_pred             ------------------------------------h------hCCccccCCCCCceEEeCCe-EEEEEcccccc
Q psy10135        182 ------------------------------------N------KCHLVHADLSEYNMLVHKAT-LFIIDVAQSVE  213 (351)
Q Consensus       182 ------------------------------------~------~~glVH~DLkp~NILi~~g~-l~IIDFG~Av~  213 (351)
                                                          .      ...+||+|++|.|||+.+++ +.||||+.+..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         131 RIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                                                1      12389999999999998877 56999999853

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.72  E-value=9.8e-09  Score=98.63  Aligned_cols=80  Identities=24%  Similarity=0.227  Sum_probs=49.3

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..||.|....||++.+..+        |+.++||...+.....        |+         .-+.-.-+  +..|++.|
T Consensus        32 ~eig~G~~N~vfrV~~~~~--------~~svivKqa~p~~r~~--------g~---------~~~~~~~R--~~~E~~~L   84 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEH--------DRALIIKQAVPYAKVV--------GE---------SWPLTIDR--ARIESSAL   84 (392)
T ss_dssp             EECCSSSSEEEEEEEC------------CEEEEEEECCGGGC----------C---------CCCCCTTH--HHHHHHHH
T ss_pred             EEeCCCceEeEEEEEeCCC--------CeEEEEecCCchhccc--------CC---------CCCCCHHH--HHHHHHHH
Confidence            4689999999999987444        7899999765522111        10         00000011  24588888


Q ss_pred             HHhhhC-CCCccccccc--cceEEEEcccC
Q psy10135        121 TRMYSE-GLNVPKPILL--KSHVLLMTFIG  147 (351)
Q Consensus       121 ~rL~~~-gi~vP~pi~~--~~~vLVMEfig  147 (351)
                      ..+... ...+|+++..  ...++||||++
T Consensus        85 ~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~  114 (392)
T d2pula1          85 IRQGEHVPHLVPRVFYSDTEMAVTVMEDLS  114 (392)
T ss_dssp             HHHHTTCGGGSCCEEEEETTTTEEEECCCT
T ss_pred             HHhhhhCCCCcceEEEEcCCCCEEEEeccC
Confidence            887654 2568888754  45689999995

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.26  E-value=8.1e-07  Score=84.55  Aligned_cols=80  Identities=14%  Similarity=0.029  Sum_probs=54.9

Q ss_pred             ceeeecCceEEEEEEeCCCcccccccCCcEEEEEEeeCCchhhhhccccccccccccccccCCChhHHHHHHHHHHHHHH
Q psy10135         41 GCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNL  120 (351)
Q Consensus        41 ~~Ig~G~~a~VY~a~~~~~~~~~~~~~g~~vAIKi~k~s~~~fk~~~~yv~ge~Rfr~~~~k~n~r~~vk~~aekE~~nL  120 (351)
                      ..|+.|-...+|++..... .......+..|+++|+-. ...+.                           ...+|+.++
T Consensus        48 ~~l~GGltN~~y~v~~~~~-~~~~~~~~~~vllRi~g~-~~~~i---------------------------dr~~E~~i~   98 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEV-YPPIRNEPNKVLLRVYFN-PETES---------------------------HLVAESVIF   98 (395)
T ss_dssp             EEECCCTTEEEEEEEECTT-SCCSSSCCSEEEEEEECS-CCCHH---------------------------HHHHHHHHH
T ss_pred             EEcCCccccceEEEEeCCC-CccccCCCCcEEEEecCC-cchhh---------------------------HHHHHHHHH
Confidence            6889999999999986221 000001145688888742 11111                           124699999


Q ss_pred             HHhhhCCCCccccccccceEEEEcccCccccc
Q psy10135        121 TRMYSEGLNVPKPILLKSHVLLMTFIGEDGWP  152 (351)
Q Consensus       121 ~rL~~~gi~vP~pi~~~~~vLVMEfig~~G~~  152 (351)
                      +.|...|+ +|+++......+||||+  +|..
T Consensus        99 ~~ls~~gl-~Pkll~~~~~g~I~efi--~g~~  127 (395)
T d1nw1a_          99 TLLSERHL-GPKLYGIFSGGRLEEYI--PSRP  127 (395)
T ss_dssp             HHHHHTTS-SSCEEEEETTEEEECCC--CEEE
T ss_pred             HHHHhCCC-CCeEEEEcCCceEEEEe--cccc
Confidence            99999998 79999988889999999  4543